core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	8387	9463	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	1	1077	GCA_003494195_1_1_10	GCA_003494195_1_1_10	+	514671	.	PRK11671	membrane-bound lytic murein transglycosylase MltC. 	MKKYLVLALLPLLYACSDSLSRGGMNYDESFAKDTQGLDILTGQFSHNIDRIWGVNELLVASRKDYVKYTDSFYTRSHVSFDEGNIVIETQQDLNRLHNAIVHTLLMGADAKGIDLFASGDVPISSRPFLLGQVVDHQGQQIANQVIASNFATYLIQNKLQTRRLQNGNTVQFVAIPMIANHVEVRAQKYLPLVRKAAEYYGIDESLILGIMQTESSFNPYAISYANAIGLMQVVPHTAGRDVFAMKGKGGQPSTRYLYDPANNIDAGVSYLWILQNQYLDGITNPTSKRFAMISAYNSGAGAVLRVFDNDKDMAIYKINQMYPEQVYRILTTAHPSSQARNYLLKVDKAQKKFRVRR*	mmseqs_cdd	nonviral_gene	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0001	persistent	direct	high	1076	0.999	GCA_003494195.1_00014
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	10785	11975	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	2399	3589	GCA_003494195_1_1_11	GCA_003494195_1_1_11	+	514671	.	CDD:COG4653	Major-Capsid-protein	MLKKLIELRQQKAEKVAEMRAMLDKAEKENRSLDETESVDFDKLKDLVKQLSDEISKYETVADEERNLGAQSNPLETRSTKQFSNDELRHYIKTGELRNLTTANGEDGGYSVIPQLDKEVMKRLTDDSVMRQLCNVVRLPIGAKEYKKLVSAGGATVEHGTEGTARNGTASPKLHEVTIALNSIYAYPKTTQEILDFSSIDVLGWLTDEITETFTETEEVDLTSGDGNKKSKGLLTYERTTENDKVRPFGKLQKIEVAGAANIEADTLIDAFYTLHSKYRKNAVWVMSSTIAAALQKLKNKNGDYIWRDGLTTDAPATLLGRPVYFLETMPTGGANQAVIAFGDFKRGYFIVDHETGVRTRPDNLTEPGFYKVHTDKYLGGGVVDSNAIKVIETTA*	hallmark_hmm	common_virus	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0002	shell	direct	high	1190	0.999	GCA_003494195.1_00017
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	12021	12587	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	3635	4201	GCA_003494195_1_1_12	GCA_003494195_1_1_12	+	514671	.	CDD:COG3740	head-maturation-protease	MKKEFEIRSATISTDEENQKLVGYAVKWNSPSQVLYCDFVESFAPKAFSESLASGEDVRALFEHDYTKLLGRTSAGTLKLEEDSIGLRFELTPPDTTLGRDLLVSVERGDISGMSFGFWAKEETWNFDVEPCQRTVQKAELFEVTVTSIPAYPESSVEIAKRSMVAAKEKTQKHSTALLKQWLDVMEA*	hallmark_hmm	common_virus	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0003	shell	direct	high	566	0.998	GCA_003494195.1_00018
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	12589	13821	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	4203	5435	GCA_003494195_1_1_13	GCA_003494195_1_1_13	+	514671	.	CDD:COG4695	Portal-protein	MWNPFRRKEQRSEPTTIEELLSYIGVNNTGAGEFVSPQTAESLPAVMNAVTVISEAVASMPCYLYALKEDGRERIYRHPVEYLLNEMPNRSQTPYQFKNTMMRHCLLNGNAYAVIEWNNKGEPISLTPYQPSAVNIFRKVTGEYIYQITDLNGVTKNYLQDEILHLRHSSVDGFMGRSPITVCRETVGLGLAQQRHGAAIMKNGLMASGLISTAEWLDDAKAQKAVKALERYKGAKNAGKTPILEGSMEYKQLGMTNQDAEWLASRTFTISDIARIYNISPIFLQDYSNSSYANFSEASRAFLSQTLRPWLTNFEQQLKDALIIDLGSNSKKRYLIEFDTSDLLRTSQSERFSSYDVAIKAGVMSPNEVRRREGLPPYEGGDEFSQAWKQTVEVKRGDEQEQGASNGSDA*	hallmark_hmm	common_virus	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0004	shell	direct	high	1232	0.999	GCA_003494195.1_00019
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	13805	14149	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	5419	5763	GCA_003494195_1_1_14	GCA_003494195_1_1_14	+	514671	.	PDB:2KZ4_A	Head-tail-adaptor	MAVMLKAGKYNKVIDLQKQVNEQNDYGGIVSKWRTISNVRAAVEPLQGREFFSGAVPLGENIVRVRVRYGIEVDRTMRVKYGTRLLEITNIIDSKESHRELQLICKELLGNGTN*	hallmark_hmm	common_virus	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0005	shell	direct	high	344	0.997	GCA_003494195.1_00020
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	14136	14444	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	5750	6058	GCA_003494195_1_1_15	GCA_003494195_1_1_15	+	514671	.	CDD:TIGR01560	uncharacterized-phage-protein-(possible-DNA-packaging)	MAQIELEEIKQHLNLDHYLDDELLETYKVATLEVCQKHIGKTFGDEETENTVPFTPSIKVGCLMYIAYLYTNREAITDLANLKQAPMTISALWEVYREPCAY*	hallmark_hmm	common_virus	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0006	shell	direct	high	308	0.997	GCA_003494195.1_00021
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	14455	14811	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	6069	6425	GCA_003494195_1_1_16	GCA_003494195_1_1_16	+	514671	.	PDB:5H0M_A	HNH-endonuclease	MPYQPLRRCSYPGCRNKVKSGRCEEHKPKDNRPSSRARGYDHKWSKYRAQYLKHHPLCVMCLEKGIYTPATVIDHIKPVENGQADPLFWVESNHQSLCRDCHSYKTRVIDQRGFGAKK*	common_virus_hmm	common_virus	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0007	.	unmatched_CDS	none	0	0	.
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	15041	15415	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	6655	7029	GCA_003494195_1_1_17	GCA_003494195_1_1_17	+	514671	.	CDD:COG3747	Small-Terminase	MTAKKKNLHTPPSFLDPIAKSVWKERIPQLLERGDIQDADLIHLELYCVNYSLFRAAVEDIHKNGFSIVNSQGTQSRNPALSAKADAEKVMVKMSSLLGFDPVSRRKNPVEVDSTDMIDEILTM*	hallmark_hmm	common_virus	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0008	shell	direct	high	374	0.997	GCA_003494195.1_00022
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	15423	17090	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	7037	8704	GCA_003494195_1_1_18	GCA_003494195_1_1_18	+	514671	.	CDD:COG4626	Large-Terminase	MAIWHEYAEKIQSGEIVACKKIKQAVARYFNDLNNPDYFFDQSAVEKFIAFSKLCPHVKGHLRGEPIILSDWQVFLFANILGFKRKDTGLRKYRSAYVQVARKNAKSTVAAVLANWFLVMEGGQQDIYTAAVSRDQARIVFDDARQMCLLSPLLKKRLNIQQHKLINPKNNSIMRPLAAKSSTIEGTNPSLAIVDEYHLHTDNSVYSALELGQGARPEGLLFAITTAGSNVISACKQHYDYCAQILEGNEQNDSLFVLIFELDEENEIDKQENWIKANPNIGKSIPYLDFENTIKKARGIPSEWVEMLTKRFNVWCQGTTPWLGEGNWAQCERQYTESDLLHQDCYLGLDLSSTNDLTSLCYTFPQGKKVRLITRHYIPEFQLNNVANKNRAMYRNWVRSGWLIATEGDCIDYDKIRDDILKDAQRFNIKMIGFDVWNATHLRTQLQAAGLEVEPFPQTYQRFSPVAKSAEVLINRQIIEHHGDPVLTWALSNVVMETDANANIKPNKKKAANKIDPAIAFLMSFGTYQLEYGDLIFELSDEHRKIIDEFTGLDL*	hallmark_hmm	common_virus	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0009	shell	direct	high	1667	0.999	GCA_003494195.1_00023
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	17411	17698	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	9025	9312	GCA_003494195_1_1_19	GCA_003494195_1_1_19	+	514671	.	.	hypothetical protein	MIRCKEAKQNLLLSAVKHYKKNNHTFTFISLYDNEEPYPIEEVIYALRCKCDAAKREIDSRPNSPNMEVLETIYHIAHKNLEDMKKAKSRIEQKA*	.	hypothetical_protein	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0010	cloud	direct	high	287	0.997	GCA_003494195.1_00024
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	17896	18276	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	9510	9890	GCA_003494195_1_1_20	GCA_003494195_1_1_20	+	514671	.	.	hypothetical protein	MIKSVLSAFGSFVFSALDFLLFLAILLFVGLLVFIFWPILKWPLLAFLIGAIAFFCYLIYKIKEKPKPLEQDEILSSWAEQELQRPIIQQILQKQEENKPFISGTITHIGNDGKETRLGNITIHLK*	.	hypothetical_protein	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0011	shell	direct	high	380	0.997	GCA_003494195.1_00025
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	18384	19415	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	9998	11029	GCA_003494195_1_1_21	GCA_003494195_1_1_21	+	514671	.	.	hypothetical protein	MLLNLPPRKEYTLSQALEYLKNFHNETRINKEYLIYQAQQGRLKTVISLKGGRDFYTPTKDYRSTLEVISNHTLVDKKYFLINGETKIIATDISLKSTRELNREFDFYEMENNYLDIYFNTSKLKTMPKYPNENLIMGKKGGGEIRKIDNIQEFCFFGYFVLDPSEYEGNSVDIVQQGFICKKIYNEFEITERSETYFSFLLSYVNDGYSSFDGDFIINLDDILILHEDLLEFIGIDKRDNNEDHILEIEKLKKELEEKDKKIVELQTALEGKNFPIFLNQFMENDRLALAIQARKDYWANYDPNLNNAPKAESTAREIKEKYDLSKKQAEAIEIIACPINRN*	.	hypothetical_protein	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0012	cloud	direct	high	1031	0.999	GCA_003494195.1_00027
