core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	339546	339998	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	1	453	GCA_003691635_1_1_341	GCA_003691635_1_1_341	+	1843353	.	TIGR02805	tonB-system energizer ExbB, group 2. Members of this protein family appear to be the ExbB protein of an ExbBD proton-transporting membrane complex that, by means of TonB, energizes transport by TonB-dependent receptors. Note that this family represents one of at least two distinct groups TolQ homologs designated ExbB - see also TIGR02797. Each group associates with a distinct group of ExbD proteins, and a single species may have two ExbB/ExbD/TonB systems. [Transport and binding proteins, Cations and iron carrying compounds]	MVQLFDFLQQYSDYFIIGLLLLMSIIMLAMVIERYLFLRKVSVAHYSTIHALDIDLNRNMTVISTIGANAPYVGLLGTVIGILLTFYQIGHGGGDIDPSVIMLHLSLALKATALGILVAIPSMVFYNGLGRKVEVNRLKWKVLSEQKDKE*	mmseqs_cdd	nonviral_gene	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0001	persistent	direct	high	452	0.998	GCA_003691635.1_00357
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	340002	340445	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	457	900	GCA_003691635_1_1_342	GCA_003691635_1_1_342	+	1843353	.	TIGR02804	TonB system transport protein ExbD, group 2. Members of this family are Gram-negative bacterial inner membrane proteins, generally designated ExbD, related to the TolR family modeled by TIGRFAMs TIGR02801. Members always are encoded next to a protein designated ExbB (TIGR02797), related to the TolQ family modeled by TIGRFAMs TIGR02796. ExbD and ExbB together form a proton channel through which they can harness the proton-motive force to energize TonB, which in turn energizes TonB-dependent receptors in the outer membrane. TonB-dependent receptors with known specificity tend to import siderophores or vitamin B12. A TonB system and Tol-Pal system often will co-exist in a single bacterial genome.	MKKFDEINIIPFIDIMLVLLTVVLITASFISQGKIQVNVPKASTAVAFKSDELAKLLTVTADKQLYFNDKPISQEALEAEIAQWNKDQKVTLKIDAEASFQDFVTITDMLSKNEIKNVAIVSMKDKGKSAGENSQESTPSQSVPTTP*	mmseqs_cdd	nonviral_gene	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0002	persistent	direct	high	443	0.998	GCA_003691635.1_00358
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	340455	341249	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	910	1704	GCA_003691635_1_1_343	GCA_003691635_1_1_343	+	1843353	.	4G7X_B	Putative uncharacterized protein, TolA protein	MQQTKRSLLGLLISLIAHGIVIGFILWNWNEPSDSANSAQGDISTSISMELLQGMVLEEPAPEPEDVQKEPEPEPENVQKEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKKKPKKEVKPQKKPINKELPKGDENIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAAYRSAIRREIESHKRYPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGDESLDKAALDAINVSRSVGTRPAGFPSSLSVQISFTLQ*	hhsuite_tools	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0003	persistent	direct	high	794	0.999	GCA_003691635.1_00359
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	341427	341933	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	1882	2388	GCA_003691635_1_1_344	GCA_003691635_1_1_344	-	1843353	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MAGINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERREVTEWHRIVFYRRQAEICGEYLRKGSQVYVEGRLKTRKWQDQNGQDRYTTEIQGDVMQMLGGRNQNAGGFSNEMGSSPQPSYQARQTNNGNSYQSSRPAPQQAAPQAEPPMDGFDDDIPF*	common_virus_hmm	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0004	persistent	direct	high	506	0.998	GCA_003691635.1_00360
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	342087	344918	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	2542	5373	GCA_003691635_1_1_345	GCA_003691635_1_1_345	+	1843353	.	PFAM:PF02463.18	RecF-protein	MENIDIRGARTHNLKNINLTIPRNKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDSIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPCCPDHDVPLTAQTISQMVDKVLSLPEDSKMMLLAPVVKNRKGEHVKILENIAAQGYIRARIDGEICDLSDPPKLALQKKHTIEVVVDRFKVRSDLATRLAESFETALELSGGTAIVAEMDNPKAEELVFSANFACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVQQYFDEDRVVQNPTISLAGGAVKGWDRRNFYYYQMLTSLAKHYHFDVEAPYESLPKKIQHIIMHGSGKEEIEFQYMNDRGDVVIRKHPFEGILNNMARRYKETESMSVREELAKNISNRPCIDCGGSRLRPEARNVYIGKTNLPIIAEKSIGETLEFFTALSLTGQKAQIAEKILKEIRERLQFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTVIVVEHDEDAIRAADHIIDIGPGAGVHGGQVIAQGNADEIMLNPNSITGKFLSGADKIEIPKKRTALDKKKWLKLKGASGNNLRNVNLDIPVGLFTCVTGVSGSGKSTLINDTLFPLAQNALNRAEKTDYAPYQSIEGLEHFDKVIDINQSPIGRTPRSNPATYTGLFTPIRELFAGVPEARARGYNPGRFSFNVRGGRCEACQGDGVLKVEMHFLPDVYVPCDQCKGKRYNRETLEIRYKGKTIHQVLDMTVEEAREFFDAIPMIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKLATELSKRDTGKTLYILDEPTTGLHFADIKQLLEVLHRLRNQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGQIIATGTPEQVAKVESSHTARFLKPILEKP*	common_virus_hmm	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0005	persistent	direct	high	2831	1.0	GCA_003691635.1_00361
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	345237	349409	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	5692	9864	GCA_003691635_1_1_346	GCA_003691635_1_1_346	+	1843353	.	pfam02395	Immunoglobulin A1 protease. This family consists of immunoglobulin A1 protease proteins. The immunoglobulin A1 protease cleaves immunoglobulin IgA and is found in pathogenic bacteria such as Neisseria gonorrhoeae. Not all of the members of this family are IgA proteases, EspP from E. coli O157:H7 cleaves human coagulation factor V and hbp is a hemoglobin protease from E. coli EB1.	MKKTVFRLNFLTACISLGIVSQAWAGHTYFGIDYQYYRDFAENKGKFSVGAKNIEVYNKEGQLVGTSMTKAPMIDFSVVSRNGVAALVGDQYIVSVAHNGGYNSVDFGAEGPNPDQHRFTYQIVKRNNYKPDKDNPYHGDYHMPRLHKFVTDAEPAKMTDSMNGKNYADLSKYPDRVRIGTGEQWWRTDEEQKQGSKSSWLADAYLWRIAGNTHSQSGAGKGTVNLSGDITKPNNYGPLPTGVSFGDSGSPMFIYDAIKQKWLINGVLQTGNPFSGAGNGFQLIRKNWFYDNVFAEDLPITFLEPRSNGHYSFTSNNNGTGTVTQTNEKVSMPQFKVRTVQLFNGALKEKDKEPVYAAGGVNAYKPRLNNGKSIYFGDRGTGTLTIENNINQGAGGLYFEGNFTVSSENNATWQGAGVHVGEDSTVTWKVNGVENDRLSKIGKGTLHVKAKGENKGSISVGDGKVILDQQADDQGKKQAFSEIGLVSGRGTVQLNDDKQFDTDKFYFGFRGGRLDLNGHSLTFKRIQNTDEGAMIVNHNTTQVANITITGNESITAPSNKNNINKLDYSKEIAYNGWFGETDENKHNGRLNLIYKPTTEDRTLLLSGGTNLKGNITQEGGTLVFSGRPTPHAYNHLNRPNELGRPQGEVVIDDDWINRTFKAENFQIKGGSAVVSRNVSSIEGNWTVSNNANATFGVVPNQQNTICTRSDWTGLTTCKTVNLTDKKVIDSIPTTQINGSINLTDNATVNINGLAKLNGNVTLINHSRFTLSNNATQIGNIKLSNHANATVDNATLNGNVHLTDSAQFSLKNSHFSHQIQGDKDTTVTLENATWTMPSDTTLQNLTLNNSTVTLNSAYSASSNNAPRRRSLETETTPTSAEHRFNTLTVNGKLSGQGTFQFTSSLFGYKSDKLKLSNDAEGTYKLAVSNTGKEPKTLGQLTLVESKDNKPLSDKLKFTLENDHVDAGALRYELVKNNGEFRLHNPIKEQELRNDLVRAEQAEQTSKAKVRLRRAVLSDPLPDQSLLNALEAKQVEQTAETQTSKPKTKKVRSKRALREAFSDTPLDLSLLNALVEVKLEAINVQQQVGKERQTQEEQEKIQRKQKELISRYSNSALSELSATVNSMLSVQDELDRLFVDQAQSALWTNIAQDKRRYDSDAFRAYQQKTNLRQIGVQKALDNGRIGAVFSHSRSDNTFDEQVKNHATLTMMSGFAQYQWGDLQFGVNVGAGISASKMAEEQSRKIHRKAINYGVNASYQFRLGQLGIQPYFGVNRYFIERENYQSEEVKVQTPSLVFNRYNAGIRVDYTFTLTDNISVKPYFFVNYVDVSNANVQTTVNSTMLQQSFGRYWQKEVGLKAEILHFQLSAFISKSQGSQLGKQQNVGVKLGYRW*	mmseqs_cdd	nonviral_gene	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0006	shell	direct	high	4172	1.0	GCA_003691635.1_00362
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	349662	349805	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	10117	10260	GCA_003691635_1_1_347	GCA_003691635_1_1_347	+	1843353	.	.	hypothetical protein	MQFKLILSIVHKINLPILTLLYNSFYYQGIVQIHRKDLLGLFIFKNL*	.	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0007	cloud	ambiguous	low	3	0.021	GCA_003691635.1_00363
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	349802	350308	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	10257	10763	GCA_003691635_1_1_348	GCA_003691635_1_1_348	-	1843353	.	pfam02316	Mu DNA-binding domain. This family consists of MuA-transposase and repressor protein CI. These proteins contain homologous DNA-binding domains at their N-termini which compete for the same DNA site within the Mu bacteriophage genome.	MVFKMIREWYEIKNLLEVAGLATTVQGVTKKAKKENWQRRRVVGVKGNIFEYYVGDMPLAVQKALGFKPNEAKKEPLPAARVGERLKEIGRIMATISSLEAKVKELEEPTLDSLPDTLDQAEKRLVRWFRQCNKDRQAMLLSSAEVLADMSLKEQKESSEPLENCEVA*	mmseqs_cdd	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0008	cloud	direct	high	506	0.998	GCA_003691635.1_00363
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	350699	352579	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	11154	13034	GCA_003691635_1_1_349	GCA_003691635_1_1_349	+	1843353	.	PDB:1BCO_A	Mu-Transposase	MWIELKEILGLGGLPATLPGITKKAKLENWERRRKQGVKGNVYEYSFSSLPLEVQTEYLLKHSEELKVNKENNDSNQQTMIESAWNVLASATFEQEKRAERRFQAVVKVARLVENKIPLMKAFEQVVALYATDSDDETISKGSLKRGWYKVKTHPQGIWLPLLLDRTERDNSCRWADISDKAWAFFYADYLRKSKPKFSVCYYRLTLAAEENDWTIPSLSSLKRKFYNEFTEAEIALARGGEHELRELTAPQIRTVMDLEVYEIVNGDGYQHNVFVDWYEDGRPPIRPKTILMDNTRAASDKQTTQQRKRGKRQTAGIKIDGMFDRLGIKVIRTLVFKGRGNGRAKPIERAFKRDSLPAYVDGDARLEAFFTGWSVTEKTEDYQFKKGVNKALFLEVLEQGVRLWNDKAGRETELGQGIFSADQLWARDYAQTRQTFATEEQLRQLMMLGESTKVDKHGRFTLKAGYVLNNQKNVYEAQALIGGNIGNVIVRYDPDDLHGTVHIYDKNGVYLCDGECVEKVAFNSEEGARVQKRLINEQRRITKKMVDNHEKLSEHEMAQYRKQFEQSAADFVEPAEKQAFSWTQFADGNTVKTIKLDHELETETEEQNTLSFEQDLFNGLKQVQK*	common_virus_hmm	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0009	shell	direct	high	1880	0.999	GCA_003691635.1_00364
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	352606	353523	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	13061	13978	GCA_003691635_1_1_350	GCA_003691635_1_1_350	+	1843353	.	COG2842	Bacteriophage DNA transposition protein, AAA+ family ATPase  [Mobilome: prophages, transposons]. 	MTLTQQIQQILDSKTFMQRDIAQQSGISAGALSAYLKGTYAGNIDNIESALNNWLASQDKKQKVFVDAPHFIDIPTAKRVFGALDMAKLLPTMVTIYGASGVGKTKASQEYKKLNKNVWMITASPARATLSTILYELALELGINDAPRRKDRLSRMITKKLSGTQGLVIIDESDHLPYDALEEIRIIQEEADVGFALIGNDKVYTRIQGGVNQAHEYARLWSRIGNNCGIKHSTKADVKAVAQAWNLDTEDKELMNTLCDIGTKAGGLRALTQYLRLAAIAAKGKETVISLDLILQAKAHMQGVN*	mmseqs_cdd	nonviral_gene	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0010	shell	direct	high	917	0.999	GCA_003691635.1_00365
