core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	313806	314309	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	1	504	GCA_003494635_1_1_296	GCA_003494635_1_1_296	-	634654	.	.	hypothetical protein	MSFFKYLVLALFVASCSISSAIAKENVSKEKPKSVEKTATAEKSYPKYVNYAISIDVGDRDIVVGEDGQALSRFKYTITNKSEFPIQNIQWMSVYVHNRQVVHSQDMQIELENTLLPGKSLTINLQIPFAQIDEKYRSIFMNTQEPIHVYKIERSVMFKDKKVVSDN*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0001	shell	direct	high	503	0.998	GCA_003494635.1_00303
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	315073	315366	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	1268	1561	GCA_003494635_1_1_297	GCA_003494635_1_1_297	-	634654	.	.	hypothetical protein	MTTFNKILNPMYSVIAAYSKQEDGSINAKYVLGTGTDNDGAVTDFTPIISEYKWIDPTAAKSIFGQPLTQDDIGKTMEQIYLDRIYAYLKEQGQIVI*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0002	cloud	direct	high	293	0.997	GCA_003494635.1_00305
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	315403	315864	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	1598	2059	GCA_003494635_1_1_298	GCA_003494635_1_1_298	-	634654	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MSKVVIAFYKHKRERNSVKNTLFRFFDDAIKFFTRGPYSHCEIAISNPQPSKIYTCFSASNRDGGVRKKRMELPPDRWDLVELEISLEEVIAFFEKTKGLKYDLIGALGVVLRIKDSKTKYFCSEWCAKCLGIDKPYRFSPNSLYKHLTNSHG*	phrogs_hmm	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0003	cloud	direct	high	461	0.998	GCA_003494635.1_00306
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	315857	316477	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	2052	2672	GCA_003494635_1_1_299	GCA_003494635_1_1_299	-	634654	.	PFAM:PF14301.5	tail-protein	MQVFLFDQQLISVINRKEEITDETCLITDQEREKIEQTLYEKGHFWRIDKYTVGASGAQPTENHKWNDEKHEWEIDNELVNANLAKKRAELWETIKEKRLQATRTGVEVTLSNGQVRHFHTDQVARQEYDGMGLTIVLGTFEPRKWKTIENDWVLFDLDTFKALAQAIKGKVDHDYRNAEVLKAQIDKSDTPENINLNQGWSQSYV*	phrogs_hmm	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0004	cloud	direct	high	620	0.998	GCA_003494635.1_00307
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	316491	316937	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	2686	3132	GCA_003494635_1_1_300	GCA_003494635_1_1_300	-	634654	.	.	hypothetical protein	MAQYGIRAKTGLIEGLELKGVTGSFSGSLTVKELIGGGVIEQASFTLEKTGERKRIRYISGYNDSDTPHYGTKWVDVYGVTIVIEPVPVDRYIVYDNTSFVLRANQRREIRITKSDNVDADNGNVSYVSKEVLVMSYMISTQYSIHKK*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0005	cloud	direct	high	446	0.998	GCA_003494635.1_00308
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	316937	317284	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	3132	3479	GCA_003494635_1_1_301	GCA_003494635_1_1_301	-	634654	.	.	hypothetical protein	MYYIDEPVPIDKSFTDKPICAWHIAGRLTIDYINKNTTIELVSWTDKQAFLARGESLVTFLTVNDCPRFSVDPSLFALRALTTVEGSPFYRKQVKCDYDLDHISQVWIDENKGVE*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0006	cloud	direct	high	347	0.997	GCA_003494635.1_00309
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	317293	321246	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	3488	7441	GCA_003494635_1_1_302	GCA_003494635_1_1_302	-	634654	.	PFAM:PF13550.5	tail-protein	MGKGGGGGGHTPVEAKESGRSKQLVKIVEVISEGEVYGLADGMKSIYFDKTPVQNKDGSYNFKNVQVEGRVGGQVQDLMAGFNTSEKEVGVGALVKKNLPLTRTVTDAKVSRLRLTIGVQSLFKQEDNGDTNGTTVNFIITIGSRTYPVSISGKYSSQYLQHHTFDNLPSVPFIVKVERTTDDSTIQRLQNNTIWSSYTEIIDTEFTYPNTALMGVKFDSEYFSNIPTRTYDLLGLKVKVPSNYDTRTRQYTGIWDGTFKIDWTDNPAWVLYDVVTNKRYGLGGRLGEFSADKWALYQVAQYCDQLVPDGFGGQEPRFTCNAWLTEQRSAYQVINDICSIFRAMPVWNGQQLTVVMDRPADPVWTYTNANVDESGFSYTFSARKSRHNAIQVEYADKENSYEKAIEYVSDDESIRKNGLNVKKITAFGCTSRGQAHRTALWLLQTEKLETKTVTFTVGAEGLMHIPGDIIKVADTHYAGTNIGGRVLAVNGMTVTLDREITISGNSYLSYINANAKHQNIKIISVNGTEVTLDQPPLGLEIYGVWSLTTQQVTSQLFKALSIKEDDKGKYTIMALQHEPQKEAIVDNGAKFEPVGTIVLTTPQISNIGVAVNSDGGVSVDSSVTGGNGIVKYDIRIYKGGVLYDMRLGQQSHNLNIDGLENGDYSVLIQVKNENGQLLSEKTQTFTINKPPAPTGVRTTGGLGNITLEWDWVDDATATEIFTSETDDIKTAKRLTKVTARMYTHEVRAKQVRYYWLRHVRGVNVGPFNQQSGIKGESAVDIDAELDVLNKKLSQTLNIQAENLTGKISKSQLDSALTGELAGIQSATSNASAQINAINKNNEAFSADIRQKISALELSSRNIEVDVGGRNYLLRSSGTATAWNVSPDAKENWRGKKLTLSVYLNAKGIVRGGRNRIGLSMFLYYMDNSYTWVECWLSNHQGDYSGRLKSTIQLLDKPIKSISNCSFKVEVGGGTCVATNPKLEIGNVATDWNPAPEDLTTIIQFEDIKSSLTNESNARVAWENSANSRIGNAEATINQLGGTKANKDEVATIAAQALRSQWQSDAKAKVDEVSRAISSETNARTEWQRSAESKINRVDGFSARIDEINRTVTDVSGKVSATRTIKTQAIAGGRTAIAGIALGASSSGQDVESSVIVMADRFQVVKNASDSSPKPILRVESGQTVLNGDLIADGGITTPKLAANSVTAIQLTSNSVTARHVAANSIGATHVAARSLTADKLNVTSISSISADLGAITGGSLKIGSLNGNFGTLFEVQSNGGFRLISRDASGGIELSSATRALHVWEGGAEVVRVGKLS*	hallmark_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0007	cloud	direct	high	3953	1.0	GCA_003494635.1_00310