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	19574	19777	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	11188	11391	GCA_003494195_1_1_22	GCA_003494195_1_1_22	+	514671	.	COG3311	Predicted DNA-binding transcriptional regulator AlpA [Transcription, Mobilome: prophages, transposons]. 	MNLNLNPNQKLITGETACHIVGFGRTKLNLLVKAKKFPQPIRFSQNFVRWDLEEVNQWIEEQKAARA*	mmseqs_cdd	nonviral_gene	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0013	shell	direct	high	203	0.995	GCA_003494195.1_00028
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	19883	20821	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	11497	12435	GCA_003494195_1_1_23	GCA_003494195_1_1_23	+	514671	.	PF10554.9	Ash protein family	MNLIHKYYINNENFYNLNTLQSAVNFGIIFSQSEKVIASRGKLNYLLLANDSTPQNRAFFVRNIRTPKEYADFVFNLNPIILSMVERNEPSMTGCFPVETVFHLVTFYRPTVESLAVVPENLLLELTQMHQFIFALIRAPQIKIRLLADNEQQARSRFTDGDTLLFVGRINQNPLKNNRTLALPTLSVNNHSLPKCEDAGSIESTITRKGNRDPYQCGIFLPKIHSLHVPEKSGALSYIEFAVRLRDRNKALSTNQIRSFRGVVETVSHPMGDTSKNTKHGNPTMKIYPKNNRTLAALPTLSVSAEMEVAHG*	hhsuite_tools	hypothetical_protein	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0014	cloud	direct	high	938	0.999	GCA_003494195.1_00029
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	20814	21062	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	12428	12676	GCA_003494195_1_1_24	GCA_003494195_1_1_24	+	514671	.	.	hypothetical protein	MANRIIQVEQCQINLLKLQMDGLSQLESMLLALYINPDVFNEMDSFDIAYTIKGIKNLLSHIKIDMEERIAFIEGVQEVSND*	.	hypothetical_protein	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0015	cloud	direct	high	248	0.996	GCA_003494195.1_00031
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	21055	21255	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	12669	12869	GCA_003494195_1_1_25	GCA_003494195_1_1_25	+	514671	.	.	hypothetical protein	MTEQVNLPYQLIFVYDNGDQFIAGEYGTLREALQAKIRCKHEIGQADICGRVLEVISVLKGEDNES*	.	hypothetical_protein	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0016	shell	direct	high	200	0.995	GCA_003494195.1_00032
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	21245	21451	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	12859	13065	GCA_003494195_1_1_26	GCA_003494195_1_1_26	+	514671	.	.	hypothetical protein	MKAKKIKAFKAPYTPTPEQLEKSYKRIKQFLAFAEDYLHSGHYKGLAVSIEQIKKAATIRKVAQHETK*	.	hypothetical_protein	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0017	shell	direct	high	206	0.995	GCA_003494195.1_00033
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	21438	21986	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	13052	13600	GCA_003494195_1_1_27	GCA_003494195_1_1_27	+	514671	.	.	hypothetical protein	MKPSNPMQQLQQWKANNGKSNKLKNELVKSAVKSANQTNSGLVKNTQGNVGSETKNKLYANPLSFKFAQLSRQFKLILDSNRKCLEVYPDDFHHKIKFSDELTDLVVRLKTGGKLFNEMVKAQGAKLNPNNQETIRNFNQANDYLIHKFGEVIKQIEQLQVEYVNSVVLLKNEKNLIISEGK*	.	hypothetical_protein	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0018	shell	direct	high	548	0.998	GCA_003494195.1_00034
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	21988	22431	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	13602	14045	GCA_003494195_1_1_28	GCA_003494195_1_1_28	+	514671	.	.	hypothetical protein	MDMNQKLDYSKLSALELKAIAMSYRNMLENKGETFHSSLPYLNGAIEVLAEELADCPAMNIDELKILHDELLMVNKHLLQMAPKPPSSNPEEIVVTLTNDEIIDGLLKNSIALSLVKTFKYFQEVITDRINAIENGVIKGVNNGTIN*	.	hypothetical_protein	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0019	cloud	direct	high	443	0.998	GCA_003494195.1_00035
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	22415	24184	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	14029	15798	GCA_003494195_1_1_29	GCA_003494195_1_1_29	+	514671	.	PFAM:PF04735.11	DNA-helicase	MARLINAPHLADQPHEPYSDIFILAGRKAWQAWNNGKGEEWLLLCSLIHGLDRNIKPVILAESQLENISSIRIVKEDQQSVKLVQYGELAQAEITAICQNLAKNSNAIDVKLLDAAAQTKEDLSAYIQRLRNDKDTADFAEKIAPPEKLKEKDGTNKKSRAFQKWLNLDMALQRGCREIYAYDGKTWNKQENDDLEEKAVKFLDENEFNYSDSTIDRLIKTLKAQLPRMGEMSNDLIAFENGVLNRNTMEFESHNRQNWLTSFIPHKYDKQAADTPHFDKWLSFVSDGNKEKARNILAVLYAILTNRYNWQMFFEITGKGGSGKSVFASIATLLAGVKNTASSNLEKFDDERGLSGLENKTLILCPEQSKYAGDGSGLKSITGGDTVRVRYNYQDPFDVKITALVMLINNRPCSFTERSGGVDRRRVIFDFKKIVPEDERDPHFMDKITLEVGGIIRKVFDSFPDPNDAKNALKAQMESQEALEVKKLSDPLTDFFGYFYTTEQTDGLFIGVTNMGLDKIRTHLYPAYLAYTKAMNIGELGLNNFVIGVDQALKQNGNKHDFMKRHTKTGRRTNIHFKDFDSFRNEMLS*	rep_hall_hmm	common_virus	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0020	shell	direct	high	1769	0.999	GCA_003494195.1_00036
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	24356	25582	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	15970	17196	GCA_003494195_1_1_30	GCA_003494195_1_1_30	-	514671	.	PDB:1Z19_B	Integrase	MSRTKKPLTDTEIRKAKPKEKEYPLSDGNGLILRVKPNGSKIWLFNYYHPVTKKRTNAGLGMYPQIQLSDARAKREEYRALLAKGIDPQEEKIRIQQEYENRLKDTFHSVAESYFNGIYKEKAKNPETREKNWERLKNHIFPYIGDKHVSEIKVKELVSIYEKIADRSNTLKKIHQLVGAIMDHAITKGIIESHNCRLAVKNFYIKSSTPHPTIKLDELSKLFQDLANARIGKKTYLLICWSFLTALRPKEAVNAEWSEIDFDNKLWNIPKEKMKGQADKKRPHTVPLSSQAIQLLEVMKLFSENSSFVFAGRSSKNQPMNKATVNVALKRIGYKDKLTAHGIRAFIKTFLASHKVERNVSETILSHLLEGGDDLENTYNRYNYLEERKPIMQLIGDYCESCGMNLNL*	common_virus_hmm	common_virus	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0021	shell	direct	high	1226	0.999	GCA_003494195.1_00037
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	25899	26237	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	17513	17851	GCA_003494195_1_1_31	GCA_003494195_1_1_31	-	514671	.	COG1314	Preprotein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular transport]. 	MYQVLLFIYVVVAIALIGFILVQQGKGANAGASFGGGASGTMFGSAGAGNFLTRTSAILATAFFVIALVLGNMNSHKGNIQKGAFDDLSQAAEQVQQQAAPAKDNKNSDIPQ*	mmseqs_cdd	nonviral_gene	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0022	persistent	direct	high	338	0.997	GCA_003494195.1_00039
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	26346	28301	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	17960	19915	GCA_003494195_1_1_32	GCA_003494195_1_1_32	-	514671	.	PDB:5D5H_A	DNA-topoisomerase-1	MRLFIAEKPSLARAIADVLPKPHQRGEGFIKCGDNDVVTWCVGHLLEQAEPDAYDPKFKQWRLEHLPIIPEKWQLLPRKEVKKQLSVVEKLIHQADTLVNAGDPDREGQLLVDEVFSYANLSAEKRDKILRCLISDLNPSAVEKAVKKLQPNRNFIPLATSALARARADWLYGINMTRAYTIRGRQTGYDGVLSVGRVQTPVLGLIVRRDLEIEHFQPKDFFEVLAWVNPENKEEKTQEKSTALFSALWQPSKACEDYQDDDGRVLSKGLAENVVKRITNQPAEVTEYKDVREKETAPLPYSLSALQIDAAKRFGMSAQAVLDTCQRLYETHRLITYPRSDCRYLPEEHFAERHNVLNAISIHCEAYQVLPNVISTEQRNRCWNDKKVEAHHAIIPTAKNRPVNLTQEERNVYSLIARQYLMQFCPDAEYRKSKITLNIAGGTFIAQARNLQTAGWKELLGKEDDTENQEPLLPIVKKGQILHCERGEVISKKTQPPKPFTDATLLSAMTGIARFVQDKELKKILRETDGLGTDATRAGIIELLFKRGFLTKKGRNIHSTETGRILIQALPDIATQPDMTAHWESQLTDISQKQATYQQFMHNLNQMLPDLVRFVDLNALRQLSRIKMIKSDRVKPKSAVKKSSKSNGETD*	common_virus_hmm	common_virus	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0023	persistent	direct	high	1955	0.999	GCA_003494195.1_00040