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	353523	353723	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	13978	14178	GCA_003691635_1_1_351	GCA_003691635_1_1_351	+	1843353	.	.	hypothetical protein	MKKYLLTLSLILTACTDVETCNLQCQKRANAEWKQEQGEFQPNLTPEQERYIVEWLVEHYPNGTQP*	.	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0011	shell	direct	high	200	0.995	GCA_003691635.1_00366
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	353745	354032	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	14200	14487	GCA_003691635_1_1_352	GCA_003691635_1_1_352	+	1843353	.	PFAM:PF07352.11	Mu-Gam-like-end-protection	MAKKATRIKTDTFAVRYQTRDEVEVAIKEIGDLNRELERLAIEQNDKLAAITEEYVPLMNAIKEKLSPKQDAVQAWCESRRDELTQNGKTAKRQN*	phrogs_hmm	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0012	shell	direct	high	287	0.997	GCA_003691635.1_00367
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	353989	354279	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	14444	14734	GCA_003691635_1_1_353	GCA_003691635_1_1_353	+	1843353	.	COG4396	Mu-like prophage host-nuclease inhibitor protein Gam  [Mobilome: prophages, transposons]. 	MNSRKTAKRQNGKTKTGSFNTGEVQWRQRPPSVGIRGAESVLESLRTLGLVRFIRTKEEVNKEAMLNEPELAATVAGVTIKTGVEDFVITPLEQEI*	mmseqs_cdd	nonviral_gene	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0013	shell	direct	high	290	0.997	GCA_003691635.1_00368
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	354375	354644	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	14830	15099	GCA_003691635_1_1_354	GCA_003691635_1_1_354	+	1843353	.	COG4382	Mu-like prophage protein gp16  [Mobilome: prophages, transposons]. 	MRSTKEKAIQLIHIAKHKLRMDELSYRMLLNELTGKNSTKQMTIMQLIKVLEAMENKVFKKTTKRHHSPTTENAKVNSLIAHKICSIWI*	mmseqs_cdd	nonviral_gene	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0014	shell	direct	high	269	0.996	GCA_003691635.1_00369
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	354645	354833	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	15100	15288	GCA_003691635_1_1_355	GCA_003691635_1_1_355	+	1843353	.	.	hypothetical protein	MSKQGLVRDGSENALNVWVRGVVNPILTAQNKPLALNVGALNDQMAGLVLERLKKWQARGNV*	.	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0015	cloud	direct	high	188	0.995	GCA_003691635.1_00370
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	354830	355366	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	15285	15821	GCA_003691635_1_1_356	GCA_003691635_1_1_356	+	1843353	.	.	hypothetical protein	MKLCRCPVCHSDIHLDQLEDDAGRELLGLITELKYGVARPLVSYIALFRPDKSALSNSRAIKLMREVLAMFPASQLSAHSLSETVNAVQKKRKESRNLAPLNNHRYLMQVMETNKPLFSGVGSAAINNEERKQAERLAENDEIENTILYIERFHQLGQPVEHLPGYEVWKKWKENQSK*	.	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0016	cloud	direct	high	536	0.998	GCA_003691635.1_00371
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	355493	355756	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	15948	16211	GCA_003691635_1_1_357	GCA_003691635_1_1_357	+	1843353	.	pfam08765	Mor transcription activator family. Mor (Middle operon regulator) is a sequence specific DNA binding protein. It mediates transcription activation through its interactions with the C-terminal domains of the alpha and sigma subunits of bacterial RNA polymerase. The N terminal region of Mor is the dimerization region, and the C terminal contains a helix-turn-helix motif which binds DNA.	MIVQTVEVAMLNATTEQIETFNEKAPEILADLAKHTEVKIKERIADIDPALAQQISVEVASQIAQSWGGEVIYIPPQSRVITKRTRP*	mmseqs_cdd	nonviral_gene	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0017	cloud	direct	moderate	236	0.894	GCA_003691635.1_00372
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	356038	356394	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	16493	16849	GCA_003691635_1_1_358	GCA_003691635_1_1_358	+	1843353	.	PFAM:PF10078.8	transcriptional-regulator	MKRTNFGEFIRGYRRTNKILLKQMADALGFSSAFLSSVENGNKPIPQGIEQKLVSNFNFSDEDKNSLFESIDTTRTQSTINIPQNTLDQMLIGAFCRNFNELDDTKKQELLNLLKGVK*	phrogs_hmm	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0018	cloud	direct	high	356	0.997	GCA_003691635.1_00373
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	356394	356927	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	16849	17382	GCA_003691635_1_1_359	GCA_003691635_1_1_359	+	1843353	.	PDB:3DTE_A	IrrE-protein	MSSIFYNDGFSVSPMSKKQIDSITQAIREIAAKCGWVDSNGAVDIVSLLEFGYEKFRIIPDHEMAGALGLTLPTGEILLRESVYNGACYGNGRDRFTVAHELAHGVLHKEQIGFARPVDHNTKIYCNAEWQANEFAGRLLLPDSCIKQHSGRSISEIAGLFQISYECAEIRISKYRK*	common_virus_hmm	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0019	cloud	direct	high	533	0.998	GCA_003691635.1_00374
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	357126	357266	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	17581	17721	GCA_003691635_1_1_360	GCA_003691635_1_1_360	+	1843353	.	.	hypothetical protein	MAMTTCSKCGRVCPLIFRWTREDPRTGAIIRAKHRPMPIPQCDCGR*	.	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0020	cloud	direct	high	140	0.993	GCA_003691635.1_00375
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	357353	357538	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	17808	17993	GCA_003691635_1_1_361	GCA_003691635_1_1_361	+	1843353	.	.	hypothetical protein	MIDEDILNIARKAWKKKDYNAARDFYQQVAYGYNYFTEPEKEAFTKEVSIFAVKTLRIRRF*	.	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0021	cloud	direct	high	185	0.995	GCA_003691635.1_00376
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	357559	357915	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	18014	18370	GCA_003691635_1_1_362	GCA_003691635_1_1_362	+	1843353	.	.	hypothetical protein	MLEKESLLQSKLTNIVKQDHGERGAELLRYVLYYADYRGEIIRKKAGRSYILELPKTLSFTENTSKSEPIEDSEKPLSIIQALKTGINKAKNEPTKPSDIIGLIIFLAIIWAVYKIFS*	.	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0022	cloud	direct	high	356	0.997	GCA_003691635.1_00377
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	357999	358550	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	18454	19005	GCA_003691635_1_1_363	GCA_003691635_1_1_363	+	1843353	.	PDB:1M0D_D	endodeoxyribonuclease-I	MSLSLPINKIVIHCSATKNGKSLRTTTQIAAQCIDEWHKQRGFKRSPVLAKQFNPHLQHLGYHYVIDTDGTVETGRMVGEIGAHVKGHNQYSVGICLVGGIDANGKNYGEYTEKQWIALHTLLQKLESEYPSARICGHRDLSSDINGDGSITPNEWIKDCPCFDVWTWLDSEQVINFDHLFRG*	common_virus_hmm	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0023	cloud	direct	high	551	0.998	GCA_003691635.1_00378
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	358553	358777	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	19008	19232	GCA_003691635_1_1_364	GCA_003691635_1_1_364	+	1843353	.	.	hypothetical protein	MGIALFLALILSLCFATVLIQDLDPLLGGAFLVGVICCLVVVFTMLSIEDTCQTYGKFSVGSTIYQCQQIQEGK*	.	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0024	cloud	ambiguous	low	3	0.013	GCA_003691635.1_00379
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	358774	358914	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	19229	19369	GCA_003691635_1_1_365	GCA_003691635_1_1_365	+	1843353	.	.	hypothetical protein	MSASIKLPRHKKLFTRGHKLSNNAKRNRAINGGRTAAQRFYVSWSY*	.	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0025	cloud	direct	high	140	0.993	GCA_003691635.1_00379
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	358917	359150	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	19372	19605	GCA_003691635_1_1_366	GCA_003691635_1_1_366	+	1843353	.	pfam10841	Protein of unknown function (DUF2644). This family of proteins with unknown function appear to be restricted to Pasteurellaceae.	MFFQLITNADGRLSTTAFIQFFGALLMAGILVFCVWLNRSYVPELFTTFAIFCGGGAATKGFANAMQSRNSQGGNND*	mmseqs_cdd	nonviral_gene	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0026	cloud	direct	high	233	0.996	GCA_003691635.1_00380
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	359143	359394	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	19598	19849	GCA_003691635_1_1_367	GCA_003691635_1_1_367	+	1843353	.	pfam10883	Protein of unknown function (DUF2681). This family of proteins is found in bacteria. Proteins in this family are typically between 81 and 117 amino acids in length.	MINVYIVGAAFAVLAGIFIHGRVQAAKIRKQQEEIEFVKREAAAVAQELENANTAKNITETNRTLSSKSVDEQLQSKGYFRED*	mmseqs_cdd	nonviral_gene	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0027	cloud	direct	high	251	0.996	GCA_003691635.1_00381
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	359560	359835	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	20015	20290	GCA_003691635_1_1_368	GCA_003691635_1_1_368	+	1843353	.	PFAM:PF10828.7	Rz-like-spanin	MAIGGAVWTYFWLTMDSSKTDVSDLRKAIENNEKSLSEVKGELRHLPTSKEVADLRLLMTEMKGKTDVLNTNIGSLNHQVKLLIEKEVNKE*	phrogs_hmm	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0028	cloud	direct	high	275	0.996	GCA_003691635.1_00382
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	359832	360137	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	20287	20592	GCA_003691635_1_1_369	GCA_003691635_1_1_369	+	1843353	.	5X11_E	Transcriptional regulator/DNA Complex	MMRQDIFTKDQRLVILRSLEECGYDANESILNDCLDMYGHDISRDLVRNHLLWLEEQGLITLTRLDNNGKDFFVATITQRGLDVAQGRAFVDGVKKPSPKI*	hhsuite_tools	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0029	cloud	direct	high	305	0.997	GCA_003691635.1_00383
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	360160	360279	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	20615	20734	GCA_003691635_1_1_370	GCA_003691635_1_1_370	+	1843353	.	PFAM:PF11985.7	terminase-small-subunit	MTDKNTRGRASKVDLLPPNIKTQLAMMLRDKQLSQAKIS*	phrogs_hmm	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0030	shell	direct	high	119	0.992	GCA_003691635.1_00384
