core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	1	168	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	2	169	GCA_003942385_1_8_1	GCA_003942385_1_8_1	-	106663	.	cd04791	Lanthionine synthetase C-like domain associated with serine/threonine kinases. Some members of this subgroup lack the zinc binding site and the active site residues, and therefore are most likely inactive. The function of this domain is unknown.	MYAIDIDKELMFPGDYGYKLSGDLFSGSSGVLLALETLGGKSWKNLFPLIPETLDQ	mmseqs_cdd	nonviral_gene	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	475	1374	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	476	1375	GCA_003942385_1_8_2	GCA_003942385_1_8_2	+	106663	.	cd09024	Aldose 1-epimerase, similar to Lactococcus lactis lacX. Proteins similar to Lactococcus lactis lacX are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.	MVIELSNEFLTVQFKERGGELASIKDRDGVEYLWQGDPEYWSGQAPVLFPNCGSVRNDKAMYIMEDGEVLEGILPRHGLVRKKDFQFTQINERQVMFTIENNEEMLEQYPYPFRLTIFYSLDESKIEIEYLVENLGTKNLMPYFIGAHPGFNCPLIPGESYEDYSIEFEREESCTIPESFPDTGLIDVNARHSFLVKQKSLPLDYALFEKDAITLDQLHSRSVVLKSRNHTKTIKVDFQDFPNLILWSTPNKGPFIAIEPWGGLSTSVNESGFFDFKQXVTLIAPGKSDHKCYVIEVDG*	mmseqs_cdd	nonviral_gene	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0002	cloud	direct	high	899	0.999	GCA_003942385.1_01542
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	1782	3488	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	1783	3489	GCA_003942385_1_8_3	GCA_003942385_1_8_3	+	106663	.	COG2856	Zn-dependent peptidase ImmA, M78 family [Posttranslational modification, protein turnover, chaperones]. 	MLASNLVNGLIESDLKVMAHLAVRVQTKFDVELDNADIQLFVRIRYXLENGLSQLEILQIKSYVHSNEKGPIPYFSTEFVPYIRAKDMDKIAEGILEAYCPDMLVSPMGLPIYDFAEKLGVVIEEGTLSKDGSIFGEMVFKDSLVTFFENDQEVKRMVPGGTVLVDPQVKGLRNQGSYNNTIIHECVHWLLHRTHHEYKSLLGSQELKISSRIHRPAFKEGQWNTYDWMEWQANNIAARILMPGKTTKMMVQEFFAKYSLEFDTDQRVAMFEKVIDDLAHFFQVSRWAVKIRLMQLGYTEFEGIYKYVGKEYIKSYTCEADAIQNNQTFTISFNNACFLNWKNEQFRELMDSGRYVYVDSHFCLNSEKYVKMLEPGVYQMTEYAYSHMDECCLVFDIHYKGKRSISPKDFNDYILYRGNLPELNIELDFSEHLIEIRSLPEYTGQIFPEIMRIMATLPNHFCGTMRSHRDRKHCSQEKLVEHSGLSISTIARMETQHDNVNKIENIVAVCIALKLYPDFSFDLIEKSNCRFNNQVPHHCAYKMILRNCYHLSLEEVNQLLLSMDVKTI*	mmseqs_cdd	nonviral_gene	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0003	cloud	direct	high	1706	0.999	GCA_003942385.1_01543
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	3708	4175	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	3709	4176	GCA_003942385_1_8_4	GCA_003942385_1_8_4	+	106663	.	PFAM:PF09152.9	nucleoside-2-deoxyribosyltransferase	MKTVFICSPYRGNVVENEKKAIAYSKQANKAGYVPLAPHLLLTRFLNDQNPDERIQGLTMGQELLKRCDEIWVYGPTISQGMKYEIDTAKELGKPFRLFHENGQPINPHTMDIDDRVESLFAIQCSGHKVRYAGEGTQRSTKESVWSKFPSMFLE*	phrogs_hmm	hypothetical_protein	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0004	shell	direct	high	467	0.998	GCA_003942385.1_01544
