core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	131766	132314	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	1	549	GCA_003603405_1_5_130	GCA_003603405_1_5_130	-	216764	.	cd22242	Anti-CRISPR type II subtype A6. AcrIIA6 is an anti-CRISPR (Acr) protein which was discovered via a self-targeting method that inhibits the type II-A CRISPR-Cas system (Csy). It is the largest known type II-A Acr, and it contains a helix-turn-helix (HTH) motif that is part of its dimerization interface. AcrIIA6 inhibits target DNA binding to Cas9 via an allosteric mechanism and can induce Cas9 dimerization. The protospacer adjacent motif (PAM) and AcrIIA6 recognition sites are structurally close and allosterically linked. AcrIIA6 affects Cas9 conformational dynamics associated with PAM binding. Almost all type II Acrs characterized to date directly interact with the Cas9 endonuclease, although by distinct mechanisms. The type II CRISPR/Cas subtype has a distinct crRNA-guided surveillance complex encoded by cas9 (formerly csn1), cas1, cas2, and csn2 (for type IIA) or cas4 (for type IIB) genes, all located in a single transcriptional unit directly upstream of the CRISPR locus. Cleavage of the DNA target in type II systems is carried out by Cas9 which is an RNA-guided double-stranded DNase with two independent nuclease domains, HNH and RuvC. Due to the reliance of the type II system on a single protein for function, Cas9 homologs derived from different subtypes and species have been utilized for numerous gene editing applications. CRISPR-Cas immune systems are used by certain prokaryotes and archaea to resist the invasion of foreign nucleic acids such as phages or plasmids. Anti-CRISPRs are small proteins which are the natural inhibitors for CRISPR-Cas systems; encoded on bacterial and archaeal viruses, they allow the virus to evade host CRISPR-Cas systems. The CRISPR-Cas-mediated adaptive immune response can be divided into three steps, including the acquisition of spacer derived from invading nucleic acids, crRNA processing, and target degradation. Theoretically, Acr proteins could suppress any step to disrupt the CRISPR-Cas system. Acr proteins are diverse with no common sequence or structural motif, and they inhibit a wide range of CRISPR-Cas systems with various inhibition mechanisms. CRISPR-Cas systems are divided into two classes (1 and 2) and six types (class 1: types I, III and IV; class 2: types II, V and VI). Acr families are named for their type and subtype which are numbered sequentially as they are discovered.	MEINNDIKGLILEYVGRYFRYENDFYRLPNIKFTDANWQKFKNGETSIEKMGASRVNAMLDCLFDDFELAMIGKAQDYYYFSNSLKMNMTFHAYYDQFKKQQLLKWIENSHDDIIGGTGRMYTASGNWIANAYLEVALESSKVEDSYMLQLRFKNYSQDPRPIPSGRQNRLEWIEKNLENIR*	mmseqs_cdd	nonviral_gene	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0001	cloud	direct	high	548	0.998	GCA_003603405.1_01756
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	132342	132686	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	577	921	GCA_003603405_1_5_131	GCA_003603405_1_5_131	-	216764	.	.	hypothetical protein	MKSQVMSLAWKIFKNEKNDVTFSTALKLAWKTVKRQYMADDFYFFRSSNVKFQGVKKWFAEKEFYGRNKKDLAFMSVTAISVKDLVEETEKAVKLEIVTPYGTSTKWYPKSVLA*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0002	cloud	direct	high	344	0.997	GCA_003603405.1_01757
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	132858	133742	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	1093	1977	GCA_003603405_1_5_132	GCA_003603405_1_5_132	-	216764	.	.	hypothetical protein	MEKLKEAIKLIGHDVGVLQDRQASNLTQTKAYELFPTYATLQSQMTNNIKEKHLELGLDALIDDKLKNGGDPFVTRSKIPVVDTSQLATKNDLEELKRKVGTGGSGTGTELKGQGFPYNLNADIGTVYTDTTAKNGAVKWIKKTAGTGSNAWSVLFGDVKHKPRISSSQNNAYVEFRRINSTVEVGFGGLSWGWFGIVRRGAPSYVPQGSDRERNVVILNVGGIPVGFRATSSKLGIMTNDKGKRLGTFYLGGPGDGNQLRLQFDDPVPTDRDIGDLRFTNMSYTTDDPWPETL*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0003	cloud	direct	high	884	0.999	GCA_003603405.1_01758
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	133754	134101	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	1989	2336	GCA_003603405_1_5_133	GCA_003603405_1_5_133	-	216764	.	PFAM:PF12789.6	tail-fiber-protein	MTLNTEKLTKFAQAVGTDIKDIKTQLANKAEKSEVGQGGITQEQLNTAIQGVKTAILGEGVPEELDTLKEIADKIKAGENPDSAIVSKMTELGEKFTTLENTDFVQIYNSAKNTL*	phrogs_hmm	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0004	cloud	direct	high	347	0.997	GCA_003603405.1_01759
