core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	935658	936866	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	1	1209	GCA_003443955_1_1_861	GCA_003443955_1_1_861	+	1839052	.	COG4536	Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains [Inorganic ion transport and metabolism]. 	MPRPRTQNLANLSFVSIAIFTVSVAAIFIPSTAFAAFELGGTPTNLALLIFFICLSLVVSFLCSISEATLLTMTPSYIDTLEEDNPKGAALLKSVKVDHIEKSISAILTLNTVAHTLGSLGAGAQAVIVFGNAWFGVFSGVMTLIILIGTEIIPKTIGTVYWRRFAMPVAYYVRTINVALLPVIWVTEKISRMLTRGNQEIGFNRHEFLALANQGESLGQMSEMETRIIKNSLALGMINVEDILTPRSVVSAFDENMTVGDVFASYPKLPFSRFPIFDEDLDNATGFILKSDLLIAKANQEIHTPIKQFRRDINFVFAKMKLFDLLDLMLKEQVHIALAVGEFGEVKGLVSLEDVLETLLGLEIVDEFDRVDDMQILARQLMDKRMARLGAKLEEDAPFDEK*	mmseqs_cdd	nonviral_gene	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0001	persistent	direct	high	1208	0.999	GCA_003443955.1_00874
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	936972	937577	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	1315	1920	GCA_003443955_1_1_862	GCA_003443955_1_1_862	+	1839052	.	PF13474.6	SnoaL-like domain	MAYSFIDKYIEYKGWFMKYSTRSVLRKAVAASMLTAVIRSAIQLTGKSFGKGASIGLFIGMIGVQSLITTNAYAISEQDVSRYASSMSSAANAQNIAQISRLIDDDAIISLSRGGKTTSLDKEGYLQLLQKSWATSSDYRYRINVADVVVTGNQARAQIVTTETWTQDGKPVTIKTASRATFSQVGNNAVLLRSVSQVTVD*	hhsuite_tools	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0002	persistent	direct	moderate	557	0.919	GCA_003443955.1_00875
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	937772	940642	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	2115	4985	GCA_003443955_1_1_863	GCA_003443955_1_1_863	+	1839052	.	PDB:5EMI_A	Cell-wall-hydrolase-autolysin	MKKHTKSSISTQILKPLSLAISSCILVACSSTGTPAKPVSQTPKPIPQAKPSQQINISSGNTNLGNTKTGADVDVLDVQMLDALEALLQATDMSMVEGDELAIQRYGNLWDRVRRGYRINEMTNARIEAQKSWFYTRQTYLDRLTARASRYLHHTVAEAERRGIPSELALLPIIESSYDPTATSNAAAAGLWQFIPSTGRIYGLNQSATYDGRRDVIESTRAAYDFLTSLYNQFGSWELALAAYNAGPGRVSRAIKANQDQGLPTDYWSLKLPTETMNYVPRFLAVAQIVRSPNTYGINLPAIANHSHFRTVPVNYGVSLSEVATVTGLSVSELRLLNPALLNFTVDEIGPNRIVIPDSLPNQIDNQLASLKGYGFGGDYIATAPAQSITYVVPKSGATANTSSQQELIAANTLPTTIAQVTPNNTIVQEPALSKSEINLIAAEIQKTSPEVPAISPQDGNIQLNAVQTGQSVLDARGETKMLSFADGPKTQAVAQQPIQPVQVAVTPPAQPVQITVVSPTPEPISQPKPQLPPVTASIPVVSSPPVLVPPLPSRPRPEPASRPKPKPESYTVRAGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKRQPVSAQTPSRQSTSTANTNSATHKVSAGESLTAIARKYNISLHALAKENGLSVTDGVLIGQTLKLPSDAKTANTTMANTSSSPSVNKPESYTVRAGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKRQPVSAQQTSQATQPTKNNQSTATHRVQSGESLTAIARRYNISLHTLAKENGLSVTDGVLIGQTLKLPSDAKAESSTPSRLGNTKNNSTRTPANTNIGITENYTVRSGDSLTMLSNRFGVAIGDLATANGLASNANLRIGQTLKVPKLTTTYTVKAGDGLIALARRYGISTQELAKMNNLEPTADLRIGQVLTVPNK*	common_virus_hmm	common_virus	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0003	persistent	direct	high	2870	1.0	GCA_003443955.1_00876
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	940800	942632	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	5143	6975	GCA_003443955_1_1_864	GCA_003443955_1_1_864	-	1839052	.	COG1274	Phosphoenolpyruvate carboxykinase, GTP-dependent [Energy production and conversion]. 	MTAKITAPDFVRHQALIHWVAEIAALTKPAAIEWCDGSEEENQHLIDLMIKNGTMIKLNEDKHPNSYLAFSDPTDVARVEDRTYICSKEEIDAGATNNWVEPSQMRTKLNDLFDGCMAGRTMYVVPFSMGPLGSHIAHIGIEITDSPYVVVSMRKMARMGKEVYDVLGADGEYVPCVHTVGSPLTEGQKDVAWPCNDDKYIVHFPETREIWSYGSGYGGNALLGKKCLALRIASAMGREQGWLAEHMLILGVTNPQGKKHYIAAAFPSACGKTNFAMLIPPAGYEGWKVETVGDDIAWIKPSEDGKLYAINPEAGFFGVAPGTNTKTNSNCMSTLGSDVIYTNVAVTDDGEVWWEGKTKETPANLTNWKREPHTGAERAAHANARFTVSAKQCPSIDPQWENPEGVPISAFIFGGRRADTVPLVSEAFDWVDGVYKAATMGSETTAAATGQQGVVRRDPFAMLPFTGYNMADYFNHWLQMGENLGKKAKAAGNQLPKMFKVNWFRRDTNGDFVWPGFGQNMRVLQWIIERCEGTANAVRTPIGLVPTYDDINWDQSDFTKAQFELVTSQDKDAWIKELESHAELFDKLGERMPTALKAHNAKLKADIEQA*	mmseqs_cdd	nonviral_gene	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0004	persistent	direct	high	1832	0.999	GCA_003443955.1_00877
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	942930	944348	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	7273	8691	GCA_003443955_1_1_865	GCA_003443955_1_1_865	+	1839052	.	PDB:3BH0_A	Helicase-ATPase	MAKAKSSYICQNCGAIYGKWAGQCTDCGEWNTLVEAPNTSLPHHHKSKTTTAPRKTANYAGAVSAVMTLDHVGVTLETRMPTGIGEFDRVLGGGLVAGSVVLIGGDPGIGKSTILLQTAINMAAGDSLSGSALYITGEESLSQVAMRAVRLGLPTDRLRVLAETNVDTICAALTTEQPAIAVIDSIQTLFTEAIQSAPGGVAQIRESAAVLTRYAKQTGTALFLVGHVTKEGALAGPRVLEHMVDTVLYFEGESDSRFRMIRAIKNRFGAVNELGIFGMTDTGLKEVANPSAIFLSRYDKPIAGSVVMVSREGTRPLLVEVQALVDDSQGQPRRMALGLDYQRLSMLLAVMHRHGGIHTSGMDVYVNVVGGVKVMETGSDLAVLIACASSIKEKPLPVRLCVFGEVGLSGEIRPVPNGQERLKEAMKHGFTHAIVPRANAPAANHPQFKNIQIIAVDRLDEAIYQAFEINAG*	rep_hall_hmm	common_virus	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0005	persistent	direct	high	1418	0.999	GCA_003443955.1_00878
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	944390	945109	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	8733	9452	GCA_003443955_1_1_866	GCA_003443955_1_1_866	-	1839052	.	COG1118	ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]. 	MSIKIQNIHKTFGDFVALGEISIDISTGELTTLLGPSGCGKTTLLRIIAGLENADNGRIYFDSIDVTDIPVQHRGIGFVFQQYALFRHQTVAQNIAFGLTLLPRNTRPSANTIDRRVDELLDLVQLSHTKTRYPHELSGGQRQRVALARALATEPKLLLLDEPFGALDAKVRKSLRDSLKDIQREIGITSILVTHDQEEAQAISDKIVIMNHGQIEQIGTPSKLFAQPSSDFVVDFLGL*	mmseqs_cdd	nonviral_gene	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0006	persistent	direct	high	719	0.999	GCA_003443955.1_00879