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	28317	28919	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	19931	20533	GCA_003494195_1_1_33	GCA_003494195_1_1_33	-	514671	.	COG0353	Recombinational DNA repair protein RecR [Replication, recombination and repair]. 	MQSSPLLEHLIENLRCLPGIGPKSAQRMAYHLLQRNRSGGMNLARVLTEAMSKIGHCSQCRDFTEEDTCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLDLLQKRLVEESFHEVILATNPTVEGDATANYIAEMCRQHNIKVSRIAHGIPVGGELETVDGTTLTHSFLGRRQID*	mmseqs_cdd	nonviral_gene	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0024	persistent	direct	high	602	0.998	GCA_003494195.1_00041
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	28982	29311	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	20596	20925	GCA_003494195_1_1_34	GCA_003494195_1_1_34	-	514671	.	TIGR00103	DNA-binding protein, YbaB/EbfC family. The function of this protein is unknown, but it has been expressed and crystallized. Its gene nearly always occurs next to recR and/or dnaX. It is restricted to Bacteria and the plant Arabidopsis. The plant form contains an additional N-terminal region that may serve as a transit peptide and shows a close relationship to the cyanobacterial member, suggesting that it is a chloroplast protein. Members of this family are found in a single copy per bacterial genome, but are broadly distributed. A member is present even in the minimal gene complement of Mycoplasm genitalium. [Unknown function, General]	MFGKGGLGGLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKITINGAHNCRRIDIDPSLMEDDKEMLEDLIAAAFNDAVRRAEELQKEKMASVTAGMPLPPGMKFPF*	mmseqs_cdd	nonviral_gene	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0025	persistent	direct	high	329	0.997	GCA_003494195.1_00042
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	CDS	29480	30325	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	21094	21939	GCA_003494195_1_1_35	GCA_003494195_1_1_35	-	514671	.	pfam04378	Ribosomal RNA large subunit methyltransferase D, RlmJ. RlmJ is ribosomal RNA large subunit methyltransferase J is required for full methylation of 23S ribosomal RNA (rRNA) during ribosome biogenesis. The ribosomal RNA of E. coli carries 24 residues that require methylation, and this methyltransferase is the last to be described, that modifies A2030. RlmJ displays a variant of the Rossmann-like methyltransferase (MTase) fold with an inserted helical subdomain. On binding cofactor and substrate a large shift of the N-terminal motif X tail is induced in order to make it cover the cofactor-binding site and to trigger active-site changes in motifs IV and VIII.	MLSYRHSFHAGNHADVLKHIVLMLILENLKLKEKGFFYLDTHSGVGRYRLSSNESEKTGEYKEGIGRLWDQTDLPEDVARYIKMIKKLNYGGKELRYYAGSPLIAAELLRPQDRALLTELHPSDYPILRNNFSDDKNVTVKCDNGFQQVKATLPPKERRGLVLIDPPYELKEDYDLVVRAIEEGYKRFATGSYAIWYPVVLRQQTKRIFKGLEATGIRKILKIELAVRPDSDQRGMTASGMVVINPPWTLETQMKEILPYLTKTLVPEGTGSWAVEWITPE*	mmseqs_cdd	nonviral_gene	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_CDS_0026	persistent	direct	high	845	0.999	GCA_003494195.1_00043
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	105876	107282	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	1	1407	GCA_003494195_1_3_95	GCA_003494195_1_3_95	-	339593	.	PDB:3BGW_F	DNAB-Like-Replicative-Helicase	MASQPQIKSSDKKTAQISIPPHSLEAEQAVLGGIMLSNQHWDGIAERVIADDFYTFQHRLIFTEMEHLMRNQSPIDLITLDQALRSRGVIDEVGGFAYLAELSNNTPNAINILAYADIVREKAILRELISVGNRIAENSYSPKGQDIKLILDEAEREVFAIAEKRTTSSEGPQNVINVLESTIEKIDILSKLENHSGVTGITTGFTDLDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCENAAMASEKPVLVFSLEMPAEQIMMRMIASLARVDQTKIRTGQNLDEIEWNKIASVVGMFKQKNNLFIDDSSGLTPTDVRSRARRVYRENGGLSMIMVDYLQLMRAPAFSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRTLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSEDKGVAEIIIGKQRNGPIGRVRLKFNGQFSRFDNLAEQREYHDDY*	rep_hall_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0001	persistent	direct	high	1406	0.999	GCA_003494195.1_01010
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	107424	108860	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	1549	2985	GCA_003494195_1_3_96	GCA_003494195_1_3_96	-	339593	.	PRK05826	pyruvate kinase; Provisional	MSRRLRRTKIVCTMGPSTDRDNNLEKIIAAGANVVRMNFSHGTPDDHIERAERVRSIAKKLGKTVAILGDLQGPKIRVSTFKDGKIFLSVGDKFILDAELPKGEGTQESVGLDYKTLPQDVVPGDILLLDDGRVQLKVLSTDGAKVFTEVTVGGPLSNNKGINKLGGGLSAEALTEKDKADIITAARIGVDFLAVSFPRSSADLNYARELAQQAGLNAKIVAKVERAETVANDEAMDDIILASDVIMVARGDLGVEIGDPELVGVQKKLIRRSRQLNRAVITATQMMESMISNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMAGVCLGAEKMPSINVSRHRMDKEFETIEESVAMSAMYAANHMKGVTAIVTLTSTGRTPLLMSRISSGLPIFALSRNQETLNLCALYRGVTPVYHGEDSRTETSAKVALQSLKEKGYLSTGDLVLVTHGGQGATQTNVCRTLIVE*	mmseqs_cdd	nonviral_gene	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0002	persistent	direct	high	1436	0.999	GCA_003494195.1_01011
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	109406	110653	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	3531	4778	GCA_003494195_1_3_97	GCA_003494195_1_3_97	+	339593	.	PDB:1Z19_B	Integrase	MAVLVKPLSITEINNAKPKEKDYSLSDGQGLFLLVKMNGSKIWRFQYYKPISKKRTLISLGVYPEISLKDAREIRDLYRSLLAKNTDPQDYRLQQEQKAIQERQFTLTEMGKEWLYLKKNEVDTGRLKEVTFIDIGKRLERHLFKVLGHYSISEISAPLAIEKLKPLERAGKLDTLHRIIGYLNQIMIYSVNRGVINYNATADIGRVFIRPIAENNPTIRPEQLPKLFEDLQNSTLEIETRCALELLLLTAGRAGAITQLEWENVDFENSLLNIPKEKMKGRQGKVQDFILPLSKQAVTILRLLQKLNRCNSKFVFPSKKNPRQPISKETPNKALGRIGYRNILTAHGLRSVFSTAMNEAEFNSEIIEVCLAHFEYSSVRGTYNKAKYMPQRIEYMQWWGNFVEEASDGKALMGC*	common_virus_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0003	cloud	direct	high	1247	0.999	GCA_003494195.1_01014
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	110650	110850	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	4775	4975	GCA_003494195_1_3_98	GCA_003494195_1_3_98	-	339593	.	PFAM:PF10013.8	excisionase-and-transcriptional-regulator	MESTTRKLHNLKTVSSLLDMSAPTIYRRIKNDPNFPKPHLVGGNNFWTDAQINDYIERIESGCYSS*	phrogs_hmm	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0004	cloud	direct	high	200	0.995	GCA_003494195.1_01015
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	110895	111113	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	5020	5238	GCA_003494195_1_3_99	GCA_003494195_1_3_99	-	339593	.	COG3311	Predicted DNA-binding transcriptional regulator AlpA [Transcription, Mobilome: prophages, transposons]. 	MKNENLELQNENLQQKLISGADVCRIVGFGRTKLNELVKAKKFPQPIHFSQNFFRWDLEEVNQWIEEQKAAR*	mmseqs_cdd	nonviral_gene	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0005	shell	direct	high	218	0.995	GCA_003494195.1_01016
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	111139	111423	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	5264	5548	GCA_003494195_1_3_100	GCA_003494195_1_3_100	-	339593	.	.	hypothetical protein	MRKKYICKELIDYVTLPDMYYHKKSRLIIRVGSGLILDWFDESSFCKRIKESEPFFRDELPNGISDEECNIAYNAITKSLPEVKLLLGYKLRAE*	.	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0006	cloud	direct	high	284	0.996	GCA_003494195.1_01017
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	111435	112259	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	5560	6384	GCA_003494195_1_3_101	GCA_003494195_1_3_101	-	339593	.	PDB:4U7P_B	Adenine-specific-DNA-methyltransferase	MIVWALFDSGNGCYTQGAELFNQSVGQSVSRSVGQSVSRSVKIYPIGMDIECKNNHFINLNLADYGRMFGDNKLFDELDKLPKPDLIIASPPCESWSVASAMWGGNASWKQETGAVNRELSKFTVRGRADYDLPHVQFKYDRSFLNRINGELCIYNTIEIIKRYNPKVYVIENPASSKIWHYVNDILNFQIPFDNLAHYNLYNYPLRKPTRFKSNINLGLRNNHKSKPQQQWEDFSKSYNERSNIPLELIVDIYKAVNQYLTNPIGVPSERLLF*	common_virus_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0007	cloud	direct	high	824	0.999	GCA_003494195.1_01018