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	321257	321841	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	7452	8036	GCA_003494635_1_1_303	GCA_003494635_1_1_303	-	634654	.	PFAM:PF06805.11	tail-assembly-protein-I	MVNVRFYGSLKQFGSEFRLDCQTTAEIVQALTSQIPKLRQFIQQGLFTVRVGRDYFDNRYLEQGLSHKLKDDATVHFTPVLKGSKRGGLFGVIAGVAIIASAIALGPLAGIISTKAAWIVGAVGASLLLGGVAQMLTKMPEMKMGTEKEKKQSTAFSNLSNMTAQGKSMPLAYGRMRVGSLIISQGVETMDTEI*	hallmark_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0008	cloud	direct	high	584	0.998	GCA_003494635.1_00311
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	321784	322515	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	7979	8710	GCA_003494635_1_1_304	GCA_003494635_1_1_304	-	634654	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MEELKQSIITYSKSKEPQESCGFIVLVGGEKVFIPCENASEDKENHFEISPEDYIAASEKGEVLALVHSHSQGEPKLSQADLQTQLYCQLDFWLVCDEQIHIFPKITFLIGRDFKHGEMDCYTLFRDFYRLSGCNLPDFERDDYWWEDGFNLYLDNMAKHGFEQVKEPQIGDVILINIGADVPNHAAIYVGNQMVLHHAPKRLSKRDLYDGYWLKHTHSIWRYNAWSTLDFTVALNSLDLNLG*	mmseqs_cdd	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0009	cloud	direct	high	731	0.999	GCA_003494635.1_00312
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	322518	322685	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	8713	8880	GCA_003494635_1_1_305	GCA_003494635_1_1_305	-	634654	.	.	hypothetical protein	MNDKRFTFKFLGVLMEAINITPKEIRKTMWTAAIILFLFAFIWRSPELITAIRWW*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0010	cloud	direct	high	167	0.994	GCA_003494635.1_00313
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	322765	323478	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	8960	9673	GCA_003494635_1_1_306	GCA_003494635_1_1_306	-	634654	.	PFAM:PF05100.11	minor-tail-protein-	MPALISNAFKLDLAKLEQNALIELFEVDLRGLKDNDGMNGELYRFYAGTNEKSQSIVWQGSKFEPFAVKADGFEMSGNGPSNRPTLTLGNINGFITALCNRFDQCLGGIVRRRLVYMHYLDAVNFTNGNKKADPTQEALSYFVIEQLSSLNRDIAQFTLALPSETDNALIGARMITSTCSWLYRSSECGYTGRAVADEKDQPTADPKKDKCSGLLTGCKLRNNTHNYGGFVSVDKLG*	hallmark_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0011	cloud	direct	high	713	0.999	GCA_003494635.1_00314
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	323478	323807	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	9673	10002	GCA_003494635_1_1_307	GCA_003494635_1_1_307	-	634654	.	PFAM:PF05939.12	minor-tail-protein	MMETFKWCVRPNYSVDNEPNISEVVFGDGYTQRRLNGINALLKTYSVVIKVRNKSAPDVLSFFERHQGIKPFYFIDPLTKQLKKVICKKWPAKVDQSYTEITCDFKEEP*	hallmark_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0012	cloud	direct	high	329	0.997	GCA_003494635.1_00315
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	323804	327163	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	9999	13358	GCA_003494635_1_1_308	GCA_003494635_1_1_308	-	634654	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MSSLGSLNILLSLDSIQFNQALDKSSYQTQKFAKQFELNFTKAQAKAKQFSERTTQYLNNIEKAANTINKTTRNTFWAGIVSSGGSYLSSGISDVMKYADSYTELQNRIRLVTNSQTAMVAATESVFDISLKTNQAVGATAQIYQRFAQNADRLNLSQLQVSELTETVAKSVAISGASAGAAEAALMQFGQALGSAELRGDELNSVIEQTPGLADAIAKGLGVTTGELKNLAKAGQLDIHTVIQALVKARDTVDNDFNKRVKTLSMSFTNLETSITKFSGEANSALGVTQKLATGVDFVSDHLQELIIGLGSLTAALAIGHLSKYGLELLKTGYASAKNKLAYYAEAKAIATKATAMRTAAQVEMASLNAQFQLAQSEQTRFALRERMKIQSAQIIALAQAEATAKRNLATATNIAAMAAKGLQSVMALLGGPAGVIGIAATSLIFFSSQAAQARQWALDTTTANKGLAESYNELSEAALSLKVEKQLEDIEKYYKEIEKVKATIATKKVSANFDGFQVDNGISNKELEHLQNEIKSIEENAGLAEKALVKMLAPLAENMLRSGKSLDDVRQKFKLLGVDAVTANNIIATLPKSFSDAANGAKNATDKTLDLKDAIDKLNGKSTTLAQKLEVAKLKQQGQAKSAYVLAGLYELLGKEGAEYNEVLIGIATGTITAANAADKAVGLSVETLKKILDGKAQLEQDFTKENEINKIETGLKESKGSKTDYVKQYTDQVSEMEKRLSELRANAQDIALFGQTSQYQEVNKLTQDIAANAEKYAHFGADGLAKLKDMAAQIDAAQQVVSINQFTFDNSEKLRAMEFELTLLGKTRQEQELMQYNHQLDLEAARLKIGMSQENIAKLDEEIAKLKERRGIIQQQTEESRGSAILGFQQGMKTIEDQVSDVAGNISNITVNAFNGMSDALTDFIMTGKTDFNSLAKSIIKDIVQMTTKMIIFASLKAAFGGTSFGKFMGFSGGGLVPELKYTGGLVGFDEGGFTGIGGKYTPAGIVHKGEYVITKEATARLGRGFLDHLNYGSVRRGFANGGGVGVPRLPTMAYQPKSSGNIAVKVINNGEPMDATVSQQSKNGQLKITVELMRKIAQQESGKILQENMRYGGMLG*	hallmark_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0013	cloud	direct	high	3359	1.0	GCA_003494635.1_00316
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	327216	327452	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	13411	13647	GCA_003494635_1_1_309	GCA_003494635_1_1_309	-	634654	.	.	hypothetical protein	MIEFVKFFAKLSFITFIVIGYLLLLSIIDFSYILSFIGVYVAIFATCLVVAIIKENNRINKLRIAEQDKNRVKYVIIN*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0014	cloud	direct	high	236	0.996	GCA_003494635.1_00317
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	327526	327750	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	13721	13945	GCA_003494635_1_1_310	GCA_003494635_1_1_310	-	634654	.	pfam13227	Protein of unknown function (DUF4035). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 67 and 93 amino acids in length.	MPEHHLQEYEMFYQEQPFGLWREDYRTAQVSHLLAMINRDPKSKAPELSDFMPFYQEKMDDEDDDGVADYLANR*	mmseqs_cdd	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0015	cloud	direct	high	224	0.996	GCA_003494635.1_00318