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	945202	946041	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	9545	10384	GCA_003443955_1_1_867	GCA_003443955_1_1_867	-	1839052	.	COG4208	ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]. 	MSHTSSYSYQKNPATRDKPWVRWSLIGIAVVFMGVMLVVPLVSVFYEALKEGWQAYQAALLEPDALASIKLTLITAAIILPINTIIGVALAYLITRHQFRGKFVITTLLDLPFAVSPVVAGLMFVLVFGANTRLGGYLESMGIQVIFATTGIVLATLFVTFAFIARELIPLMQAQGDSEEQAALTLGANGWQMFWKVTLPNIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTVPLMIEIAYNEYAFTLAFALSSLLALLALITLVAQGLMSHKK*	mmseqs_cdd	nonviral_gene	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0007	persistent	direct	high	839	0.999	GCA_003443955.1_00880
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	946086	946964	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	10429	11307	GCA_003443955_1_1_868	GCA_003443955_1_1_868	-	1839052	.	TIGR02139	sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]	MLNQPIPLKNRARRVMPFFGLSMGISIFALGLLVILPFLMMILTTLQMSFDDIMQTIREPQVFAAIKLSLSMAMLATLTNLIFGTLAAWVLVRYEFWGKSFLNALVDLPFALPTAVTGIALATLYAPNGLFGQWFTHLGILLFNEPIKIAFTPIGIWLALVVVSFPFIVRAVQPVLAELSVEFEEAAAVMGAGRLTTFCRVILPEISPAMLIGAGMMFARATGEYGSVIFIAGNIPMQSEILPLIIVSKLEQFDVAGAACVSLFMLLISLVFLFTMNFIQWKLSARLGAKTN*	mmseqs_cdd	nonviral_gene	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0008	persistent	direct	high	878	0.999	GCA_003443955.1_00881
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	947314	947754	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	11657	12097	GCA_003443955_1_1_869	GCA_003443955_1_1_869	+	1839052	.	.	hypothetical protein	MMMKNKWMRGLAILVLSLPTVTYAKTAAPKASEAPEVSLTQEEQMAIDFCDFSAYGVMHIAGDHQGGATKSEALTNHDKRMAELKDLIDLDPETATMLDKYWKGAIDRIFQESVQKTDAEKQAFVMGVGESSFYSCLDQVLKTPKN*	.	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0009	persistent	direct	high	440	0.998	GCA_003443955.1_00882
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	947785	948960	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	12128	13303	GCA_003443955_1_1_870	GCA_003443955_1_1_870	+	1839052	.	PDB:1OYW_A	ATP-dependent-DNA-helicase	MTETTVKNFDDLPLSEPILKAVQALKFDQLTPIQAQILPHTLANQDAIGQAQTGTGKTATFLITIIESLLKRPFQADEIRYLGEPRALVLAPTRELAQQILADCHELTRFSQLYNLCITGGSDFDKQLEQLHKRPLDILIGTPGRIIDWVNKGELFLDRVEVFVLDEADRMLDMGFIPDIKRIVRHMPSNTERQSLLFSATFNQDVMNLAYRWLHQPAFVEIAPESKTNQAIDQQFYLVTEREKTSALKQILADDSVKKTIIFANRKDQVKRLYDYLRRHHKVTMLSGDVAQQKRERYLQRFKDGEVNVLVATDVAGRGIHVDDVTHVINYTLPDMPDDYVHRIGRTGRAGLSGVSISFVSENDAFNLPALERHIDQKFKLNQFEFLDEHK*	common_virus_hmm	common_virus	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0010	persistent	direct	high	1175	0.999	GCA_003443955.1_00883
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	948974	950149	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	13317	14492	GCA_003443955_1_1_871	GCA_003443955_1_1_871	+	1839052	.	COG0635	Coproporphyrinogen III oxidase or related Fe-S oxidoreductase [Coenzyme transport and metabolism]. 	MYPDLLDPAHIPLSLYIHMPWCVKKCPYCDFNSHALPSQVPFENYIEALLSDAVSQQSLVSNRQIDTVFIGGGTPSLLPIESFKRLFDGLRLIYDFAPTCEITLEANPGTLEHSPFDEYLTIGINRLSIGVQSFDHNALTVLGRIHNPDQASNAIRAARIAGFDRVNADLMYGLPNQNPSKAVNDIQTAIDAGATHLSWYQLTIEPNTTFYCTPPQLPDEEIMAEIETLGQSVLTKHGFYNYEVSAWHGPNDAPCQHNLNYWQFGDYLAIGAGAHGKLTLKNHPDYQDGIYRYQKSRQPKDYLAFEDAPKMVNFERISDDNLPFEFMMNALRLKDGVSTDVFETRTGLLISTIDNEMLPLQHQGLMVLDPLRIAPTRLGFRYVNYLVSQFI*	mmseqs_cdd	nonviral_gene	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0011	persistent	direct	high	1176	1.0	GCA_003443955.1_00884
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	950231	950371	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	14574	14714	GCA_003443955_1_1_872	GCA_003443955_1_1_872	-	1839052	.	COG5510	Predicted small secreted protein  [Function unknown]. 	MKKVLVASIAAVVVLTGCNAIKGFGKDVSKAGEAVSDTAQKVEKKI*	mmseqs_cdd	nonviral_gene	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0012	persistent	direct	high	140	0.993	GCA_003443955.1_00885
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	950619	951164	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	14962	15507	GCA_003443955_1_1_873	GCA_003443955_1_1_873	+	1839052	.	COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ribosomal structure and biogenesis]. 	MSQFSDALIHIVLFSPKIPNNTGSIIRLCANTGAQLHLVKPLGFELDDTRLKRAGLDYHEYATLSVHDNWQETKSALKSLGVERIVAMTTKFSRPFYEYQFKLDNDQHKVALVFGSETDGLPEEVRADIGANHWLRLPMLPDSRSLNLANSVGICLYEVWRQLGFVGDIGQSVGYHKPTSR*	mmseqs_cdd	nonviral_gene	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0013	persistent	direct	high	545	0.998	GCA_003443955.1_00886
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	951280	951495	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	15623	15838	GCA_003443955_1_1_874	GCA_003443955_1_1_874	-	1839052	.	.	hypothetical protein	MTDSTTSPARQKATNTYRQKALANIALVISHTEPHVLDALNQIMAHKDCSKAMAIKVALVEYANTLSQTSR*	.	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0014	shell	direct	high	215	0.995	GCA_003443955.1_00887