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	360245	360730	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	20700	21185	GCA_003691635_1_1_371	GCA_003691635_1_1_371	+	1843353	.	pfam11985	Protein of unknown function (DUF3486). This family of proteins is functionally uncharacterized. This protein is found in bacteria and viruses. Proteins in this family are about 190 amino acids in length.	MINSFHKRKSLEEINDLIRDCGLDDSYQLSCTGLNRYASRMEQMASKIRNAREVAEIWTKQFGEAPQSDIGKLLMEIVKNLAFETSIGMSENGKAEPKDLALLSSAIQRLEQAESLSHKREQAIRKEMAQLAAETAEKVVVQAGLSADTVRAIKEQILGIA*	mmseqs_cdd	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0031	cloud	direct	moderate	365	0.751	GCA_003691635.1_00385
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	360730	362283	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	21185	22738	GCA_003691635_1_1_372	GCA_003691635_1_1_372	+	1843353	.	PDB:4IEE_A	Large-Terminase	MALLNNRPLNELAPECQSFLDCIHAFNPNELLLGYQKCWIADDSQLKIAEKTRRCGLTWAEAADNALIASMRKSDGGSDVFYIGSNKEMAREYIDAVAMWAKAFNYAAEEIQEEVFEDEDKDILTYVIYFASGFKVKALSSNPKNLRGMQGIVVIDEAAFHEYLAEVLKAALALTMWGAKVRVISMHNGVDNLFNELILDSSAGRKRYSVHTITIEDACHDGLYQRICQVTKQEWAAEKEQEWIENLLNDTASEEDALEEYFCVPKNGSGLWLSRALIERQMSEKTPVVRFEAKDGFSLVPEPTRYKEMNDWCEKTLAPILQNLSPNLLHFFGEDFARSGDMTSFVILAQQQNLTKQVQFIVELGNMPYKQQEQIVLFILKQLPRFSGGAFDARGNGGYLAESARDAFGSLIDCVQLSEKWYREHTAPFKAALEDGELEAIPKDADILADLRSFQVVKGVPRIPDKRAKSADGKSKRHGDTAIALLLAHYASRQLIQLPVKAHSRKPRASRKMTQGY*	hallmark_hmm	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0032	cloud	direct	high	1553	0.999	GCA_003691635.1_00386
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	362396	363703	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	22851	24158	GCA_003691635_1_1_373	GCA_003691635_1_1_373	+	1843353	.	PDB:5NGD_C	Portal-protein	MGRDISAYREVLSDSHVAGCVRRRKAAIKGLEWRITPTGNEKTDEILTALFERLPLPQIITEMLDAALFGYQVLEVMWENQNGLWLPAEVIGKPQEWFVFDEQNQLMLRDKENRNGKLVPEKKFLLTTQEANYTNPYGKPDLALCFWAATFKRGGFKFWLEFTEKYGSPWLVGKHPRQAQTHEIEDLLDSLEQMIGTAVAAIPDDSSISMLESASKGGSSQVFDEFLKYCKSEIAIALLGQNQTTEQESNRASATAGLEVTKEIRNEDITLVESGFNQLLNWICELNFNVETLPKFELYEQESIDKVQVERDQILSQMGVKFTAQYLHRTYGFEDGDIELTVNNTPKTAEFNEPTLPSNIADGVVEQLEMEGEPYVEDWMQTIKDRLSQAESLEDFRNQLDSLIPELNFAEYGELMAWASTTAFLAGRQSVVEEK*	hallmark_hmm	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0033	shell	direct	high	1307	0.999	GCA_003691635.1_00387
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	363704	364981	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	24159	25436	GCA_003691635_1_1_374	GCA_003691635_1_1_374	+	1843353	.	PFAM:PF04233.13	minor-capsid-component	MSKFTFQAQSRYFEKKLNLKTNSYLDVLGEEHDYFFVVAGANRNEVINAFREAVDQAIHHGETLESFRQRFDEIVEKTGWDYNGGRNWRTRIIYDTNVYGAYNRGRLQQHLDLADVMPYWEYQHNDNSHPRPEHVALDGTIRPATDPFWKYYYPIKAYGCHCTVIAHDEHDLKAMGKQVSPPVEIEYEDKLVGVRSGSPRLVTLPKGYDVGFAPYNFDDLSSSRNVEIDSILFQKLTTAEPRFASLLIQDVMKNTATVALLNHSMKEMVETVSNEKIARGKMKYVGVIHDEVIDKLTAMDKAPQTAVIAVRDEDVLHALRDTKQAKGINLPIEFWEQLPEKLRNPKAILFQPKESFNDKNAKDTLLFIYDTDHGKVAVKMDYEVKLRDQLTSKKFKANLNVVKTASVIDEDLKKLQKFDVLWGEL*	hallmark_hmm	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0034	shell	direct	high	1277	0.999	GCA_003691635.1_00388
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	365168	365356	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	25623	25811	GCA_003691635_1_1_375	GCA_003691635_1_1_375	+	1843353	.	.	hypothetical protein	MTELEERKKALELLPQFQGLTINEIISVLHWLQAYVQDYQRFEISNELVSHQEEIESSHDSV*	.	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0035	shell	direct	high	188	0.995	GCA_003691635.1_00389
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	365298	365495	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	25753	25950	GCA_003691635_1_1_376	GCA_003691635_1_1_376	-	1843353	.	.	hypothetical protein	MSNYEDNLLRNIFVAQVATLAKAIKAEKLAQGTRTTSDCYREAIIEIKRNREKILSLLDEIQAHY*	.	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0036	shell	direct	high	197	0.995	GCA_003691635.1_00390
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	365559	366059	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	26014	26514	GCA_003691635_1_1_377	GCA_003691635_1_1_377	+	1843353	.	PFAM:PF05069.12	virion-morphogenesis-protein	MIKITLNDTQALAKLHSIAQQLQHPRKLYGLLGETLKKIHADRFKAEVAPDGKKWQPLSSITRKIKGNDRILKQGGYLSQKTAYNYDDNRLEFGSDAKYARLHQFGGVIRSKKGKRLKFGKGSNTVYAKQSKIPARPWLGVNAQDEQKLLKKATALLQRQINQNLK*	hallmark_hmm	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0037	shell	direct	high	500	0.998	GCA_003691635.1_00391
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	366302	367405	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	26757	27860	GCA_003691635_1_1_378	GCA_003691635_1_1_378	+	1843353	.	PFAM:PF10123.8	head-maturation-protease	MNLIEIFKAGTRKDANGKEVTLTIEDLQQAVQSYNVEFHEAPAVIGHPQHNHPAYAWVKRLELDGDILKAEFDQIDPEFAEMVDKGRFKKVSASFYLANSQANPKQGSLYLRHVGFLGAMPPAVKGLRNPEFAEDEEGVVDFSDWTEATLWRRLRDWFIGKHGQEEADKVLPDYLVGSVQEEAVRNSLQPQKAESPIFNEPTQQQGEPEMSAEEKAELERLKAENQQLKDEKAQAEAQKAEAQLNQTKAENADFAESLVSVGKLAPVSKEKAIELLNCAAVQSAGGVVEFGEGENILTAIKAFLEAQPQIIQFGEVATKDNATTTEDNTVEYAEGTSAEAIDMDKRVRAYMKEHNVSYVTAFNAIHS*	phrogs_hmm	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0038	shell	direct	high	1103	0.999	GCA_003691635.1_00392
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	367424	368350	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	27879	28805	GCA_003691635_1_1_379	GCA_003691635_1_1_379	+	1843353	.	PFAM:PF03864.14	Major-Capsid-protein	MSDLSKHRVVDPVLTELAQGYYNGNMISEVLFPIAETQKEGGKIPTFGRLAFRLQTTKRELRAASNRLTPEDIGSLTVVLEENDIEYPIDIREVNEVEGVYPLRQYATGVTQDVIVLNREKACADLALNEDNYDASNKITLSGTSQFTDKNSDPISVIKAGIRAIKRATGRKPNICAISGDVWEVLSEHPKVLEKIKYVATAVLTPEDFAKLVKIDKVIIGEAVYEQSSELKDIWSKAIVLAYVAAASKEKKQNIYEPSYGYTVRRKNGLYVDTYTEVGGKVEIVRTTDINKPYIVGKAAGYLIKGCI*	hallmark_hmm	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0039	shell	direct	high	926	0.999	GCA_003691635.1_00393
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	368416	368679	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	28871	29134	GCA_003691635_1_1_380	GCA_003691635_1_1_380	+	1843353	.	.	hypothetical protein	MNKKMLYAVVGTMAILHNGKRYEKGDKIELTAEEAENLSLYIQLDQSELEKQKEERRLAEEKAEQERLAAEKAQKKTEEKTKEKADK*	.	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0040	shell	direct	high	263	0.996	GCA_003691635.1_00394
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	368679	369113	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	29134	29568	GCA_003691635_1_1_381	GCA_003691635_1_1_381	+	1843353	.	CDD:cd08053	head-to-tail-adaptor	MYISAQDLTEVLSERSLIELSNDHSRATEYNPLVLDKACQYATETVDGYLRSRYLLPLKSVPTIVRNICLQLARFWLYSRRPEGTGFPENVKDTYAQALKDLERIQSGKLHLGLEELNENGTNALDDVAKFKTRANKKIDLTGY*	hallmark_hmm	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0041	shell	direct	high	434	0.998	GCA_003691635.1_00395
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	369125	369622	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	29580	30077	GCA_003691635_1_1_382	GCA_003691635_1_1_382	+	1843353	.	PDB:2GJV_C	tail-completion-protein	MSATQPILNSIQTHLLSQIDRFAIELFPDNPSEYFLRDESGAILIQYAGSKFERINSTDIIQQRRTVTIALTVIARSQHNDDGALAILDQVRLAIVGFRPENCLACALINEEFAGEADGLWQYQLLVQTETWQVEQTKAVDLPKLANVYSRKPTDPLNPILQPKS*	hallmark_hmm	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0042	shell	direct	high	497	0.998	GCA_003691635.1_00396
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	369632	371017	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	30087	31472	GCA_003691635_1_1_383	GCA_003691635_1_1_383	+	1843353	.	PDB:3J9Q_Q	tail-sheath-tube	MAFHHGTETKRVTGGSVAVETVDGAIIGIVGTAPIGPLNELTLCQTKKDFAKFGTILNQGFTLPDAFDVIARYAAGQVYVVNVLDVSKHKSEIQDESITLDETTLLANTQKKGLLSLTLKSNSTPLTLNEDYWVDMQTGEIRLKVSKTSLTATYTYADPSKVTEEDIKGGIESSTGKRKGFELLRDGFNLYGADAKILICPEFDKTASCALALGTLAEQLKAVAYVQLPKGTSLSKAIQGRGPQGTINAKDSTERVRHFFPYALGSSNQLESLAVHAAGLRMKVDVEKGYRHSTSNHQLLGVIGMELPLTARIDDIQSETNRLNAVGITTIFNSFGTGFRLWGNRSSNYPTVTHIINFETALRTGDLIDESIRMVELQYIDRPIDDALIDSLTETVDTYLRALPSIVGYSLGLDYDYDLVDAFSKGQVPIKYDYTPKLPAERITNTSVMTRKYLVNLVSQK*	common_virus_hmm	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0043	shell	direct	high	1385	0.999	GCA_003691635.1_00397
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	371028	371546	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	31483	32001	GCA_003691635_1_1_384	GCA_003691635_1_1_384	+	1843353	.	PDB:5W5E_O	major-tail-protein	MSVAINQIINANVYMDGNSLLGKAKEFKLPDIEFEQIEHKGLGLVGTIKLPSGIAALEGEVTWDSFYPEVRAKAYNPMKNVQLMARSNLQVFDARGLVAEEPMVTIMNVSFSKTTGGSLKNKEATEHADTFQVHSIKQTVGGKEIFFYDAFANILRVNGQDVLQKYRTNIGQ*	hallmark_hmm	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0044	shell	direct	high	518	0.998	GCA_003691635.1_00398
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	371641	371916	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	32096	32371	GCA_003691635_1_1_385	GCA_003691635_1_1_385	+	1843353	.	PFAM:PF10109.8	tail-protein	MSLSNQIQIYRSIQLQFPIKDGEGKDITELKIRRAKVADIKQMSNFKGTDADKEIYMLSLLTGLVPEDFDAMDIADYAKVQAALADMQKGK*	phrogs_hmm	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0045	shell	direct	high	275	0.996	GCA_003691635.1_00399
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	371937	372077	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	32392	32532	GCA_003691635_1_1_386	GCA_003691635_1_1_386	+	1843353	.	pfam06528	Phage P2 GpE. This family consists of several phage and bacterial proteins which are closely related to the GpE tail protein from Phage P2.	MVADVAWWFGWNVSEIEQMTLDELSTWLEQANRQIKAGYSKSKATL*	mmseqs_cdd	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0046	.	unmatched_CDS	none	0	0	.
