core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	261051	262457	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	1	1407	GCA_003490935_1_3_222	GCA_003490935_1_3_222	-	365085	.	PDB:3BGW_F	DNAB-Like-Replicative-Helicase	MASQPQIKSSDKKTAQISIPPHSLEAEQAVLGGIMLSNQHWDGIAERVIADDFYTFQHRLIFTEMEHLMRNQSPIDLITLDQALRSRGVSDEVGGFAYLAELSNNTPNAINILAYADIVREKAILRELISVGNHIAENSYSPKGQDIKLILDEAEREVFAIAEKRTTSSEGPQNVINVLESTIEKIDILSKLENHSGVTGITTGFTDLDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCENAAMASEKPVLVFSLEMPAEQIMMRMIASLARVDQTKIRTGQNLDEIEWNKIASVVGMFKQKNNLYIDDSSGLTPTDVRSRARRVYRENGGLSMIMVDYLQLMRAPAFSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRTLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSEDKGVAEIIIGKQRNGPIGRVRLKFNGQFSRFDNLAEQREYHDDY*	rep_hall_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0001	persistent	direct	high	1406	0.999	GCA_003490935.1_01078
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	262599	264035	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	1549	2985	GCA_003490935_1_3_223	GCA_003490935_1_3_223	-	365085	.	PRK05826	pyruvate kinase; Provisional	MSRRLRRTKIVCTMGPSTDRDNNLEKIIAAGANVVRMNFSHGTPDDHIERAERVRSIAKKLGKTVAILGDLQGPKIRVSTFKDGKIFLDIGDKFILDAELPKGEGTQESVGLDYKTLPQDVVPGDILLLDDGRVQLKVLSTDGAKVFTEVTVGGPLSNNKGINKLGGGLSADALTEKDKADIITAARIGVDFLAVSFPRSSADLNYARELAQQAGLNAKIVAKVERAETVATDEAMDDIILASDVIMVARGDLGVEIGDPELVGVQKKLIRRSRQLNRAVITATQMMESMISNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMASVCLGAEKMPSINVSRHRMDKEFETIEESVAMSAMYAANHMKGVAAIVTLTSTGRTPLLMSRISSGLPIFALSRNQETLNLCALYRGVTPVYHGEDSRSETSAKAALQSLKEKGYLSTGDLVLVTHGGQGATQTNVCRTLIIE*	mmseqs_cdd	nonviral_gene	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0002	persistent	direct	high	1436	0.999	GCA_003490935.1_01079
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	264567	265568	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	3517	4518	GCA_003490935_1_3_224	GCA_003490935_1_3_224	+	365085	.	PDB:1Z19_B	Integrase	MATIIKNGKRWRAQVRKFGVSKSATFLTQTDAKKWAEMLEKQLESGKYNEIPDITLDELIDKYLKEVTVTKRGKREERIRLLRLSRTPLAAISLQEIGKAHFREWQNQRLKEVSPATVLRERSSLSALMAKAIEWDFITENPLKYLEKPKAPAPRTRRYDEHEIERLIFVSGYDVEHIEPPKTLQNRTGAAFLFAIETAMRAGEIASLTWNNINFEKRTAFLPITKNGYSRTVPFSVKAIEILQHLTSVKTESDPRVFQMEARQLDHNFRKLKKMAGLENANLHFHDTRREALTRLAEKVDVMVLAKISGHRDLSILQNTYYAPDMAEIAQRL*	common_virus_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0003	cloud	direct	high	1001	0.999	GCA_003490935.1_01082
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	265599	265883	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	4549	4833	GCA_003490935_1_3_225	GCA_003490935_1_3_225	-	365085	.	.	hypothetical protein	MITNEQVMEKLASIEALLQKPVINEHSRELWTIDDVAKYFGFSMDHTRRNVIASPFFPAAVAISGRTGGKSKDLYVSGEVVSFCLKHKKRKARI*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0004	cloud	direct	high	284	0.996	GCA_003490935.1_01083
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	265883	266386	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	4833	5336	GCA_003490935_1_3_226	GCA_003490935_1_3_226	-	365085	.	PFAM:PF03819.16	MazG-like-pyrophosphatase	MENLQQLIKNIEQWAEDRNLIKGSTPKRQFIKLLEEFGELCNGISKAKLDLIKDSIGDCVVVLTIISAQRNRNEINIGSMAVEHHPKTELTADDCVIELLHDLTRISCELDRNTSLEMLFGNIVLDLVEVCNCFDLDLTDCVQAAWDEIKDRKGRMIDGVFVKEGDL*	phrogs_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0005	cloud	direct	high	503	0.998	GCA_003490935.1_01084
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	266396	267004	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	5346	5954	GCA_003490935_1_3_227	GCA_003490935_1_3_227	-	365085	.	PFAM:PF05037.12	single-strand-DNA-binding-protein	MDFTYDEKQALQGGMGAFVENTGAYKGKIIFAEWISTSAGAEALKLTFETDQGERADYLNIYYQGKDGLPIDFGVKMIQAVMGVTGVRKLSRLASDSALICPELNSKPIGLFLQKVLYTKQDGSDGYRFQIIVPFSPKSEKTLAEFKNGEDAKRIVHLSQTMRDKDEREKPKRGRPPKKENVATTVQQDDPLSAFHDDEIPF*	phrogs_hmm	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0006	cloud	direct	high	608	0.998	GCA_003490935.1_01085
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	267019	269205	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	5969	8155	GCA_003490935_1_3_228	GCA_003490935_1_3_228	-	365085	.	PFAM:PF05840.12	Rep-protein	MMNWELECNANLAKREQAMADARAVMMQSAVNFDRTFDTAQATSAQMELFSVAPHQFDYVEKLLSALPRKRQREHFRHVWLRAFESVKDDGSIGFKFGNKQAAYANTYLREILTNRLKAVFQHYHVSLDWLIDRDTHSQVVALSKGKKAANFPFYLLGEHQLKEMADKLAMLFMKLQSDFVTEQAERKERGEISLDDFTALSRDLYRLVGEVCADIGFPLKHWFAYQDNRFLDVNDIEVDLNKSVCPTHWKRQLTTAQKRLKEHVEIGCGAVSAKVSPYVSQTAFNDYRAQRADNLEYLQQMVLENLDDSTEQMPLIEMWKKSVANPAIRFQETMNRLRGIDEWAIENSFVSLFLTLTAPSSFHATHETGKNNKKWQGASPRDTQRYLNKVWAQLRAQFAKRGIGFFGFRGVEPHHDGTPHWHLLMYVKPEHKDDVIHLFRKKALELDGDEFGAKKYRFNVDEIDPNKGSAIGYVAKYIAKNIYAGKQGKEMSDEVENLTLLENVQRVSAWANLWGIRQFQFYGTPSISTWRELRKIDDAMAAIADDEVLDIGRTVADVSCFGSYLKVQGGAMTKRCDQPICIEYEECEPNKYGEIRKKIMGVKNRFTEKKIITKLKNWVIKSAKSALGSTALNSESTETNKAHRAAWTCVNNCNRSKFEQQVNLLMLPIGSPLKPSQIDLLMRHGRLRLNDYRWICCENDEVFIKEEKIPLAQTFGWGESLGDFKLM*	rep_hall_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0007	shell	direct	high	2186	1.0	GCA_003490935.1_01086