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	951898	952188	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	16241	16531	GCA_003443955_1_1_875	GCA_003443955_1_1_875	-	1839052	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MALECLDVHFSGLVADGEEIPLPTNFDAHTQNSQFDGMMWAWVAVDLSKYDVKSHKINITLPNHLIAKIDEKVAAHKSLYKSRSNYLAQLAMADLA*	mmseqs_cdd	nonviral_gene	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0015	shell	direct	high	290	0.997	GCA_003443955.1_00888
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	952513	952710	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	16856	17053	GCA_003443955_1_1_876	GCA_003443955_1_1_876	-	1839052	.	PFAM:PF16777.4	transcriptional-regulator	MPKIVANPKTRAQIQKDSDARRRVKPIGFKVPIEFAELLDELAKQSGKTKNIIIMEAVELWAKQL*	phrogs_hmm	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0016	persistent	direct	high	197	0.995	GCA_003443955.1_00889
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	953288	953725	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	17631	18068	GCA_003443955_1_1_877	GCA_003443955_1_1_877	+	1839052	.	6AF2_A	HIT domain-containing protein	MFQLHPTLAKDTFLVGDFPLSTVRLMNDCQFPWLILVPRVSGIKEIYELSAADQVQFLRESSWVSSQMAKIFGADKMNVAALGNQVLQLHFHHIVRYQNDAAWPNPVWGHEAMPYTQEVLSHMQQTLMMALRGHHQMPFDWKMDV*	hhsuite_tools	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0017	persistent	direct	high	437	0.998	GCA_003443955.1_00890
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	953879	954541	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	18222	18884	GCA_003443955_1_1_878	GCA_003443955_1_1_878	+	1839052	.	PRK00043	thiamine phosphate synthase. 	MTLQSIDKVPKLYLLTNDDELTTLLDKLERVFDTGAVSLLQVRRKSTLKLYDLATVYREAEMIVSLANDYDIKVVMNDSLELASHFGTGLHLGQRDGSVRVAREILGDHVVIGRTCHTDLALFKEAKREGATYGAMGTAFASITKPRAKIISKDILKKACELDFPLCVIGGITLENIHQLRDKLNGAAIDYIAVTADIMGYSVDTIADKCLAWQQKLNTW*	mmseqs_cdd	nonviral_gene	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0018	persistent	direct	high	662	0.998	GCA_003443955.1_00891
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	954546	958100	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	18889	22443	GCA_003443955_1_1_879	GCA_003443955_1_1_879	+	1839052	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MIDTFKPKLDLPTKANFKTTLPLLGGADLSFWLALAAKSEERLIVMIANHQNELNQLDTELSFFGIDAHVFPDWEILAYDQLSVHQDIISERIALLTRMPTTGVLLVSTQTLMQRIAPPSWLIGQHFDLAVGDKFDIHEQRLRLTKAGYVQTENVFEPGEFAVRGSIVDIFAVGQSLPFRLDLFDDNIETIKFFDPDSQRTLSDNDLAQLKKDAQAGMNTHHAQKLPSSAKITEFRLLPAREFPLEEGKEMFRQNFASLFPNASARKIEFYNDVMAAIAPQGIEFYAPLFFELDAWMKTGNLFSYLPDDTLVVSHDNLSACHDEYYQQIQARHHSRAHDKSLPIMPPDYLFLANNEFHQVLKAYPRVVINTNHDTAKIVAMESLPPPILPINHQAAKPLSELLSFIKSGQVPILLVAESAGRREIILELLKDKVAVKVVDNYQEFINNLDDFNTDCIALSVAPIERGLWLRDETGGLCIISETQIFGRQVLQTRRRRQSSVSQAFLIKSVTELTEGALVVHLEHGIGRYQGLVVLDVGEGEQEFIHLKYADDASIYVPITNLALIGRYSGSDLQTVSLSKIGSGKWEKAKLKALEQIHDVAAELLNVQARRNAKSGISFDIDMSQYELFASQFAFEETIDQAEAIHAVMHDMKQNKPMDRLICGDVGFGKTEVAMRAAFIAVQAGYQVAVLVPTTLLAGQHEDSFLNRFADWPIKIESLSRFGNKKHQDAILAGLADGTVDIVIGTHKLIQDDVKFKQLGLMIIDEEHRFGVRHKERIKALQTNIDSLSMTATPIPRTLNMALSGIQDISIIATPPARRLAIKTFLLPKSDETIKEAILREILRGGQVYYLHNDVASIEAAADTLRELVGEARVAVAHGQMNERELSVVMNDFYHKKFNVLVASTIIETGIDVPNANTIIIHRADKFGIAQLHQLRGRVGRSHHQAYCYLMVPSLKGLSSDAKKRLNAITRANTLGAGFMLASEDLEIRGAGEILGKEQSGNMQTIGFGLYMDMLERATNAIKQGKTPSLATPLDLVSDIDIHASALIPDEYLGDVHERLVFYKRISSLDDVNQLIDIRTEMIDRFGTLPTQTQNLFAVHRIRIRAKALGITKIDATQTTISIEFRADTPIDGLAIIKLIQSNDGYRMNGATAIRYTSQELMDTQARIDKVNELLLYFESTKTA*	common_virus_hmm	common_virus	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0019	persistent	direct	high	3554	1.0	GCA_003443955.1_00892
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	958097	958366	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	22440	22709	GCA_003443955_1_1_880	GCA_003443955_1_1_880	-	1839052	.	.	hypothetical protein	MPMSIPTKVTVGYTQRRLFMVSMTVGLISLSGCQHIQVTKSPIPIIIHSHTKSPSQPKPTPTDAVPTKNRPISPPTQKSNTIFILEDWF*	.	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0020	persistent	ambiguous	low	5	0.019	GCA_003443955.1_00892
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	958366	959628	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	22709	23971	GCA_003443955_1_1_881	GCA_003443955_1_1_881	-	1839052	.	TIGR02800	tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MKSPITKVCLALTISFSAALTHTYADDELIVISEQVAPSQYPVAVMPFSEAHQMSHYLSLAGLGTTHQNLPQHTQTNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEIIDTANGLVSVKHTQISDNHPASIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNKISSLKLIDPSGQLIRTLDTVNGSIITPTFSPDGLSIAYSVQTKNNLPIIYIVSVSGGTPKLVTPFWGHNLAPSFSPDGGSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPNYLADASGFIYTADKGTRRQSLYRYDFGTTHSTQIASYATNPRLSPDGSKLVYLSGGQIIIANTKGRIQQSFRVLGTDVSASFSPSGTRIIYTSNQGNKNQLMIRSLSSNAIRTIPTSGTVRDPIWSK*	mmseqs_cdd	nonviral_gene	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0021	persistent	direct	high	1262	0.999	GCA_003443955.1_00893