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	327795	328202	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	13990	14397	GCA_003494635_1_1_311	GCA_003494635_1_1_311	-	634654	.	PFAM:PF16462.4	tail-assembly-chaperone	MNLREKLLANHPKITPIIINGVTFYIREITVGEMNRVLYGQQQELVRIAESQGIELNFNDEKHLTEQLAKIYDPNRLTRTLAMRLCDQDGKNLFDVDNPDDLAALSKLDKVVFEQLTQAIVEDEPKNSLAEESSK*	phrogs_hmm	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0016	cloud	direct	high	407	0.998	GCA_003494635.1_00319
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	328256	328912	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	14451	15107	GCA_003494635_1_1_312	GCA_003494635_1_1_312	-	634654	.	PFAM:PF06199.10	major-tail-protein	MATKTTPFQGTKFYLGIGLNEEKTITAATVKPNATITSTGHGAKAGDFAKVSGLGSLDGYYPIKSVTENEITFADEVNWRDQDEPTDFSKAKVSLVKWSSNFCAIKQIEGDGDTLGEEDITTMCSEGTETEAGEIEYGSIKLTFFYAPATTMQADLRKKFYDKETFPWMMKLRNEQGSLYGTGFIQTSPNFSGEVKGKFESGVTIKKAKRDYHLPVSA*	phrogs_hmm	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0017	cloud	direct	high	656	0.998	GCA_003494635.1_00320
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	328916	329260	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	15111	15455	GCA_003494635_1_1_313	GCA_003494635_1_1_313	-	634654	.	PFAM:PF05657.10	tail-component	MIQNKLFNALAPLVPGRCFYGLIPETNKSFPVIVYQFPTITPNPALEDGDLDDYQVQIDVYSPNPDDIFRLRKPIFNALSAEFEFAERLNDFSDYEPDTKLHRRVISYQIAYGE*	hallmark_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0018	cloud	direct	high	344	0.997	GCA_003494635.1_00321
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	329262	329741	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	15457	15936	GCA_003494635_1_1_314	GCA_003494635_1_1_314	-	634654	.	PFAM:PF04883.11	tail-component	MANLNVKVTGLKELKHAMDSLDRKVRKNISVKAMRKGGAIIRDKARANAPVLEHSVPHRNRGTLRKAISASTKIAKNGSVNTRIFVRKLKISKITAFKEHGKGSSGNPNDPYYWRFVEFGTSKMSARPFLRPAFEQSKEQAAQTIITTLRDTIISEAGK*	hallmark_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0019	cloud	direct	high	479	0.998	GCA_003494635.1_00322
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	329734	330057	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	15929	16252	GCA_003494635_1_1_315	GCA_003494635_1_1_315	-	634654	.	PDB:2KZ4_A	Head-tail-adaptor	MNIGKLRHRITLLKQVNDVNDYGASVQTWRTVATVWAEVRPLSGREYFSAQQVQSEVTTQIWLRYIDGIKPSMKVKFANREFEILSVLNTQERDVSLQLMCKETVNG*	hallmark_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0020	cloud	direct	high	323	0.997	GCA_003494635.1_00323
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	330069	330395	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	16264	16590	GCA_003494635_1_1_316	GCA_003494635_1_1_316	-	634654	.	CDD:cd08054	Head-Tail-Connector-Protein	MQITLDEIKLQCRIDSDDEDNLLSVYLVAAKAIVENHTNRVLFEKLPEDESKPANAQEITGDLKIAILMLVAYLYENRGGWNEVHGGANIDLPPAVKAIIERYRFIKV*	hallmark_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0021	cloud	direct	high	326	0.997	GCA_003494635.1_00324
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	330443	331648	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	16638	17843	GCA_003494635_1_1_317	GCA_003494635_1_1_317	-	634654	.	PDB:6TSU_J4	Major-Capsid-Protein	MAKLHELQEKRRNIAAQMRQLNDEIGEKTWTEEQRTKWDSMKSELGGIESQIEREESLRSTDALFVEEQRQIETESKPAIDVEVKRSQAFNSFLRRGLGELNQEERQVMAELRAQAAGTDNKGGYTVPKEMQARIVEQMKAYGGIASVAQILNTADGRIITWATANGTAEEGELIGENVAATELDTEFGTAEIGAKKLSSKIIRVSNELLQDSGVDIEEYLSRRIAERIGRAEAKYLIQGTGVGSPAQPKGLQTAVTGVTQAAAAAVTWQDFNALIHSVDPAYRNVGNTRIAFNDNTLKTLKEMVDGQKRPLWLPDVAGVAPATILGHQYVIDQGIEDIGAGKKFAYFGDFNRFIIRRVSGMTLRRLVERYAEFDQVGFLAFHRFDCVLEDASAIKALTGK*	hallmark_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0022	cloud	direct	high	1205	0.999	GCA_003494635.1_00325
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	331716	332318	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	17911	18513	GCA_003494635_1_1_318	GCA_003494635_1_1_318	-	634654	.	PFAM:PF04586.16	prohead-serine-protease	MSDVEKRSYAGEVRAENRDNEPTHIIGYGSVFNSKSEVMWGFREIIMPGAFDDVLEDDVRGLFNHDPNFILGRSKAGTLSLSVDETGLKYDIIAPDNPTIRDLVIAPLKRGDITQSSFAFKIARNGDDWYENDDGVIIREIHKISRLYDVSPVTYPAYQEASSTARSLEAWKEARDSGTIAKAVSQKAARERFLSLISAK*	hallmark_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0023	cloud	direct	high	602	0.998	GCA_003494635.1_00326
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	332311	333525	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	18506	19720	GCA_003494635_1_1_319	GCA_003494635_1_1_319	-	634654	.	PDB:8CEZ_K	Portal-Protein	MIFDNLFGTRSLENPSVPLSSEAAYDELFGAQPTKVVSPDLAMKLSAVYACVYVLSSSLAQLPLHVKRKNGDKVETAKDHPAYYLLHDSPNFWQTSYKMREYAQSSVLLYGNAYIHIVRNHNGAVQSLESLEPWKVQLLKNGGRYVYAYYDDDKTLSITPDDMIHIKSLGPSIKTGKSVIQTHAETIGLGLDARKFASGFFGGNARPAGILSVKTPLNSNAWETFKKMWQTAQDKLRSEENKTILLPAELDYKALTVSPVDTELLSMMKLNRSEVAGIFNVPAHMINDLEKATFSNISEQTIQFIRYSVMPWVVNWEQELNRKIFTDAERKAGYFVKFNLAGIMRGTAGERATFYHAAITDGWMSRNEARQLEDMNPVDGLDEMLVSVNAAKQANNKQTENTNE*	hallmark_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0024	cloud	direct	high	1214	0.999	GCA_003494635.1_00327