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	112336	112581	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	6461	6706	GCA_003494195_1_3_102	GCA_003494195_1_3_102	-	339593	.	.	hypothetical protein	MRLLKRIAENILREDLRLLGKCVDKSFEQHDLELRKLGDLIKSLKAENDQLKLENTKLETELRAVKQERIFSKRKKKSKRK*	.	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0008	cloud	direct	high	245	0.996	GCA_003494195.1_01019
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	112578	113474	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	6703	7599	GCA_003494195_1_3_103	GCA_003494195_1_3_103	-	339593	.	PRK00321	recombination associated protein; Reviewed	MYWFRNAIVYQLTKQIDFESIEKQLKECEFTPCGSADVSHFGWSAPLATSENLAHQANGKILLVAKREEKILPVEVVNRELNKRITALEEKEQRKLKKVERSSLKDDVIATMLPQAFSRIKTTALYIDTLKQLIFVDAASSKTAEDALALLRKSLGSLPVVPLAFNCAPCEVMTKWITDTAPDWLILREEVEIREKEDLGVIHCKQKAVEDDEIIELVQNGLVSKLALEWEDNLKFVLVEDGTLKRLKFDDNITEKNDDIVKEDAAARFDADFVLMVNVLGKAVDSLIKEFGGIRDRL*	mmseqs_cdd	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0009	cloud	direct	high	896	0.999	GCA_003494195.1_01020
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	113551	114438	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	7676	8563	GCA_003494195_1_3_104	GCA_003494195_1_3_104	-	339593	.	.	hypothetical protein	MTEENKEIIAYKGFNQDWTCRGFQYEIGETYEHKGDVKACESGFHACEYPLDVLSYYSPAISKFAVVKMSGETSKDSDDTKIASAKITIETEINLPEMVKKAVEWIKDKVDWDKAKESNTGYRSAATNTGNRSAATNTGDWSAATNTGDRSVATNTGNGSVATNTGYQSAATNTGSWSVATNTGYQSVATNTGNGSVATNTGYQSVATNTGNGSVATNTGYQSVAEVSGKQSIAVALGWKSKAKASINGAIVCVYRNDDGELIHIKASKVGENNIKADTWYTLDGFGEFVEVKDD*	.	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0010	cloud	direct	high	887	0.999	GCA_003494195.1_01021
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	114501	114941	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	8626	9066	GCA_003494195_1_3_105	GCA_003494195_1_3_105	-	339593	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MAGINKVIIVGHLGNAPEMRTMPNGEQVANISVATSESWTDKNSGEKKTQTEWHRIVFYRRQAEICGQYLQKGSQVYIEGRLRTRKWQDNNGQDRYTTEIQGDVLQMLGGRQDEPKSQSKSQSKPKKPDPLSAAAEQDGFNDDIPF*	common_virus_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0011	shell	direct	high	440	0.998	GCA_003494195.1_01022
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	114950	115093	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	9075	9218	GCA_003494195_1_3_106	GCA_003494195_1_3_106	-	339593	.	6V7U_A	Quorum sensing anti-activator protein, Aqs1	MEEELKGLKEAYLFYRKVLNDKDAIACGCLKDAEEWLLRELDKLFKD*	hhsuite_tools	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0012	cloud	direct	high	143	0.993	GCA_003494195.1_01023
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	115093	115743	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	9218	9868	GCA_003494195_1_3_107	GCA_003494195_1_3_107	-	339593	.	PDB:3SZ4_A	Exonuclease	MEMYKLKARCSGLADLMAKPKNGNGISATTKSAVRKIVKFDLFGYQDFEGNKYTEKGIALEEQAIKLSGRKRGLALKKNTERRENDWITGECDIYVPSRKLIIDTKCPWDIGSHPFFADEAEEKAKKAGYDIQMQGYMWLWDCNEAQIDFVLLPTPYDQLSSYDDPNRYIDLVDQIPQEKRITTVTIKRDDKIIEKIKERVEIAQEYYQQLIQEMS*	common_virus_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0013	cloud	direct	high	650	0.998	GCA_003494195.1_01024
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	115718	116668	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	9843	10793	GCA_003494195_1_3_108	GCA_003494195_1_3_108	-	339593	.	PFAM:PF03837.13	RecT-protein	MTNQVQHQQNKQPPALKTFFKSANIQNKIKELVGKNAATFATSVMQIANSNAMLKTADPMSIFNAACMAATLNLPLQNGLGFAYIVPFRNNKEKKTEAQFQIGYKGFIQLAQRSGQFKRLVALPVYKKQLIKKDFINGFEFDWEKEPEEGELPIGYYAYFKLVNDFSAELYMTHEEINAHAKKYSQTYRTYLDKKAKGQWTQSVWAENFEAMALKTVTKLLLSKQAPLSVEMQQAVLADQAVVKDVENQEFNYTDNIQEAEFLAVVDETTFEQCKQSIANGETTLQELCDSGAYEFSQEQIAELEAIENGNVQAES*	common_virus_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0014	cloud	direct	high	950	0.999	GCA_003494195.1_01025
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	116680	117087	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	10805	11212	GCA_003494195_1_3_109	GCA_003494195_1_3_109	-	339593	.	.	hypothetical protein	MLVDSQDLVTKNTVKIALSFAKNIILDCNHCPQVRSQAVQSSDDYYYQLDAAHQREVDWQAGYEIALDEVATEIDNDLKQGDQTHYHELTEMLCDNDNFWLAIGSGASYEPYRQEAIKKIAERELHDRMNDYDPD*	.	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0015	cloud	direct	moderate	294	0.721	GCA_003494195.1_01026
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	117108	117374	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	11233	11499	GCA_003494195_1_3_110	GCA_003494195_1_3_110	-	339593	.	.	hypothetical protein	MKKKVAKVEIEEINDKVIARLFVNDQLKHSVFPQCSRSNAIMLINRAIDRFNAMNGTYFKHYKDSKNECGLSYLRQSSPNRRARTSLY*	.	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0016	cloud	direct	high	266	0.996	GCA_003494195.1_01027
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	117343	117666	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	11468	11791	GCA_003494195_1_3_111	GCA_003494195_1_3_111	-	339593	.	.	hypothetical protein	MKKHQLKNSFTYFMKGTEKALKIAVCILGATMVSAVISIDVKANQTDLDNNVLSQREEQAKAKVQWREENGDWQPNLTAGVEQEALAYVFKKQKELDHEKESGKSRD*	.	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0017	cloud	direct	high	323	0.997	GCA_003494195.1_01028
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	119123	119791	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	13248	13916	GCA_003494195_1_3_112	GCA_003494195_1_3_112	-	339593	.	PDB:2FJR_A	Repressor-protein-CI	MKKTWIDFVREGMAKRKLSQEELAAAVDKTQGGVGHWLNGRRQPNIDDIAKMLGVVGVDQVVLNSDGSLEKLSDSSENVLMPKARLVPVVGEILMEEDGTLTLEECDIGYLKAETIDPKAKAYRIKGSNAEPRIRNGEFIVIEPSFTAQDGDDVLVLYKNGKYSVKTLDHIRDNEYRFSSINLRERPISVPESEIEYAHPITGIYNRVRFVSKAQVESEKQE*	common_virus_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0018	cloud	direct	high	668	0.999	GCA_003494195.1_01029
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	119917	120123	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	14042	14248	GCA_003494195_1_3_113	GCA_003494195_1_3_113	+	339593	.	PFAM:PF13744.5	transcriptional-repressor	METKIKEFRNKANLTQQEFADKLSLTQSGLGHYESGRRKVSLAMARRIVRALNACKVKCSIDTVFPEK*	phrogs_hmm	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0019	cloud	direct	high	206	0.995	GCA_003494195.1_01030
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	120226	120903	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	14351	15028	GCA_003494195_1_3_114	GCA_003494195_1_3_114	+	339593	.	PFAM:PF03374.13	KilA-protein	MNKLLTITKENASTLTMGSREIANLCGKDHRHVVRDIEVMFEQLGINSKEYVQIWTHPQNGQSYREFMLPKNLTFTLVAGYNVILRKRIIDRWLELENQQKPTALIPQSFSEALMLAAQLQAEKERNAPKVAFVDHYVEVGTSKSFRETAKILKMPERALVNRLLEDKYLYRQSGVLLPYQSAHTKDLFTVKTGTAEHGHNYTQTRVTSKGIEFIASRYASELML*	common_virus_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0020	cloud	direct	high	677	0.999	GCA_003494195.1_01031