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	959645	960439	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	23988	24782	GCA_003443955_1_1_882	GCA_003443955_1_1_882	-	1839052	.	4G7X_B	Putative uncharacterized protein, TolA protein	MRLSDNHPTVNFDKSALILPILASVLLHTVIIIAVAAPLITPPTKPNTTIQTALVGQEAFNRVKTALSNHHADQNKPTATNTSSTITANDNAFIQAQNQHRYHPQVSTSATTTQAYHPPPNSAPFESNSPNIQNQPTNAHAKLAEYSNHVSDLEQSNHTESTPSRAQINAAITSVKHRIEAIWQRYPKQPNQTITFQVNMNQQGDVTSIQFGGGHPDLRESVEAAVYAAAPFYELGGMRDSIRLQFTTEQLIMDNNQTTNEPNH*	hhsuite_tools	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0022	persistent	direct	high	794	0.999	GCA_003443955.1_00894
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	960470	960904	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	24813	25247	GCA_003443955_1_1_883	GCA_003443955_1_1_883	-	1839052	.	TIGR02801	TolR protein. The model describes the inner membrane protein TolR, part of the TolR/TolQ complex that transduces energy from the proton-motive force, through TolA, to an outer membrane complex made up of TolB and Pal (peptidoglycan-associated lipoprotein). The complex is required to maintain outer membrane integrity, and defects may cause a defect in the import of some organic compounds in addition to the resulting morphologic. While several gene pairs homologous to talR and tolQ may be found in a single genome, but the scope of this model is set to favor finding only bone fide TolR, supported by operon structure as well as by score. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MVTSNRFARRQRPLNSDMNVVPYIDVMLVLLVIFIVTAPMLATGIEVSLPKEQTKPITQADKLPVIVSIQADGNLYVSHKNAIDVPITPDKLDTLLRQMHQDNTDLQVMVNADADNAYSRIMQIMALIQNVGITQVSLLSESVQ*	mmseqs_cdd	nonviral_gene	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0023	persistent	direct	high	434	0.998	GCA_003443955.1_00895
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	960930	961619	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	25273	25962	GCA_003443955_1_1_884	GCA_003443955_1_1_884	-	1839052	.	TIGR02796	TolQ protein. TolQ is one of the essential components of the Tol-Pal system. Together with TolR, it harnesses protonmotive force to energize TolA, which spans the periplasm to reach the complex of TolB and Pal at the outer member. The tol-pal system proves to be important for maintaining outer membrane integrity. Gene pairs similar to the TolQ and TolR gene pair often number several per genome, but this model describes specificially TolQ per se, as found in tol-pal operons. A close homolog, excluded from this model, is ExbB of the ExbB/ExbD/TonB protein complex, which powers transport of siderophores and vitamin B12 across the bacterial outer membrane. The Tol-Pal system is exploited by colicin and filamentous phage DNA to enter the cell. It is also implicated in pathogenesis in several bacterial species [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MNESISLISLVIEASVVVKLVMAILLLLSTISWVLIFHLGTKIGGIAKFDKRFERWFWTDDIDHQLSVVQAESERAGLELIFYTGFYDQNHQDQDSSLSDDKKVQIVERRLRMALGSEQVHLEKGLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQAESVGLATVAPSIAEALIATALGLFAAIPATMAYNHFATKSNTLYENRSLFCEGLISALVTNLAKKNTASTL*	mmseqs_cdd	nonviral_gene	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0024	persistent	direct	high	689	0.999	GCA_003443955.1_00896
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	961894	966066	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	26237	30409	GCA_003443955_1_1_885	GCA_003443955_1_1_885	+	1839052	.	PDB:5XDR_A	Replicative-polyprotein	MHSTDNLPVLAKDRHYLNKLKQKMNSTTGDLKTKCKIRYDAIYERSAEQVANRMDSIPKNLSEKLNHDLPVTAEADTLIQAIRDHQVVIIAGETGSGKTTQLPKLAMMAGRGITGQIGHTQPRRLAARSVAMRIAEELGEPLGQTVSFKIRFTEEGGKHSIVKLMTDGILLAELGSDKFLANYDTIIIDEAHERSLNIDFIMGYLKRLLPKRPDLKVIITSATLDTQRFSDYFAANGKPAPVYIVEGRSYPVEVRYRPLTDTIVSSQDDDAFDDIEDNLPRALTAAVNECFEDARTKGHPDQADILIFAATEAEIRELQEVLMLYEPAHTEILPLFARQSYGEQQKIFAPSGKGRRIIIATNVAETALTVPNIRYVIDLGFARISRYNYRSRIQRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFNSRPEFTEPEILRTNLASVILQMERLQLGDVNAFDFITPPDLRLVNDGRKLLIELGALDDKSFTKTRAKKGRTQLSSLTKIGQQMAKMPIDPRLARMLVAGDTFDCLADILIIVSALAVQDVRERPINKHAQADQKHALFRKEDSDFLFYLELFAALFDQHSTNDNQALSSNARRNFAKKHYLSYARIREWQKTHRQLSEMMAEMGFEINKQKNHQNDVKIDTKKGTRLSLKPGTSRQKSIKQALVGAKTLKHGTDDKTSIHYANIHRALLSALLSFVAHKTDTVGEYLMARSQKARIFPASTLHKKGAQWVMAFEVVETSQVYMRTLAKIEPEWIIKAAPNLLKYHYFEPHWSKKAGRVRAYAQISLFGLIVIAKELVNFEQIDLVQAREIFIRDALVANQYGMQMKFLADNANKIKDIERIEDKLRRRDLLVDEESLYQFYDAKIPNHIASRKSFEEFYHDAENKTPNFLHFSDEDVLNEAVDDSREFPESWHLGGVRLPLSYVFDPAADNDGVTVHVPIKALAQVDPVALLWGISGWRYELVLQLLKTLPKEIRRQIVPIPDTCQKIFHQLDASSKMGLLDQLVAALKTLGVQAHAQDFAPDKVEDYLRPLICVVDDKNRVIEKSRDLPKLQARHRKASVQSIAIEQGVHHHFPNHFNFVKNKHTSGIVMQEFSALKADAAQSAVFIATFTEMNAALAEHKKGVLTLIKGHLGAKQKQLTGQIDKAFKLAFAPLGDLEKLKNIVVHATLEACLYDYGPDFDHKPVSQHVDHARAAIAGLITQNNQWLISHLPLDEREFDDCQDLILKNFLLVGQEILRNLKEIYTAWQTARGKLLMLDQEIFGENIEDIEDQLDDLQLANFVYQTDYRHWRQYPRYLQALNIRLDRLQHNLEADLDAVYLLDTHMERLARCVKNPKFAEYRWLVEEYRINLFAQPMKTVQPVSAKRLETLWANLTTQ*	common_virus_hmm	common_virus	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0025	persistent	direct	high	4172	1.0	GCA_003443955.1_00897