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	333525	333674	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	19720	19869	GCA_003494635_1_1_320	GCA_003494635_1_1_320	-	634654	.	.	hypothetical protein	MRNVILDLLGLTGFVMLCSGTYLKYGLDVSLMCGGTLLLLLVISVSRGK*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0025	cloud	direct	high	149	0.993	GCA_003494635.1_00328
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	333671	335374	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	19866	21569	GCA_003494635_1_1_321	GCA_003494635_1_1_321	-	634654	.	PFAM:PF03354.14	Large-Terminase	MTDNVKKAIKYAKDVIAGKIPACRFIVKTCQQFIDDLEKQSAIKFPYYFDEVKAEKACKFIQYLPHTKGEWASKRQNITLEPWQLFIMANTFGWLRKSDNLRRYREIYIEVPRKNGKSAISAGVGLYMFCMDNEFGAEVYSGATTEKQAWEVFRPARLMCKKTDLLCSTFGIEVNASNLNRPADGSRFEPLIGSPGDGASPSCAIVDEYHEHKNDELYTTMLTGMGARKQPLMFIITTAGYNIEGPCYDKRREVIEKLSGAIPNDELFGIIYTIDEDDDWTDESVLRKANPNFDVSVYGDYLISQQNKAINNARLTNTFKTKHLNVWVSAKESYFNMVSWENCKDETLSLEDFQGDDVTLGLDMARKLDMNSLVKVFARIIDGKRHYYCIAPEFFVPEDTVYNTDTALKRVVDKYQKWVNSGHLTSTDGAEVDYREIEEVIKDTNQEHRVACVAIDPHGAIAISHNLADEGLNPITITQNYTNLSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTVPGNDDVVRPIKEIPENKIDGAVALMMAIGRIMLSVDDNFFPDEVLEL*	hallmark_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0026	cloud	direct	high	1703	0.999	GCA_003494635.1_00329
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	335371	335853	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	21566	22048	GCA_003494635_1_1_322	GCA_003494635_1_1_322	-	634654	.	PFAM:PF05119.11	Small-Terminase	MTGKSLVSGRGRKPKPTAVKTRQGNPGKRKLNENEPKFSEFDEHSPPPDDLDENGKTMWAFVLRELIPQKVLLKTDLQTVANYCIAYQNRKKANQDIERYGSVIESDTGIKRNPAYTTLKEAMADMAKFGSLLGLDPSSRTRLVGNADNEVKNPFAELMQ*	hallmark_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0027	cloud	direct	high	482	0.998	GCA_003494635.1_00330
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	335981	336370	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	22176	22565	GCA_003494635_1_1_323	GCA_003494635_1_1_323	-	634654	.	PDB:5H0M_A	HNH-endonuclease	MSDNTRLFILVEIMPARIPKACRKQGCKNTTINSNGYCDEHQGCGWQRHQKGKTSSQRGYGAQWRKIRAVVLVRDNHLCQECLKQGRFVTATTVDHIIPKAHGGSDDVTNLQSLCDSCHKFKTARERLK*	common_virus_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0028	.	unmatched_CDS	none	0	0	.
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	336374	336613	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	22569	22808	GCA_003494635_1_1_324	GCA_003494635_1_1_324	-	634654	.	.	hypothetical protein	MCLIPLLLTVLLTSCASKPQVVHCPVLPVAYIAHLDKTPFNGVSYGDVAQYAVILKRERDVCLARVDKIREWHTEKLSK*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0029	cloud	direct	high	239	0.996	GCA_003494635.1_00331
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	336561	336884	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	22756	23079	GCA_003494635_1_1_325	GCA_003494635_1_1_325	-	634654	.	PFAM:PF10828.7	Rz-like-spanin	MTKYIYIALGTVVVVLFGVLRYQSSVIDELNITTKQQAQTIQQQSESIIQLKADVAENQRITLELSKAENASREEQNEVLNSIPKAEKQSSVFNTAAPNSLINFLRK*	phrogs_hmm	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0030	cloud	ambiguous	low	96	0.296	GCA_003494635.1_00331
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	336877	337479	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	23072	23674	GCA_003494635_1_1_326	GCA_003494635_1_1_326	-	634654	.	PDB:3WH1_A	Chitinase-	MTMMISEVTFNKIFPHAVKGVYQAISEQIEKAGCINKMQQAMFLAQCGHESGGFTRFKENLNYSWSGLSQTFRKYFPDPLTAKKYERKPELIANRVYANRLGNGDEKSGDGWKYRGRGLIQITGKDNYSAFRKWLGRDIEPEDIANNLDLSVKAAVWYWKLCELADLNSVEKVTRRINGGLNGIDERCKLYRALMVTDND*	common_virus_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0031	cloud	direct	high	602	0.998	GCA_003494635.1_00332
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	337445	337804	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	23640	23999	GCA_003494635_1_1_327	GCA_003494635_1_1_327	-	634654	.	TIGR01594	phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions]	MPIKEPDVWALIWSWLQINLSSSSIQSALWALFISVLRLGFMRKKPAIRYMLIDAAMCASIAGVAVPICTHIFGHSEYSSFLGTMIGFVGTEKIREFLFKFINRRIEKDDNDDFRSDVQ*	mmseqs_cdd	nonviral_gene	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0032	cloud	direct	high	359	0.997	GCA_003494635.1_00333
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	337863	338072	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	24058	24267	GCA_003494635_1_1_328	GCA_003494635_1_1_328	+	634654	.	.	hypothetical protein	MAKAQGFEPQLAVLETAVLPLDYALKFDNKKAPTVSDQGCKILLCVCYALKPQLTEYGTLSLASNQVFL*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0033	.	unmatched_CDS	none	0	0	.