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	269215	269523	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	8165	8473	GCA_003490935_1_3_229	GCA_003490935_1_3_229	-	365085	.	.	hypothetical protein	MENNICIALDCGATLEILPIGTRFQVVEVMGDQDSWYGKQKTRTVGNLHNTIWGAIEEVRRYDLAQYEMLSLEELLSAVSSTNNKIKEYFEYHSEYLANTAM*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0008	cloud	direct	high	308	0.997	GCA_003490935.1_01087
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	269539	269682	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	8489	8632	GCA_003490935_1_3_230	GCA_003490935_1_3_230	-	365085	.	.	hypothetical protein	MILSNLWGNVMSELFMMFLVAVFAVLGATITVMGLIEFITDVLDSRW*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0009	cloud	direct	moderate	114	0.792	GCA_003490935.1_01088
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	269645	269899	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	8595	8849	GCA_003490935_1_3_231	GCA_003490935_1_3_231	-	365085	.	NF033650	ANR family transcriptional regulator. ANR family transcriptional regulators include the AggR-activated regulator Aar. The name ANR (AraC Negative Regulators) refers to an effect on, rather than homology to, certain AraC family transcriptional regulators.	MKKLAIKTYLDHAQHAKESEQQGNYGLAAKQWRSAWIAAPTATQTNWSFARAEYCFKKAIEEGQIKLEKTRQYDFKQFMGKRDE*	mmseqs_cdd	nonviral_gene	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0010	cloud	direct	high	254	0.996	GCA_003490935.1_01089
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	269896	270069	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	8846	9019	GCA_003490935_1_3_232	GCA_003490935_1_3_232	-	365085	.	.	hypothetical protein	METQMNKSAQKWYRKYRRFLALWGHLKQQGKDDIAALVYSKIIESANMTVYLARNAK*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0011	cloud	direct	high	173	0.994	GCA_003490935.1_01090
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	270050	270448	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	9000	9398	GCA_003490935_1_3_233	GCA_003490935_1_3_233	-	365085	.	.	hypothetical protein	MALMPYCFDDETESAAEKWCRVNQVKVPEIRSFDDALHSLSKSQFRVEREFDGLQQGFREMLLELADLDFSDLRAGHLTGTKLHHYTEQGQRKIARALRKVRLLSGMFSQGVTEREFTQIDTQEDKNGNTNE*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0012	cloud	direct	high	398	0.997	GCA_003490935.1_01091
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	270466	270726	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	9416	9676	GCA_003490935_1_3_234	GCA_003490935_1_3_234	-	365085	.	.	hypothetical protein	MASSNYVYDNGKKRHNRVNVWQLNKTVQEQARNIQLLQRAISHQANVNAQQVLLNESLSDRIALLEEEQWAREQSIFQRFARWFRK*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0013	shell	direct	high	260	0.996	GCA_003490935.1_01092
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	270818	271066	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	9768	10016	GCA_003490935_1_3_235	GCA_003490935_1_3_235	-	365085	.	PFAM:PF04216.11	transcriptional-regulator	MKVNVKCPKCGSENIYVRTSERLSKLTTQTFGYCSGCRECRFKVISEIVEVETASFETNQQAMLGSKPLDETDTRQVEIPTD*	phrogs_hmm	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0014	cloud	direct	high	248	0.996	GCA_003490935.1_01093
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	271120	271398	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	10070	10348	GCA_003490935_1_3_236	GCA_003490935_1_3_236	+	365085	.	.	hypothetical protein	MYSTYPEFSLPKFDRHISAFIDTFEIDTDACPLFDKEFVVGIQCRGFIYRHIHCQNIAELDALANYLDYCGDFRQELPPKGVDRLWVLLDER*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0015	cloud	direct	high	278	0.996	GCA_003490935.1_01094
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	271259	271615	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	10209	10565	GCA_003490935_1_3_237	GCA_003490935_1_3_237	-	365085	.	.	hypothetical protein	MSEKNNTGGTEWETLGKGRFLLLQNQYGEYSLWLESQDGFRERYSMEKLEEWMNLALEQGVVNDGNIKLSRSFTFRPKEPRVDLRLSAEAPDENRHSSQDNLPTRQAQQYFDNEYVGK*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0016	cloud	direct	high	356	0.997	GCA_003490935.1_01095
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	271831	271986	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	10781	10936	GCA_003490935_1_3_238	GCA_003490935_1_3_238	-	365085	.	.	hypothetical protein	MAKTEKKRELKSEIIAFRVTASFKEKLQEMAQADKRELNDFIRLKLEECIN*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0017	cloud	direct	high	155	0.994	GCA_003490935.1_01096
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	272029	272226	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	10979	11176	GCA_003490935_1_3_239	GCA_003490935_1_3_239	-	365085	.	.	hypothetical protein	MAKKVDEQLWVRVLELEQALKEQEKQTKQRIDELGQQYHDHHNHLPVLCFICAVIGTFCAFQFFR*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0018	cloud	direct	high	197	0.995	GCA_003490935.1_01097