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	966328	967824	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	30671	32167	GCA_003443955_1_1_886	GCA_003443955_1_1_886	+	1839052	.	1YC9_A	Vibrio cholerae, outer membrane protein	MSIKCQLVAIDNIIKPCYDKILNFVYFSTMKMPYFLLLGLLLAQQADADYSLLDAQKQLMSSSSAIQASHALYQADVLQAESLQKLHYPRISLNAHAFVLQQNSSIPLDHIKEQTAQHINTHFDHRFGSTPDGLLDALHDSTQTALDRLPDHQDVKLRHDGITPNITATMPIYTGGLISSSKNIANLQAQRGKFGLQERISLAKLNLIRHYFNVQLQKQLTDTQQNMLSAMQLHVDNAYKLEQQGFISRGQRMQFEVARNQVQRLYQSTQNQHQNSIYELAVLLGLPHIEPLSTPLFINTQHRPNWQALLKDSQNTPLNQKLKTDTQLADENIALRQSTKKPKIAAVARYTLDDKPDWFAGVAVSYNLFLGIDRDKQIEAAHLQKQAAQLGHEQVNEHITTTMHTAYGEMVLAQKTHALLQQNRQAAKENLRIQTLSFQEGFGTVAGVVDAQSALSQIDSETALNAYRYLLALATLLHYTGTIDDFDDYLSLDDAHKL*	hhsuite_tools	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0026	persistent	direct	high	1496	0.999	GCA_003443955.1_00898
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	967871	969034	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	32214	33377	GCA_003443955_1_1_887	GCA_003443955_1_1_887	+	1839052	.	COG1566	Multidrug resistance efflux pump [Defense mechanisms]. 	MTDKTDDVKPDTDGNHPKKQKPHTQAKSKPRPLALFLLLALIGSVLLVIIFGLIQSYGTPQNLPTANAIGSTNEPPKGVIAHLRQKITGPATFSIQGRVEGETVNISTKLPSRVAAIYVKEGQAVRAGEPLVQLISPEIDAKKQQAAAMLQSALAFQSSTDRGTRQENVDTLYANWQSAKAQATLAEESYRRGEYLYQEGVISRQRRDEMRAAKQSSAQIAQAAQQQYLKAQRGRTDELKSSADAQVQIARAAVAEADALDAETMLYAPIDGTVSKIYIQSSELVMPAVPVMSLLDNHPTITISVQENQYSHVHALPKLTGFIPALNKTADFKIVHTDDEGEFATIKNTRQTGGYDIHSFKTKLEPITPIEGLKVGMSVIFDITVLP*	mmseqs_cdd	nonviral_gene	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0027	persistent	direct	high	1163	0.999	GCA_003443955.1_00899
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	969062	970240	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	33405	34583	GCA_003443955_1_1_888	GCA_003443955_1_1_888	+	1839052	.	PF12698.7	ABC-2 family transporter protein	MIVRFIRAFCQAFLRELNRLSCNRFDLAMVMIAPLVIIVLFGAMFYHGKAHHLPVALVDEDNSELSHLIYQHIHHNETIKTVLILDNVQDAHHAINRLDVGGYIHIPKDAQNHLVRGENTGIHIAYNQSFFSIGSAISSALSKSTKGGIAKFIQTKHLTGVLPHLPGNMPHVKISVLFNPNLSYEFFLEPFLVAAVLHLLLCCLVAHAIGQEFHENSVHEWLYHSPFGALFGKISVYVLIISLWHGLWQAWLIGVRGWFVAGSLFVLIIGQLLFYLAYALFGAMVVLKTQNINKSYGILAVYGGSSMSFAGVTLPLNNAPSFTQFWSQIIPFTPFARLQVEQWVIGSPFIITLAHLNSLLIFVLIFGIGSLLLLRRINKTLIATPNSSKDDS*	hhsuite_tools	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0028	persistent	direct	high	1178	0.999	GCA_003443955.1_00900
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	970240	971340	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	34583	35683	GCA_003443955_1_1_889	GCA_003443955_1_1_889	+	1839052	.	COG0842	ABC-type multidrug transport system, permease component [Defense mechanisms]. 	MRRFIKQYLTIWLDIIKDRSIFLTMVLSVVFYGFFYPFAYQAQRPADLPIVIVDEEQSPLTQAIIHTTSHTPNIHVLAVVSDFRQAQMLVQSAKADGILLLPDNLSQSIHHGQTGGVGLYLSSAYFLRTQNIGAGLVSSLQATIIQELGQVTQTRHKPMPELIHQSALFNPLSGYGSYIFPAVAPIIVYQTIVLGLAMLVAGYRQRLWRASACDFLAIYAVALTIGCLSCFYLFGFVFWWHDYPRGGNFWGMMLGVPIFVSCAIGVALLIASWVADGAKVGVLLIFSSVPLFMLTGLAYPLMAMPKFLQPLAHALPTTQGVQMFIQLNQMGVSIQDVWQKMAYLASVAVLCLGVAFWRLRLVNKSV*	mmseqs_cdd	nonviral_gene	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0029	persistent	direct	high	1100	0.999	GCA_003443955.1_00901
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	971644	971991	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	35987	36334	GCA_003443955_1_1_890	GCA_003443955_1_1_890	+	1839052	.	PFAM:PF15919.4	toxin-antitoxin-system-HicB-like	MYPIQKASTASTICLNPFLWRACFACNDHPRTAVPMPSQAQDGEHLVSLPPSVWAKVLLLNEMLCQNVSQAELAKRMGIIPQQVTRLVDLSHATKIDTLANAFAKLGKQLQVGLT*	phrogs_hmm	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0030	shell	direct	moderate	242	0.695	GCA_003443955.1_00902
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	972123	972515	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	36466	36858	GCA_003443955_1_1_891	GCA_003443955_1_1_891	-	1839052	.	PFAM:PF03665.12	minor-tail-protein	MGIHGIDWVICAFGYHAGGKEYFDVKCHKPKAYQAPLLGREYHHGVQDCYSLVRDYYSRELDIHLPDFHRRDGWWENENHEPLYENNFTKAGFIKVQDKNDLQKHDVILCRVGRTHHVNHALIWLGDDGS*	phrogs_hmm	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0031	cloud	direct	high	392	0.997	GCA_003443955.1_00903
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	972497	972790	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	36840	37133	GCA_003443955_1_1_892	GCA_003443955_1_1_892	-	1839052	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MGGFLLEKFMRLTKTIKEAIHAHAKSAYPNECCGLIIDGQFYPCNNIAPNPTEHFEIDPIDMFEMGEKGKYKRLSIATQTAMLSRPKWIGCRWAYMG*	mmseqs_cdd	common_virus	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0032	cloud	direct	high	293	0.997	GCA_003443955.1_00904