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	120900	121646	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	15025	15771	GCA_003494195_1_3_115	GCA_003494195_1_3_115	+	339593	.	pfam13730	Helix-turn-helix domain. 	MSMRLMVLAMNCKVGNPARKLVLLKLADNANDDGICFPSYQYIADKCEMSKRSAISHIDDLIKMGFVTKKARKNKDGSSANLYLLHLEQGSEKSALGGENISLGSEKSALGGSEKSAPITSHSLEPVNEPKKNTKKSEDEILLEQFGISGQLAKDFITHRKAKKAPITETVMNGFLREANKAGLSVAESVAISIERNWQGFKATWYLKDKELQSIKQPQSANTFADDGTWAIGRQLNIDPDLIPEELR*	mmseqs_cdd	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0021	cloud	direct	high	746	0.999	GCA_003494195.1_01032
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	121643	122278	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	15768	16403	GCA_003494195_1_3_116	GCA_003494195_1_3_116	+	339593	.	PFAM:PF06992.10	Replication-protein-P	MTNVVPMQAVKSAVKKSDIPNNAVRLIDRMFIRLKSIFPAWKQAFASEVEYNETKQVWLEELFKAGVVEPMKLKHGLDLAAKSTSPFFPSVGQFIAWCEFESYHELGLPTLEELEQRLKKYFGYAKEPHNFNFRSPAEYWLLSELYRNYSKKKWEDCQKAMPRILAQAVVKVRSGDEFEPIPIAIEEKTKVIDRQVAIQGVARLKTIMGLN*	rep_hall_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0022	cloud	direct	high	635	0.998	GCA_003494195.1_01033
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	122280	122783	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	16405	16908	GCA_003494195_1_3_117	GCA_003494195_1_3_117	+	339593	.	PFAM:PF05869.10	Adenine-specific-DNA-methyltransferase	MSEFNKDCYRTPSYVFNALNRKYRFDVDACASADNALCEKYFTENLDITKTEIQELVSEGSRVWMNPPYSNPTPFVQTAIDLMIHRDCVVVMLLPADKSTKWFSLALSAATEICDVIGGRINFFHPVTCEEVKGNNKGSMIVVFDPNSQSQIQTGVTLDFLKSRGAQ*	common_virus_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0023	cloud	direct	high	503	0.998	GCA_003494195.1_01034
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	122780	123013	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	16905	17138	GCA_003494195_1_3_118	GCA_003494195_1_3_118	+	339593	.	.	hypothetical protein	MISENFKCPKCGAPVVDWYFPNGECVMVGEEDSDRFQCCGHLIEPICYPNVSKDNPMNRTKSCGYFGLEDLGVEYKE*	.	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0024	cloud	direct	high	233	0.996	GCA_003494195.1_01035
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	123010	123933	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	17135	18058	GCA_003494195_1_3_119	GCA_003494195_1_3_119	+	339593	.	PFAM:PF02384.15	DNA-methyltransferase	MSFEEHNNRKKANKFAEYITGESLRRYLAGKVEKYLGKNLSVFDGAAGSGQLEQFIQPSKFIAVEIQAESCAALANNYPDAEIHNTSFFLYQSEPKSDCVVMNPPFSLKFKELAEEEKTAIQADFPWKKSGVLDDVFMLKGLANAHRFGFFIMFPGIAYRNTELTLREVIGNQLVELNLIQNAFEDTPISVLFLVVDKTKSNNKTYRELYDCATNKIINADEWLINSDKWDTVSPPEPPKEKIDPMKLELMSQAQLKERVRSQIQFSGMVFDLEGWPREEFEKFCDEVCALIQEEKKSNRFLFGWGE*	phrogs_hmm	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0025	cloud	direct	high	923	0.999	GCA_003494195.1_01036
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	123930	124145	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	18055	18270	GCA_003494195_1_3_120	GCA_003494195_1_3_120	+	339593	.	.	hypothetical protein	MMKDFYIHRSAYHDGSTKGFRHGIKHKRHDCFRGDVRVLQCINGEMVQISRVRKRFKTYEDAYAWARGLEC*	.	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0026	cloud	direct	moderate	212	0.981	GCA_003494195.1_01037
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	124188	124604	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	18313	18729	GCA_003494195_1_3_121	GCA_003494195_1_3_121	+	339593	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPTDDKKPLVVKIQPITRNLEQNAKFHAMCQDVANQAEFMGRKLTMEQWKVLFISGHAIATNQKADVVPGLEGEFVNIRESSAQMSVSRMASLIEYVTSWGVQNGVRFNDRWGF*	mmseqs_cdd	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0027	cloud	direct	high	416	0.998	GCA_003494195.1_01038
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	124694	125242	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	18819	19367	GCA_003494195_1_3_122	GCA_003494195_1_3_122	+	339593	.	PFAM:PF05766.11	NinG-recombination-protein	MAKEYKCKVCGKPFVKTFSSTQKVCSPECAIKLARDNAKKTQERAEKKKQRERKAKLKSRSEWLKEAQSVFNKFIRLRDKNEPCISCGRYHQGQYHAGHYRSVGACPELRFCELNVHKQCAPCNDHKSGNIIEYRINLVNKIGADKVAWLERQDHDPKKYTIEDCKAIIKYYKAKIKELEGE*	common_virus_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0028	shell	direct	high	548	0.998	GCA_003494195.1_01040
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	125244	125612	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	19369	19737	GCA_003494195_1_3_123	GCA_003494195_1_3_123	+	339593	.	PFAM:PF06530.11	anti-termination-protein-Q-like	MSYSVERVLEKWGNCWGRDRIGTEYPSTTISIPVLPTVRKAHIRFLTDDECLKIEEQIMNLHEDSLLQYQILMALYVQQANERDICTALHISPAHMYRERAKGVRFLKGAFTGAKIKFMFLG*	phrogs_hmm	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0029	cloud	direct	high	368	0.997	GCA_003494195.1_01041
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	125734	126069	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	19859	20194	GCA_003494195_1_3_124	GCA_003494195_1_3_124	+	339593	.	.	hypothetical protein	MKKFLLPLLFLPIAFSVQAKQYTPEQLNSMVNSGNFPEQGPSSSESKYMDFEQCVLTAKTVSDSIKDYYPTSVIADTAIAYIVKFWTNDGVTLITCSKSDNKMVMTQSSYK*	.	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0030	cloud	direct	high	335	0.997	GCA_003494195.1_01042
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	126371	126622	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	20496	20747	GCA_003494195_1_3_125	GCA_003494195_1_3_125	+	339593	.	PFAM:PF16082.4	holin	MFKDPGNQAYVWSGFSSVLAWLGDQNNLMLLSLAIGILTALVNVYSKCVEWRMMKRENERKEEIHKVRMERLKRGLPDEISED*	phrogs_hmm	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0031	cloud	direct	high	251	0.996	GCA_003494195.1_01044
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	126603	127157	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	20728	21282	GCA_003494195_1_3_126	GCA_003494195_1_3_126	+	339593	.	CDD:cd16901	P1-lysozyme	MKLARTRTTLGATGFVCAVSSIITLMYAQFGEELILSPKGAEIIGNAEGCRRDPYKCPSDVLTVGIGSTAYSGQPVDPKHRYTDLEIAERWKNDIQVAEKCVLNYGNGRALPQSVFDSAVSITFNAGCGAVRNSTLFKQLRSGNYYQACHEYPKWVYAGGKILPGLVSRREKEKALCLADLKQP*	common_virus_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0032	cloud	direct	high	554	0.998	GCA_003494195.1_01045
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	127130	127465	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	21255	21590	GCA_003494195_1_3_127	GCA_003494195_1_3_127	+	339593	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MFSRFETALKLTTLCLILGLCGWTWYQSQKISSLKAENQAQAQTIQQQSESIIQLKADIAENQRITLELSKAENASREEQNEVLNSIPKAEKQSSVFNTAAPNSLINFLRK*	mmseqs_cdd	nonviral_gene	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0033	cloud	direct	high	335	0.997	GCA_003494195.1_01046
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	127413	127652	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	21538	21777	GCA_003494195_1_3_128	GCA_003494195_1_3_128	+	339593	.	.	hypothetical protein	MYLIPLLLTVLLTSCASKPQVVHCPVLPVAYIAHLDKTPFNGVSYGDVAQYAVILKRERDVCLARVDKIREWHTEKLSK*	.	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0034	cloud	ambiguous	low	54	0.225	GCA_003494195.1_01046
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	127696	128046	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	21821	22171	GCA_003494195_1_3_129	GCA_003494195_1_3_129	+	339593	.	PDB:5H0M_A	HNH-endonuclease	MPARIPKACRKQGCKNTTINSNGYCDEHQGCGWQRHQKGKTSSQRGYGAKWRKIRAAVLVRDNHLCQECLKQGRFVTATTVDHIIPKAHGGSDNVTNLQSLCDSCHKFKTARERLK*	common_virus_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0035	.	unmatched_CDS	none	0	0	.