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	272261	272503	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	11211	11453	GCA_003490935_1_3_240	GCA_003490935_1_3_240	+	365085	.	.	hypothetical protein	MTDETLVIPIEVDSPLNITFHAETGEMTVECFQFVSGAPQAKMAFRYTPQATQEMLRALAIFQEKLGTTFLTQATPHNVQ*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0019	cloud	direct	high	242	0.996	GCA_003490935.1_01098
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	272633	273295	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	11583	12245	GCA_003490935_1_3_241	GCA_003490935_1_3_241	+	365085	.	PDB:2FJR_A	Repressor-protein-CI	MKEWYSAKELEGLDGLPSQATNITRKAKNENWKMREAKGIKGGAFEYHISSFPDVTKNALGFTDDTVRVVNLHEPLAKNTIRVEILDIEASAGNGTFLTRTEQGLLAQEFDLDFFRRQFGRTDAKNLKIIAVKGDSMVPTLESGDLLYVDVSENYFSADGLYVFTFDDHTFIKRLQKRGREMWAISDNKEEYKEWEIKQDDPVYIHGRVVFSLPMKMKKW*	common_virus_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0020	cloud	direct	high	662	0.998	GCA_003490935.1_01099
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	273332	273571	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	12282	12521	GCA_003490935_1_3_242	GCA_003490935_1_3_242	+	365085	.	PF13783.6	Domain of unknown function (DUF4177)	MLYEYKMIQAAPHIIAQRKNIQTAAADYLQELVNEQARLGWEFFRIDDFSTEEAAGCFSGGKTTTKIHKVITFRREKND*	hhsuite_tools	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0021	cloud	direct	high	239	0.996	GCA_003490935.1_01100
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	273571	273774	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	12521	12724	GCA_003490935_1_3_243	GCA_003490935_1_3_243	+	365085	.	COG0759	Membrane-anchored protein YidD, putatitve component of membrane protein insertase Oxa1/YidC/SpoIIIJ [Cell wall/membrane/envelope biogenesis]. 	MVWLSIQLILLYQYLAPVKIRNGCRFEPSCSNYAILALRKYGFLRGWKMAFNRLKRCKYPNGGDDYP*	mmseqs_cdd	nonviral_gene	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0022	cloud	ambiguous	low	2	0.01	GCA_003490935.1_01100
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	273831	274055	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	12781	13005	GCA_003490935_1_3_244	GCA_003490935_1_3_244	+	365085	.	pfam05901	Excalibur calcium-binding domain. Extracellular Ca2+-dependent nuclease YokF from Bacillus subtilis and several other surface-exposed proteins from diverse bacteria are encoded in the genomes in two paralogous forms that differ by a ~45 amino acid fragment, which comprises a novel conserved domain. Sequence analysis of this domain revealed a conserved DxDxDGxxCE motif, which is strikingly similar to the Ca2+-binding loop of the calmodulin-like EF-hand domains, suggesting an evolutionary relationship between them. Functions of many of the other proteins in which the novel domain, named Excalibur (extracellular calcium-binding region), is found, as well as a structural model of its conserved motif are consistent with the notion that the Excalibur domain binds calcium. This domain is but one more example of the diversity of structural contexts surrounding the EF-hand-like calcium-binding loop in bacteria. This loop is thus more widespread than hitherto recognized and the evolution of EF-hand-like domains is probably more complex than previously appreciated.	MKKIILILTALSFVFPTATFAKSKKADAEQFNCEDTKYCKEMRSCAEAKYHLNECGESRLDRDGDGVPCENVCR*	mmseqs_cdd	nonviral_gene	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0023	cloud	direct	high	224	0.996	GCA_003490935.1_01101
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	274114	274608	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	13064	13558	GCA_003490935_1_3_245	GCA_003490935_1_3_245	+	365085	.	.	hypothetical protein	MKNMISSNYKQSIFNRFKGYLRFLNEHPEFYLVSIIYSFLPDFLKGKTFCEAFSALIPLIPLLIAYVLAKCIFILKGGKVLTCILCFSACFYIFSYTHMIAIKTVNEIQNDYMSSYILNFFVDKTPEYISYLILFGYTILPSLPVLGLFWNMYKKAQVAHKEKK*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0024	cloud	direct	high	494	0.998	GCA_003490935.1_01102
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	274605	274970	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	13555	13920	GCA_003490935_1_3_246	GCA_003490935_1_3_246	+	365085	.	.	hypothetical protein	MTDNLFTTEMFSDYLNIKKISNICPCCNQNLENYVARGMEFRANVIENGKIVPSSDENDNVGLGLPYTVIDANGLLTGIRDGAYGVFLFRCENCGFVRAFDAAFVKMEYSLLKREEASQKE*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0025	cloud	direct	high	365	0.997	GCA_003490935.1_01103
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	274974	275270	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	13924	14220	GCA_003490935_1_3_247	GCA_003490935_1_3_247	+	365085	.	PFAM:PF10779.8	hemolysin	MANKSHLYIVDDDTAQVTPTGFNGGEPPMSHLEKRVEKLEEQYLKIYTDLEIIKSNYATKSDVSDAISLQTKWIAGTIIGALVLGIGAMSAILKWLIV*	phrogs_hmm	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0026	cloud	direct	high	296	0.997	GCA_003490935.1_01104