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	134114	134578	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	2349	2813	GCA_003603405_1_5_134	GCA_003603405_1_5_134	-	216764	.	PFAM:PF14606.5	neck-protein	MRLNSTNLKQVGGGKIVKQGDSASLFEYKLLDEDHKPVEELNGTDAKITLYNASGKVSIDTSVTNSGITFKLAKPLPIGLYTVEVVAGGYVFPSDRRTTLEVTQSADEYTSSELLDLVKNDVKAEIDKYIAEHPNGPQTEELPDLTTLYNLAKI*	phrogs_hmm	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0005	cloud	direct	high	464	0.998	GCA_003603405.1_01760
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	134595	135350	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	2830	3585	GCA_003603405_1_5_135	GCA_003603405_1_5_135	-	216764	.	PDB:4OLS_C	Endolysin	MATLNDILGYAESLANQGIGTDADGAYGTQCVDLPNSISTNFFGKALWGNAIDLLNSARDLGYEVEYNQEGNVNSRPRAGAVFVQETIYLFGHPYGHTGLVIEDSDGYTMRTIEQNIDGNADSLYVGGPARYNTRDFTAIVGWFYFPVDGQPAQVEAITPSEPLTVRSSEFNPEEGTFTVEVSALNVRASAGLLGEIVAVYTAGQVINYDGWLDNDGYIWITYIGASGNRRYVAVGQSQNGKRITDFGSFA*	common_virus_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0006	cloud	direct	high	755	0.999	GCA_003603405.1_01761
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	135414	135692	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	3649	3927	GCA_003603405_1_5_136	GCA_003603405_1_5_136	-	216764	.	PFAM:PF04531.12	Phage_holin_1	MNKINWSVRFKNRAFVTRFALALVLPILAYFGIKFEDLTSWGAVFALLGKFVSNPYLVGLTVFNALNIVPDPTTAGLGDSTRALGYEEPSQD*	common_virus_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0007	cloud	direct	high	278	0.996	GCA_003603405.1_01762
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	135694	136110	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	3929	4345	GCA_003603405_1_5_137	GCA_003603405_1_5_137	-	216764	.	.	hypothetical protein	MTFSDLIAHLAPTFGVIATGWFGMKASKSANLNKEQFNELKDELGTIHRTVETVKSVGEDNNRKIDEVNDKLVVHDEAHLVTMYLRLERDITTAIDRGYTTVHESDIIHKMHKSYKKLGGNGYIDALYNKYNNLEVRK*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0008	cloud	direct	high	416	0.998	GCA_003603405.1_01763
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	136126	136731	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	4361	4966	GCA_003603405_1_5_138	GCA_003603405_1_5_138	-	216764	.	PF07104.11	Protein of unknown function (DUF1366)	MTFKVVNKYLQEAGKTFVAIRQDAPYTAFDRVLIGDRTNESDDSLIQAVLGQIATEFNPAEGVKKLQEDLHVQAESYEQKLAEKDTKIAEVKAVADWAVLARVTDTDNPLDPTIYKRGLELVDLGQSGKTYKSQEIFTIEDATHSAQYGEGNRVMVQVNSDFTYNGETLDQLASLEQNGKLAVWKWTKPKENTDLETQPLA*	hhsuite_tools	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0009	cloud	direct	high	605	0.998	GCA_003603405.1_01764
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	136737	136952	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	4972	5187	GCA_003603405_1_5_139	GCA_003603405_1_5_139	-	216764	.	.	hypothetical protein	MNTTDRIINDVAVQLANKVIECANYKALYEEVQEQLEQVQARLNEVSQTLEADEALKELFDEVAQTQHKGE*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0010	cloud	direct	high	215	0.995	GCA_003603405.1_01765
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	136963	140202	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	5198	8437	GCA_003603405_1_5_140	GCA_003603405_1_5_140	-	216764	.	PDB:3GS9_A	tail-protein	MRPILFNKNETAFDTYGLGELNVTKGTVTRERNGNYTLYAEIPVNDPMVSILQKEMKLKADAGLRTKNQTFEISRIVKDSSNIVKIYGQHISHKLEYMAIRNGTILNGTALNALSIWRGALIGDYRFDVWSDIWTDATTKLSIDKVTNARLALGGVEGSILDIWGGEYEFDNMTVRLHKQLGRTAPTVLEYGRNILSAETDETIEDAYTSVLPFATYTPEKPEGDTSDSQPDPITVTIPENYVDSKYKALYAHRRIKVIDFSSEFSTDSKKKNIPTADKLRKLASDYMERNAIGKPKINTKIEYVDLAKTLDYADRAWIEELELCDIVPIYYPQIGLTDETAKVTTITYDFVNERNASVEFGEIGTNVRATMQSGLAGKVDEIAKAQQSFENSLPNYLLNAQGNKVWYNHPDDTIEHKVGDIWFEKNGLYDRMYIWNGSMWEKRIDTEDVDKVKKEVDKQLEEANKLTAIEIEKANAKAQEALVKAGTIPDASKLSEQIKTLILNSPDLNQKVTETLNQTDSGVIYNKILQNVKNEFVEQKDIGPVLAGINQKISKQTVEFQKLTESNKLYERIIGTSETDAPDKLSRLVMSSDIFQTEVGKYVTDDNNLIVNSMTMDKNTLVGNSNPNASVSVSDGIFTIKAQGLTGYNWSGFTLPIYVKKIYHGETYTLGFKYRIREYPDVSFAFNVKNHGLNKTLTWANIGEDRPALNEWHEFQKTFTIQEDFTFGEDANYPFYIFLAKNGWIEFKEPILVRGSNTGPYKPSQFDDVFADNNAVRTQVSQLAGSWAVRNLNSNGDVLNSINVLANGTNRIDGRLTHITGQTKIDNAVIKDGMIANLNADKITGGTIDASQINVINVNASNVLAGTLTGMTVRGGRVESLNGKMNIDLQNGQYNVLNNEATIRRIDETSSSQFISLKKSGFIAEQFRDSNAALMVFGTNHNKDPKEVERHDNDTFAGIRVWSGKGNGKEESLTEFIGDRVLIYNNGRNRSPWNFHGNTNDGNTYLLPMNQNNVKHYIGRGDFFLEGIYSKHFYMRGGVDVAEYLWDLLTCLGMLKRHGTISGASNHIQGVLDKYGFK*	hallmark_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0011	cloud	direct	high	3239	1.0	GCA_003603405.1_01766