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	972821	973231	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	37164	37574	GCA_003443955_1_1_893	GCA_003443955_1_1_893	-	1839052	.	PFAM:PF11008.7	lipoprotein	MKSIIALTLLFVLTACSTKPIVNYTETVSLVDNNVTSDRSTIVVRRDMGFMGSGCPVEIYLNGVKYARLQSSQSINIHTTAGTHILSAKFTGRGFCQDRLNETEVTIQKNESKYYRLAMNANGDFHIFPTLSTPIQ*	phrogs_hmm	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0033	shell	direct	high	410	0.998	GCA_003443955.1_00905
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	973292	973960	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	37635	38303	GCA_003443955_1_1_894	GCA_003443955_1_1_894	-	1839052	.	PFAM:PF05100.11	minor-tail-protein-	MSFNTDIQQTTVQGFITLYELDARKLGGEIYRFHGHNDGVIRWQGQDFHPIAIKADGLEMRSDGRASTPKLSIGDKINGIQGAVSALCRLYDDFARAKLTVTHTLQAYLDSHDAQNYRQQEWYIEQKVSENPSLGIVEFELSNPVDFEGQKIPVRQITTYCNEAVCGRYRGEVCGYTGTARFTHDGKPTDDPTLDRCSGLLAHCKLRDNEGSFCGFPAAGLV*	hallmark_hmm	common_virus	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0034	shell	direct	high	668	0.999	GCA_003443955.1_00906
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	974059	974451	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	38402	38794	GCA_003443955_1_1_895	GCA_003443955_1_1_895	-	1839052	.	.	hypothetical protein	MSETTLTEVSRTEAQVLQSFIAQVDYWKNQHGDKAATIEVIYYPEDDGFEVANGEPNNGVLKRNRTTAFRADLLAWASNQLRQLQGWDNSQTVTEFSLSYKNDRYGVRAALASEATDKADDGAEQAEQDK*	.	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0035	persistent	direct	high	392	0.997	GCA_003443955.1_00907
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	974556	974954	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	38899	39297	GCA_003443955_1_1_896	GCA_003443955_1_1_896	-	1839052	.	PFAM:PF05939.12	minor-tail-protein	MGDFITFLTYIESEKLNLREKTMKTFNWDISADSSETTALNTTITAFGDDYEQAVSFGINNSRKSWQCSKTDTKAVIDEILSFLLNTKGVEPFTFAPIKGEPAIKVRLDGEISRQKTGGDVWQIGFTLKQVF*	hallmark_hmm	common_virus	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0036	shell	direct	high	398	0.997	GCA_003443955.1_00908
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	975026	979012	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	39369	43355	GCA_003443955_1_1_897	GCA_003443955_1_1_897	-	1839052	.	PFAM:PF10145.8	minor-tail-protein	MGGFLLGEFMLNTYRLDIQVNADSANTALGNLKEHFDKIEQSSGKASVGIDGFSDKADKASKSSKKAGDEAKKASNAQKGLAASFKEATAVAAVGFAAISGTVALSIGKANEFESALAGISKVVDFKSPDGLKDMRAELEALSTQIPLTFTELAQITAAGGQLGVAEENLIAFTRLTADMATAFDISAESAGDSMAKLANIFSKPIEEMGEFGDMINTISNNMPAKASEIVESLTRIGGTAKAFGLAEKEAVALTSAMISLGKAPEVASTAINSMLTTLSTLDVADKDVAASLKAMGLNAQEFGKTIREDGYKAIMQLLEGIEQLPKDQKIGIVTDLFGKNFGDDIVQLAGAPDVLEKINELLAEQQGYIGSMAQEAKNVSSTSEARNQMFLNSLENASAALGEVFKPALDSVRDAVIPVLNAFADFTKENPTFVAAIVGIAGAFTGVLTILGGVLAVLPILASGWAILTAGATVAVAPILGVVAAIAAVVAVGALLYDNWDLIKAKGQEIWAAVSDYASQAWESIQQAWQGVGEWFGELWDKVKQTFFNWLSQMPKPVQDMVANIGEIFSTIVDVAGAVWDGIANIAKSVWHAITKFVSYAIDKIKPIIKSVLEFFKNAWDGLVGIAKTVWQAVVSVVSHVFDKISGIISTQFEAMKAIFMAGVTIFASIFNAGFEMVKNIFSTAFKVIKAVLTGDMQGVKDAIKDGFQKAVDILKKLVGNIVDALKKLGKDLLQVGRDAMQGFINGISEKIDAAVSKAKQMASSVKNAVTGFFDIHSPSRVMKQVGGWISEGLAIGIAYKAPIAAKEAKNLAKSVKNALESDLQKTAEEIFLTKQHIKGNPYAQLTKDIAFGKYGKQDTSRLQKLAQEQILQSNILTLTQQLHEAQQNLANVGLTSIEIMQRQYDETDKSVRASLDLFEQVKKTSQELIDATNRHEATQAFESTLKDIKKQMAIMGSQDPLAEFLYDLQNADKYAYYTTEQLATLKDEMIKLQNAKDAKQASDGIKESLKDINKQLALLGSNHPLDDFFYELEQTDKYAHATTDEINELTDAIFKLQDAKDKLNAKQAFDKLMKDTALANETPAQRLQREYDEKMAVIDRYEQMHSDKLGDATSLRQQITERYEQAEKDAKVKNYQEHLTAFAGFLKNTAGEQSKAYRVMFAASKAYALADVGVKMGKAVADAWADPSAVTIWQKLANVAKVSLEQGHVLSMINAISPKGFATGGYTGNMGINQVAGVVHGQEYVLNAKATKRIGVGNLERLNRGDGIGGHVNHINVHVTVNSDGSNVQADTQMGKTMGEAMAKIARQVVIQESKQNGHLDRLYRR*	hallmark_hmm	common_virus	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0037	shell	direct	high	3986	1.0	GCA_003443955.1_00909
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	979045	979881	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	43388	44224	GCA_003443955_1_1_898	GCA_003443955_1_1_898	-	1839052	.	.	hypothetical protein	MAQELPTTESLFDFLYLDSIKIRSFYAQLTGFGSLASIKANNALNSSLASEGAFGVNAMAKIDAKVNYATGENQSSEKTYDATPTLPREMIDKLDELGFISRELGENSAGNLVLLNGVLSITDIETLQNLLEPTMYFATEEEYKQLYGDRKRQAVKKKLEENKPVVQLIKAIPYALEARLKVGEDMVWMTLNRGEMVGNPHDINLKHGKVLFGEYYVLGVLDAIPNDDMNIDMTTGSFGDVILELSQSLKETMGRNTSSYGITPIAIFRVIRTNQQVK*	.	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0038	shell	direct	high	836	0.999	GCA_003443955.1_00910
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	979844	980026	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	44187	44369	GCA_003443955_1_1_899	GCA_003443955_1_1_899	-	1839052	.	.	hypothetical protein	MQDNAKKSDATHHSAQLLRDMFSCLNQAMSRETEKFHQEQKKVKEEINRGARITNHRISL*	.	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0039	shell	direct	high	182	0.995	GCA_003443955.1_00911
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	980184	980978	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	44527	45321	GCA_003443955_1_1_900	GCA_003443955_1_1_900	-	1839052	.	PFAM:PF10547.8	P22_AR-protein	MSNISIFNFESTKQVRTAIRNGGDIWFCLPDVANILAISNANPSRFNLSEAGVHKMYISYESGKKQVTFINEPNLYRVIFRSNKAEAVKFQNWVFDEVLPTIRKTGQYTIAFATKDERKPLVQAVNMLVGETGAIYSNVWKMVHQRFGVDCVDELTGEQVYQAVEYVHGLILQHGKKPVDDVLLYKVLVDSAVYLRDYAQLIKQMRDIRFFDENMGKNMYNFVADNINDIVKLTHDMKLTNKNGRPMFEKNRINYYGGATLIYR*	common_virus_hmm	common_virus	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0040	shell	direct	high	794	0.999	GCA_003443955.1_00912