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	275405	276595	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	14355	15545	GCA_003490935_1_3_248	GCA_003490935_1_3_248	-	365085	.	PDB:3D37_A	Tail-protein	MFDLNLDNHRTPAFKVQITTKDKKQQDITQVISSRLISLSLTDNRGLEADTLDLELSDHDGKLALPTRNATIQVALGWKGKPLIDKGQYSVDEVQFSGGAGSADRLTIRARAADLKGSFSEQKERSFDKKTLGEIIDTIAKENQLKSQCEKKLANTFIAHIDQTNESDINLLSRLAEEHGAMCTVKNGTLLFMSLGQSKTATGKPIPLRKITRKSGDNYNFSIAESENYKAVRAYWHDTDTGKRGEITVDENTKIVKKQRMTQGRTLKNGTVKGRRLSKRKYNTIEQQEPITSDNAQIKSLRHTYASEKTAINAAKSAFDKLKRGVATFSLNLAFGEPDLIPETPIELSGFKAEIDATNWLITKVTHNLSDGGFTSQIECELKVEEDEVEVKKEKK*	common_virus_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0027	shell	direct	high	1190	0.999	GCA_003490935.1_01105
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	276595	277032	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	15545	15982	GCA_003490935_1_3_249	GCA_003490935_1_3_249	-	365085	.	COG3499	Phage protein U  [Mobilome: prophages, transposons]. 	MFQNFSLATLGMFVFTRQTVPFQSLDRTSNWRHPTNAIVGAMPKSQFTGKESETVTISGRLIPEITGGRFSIKALELMADSGGAFPLIDGATFEIIGFFVIESVQETRTEFFGDGAPRAIDFSMSLKRTDDPMLIAIAESLMSSL*	mmseqs_cdd	nonviral_gene	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0028	shell	direct	high	437	0.998	GCA_003490935.1_01106
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	277094	277219	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	16044	16169	GCA_003490935_1_3_250	GCA_003490935_1_3_250	-	365085	.	.	hypothetical protein	MKQKLIDYLLNMPRHIVWRGIFILSIAFWLLVIFGIAFLFR*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0029	cloud	direct	high	125	0.992	GCA_003490935.1_01107
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	277200	277346	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	16150	16296	GCA_003490935_1_3_251	GCA_003490935_1_3_251	-	365085	.	pfam06528	Phage P2 GpE. This family consists of several phage and bacterial proteins which are closely related to the GpE tail protein from Phage P2.	MIAATVEDAMADIAIIFHWQPQAFEQMTFSELMQWREKARKRNETETD*	mmseqs_cdd	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0030	shell	direct	high	146	0.993	GCA_003490935.1_01108
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	277346	277645	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	16296	16595	GCA_003490935_1_3_252	GCA_003490935_1_3_252	-	365085	.	PFAM:PF10109.8	tail-assembly-chaperone-protein	MKTENTKIITLTNPITRGENQITEITVNKPTVPALKGLKMFDVLQMDVDALQVLLPRVTSPVLHKADFATMEVADFTELAAAAVGFLGKNSEVETEATE*	hallmark_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0031	shell	direct	high	299	0.997	GCA_003490935.1_01109
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	277731	278237	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	16681	17187	GCA_003490935_1_3_253	GCA_003490935_1_3_253	-	365085	.	PFAM:PF04985.13	tail-tube-protein	MALPRKLKLMNFLADGNSYRGQVTEITQPKLAMKLEAYRAGGMIGEVKVNQGIEPLDVQFKMGGYMTELLKKFGGSIDGTALRFAGAYQQDDTEEVTSIELVMRGRFGEIDNGTSKPGDDTEQSYTVPLTYYKIIENGKDIIEIDLLNSIFIVDGNDRLAEHRAAIGI*	hallmark_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0032	shell	direct	high	506	0.998	GCA_003490935.1_01110
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	278241	279425	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	17191	18375	GCA_003490935_1_3_254	GCA_003490935_1_3_254	-	365085	.	PDB:3J9Q_C	sheath-tube	MTDEYLHGVKVTEISEALRTLTTSSTAVIGLVATAPDADASVFPLNKPTLLTGITAEMQAKAGKQGTLSRALDGIADIVNCKVVVIRVEENEDESTMKANVIGSVDNEGNYTGLKAFLVSAAVCGVKPRIFCIPKYDSQDVTTELLSVVKKLNGFVYASCGTAKTKEEAVTYGRNFSQRELMLIFGDFLSFNPNTKQTEVDYAVVRAAAMRAYQDKEYGWHTSISNKGLTGVTGVTKPLSFDINDSATDVNYLNEQGITCCVNHNGFKFWGLRTRSADKLFIYENYTRTAQVLKDTIAQSFDWAMDKDISVNLVKEIVEAINAKWREYVAQGYLIGGKAFINANLNTAATLKDAKLLVSYDYCPVPPLEQLGFNQYISDEYLVEFAANIAKVGA*	hallmark_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0033	shell	direct	high	1184	0.999	GCA_003490935.1_01111
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	279586	279948	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	18536	18898	GCA_003490935_1_3_255	GCA_003490935_1_3_255	-	365085	.	.	hypothetical protein	MEKLEINQQDQGFAYQVGKDIAQLQETVAALQTAATAQQGTKNQWVQKLTLKPGSTESWFNVKVNPELVGKVGMALFANATVEKAYFKEIYEMPVDASFFPAYLIAFADPAQVDFVSEVG*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0034	cloud	direct	high	362	0.997	GCA_003490935.1_01112
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	279929	280081	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	18879	19031	GCA_003490935_1_3_256	GCA_003490935_1_3_256	-	365085	.	.	hypothetical protein	MQTIQVKPKQTVQIKVQPCVKLAILAMFDSALFKIYNQAKEDYKNGKVRN*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0035	cloud	direct	high	152	0.993	GCA_003490935.1_01113
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	280081	280422	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	19031	19372	GCA_003490935_1_3_257	GCA_003490935_1_3_257	-	365085	.	.	hypothetical protein	MAEIIFNWIRGDDEVETLVFTEENGEPLDFTGSRFDCDIVPFGSANEKIHLSTDNQGILINGNEVSLIIAHEQTENVTWKEARFDLQQTTPDGKIKTWCNGKVRLQHDITRRV*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0036	cloud	direct	high	341	0.997	GCA_003490935.1_01114