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	372093	372326	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	32548	32781	GCA_003691635_1_1_387	GCA_003691635_1_1_387	-	1843353	.	.	hypothetical protein	MKTTTSFDFLESLIVLSCVVGFGYTLYSFLTFAASQLDFVQIIFAVFIWVIAWQIIGAVLFFAYRLGSGRLFSKANK*	.	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0047	shell	direct	high	233	0.996	GCA_003691635.1_00400
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	372363	374576	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	32818	35031	GCA_003691635_1_1_388	GCA_003691635_1_1_388	+	1843353	.	PFAM:PF10145.8	minor-tail-protein	MSSNLAISLVIGASVGGAIAGIKNLRNSLKLFKDESQSVGSRMLGLGKNVALGTSSLISLGTAATTSMLAIAQPAIKFESAMADVKKVVNFDSPAQFKEMEQDILRLTRTIPMASEEIAAIVAAGGQAGIARENLLGYAEDAAKMGVAFEMAAGDAGTAMATMANVLGKLISEMAKFGDAINHLSDNANAKAADIVNVIARAGSDTRMLGLTENQAAALGSTFLSMGKAPEVAAQAIKGMSSAFAELKAGKHAKELQMLGLTPKSFAKAMNKDAQGAISDFIARIKKLPKDKQYPLLAKMFGKQYADDIMLLAQNTAEYNRQLGLLEERDENGNLKYMGSMQREFENRSATTENNLQLLKNSFNEIGIAIGAKLLPPINLLVNKLKPVIYNILEWMNANPELVNQFVQIGGGLVAIIGGFVALKTVLSLGLMAILPFWSGGKKLFSLFKFLTPVLMKLAYGFGYTFGLIAVGAFLIYEYWEPISAFFSTLWAEVTVIFDNVCQFVTNIWNDVQGIWSAVWDGVTNWFTGLWESINGLFNGNFTELGNIILAFNPLSLFQSIFSSVLNYFSVELPAEFTNFGKNIIDGLVNGIGNAWDSAKETVTELGTSVKNWFAEKLGIHSPSRVFMGFGENTVQGLAIGINKSLGLAEKASDEMSNAVGIFPHSDYQSLQTTFAQQQSEQAQHGGMTIHFNPTINVNGSSNNQVLNDVKEGLNISLREFETMLARVLDQQKRRAY*	hallmark_hmm	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0048	shell	direct	high	2213	1.0	GCA_003691635.1_00401
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	374576	375508	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	35031	35963	GCA_003691635_1_1_389	GCA_003691635_1_1_389	+	1843353	.	PFAM:PF06995.10	tail-protein	MYLMLGTIALEPIDITDFSEIQAARFAEHQVLKGKPRLQAMGESLAELNLSVRLHHKIGGVERRYQALLAAKAKQDALALIWGRGKFKGNFVITDIHSNTLFTDKYGNVLCRELTINLKEYVGELKNNLLGAALNIGKGSLLGSILPPEFFAGMNAAKEALTKGIDLYNQGKRIVDEVQNTIAIMKQFSQDPATALAYLPSVLGNLDGALGSFSELTGMSELFNGVRSVLPVVSEFSQEVAEIQSGLMAIQSDFQQGSSGSDWSEWFPSANRTMSEVAESFDFLAPRVAEMTAWIVLRNDDEVNNDTDRA*	phrogs_hmm	hypothetical_protein	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0049	shell	direct	high	932	0.999	GCA_003691635.1_00402
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	375489	375719	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	35944	36174	GCA_003691635_1_1_390	GCA_003691635_1_1_390	+	1843353	.	COG5004	P2-like prophage tail protein X  [Mobilome: prophages, transposons]. 	MTQTVLKHIVKQGERWDNLAYHYYGDALEYSRIIDANPHLSFYEVLPTGATVFISVLQVKPTNNEDMPPWLRGDNE*	mmseqs_cdd	nonviral_gene	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0050	shell	direct	high	230	0.996	GCA_003691635.1_00403
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	375712	376614	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	36167	37069	GCA_003691635_1_1_391	GCA_003691635_1_1_391	+	1843353	.	PDB:3CDD_F	tail-protein	MSNIAQPDFSLFYEKTNITADIEPHLIELSYTDYLEGQSDELVVQFEDISGKWIRAWFPTQGDKLKGAIGYKGEQLVDIGVFEIDEVEYQYRPSNITLRALSAGVSKNQRTLKPKAYEHTTLAQVIAVVAKRLKLKVAGEIKHIPIARITQYQERDLEFLARLGREYHHSFKVVNDQLVFTAKEKLGESESVLTIEEQDTISISLRDRISSTAKEVNISGYDANGKKVIKKSKKAKAKREDVSQAAKSSEDSLQIVTRGESQEQIDARGEAALAEQNDDQQSGTIKLWGNPKLVAGNTIL*	common_virus_hmm	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0051	shell	direct	high	902	0.999	GCA_003691635.1_00404
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	376609	377121	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	37064	37576	GCA_003691635_1_1_392	GCA_003691635_1_1_392	-	1843353	.	PFAM:PF05939.12	minor-tail-protein	MLTPTPKMNGGGGLGKETEKKSSTSFSNTVNMVAQGRPVPLTYGEILTGSLVISKGTKTFKADKVQFGDGYIQRASKGINNTLREFTVNYRSTWGVKTQNGKIAPVDTEALDELTEVEEFLKRHKGYKSFLWASYRKPNQGAPVKVVCESWTINRQQGYGSINMTFKETL*	hallmark_hmm	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0052	cloud	direct	high	512	0.998	GCA_003691635.1_00405
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	377075	377545	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	37530	38000	GCA_003691635_1_1_393	GCA_003691635_1_1_393	-	1843353	.	PFAM:PF06805.11	tail-assembly-protein-I	MRLEIYGGLKRFSNEFIVRGDKLKEGMSALLMQLGEFREQIQKGKFHVIVGNNKEKELSEETIYANFDEELTENTTLHIMPVIRGAKCLGFLQIVVGAVLIAASWWAGGAAGWSYLGASGFAGATAAFFCRCLHDFFGGSLNANPYPKNEWWWGIR*	hallmark_hmm	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0053	cloud	direct	high	470	0.998	GCA_003691635.1_00406
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	377557	378024	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	38012	38479	GCA_003691635_1_1_394	GCA_003691635_1_1_394	-	1843353	.	4TSD_B	HP1029	MIISSLTNPNFKVGLPKVITEVCDYLNTLDLNALENGRHDINDQIYMNVMEPETAEPSSKKAELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKPCCVVNGKTEKIKKLVVKVPVKLI*	hhsuite_tools	nonviral_gene	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0054	persistent	direct	high	467	0.998	GCA_003691635.1_00407
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	378100	378618	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	38555	39073	GCA_003691635_1_1_395	GCA_003691635_1_1_395	-	1843353	.	cd04194	A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis  adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.	MINGNITLPFEYLDFSRHTIAAVLDPYVTRIGRPYKDKDYFNAGVLYFNMDKYQLGISSFSKELITLHIQLKESLIYGDQDILNYYFKEQWIPLDKRYNFQLDHMISFDSLDTSPNIFHFTGPHKPLDNIFSENVCVNAVISLFRLYASISWQDIYSLPLGTIRANWINQER*	mmseqs_cdd	nonviral_gene	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0055	shell	direct	high	518	0.998	GCA_003691635.1_00408
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	378974	381103	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	39429	41558	GCA_003691635_1_1_396	GCA_003691635_1_1_396	+	1843353	.	TIGR03591	polyribonucleotide nucleotidyltransferase. Members of this protein family are polyribonucleotide nucleotidyltransferase, also called polynucleotide phosphorylase. Some members have been shown also to have additional functions as guanosine pentaphosphate synthetase and as poly(A) polymerase (see model TIGR02696 for an exception clade, within this family). [Transcription, Degradation of RNA]	MNPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVVAKKDVKEGQDFFPLTVNYQERTYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFFNEIQVVATVVSVNPQISPDLVAMIGASAALTLSGVPFNGPIGAARVGFIDNQFVLNPTMAEQKQSRLDLVVAGTDKAVLMVESEADVLTEEQMLAAVVFGHQQQQVVIEAIKEFAKEAGKPRWDWVAPQPNTDLINKVKAIAEARLGDAYRITEKQLRYEQIDAIKADVIEQITAEDEEISEGKIVDIFTALESQIVRGRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSAIFTRGETQALAVATLGTERDAQIIDELTGERQDHFLFHYNFPPYSVGETGMIGSPKRREIGHGRLAKRGVAAVMPSLAEFPYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEEEKFVVLSDILGDEDHLGDMDFKVAGTREGVTALQMDIKIEGITPEIMQIALNQAKSARMHILGVMEQAIPAPRADISDYAPRIYTMKIDPKKIKDVIGKGGATIRSLTEETGTSIDIDDDGTVKIAAVDSNAAKNVMGRIEEIVAEVEAGAIYKGKVTRLADFGAFVAIVGNKEGLVHISQIAEERVEKVSDYLQVGQEVNVKVVEIDRQGRIRLTMKDLAPKQETEINQEDSVEEQE*	mmseqs_cdd	nonviral_gene	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0056	persistent	direct	high	2129	1.0	GCA_003691635.1_00409
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	381185	382129	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	41640	42584	GCA_003691635_1_1_397	GCA_003691635_1_1_397	+	1843353	.	PRK11189	lipoprotein NlpI; Provisional	MRCFRLSRHFIVYLFSLCAILLLAGCVQSRGGFVSKNHVVLSEQNPNTHFEQEVMIVRLSQVLLVGKMSNEERASLHFERGVLYDSLGLWGLARYDLTQALALQPKMASVYNYLGLYLLLEEDYDGALDAFNTVFELDSGYDYTHLNRGLNFYYVGRNHLAQQDFLQFYQADKKDPYRVLWLYLNEQKLKPQEAQTNLVERAKGLSEDFWGTHIVQYYLGHISVEELQQRASEFAENSQQYAEILTETYFYLAKQKLNVGLVDEAAALFKLAMANQVYNFVEYRFAAFELMKLKPVQTEDEKEEKSAVTKAIVF*	mmseqs_cdd	nonviral_gene	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0057	persistent	direct	high	944	0.999	GCA_003691635.1_00410
GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote	cenote	CDS	382249	384090	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C18	42704	44545	GCA_003691635_1_1_398	GCA_003691635_1_1_398	+	1843353	.	PDB:1OYW_A	ATP-dependent-DNA-helicase	MTDKITFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLSGNDVLGMAQTGSGKTAAFALPLLAQIDPSEKHPQMLVMAPTRELAIQVADACEQFVKYAQGTRIVTLYGGQRYDIQLRALKQGAQVIVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENHQTALFSATMPEPIRRITKRFMNDPQEVKIKVNNENAPDIEQSCWYVHGVRKNEALLRFLEVEDFDAAIIFARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDRLRNGSLDIVVATDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLRNIEHLMKKGINEVELPNHLVLQECRRKKFVAKITKQLEHHDLEQYRSLLEDLFTADQDQEDIAAAMLMLLQGKQKLILPPDPPMEKRRRERNERGDRRENPRSAERRGERKGYGNPQPMDLYRIEVGRADGVEVRHIVGAIANEGDINSRYIGHIKLYDDYTTVELPQGMPKELLQQFGKTRVLNKQMQMSFLGAVKSDNSRGSDDFNGKRKGRGGDFRGERGRERGNDNRGNRKFNEKSNRTFSDKPRRDRRSSF*	common_virus_hmm	common_virus	C18	44545	339546	384091	GCA_003691635.1|CP033168.1@region_339547_384091@tool_cenote_CDS_0058	persistent	direct	high	1841	0.999	GCA_003691635.1_00411
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1046229	1046765	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	1	537	GCA_003691635_1_1_992	GCA_003691635_1_1_992	-	1843353	.	COG3101	Elongation factor P hydroxylase (EF-P beta-lysylation pathway) [Translation, ribosomal structure and biogenesis]. 	MEHKLEDIIAIFNQCFEEEYNTLLVKGGDEPIYLPANDEVPYNAIYFARGFYSSALHEIAHWLVAGKERRKLEDFGYWYEPDGRSEERQRDFEKVEVKPQALEWILATAAGFRYFASADNLNGNPGDTQPFKQAVYEQVKIYAEKGLPKRAEMLRHALAIFYGTEDRIDLSKFDVTRI*	mmseqs_cdd	nonviral_gene	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0001	persistent	direct	high	536	0.998	GCA_003691635.1_01038
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1047039	1047740	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	811	1512	GCA_003691635_1_1_993	GCA_003691635_1_1_993	-	1843353	.	PFAM:PF06152.10	minor-head-protein-and-DNA-pilot	MKRRGIDKPDDSSEFLVEVERPADKQGNREKTVGFKLPDGTIRVTDKGFDYNVGRLNYKPNLDLYPEKLAHAFAKVEMKGGEFKHDFELLAKRMAEMKQTLSPEGQKLTAEQMLQVRDSLTKNFKFAAGVLSAESKDLLKSKTGTVWLSDDTLIKQFNSRDGQDFGIDEYEALPDIINAPDKIVVDELGYQFYKDVNGKKQLAVLKVLSKEPEIFVQSFRLVSDKQWRKAFKE*	phrogs_hmm	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0002	shell	direct	high	701	0.999	GCA_003691635.1_01039
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1047912	1048388	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	1684	2160	GCA_003691635_1_1_994	GCA_003691635_1_1_994	+	1843353	.	PFAM:PF05840.12	nicking-at-origin-of-replication	MTKRGDQPICIEYEECEPNKYGEIRKKIVGVKNRFTEKKIITKLKNWVIKSAKSALGSTALNSETTETNKAHRAAWTCVNNCNRSKIEQQANLLMLPIGSPLKPSQIDLLMRHGRLRLNDYRWICCENDEVFIKEEKIPLAQAFGWGESLGDFRGNYY*	phrogs_hmm	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0003	shell	direct	high	476	0.998	GCA_003691635.1_01040