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	4191	4490	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	4192	4491	GCA_003942385_1_8_5	GCA_003942385_1_8_5	+	106663	.	.	hypothetical protein	MAQMKKLETVVKNLRLLADSLEELSSPFRLETVEKVPEEVEKAASPTVTIEDIRKVLAEKSRAGKTEQVRDLLQQYGANKLSAVEQKHYPSLLEDAKGL*	.	hypothetical_protein	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0005	cloud	direct	high	299	0.997	GCA_003942385.1_01545
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	4492	5616	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	4493	5617	GCA_003942385_1_8_6	GCA_003942385_1_8_6	+	106663	.	pfam10926	Protein of unknown function (DUF2800). This is a family of uncharacterized proteins found in bacteria and viruses. Some members of this family are annotated as being Phi APSE P51-like proteins.	MAEKQHALLSASSSHRWLTVPPLARLEEFFEQRTSSAAEEGTLAHALAEYKLRMALGVKAEEPEGELTLEMEQCTEDYVAFILDELELLKQGTNEPIILIEQMVDFSHYVPEGFGTADCVLVAEGLLHVMDFKYGKGVLVEAENNPQMKLYALGALELYDALYDIEEVKMTIFQPRKGNISTAILQREDLLDWAEKELKPKAELAFKGEGEVTYGPWCQFSTCNAVLRARMDYHKQLEKFQLSSPHLLTDGEIEEILAHVDDLVKWATEIKDYATKVAVESHKSWAGFKLVEGRSIRQFTNEEAVIQAAEAEGFTDLYKQSLVSLTELEKRMGKKEFNRVLGHLVHKPQGKLTLVPESDKRKEYIPAAAEFGGN*	mmseqs_cdd	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0006	shell	direct	high	1124	0.999	GCA_003942385.1_01546
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	5618	6151	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	5619	6152	GCA_003942385_1_8_7	GCA_003942385_1_8_7	+	106663	.	PDB:1JE5_B	DNA-Helix-Destabilizing-Protein	MSKETKVIVAGRLSYANVWEPQSINGSEPKYSVSVIIPKTDQVTIQKIKQAVELAKQEAISKFGGKIPANLKLPLRDGDIDRPDDEAYANSYFINCNSKQKPQVVDQQVQPILDQAEVYSGCYGRVSVTFYGFNSNGNRGVAAGLGNIQKLKDGEPLGGRVRAEDEFGTIEDDDFLA*	common_virus_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0007	shell	direct	high	533	0.998	GCA_003942385.1_01547
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	6194	8125	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	6195	8126	GCA_003942385_1_8_8	GCA_003942385_1_8_8	+	106663	.	CDD:cd08642	DNA-Polymerase-I	MRTLSIDIETYSDVDLTKCGVYRYVDSPQFEILLFAYKIDEENTQIVDLAQGEELPKGILSALRDDAVVKTAFNANFERVCLSKYLKQKLSARSWSCTAVQAASLGLPLSLEGVGRVLNIEEQKMKEGSRLIRYFCLPCKGTKANGMRERNFPHHAPEDWELFKRYCKRDVEVEQAIRERLRNYPLLESEQFLYQLDQEINDRGIEVDLQLVEQAILCDLSYKEQVTKRAYELSGLENPNSVSQLKGWLEEQGVFMESLGKKEVTKHLKEADGEVLEMLRLRLLMSKTSVKKYQAIERCVCSDGRVHGLLQFYGANRTGRWAGRLVQVQNLPQNKLKDLSLARTLVKEGQFETLDTLYDNVPGVLSELIRTAFVPKAGHQFIVADFAAIEARVLAWLSGESWRLDVFEQGGDIYCASASSMFGVPVEKHGVNSHLRQKGKIAELALGYGGSVGALTAMGALDMGLEEEELQPLVNQWRSANPHIVAFWWEIDKVAKQVYETREPKKIKNLVISYQSGMLFITLPSGRKLAYVKPRMGMNAFGKPGLTYEGIGESKKWTRLETYGPKLVENIVQGIARDLLAYGMMQLKQKGLAIVLHVHDEAVVEVREESVATVCQLLATKPDWAEGLPLRADGYACEFYKKD*	rep_hall_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0008	shell	direct	high	1931	0.999	GCA_003942385.1_01548