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	280415	280687	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	19365	19637	GCA_003490935_1_3_258	GCA_003490935_1_3_258	-	365085	.	.	hypothetical protein	MAKTLKSWGYHVLVAIDQLFNALIGGAADETLSSRTYRGAILAENPKKRWRVLYRFINGIFFDRNHCKTAYESEVSGKQHDERFKAVQHG*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0037	shell	direct	high	272	0.996	GCA_003490935.1_01115
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	280672	281274	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	19622	20224	GCA_003490935_1_3_259	GCA_003490935_1_3_259	-	365085	.	PFAM:PF02413.16	tail-fiber-assembly-protein	MYYYDKKTNGFLVQGVNLIPEGAINITDEHYKQLLIGQSQGKQIIADKTGNPVLIDPQPSAAYELNLDTLTWEISGEKLTSLLAERKTHLLNVIANKTDNFKAQYLIGYSQAEIDSFYRQEREARNELPTMLLTEIFEGRDDLSSIEELKKKVIEKADLYAIIMGKIFAIKQGFEKHIEQAETAEQLDKIEQEINKWQKL*	phrogs_hmm	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0038	cloud	direct	high	602	0.998	GCA_003490935.1_01116
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	281287	283272	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	20237	22222	GCA_003490935_1_3_260	GCA_003490935_1_3_260	-	365085	.	PFAM:PF12571.7	tail-collar-fibre-protein	MASQYFAILTDYGTRAFAHALSQGKPVPLTQFAVGDGNGQPVTPTASATALVHQTHIAPVSAVSLDPRNNKQVIVELTIPENVGGFYIREMGVFDAQNKLIAYANCPESFKPTESSGSGKVQVLRMILKVESSSAVTLSIDNSVIFVTRQQMAPKTITATTQNGFDESGHTHEIAKASTTQQGITQLYSGYESESEDMAATPKSIKLLKVFIDTLTRNLSNYIPNSKKSSRVDSNSADDVATSEAVKKAYDKAESKWTAQAATENTAGILPISHKTDGTDKNKFASEYAVGEAAKKGLPLGAVVSFPRVVTNPVGFLRADGTTFNQQTFPDLYRVLGNSNQLPDLTRSDVGMTAYFAVDNIPAGWIAFDEIATQVTEQRYPELYRHLVGKYGSIDGVPKVADRFLRNAGNGLSVGQTQEDEFKRHVHKHIEINTASDPRFYNDKTFDYGSRDSTDRASLDIGTALRDDNDDNWWITPNINSKFATGGAETRPKSLILKLCIKAINSFDDVVFWIKSHGEVTNAGALDAGRLAQGLQDKADRNHTHTASQITDFNQSVKEIVTQSLTQGFTQNLAETGWCKLPNGLILQWGKFNKGHSFVSDEQRLVTFPISFPNKVLFVGLTEFTNGWSYSTTVENRQRMTNSGFYVISQRNDTMYFALGF*	hallmark_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0039	cloud	direct	high	1985	0.999	GCA_003490935.1_01117
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	283281	283820	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	22231	22770	GCA_003490935_1_3_261	GCA_003490935_1_3_261	-	365085	.	PFAM:PF09684.9	Tail-protein	MMITNHLLPIGSTPLEKRAAEILKSAVENPIIIADLINPERCPADLLPYLAWAFSVDKWDENWTEEVKRIAIKQSYFVHKHKGTIGAVKRVVEPIGYLIELKEWFQTNPQGTPGTFSLTMEVSESGLNEQTYNELVRLINDVKPVSRHLNQLAIAISPTGALRTFIGQQCGEIITVYPQ*	hallmark_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0040	cloud	direct	high	537	0.994	GCA_003490935.1_01118
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	283807	284721	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	22757	23671	GCA_003490935_1_3_262	GCA_003490935_1_3_262	-	365085	.	CDD:PHA02568	baseplate-assembly-protein	MSELVDLSKLDAPKVLEDLDFESLLADRKAEFIALFPQDERAFWQARLSLESEPITKLLQEVVYLQLMERNRINNAAKATMLAYASGSDLDVIAANYNVKRQVIQEANNNVTPKIPEILEDDTSLRLRTQLAFEGLSVAGPRSAYIFHALSAHPDVADVSVVSPQPANVTVTILSRNGQGEAEESLLNVVRAKLNDDDIRPIGDRVIVQSAVIQSYEIRAKLHLYRGPEYEPIKAAALKKLTAYTEEKHRLGRDISLSGIYAALHLEGVQRVELISPTADIVLPSSKSAYCTAINLEIVTSDDY*	hallmark_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0041	cloud	direct	high	914	0.999	GCA_003490935.1_01119
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	284718	285089	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	23668	24039	GCA_003490935_1_3_263	GCA_003490935_1_3_263	-	365085	.	CDD:PHA02516	baseplate-wedge-subunit	MANEPLTQRHSMNRYTGEILKNESDHIKQSIADILLTPVGSRIQRREYGSLIPLLIDRPISHTLLLQLAACAVTAINRWEPRVQITQFKPELVEGGIVASYVARSRKDNQEMHNEKLFLGHKQ*	common_virus_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0042	shell	direct	moderate	339	0.911	GCA_003490935.1_01120
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	285058	285657	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	24008	24607	GCA_003490935_1_3_264	GCA_003490935_1_3_264	-	365085	.	PDB:3VTO_Q	central-spike-protein	MPMSAELQRKLDNIIRFGVIAEVNYATARARVKSGDILTEFLPFITFRAGTTKTWSPPTVGEQCVMLSVSGEFTTACILVGLYTQNSPSHSADEHVIEFADGAKVTYNQSSGALVVTGIKTASITAANQIDIDCPTINIKGNVNIDGSLSTTGTSTTKGNISTQGSVTASGDIKGGAISLQNHVHVEQGDGQRTSNAKA*	hallmark_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0043	shell	direct	high	594	0.99	GCA_003490935.1_01121
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	285762	286193	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	24712	25143	GCA_003490935_1_3_265	GCA_003490935_1_3_265	-	365085	.	.	hypothetical protein	MKIELSKQFKEGRLNTPFFKDIQAMSDKELKLIFDFMQSIEQGKQLRGKNKPSWIDDNLNDIPNTEVYQENNIWHYHCGPYDNGTSYCPMSDLKMNLNGETSGPVIHYQKISDEHIVIIAFSPQHEPFPRAWDTPNPIIDRTE*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0044	cloud	direct	high	431	0.998	GCA_003490935.1_01122