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	140199	140912	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	8434	9147	GCA_003603405_1_5_141	GCA_003603405_1_5_141	-	216764	.	PDB:2X8K_A	Distal-Tail-Protein	MSTFNFNGTDSSKYGLRVTSDYVINSTGQDISTVSVAGRDGDLLLSNNRLKSVTLELPCTISSNLKLSDIEGDISNWLNVEGYKDMTLSWDKDFIYRSAYLESFEIASIMRQFGKVKLNFLTYPVKFYKQGRATQTLSNGATINGLGNVNAKPIITLVGSGDCTLTINGRKTKLRDVQGKITLDMQANQVFKDRLPAWDKVVRSPQFQMPYLDAGRNLISWDGNFEVFMIPNWGVKL*	hallmark_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0012	cloud	direct	high	713	0.999	GCA_003603405.1_01767
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	140912	144547	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	9147	12782	GCA_003603405_1_5_142	GCA_003603405_1_5_142	-	216764	.	Uniprot:T2PM72_GARVA	tail-tape-measure-protein-	MADGKIVIDVQVNGNKLSALASDLKKLESDATRSSNGFKSASQTLQNAGNQASKAGEGFKKAGDDAGKGGEKAKQATSGFDRLKESIKNFSVGAIAFKAVNAGLDLITSSLDKAIDRFDTMQRFPKVMQSLGHSSKDVAQSTKELSNGIEGLPTTLDTVVATTQKLTSMTGDLKTSTKLTIALNNAFLASGASTEDASRGLQQYTQMLSAGKVDMQSWKTLQETMPYALQKTAESFGFAGASAQKDFYAALQSGQITFQDFSKRLIELNKGTNGFAEMARKNSEGIRTSFGNIVNAVAKGIANVIDAFDKLSKAVTGKSIAQNLDSIKAVVNSVFKFIVDAINGATPILKGFVQALGHLKPILDPLLGALGGAVVAILAFKGAMLGLAIIKGIGGLIGNLVTSLTTLASTSIVAQGATVGLSGALATLSSGGVLMVIGALVGLATALSQDSEAMKEAKARSEEYQQSIKNLNDSVKTGNESYEDRRREIKATAEDNERLVKKIEELSAVENKTAAQKKELASSAEILNSRIDGLNIAYDKATGTINMTADAIRKQIEISKQSAEAEAANQRLVEIAKQRLEVDDKIADAKKRQKEELEKLDNTEGKYGTSILSNAQKEEYRNKINEETEKTIKSLQESKESLADSEQRATDIIASANEAQAKAVEDASGRMKLSWDTMDEDQRKLVEDMKAQYEALRGDVQNAFQAIEQQTALSAEQMTANLQQNIDAVDKWSQNLEILAQRGLDQGLIEQMRQAGPKMAEQTQALVNASDEQLGALNGKWTEAGDKAKEGFLRGIRATGVELAPEVQAMVTAIGDEFRSALAEAGFDVKAREIPKQTADGIRAGKEDVAQASSEMTEASKQAFNNLPTEAKYSGSQVSGNYAQGISESSPLVQTASDFIKSTAIGAMSTLAGEGQTAGSNFGGGISTGINSSQGSVTGASLGMTLAAAGQMISMSIKGMTAGQQFGGGISLGIGLKQGQVSSSSRGLQSSAKQSIASLGSDGRSAGGQFGGGLASGISSRGGSVAGASSSLKHTANAHLQGGFGGAYSAGLSIGEGLSAGIYAMAGSVASAAASIASAAVGAARSALRINSPSKVFRDQIGRAIPEGMAIGIEKFSYYVDDSMTGLSKDVIDAGKALADRVSFTPESALGLTGSISPSFGASNVSNSSVTNNYTLNANGTANDNFFIPENMRRLLREMAYYTNLEGGKMA*	hallmark_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0013	cloud	direct	high	3635	1.0	GCA_003603405.1_01768
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	144548	145111	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	12783	13346	GCA_003603405_1_5_143	GCA_003603405_1_5_143	-	216764	.	pfam06854	Bacteriophage Gp15 protein. This family consists of bacteriophage Gp15 proteins and related bacterial sequences. The function of this family is unknown	MKLNEPLLNSFELDGIEYDIDCSFDTVLDVFEVFADDLLNELEKFQVAVQIMTGQHITDALTFLTVWEYIDEHFIKTRKEKPVLDRNGNPMPVPKEEIDKVRLLDIEEDASDIYASFRMAYGINLFEEQGKMTWQEFSALLNGMPDNTPVARLIQIRDWKPKPHDPAEYKANMRKLQNKYRLDREEE*	mmseqs_cdd	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0014	cloud	direct	high	563	0.998	GCA_003603405.1_01769
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	145121	145591	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	13356	13826	GCA_003603405_1_5_144	GCA_003603405_1_5_144	-	216764	.	PF10666.9	Phage tail assembly chaperone protein Gp14 ()A118	MTININIERSGFSVKIGEFEFWFDTSNEAMQHFINIDQIVNDRYNAYLAEISERSAKGEFDDAKKGEITEEVIGQAIELERKQVEIKYDALFGDGTFAKLYEKYPDYLALDDALNQADILIGEELKKITEERANKVNERTSQYLQKAEKKKRKTKK*	hhsuite_tools	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0015	cloud	direct	high	470	0.998	GCA_003603405.1_01770
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	145657	146109	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	13892	14344	GCA_003603405_1_5_145	GCA_003603405_1_5_145	-	216764	.	PFAM:PF08813.10	tail-tube-protein	MARFKNALRGHFIAPVTDPKQKPEKSAYLELAKWIEDVTDDTDEATTSVAYYDGDGTEETTVTSVKGSYTFKGTYDKEDPAMKHIAGLKYKLGNDRLVWHKVVDADNKNETVGIATVSDIKAGSGAAADYEEFGCKISYNTLPETTAVVG*	hallmark_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0016	cloud	direct	high	452	0.998	GCA_003603405.1_01771