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	128174	128656	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	22299	22781	GCA_003494195_1_3_130	GCA_003494195_1_3_130	+	339593	.	PFAM:PF05119.11	Small-Terminase	MTGKSLVSGRGRKPKPTAVKTRQGNPGKRKLNENEPKFSEFDEHSPPPDDLDENGKTMWAFVLRELIPQKVLLKTDLQTVANYCIAYQNRKKANQDIERYGSVIESDTGIKRNPAYTTLKEAMADMAKFGSLLGLDPSSRTRLVGNADNEIKNPFAELMQ*	hallmark_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0036	cloud	direct	high	482	0.998	GCA_003494195.1_01047
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	128653	130356	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	22778	24481	GCA_003494195_1_3_131	GCA_003494195_1_3_131	+	339593	.	PFAM:PF03354.14	Large-Terminase	MTDNVKKAIKYAKDVIAGKIPACRFIVKTCQQFIDDLENQSAVKFPYYFDEVKAEKACKFIQYLPHTKGEWASKRQNITLEPWQLFIMANTFGWLRKSDNLRRYREVYVEVPRKNGKSAISAGVGLYMFCMDNEFGAEVYSGATTEKQAWEVFRPARLMCKKTDLLCSTFGIEVNASNLNRPADGSRFEPLIGSPGDGASPSCAIVDEYHEHKNDELYTTMLTGMGARKQPLMFIITTAGYNIEGPCYDKRREVIEKLSGAIPNDELLGIIYTIDEDDDWTDESVLRKANPNFDVSVYGDYLISQQNKAINNARLTNTFKTKHLNVWVSAKESYFNMVSWENCKDETLSLEDFQGDDVTLGLDMARKLDMNSLVKVFARIIDGKRHYYCIAPEFFVPEDTVYNTDTALKRVVDKYQKWVNSGHLTSTDGAEVDYREIEEVIKDTNQEHRVACVAIDPHGAIAISHNLADEGLNPITITQNYTNLSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTVPGNDDVVRPIKEIPENKIDGAVALMMAIGRIMLSVDDNFFPDEVLEL*	hallmark_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0037	cloud	direct	high	1703	0.999	GCA_003494195.1_01048
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	130353	130502	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	24478	24627	GCA_003494195_1_3_132	GCA_003494195_1_3_132	+	339593	.	.	hypothetical protein	MRNVILDLLGLTGFVMLCSGTYLKYGLDVSLMCGGTLLLLLVISVSRGK*	.	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0038	cloud	direct	high	149	0.993	GCA_003494195.1_01049
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	130502	131716	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	24627	25841	GCA_003494195_1_3_133	GCA_003494195_1_3_133	+	339593	.	PDB:8CEZ_K	Portal-Protein	MIFDNLFGTRSLENPSVPLSSEAAYDELFGAQPTKVVSPDLAMKLSAVYACVYVLSSSLAQLPLHVKRKNGDKVETAKDHPAYYLLHDSPNFWQTSYKMREYAQSSVLLYGNAYIHIVRNHNGAVQSLESLEPWKVQLLKNGGRYVYAYYDDDKTLSITPDDMIHIKSLGPSIKTGKSVIQTHAETIGLGLDARKFASGFFGGNARPAGILSVKTPLNSNAWETFKKMWQTAQDKLRSEENKTILLPAELDYKALTVSPVDTELLSMMKLNRSEVAGIFNVPAHMINDLEKATFSNISEQTIQFIRYSVMPWVVNWEQELNRKIFTDAERKAGYFVKFNLAGIMRGTAGERATFYHAAITDGWMSRNEARQLEDMNPVDGLDEMLVSVNAAKQANNKQTENTNE*	hallmark_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0039	cloud	direct	high	1214	0.999	GCA_003494195.1_01050
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	131709	132311	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	25834	26436	GCA_003494195_1_3_134	GCA_003494195_1_3_134	+	339593	.	PFAM:PF04586.16	prohead-serine-protease	MSDVEKRSYAGEVRAENRDNEPTHIIGYGSVFNSKSEVMWGFREIIMPGAFDDVLEDDVRGLFNHDPNFILGRSKAGTLSLSVDETGLKYDIIAPDNPTIRDLVIAPLKRGDITQSSFAFKIARNGDDWYENDDGVIIREIHKISRLYDVSPVTYPAYQEASSTARSLEAWKEARDSGTIAKAVSQKAARERFLSLISAK*	hallmark_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0040	cloud	direct	high	602	0.998	GCA_003494195.1_01051
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	132379	133584	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	26504	27709	GCA_003494195_1_3_135	GCA_003494195_1_3_135	+	339593	.	PDB:6TSU_J4	Major-Capsid-Protein	MAKLHELQEKRRNIAAQMRQLNDEIGEKTWTEEQRTKWDSMKSELGGIESQIEREESLRSTDALFVEEQRQIETESKPAIDVEVKRSQAFNSFLRRGLGELNQEERQVMAELRAQAAGTDNKGGYTVPKEMQARIVEQMKAYGGIASVAQILNTADGRIITWATANGTAEEGELIGENVAATELDTEFGTAEIGAKKLSSKIIRVSNELLQDSGVDIEEYLSRRIAERIGRAEAKYLIQGTGVGSPAQPKGLQTAVTGVTQAAAAAVTWQDFNALIHSVDPAYRNVGNTRIAFNDNTLKTLKEMVDGQKRPLWLPDVAGVAPATILGHQYVIDQGIEDIGAGKKFAYFGDFNRFIIRRVSGMTLRRLVERYAEFDQVGFLAFHRFDCVLEDASAIKALTGK*	hallmark_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0041	cloud	direct	high	1205	0.999	GCA_003494195.1_01052
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	133632	133958	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	27757	28083	GCA_003494195_1_3_136	GCA_003494195_1_3_136	+	339593	.	CDD:cd08054	Head-Tail-Connector-Protein	MQITLDEIKLQCRIDSDDEDNLLSVYLVAAKAIVENHTNRVLFEKLPEDESKPANAQEITGDLKIAILMLVAYLYENRGGWNEVHGGANIDLPPAVKAIIERYRFIKV*	hallmark_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0042	cloud	direct	high	326	0.997	GCA_003494195.1_01053
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	133970	134293	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	28095	28418	GCA_003494195_1_3_137	GCA_003494195_1_3_137	+	339593	.	PDB:2KZ4_A	Head-tail-adaptor	MNIGKLRHRITLLKQVNDVNDYGASVQTWRTVATVWAEVRPLSGREYFSAQQVQSEVTTQIWLRYIDGIKPSMKVKFANREFEILSVLNTQERDVSLQLMCKETVNG*	hallmark_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0043	cloud	direct	high	323	0.997	GCA_003494195.1_01054
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	134286	134765	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	28411	28890	GCA_003494195_1_3_138	GCA_003494195_1_3_138	+	339593	.	PFAM:PF04883.11	tail-component	MANLNVKVTGLKELKHAMDSLDRKVRKNISVKAMRKGGAIIRDKARANAPVLEHSVPHRNRGTLRKAISASTKIAKNGSVNTRIFVRKLKISKITAFKEHGKGSSGNPNDPYYWRFVEFGTSKMSARPFLRPAFEQSKEQAAQTIITTLRDTIISEAGK*	hallmark_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0044	cloud	direct	high	479	0.998	GCA_003494195.1_01055
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	134767	135111	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	28892	29236	GCA_003494195_1_3_139	GCA_003494195_1_3_139	+	339593	.	PFAM:PF05657.10	tail-component	MIQNKLFNALAPLVPGRCFYGLIPETNKSFPVIVYQFPTITPNPALEDGDLDDYQVQIDVYSPNPDDIFRLRKPIFNALSAEFEFAERLNDFSDYEPDTKLHRRVISYQIAYGE*	hallmark_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0045	cloud	direct	high	344	0.997	GCA_003494195.1_01056
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	135115	135771	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	29240	29896	GCA_003494195_1_3_140	GCA_003494195_1_3_140	+	339593	.	PFAM:PF06199.10	major-tail-protein	MATKTTPFQGTKFYLGIGLNEEKTITAATVKPNATITSTGHGAKAGDFAKVSGLGSLDGYYPIKSVTENEITFADEVNWRDQDEPTDFSKAKVSLVKWSSNFCAIKQIEGDGDTLGEEDITTMCSEGTETEAGEIEYGSIKLTFFYAPATTMQADLRKKFYDKETFPWMMKLRNEQGSLYGTGFIQTSPNFSGEVKGKFESGVTIKKAKRDYHLPVSA*	phrogs_hmm	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0046	cloud	direct	high	656	0.998	GCA_003494195.1_01057
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	135825	136232	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	29950	30357	GCA_003494195_1_3_141	GCA_003494195_1_3_141	+	339593	.	PFAM:PF16462.4	tail-assembly-chaperone	MNLREKLLANHPKITPIIINGVTFYIREITVGEMNRVLYGQQQELVRIAESQGIELNFNDEKHLTEQLAKIYDPNRLTRTLAMRLCDQDGKNLFDVDNPDDLAALSKLDKVVFEQLTQAIVEDEPKNSLAEESSK*	phrogs_hmm	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0047	cloud	direct	high	407	0.998	GCA_003494195.1_01058
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	136277	136501	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	30402	30626	GCA_003494195_1_3_142	GCA_003494195_1_3_142	+	339593	.	pfam13227	Protein of unknown function (DUF4035). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 67 and 93 amino acids in length.	MPEHHLQEYEMFYQEQPFGLWREDYRTAQVSHLLAMINRDPKSKAPELSDFMPFYQEKMDDEDDDGVADYLANR*	mmseqs_cdd	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0048	cloud	direct	high	224	0.996	GCA_003494195.1_01059