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1048342	1048704	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	2114	2476	GCA_003691635_1_1_995	GCA_003691635_1_1_995	+	1843353	.	.	hypothetical protein	MVGARAWGILGVIIINLGEIMKEKAVKPTIEPVSNFIKQKLNEDGFGRERIVAPLPANNASDKTFNDRIRYYFSVIEESFIESGLEPNVDYDFKDILSIARPLILAAIRKENLNFYWTTR*	.	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0004	cloud	direct	moderate	302	0.832	GCA_003691635.1_01041
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1048715	1049215	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	2487	2987	GCA_003691635_1_1_996	GCA_003691635_1_1_996	+	1843353	.	PFAM:PF03819.16	MazG-like-pyrophosphatase	MNKLIKNIEQWAEDRNLIKGSSINKQTLKMIEKFGKLCEGVAKGNINIIKDSIGDCFIVLTIINAQCRNESTETNANQSHLLEPTGHFRASSIDEALLRAAAKIGNFANQTTPPDDWDVNCLSNYLFLVSKMANLDFWDCVQHAYEQIKDRKGHMIDGVFVKEGDL*	phrogs_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0005	shell	direct	high	500	0.998	GCA_003691635.1_01042
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1049215	1049499	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	2987	3271	GCA_003691635_1_1_997	GCA_003691635_1_1_997	+	1843353	.	.	hypothetical protein	MITNEQVMEKLASIEDLLQKPVINEHSRELWTIDDVAKYFGFSMDHTRRNVIASPFFPAAVAISGRTGGKSKDLYVSGEVVSFCLKHKKRKARI*	.	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0006	shell	direct	high	284	0.996	GCA_003691635.1_01043
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1049530	1050531	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	3302	4303	GCA_003691635_1_1_998	GCA_003691635_1_1_998	-	1843353	.	PDB:1Z19_B	Integrase	MATIIKNGKRWRAQVRKFGVSKSATFLTQADAKKWAEMLEKQLESGKYNEIPDITLDELIDKYLKEVTVTKRGKREERIRLLRLSRTPLAAISLQEIGKAHFREWQNQRLKEVSPATVLRERSSLSALMAKAIEWDFITENPLKYLEKPKAPAPRTRRYDEHEIERLIFVSGYDVEHIEAPKTLQNRTGAAFLFAIETAMRAGEIASLTWNNINFEKRTAFLPITKNGHSRTVPLSVKAIEILQHLTSVKTESDPRVFQMEARQLDHNFRKLKKMAGLENANLHFHDTRREALTRLAEKVDVMVLAKISGHRDLSILQNTYYAPDMAEIAQRL*	common_virus_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0007	shell	direct	high	1001	0.999	GCA_003691635.1_01044
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1050981	1051403	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	4753	5175	GCA_003691635_1_1_999	GCA_003691635_1_1_999	-	1843353	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MARLSDWLTRKLTKGVYSHCEIAVMKEVFVSGHHYETEVMYECYSSSIRDGGVRCKQIDVYDREKWDLIELKGVTEAQIKAYFDRTLGCKYDWWGALGIVLGIKQKRSKYFCSEWCFNAICGGESGWRFSPNQLATIFQK*	phrogs_hmm	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0008	shell	direct	moderate	351	0.83	GCA_003691635.1_01045
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1051470	1052072	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	5242	5844	GCA_003691635_1_1_1000	GCA_003691635_1_1_1000	-	1843353	.	PFAM:PF14301.5	tail-fiber-assembly-protein	MKVYFFKDNLNNYQIFPPPQNINNVIEIEVKNESVLDNKQLVKNGNGYILVNKKPTELHIWNGNSWVIDEEKQTEIKRELIKRLVDSIDDTAANISSRWTRFAEEYKEREAAAIAFKAANYEGECSRYISDFAQRARLDNKTATNLILTQAAGLKKLQMELANQRMRKYELKHEALSDEELKNIHDDIIGKMQTLAESQQ*	phrogs_hmm	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0009	shell	direct	high	602	0.998	GCA_003691635.1_01046
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1052084	1053880	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	5856	7652	GCA_003691635_1_1_1001	GCA_003691635_1_1_1001	-	1843353	.	CDD:pfam07484	Tail-Collar-Domain	MADFNKPTVDSEYTQFPTEIRAAISAALSFLDGEHTNVPLKAKRWNPSTKIFEEYNGAQWVPMATEYKLPVDYNSLKNKPLPNSAVDDESDTKFASSAAVKTAYDKAAEAKEAASAKQSPATTLAGYGIGNFKVEQGQGDANGYKTDGNYYLASGQNLPENGEWHIEVVSGGATNAVRQIARKANDNKIKTRFFNGSNWSEWKDAGGDGVPIGAVVSFPRAVTNPVGFLKANGTTFNQQTFPDLYRTLGNHNQLPDLTRSDVGMTAYFAVDNIPAGWIAFDEIATQVTEQRYPELYRHLVGKYGSIASVPKVADRFLRNAGNGLSVGQTQEDEFKRHVHKHIENNTATNPRFYNDKTFDYGSRDSTDRASLDIATAVVDDNNDNWWITPNINSNFATGGDETRPKSLILKLCIKAKNTFDDVQFWVKAFGVVENAGALDAGTLAQNMQALSARVEQKIEENKQSTLREINNAKVDINQQFLQAKQDLSQIGTLKKVWEGNVNSGQITLSEKCFGKTLIFYLRLSEESNYDPNTTELVSFEVGAEDTGGGRLTSIREVIYNDLYRNTIPKEFTVYIAGDGKTINIGQIDNRYIKRIYIR*	common_virus_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0010	cloud	direct	high	1796	0.999	GCA_003691635.1_01047
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1053891	1057541	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	7663	11313	GCA_003691635_1_1_1002	GCA_003691635_1_1_1002	-	1843353	.	PFAM:PF13550.5	tail-protein	MQIVGRKGGGKGGGGGGRAPVEAPDSLKSCSYAKFIDVISCGEIEGPVNGLNSVYFGDVQLQDEKGKFNFNNVAIEWRPGSVRQAPSEICQTNEVTTDVNTEVKKDKPITRSIIAPEADIVRVTITVPGLSHQNKSNGDINGTKVELKVEYQANGSQWIDAGNIVIEGKTTSSYNREHSFRLTGEAPWNIKVTRLTDDSDSQVLQNKTIFSKITTVFEEKLTYPGVAYVGVQIDAEQFSSIPSRGYHCRGIKLKVPSNYNPETREYSGDWDGTFIVKYSNNPVWIYFDLLTNEEYGAGEYIKEDMLDKWSMYQIAKYCDELVPDGFGGREPRFTCNVYIQTKQEAFKLLRDLTSVFRAMSYWSSGTQMLVQDSPKEPIYQFNNTNVIGGKFSRSGSNIKTRHNVVLVTWNDPKKYFKQSVEYIEDSEAIVKMGYISQTEVVAFGCTSRGQARRLGKWLLYTEQYESEVITFSCGQDGAIPIPGEVIQVSDVHRSGERRGGRVKDGSTTNRIILDAEVEITKESTISIVNEKGELEQRAITQRGKLTEIDVRPVFTSVTENSTWIIASSDIKPEFYRVISIVESDDGSYTITASDYNPSKFEHIENGNELIEYDTTNNTLDTGVKNVVITDEIYRGLGGSIQTKIVVSYEPAKSLTSRYQIEYREGNGNWKQMEPTTLTSVDIPNVKDGVLYQIRIKTSNVLGVWSDNPIQNYEPIGRLRPPHNVSNLRHKAIAQEGAFLIWDLSPDIDLEYYEIKKGDTYESSKSVGKIKANEFNLGFIRAGEHKYWLSAVDSSDVRSESPTAVTFNISGGQVENLVAEIVGDEVLMTWGETKNNSFSTELYEVKKDDDVLALVKSTSFKFKADFNGNKKFTVTAIDLGGNRSESAQAQLIVHRPTPVSISQQVIDNYVMLRWQSAKATLPIVYYELRKGETIENSEFITNIDGLAFPQFETVGGLYKYWIIGVDSAGNRSEPQYTLSNVAQPPDYILKYDYNSSYDGIKNGSDKIDGKLYLPVRRDTWAEHFRSNNLATPKSQINRGFPLYLQPIDESGYYEEEMDYGTVLASSKITLTPKVISSGSYDINYHIAVKENAKDNWREHDQQSVYETNFRYVKFRITVSNAQKPVVIESLNLKLDQKQKTDGGTVQANASDIKGTWVNFATEFIDASVPVLTPQSKQPLFATSDFKDEPKPKGFYVFLFDKNGNRVSGKVGWVVKGV*	hallmark_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0011	shell	direct	high	3650	1.0	GCA_003691635.1_01048
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1057545	1058264	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	11317	12036	GCA_003691635_1_1_1003	GCA_003691635_1_1_1003	-	1843353	.	PFAM:PF06805.11	tail-assembly-protein-I	MDNSTANEQRTSCDIRKIRLKGELGKRFGKVHKLAVKTPAEAIRALCVLKRGFKEFLLESEKHGIVYRFLVQREELTTSSDEFQMRYGAQAEFHLIPVIRGSKRGGFFQLIAGAAMIGLAFWNPLGWATIGGTGFLSSAATLPLTIGASLVLGGISQLLVPVPKLSGPQERPENKPSYLFNGAVNTTEQGQPIPLLYGELIVGSAVVSAGLTDKEIPIRTNSTSNNETRGKLKFKRVSG*	hallmark_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0012	shell	direct	high	719	0.999	GCA_003691635.1_01049
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1058203	1058910	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	11975	12682	GCA_003691635_1_1_1004	GCA_003691635_1_1_1004	-	1843353	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MKHIDDAIAHAKQSYPHESCGFFVLKNGKLQYVACTNLAAETEDEFLIGIEDYARAEGVGEIRTVVHSHPDESCLPSIADQDAHKISGLEWCIIGLEGDEVSTHFMPALTEVPDLYGRKFIHGMTDCYGFVRDWYRQELGINLPNYNRIDGWWDNGGNLYVDNFEDAGFYPVKDLKIGDMIVMQINANVPNHAGVYLGDGLIGHHLYGRLSSKDVYGQFYRERTTHIMRHKENTP*	mmseqs_cdd	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0013	shell	direct	high	707	0.999	GCA_003691635.1_01050
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1058912	1059562	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	12684	13334	GCA_003691635_1_1_1005	GCA_003691635_1_1_1005	-	1843353	.	PFAM:PF05100.11	minor-tail-protein-	MSIYGQLQQYASHGWIELFELDLTKFGDIVYRFHDGLSPLGQAIVWQGLEYTPYPVKAEGFAVDGLNPVRPRITFSNLGGAITLVLAKLKGIEGARLTRKRTKIIYLDAVNFENGNLTADPNAHLPDDIFYISQKTSEDHLTVSFELLPATDLEGVKLPRRQIVAQYCTHKYKGQFCGYTGDKATCAKTLADCKAHFGEHSELPFGGFPSAAYMRI*	hallmark_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0014	shell	direct	high	650	0.998	GCA_003691635.1_01051
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1059724	1059822	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	13496	13594	GCA_003691635_1_1_1006	GCA_003691635_1_1_1006	-	1843353	.	.	hypothetical protein	MSNQTQLSKATIGLTDSQAGNGAQSISIISES*	.	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0015	shell	direct	moderate	98	0.99	GCA_003691635.1_01052
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1060299	1060832	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	14071	14604	GCA_003691635_1_1_1007	GCA_003691635_1_1_1007	-	1843353	.	pfam14020	Protein of unknown function (DUF4236). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 69 and 402 amino acids in length.	MAIKFRKTKKILPGVKLNISKSGVSVTTGIKGASINIGKNGVYRNLGIPGTGISKRDKLEFSSSKEEDYCYLDVLIDYVVDGQVVTLNVAITDYYPEKNAIWGYCEELEQESVFYLNDIQRVFDIKSGKDVEDVAEYFLQLNQSEDKEKSNDPPIGKILIVTFILFLIAYTFLFTKN*	mmseqs_cdd	nonviral_gene	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0016	shell	direct	high	533	0.998	GCA_003691635.1_01054
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1060894	1061238	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	14666	15010	GCA_003691635_1_1_1008	GCA_003691635_1_1_1008	-	1843353	.	PFAM:PF05939.12	minor-tail-protein	MAKERFKWKTLWGLSTETEPKVKEIKFGDGYSQRIQDGLNHIVSKATLTVRLNKRDKAAIDELESFLLRHGGYKSFEWLQPGKKTPILVVCRKWTSTDNGVYVDYDLPFEQVFN*	hallmark_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0017	shell	direct	high	344	0.997	GCA_003691635.1_01055
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1061239	1063617	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	15011	17389	GCA_003691635_1_1_1009	GCA_003691635_1_1_1009	-	1843353	.	UniProtKB:I0K2M4_9BACT	tail-tape-measure-protein-	MDQISNLKIKLEAETAKFTEEINKARNSLNGLGKTTGGINLTKLAIGGLAAAALSAAGALAAMYSSAMAGIELYAETERYLARTEAQLKATGAAVGFTSDELNDFAGSLAMNTLASVDGVRSAMSVMMTYRSVTGETFKTAIKLAQDLAEVYKTDVSSEARNLGRALESPAEAVSLLKRKGIELTETQKDLIQSFVESGEKAKAQEIILHELQKRVGGAGEAAASDTVAGALDTLGQATDELKEAFATSTGITDLYKASINKLAEAFLWLTKVMRGVDTKTHVDTLEKQIDVLEKSKKSLEEKAKSGIYGDGINDALAHTTKELEKARENLAKSRKELDAQEAESRKRQQEANEAKEKHERSERETAGASTLGKIEDKLKSRSEKLTAQYEKDKKALENLVLSEEEIRRRGFDNIDALRQSSLDKLTQSYNKELAELQKSEDKKSAVKSSSKTNDLARLDMAYADELQKITLAHQERIALIGKMAISERDAKERGFASALELRKHYLELENQAYEDAINKQKDKMRRDEYDKTEKVRSFFNDVRGSGNDPYVQNDITRENQLTKAQELYDQQLLSVQQFEEAKALIEDTYRQRKEDLDRQAVSSQLSMASSLFDGLAGLAEVAGGKQSGAYRTLFAISKSFQIAQSMLNLHAAVMKAMNDPTAVTPAQKFANMAAVAAQGAAVLQQIKSVTISGARANGGPVGGGRAYLVGERGPEIFVPGATGQITSNENLNKALGSGGGVNSVVINQTNNFDGNGADNAELARMVAAATKQQVYEVIRNESRPGGMMGGR*	hallmark_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0018	shell	direct	high	2378	1.0	GCA_003691635.1_01056