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	146128	146538	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	14363	14773	GCA_003603405_1_5_146	GCA_003603405_1_5_146	-	216764	.	PFAM:PF12691.6	Minor-capsid-protein	MTKNIGKNDFLEQLNSFINTLNLPIPCRMDYLDEDESLVCYPLAGGKVNTLYMDEAKDVTLPFEIAIKTKSHNKANTCIWAINEALSDFSLELPSKNGSYEFDNLTVTMPFLNDRDDQGYYIYLQDIQANITVFSK*	hallmark_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0017	cloud	direct	high	410	0.998	GCA_003603405.1_01772
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	146535	146885	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	14770	15120	GCA_003603405_1_5_147	GCA_003603405_1_5_147	-	216764	.	PFAM:PF11114.7	Minor-capsid-protein	MGITIKVDLSGIEKKISGANVKKAEYAIATQAALDMEQFVPFRDGNLVGSRYVSGNKVIYNIVYARAQFYGGAYNKKRSWHWSKGKKAGTGPRWDKKASAIYGSDWARKGKEAMGL*	hallmark_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0018	cloud	direct	high	350	0.997	GCA_003603405.1_01773
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	146885	147232	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	15120	15467	GCA_003603405_1_5_148	GCA_003603405_1_5_148	-	216764	.	PFAM:PF10665.8	Minor-capsid-protein	MIDKRMLVDEAIIKKRVGMDEWGAELFSEDLYIKPCRFDQSTNHVQSQKSGASKNRTVNYIGVLYIDTDYCNVEIDPSYIDGQLIVDGQAYIISRIIPNRHPLNKRILTYEIEVI*	hallmark_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0019	cloud	direct	high	347	0.997	GCA_003603405.1_01774
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	147222	147611	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	15457	15846	GCA_003603405_1_5_149	GCA_003603405_1_5_149	-	216764	.	CDD:cd08053	Head-Tail-Connector-Protein	MAYLSYDEYLDLGFDVTDRFDELYKRAEMTVNLYIRNFYAYREFDSDFEPRKQAVKNAVANQINYLERTGIMSAEEKQSLSSVTVGRTTVSYQNSTQTATAGKRYNLSLDAENWLNMAGFNYSGVCYDR*	hallmark_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0020	cloud	direct	high	389	0.997	GCA_003603405.1_01775
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	147643	147846	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	15878	16081	GCA_003603405_1_5_150	GCA_003603405_1_5_150	-	216764	.	.	hypothetical protein	MAKFKATSNVVFTGDELDQSFIEGEIYDLPVKTADDLNKRGALSHPEASPFLVRVDNNEEETEEVEA*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0021	cloud	direct	high	203	0.995	GCA_003603405.1_01776
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	148026	148895	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	16261	17130	GCA_003603405_1_5_151	GCA_003603405_1_5_151	-	216764	.	Uniprot:U6ETE7_LACLL	Major-Capsid-protein	MSTKLYTKQYMTMLAKITETRSRFLRSFGGQIQIFDGVSDSDTMLHLKVNNTKAVVKKYDKGENVAFGTGTGSSNRFGQRTEIKSIDKTVPYEAPISIHEGIDNVTVNDVADKVVAERLEENALAQTEYINELLAKALSENASETINGQLTEEGVTKVFSTAHKKFVNNKISKNIAWVAYVTSDVYDFLIDSKLATTAKNSSANIDDQTMYKFKGFVLEETPDEYFQTGEQVMFAADGVGIAGVGLQIVRTIDADDFYGVAIQGAGKYGKYIADENKVGILKAKLVPGG*	hallmark_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0022	cloud	direct	high	869	0.999	GCA_003603405.1_01777
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	148919	149482	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	17154	17717	GCA_003603405_1_5_152	GCA_003603405_1_5_152	-	216764	.	PFAM:PF06810.10	minor-structural-protein	MSLKREMLVEAGIEDKAVIDNIMQAYGAGIENAKTQAKSELQAENETLKGQLEQQSQAIKDLQAKEGASEESKQQLADLQAQFEQYKLDSEANLAQVTKTNAVALALKDVGAFNSNDLMKFIDLDKIELDEAGKPLLDDTINGLRETSPYLFQAQEPQPQPNITVGGNPTAGSDKQGDAFDEILSKY*	hallmark_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0023	cloud	direct	high	563	0.998	GCA_003603405.1_01778
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	149686	149877	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	17921	18112	GCA_003603405_1_5_153	GCA_003603405_1_5_153	-	216764	.	.	hypothetical protein	MNKRIKKKGTMNFLIDQNNQLWNIVERLEKVVSHNVQATNERLDKVNKDLETIKKHKKSWFAK*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0024	cloud	direct	high	191	0.995	GCA_003603405.1_01779
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	149861	151084	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	18096	19319	GCA_003603405_1_5_154	GCA_003603405_1_5_154	-	216764	.	PFAM:PF06152.10	minor-capsid-protein	MKTSANRKIKLNDQQLTLDASQVSELYHKLTLELFDQVVDRLLERGSVSLAENPYIWQLEKMNQMGLLNADNVKLIAEYSGIAEKQLRSVIEGEGYKVYKTTRDQLAETLGADDLDDNLEIQNNLAGYANQALTDVHNLINTTLPESVRSVFQSVIEESVGKVVTGITTPERALNDTIMKWFDKGFYGFTDSQGKQWKADSYARTVIRSTVKRAFREMRTAPAKEFDIDTFYFSKKATAREACAPLQHQIVTYGPQREEDGITILSMADHGYGTPAGCLGINCGHDITPFVVGFNELPDLGPDVKDISPSEAIANANAQAKQRALERKIRRSKEFLHVAKKLGDKDLIDKYKSQIRNQQGAMRSYLAGKPFLHRDYSREKYYSNPISEAKTETILKRKLGGSDEQAN*	hallmark_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0025	cloud	direct	high	1223	0.999	GCA_003603405.1_01780