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	8136	10490	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	8137	10491	GCA_003942385_1_8_9	GCA_003942385_1_8_9	+	106663	.	PDB:1NLF_A	replicative-DNA-helicase	MELAISLGNKRTDKIWTQTSYSLEQFEARISTTIRTAETVAEYKKLAKSKQDNIKDVGGFVLGRLDKGRRKKDAVLSRSALTLDMDFATPGIMDEVELFFSFFAYFYSTHKHTKEHPRLRLIIPLSREVSAEEYQAVARKVAEDIGMELFDDTTYEPSRLMYWPSTSQDGEFIFKKLEGDLLSPDTVLARYQNWKDTTEWPVSSRQNKLLERAIAKQADPLGKSGLIGAFNRTYTITEAIEKFLGDVYKPSSIPGRFDYIHATTSAGVVLYDDKFAYSHHATDPYGHRLLSAFDLVRLHLFGDQDDEEKKDSAKQQSYKAMQDYVLKDDATRETLARERLADATLEFADTENWQASLELDKTGRVKDTLSNIATILHFDPNLQNIVYNEFKNVIDVIGELPWRRSRPGWNDSDLANAKLYFERVYGIWSPTKFKDALLAVVTSYRLYHPIKEYLEPLIWDGVERIDSLLIVYLGAKDTAYTRAVMRKTMVAAIARIYEPGIKFDSILVLNGPQGIGKSTFFLKLGKEWFSDSLAISDMRDKTAAEKLQGYWILEISEMTGIRKTDVETVKSFISRQDDKFRQAYGVNVESHPRACIIVGSTNSEGGFLRDVTGNRRFWPIRVSDASQLKPWELVDVDQLWAEAKVYYEAGEELFLKGKAENEANKERQEAMESDDREGIVVEYLDTLLPDNWAKMDLYERRTFLAGSDFGSQTLKGTEQRERVCIMEIWCECFGKERQNIKKADSYEIEGILNKIGGWNKYTGNTTGKMKFSLYGTQRAFVRVP*	rep_hall_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0009	shell	direct	high	2354	1.0	GCA_003942385.1_01549
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	10734	11045	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	10735	11046	GCA_003942385_1_8_10	GCA_003942385_1_8_10	+	106663	.	PDB:4QBL_E	Nuclease	MREREIEEKLRLESQKRGGLAMKFVSPGLVGVPDRIVILPQGRLGFVELKAPGEKPRNIQVRRMEQLRKLGFLVYVLDDKEKIGEILDDIQGTSLSRGGDSIH*	common_virus_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0010	shell	direct	high	311	0.997	GCA_003942385.1_01550
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	10996	12348	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	10997	12349	GCA_003942385_1_8_11	GCA_003942385_1_8_11	+	106663	.	PDB:1Z6A_A	Helicase-of-the-snf2-family	MTYKAHPYQEVATRFIEEHETACLILDMGLGKTVITLTALWNLILDSFEVRKVLVIAPLRVASHTWKSELDKWEHLKGIDISIAIGSESERRVALSRVAFIYTINRENIVWLIQNHLFDFDMVVIDELSSFKSYQAKRFKALQKVRFKIKRMVGLTGTPGNIMDLFSEIGILDGGERLGRFITGFRNQYFDPDKRNGQVIFSYKPKDGAEEAIYDKIADMTISMKAVDYLNMPERVDNEVLVEMSEHELAVYKEFKTEMMVSIKGQVLDAVNSASLSNKLLQMSNGMVYDENRKAVLLHDQKLVALEEMVESMNNRPLLVAYWFQHDLKRIKERFSEARVIQSNQDIEDWNKGKIVLGLVHPASSGHGLNLQAGGHTICWFGLTWSLELYQQLNARLWRQGQKETVVVHHIITKSTMDEQVMKRLKEKDISQQSLIDAVKYELREEEADG*	rep_hall_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0011	shell	direct	high	1352	0.999	GCA_003942385.1_01551
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	12341	12829	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	12342	12830	GCA_003942385_1_8_12	GCA_003942385_1_8_12	+	106663	.	PFAM:PF05263.10	transcriptional-regulator	MDKIESLFYDYKNMEKEMKLLRSQLNQFVGISENEMLDTMVYGRSDEPKVQTSKNPYRSENIALSYKEETEKANRELYQYLSKRYCRLVQELHFFEVAISQLPDDLAEFVTDLVIVSESWDNLMVKYHISRSTISRWKQKAIKELRLIYAIRNQQLEDFLLS*	phrogs_hmm	hypothetical_protein	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0012	shell	direct	high	488	0.998	GCA_003942385.1_01552
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	12841	13191	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	12842	13192	GCA_003942385_1_8_13	GCA_003942385_1_8_13	+	106663	.	COG2337	mRNA-degrading endonuclease, toxin component of the MazEF toxin-antitoxin module [Defense mechanisms]. 	MCKRGDIYYVDFGNQKNSHIQQGIRPAIVVSNNKANDHSHLVTVVPLTKQVQKKKHLPTHVYLPKKVFKGLKWSSLVLAEQVLTVDKFQLKNKVMTIREEAWLVRIDRALRVQIGV*	mmseqs_cdd	nonviral_gene	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0013	shell	direct	high	350	0.997	GCA_003942385.1_01553