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	286202	286759	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	25152	25709	GCA_003490935_1_3_266	GCA_003490935_1_3_266	-	365085	.	.	hypothetical protein	MTNLSLNPIFESFAPIFKQLKVAAMSALFIAPLAMNHPVRHSTHTVNIFSVKADENKSLNQQDIEKIIDMVKAVSAITDFVIASITAESLSYIDLNDVLRLENKINKYDGLVHNIIANNKSPELSTTLQSFSNKMHTLCNMMKSEKYKQQSDEVVLSRIYHKSEDAGYTYKSSHSFDDFKKAVMM*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0045	cloud	direct	high	557	0.998	GCA_003490935.1_01123
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	286861	289518	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	25811	28468	GCA_003490935_1_3_267	GCA_003490935_1_3_267	-	365085	.	Uniprot:A0A0A8U8Z7_ECOLX	tail-tape-measure-protein-	MNNLQIQIILNSVDKATAPIKAIAGRAEALAEKVKHAQKALSGLDKTKNLAEKFKALRNETNSYAKALDTAKANSKQLQSAVDSNTAKFNSITGKLGNATQQLNKHKEEVIRLKSVYNNMSIPLAKGMGFKSFNDARSSIARQIETQKKAIKDSNEQIKKLKSERKATEQAVKSTTKALDGEKETINKINKEYKPHVEQLKKIQEQLHKAGFSTKHFAQSEKQLSADIEKANNKLAKHQRMLALVERAQARFARIKAPISSALNTGRNIAGVGVQASIGGQQIMQPIISMGRGVVEMAQVAGKFEQFQSVLEVTEGSSEKAKKSFDWVKKFAVDTPANLDEAMEAFVRLRAYGMDPTNGLLQTLGDTASAMGKPVMQAVEAIADAVTGENERLKEFGIKGSAIKGTKFIEYTYTDKNGKQQSARVDKNNRKQIEETLKRIWNEKYSGAMEKQSKTLLGIWAKLDDVWASFQMKIMENGAFDWIKDKLQFLLKKFDELEQNGELKKWAKDIGTVINEVIQGLWDFGQTVFEAVKWLAQFASQNKGAIATIVKFTAIAGVALMALAPLLFTLSLVAPVLQVLGSTFLWVGKVAITAILGIGKAMLANPILAVIALIIGALVYLWQNWDEVKAKLIEGWNWLSEQAGQIWQNIVNSVTEKWNVLSAKVGEITNSVGEFFREKWEGITDTAKNFGSNMMNKLKDGVLESFKNVQQAISSTVDWIKEKLGFSKDTEKQIEQTKQNIANVTNNAENNVPNINKWSGGYAGNGGKFEPKGIFHGGEYVMTKEATSRLGVNTLNALNYGKQALIAGGLGISVATAAPVQVDTRAPISARPVVTQSSQPMSVNITINAAQGMDERAIAQQVAKEIQRIENQRQARARSSMWDRS*	hallmark_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0046	cloud	direct	high	2657	1.0	GCA_003490935.1_01124
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	289592	289939	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	28542	28889	GCA_003490935_1_3_268	GCA_003490935_1_3_268	+	365085	.	.	hypothetical protein	MKNKRTSRTLIMLNIAMWSLVIISTCLHYQFNPFSFIWFDVIAPVGHFFAVVFSALSSFTVSMYELFKPETFWGWVWFVVFVVPIICLPLYVVLLVLFAGKLSHHDTVIPPSYLK*	.	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0047	cloud	direct	high	347	0.997	GCA_003490935.1_01125
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	289940	290401	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	28890	29351	GCA_003490935_1_3_269	GCA_003490935_1_3_269	-	365085	.	PFAM:PF05069.12	Virion-morphogenesis-family	MATVEEIQAKLTTLIANLSPQARRQLGRKIGQALRKSQSNRIARQQNPDGSAFEPRKPRKEFRKKKGRIKRKAMFAKLRTARHLKVRSNGNEVSVGFNGSSAAIAAVHQYGLTARPSKEKDFKVRYAQRELLGISEQDLSMLNELVIEQISKS*	hallmark_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0048	shell	direct	high	461	0.998	GCA_003490935.1_01126
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	290401	290871	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	29351	29821	GCA_003490935_1_3_270	GCA_003490935_1_3_270	-	365085	.	PFAM:PF06891.10	tail-completion-protein	MKKPNQLRKILEQSHPDFVKNPDHLQLYVDGGQIVATGAASFSFEYRYTLNVVVTDYAGDIATLIVPMMAYLRTNQPEILENPQIRENAFKFQVDYNNNNTADISFEIQLTERVVSKKDGNNVQIHYAKEPVWDEPTRVKVYLENWDSPIFEGDIV*	hallmark_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0049	shell	direct	high	470	0.998	GCA_003490935.1_01127
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	290868	291083	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	29818	30033	GCA_003490935_1_3_271	GCA_003490935_1_3_271	-	365085	.	PHA00080	DksA-like zinc finger domain containing protein	MTDQFDRAQQLEEMQREIALKKHRTFKAVSRLYCEDCDAPIPEKRRQMIQGVTRCVTCQQRFEMQQRNFRK*	mmseqs_cdd	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0050	shell	direct	high	215	0.995	GCA_003490935.1_01128
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	291258	291608	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	30208	30558	GCA_003490935_1_3_272	GCA_003490935_1_3_272	-	365085	.	CDD:TIGR03495	phage-lysis-regulatory-protein	MFNFLTEKERGILLIGPILLVLLIIFLGFEANYWRKEMLKEEQLKLKWQNSYIELNHSVQNFAEQQAQLIQAVNNLKANQNQQTQDLKNVLKSNQDWADRPLPDDVKRVLNSTGSH*	common_virus_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0051	shell	direct	high	350	0.997	GCA_003490935.1_01129
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	291593	292111	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	30543	31061	GCA_003490935_1_3_273	GCA_003490935_1_3_273	-	365085	.	CDD:cd16901	P1-lysozyme	MIKRSAKYICAISAVVGLVIATHGNEIRTSEKGLLLIGNAEGCMKKPYQCPADVLTVGIGITDAVEKIDRNKIYTLQEIAELYVKGIKQSEKCVNQYANGQTMPQGAFDALVSITFNVGCGKLKNSSLFKMARQGYSKAMCSQFERWIYAAGKPLKGLIERRQKEKNLCLIS*	common_virus_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0052	shell	direct	high	518	0.998	GCA_003490935.1_01130