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	338086	338727	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	24281	24922	GCA_003494635_1_1_329	GCA_003494635_1_1_329	-	634654	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MKNQIQFSTFNFKDLPVRVISDPKGEFWFCGTDVCQILGYTNSRKALQDHCKQGGVTKRYTPTKSADQEMTFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQLSLPEPEKKYTFEFTEYELEQLVWLWCGHKQMNTLLGDMIKPLETIGSYFTGMVISHHQEYRRQYKNTLPTIQRLIQPFKASNRMNWERAKNLIAQ*	common_virus_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0034	cloud	direct	high	641	0.998	GCA_003494635.1_00335
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	339003	339371	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	25198	25566	GCA_003494635_1_1_330	GCA_003494635_1_1_330	-	634654	.	PFAM:PF06530.11	anti-termination-protein-Q-like	MSYSVERVLEKWGNCWGRDRIGTEYPSTTISIPVLPTVRKAHIRFLTDDECLKIEEQIMNLHEDSLLQYQILMALYVQQANERDICTALHISTAYMYRERAKGVRFLKGAFTGAKIKFMFLG*	phrogs_hmm	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0035	cloud	direct	high	368	0.997	GCA_003494635.1_00337
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	339374	339922	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	25569	26117	GCA_003494635_1_1_331	GCA_003494635_1_1_331	-	634654	.	PFAM:PF05766.11	NinG-recombination-protein	MAKEYKCKVCGKAFIKTFSSTQKVCSPECAIKLARDNAQKAQERAEKKKQRERKAKLKSRSEWLKEAQSAFNKFIRLRDKDQPCISCGRYHQGQYHAGHYRSVGACPELRFCELNVHKQCAPCNDHKSGNIIEYRINLINKIGVDKVAWLERQDHEPKKYTIEDCKAIIKYYKAKIKELEGV*	common_virus_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0036	shell	direct	high	548	0.998	GCA_003494635.1_00338
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	340025	340159	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	26220	26354	GCA_003494635_1_1_332	GCA_003494635_1_1_332	-	634654	.	.	hypothetical protein	MFGDEDDELYEKVQNEDTHIAKAIVAVWLGGYFLVHFLVWYLTK*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0037	cloud	direct	high	134	0.993	GCA_003494635.1_00340
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	340195	340611	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	26390	26806	GCA_003494635_1_1_333	GCA_003494635_1_1_333	-	634654	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPTDDKKPLVVKIQPITRSLEQNSKLHALLSDISKQCEFNGKKRDIDTWKMIMVSAHKIATGGQAEMVIGLEGEVINLRESTAQMSVKRLASLIEYITCWGVQNGVKFNDRWRF*	mmseqs_cdd	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0038	cloud	direct	high	416	0.998	GCA_003494635.1_00341
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	340616	341539	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	26811	27734	GCA_003494635_1_1_334	GCA_003494635_1_1_334	-	634654	.	PFAM:PF02384.15	DNA-methyltransferase	MSFEEHNNRKKANKFAEYITGESLRRYLAGKVEKYLGKNPSVFDGAAGSGQLEQFIQPSKFIAVEIQAESCAALANNYPDAEIHNTSFFLYQSEPKSDCVVMNPPFSLKFKELAEEEKAAIQADFPWKKSGVLDDVFMLKGLANAHRFGFFIMFPGIAYRNTEKTLREVIGNQLVELNLIQNAFEDTPISVLFLVVDKTKSNNKTYRELYDCATNKIINADEWLINSDKWDTVSPPEPPKEKVDPMKLELMSQAQLKEQIRAQIQFSGMVFDLEGWPREEFEKFCDEVCALIQEEKKSNRFLFGWSE*	phrogs_hmm	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0039	cloud	direct	high	923	0.999	GCA_003494635.1_00342
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	341536	341760	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	27731	27955	GCA_003494635_1_1_335	GCA_003494635_1_1_335	-	634654	.	.	hypothetical protein	MTSYKCPKCGAELEDFYTPDYFISSSEWDDDRFRCNGHLIEPIPFPQVSKYSAVNRTKSCGYFGLEDLGLEYKE*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0040	cloud	direct	high	224	0.996	GCA_003494635.1_00343
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	341757	342377	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	27952	28572	GCA_003494635_1_1_336	GCA_003494635_1_1_336	-	634654	.	PFAM:PF06992.10	Replication-protein-P	MNQLTNQSLHQGVSPQAEKFIDTLFDQLCASCPQLLNLTPERLQVVKRQWILGFAENGITKITQVKRGMAEMRAKPNGYLPSVGEFIQACKVQDYHALGLPNEAELYQRYKTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKAIPKLLTEAVEKVRSNFPFEDIPKMIPVKPSFYDKAKADKARDSLMAMMKGALQ*	rep_hall_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0041	cloud	direct	high	620	0.998	GCA_003494635.1_00344
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	342374	343096	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	28569	29291	GCA_003494635_1_1_337	GCA_003494635_1_1_337	-	634654	.	PDB:2RU8_A	Primosomal-protein-1	MSMRLMVQAMNCEVGNPARKLVLLKLADNANDDGICFPSYQYIADKCEMTRRSAISHIEYLIKMGLVSKKERKNKDGSISNLYFLHLEQGSEIFALGGENISLGSENFALGGSENISPRTSHSLEPVNEPKKTTQKSESEMLLEQFGITGQLAKDFIAHRKAKKGVINQTQLNRLQKQADKAGISICEAVEICIERNWQGFNASWDWRDEKLRTSQAKKMSFEEKNALPWNRPEDWENVL*	rep_hall_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0042	cloud	direct	high	722	0.999	GCA_003494635.1_00345
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	343093	343794	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	29288	29989	GCA_003494635_1_1_338	GCA_003494635_1_1_338	-	634654	.	PFAM:PF03374.13	KilA-protein	MANSLRNIQMNQLLTITKENTSTLTMSSREIAELINKNHSDLCRSIERLIAKEVIWGYQPMAYTHPQNGQTYYEYHLSKRDSLIVVAQNCPEFTAAIVDRWQELENQQKPTALIPQSFSEALMLAAKLQAEKERNAPKVAFVDHYVEVGTSKSFRETAKILKMPERALVNRLMEDKYLYRQSGVLLPYQSAHTKDLFTVKTGTAEHGHNYTQTRVTSKGIEFIASRYASELML*	common_virus_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0043	cloud	direct	moderate	675	0.962	GCA_003494635.1_00346