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1063559	1063864	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	17331	17636	GCA_003691635_1_1_1010	GCA_003691635_1_1_1010	-	1843353	.	PFAM:PF06223.11	Minor-tail-protein-	MLREMSVAEYFCWCKYFGKRPFTLELLDYGYGTVASAVYNVAALKQVVTAQDFSVLHTAKPNAEMTTEEMMDASIANDGVLRIGPDQQFKNQTRGRDGKIY*	hallmark_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0019	shell	direct	high	305	0.997	GCA_003691635.1_01057
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1063927	1064310	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	17699	18082	GCA_003691635_1_1_1011	GCA_003691635_1_1_1011	-	1843353	.	PFAM:PF06894.10	tail-assembly-chaperone	MLKKVKFELRDQVLVVSAISALDYLDYVDYLNSLDKPEPVSENDTEQELNSKLNKITRNNLMAHTRLIAISLSYDSDKSVDDLQKELLTTWTQADIFRVLEAVQDVCEFPQADPSESTQEDGEQKNA*	hallmark_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0020	shell	direct	high	383	0.997	GCA_003691635.1_01058
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1064316	1064816	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	18088	18588	GCA_003691635_1_1_1012	GCA_003691635_1_1_1012	-	1843353	.	PFAM:PF16463.4	tail-tube-protein	MAKNTTPTKGAGTMFYRLKDDKESTVIVNGTIKAADIKKPENWDRIAKIKELSPGEVTADSYEDNYLDDANADWKSTSQGAKSAGETTLTLAWLPGDTAQQALVSDFNTGKKKYYLVVYPNGVRDVYYAWVSSLGKTVPQNEVMTRTVKLTNVGKPLLAEYNEAGD*	hallmark_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0021	shell	direct	high	500	0.998	GCA_003691635.1_01059
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1064809	1065213	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	18581	18985	GCA_003691635_1_1_1013	GCA_003691635_1_1_1013	-	1843353	.	PFAM:PF06141.10	Minor-tail-protein	MKIHSKIRQAVIDALRPHLPKVKEFSNGKPSFTDIESQSPTVAVFISGVSPTGYLDGTMQATLHVACFMKSAAREDDLDKLTQEIYESGIVESSLTTLTENIAFTAFDYEQDDQMATWIAADLQYAITCEVDNG*	hallmark_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0022	shell	direct	high	404	0.998	GCA_003691635.1_01060
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1065210	1065755	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	18982	19527	GCA_003691635_1_1_1014	GCA_003691635_1_1_1014	-	1843353	.	PFAM:PF06763.10	minor-tail-protein	MAINDDIEKAKKALSDIDKKAVPQAMARTINNIAAKVMVRSVIETSKKVDVPKRLIKGRAKLERAKPRRLSAFIRVNRGNLPVIRLVTGGGRFVRRGENKGQLKIGNRLYPRAFVQKLKNGRVQVLQRQGKDRYPIDVVKIPLKTPLTESFNAEVKRAYEKDMPQELRTQLIRQIQIVVKK*	hallmark_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0023	shell	direct	high	545	0.998	GCA_003691635.1_01061
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1065755	1066060	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	19527	19832	GCA_003691635_1_1_1015	GCA_003691635_1_1_1015	-	1843353	.	PDB:2KX4_A	head-closure-knob	MSRSTLSPFDDALAQADKVISDVMMSVYVINGKKYKAVLDETPKEMEPMNGVYRTLTMFKSSSYKPKKGDKTTINGVDYVVTGFTFNSGTIMLQLEEDASY*	hallmark_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0024	shell	direct	high	305	0.997	GCA_003691635.1_01062
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1066041	1066364	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	19813	20136	GCA_003691635_1_1_1016	GCA_003691635_1_1_1016	-	1843353	.	COG5471	Predicted phage recombinase, RecA/RadA family [Mobilome: prophages, transposons]. 	MAKNYMQDGNTVRFTAAAAVKSGDVVMLENLAAIAVADVEKSAVGVGLTTGVFTVKAKAADDIKQGAIVYWSATEGATTTAGTNKRLGIAWHASGATVDTVDVKINA*	mmseqs_cdd	nonviral_gene	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0025	shell	direct	high	323	0.997	GCA_003691635.1_01063
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1066443	1067693	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	20215	21465	GCA_003691635_1_1_1017	GCA_003691635_1_1_1017	-	1843353	.	PDB:6WKK_D	Major-Capsid-Protein	MQAELNKRNADIKAVFAPFGTTHNDLLVECLGDLSITADQAKDKLLAKLGAGTTPSAAVTPYADNGNIVGDSVKQSLLARAGIDKDKVNAKDNAYNAMTLRELARASLADRGISVSGQNAMSMVGLAFTHSSSDFGQILIDVAHKSLLKGWETAAENFDQFTSRGTLTDFRAAKRVGLGDFGYLPQVGEGEEYTYGTIGDEGASVALATYGQLFSITRQAIINDDMHLLTKIPEKMGQAARATIAKLVFALLTGNAIAQDGKKLFDASHKNSFDNAALDVTNIDKAIQMMNGFVNTRGEPLAIEPDFMLLPTSLYTRAKQVLGSASVEGADINSGIINPIRDIVPTVKSARLQVANPKSWYLINKEAIEVSYLDGIDTPYMEQQQGFTVDGVSTKVRIDAGVNVIDYRGIVKVTNK*	hallmark_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0026	shell	direct	high	1250	0.999	GCA_003691635.1_01064
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1067740	1068450	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	21512	22222	GCA_003691635_1_1_1018	GCA_003691635_1_1_1018	-	1843353	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MATSATKTNNQSWYSIKAKANDTAEISIYDEIGFWGVSAASFAQDLKDCGNNIKQINLHIHSPGGDVFDGIAIYNLLKNHPANVTVYIDGLAASMASVIAMAGNEVIMPENAMMMIHKPWGIQGGDAEDMRKYADLLDKVENTLIPAYASKTGKTPEELAEMLSAETWLNGKECVEQGFADKLAEPLVAMASIKSRKLEDFENMPKAMKDMLFKPQGNAGASAPQATPTPAQPGTN*	common_virus_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0027	shell	direct	high	710	0.999	GCA_003691635.1_01065
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1068422	1069945	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	22194	23717	GCA_003691635_1_1_1019	GCA_003691635_1_1_1019	-	1843353	.	CDD:COG5511	Major-Capsid-protein	MGILDKTIVAISPKWGAQRAKSRYVMNAYEAAMPSRTHKAKRESQGANVSTKQSAVSLREQARALDQNHDIVIGILDKMEERVIGSRGIHIEPQPMNLNGDVNETLAEQIRKKWAEWSIRPEVTGQFTRPELERMLLRTWLRDGEVFIQLVRGSVAGLNHSTKIAFSLEALEPDFVPMNTLDTANLIQGVELDAWRRPKSYRVYMDNPQENNRTYGRVKSVPAENMLHLAFKKRLHQLRGVSMLHGVIIRLADLKDYEESERVAARIAAAFTMYIKKGDAALYGDNEDYSADSPERDFEIAPGAIIDDLKPGEDIGLINSNRPNVNLETFRNGQLRATAAGTRSSYSSIARDYNGTYSSQRQELVESFEGYSVLQDTFVAHISRPIYREWLKMAIVSGEIDVPVDIDPASLYNAVYSGPVMPWIDPTKEAQAWKERIKGGLATESQAVRASGSNPAEVKRRRRVEVEENRKFGLKFDTDLTNTGTANDKTKNDSVAGGDGNERYKDE*	hallmark_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0028	shell	direct	high	1523	0.999	GCA_003691635.1_01066
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1069949	1070167	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	23721	23939	GCA_003691635_1_1_1020	GCA_003691635_1_1_1020	-	1843353	.	.	hypothetical protein	MIYDKDELEEKIRALDEKIENAQSQVSFNGRSVSYQVSEWTKQRDRYQQMLNELLAETRQRVKRHRIKYARF*	.	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0029	shell	ambiguous	low	3	0.014	GCA_003691635.1_01067
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1070164	1072284	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	23936	26056	GCA_003691635_1_1_1021	GCA_003691635_1_1_1021	-	1843353	.	CDD:COG5525	Large-Terminase	MFASAKDIRRDIANLLKPPRRMKVSEAVAEYMRVPVGGGNSVKWDKDTAAYMLDPMDCLNSREYDAVIFVGPARTGKTIGLIDGWITYAIICDPSDFLLVQLTQEKASEHSRKRLDRTFRCSPEIAKRLSPRKNDNNVHDKYFRAGNLLKIGWPSINVLSSSDYKYVALTDYDRWPEDVDGEGDGFSLASKRTTTFMSAGMTLVESSPGKDIVDIKHHPKTTHEAPPTTGILSLYNRGDRRRFYWQCPHCKEWFEPSMANMVGYRNDTDYVKASENARLQCPHCQSLVDPDKKRALNIGGKWLKEGQTIDKDGVIHGEGRNSRIASFWLEGPAAAYQTWAQLTYKLLTAEHEFEMTGSEETLKAVTNTDWGLPYLPRSALEQRRSDELMERREDTEKRTVPYGCRFLLAAVDVQGGRNRRFVVQIVGYGENSERWLIDRYNIKSSMRSNSEGESLPIDPSAYPEDWDLLISDVLNKQYRIEGLDGGVMPILAMAVDSGGEDGVTDNAYKFWRRCKRDGISKRVYLVKGDSTKRQKLISRTYPDNTSRSDRHAKARGDVPLYLLQTDQLKDRISNALSRETIGANYIHFPSWLGEWFFDELTYEERGQDGKWRKPGKGNNEAFDLFCYAHAIAILRGYERIKWGDEDNVPYWAKLPSVNPNVIRKESSAPEEAESAVEIEQVKPQPKPKPKSNWLNGGASKKKGGWL*	hallmark_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0030	shell	direct	high	2120	1.0	GCA_003691635.1_01067
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1072287	1072760	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	26059	26532	GCA_003691635_1_1_1022	GCA_003691635_1_1_1022	-	1843353	.	pfam07278	Protein of unknown function (DUF1441). This family consists of several hypothetical Enterobacterial proteins of around 160 residues in length. The function of this family is unknown. However, it appears to be distantly related to other HTH families so may act as a transcriptional regulator.	MDNLYDLKLNINQIAELVGMHRQTVSQRLAGLTPAIGSNSKLKLYALSDLIKIGLAEKMTADVDSLSPVERRAFWQAENERLKYERDTGELVPSFEVAQEMGFLAKAVVQSLDTLPDILERDCALTPTQLTRVIQVIDDVKSQMSLHIQAGDNKSEE*	mmseqs_cdd	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0031	shell	direct	high	473	0.998	GCA_003691635.1_01068
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1073037	1073426	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	26809	27198	GCA_003691635_1_1_1023	GCA_003691635_1_1_1023	-	1843353	.	.	hypothetical protein	MLTIKIIQDGVTSITESNSFVFYDETSREYKEMLRLADKLKEKPTTLNGIYYTQPMYGDQECKEVIREESIYCSARNNPTDKIIGMMIDFIPDDEHGDQGIEKEIAYSLIGTGDHIYVTNEQGKTVFNI*	.	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0032	cloud	direct	high	389	0.997	GCA_003691635.1_01069
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1073661	1073984	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	27433	27756	GCA_003691635_1_1_1024	GCA_003691635_1_1_1024	-	1843353	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MAKYIYMALGVVVVVLFGALRYQSGVIDELEITTKQQEKTIQQQEDANKSLSLALQQERDAVIAQQERNDEIERVATENAESVKTIIKTLPCAHTRLPQSVLDRLYK*	mmseqs_cdd	nonviral_gene	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0033	shell	direct	high	323	0.997	GCA_003691635.1_01070
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1073977	1074579	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	27749	28351	GCA_003691635_1_1_1025	GCA_003691635_1_1_1025	-	1843353	.	PDB:3WH1_A	Chitinase-	MTMMISEVTFNKIFPHAVKGVYQAISAQIEKAGCVTKMQQAMFLAQCGHESGGFTRFKENLNYSWLGLSKTFHKYFPDSLTAKKYERKPELIANRVYANRLGNGDEKSGDGWKYRGRGLIQITGKDNYAAFRKWLGRDIEPEDVASNLDLSVKTAIWYWQCCELAELNSVEKVTRRINGGLNGIDERCKLYRALMVTDNG*	common_virus_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0034	shell	direct	high	602	0.998	GCA_003691635.1_01071
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1074545	1074904	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	28317	28676	GCA_003691635_1_1_1026	GCA_003691635_1_1_1026	-	1843353	.	TIGR01594	phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions]	MPIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPTIRYVLIDAAMCASIAGVAVPICTHLFGHTEYSSFLGTMIGFVGTEKIREFLFKFINRRIDKDDNDDFRSDIQ*	mmseqs_cdd	nonviral_gene	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0035	shell	direct	high	359	0.997	GCA_003691635.1_01072