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	981270	981722	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	45613	46065	GCA_003443955_1_1_901	GCA_003443955_1_1_901	-	1839052	.	pfam12869	tRNA_anti-like. This is a family of bacterial, archeael and viral proteins that is related to the tRNA_anti family pfam01336. The major characteristic of families like tRNA_anti is their OB-fold, and many of them bind DNA.	MKKLFKFILIAVIALIGLGIIIGMLSGGDNNNQSASNNTAEPAAPAEPPMMVSATEIASDYDDNEVAADQKYKGKMLEVSGNVARIDSGVGDKAIVQLVGKNEFQTVSAQGNNDFTQYATTLKKGQDIVLVCKGDGEVIGSPQLKNCQPK*	mmseqs_cdd	nonviral_gene	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0041	shell	direct	high	452	0.998	GCA_003443955.1_00914
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	982088	982549	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	46431	46892	GCA_003443955_1_1_902	GCA_003443955_1_1_902	-	1839052	.	.	hypothetical protein	MAFDLTLLKKDAKMSAKREIEFDGLELTLEIQASEAFKRAAAEVQKIANTPKKVTKDSLKRGNQDEIGEYEAMLFILGEYCISQWNVTADGEPLAINGDNFLILLDQGFEKDKLTQFITLLFETYASLSQEFEDNKAKLVKKSTTATNGKKSG*	.	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0042	shell	direct	high	461	0.998	GCA_003443955.1_00915
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	982600	982746	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	46943	47089	GCA_003443955_1_1_903	GCA_003443955_1_1_903	-	1839052	.	.	hypothetical protein	MEYITIIVDFMKYLIEKHGLFVIWLMVASLITLYKLDMILTAVHLFFN*	.	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0043	shell	direct	high	146	0.993	GCA_003443955.1_00916
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	982830	983738	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	47173	48081	GCA_003443955_1_1_904	GCA_003443955_1_1_904	-	1839052	.	PDB:5NGJ_B	Tail-tube-protein	MSSGAFVKTAYAKQTGETLPKTGWKTLPNISNGLTVATELTNSEMLSGSRMAKAGMVTSASVQGDIETELMFGAYDELIAAAFWSEWSAGASPNTLSVGATKHQFAIAKDFSDINVNHVFTGCVVSSFGLTIDTSSLIKLKFGMTGLGYQESKTESFAKTPTAQADTAKASGLSIGEIKVNGTKLDVCVESFSFELDNQTEVQKCLGDNIYGGNILAMLTNITGSMTIAYSQKAHEMISNQMTGTTLSLELPIKFGNSKYVIKIPKFQVSGEIPSPSGTDLVTVDLSYTVVDESPVIEKHTA*	hallmark_hmm	common_virus	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0044	shell	direct	high	908	0.999	GCA_003443955.1_00917
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	983773	984291	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	48116	48634	GCA_003443955_1_1_905	GCA_003443955_1_1_905	-	1839052	.	pfam11195	Protein of unknown function (DUF2829). This is a uncharacterized family of proteins found in bacteria and bacteriphages.	MKLITASVLTALLTSFVATRTVQATPLNRQEYNDLRGWQVPDNENPNDDGYLVVNAGVSERNVDGFDGYVSWLPKLAFEEQYKNDNLTFGQAVELLKGGKKVARKGWNGKGMYLLLATDIDFKTKANLSDMQNENGELTVPSITMKTADNKFAVGWLASQTDMLAEDWVVVQ*	mmseqs_cdd	common_virus	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0045	shell	direct	high	518	0.998	GCA_003443955.1_00918
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	984300	984686	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	48643	49029	GCA_003443955_1_1_906	GCA_003443955_1_1_906	-	1839052	.	PDB:2L25_A	tail-completion-protein	MNSFHIEQTLLTHIKAWEHFDDVPLAKENRNFKPPDGIWGRVTILGGVNQVRSISNTPNILQQGTLVIQLFCPQDLGTVKIKIWSDSLAQYLKAKQLGRLELLAPSIINVPSNDGIYQINVSVPYRYY*	hallmark_hmm	common_virus	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0046	shell	direct	high	386	0.997	GCA_003443955.1_00919
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	985057	985257	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	49400	49600	GCA_003443955_1_1_907	GCA_003443955_1_1_907	+	1839052	.	PFAM:PF16777.4	transcriptional-regulator	MPKITSTPKSQTQRTADSDAKRGFKTKGLKLHIDDISLIENLSKRLNIPQNQLIMDAVRAYQRQLD*	phrogs_hmm	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0047	shell	direct	high	200	0.995	GCA_003443955.1_00920
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	985254	985601	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	49597	49944	GCA_003443955_1_1_908	GCA_003443955_1_1_908	-	1839052	.	PFAM:PF04883.11	tail-component	MGIKWHKKITVEPIADKIDATYRKFAIDCYNNVIALSPVRKGRYKNAHHISIGSPSYAETGGGIELVLGLPKHTYPLIYIQNNLPYALRLEHGWSQQAPTGVYGNAFNSAIANLG*	hallmark_hmm	common_virus	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0048	persistent	direct	high	347	0.997	GCA_003443955.1_00921
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	985591	985956	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	49934	50299	GCA_003443955_1_1_909	GCA_003443955_1_1_909	-	1839052	.	PFAM:PF12206.7	head-closure-Hc1	MGLNAEISTEITQAFDTDLKDAVKDFTGRRVILSDDDWAVNDTQVLSTINYSGRGVFTGFYAHEIDNKTIMQQDTKLICLQSELTDRPQMNDSINQMKVMNISQDPAGICYFIQLRGTNGD*	phrogs_hmm	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0049	persistent	direct	high	365	0.997	GCA_003443955.1_00922