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	151087	152547	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	19322	20782	GCA_003603405_1_5_155	GCA_003603405_1_5_155	-	216764	.	PFAM:PF05133.13	Portal-protein	MTTENLTKITDHPKIAVSEDEYNRIRENLNYFAGRFNKVVYKDSNGTVCKRDFNHLPLARTASKKIASLVFNEQAEIKVDDEKANEFIQEQFKNDRFLKNFERYLESCLALGGLAMRPYIDKDKVRISFVQAPVFLPLQSNTQDISSAAIVTKTIKAEGKKQKYYTLIELHEWKKDGHYTITNELYKSDNQKIVGSRVPLSEIYEDLEETVEVKNLSRPLFTYLKPSGMNNKDINSPLGLSIFDNAKTTIDFINTTYDEFMWEVKMGQRRVLVPAQLVKTEFDQRGDKVTVRREFEAGQNVYQQLDGGGIDNPVSITDLTTPIRSDDYIKAINEGLALFEMQIGVSAGMFSFDGKSMKTATEIVSENSDTYQMRNSIVSLVEHSLKELIVSMLELAKAYKLYNGNIPDMEDISINLDDGVFTDRNAELDYWIKVVTAGFGTHAMAIEKVLNVTPEEAMKIESEVHGHTLDEANSERDQTDIDIYGE*	hallmark_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0026	cloud	direct	high	1460	0.999	GCA_003603405.1_01781
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	152614	153921	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	20849	22156	GCA_003603405_1_5_156	GCA_003603405_1_5_156	-	216764	.	PDB:5OEA_B	Large-Terminase	MKVNIQSNVNPHFKSVWTTSKPYNVLKGGRNSFKSSVIALLLVYMMIPFLIAGKKANVVVIRKVGNTIRDSVFLKIQWALNKFGLSGRFKATVSPFKIQDTVTGSCFYFYGQDDFQKLKSNDIGNIIAVWYEEAAEFSNKEDFDQSNVTFMRQKHPDISFVKFFWSYNPPRNPYSWINEWAEELKDNDSYLVHSSSYLDDRLGFVTEQMLEDIERIKENDYDYYRYIYLGEPVGLGTNVYNMALFKEADKVPDNERVIGQFFAVDSGHQQSATTCLHLVLTNANNVYLIDNYYYSPAGKTHKKAPSILSKELHDFVEAQAKQFPNVPILNMTIDSAEGALRNQYYEDFGERWHPVAKKKKIVMTEYVQSLLAEGRFFYLPTENNIKYFIEEHKKYQWEEKSIMNDDPKVIKEEDHTCDALQYFVLDNAQMLDLKA*	hallmark_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0027	cloud	direct	high	1307	0.999	GCA_003603405.1_01782
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	153911	154228	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	22146	22463	GCA_003603405_1_5_157	GCA_003603405_1_5_157	-	216764	.	PFAM:PF03592.15	Terminase-small-subunit	MAELQAKNIMSAEEALSILSDIARGKRDEEVLLMNPATGEVQRLTKKADNATVIKAIQEILKRYPTTKQAEKLELEIEKLRTQMEQGTVSDVNITIIDEWSKDES*	hallmark_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0028	cloud	direct	high	317	0.997	GCA_003603405.1_01783
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	154606	155055	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	22841	23290	GCA_003603405_1_5_158	GCA_003603405_1_5_158	-	216764	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MFFSELLKNKTKENAKRTLKTYRNYLRIAGEEYSPKVTATYSLEPKSAPSSPSRQTENMVLRRVSAQQELEHIADAINRLSDANLSQILVERYCRLRFKQDKEIYPALGYSSSEYYRLLDQALYEFAEAYKGGELLAFNLGDIQEICGS*	mmseqs_cdd	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0029	cloud	direct	high	449	0.998	GCA_003603405.1_01784
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	155065	155427	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	23300	23662	GCA_003603405_1_5_159	GCA_003603405_1_5_159	-	216764	.	.	hypothetical protein	MESEALELFYKEVMRVKEEKGRLANWFKCKCPDYAENQFYASKRKNKIPSVAIVLQFEGYIEPAILYNLLKIKQVSNGNHERMIEEFFNRHSEEIMNDPTYKLRKQYKRIRLQQQLLDTL*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0030	cloud	direct	high	362	0.997	GCA_003603405.1_01785
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	155851	156030	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	24086	24265	GCA_003603405_1_5_160	GCA_003603405_1_5_160	-	216764	.	.	hypothetical protein	MNLEELVTTRNKYQRKLEDKNAYRELCETVGKNNATANREWLRRKIKDLDRQIEELSGL*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0031	cloud	direct	high	179	0.994	GCA_003603405.1_01786
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	156027	156215	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	24262	24450	GCA_003603405_1_5_161	GCA_003603405_1_5_161	-	216764	.	.	hypothetical protein	MEIGNREYNAITESTLDLEVLVGQNVLKALATIVFDGAKKVVIPIKLKNGMSYKVTVKEDAE*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0032	cloud	direct	high	188	0.995	GCA_003603405.1_01787