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	343815	344141	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	30010	30336	GCA_003494635_1_1_339	GCA_003494635_1_1_339	-	634654	.	PFAM:PF10078.8	CII-like-regulator	MTVIYQQEYAMARNKLTRSARVLSDQVIEKYYKQKQYEVAEGMETASSTLSRFISNEEFTQTFNFIAACQFGVFDTDTHIAIEKSEFEMLLLASQGFDKRLREKYLGK*	phrogs_hmm	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0044	cloud	direct	moderate	297	0.908	GCA_003494635.1_00347
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	344138	344377	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	30333	30572	GCA_003494635_1_1_340	GCA_003494635_1_1_340	-	634654	.	PFAM:PF10078.8	transcriptional-repressor	MGNLKHIIDSLGAAKVADLCGLSVRAVYKWRTSNALPRTEYTGETRYSEILSQALGGSVSAEEIRHFSKPIKSGSAIIA*	phrogs_hmm	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0045	cloud	direct	high	239	0.996	GCA_003494635.1_00348
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	344477	345142	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	30672	31337	GCA_003494635_1_1_341	GCA_003494635_1_1_341	+	634654	.	PDB:2FJR_A	Repressor-protein-CI	MITEEKIKQDFAARLDIACKRKNLPEKGRGKVIADILKITPKAVSKWFNAETLPTQANIYVLADFLGVTKEWLTYGDKNASIEKIEKQISYPLLSPIQAGLWTDIRSLEGFDGYEMIPSTVIASENSFYLRIEGKSMLPRFNEGDLVLIDPDIAPTPGKFVAAINGDNEATFKQYKELGTRTPEGIPHFELVPLNPMFPTLSSLNQEIRIIGVARERVETL*	common_virus_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0046	cloud	direct	high	665	0.998	GCA_003494635.1_00349
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	345336	346160	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	31531	32355	GCA_003494635_1_1_342	GCA_003494635_1_1_342	+	634654	.	cd18722	LabA-like PIN domain of Pseudomonas putida S16 NicB and related proteins. Curiously NicB from Pseudomonas putida S16 is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine. This subfamily also includes the uncharacterized CPP15 (plasmid) protein from Campylobacter jejuni. This subfamily belongs to LabA-like PIN domain family which includes Synechococcus elongatus PCC 7942 LabA, human ZNF451, uncharacterized Bacillus subtilis YqxD and Escherichia coli YaiI, and the N-terminal domain of a well-conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. Curiously, a gene labeled NicB from Pseudomonas putida S16, which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like PIN family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	MKKTAILIDGGFFFAKVGFFARRYFKSRDITADNLIDLMWRIVRFHTEIERGKHSGREAQELYRIYYYDSPPLDKQVKLPHPENGETTPRDKNFKAEPMNKLRAEFHLKLKENRKTALRMGRLQSTDWRLNEHTLKALRQGKKKWEELTNDDWYYEITQKSVDVKLGMDITILSYEKLVDVIVLIAGDSDFVPAAKQARIKGVDFILNPLKQEISHDLAEHIDGIQSFSIGVGLAEILKCDPDNNPEWWEEYKNKIASKEIRKQNRAKSRKKKK*	mmseqs_cdd	nonviral_gene	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0047	cloud	direct	high	824	0.999	GCA_003494635.1_00350
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	346188	346355	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	32383	32550	GCA_003494635_1_1_343	GCA_003494635_1_1_343	-	634654	.	.	hypothetical protein	MKKEFKKWLISLNCEGINSLGINEIVSRVDEELRIVRANEQERIVLEELIAEFKC*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0048	cloud	direct	high	167	0.994	GCA_003494635.1_00351
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	347593	347910	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	33788	34105	GCA_003494635_1_1_344	GCA_003494635_1_1_344	+	634654	.	.	hypothetical protein	MKKHQLKNSFTYFMKGSEKALKIMTCLFDAIIVVVISISVKANQTDWHDNELSQQIQAETQCELKGGIYENGACLPPNLTLAAEKELQAYTAQKQAEINRTWSKQ*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0049	cloud	direct	high	317	0.997	GCA_003494635.1_00353
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	347907	348203	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	34102	34398	GCA_003494635_1_1_345	GCA_003494635_1_1_345	+	634654	.	.	hypothetical protein	MKPSDDYYYQLGAAYQRKVDWQAGYEIALDEVATEIDNDLKQGDQTHYHELTEMLCDNDNFWLAIGSGASYEPYRQEAIKKIAERELHERMNDYDPDI*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0050	cloud	direct	high	296	0.997	GCA_003494635.1_00354
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	348227	349132	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	34422	35327	GCA_003494635_1_1_346	GCA_003494635_1_1_346	+	634654	.	PFAM:PF09588.9	RecE-like-recombination-exonuclease	MFDLILSTESRVLSTNITDFEKQADQFLSTLTVKFETDEDFAAAKEEVKTLKEVENKIRAAITSAQSGEIAALITSAENIAERFRQERLARDKLVKSKESEIKENIVNTAFENISKVRYGYESDISLALERTMPKQDLLKRLHNATARRSTLATLTKAVQAEENLILAELAQESARLIARRKLLPVSHEYLFKDWLELIISNCDLKPIVEERIEMEEQREQARVAQAQAEAEKAKTEEAETESSVEKTQENLTALNENDSKTYRFEVRIGFTSTLSKAIELAKQVKEQFGLENNVSLKKMN*	phrogs_hmm	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0051	cloud	direct	high	905	0.999	GCA_003494635.1_00355