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	136575	136811	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	30700	30936	GCA_003494195_1_3_143	GCA_003494195_1_3_143	+	339593	.	.	hypothetical protein	MIEFVKFFAKLSFITFIVIGYLLLLSIIDFSYILSFIGVYVAIFATCLVVAIIKENNRINKLRIAEQDKNRVKYVIIN*	.	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0049	cloud	direct	high	236	0.996	GCA_003494195.1_01060
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	136865	140236	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	30990	34361	GCA_003494195_1_3_144	GCA_003494195_1_3_144	+	339593	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MSSLGSLNILLSLDSIQFNQALDKSSYQTQKFAKQFELNFTKAQAKAKQFSERTTQYLNNIEKAANTINKTTRNTFWAGIVSSGGSYLSSGISDVMKYADSYTELQNRIRLVTNSQTAMVAATESVFDISLKTNQAVGATAQIYQRFAQNADRLNLSQLQVSELTETVAKSVAISGASAGAAEAALMQFGQALGSAELRGDELNSVIEQTPGLADAIAKGLGVTTGELKNLAKAGQLDIHTVIQALVKARDTVDNDFNKRVKTLSMSFTNLETSITKFSGEANSALGVTQKLATGVDFVSDHLQELIIGLGSLTAALAIGHLSKYGLELLKTGYASAKNKLAYYAEAKAIATKATAMRTAAQVEMASLNAQFQLAQSEQTRFALRERMKVQSAQIIALAQAEATAKRNLATATNIAAMAAKGLQSVMALLGGPAGVIGIAATSLIFFSSQAAQARQWALDTTTANQGLAESYNELSEAALSLKVEDQLENIKKYYKEIEKVKATIATKNVSANFDGFQVDNGISNKELEHLQNEIKSIEENAGLAEKALVKMLAPLAENMLRSGKSLDDVRQKFKLLGVDAVTANNIIATLPKSFSGAANGAKNATDKTLDLKDAIDKLNGKSTTLAQKLEVAKLKQQGQAKSAYVLAGLYELLGKEGAEYNEVLIGIATGTITAANAADKAVGLSVETLKKILDGKAQLEQDFTKENQINKIETGLKENGRHSKGSKTDYVKQYTDQVSEMEKRLSELRANAQDIALFGQTSQYQEVNKLTQDIAANAEKYAHFGADGLAKLKDMAAQIDAAQQEVSINQFTFDNSEKLRAMEFELTLLGKTRQEQELMQYNHQLDLEAARLKIGMSQENIAKLDEEIAKLKERRGIIQQQTEESRSSAILGFQQGMKTIEEQVSDVAGNISNITVNAFNGMSDALTDFIMTGKTDFNSLAKSIIKDIVQMTTKMIIFASLKAAFGGTSFGKFMGFSGGGLVPELKYTGGLVGFDEGGFTGIGGKYTPAGIVHKGEYVITKEATARLGRGFLDHLNYGSVRRGFANGGGVGVPRLPTMAYQPKSSGNIAVKVINNGEPMDATVSQQSKNGQLEITVELVRKIAQQESGKMLQENMRYGGMLG*	hallmark_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0050	cloud	direct	high	3371	1.0	GCA_003494195.1_01061
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	140233	140562	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	34358	34687	GCA_003494195_1_3_145	GCA_003494195_1_3_145	+	339593	.	PFAM:PF05939.12	minor-tail-protein	MMETFKWCVRPNYSVDNEPNISEVVFGDGYTQRRLNGINALLKTYSVVIKVRNKSASDVLSFFERHQGIKPFYFIDPLTKQLKKVICKKWPAKVDQSYTEITCDFKEEP*	hallmark_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0051	cloud	direct	high	329	0.997	GCA_003494195.1_01062
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	140562	141275	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	34687	35400	GCA_003494195_1_3_146	GCA_003494195_1_3_146	+	339593	.	PFAM:PF05100.11	minor-tail-protein-	MPALISNAFKLDLAKLEQNALIELFEVDLRGLKDNDGMNGELYRFYAGTNEKSQSIVWQSKTFEPFAVKADGFEMSGNGPSNRPTLTLGNINGFITALCNRFDQCLGGIVRRRLVYMHYLDAVNFTNGNKKADPTQEALSYFVIEQLSSLNRDIAQFTLALPSETDNALIGARMITTTCSWLYRSVECGYTGRAVADEKDQPTADPKKDKCSGLLTGCVLRNNTHNYGGFVSVDKLG*	hallmark_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0052	cloud	direct	high	713	0.999	GCA_003494195.1_01063
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	141279	142013	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	35404	36138	GCA_003494195_1_3_147	GCA_003494195_1_3_147	+	339593	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MDGKLHNEIIRYSKSKEPQESCGFVVLVGSEKVFIPCENVAEDKENHFEIAPEDYIAASEKGEVLALVHSHPQGEPKLSQVDLQTQLYSQLDFWLVCDEQIHIFPKIPFLIGRDFKHGEMDCYTLFRDFYRLSGCNLPDFERDDYWWEDGFNLYLDNMAKHGFEQVKEPQIGDVILINIGADVPNHAAIYVGNQMVLHHAPKRLSKRDLYDGYWLKHTHSIWRYNAWSTLDFTAALNSLDLNLG*	mmseqs_cdd	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0053	cloud	direct	high	734	0.999	GCA_003494195.1_01064
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	141956	142543	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	36081	36668	GCA_003494195_1_3_148	GCA_003494195_1_3_148	+	339593	.	PFAM:PF06805.11	tail-assembly-protein-I	MVNVRFYGSLKQFGSEFRLDCQTTAEIVQALTSQIPKLRQFIQQGLFTVRVGRDYFDNRYLEQGLSHKLKDDATVHFTPVLKGSKRGGLFGVIAGVAIIAGAIALGTLGFGLLSTNAAWIVGSVGASLLLGGVAQMLTKMPEMKMGTEKEKKQSTAFSNLSNMTAQGKAMPLAYGRMRVGSLIISQGVETMDTEI*	hallmark_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0054	cloud	direct	high	587	0.998	GCA_003494195.1_01065
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	142554	146213	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	36679	40338	GCA_003494195_1_3_149	GCA_003494195_1_3_149	+	339593	.	PFAM:PF13550.5	tail-protein	MGKGGGGGGHTPVEAKESGRSKQLVKIVEVISEGEVYGLADGMKSIYFDKTPVQNKDGSYNFKNVQVEGRVGGQVQDLMAGFNTSEKEVGVGALVKKNLPLTRTVTDAKVSRLRLTIGVQSLFKQEDNGDTNGTTVNFIITIGKKTYPVSISGKYSSQYLQHHTFDNLPSVPFIVKVERTTDDSTTQRLQNNTIWSSYTEIIDTEFTYPNTALMGVKFDSEYFSNIPTRTYDLLGLKVKVPSNYDTRTRQYTGMWDGTFKIDWTDNPAWVLYDVVTNKRYGLGGRLGEFGADKWVLYQVAQYCDQLVPDGFGGQEPRFTCNVWLTEQRSAYQVINDICSIFRAMPVWNGQQLTVVMDRPADPVWTYTNANVDESGFSYTFSARKSRHNAIQVEYADKENSYEKAIEYVADDESIRKNGLNVKKITAFGCTSRGQAHRTALWLLQTEKLETKTVTFTVGAEGLMHIPGDIIKVADTHYAGTNIGGRVLAVNGKTVTLDREITLSGNSYLSYINANAKHQNIKIISVNGAEVTLDQPPVGLELYGVWSLTTQQVTSQLFKALSVKEESKGKYTIMALQHEPQKEAIVDNGAKFEPVGTAPLTTPQISNIGVAVNSDGGVSVDSSVTGGNGIVKYDIRIYKGGVLYDVRLGQQSPNLNIGGLENGDYSVLIQVKNENGQLLSEKTQTFTINKPPAPTGVRTTGGLGNITLEWDWVDDATATEIFASETDDIKTAKRLTKVTARMYTHEVGAKQVRYYWLRHVRGVNVGPFNQQSGVKGESAVDIDAELEVLNKKLSQNIVNEVIDTALPARNLEMTKTVTGLNVNKFIGYKQVYNTADGKLYTWNGSKYIENGVDVNGIRINTTQLVGTLQANQIGVNTIGAGALQAGAVRANHLAAGEVTADKLAIGLGGNLFTNPIFANIKDNKVFAWSKTGNSSNYIIDDNSNSDYGLKGRGLATENCLRIINNDTTPNNYISIKQNVRVNAGNYYMVSVYAGSHNAIKAEMIIQYNGIGITKTESTAITGDFSNWDSARVFKKIHIPGNCKSIFIIFKLTSVANNSILLLARPMLEECTQYATQPSAWVNAGVTSIHGGSIVTNSITAQQIAAETITGNEIVGGTIAGKHIASKTINAGHIVSKSITAKELNVESLSAISADLGAITGGSLKIGSLNGNFGTLFEVQSNGGFRLISRDASGGIELSSATRALHVWDGGAEVVRVGKLS*	hallmark_hmm	common_virus	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0055	cloud	direct	high	3659	1.0	GCA_003494195.1_01066
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	146222	146548	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	40347	40673	GCA_003494195_1_3_150	GCA_003494195_1_3_150	+	339593	.	.	hypothetical protein	MYYIDEPVPIDKSFTEKPICAWHIAGRLTIDYINKNTTIELVSWADKQAFLARGESLVTFLTVNDCPRFSVDPSLFALRALTTVEGSPFYRKQVKCDYELDHISQVWR*	.	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0056	cloud	direct	high	326	0.997	GCA_003494195.1_01067
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	146551	146886	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	40676	41011	GCA_003494195_1_3_151	GCA_003494195_1_3_151	+	339593	.	.	hypothetical protein	MSDFGLMTMRNDNVFFHTNNSNTVCLGFIDIRGEGSFDIIKNNIQIPNDKSFWYLPTILQLNSTLSDLEILAIVKDNKIIGFQWGHFSRVIYVNHLESENNEGVRVYYGYY*	.	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0057	cloud	direct	high	335	0.997	GCA_003494195.1_01068
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	146873	148351	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	40998	42476	GCA_003494195_1_3_152	GCA_003494195_1_3_152	+	339593	.	.	hypothetical protein	MATTNGIKINNTILHNNNIFKFVTVIDFYCSEDIMFLPFRITKDNEKELIRRFDYLKSQKERNSHFISQVLYAQILEQIPTKKQPNIWDNKIELIVWIKLDIKKLFPKQLLNFTNTYTNLRIINEERLNFLINALYFYDNFGVKDPSNNYHFVDDLDLKQAGMINPFGSVVHKHYLYFIKPFGNERFYSVEFAQNARKQFSQMVNTKPIVHSFFPAKLNLNGKSIVERAKIDVMRLYIYDTSSSSLSSTENYTNTNSNLSYLPTVNNYDYGAVNYFQPDISYATNIKDYIKSAIKSNSSEIKGDIVTKREITKNKLKLFNSQELTLRIAGAVSLSGRLQWLSKGYKYKDENRYSSLSYSSHVERLNYDKNAYKSDPQVEFLRISNINFDLWKSAMPVQIHTPPAKNRNIYESHDTGYPDGSEYDPPVFFRVKDSHTLDVVIETVDLHSFRLPYHLTTFASHIFFIDVSIIDDMLNNHKNTFIDSVPLHLRIS*	.	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0058	cloud	direct	high	1478	0.999	GCA_003494195.1_01069