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	156215	156601	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	24450	24836	GCA_003603405_1_5_162	GCA_003603405_1_5_162	-	216764	.	TIGR01671	phage uncharacterized protein TIGR01671. This model represents an uncharacterized, well-conserved family of proteins found in bacteriophage and prophage regions of Gram-positive bacteria. [Mobile and extrachromosomal element functions, Prophage functions, Hypothetical proteins, Conserved]	MIPKFRAWLKQYNVMVDDVSDLTFFEGNLKFIGRRTVGGVSFQYSVEEIELMQSTGVLDKDGQEIFEGDIVKMAKDVYSDLTYYEIIRHRGGAYRLESNQHGCELWLRHTNCEVIGNIYENTGLLEVE*	mmseqs_cdd	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0033	cloud	direct	high	386	0.997	GCA_003603405.1_01788
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	156585	156863	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	24820	25098	GCA_003603405_1_5_163	GCA_003603405_1_5_163	-	216764	.	.	hypothetical protein	MIIKDYKYENSIDGIHYIIDVDGYEFEMNHTKTGYGSVQHDDIYYFLDEIAEYDVQEVELIEDFVRFQNYLLMYGVGFALKNAEEVQDDSKI*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0034	cloud	direct	high	278	0.996	GCA_003603405.1_01789
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	156853	157071	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	25088	25306	GCA_003603405_1_5_164	GCA_003603405_1_5_164	-	216764	.	.	hypothetical protein	MSDSVFIDAFTRYGWVEECIDIDEVAYVDFVKGVICLKAHDAQIPRMIPTTLGTLYNVEKVLIRNRGRSDDY*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0035	cloud	direct	high	218	0.995	GCA_003603405.1_01790
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	157061	157309	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	25296	25544	GCA_003603405_1_5_165	GCA_003603405_1_5_165	-	216764	.	.	hypothetical protein	MNLRQKRKHYLYSFRFFMAWFNKHDENFSLSCNKKYRKALKQKLRVKEEYDYDKCCRKYWFCDEYCGDMPKFMREKGRKNER*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0036	cloud	direct	high	248	0.996	GCA_003603405.1_01791
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	157306	157890	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	25541	26125	GCA_003603405_1_5_166	GCA_003603405_1_5_166	-	216764	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MNKQELIEHISNTLDECLRNTIYTLPIFSITESAKSNEVSLELKTERGSIVLDRVPQKLVVPQFVADWYEKNKDDFENALFQSIDLMPSIYEEKELSEFEEWLVDEHTKPFQILVNMHQFGYEVEKEKRYLVKMKGITSSARYLKHNIKTDNWFFSGREEAFSYRAKHTRKELEDAGFGWVFNCEGIEIAEVEE*	mmseqs_cdd	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0037	cloud	direct	high	584	0.998	GCA_003603405.1_01792
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	157883	158155	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	26118	26390	GCA_003603405_1_5_167	GCA_003603405_1_5_167	-	216764	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MKKNNIFIYLCLFCLLYLIAEQADKIKSLEARRPEIIYKVDNAGSGLAGIVTGKEFDGNRYSITVSGYGKFLVNKEQYDRAIIGKGWQHE*	mmseqs_cdd	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0038	cloud	direct	high	272	0.996	GCA_003603405.1_01793
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	158255	158536	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	26490	26771	GCA_003603405_1_5_168	GCA_003603405_1_5_168	-	216764	.	.	hypothetical protein	MSLNKTRKRLIKKCRKLYNSYPIGLKFSADGGKTFIALGNIVETYIPNTKNIASGSINTSKLSSDRFGLKEFEVTLKQDFSKEEMKKFKGILW*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0039	cloud	direct	high	281	0.996	GCA_003603405.1_01794
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	158537	158938	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	26772	27173	GCA_003603405_1_5_169	GCA_003603405_1_5_169	-	216764	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MKEPIILTFELSRKQMISANDRLHFQQKAKITRFLRELAKYEGQNTLKDWYGLPFSEDKPCKVRVVIFSPTMRKYDPPNWSPTSKALLDGLTDAEFWTDDNYNIIKEVSFLHGGKSGTDNYKIKLEIMETGDE*	common_virus_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0040	cloud	direct	high	401	0.998	GCA_003603405.1_01795
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	158947	159123	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	27182	27358	GCA_003603405_1_5_170	GCA_003603405_1_5_170	-	216764	.	PFAM:PF04936.11	host-nuclease-inhibitor	MKSKVYALYKGDELLEIGTKKELAEKFGVKPKTIAFYNTPSYTKRTSHNKGRRLVALD*	phrogs_hmm	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0041	.	unmatched_CDS	none	0	0	.