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	985958	986317	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	50301	50660	GCA_003443955_1_1_910	GCA_003443955_1_1_910	-	1839052	.	CDD:cd08053	Head-Tail-Connector-Protein	MITLDDLTDIDKADEQTVVIVNAWLNKHKIRAFDKTPDPIRQAGRYIAKAWLGGDLFATRTEGQVISKSSKAGDVSVSKTYADGQMGQAMSQNEQIALALIEPYLQQPLGMFGLPLVRV*	hallmark_hmm	common_virus	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0050	shell	direct	high	359	0.997	GCA_003443955.1_00923
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	986378	986581	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	50721	50924	GCA_003443955_1_1_911	GCA_003443955_1_1_911	-	1839052	.	.	hypothetical protein	MSLPKDKVKPAFNFTYPSERAYFDESKSTLTNAQVTDPAKSGADYGIKDPQATEALTGTKSETAKVE*	.	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0051	shell	direct	high	203	0.995	GCA_003443955.1_00924
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	986592	987608	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	50935	51951	GCA_003443955_1_1_912	GCA_003443955_1_1_912	-	1839052	.	PDB:6R3A_A	Major-Capsid-Protein	MAKLREIFNKNVTLSYQVKDNLQRSKFWQSGAFVSDARLRPLLNSGSLTFDVPFIHPIDGNLEANYSNTIMTDIAMPRSIEGSKSKGRLALLNEGFIESRLESYLMGQSPLKLMAQMIDDYWLTQAENRAIATLFGLLNYDQSNGKKLSTDISKATADDSSGFDVHAFIDAEGSLDEMHQGSGLMIVHPLIATKMRKQRLLERVTTADDLKPIDMYNGRRLIQSKRATVIGTGKNAKYVSYLLGAGAFAADMVAGHDDLELERTANTGNGSGHTTLWTRRNMLIHPQGFSFIAEPSTLTGGTKNEALSPSWTDLTTAANWRLDADADATPIRFLITNL*	hallmark_hmm	common_virus	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0052	shell	direct	high	1016	0.999	GCA_003443955.1_00925
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	987612	988262	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	51955	52605	GCA_003443955_1_1_913	GCA_003443955_1_1_913	-	1839052	.	PFAM:PF06810.10	minor-structural-protein-	MNLEELLKSLGLDDEAIGKVVEATKPDQAQAEEIERLRKHNETLLGEKKAESEKRRAEQTEKERLAEETARKKGDFEALEKQYQAKIQELNEQIAKRDKERDENLVKSHAQKLSSQLSDNPANQEILQILIEKRLSAKDGQLSVLDDSGAVSIMTLDDLAKQMQNCGKYDSLIIGTKSCGTGSNGQSAKRAGDYSEQERLALAHSNPALFNQLFLE*	hallmark_hmm	common_virus	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0053	shell	direct	high	650	0.998	GCA_003443955.1_00926
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	988315	989319	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	52658	53662	GCA_003443955_1_1_914	GCA_003443955_1_1_914	-	1839052	.	PFAM:PF06152.10	minor-capsid-protein	MKHLINLERFKVHLANKFKTTLNEIDEFLQLVVFRHEISELNYKEFELLIGESKQKLLGFLAGYALELTQDWQELYDYSYTLETKMIDDDKPDTLNMNEPQFDADSPIKLSAQVGVMLNQILAKFGDEQSTKISNAISYAYTNGLTNQELIQIIRGTRKNRYQDGILAITTRHAKTIAHTGTAIVANQAKQQFIHDNKDIIKGIKVIATLDLRTSSICRGLDGVFMPLDKARYPPYHFNCRSSFEIVYDGYQTPKQRASMDGVVKNQSYYEWLKNQPAQYQDEVLGKTRAKLFRDGGMTVERFRALQLDKHFTPLTLEQMRALEPKAFKKASIH*	hallmark_hmm	common_virus	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0054	shell	direct	high	1004	0.999	GCA_003443955.1_00927
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	990192	990842	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	54535	55185	GCA_003443955_1_1_915	GCA_003443955_1_1_915	+	1839052	.	PDB:2FJR_A	Repressor-protein-CI	MPSERAKADQFPKMIRRYSKGQAKPRNDKMKLLTQCLGVPITWLDYGEGEMTKNNDKLTPITEWDDSTPLDDDEAEIPFYKDIAFACGHGAVNGDAPLEGRKLRMGRRTLSNLGVMPINAYAVTACDDSMTPYVQDGDTIYIDKGRKEVKDGRIFAIRFGELCLCKRLYRLPDGGVRIVSDNAAEFPEQVATKQQISDGEFEVIGWVWSVSRLERW*	common_virus_hmm	common_virus	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0055	shell	direct	high	650	0.998	GCA_003443955.1_00928
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	990894	991799	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	55237	56142	GCA_003443955_1_1_916	GCA_003443955_1_1_916	+	1839052	.	PF14337.6	Domain of unknown function (DUF4393)	MTAETFHLIPAITGAVSGAASVGLLNGPLQTLQDIWFVVYGHKWHYKVESIKAQQAMNIQAMQNNIQTGIEKIPANALKDPNVAIIGPALEASRFHMNEENIREMFANLIVSAMDERKDGQMHHAFVEIIKSLSPLDAKNLKYLNQDSAKNISPIANIIRQESNSYHMLYQHVFLGNPEVSDQDLIAPSIDNLSRLKLIDITYNDYLTDDSEYESFYHSAPYQEMTSALNKEHEALNLDISILQNPDLKIEFEGKILNKDERSEKLDQVMKGLESKIEIQKGIIKLTAFGKNFLSVCSPTT*	hhsuite_tools	nonviral_gene	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0056	shell	direct	high	905	0.999	GCA_003443955.1_00929
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	991817	992035	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	56160	56378	GCA_003443955_1_1_917	GCA_003443955_1_1_917	-	1839052	.	.	hypothetical protein	MALAINIVLGANTVHFSRNIQKATQNAKKYLQGFALLAYMQAADKDKLVQDFLIIDPNPMTDEQKKPLLSAL*	.	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0057	shell	direct	high	218	0.995	GCA_003443955.1_00930
GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote	cenote	CDS	992098	992484	GCA_003443955.1	CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955.1_CP010901.1	GCA_003443955.1|CP010901.1	GCA_003443955_1_1	GCA_003443955_1_1@C59	56441	56827	GCA_003443955_1_1_918	GCA_003443955_1_1_918	-	1839052	.	.	hypothetical protein	MFGIKLLHSDDFIKSASSFGCFLAIMDKQTNKNHVYNLSTQVQRFELIDIDQVANLANSVQNGAISATVGTLLVGAGVLPALVALSIGAGLPNRTKDAYVCHIEFDDSKSAILQLSKHKYQQFLKHIA*	.	hypothetical_protein	C59	56827	935658	992485	GCA_003443955.1|CP010901.1@region_935659_992485@tool_cenote_CDS_0058	shell	direct	high	386	0.997	GCA_003443955.1_00931