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	349145	349999	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	35340	36194	GCA_003494635_1_1_347	GCA_003494635_1_1_347	+	634654	.	PFAM:PF03837.13	RecT-protein	MNTLPTNIQTALTERNIDTAVWTTLQNSVFPGAKDESILLAVDYCKARKLDILKKPCHIVPMSVTDAKTGNKNWRDVIMPGIYEQRITAFRTGQMAGQDEPVFGDTVTFRGIDAPEWCRVTVYRFINNERCAFSHTEYFCEACATTKEGKPNSMWSKRPRGQLAKCAEAGALRKAFPDELGGVITADEVNEDPINQHGVATSDNSSTVIETQSVELITPEQIKEIENLIEVTGSNLMGLLAAAGNVPSIEKITKSNAEHAINRLLSKLNEQQAKDERNDEDIPL*	common_virus_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0052	cloud	direct	high	854	0.999	GCA_003494635.1_00356
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	349996	350616	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	36191	36811	GCA_003494635_1_1_348	GCA_003494635_1_1_348	+	634654	.	PDB:3SZ4_A	Exonuclease	MIDGLITLDCEQGTEEWLTARLGIPTATGIENIVTPTGKKSSSQIKYMSELIEESILGLQDSGYKSAFMERGNQLEPLARSAYEFLTGNAVKQVGGVYLNEKKELMVSPDGLLPELKKGLEIKCPKMSTHIQYIINGGVPSEYIIQVQANLWVTGYKTWDFVSYCPEYYKQPFYLFTAQRDPILMKAFDKLVPEFIKTLKAYKSTE*	common_virus_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0053	cloud	direct	high	620	0.998	GCA_003494635.1_00357
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	350619	350762	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	36814	36957	GCA_003494635_1_1_349	GCA_003494635_1_1_349	+	634654	.	6V7U_A	Quorum sensing anti-activator protein, Aqs1	MDEKLEELKEAYLFYKKALKDKDAMACGCLRDAEEWLLRELDNLFKD*	hhsuite_tools	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0054	cloud	direct	high	143	0.993	GCA_003494635.1_00358
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	350771	351211	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	36966	37406	GCA_003494635_1_1_350	GCA_003494635_1_1_350	+	634654	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MAGINKVIIVGHLGNDPEMRTMPNGDAVANISVATSESWNDRNTGERREVTEWHRIAFYRRQAEICGEYLRKGSQVYVEGRLKTRKWQDNNSQDRYTIEIQGDVLQMLGGRQDEPKSQSKSQSKPKKPDPLSAAAEQDGFNDDIPF*	common_virus_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0055	shell	direct	high	440	0.998	GCA_003494635.1_00359
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	351274	352539	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	37469	38734	GCA_003494635_1_1_351	GCA_003494635_1_1_351	+	634654	.	PFAM:PF13884.5	tail-fiber-protein	MAEENKEIIAYKGFNQDWTCLGYQYEVGKTYEHKGDVKACGSGFHACEYPLDVLSYYSPAVSKFAVVKMSGETSKDSDDTKIASAKITIETEINLPEMVKKAVEWIKGKVDWDAAKISNTGDCSAATNTGYQSAATNTGNQSVATNTGNQSVATNTGNRSAATNTGNRSAATNTGDWSAATNTGNQSVATNTGDWSAATNTGNQSVATNTGDQSAATNTGNQSAATNTGDWSAATNTGDWSAATNTGYRSAATNTGYRSAATNTGNQSAATNTGKWSAATNTGNQSVATNTGDQSAATNKGDWSAATNTGDWSAATNTGDWSATTNTGNQSVATNTGDWSAATNTGNRSAAEVSGKQSIAVALGWQSKAKASINGAIVCVYRNHDGELIHIKASKVGENNIKADTWYTLDGFGEFVEVKDD*	phrogs_hmm	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0056	cloud	direct	high	1265	0.999	GCA_003494635.1_00360
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	352616	353512	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	38811	39707	GCA_003494635_1_1_352	GCA_003494635_1_1_352	+	634654	.	PRK00321	recombination associated protein; Reviewed	MYWFRNAIVYQLTKQIDFESIEKQLKECEFTPCGSADVSHFGWSAPLATSENLAHQANGKILLVAKREEKILPVEVVNRELNKRITALEEKEQRKLKKVERSSLKDDVIATMLPQAFSRIKTTALYIDTLKQLIFVDAASSKTAEDALALLRKSLGSLPVVPLAFNCAPCEVMTKWITDTAPDWLILREEVEIREKEDLGVIHCKQKAVEDDEIIELVQNGLVSKLALEWENNLKFILVEDGTLKRLKFDDNIIEKNDDIVKEDLTARFDADFVLMASVLGKTMDSLIKEFGGLKDRL*	mmseqs_cdd	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0057	cloud	direct	high	896	0.999	GCA_003494635.1_00361
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	353509	353754	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	39704	39949	GCA_003494635_1_1_353	GCA_003494635_1_1_353	+	634654	.	.	hypothetical protein	MRLLKRIAENILMDDLRRLDKQIDKSIEQHELDLRKLGELIESLKAENNQLKRENAKLETELRVIKQERLVNVKRKVNKNE*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0058	cloud	direct	high	245	0.996	GCA_003494635.1_00362
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	353747	354106	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	39942	40301	GCA_003494635_1_1_354	GCA_003494635_1_1_354	+	634654	.	.	hypothetical protein	MNEINIKIPLHKLQDLMISHVRYSLPRHTYIVSETIHDVKTYWSVLSSNTREVITRDINEHLKRWENDRNNSFHKLDYDSWEELFDWINENRSSTSTTGTTAKPLVPVLPVIDLKQRER*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0059	cloud	direct	high	359	0.997	GCA_003494635.1_00363
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	354103	354903	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	40298	41098	GCA_003494635_1_1_355	GCA_003494635_1_1_355	+	634654	.	PDB:4U7P_B	Adenine-specific-DNA-methyltransferase	MIVWALFDSGNGCYTQGAELFNQLVNQSVKIYPIGIDIECKNNHFINLNLADYGRMFGDNKLFDELDKLPKPDLIIASPPCESWSVASAMWGGNASWKQETGAVNRELSKFTVRSRADYDLPHFQFKYDRSFLNRINGELCIYNTIEIIKRYQPKVYVIGNPTSSKIWHYVNDILNFQIPFDNLAHYNLYNYPLRKPTRFKSNINLGLRNNHKSKPQQQWEDFSKSYNERSNIPLELIVDIYKAVNQYLTNPIGVPVSAFFLGERK*	common_virus_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0060	cloud	direct	high	800	0.999	GCA_003494635.1_00364
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	354900	355106	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	41095	41301	GCA_003494635_1_1_356	GCA_003494635_1_1_356	+	634654	.	.	hypothetical protein	MKEFNLDAALNGEPVKLRNGNKAFICYKLSDDYKYWDGSPINFNICGYILNFNGDIAMLNTAWTTGGK*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0061	cloud	direct	high	206	0.995	GCA_003494635.1_00365