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	148375	148995	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	42500	43120	GCA_003494195_1_3_153	GCA_003494195_1_3_153	+	339593	.	PFAM:PF14301.5	tail-protein	MQVFLFDQKLISVINRKEEITDETCLITEQEREKIQETLNTQGHFWRIDKYTVGCSGVKPSENHKWNDEKHDWEIDSDLIQQNLAKKRAELWETIKARRLQATRTGVEVTLPNGQVRHFHTDQVARQEYDGMGLTIVLGTFEPRQWKTIENDWVQFDLDTFKALAQAIKGKVDHDYRNAEVLKAQVDKSDTPENIDLNQGWSQSYV*	phrogs_hmm	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0059	cloud	direct	high	620	0.998	GCA_003494195.1_01070
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	148988	149449	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	43113	43574	GCA_003494195_1_3_154	GCA_003494195_1_3_154	+	339593	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MSKVVIAFYKHKRERNSVKNTLFRFFDDAIKFFTHGPYSHCEIAISNPQPSKTYTCFSASNRDGGVRKKTMELPPERWDLVELEASPEEVMAFFGKTKGLKYDLIGALGVVLRIRDSKTKYFCSEWCAECLGIDKPYRFSPNSLYKHLTNSHG*	phrogs_hmm	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0060	cloud	direct	high	461	0.998	GCA_003494195.1_01071
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	149486	149779	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	43611	43904	GCA_003494195_1_3_155	GCA_003494195_1_3_155	+	339593	.	.	hypothetical protein	MTTFNKILNPMYSVIAAYSKQEDGSINAKYVLGTGTDNDGAVTDFTPIISEYKWIDPTAAKSIFGQPLTQDDIGKTTEEIDLGRIYAYLKEQGQIVI*	.	hypothetical_protein	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0061	cloud	direct	high	293	0.997	GCA_003494195.1_01072
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	150133	150537	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	44258	44662	GCA_003494195_1_3_156	GCA_003494195_1_3_156	-	339593	.	pfam06295	Protein of unknown function (DUF1043). This family consists of several hypothetical bacterial proteins of unknown function.	MENWTNEIWVAIGIAFIVGLFIGYIIVRLTKGSVKHQAKTEAELKTVKTQLDTQKAQIEKHFAESAELFKTLINDYQKLYRHYATSSNNLLGEKDHKGLFTQQLITATDKSQNEQPRDYSEGASGLFKENKEEN*	mmseqs_cdd	nonviral_gene	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0062	persistent	direct	high	404	0.998	GCA_003494195.1_01073
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	150567	150917	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	44692	45042	GCA_003494195_1_3_157	GCA_003494195_1_3_157	-	339593	.	cd06150	This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function.  The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	MTIQRILPSARLSEVSIHNNLAYFAGQVPELTIEQNAYEQTKEVLGLIDKLLAEIGSNKSNILTAQIFLADMQDYAQLNQAWDEWVDHISPPSRATVEAKLADPRWKVEIVIIATC*	mmseqs_cdd	nonviral_gene	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0063	persistent	direct	high	350	0.997	GCA_003494195.1_01074
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	151029	151745	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	45154	45870	GCA_003494195_1_3_158	GCA_003494195_1_3_158	+	339593	.	pfam14256	YwiC-like protein. The YwiC-like protein family includes the B. subtilis YwiC protein, which is functionally uncharacterized. This domain family is found in bacteria, and is approximately 130 amino acids in length. There is a single completely conserved residue G that may be functionally important.	MKLLISNQHGAIVMALVPFIYGMLLANPVWAHVFLLLGWFSLYLMTYPFLNLFKGKNLELYKKWSVIYFAAAVIFAIPALIYNWQVLYFMFAMLPFVAVNIYFTKKKDERNLWNDLAGILIFALAGMGSYYFSDRTFDEKMLWVAIYPTLFFIGTTLYVKSMMRERKNPRYFWASVIFHLLCVLIFVVSQQFILALAFVPGLVRAVYLPTKKLSVMQVGLTEFAITAVFFILLLIATL*	mmseqs_cdd	nonviral_gene	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0064	persistent	direct	high	716	0.999	GCA_003494195.1_01075
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	151746	152288	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	45871	46413	GCA_003494195_1_3_159	GCA_003494195_1_3_159	+	339593	.	COG0790	TPR repeat [Signal transduction mechanisms]. 	MKLKLFFHTVLLSFSLPILAMKTVDITASSKMDDQARMNLAQDFANKQQWISVFDIMYPMALEGNITAQSNLGMLYNLGRGTVRDYEKAYWWFSEAAEKGSVKGLNNLGVMYLRGDYVKQNTEQAIKLFERTARAKDTDAMMMLSNIYRSQNQPEKSLEWLKKAAELGNKEAKQRLSSQP*	mmseqs_cdd	nonviral_gene	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0065	persistent	direct	high	542	0.998	GCA_003494195.1_01076
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	CDS	152303	152710	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	46428	46835	GCA_003494195_1_3_160	GCA_003494195_1_3_160	-	339593	.	cd04784	Helix-Turn-Helix DNA binding domain of the CadR and PbrR transcription regulators. Helix-turn-helix (HTH) CadR and PbrR transcription regulators including Pseudomonas aeruginosa CadR and Ralstonia metallidurans PbrR that regulate expression of the cadmium and lead resistance operons, respectively. These proteins are comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the C-terminal domains have three conserved cysteines which form a putative metal binding site. Some members in this group have a histidine-rich C-terminal extension. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements.	MKIGALAKALGCTVETIRYYEQQGLIPPPKRTSGNFRQYNEEHLQRLSFICNCRNLDISLSEIKSLLNLENASKQQAEEINRVLDKHIKEVATRIHELAHLRMKLIELREKTVSNDEDPMKLLLQHSGVKFVRLK*	mmseqs_cdd	nonviral_gene	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_CDS_0066	persistent	direct	high	407	0.998	GCA_003494195.1_01077
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	tRNA	9699	9774	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	1313	1388	tRNA-Phe	tRNA-Phe	+	514671	.	tRNAscan-SE score: 76.9	Phe	NA	tRNAscan-SE	.	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	tRNA	9777	9852	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	1391	1466	tRNA-Asn	tRNA-Asn	+	514671	.	tRNAscan-SE score: 72.6	Asn	NA	tRNAscan-SE	.	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote	cenote	tRNA	25790	25872	GCA_003494195.1	QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195.1_QQIS01000001.1	GCA_003494195.1|QQIS01000001.1	GCA_003494195_1_1	GCA_003494195_1_1@C1	17404	17486	tRNA-Leu	tRNA-Leu	-	514671	.	tRNAscan-SE score: 57.5	Leu	NA	tRNAscan-SE	.	C1	21939	8387	30326	GCA_003494195.1|QQIS01000001.1@region_8388_30326@tool_cenote_tRNA_0003	.	.	.	.	.	.
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	tRNA	109090	109166	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	3215	3291	tRNA-Val	tRNA-Val	+	339593	.	tRNAscan-SE score: 70.7	Val	NA	tRNAscan-SE	.	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote	cenote	tRNA	126236	126306	GCA_003494195.1	QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195.1_QQIS01000003.1	GCA_003494195.1|QQIS01000003.1	GCA_003494195_1_3	GCA_003494195_1_3@C5	20361	20431	tRNA-Trp	tRNA-Trp	+	339593	.	tRNAscan-SE score: 47.6	Trp	NA	tRNAscan-SE	.	C5	46835	105876	152711	GCA_003494195.1|QQIS01000003.1@region_105877_152711@tool_cenote_tRNA_0002	.	.	.	.	.	.