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1075144	1075662	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	28916	29434	GCA_003691635_1_1_1027	GCA_003691635_1_1_1027	-	1843353	.	pfam06530	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.	MRKFSELSELTIEQEEFVDRYMYQWGAWVRSGRLDKPQLNIIAKLMQSVIPAEPNEPICDDETGFMISQTIEMFFKKNDQILHFIVFAYYVNKRTINFIAEHLHGKSKAKEMRPCAGKSNVRVPSFRTIYREVEKEIHFAKAIIHELLITCFIIQRTSRERATNIKKIKITY*	mmseqs_cdd	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0036	shell	direct	high	518	0.998	GCA_003691635.1_01073
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1075663	1076208	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	29435	29980	GCA_003691635_1_1_1028	GCA_003691635_1_1_1028	-	1843353	.	PFAM:PF05766.11	NinG-recombination-protein	MAKEYKCKVCGKAFVKTFSSTQKVCSPECAIKLARDNVQKAQERAEKKRQRERKAKLKSRSEWLKEAQSVFNKFIRLRDKNEPCISCGRYHQGQYHAGHYRSVGACPELRFCELNVHKQCAPCNDHKSGNIIEYRINLVNKIGADKVAWLERQDHEPKKYTIEDCKAIIKYYKTKIKELEE*	common_virus_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0037	shell	direct	high	545	0.998	GCA_003691635.1_01074
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1076208	1076300	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	29980	30072	GCA_003691635_1_1_1029	GCA_003691635_1_1_1029	-	1843353	.	.	hypothetical protein	MKRLNDDEILELKIVLLIAAVWVMFNMVFG*	.	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0038	shell	direct	moderate	92	0.989	GCA_003691635.1_01075
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1076297	1076716	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	30069	30488	GCA_003691635_1_1_1030	GCA_003691635_1_1_1030	-	1843353	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPIDDKKPLVVKIQPITRSLEQNSKLHALLSDISKQCEFNGKKRDIDTWKMIMVSAHKIATGGQAEMVIGLEGEVINLRESTAQMGVKRLASLIEYIQSWGVQNGVRFNDRWRFE*	mmseqs_cdd	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0039	shell	direct	high	419	0.998	GCA_003691635.1_01076
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1076753	1076974	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	30525	30746	GCA_003691635_1_1_1031	GCA_003691635_1_1_1031	-	1843353	.	.	hypothetical protein	MMKDFYIHRSEYHDGSTKGFRHGIKHKRHDCFRGDVRVLQRIDGKMVQISRVRKRFKTYEDAHAWARGLKCKE*	.	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0040	cloud	direct	high	221	0.995	GCA_003691635.1_01077
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1076971	1077894	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	30743	31666	GCA_003691635_1_1_1032	GCA_003691635_1_1_1032	-	1843353	.	PFAM:PF02384.15	DNA-methyltransferase	MSFEEHNNRKKANKFAEYITGESLRRYLAEKVEKYLGKNPSVFDGAAGSGQLEQFIQPSKFIAVEIQAESCAALANNYPDAEIHNTSFFLYQSEPKSDCVVMNPPFSLKFKELAEEEKAAIQADFPWKKSGVLDDVFMLKGLANAYRFGFFIMFPGIAYRNTEKTLREVIGNQLVELNLIQNAFEDTPISVLFLVVDKTKSNNKTYRELYDCATNKIINADEWLIDSDKWDTISPPEPPKEKIDPMKLELMSQAQLKEQIRAQIQFSGMVFDLERWPRKDFEKFCDEVCALIQEEKKSNRFLFGWGE*	phrogs_hmm	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0041	shell	direct	high	923	0.999	GCA_003691635.1_01078
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1077891	1078472	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	31663	32244	GCA_003691635_1_1_1033	GCA_003691635_1_1_1033	-	1843353	.	PFAM:PF05869.10	Adenine-specific-DNA-methyltransferase	MTEQQFDKNTWQTPCYVFEWLSQRFGWFDLDGCATANNALTCHYIGEPNSDNDEHQSIADDFLMPIEQMLDVLLDEVAERCSAPLRIYVNPPYSNVTPYLQRAKELCDAGYLVVMLLNNDKSTQWYQNHIQGVANEVIDITGGRIAFINPVTGKEIKGNSKGQMVVVFDPTMEDFVTRSISLDFIKKVGGYSK*	common_virus_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0042	shell	direct	high	581	0.998	GCA_003691635.1_01079
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1078469	1079104	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	32241	32876	GCA_003691635_1_1_1034	GCA_003691635_1_1_1034	-	1843353	.	PFAM:PF06992.10	Replication-protein-P	MANSITQDQINTLPPERAQRAEETINWLFQELKSIFPGWRAAFETEADYFSAKKTWLRVLAREKITRPQLENGLCEAEKSLDKFLPSVGLFVYWCKAYDYHALGLPNEAELYQRYNTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKAIPKLLTEAVEKVRLNFPFEDIPKMIPAKPSFYDKAKADKARDSLMAMMKGALQ*	rep_hall_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0043	shell	direct	high	635	0.998	GCA_003691635.1_01080
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1079089	1079847	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	32861	33619	GCA_003691635_1_1_1035	GCA_003691635_1_1_1035	-	1843353	.	pfam13730	Helix-turn-helix domain. 	MSMRLMVQAMNCKVGNPARKLVLLKLADNANDDGICFPSYQYIADKCEMTRRSAINHIEYLIKMGLVSKKERKNKDGSISNLYFLHLEQGSENFALGGENISLGSENFALGGSENISPRTSHSLEPVNEPKKTTQKSESEMLLEQFGITGQLAKDFIAHRKAKKGVINQTQLNRLQKQADKAGISICEAVEICIERNWQGFNASWDWRDEKLRPNLPHLGQSHPNKPKFDDTQTGWSAGMNFTVDGTQWQIP*	mmseqs_cdd	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0044	shell	direct	high	758	0.999	GCA_003691635.1_01081
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1079844	1080512	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	33616	34284	GCA_003691635_1_1_1036	GCA_003691635_1_1_1036	-	1843353	.	PFAM:PF03374.13	KilA-protein	MNQLLTITKENASTLTMSSREIAEITHKEHKNVLRVIRDLIEQNLVAQIEPLKFEYRNQWFDYYELNKRDTFVVVARLSPEFTAAVVDRWQELENQQKPTALIPQSFSEALMLAAQLQAEKERNAPKVAFVDHYVEVGTSKSFRETAKILKMPERALVNRLVEDKYLYRQSGVLLPYQSAHTKDLFTVKTGTAEHGHNYTQTRVTSKGIEFIASRYASELML*	common_virus_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0045	shell	direct	high	668	0.999	GCA_003691635.1_01082
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1080558	1080782	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	34330	34554	GCA_003691635_1_1_1037	GCA_003691635_1_1_1037	-	1843353	.	pfam15943	Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	MKLKEYLNQTERGEKAKLARFVGVKPPHITFWASGIRQVPAERCPLVEQFTKGKVTCEELRPDVNWAVLRNSDK*	mmseqs_cdd	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0046	cloud	direct	high	224	0.996	GCA_003691635.1_01083
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1080919	1081830	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	34691	35602	GCA_003691635_1_1_1038	GCA_003691635_1_1_1038	+	1843353	.	pfam00717	Peptidase S24-like. 	MRPIKEIRHDNLLLLIEEAGSTSELANKTGIAVSYLLQIKNKNAIQNGKPKGIGDKIAAKLEDGMNKPRGWLDKAHSAALVLPTQLHLADNIRFLMQKKGISDLTALAQSAHIDMLALTALMASPDEHQHTQTLQKLANFFIIDTQRLLYEDIALNPKGINFLKAKALPTHRVPIRGYTQLGPDAQWEEVDYPVGTGDGYILWPSRDQDVYALKCVGESMMPRIRHGEYVIIEPNHAVNNGDEVLVVTMDKKVMVKIFAYERDGMVLLQSINTAEFEAINLYRSDIDKMHYVAGIAKGSLVME*	mmseqs_cdd	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0047	cloud	direct	high	911	0.999	GCA_003691635.1_01084
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1081841	1083538	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	35613	37310	GCA_003691635_1_1_1039	GCA_003691635_1_1_1039	+	1843353	.	pfam10592	AIPR protein. This family of proteins was identified in as an abortive infection phage resistance protein often found in restriction modification system operons.	MSVIHVRQIATKITELFEGKVDISDIQDPQSNEGKSRCLTRYLAAYAVMNYAQTSEIDAANSLVDGYDDNGIDAFYYSAANKKIVIVQSKWNHNGNGQPGNGDVKKFTDGIRDLIDLQFERFNHKIQNKQHIIENAINSFDAKFDVVLIHTGNEAISIHNERTIQDLVDELNDAGDGTKENIMSFHYLSQAKIHASLAKGVEGDPINIDVGLTQWGKVDEPYYAVFGIVSGEEINSWYKQFGNRLFSKNIRKMLGFTDVNEEIKDTIQHNPEMFWFYNNGITLIADSVKKSIANGNNRDIGTFQLLNANIVNGAQTVSTIGQIDENLQSNLESVRIPIKIISLDRAPDNVGINITKANNRQNRIENRDFVSLDEHQIRLKTELSLDNVEYNISRIETFKTNDNAFDLSEATIALACASKQVSLAVQAKREIGKFYENVNKQPYTTIFNIGTTGRYVYIAVKCLRKIEQLIQDKISSLPKRSGKAYGTLIHGNRMLAYLVLKQINIHTLVQQNEIDLDLLTIPDKFNLAYEKLLNIIEHHYPDKVLGTLFKNATICKNIDTMFNQS*	mmseqs_cdd	nonviral_gene	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0048	cloud	direct	high	1697	0.999	GCA_003691635.1_01085
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1083813	1083983	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	37585	37755	GCA_003691635_1_1_1040	GCA_003691635_1_1_1040	-	1843353	.	COG3422	Uncharacterized conserved protein YegP, UPF0339 family [Function unknown]. 	MYFQIFKGVNNQWYWRLKAANHEIIAVSEGYTTKQNCLHCIHLVMDTNRNTPIYES*	mmseqs_cdd	nonviral_gene	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0049	shell	direct	high	170	0.994	GCA_003691635.1_01086
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1083998	1084219	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	37770	37991	GCA_003691635_1_1_1041	GCA_003691635_1_1_1041	+	1843353	.	.	hypothetical protein	MQDEMKRYAISYYFDGKRWATDVYAHSFEEAEEKLKAMSQGTVDGEIHLSVYIPENPLSKVSRLITRIAKKFM*	.	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0050	shell	direct	high	221	0.995	GCA_003691635.1_01087
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1084540	1084710	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	38312	38482	GCA_003691635_1_1_1042	GCA_003691635_1_1_1042	+	1843353	.	.	hypothetical protein	MEEKQENSLSDKDKNLIKQAVLESAAKNTSLTPLELAESLCKAFILIQADTCSKDE*	.	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0051	shell	direct	high	170	0.994	GCA_003691635.1_01088
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1084670	1084888	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	38442	38660	GCA_003691635_1_1_1043	GCA_003691635_1_1_1043	-	1843353	.	.	hypothetical protein	MKKSKADTLALMLTRDILGTPTQTQSSQMTEFSEYNAKELGAFIRTLSAELESLDENTDVIRLLSMYQPESK*	.	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0052	shell	direct	high	218	0.995	GCA_003691635.1_01089
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1085072	1085323	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	38844	39095	GCA_003691635_1_1_1044	GCA_003691635_1_1_1044	+	1843353	.	.	hypothetical protein	MKNKITDLNNHLFSQLEKLLDEDLTDEELNREIKRANAVSGIAANIIASNAISLKAMTLFENRQIERESPDFLRISKAQGDDL*	.	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0053	shell	direct	high	251	0.996	GCA_003691635.1_01090
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1085313	1086338	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	39085	40110	GCA_003691635_1_1_1045	GCA_003691635_1_1_1045	+	1843353	.	pfam10548	P22AR C-terminal domain. This domain was identified by Iyer and colleagues. It is found associated with pfam10547.	MTSNAERFKFTDEHIAFIRLHWDKKPSDLIKLFQQQFDLLINRNVFYKLKKKHNIPSLKHANRYSKEELAFIKANCTLNERILAQKMEVYFNKPFNPHALKVLRVKRQWLTGRSGRFEKGENLKPIGFERYCENAKCWLIKASIKRYERKSHYLWRKAGRKIPRGHIIDYKDGNSRNCTLENLELISRVEMAWRKKLQYHQLNDEIKPTFSAFVKLKEGINQRKKEKDMEENQSPNIATQEPTTFTFEFTEHELQTMAWAWFVLMRNMETFQALYPAMEKIGSSYAPSIYDQAYEYRPTIRDMHKIIERITSGFKFDQMTNWRILKRIRHFNPKKMEFLKI*	mmseqs_cdd	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0054	shell	direct	high	1025	0.999	GCA_003691635.1_01091