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	355146	355358	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	41341	41553	GCA_003494635_1_1_357	GCA_003494635_1_1_357	+	634654	.	.	hypothetical protein	MWEDSKIGIEDLPNPFRPEIGDEFFYLRVGTVQCCSFYSDLNADLMRNGQCFRTAEDAQKWLDFMKSMME*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0062	cloud	direct	high	212	0.995	GCA_003494635.1_00366
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	355361	355483	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	41556	41678	GCA_003494635_1_1_358	GCA_003494635_1_1_358	+	634654	.	.	hypothetical protein	MDKFIDWLVYVLTGAFIIVVAGAGIGLFLGVAWKIIRLVV*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0063	cloud	direct	high	122	0.992	GCA_003494635.1_00367
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	355485	355667	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	41680	41862	GCA_003494635_1_1_359	GCA_003494635_1_1_359	+	634654	.	pfam04448	Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	MSEWIKCNDRMPPMVDETSILVLVWGDGFDTPEIDSFDPNEGWSYWGVTHWQQLPQPPEE*	mmseqs_cdd	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0064	cloud	direct	high	182	0.995	GCA_003494635.1_00368
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	355671	356108	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	41866	42303	GCA_003494635_1_1_360	GCA_003494635_1_1_360	+	634654	.	.	hypothetical protein	MPNWCVGDLKIRGETDDITRFLTECIEGCEFKFDEFGTLEIKNIRGQAIKGARRVFCDNPNEIIEGYELENGYIVVVPISAAWVLSPPEMIELSKKFNVDFRFYGFEWGQAFNQELEIIKGVLTLDKCIEFKNYIWECPKPYLGG*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0065	cloud	direct	high	437	0.998	GCA_003494635.1_00369
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	356253	356450	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	42448	42645	GCA_003494635_1_1_361	GCA_003494635_1_1_361	+	634654	.	.	hypothetical protein	MEFKFKQTEETTYSTDPWYDLTSGGYIKPSELLADAEQIKQVEQAIQIVYEFLEQAESNGVLEVG*	.	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0066	cloud	direct	high	197	0.995	GCA_003494635.1_00370
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	356507	356722	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	42702	42917	GCA_003494635_1_1_362	GCA_003494635_1_1_362	+	634654	.	PFAM:PF11112.7	excisionase	MENIMIIPAKTMPIVTYCKVFGLTAEQINMRLNRGIWQKGVHVLSVDGSKERFIDLEEVDKWARKNKIHVA*	phrogs_hmm	hypothetical_protein	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0067	cloud	direct	high	215	0.995	GCA_003494635.1_00371
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	356689	357834	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	42884	44029	GCA_003494635_1_1_363	GCA_003494635_1_1_363	+	634654	.	PDB:1Z19_B	Integrase	MGAKKQNPRGVTIRKHKASETINITFTFKGVRCREPLSLPVTQSNINYAGRLLGEIQNKIERNTFNYADYFPTSSRLRIFGKLVEGVTIKHYLDEYIETAKVRRLSPSTIAGYQKVINELSDFHKVAVNSLTPAMIKNWIKQQRTKTKTIRNKLSVLRSAIDEAVTDGILQINPVSQISVDRYKSTNKTASQDDEYEVDPFTPQEIELILDNCRFEQWRNLFKFALRTGLRSSELCALRWIDIDFKEKTAHVQKAKVVGVIKGTKTKSGTRLIELDDVAIDALQDQLNFTRKSDFVFSDPKTKKPWASADAIRKKAWIPTITQAGIRYRNPYQTRHTFATMHISQGKNLFWLANQMGHKGPEMLFRHYGRYLKEYEGNTRK*	common_virus_hmm	common_virus	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0068	cloud	direct	high	1145	0.999	GCA_003494635.1_00372
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	CDS	357999	359012	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	44194	45207	GCA_003494635_1_1_364	GCA_003494635_1_1_364	-	634654	.	TIGR02124	hydrogenase expression/formation protein HypE. This family contains HypE (or HupE), a protein required for expression of catalytically active hydrogenase in many systems. It appears to be an accessory protein involved in maturation rather than a regulatory protein involved in expression. HypE shows considerable homology to the thiamine-monophosphate kinase ThiL (TIGR01379) and other enzymes.	MSEFITMAHGNGGAAMQKLIQDYFVEAFANPILAQGEDQARIPLTELAKQGETLSFSTDSFVIDPIFFPGGNIGKLAVCGTANDVAVCGAIPKYLSCGFILEEGLPLEDLKAIIQSMAETAKAAGIQVVTGDTKVVQKGAVDKIFINTSGIGVIPQNLDWGVHKIQAGDKIIVSGTIGDHGATILNLREKLGIQTDLHSDCAVLYPLIENLREVDGVKAVRDATRGGVNAVLHEFAQAQQLGMNIDEQALPIRQEVRGICELLGLEALNFANEGKLVIVASAEKIPEILTALRRHPLGENAAMIGEVTTDKKVRLVGIFGQSRLLDLPTNEPLPRIC*	mmseqs_cdd	nonviral_gene	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_CDS_0069	persistent	direct	high	1013	0.999	GCA_003494635.1_00373
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	tRNA	346862	346938	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	33057	33133	tRNA-Arg	tRNA-Arg	+	634654	.	tRNAscan-SE score: 58.2	Arg	NA	tRNAscan-SE	.	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote	cenote	tRNA	337864	337934	GCA_003494635.1	QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635.1_QQHN01000001.1	GCA_003494635.1|QQHN01000001.1	GCA_003494635_1_1	GCA_003494635_1_1@C21	24059	24129	tRNA-Trp	tRNA-Trp	-	634654	.	tRNAscan-SE score: 45.9	Trp	NA	tRNAscan-SE	.	C21	45207	313806	359013	GCA_003494635.1|QQHN01000001.1@region_313807_359013@tool_cenote_tRNA_0001	.	.	.	.	.	.