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	159243	159560	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	27478	27795	GCA_003603405_1_5_171	GCA_003603405_1_5_171	-	216764	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MLNSIVLVGRLTKDPELRYTPNNQAVATFSLAVNRNFKSQNGEREADFINCVIWRQQAENLANWAKKGALIGIIGRIQTRNYENQQGQRVYVTEVVADSFQLLES*	common_virus_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0042	persistent	direct	high	317	0.997	GCA_003603405.1_01796
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	159576	160223	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	27811	28458	GCA_003603405_1_5_172	GCA_003603405_1_5_172	-	216764	.	CDD:cd05398	Nucleotidyltransferase	MVFKIADTYNYRQLWWLDKLLIGHKGYIAGGCFKNIFNNERVKDVDIFFENKADCLEAISYYKKEMKEHPSDWRFVYENEKVWSVYSNKEKVRLELVKSTFGKPKQVISEFDFTITKFAYYKNYDNVDEENYMAVFEIIFHEDFFEHLHTKRLVIDDEMIYPVSTFNRVMRYARYGYQPCRETKIKIVTNLAMLDPKNQKDFEKELGKSLYDGLD*	common_virus_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0043	cloud	direct	high	647	0.998	GCA_003603405.1_01797
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	160227	160880	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	28462	29115	GCA_003603405_1_5_173	GCA_003603405_1_5_173	-	216764	.	pfam04404	ERF superfamily. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to ERF.	MVEKKQSIFEKLANIQNELKAPKNQYNSFGKYNYRNAEDIEEALKPICLKYRATCLISEVTTEELASELITKVTVSLMDWDSENMVTVIGRAREERTKKGMDASQVSGGAQSYATKYALSQMFLIDDSKDADTDADYIQSGRANQKQAPAKKKDEPVISIEKANYYLKEIAIIAEAKGKEDGSIARWFLQHLNVADYKQIKQSQVEQAEMLLGKLKG*	mmseqs_cdd	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0044	cloud	direct	high	653	0.998	GCA_003603405.1_01798
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	160891	161364	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	29126	29599	GCA_003603405_1_5_174	GCA_003603405_1_5_174	-	216764	.	PFAM:PF05565.10	resistance-protein	MATLYELTGIYQQIYDMDMDDETKLDTLESIDWTEDYENKVEGYVKVMKNLDADIEARKNEIDRLKKLNDADKSKKERMKTDLATSMELTGHEKVDTTLFKVSFRKSEAVEVDDFLLPEAYKLATWKADKKRLKEDLKNGLEILGAELVERKNLSIR*	common_virus_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0045	cloud	direct	high	473	0.998	GCA_003603405.1_01799
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	161348	161485	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	29583	29720	GCA_003603405_1_5_175	GCA_003603405_1_5_175	-	216764	.	.	hypothetical protein	MMFDYDTWLSTPPKAYQEPYEDEDAIYDQWVEDEILKGEYNGNTI*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0046	cloud	direct	high	137	0.993	GCA_003603405.1_01800
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	161482	161673	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	29717	29908	GCA_003603405_1_5_176	GCA_003603405_1_5_176	-	216764	.	.	hypothetical protein	MFFRKSRLIKEQAEEIAHLKRINEHHNLINRWNIDTIKEARKKIKKMDELLELYKSVIYRENE*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0047	cloud	direct	high	191	0.995	GCA_003603405.1_01801
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	161663	161809	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	29898	30044	GCA_003603405_1_5_177	GCA_003603405_1_5_177	-	216764	.	.	hypothetical protein	MTIEAMHEAIKTYLTDAQATRLERLKMASRLKYETEVFKLHEELNDVF*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0048	cloud	direct	high	146	0.993	GCA_003603405.1_01802
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	161820	162071	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	30055	30306	GCA_003603405_1_5_178	GCA_003603405_1_5_178	-	216764	.	.	hypothetical protein	MLEPSLTSQLLGAGLIAVSFFVAGFVTCYLDVKKKEKEQRKQAKINELLEIQKGYEQEIKSSVWDDLAEYRKYSVSDNDFKTC*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0049	cloud	direct	high	251	0.996	GCA_003603405.1_01803
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	162073	162216	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	30308	30451	GCA_003603405_1_5_179	GCA_003603405_1_5_179	-	216764	.	.	hypothetical protein	MEKSKNQWKPRIINVMTDGSQLEDLTGYIIPKDSGYYNAIRRINKEI*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0050	cloud	direct	high	143	0.993	GCA_003603405.1_01804
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	162265	162606	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	30500	30841	GCA_003603405_1_5_180	GCA_003603405_1_5_180	-	216764	.	.	hypothetical protein	MTISRDMTTLEANVFSQILSGTCEEPIPAHRIRGRFGVSKRQLENIVESLRVNFRVPIVAKKFNPNGYYIPRNEEERSEGLGPYKRQILTEQKNLSIIQSIDLEDFWKNKKAL*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0051	cloud	direct	high	341	0.997	GCA_003603405.1_01805
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	162753	163547	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	30988	31782	GCA_003603405_1_5_181	GCA_003603405_1_5_181	-	216764	.	PDB:4M4W_K	Replicative-helicase	MDLPLVYHINEQETCDIHQCFKWSLNDDIPLKEERNRTFCPECQREKMEKEEKQKIGQAEIATTLRTTYDVLDKNSIIPSGLKKANFKNFTVSNEIDQQARNYALRLVSHYLHDGKGNALIMGKAGRGKSHLAMAVASKLNADWKANSLPKSILFINLPALFIKIQNSFNRKEGMTSNEWLELLKKVDYLVLDDLGRSDNAQWKQDFLYSLLDEREATIITTNLVGSEMKSLFETGLVSRITKGGRDLYFKYPDNAEDRRKLPF*	rep_hall_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0052	cloud	direct	high	794	0.999	GCA_003603405.1_01806