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1086389	1086730	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	40161	40502	GCA_003691635_1_1_1046	GCA_003691635_1_1_1046	+	1843353	.	.	hypothetical protein	MKRSKSAFFQEKQSFTHFMKGSEKWLTRISYFLAALVIALIVGGISLDANANPTDWHDNELSQQIQQEARCELKGGIYENGVCLPPNLTLATEKELQDYTAQKQAEINRTWSK*	.	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0055	shell	direct	high	341	0.997	GCA_003691635.1_01092
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1086730	1086918	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	40502	40690	GCA_003691635_1_1_1047	GCA_003691635_1_1_1047	+	1843353	.	NF033650	ANR family transcriptional regulator. ANR family transcriptional regulators include the AggR-activated regulator Aar. The name ANR (AraC Negative Regulators) refers to an effect on, rather than homology to, certain AraC family transcriptional regulators.	MRLTYKTYAESAVKAEKKGHYLETAKNWADAKRHTAVQKNIEYCQHRIDFCERHHFRLKSMS*	mmseqs_cdd	nonviral_gene	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0056	shell	direct	high	188	0.995	GCA_003691635.1_01093
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1086929	1087093	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	40701	40865	GCA_003691635_1_1_1048	GCA_003691635_1_1_1048	+	1843353	.	.	hypothetical protein	MKRTTLSPWQCDNPYDYYAQFETESIEQDEPEEDWREPEDADCEYWQSNCYGRG*	.	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0057	cloud	direct	high	164	0.994	GCA_003691635.1_01094
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1087096	1087239	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	40868	41011	GCA_003691635_1_1_1049	GCA_003691635_1_1_1049	+	1843353	.	.	hypothetical protein	MEETPRERLESKAELLNAIRNWLWQERITAEELQAEIEYIQRNPLPF*	.	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0058	shell	direct	high	143	0.993	GCA_003691635.1_01095
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1087249	1087749	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	41021	41521	GCA_003691635_1_1_1050	GCA_003691635_1_1_1050	+	1843353	.	PFAM:PF05565.10	resistance-protein	MKLYEITEQLENIKELLENPEFADNADIAKALDAVQQDFDKKAENVVYVIKNTEGDIEVIDAEIKRLQAMKKQRQNGIEQIKNYLKHNMEATGTAKINCPLFTISYRESKQSAVQLDEDLFLANNCDETLVNVKITANKTEIKARLKAGEEIPGAKLVDSQVLTIR*	common_virus_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0059	shell	direct	high	500	0.998	GCA_003691635.1_01096
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1087760	1088413	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	41532	42185	GCA_003691635_1_1_1051	GCA_003691635_1_1_1051	+	1843353	.	pfam04404	ERF superfamily. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to ERF.	MELQSANLSELMPELIQAISQLGNLSKDKQGYGYKYAELSKVLDTCRPILAEHNLVITQLVTVLNDEPTLVTTLFHKSGQFLRSCYPLVKAGVKQANDAQQVGAAITYARRYALTAMLFMAQEDDDAASVGKREQSSSPKSERPNNSNKSTQQAMSSTQANVTSKSVIEQLKDRLKGKTKKECGEIYDKSIVWLEEKHPDLVDEYNLMYNDYLLNLM*	mmseqs_cdd	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0060	shell	direct	high	653	0.998	GCA_003691635.1_01097
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1088423	1088857	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	42195	42629	GCA_003691635_1_1_1052	GCA_003691635_1_1_1052	+	1843353	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MARNTNTVILVGHLGSDPEIRQFQNGGQIATFNLAIGDDYRDKQGNTVKRTHWIPIVVHGNSADVARQYLQKGSKICVTGKLVQESWQDQNGNNRTALKVATQSFEMLDSKANNETQQPTKDKEKPDPLSAAAEQDRFNDDIPF*	common_virus_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0061	shell	direct	high	434	0.998	GCA_003691635.1_01098
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1088917	1089096	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	42689	42868	GCA_003691635_1_1_1053	GCA_003691635_1_1_1053	-	1843353	.	PFAM:PF16777.4	transcriptional-regulator	MKLSINEIKARSDEKRGVKSKSYKLPLATIAEIEQLSKQHDIPQNQLIIQAVELWKQSR*	phrogs_hmm	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0062	shell	direct	high	179	0.994	GCA_003691635.1_01099
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1089416	1089652	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	43188	43424	GCA_003691635_1_1_1054	GCA_003691635_1_1_1054	+	1843353	.	.	hypothetical protein	MNLLKSLARKILKEELENNKYHFEKLGNENLAKSRRIKELESDNDRLRIKVEQIRQDNLKLRENRPHFKHHKKKGGRK*	.	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0063	shell	direct	high	236	0.996	GCA_003691635.1_01100
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1089649	1090008	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	43421	43780	GCA_003691635_1_1_1055	GCA_003691635_1_1_1055	+	1843353	.	.	hypothetical protein	MNEINIKLPLHKFQTLIHRYVRDSLHDNGTPVLICIHDVKEYWAVLDSHTREKIKGEVKFFIKEYHHLRNDEFFKKDLAAWSELADWINENRSSPSTTATTAKPIVPVLPVINPKQRKK*	.	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0064	shell	direct	high	359	0.997	GCA_003691635.1_01101
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1090016	1091185	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	43788	44957	GCA_003691635_1_1_1056	GCA_003691635_1_1_1056	+	1843353	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MFTYGSICSGIEAVSVAWKGLGKPLWFSEIEPFPCAVLTYHYPNIPNLGDMTTLPEKILNREIPAPDVLVGGTPCQAFSIAGLRNSLDDERGNLTLMLIHILEAIDYVRYQDGKQPCILLWENVPGVLSTKDNAFGCLVGRLAGAFEPLQPPGGKWTGAGYVHSEMRNIAWRILNAKHFGLAQRRKRVFLVASARERSVAQILFERKSLQGHSQSCGKTQQVFTAYTESSFGAFSENTISGTLRQSGGSLGGGSETFVVHGTQDPIISTSTAHCLGRNNGQENVLFDISERRNTVRIYDEITPTLTAKMGTGGNNIPRINRQSIIRKLTPVECERLQDFPDNWTKIPYRNKSIEDCPDSPRYKAIGNSMAVPVIKWIRERLTNYLGERK*	common_virus_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0065	shell	direct	high	1169	0.999	GCA_003691635.1_01102
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1091182	1091424	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	44954	45196	GCA_003691635_1_1_1057	GCA_003691635_1_1_1057	+	1843353	.	.	hypothetical protein	MTAKQIRVGVSPITNQIFVGYVNKKGDTWTTKQDATMEILFAVAQHAMEFGEPIILSEETADGRFVKKYSITVKRIRGEE*	.	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0066	shell	direct	high	242	0.996	GCA_003691635.1_01103
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1091421	1091699	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	45193	45471	GCA_003691635_1_1_1058	GCA_003691635_1_1_1058	+	1843353	.	pfam04448	Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	MSKNNNGWIKCSERLPEPFDTSEELRNLSNRHLIYYTEDDVYWFIGFGWYLLDEKVDEEGGLIPYWQLDELGMIDIEIEVSHWQPLPQPPEE*	mmseqs_cdd	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0067	shell	direct	high	278	0.996	GCA_003691635.1_01104
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1091703	1092014	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	45475	45786	GCA_003691635_1_1_1059	GCA_003691635_1_1_1059	+	1843353	.	.	hypothetical protein	MNIEYEWLLINDLDDEDPEKEEVEKIIKDRVWLEFDRKKRPFYLESSVAEELFIRNHSDWECYEEDEYVFLAIREQGSERYSIFRVSPWYRLEPDVDEIYFDD*	.	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0068	shell	direct	high	311	0.997	GCA_003691635.1_01105
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1092144	1092344	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	45916	46116	GCA_003691635_1_1_1060	GCA_003691635_1_1_1060	+	1843353	.	PFAM:PF10013.8	excisionase-and-transcriptional-regulator	MEPTTRKLHNLKTVSSLLDMSAPTIYRRIKNDPNFPKPHLVGGNNFWTDAQINDYIERIESGCYSS*	phrogs_hmm	hypothetical_protein	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0069	shell	ambiguous	low	3	0.015	GCA_003691635.1_01106
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1092341	1093588	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	46113	47360	GCA_003691635_1_1_1061	GCA_003691635_1_1_1061	-	1843353	.	PDB:1Z19_B	Integrase	MAVLVKPLSITEINNAKPKEKDYSLSDGQGLFLLVRMNGSKIWRFQYYKPISKKRTLISLGVYPEISLKDVREIRDLYRSLLAKNIDPQDYRLQQEQKAIQERQFTLTEMGKEWLYLKKNEVDTGRLKEVTFIDIGKRLERHLFKVLGHYSISDISAPLAIEKLKPLERAGKLDTLHRIIGYLNQIMIYSVNRGVINYNATADIGRVFIRPIAENNPTIRPEQLPKLFEDLQNSTLEIETRCALELLLLTAGRAGAITQLEWENVDFENSLLNIPKEKMKGRQGKVQDFILPLSKQAVTILRLLQKLNRCNSKFVFPSKKNPRQPISKETPNKALGRIGYRNILTAHGLRSVFSTAMNEAEFNSEIIEVCLAHFEYSSVRGTYNKAKYMPQRIEYMQWWGDFVEEASDGKALMGC*	common_virus_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0070	shell	direct	high	1247	0.999	GCA_003691635.1_01106
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1094133	1095569	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	47905	49341	GCA_003691635_1_1_1062	GCA_003691635_1_1_1062	+	1843353	.	PRK05826	pyruvate kinase; Provisional	MSRRLRRTKIVCTMGPSTDRDNNLEKIIAAGANVVRMNFSHGTPDDHIGRAERVRSIAKKLGKTVAILGDLQGPKIRVSTFKDGKIFLNVGDKFILDAELPKGEGTQESVGLDYKTLPQDVVPGDILLLDDGRVQLKVLSTDGAKVFTEVTVGGPLSNNKGINKLGGGLSADALTEKDKADIITAARIGVDFLAVSFPRSSADLNYARELAQQAGLNAKIVAKVERAETVANDEAMDDIILASDVIMVARGDLGVEIGDPELVGVQKKLIRRSRQLNRAVITATQMMESMISNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMASVCLGAEKMPSINVSRHRMDKEFETIEESVAMSAMYAANHMKGVAAIVTLSSTGRTPLLMSRISSGLPIFALSRNQETLNLCALYRGVTPIYHGEESRTEAGAKAALQSLKEKGYLSTGDLVLVTQGGQGATQTNVCRTLIVE*	mmseqs_cdd	nonviral_gene	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0071	persistent	direct	high	1436	0.999	GCA_003691635.1_01109
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	CDS	1095711	1097117	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	49483	50889	GCA_003691635_1_1_1063	GCA_003691635_1_1_1063	+	1843353	.	PDB:3BGW_F	DNAB-Like-Replicative-Helicase	MASQPQIKSSDKKTAQVSIPPHSTEAEQAVLGGIMLSNQHWDGIAERVIADDFYTFQHRLIFTEMEHLMRNQSPIDLITLDQALRSRGVSDEVGGFAYLAELSNNTPNAINILAYADIVREKAILRELISVGNRIAENSYSPKGQDIKLILDEAEREVFAIAEKRTTSSEGPQNVINVLESTIEKIDILSKLENHSGVTGVTTGFTDLDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCENAAMASEKPVLVFSLEMPAEQIMMRMIASLARVDQTKIRTGQNLDEIEWNKIASVVGMFKQKNNLFIDDSSGLTPTDVRSRARRVYRENGGLSMIMVDYLQLMRAPAFSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRTLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSEDKGVAEIIIGKQRNGPIGRVRLKFNGQFSRFDNLAEQREYRDDY*	rep_hall_hmm	common_virus	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_CDS_0072	persistent	direct	high	1406	0.999	GCA_003691635.1_01110
GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote	cenote	tRNA	1093831	1093904	GCA_003691635.1	CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635.1_CP033168.1	GCA_003691635.1|CP033168.1	GCA_003691635_1_1	GCA_003691635_1_1@C60	47603	47676	tRNA-Val	tRNA-Val	-	1843353	.	tRNAscan-SE score: 70.7	Val	NA	tRNAscan-SE	.	C60	50889	1046229	1097118	GCA_003691635.1|CP033168.1@region_1046230_1097118@tool_cenote_tRNA_0001	.	.	.	.	.	.