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	292104	292325	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	31054	31275	GCA_003490935_1_3_274	GCA_003490935_1_3_274	-	365085	.	pfam16080	Bacteriophage holin family HP1. Phage_holin_2_3 is a family of small hydrophobic phage proteins called holins with one transmembrane domain. Holins are produced by double-stranded DNA bacteriophages that use an endolysin-holin strategy to achieve lysis of their hosts. The endolysins are peptidoglycan-degrading enzymes that are usually accumulated in the cytosol until access to the cell wall substrate is provided by the holin membrane lesion.	MHDTPSKASYISGIFAFLIGRIADMFSNVNWADVASVTGIVIGVATFLVNWYYKKKDFELKEKELEQRIHHHD*	mmseqs_cdd	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0053	shell	direct	high	221	0.995	GCA_003490935.1_01131
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	292327	292536	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	31277	31486	GCA_003490935_1_3_275	GCA_003490935_1_3_275	-	365085	.	COG5004	P2-like prophage tail protein X  [Mobilome: prophages, transposons]. 	MQVYAQQNDNLDAILYRHFGRSEGLLEITCELNPHLMDKPIIPIGTPVILPDADTEKISVANDTIQLWS*	mmseqs_cdd	nonviral_gene	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0054	shell	direct	high	209	0.995	GCA_003490935.1_01132
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	292536	293042	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	31486	31992	GCA_003490935_1_3_276	GCA_003490935_1_3_276	-	365085	.	PFAM:PF05926.10	head-completion-protein	MSDGAISVKLAPDYEMGKVQQQLNDYDTLDDIISNDGFFPDMSLAQFRNQYRADGTITTQRLQDALIEGMASVNAELSTFKTQSKRDSLEQISAPYINGESVLIYRYKRAVSCLALANLYERYASYDSTNDGEKKMAQLKDSIDELRRDARFAISDILGRKRVDAELI*	hallmark_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0055	shell	direct	high	506	0.998	GCA_003490935.1_01133
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	293167	293829	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	32117	32779	GCA_003490935_1_3_277	GCA_003490935_1_3_277	-	365085	.	PFAM:PF05944.11	small-terminase	MAERLSPAQIHLRTISAAVAHAAETEDLSDFTEYDKMCRILARHRKDLKNIQSTERKAAFKKQILPDYLPWIEGALSVGSGKQDNVLMTWCVWAIDCGEYHLALQIADYAVFHDLRLPEPFTRTLGTLLAEEFADQAKAAQAANKPFEVAYLEQVQRITADCDMPDESRARLLRELGLLLVEKHPEQALAYLERALGLDQKIGVKGDIKKLRKQLNKADE*	hallmark_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0056	shell	direct	high	662	0.998	GCA_003490935.1_01134
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	293829	294860	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	32779	33810	GCA_003490935_1_3_278	GCA_003490935_1_3_278	-	365085	.	PFAM:PF05125.11	Major-Capsid-protein	MRNETKQKFNAYVARVAELNGVTSNDVAETFTVTPSVEQKLIEKVMLSSNFLQWINVVRDPLMEAELVGLEVASAIASTTDTNTKERETKDVSKMTGRKYKCEQVNFDTHIPWAKLDQWAKHPDFQKKLANLTQKTIALNLIMMGLNGTSRSETSDLSSNPKLQDVKKGWLQQLRDDMPTHVMNGANTENKIKVGKGQAKNHGYENIDALVLDAVNTLIDEVYADDTELVVICGREILNDKYFNIVNTDLKPTDDLASQVIISQKQIGGLKAIRVPFFPKNSILITRLDNLSIYIQEGSMRRFIKNNPKRNRVEDYLSQNIDYKVEEYGCAALIENITFEDKE*	hallmark_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0057	cloud	direct	high	1031	0.999	GCA_003490935.1_01135
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	294871	295698	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	33821	34648	GCA_003490935_1_3_279	GCA_003490935_1_3_279	-	365085	.	CDD:pfam05929	capsid-scaffolding-protein-serine-peptidase	MAKTSKWFVVATEGATTDGRTINRTWIEQMAANYDPKKYGARVNLEHIKWRYMWNDDPHSKCYGDVVGLKTEENAEGKLQLLAQIDPTDDLIKLNKDRQKIYTSIECDPNFADTGEAYLVGLAVTDNPASLGTEMLVFSAGASANPLNNRKEKAENLFTAAIETELEFEEVKEKGLSVFAKIRALFADKEKTDDERFADQTQAIELLAEQTKETLEKLTALSADLAKQQTELTEVKATNESIQAKFTTLEKAPSADFGKRPIVAGEGKSEFLTDC*	hallmark_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0058	cloud	direct	high	827	0.999	GCA_003490935.1_01136
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	295863	297644	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	34813	36594	GCA_003490935_1_3_280	GCA_003490935_1_3_280	+	365085	.	CDD:PHA02535	terminase-ATPase-subunit	MDEQVINQPSPEVTAEIKRKAQQMYFSGYKIAEISRQLDIPASTIASWKDREKWDDIAPVGRVELALETRLNMLIAKEEKSGSDYKEIDLLGRQMERMARVKKYSFGDGNEVDLNPKLANRNKGDRKKAEPNAIDQEQEELLINGFLDGMFNYQRIWHKAKEHRIRNILKSRQIGATYYFAHEAFIDALTTGHNQIFLSASKKQALQFRSYIVNYAKQTADVDLKGETIKLPNGAELIFLGTNSATAQSYHGNLYFDEVFWVPKFDVMRKVASGMAAQKMYRQTYFSTPTTIAHPAYAFFSGKAFNKNRAKADKVEIDISHENLKSGKLCADRQWKQIVSIYDAMEGGCNLFNIDDLIAENSKEEFEQLFLCQFADDNSSAFKFSDLQLCQVDSLEEWHDYKPFYQRPFGNREVWLGYDPAFTGDRAALVIVAPPKVEGGDYRVLHKQTFHGMDYETQASRIKQFCDDYNVTRIVIDKTGMGSGVYQEVRKFYPMAQGLEYNADLKNEMVLKTQNLIQKRRLKFDSGDNDIVSSFMTVKKRITGTGKITYISDRSEDASHGDLSWAIMNCILNVPYGLGGDVSSNKSTIFTFE*	hallmark_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0059	shell	direct	high	1781	0.999	GCA_003490935.1_01137
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	297654	298664	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	36604	37614	GCA_003490935_1_3_281	GCA_003490935_1_3_281	+	365085	.	CDD:PHA02536	portal-vertex-protein	MSKNTKKSTALSTGNQAQAFSFGEPIPVLDRAEVLNYFESVLMYEKYYNPPINLSYLAKALNASAHHNSAITVKKNILLSTCKTTALLSRTQLEKLVQDYLVFGNAFIEVVKNAFGDVIALRSPLAKYMRVGIDEGQFFQIVTGYEEYEFKKGSVLQLINPDINQEIYGVPEYLAALQSAFLNESATLFRRKYYLNGAHAGSIIYMTDPTQNQDDIEAIKTQIRQTKGTGNFKNLFVYIPNGKKDGMQVIPLSDAIAKDDFLNIKNASRDDVLAAHRVPPQLMGIVPNNTGGFGDVEKATRVFFINEIIPLQERLKEINSWVGEEVITFSDYKLLN*	hallmark_hmm	common_virus	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0060	shell	direct	high	1010	0.999	GCA_003490935.1_01138