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	163551	164381	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	31786	32616	GCA_003603405_1_5_182	GCA_003603405_1_5_182	-	216764	.	PFAM:PF09681.9	replisome-organiser	MVDIAFSNKRYYWLQLKEDFFKSKEMKLMRKLPGGEEITIIYLKIMLVSLGDEGKIYFEGLAEDLAEELSLLIDEDPEAIRMALMFLTKKKLLTTSDNYQFNLEQVPEMIGSETASARRVRKHRENHKALQCNTEVTKCNGDIDIEIDKDIEIDNNNRFSLSPSLANNLKQSGVRLTEKQHQQLLDYVGLDGMTFEMLNRAIDLTSETHQPSFKYLKAILENWKKEGFTSLEEVEEHEKKRQVKQNKTEYTGTYPIKNPVFSPYTDKLPWEEDEEE*	rep_hall_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0053	cloud	direct	high	830	0.999	GCA_003603405.1_01807
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	164414	164629	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	32649	32864	GCA_003603405_1_5_183	GCA_003603405_1_5_183	-	216764	.	PFAM:PF10078.8	transcriptional-repressor	MVNVSKLKGKIVEENTTQEELASKIGITKSTFYRKMKQNGNFSIKEVNLIVSALNLSKDEAMAIFFSETVA*	phrogs_hmm	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0054	cloud	direct	high	215	0.995	GCA_003603405.1_01808
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	164794	165159	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	33029	33394	GCA_003603405_1_5_184	GCA_003603405_1_5_184	+	216764	.	PDB:1PRA_A	Repressor-protein	MNVGERIKLRRKELKISADTLAERVGVSRSTIFRYEKGDIEKVGPEVLKKISETLNISPADLMGWEDEAKSEIGSSSSSDYSETDLRKMAENAKTFDGKPLNENDIQAIQNIIEIYLQGRL*	common_virus_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0055	cloud	direct	high	365	0.997	GCA_003603405.1_01809
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	165156	165533	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	33391	33768	GCA_003603405_1_5_185	GCA_003603405_1_5_185	+	216764	.	PDB:3DTE_A	IrrE-protein	MSIEEICDLHGVRIAYFDKELWHRHGIYVDEIKIVFVNKALSSDAQKRVILHELGHLNHTEANYANNPIKCENEANRAMIHELLREELNQIDKEDFNYLNFMERHKLKSVTDELMVIDEFYRLVG*	common_virus_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0056	cloud	direct	high	377	0.997	GCA_003603405.1_01810
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	165548	166087	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	33783	34322	GCA_003603405_1_5_186	GCA_003603405_1_5_186	+	216764	.	.	hypothetical protein	MKKVTFMAIAALTLLIAGCGQQEADTDQGQEETTEQVTTESSSEESKKEKAWELVDKAKAKSKQENQGEEQYRKATGIVSGNRPLLDQFANSYKQWLDSSQIEVYYRSDRVAVLLPVTSSELTNDQLHQTADGLLKIKNDVEKTYKITDKDFTAPPVYVHDTNEVQLAHEENGVMIYDK*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0057	cloud	direct	high	539	0.998	GCA_003603405.1_01811
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	166220	167656	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	34455	35891	GCA_003603405_1_5_187	GCA_003603405_1_5_187	+	216764	.	PDB:4BQQ_A	Integrase	MNKVAVYVRVSTTSQLEEGYSIEEQKAKLESYCDIKDWNIYKIYTDGGFSGSTTDRPALEQLVQDAQSKLFDTVLVYKLDRLSRSQKDTLYLIEDIFLKNDIEFVSLLENFDTSTPFGRAVIGLLSVFAQLEREQIKERMQLGKLGRAKSGKSMMWAKTSYGYDYDKETGSMTVNEFEALAVKEIYASYLSGISITKLRDKMNAEYPKKPAWSYRTIRGILANPVYCGLNQYKGQTFQGTHKAIISLDDFEETQRELKKRQQTAQERLNPRPFQAKYMLSGLAQCGYCHAPLKVVLGQKRKDGTRTKRYECYQRHPRTTRGVTVYNDNKKCNSGYYYMDILEHYVLTRIAMLQNDPDKIQEIFSGGTSPVIDKQAIQKQIDSLSLKLSKLNDLYLDDRITLDELRSKSSDFIKQRAILEEEIKKASTDKQVGRRKKIEKLLDASSVFEMSYDNQKVIVRELIEKVQVTSDKIVIRWKI*	common_virus_hmm	common_virus	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0058	cloud	direct	high	1436	0.999	GCA_003603405.1_01812
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	167619	167723	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	35854	35958	GCA_003603405_1_5_188	GCA_003603405_1_5_188	-	216764	.	.	hypothetical protein	MKSLRTLKVKAFTLIEMNVTKFIKFSSGSLSCQT*	.	hypothetical_protein	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0059	cloud	direct	high	104	0.99	GCA_003603405.1_01813
GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote	cenote	CDS	167720	168595	GCA_003603405.1	QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405.1_QTND01000004.1	GCA_003603405.1|QTND01000004.1	GCA_003603405_1_5	GCA_003603405_1_5@C11	35955	36830	GCA_003603405_1_5_189	GCA_003603405_1_5_189	-	216764	.	3JC9_Cb	PilA, PilC, PilN, PilO, PilM	MVEADFVERMQVGLANGKPLSAILSDLGFSDQVTTQLALAEQHGNVTLSLEKIRSYLENLTQVRKKLVEVATYPVLLLGFLMFIMLGLKNYLLPQLESQNGATRLISVFPQYVLLGSVLLAIGVLILLFLGRRAKRLALVSFLATLPFLRPFLQDYLTAFYAREWGSMIAQGLELNQIFPMMQGQRSRLFREIGQDLEVALARGTSFSDHIQTYPFFKRELALMIEYGEAKSKLGSELEIYADKTWAGFFHRLNKAMNVVQPLVFVFVALMIVLLYAAMLLPIYENLEVPL*	hhsuite_tools	nonviral_gene	C11	36830	131766	168596	GCA_003603405.1|QTND01000004.1@region_131767_168596@tool_cenote_CDS_0060	persistent	direct	moderate	849	0.969	GCA_003603405.1_01814