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	299233	299637	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	38183	38587	GCA_003490935_1_3_282	GCA_003490935_1_3_282	-	365085	.	pfam06295	Protein of unknown function (DUF1043). This family consists of several hypothetical bacterial proteins of unknown function.	MENWTNEIWVAIGIAFIVGLFIGYIIVRLTKGSVKHQAKTEAELKTVKTQLDTQKAQIEKHFAESAELFKTLINDYQKLYRHYATSSNNLLGEKDHKGLFTQQLITATDKSQNEQPRDYSEGASGLFKEKKEEN*	mmseqs_cdd	nonviral_gene	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0061	persistent	direct	high	404	0.998	GCA_003490935.1_01139
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	299667	300017	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	38617	38967	GCA_003490935_1_3_283	GCA_003490935_1_3_283	-	365085	.	cd06150	This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function.  The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	MTIQRILPSSRLSEISIHNNLAYFAGQVPELTIEQNAYEQTKEVLGLIDKLLAEIGSNKSNILTAQIFLADMQDYAQLNQAWDEWVDHVSPPSRATVEAKLADPHWKVEIVIIATC*	mmseqs_cdd	nonviral_gene	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0062	persistent	direct	high	350	0.997	GCA_003490935.1_01140
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	300129	300845	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	39079	39795	GCA_003490935_1_3_284	GCA_003490935_1_3_284	+	365085	.	pfam14256	YwiC-like protein. The YwiC-like protein family includes the B. subtilis YwiC protein, which is functionally uncharacterized. This domain family is found in bacteria, and is approximately 130 amino acids in length. There is a single completely conserved residue G that may be functionally important.	MKLLISNQHGAIVMALVPFIYGMLLANPVWAHVFLLLGWFSLYLMTYPFLNLFKGKNLELYKKWSVIYFAAAVIFAIPALIYNWQVLYFMFAMLPFVAVNIYFTKKKDERNLWNDLAGILIFALAGMGSYYFSDRTFDEKILWVAIYPTLFFIGTTLYVKSMMRERKNPRYFWASVIFHLLCVLIFVVSQQFILALAFVPGLVRAVYLPTKKLSVMQVGLTEFAITAVFFILLLTATL*	mmseqs_cdd	nonviral_gene	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0063	persistent	direct	high	716	0.999	GCA_003490935.1_01141
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	300846	301388	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	39796	40338	GCA_003490935_1_3_285	GCA_003490935_1_3_285	+	365085	.	COG0790	TPR repeat [Signal transduction mechanisms]. 	MKLKLFFHTVLLFCSLPICAMKTVDITASSKMDDQARMNLAQDFVNKQQWMSVFDIMYPMALEGNITAQSNLGMLYNLGRGTVRDYEKAYWWFSEAAEKGSVKGLNNLGVMYLRGDYVKQNTEQAIKLFERTARAKDTDAMMMLSNIYRSQNQSEKSLEWLKKAAELGNKEAKQRLSSQP*	mmseqs_cdd	nonviral_gene	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0064	persistent	direct	high	542	0.998	GCA_003490935.1_01142
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	301402	301809	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	40352	40759	GCA_003490935_1_3_286	GCA_003490935_1_3_286	-	365085	.	cd04784	Helix-Turn-Helix DNA binding domain of the CadR and PbrR transcription regulators. Helix-turn-helix (HTH) CadR and PbrR transcription regulators including Pseudomonas aeruginosa CadR and Ralstonia metallidurans PbrR that regulate expression of the cadmium and lead resistance operons, respectively. These proteins are comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the C-terminal domains have three conserved cysteines which form a putative metal binding site. Some members in this group have a histidine-rich C-terminal extension. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements.	MKIGALAKALGCTVETIRYYEQQGLIPPPKRTSGNFRQYNEEHLQRLSFICNCRNLDISLSEIKSLLNLENASKQQAEEINRVLDKHIKEVATRIHELAHLRMKLIELREKTVSNDEDPMKLLLQHSGVKFVRLK*	mmseqs_cdd	nonviral_gene	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0065	persistent	direct	high	407	0.998	GCA_003490935.1_01143
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	CDS	301899	302582	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	40849	41532	GCA_003490935_1_3_287	GCA_003490935_1_3_287	+	365085	.	PF10670.9	Domain of unknown function (DUF4198)	MELKKIVVGLTALLGMSVANAHNVWLEPASAKGEYVVKFGHEQTETYPESKLKSIQALNAQGKLTAVDYQFRNGEAYLMPKSDLVFVHFDNGVWSKLPSGKYVEKTKREEPTAEFSTNPVKFGKAILKWDAESFKSHQQAYELVPQEKAQANKPLSILVLHNGKPVQGIKVGVSEDAPFNLTNEKGIAQFTPTKGFNKVWAEFEEKVTNNADYDRRSIEYMLTFDAQ*	hhsuite_tools	hypothetical_protein	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_CDS_0066	persistent	direct	high	683	0.999	GCA_003490935.1_01144
GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote	cenote	tRNA	264265	264341	GCA_003490935.1	QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935.1_QQGD01000003.1	GCA_003490935.1|QQGD01000003.1	GCA_003490935_1_3	GCA_003490935_1_3@C18	3215	3291	tRNA-Val	tRNA-Val	+	365085	.	tRNAscan-SE score: 70.7	Val	NA	tRNAscan-SE	.	C18	41532	261051	302583	GCA_003490935.1|QQGD01000003.1@region_261052_302583@tool_cenote_tRNA_0001	.	.	.	.	.	.