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	13305	13532	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	13306	13533	GCA_003942385_1_8_14	GCA_003942385_1_8_14	+	106663	.	.	hypothetical protein	MWQEGIFTSHNRKVVYLAKVSTEPFEDGIDNGRIFKLGVDVDGEEVISYDRGWEMYPEDESLEEILDQILERFPA*	.	hypothetical_protein	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0014	cloud	direct	high	227	0.996	GCA_003942385.1_01554
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	13691	13921	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	13692	13922	GCA_003942385_1_8_15	GCA_003942385_1_8_15	+	106663	.	.	hypothetical protein	MKILEVEILSTLFVSGXYIYHIKVQFLTLYNQQTYSMQVMPVTKEAISDMATYMMENYYRHMVRCSLEKDFTCIAL*	.	hypothetical_protein	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0015	shell	direct	high	230	0.996	GCA_003942385.1_01555
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	14130	14723	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	14131	14724	GCA_003942385_1_8_16	GCA_003942385_1_8_16	+	106663	.	pfam18813	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease4. A predicted endoRNase of the Barnase-EndoU-ColicinE5/D-RelE like nuclease fold found in polyvalent proteins of phages and conjugative elements. The predicted active site contains a conserved histidine residue.	MAKQEEYKKPNYGERIKLQRFLIQLHFAAVFFKKNFXGKVMYYHTESNVVEVYFSPTNFMHLCGIYYQKGPGSFFDDCLANHISIDQVSIKKDGTTMQKLQVLGAVQELVGTFVCLTGSGKYLRLEFDYSLRTRKQILALTLKDTQSKIVPQSLLNLKSKEVFPKGDPVTCIYSKSLLGEELKQHFLKDGLDWDDYL*	mmseqs_cdd	nonviral_gene	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0016	cloud	direct	high	593	0.998	GCA_003942385.1_01556
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	14938	15303	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	14939	15304	GCA_003942385_1_8_17	GCA_003942385_1_8_17	+	106663	.	PDB:5H0M_A	HNH-endonuclease	MPRRPALPCKHPNCPRLVPYGSKYCEEHSQLHSLEVKSTKAKGYDSRWNKARLRFLKLHPFCVRCLKRNRYRQATVVDHIVPHRGNQKLFWDEGNWQPLCKSCHDHKTVIEDHTPIYGYDF*	common_virus_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0017	.	unmatched_CDS	none	0	0	.
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	15512	15934	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	15513	15935	GCA_003942385_1_8_18	GCA_003942385_1_8_18	+	106663	.	PFAM:PF05766.11	HNH-endonuclease	MDDFQRKQIRKLRSEGLGYQSIGKIVGLSRDSVRNYCKRNPELLGYRNAVTKMMKDQASGLPCCLHCKETFIPKGTGRPKKFCSDACRRYWWQNHPELHQKQNTAYYELTCQHCGKSFLSYGNANRKFCIHACYIQSRFY*	phrogs_hmm	hypothetical_protein	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0018	shell	direct	high	422	0.998	GCA_003942385.1_01557
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	15944	17212	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	15945	17213	GCA_003942385_1_8_19	GCA_003942385_1_8_19	+	106663	.	PDB:5HFJ_C	Adenine-specific-DNA-methyltransferase	MKVTQDMTWVSLPIDSLKPAAYNPRKKLKKGDKEYEKIKKSIVEFGYVDPIIVNFDGTVIGGHQRLTVLSDLGYKEVQCVQVRIDDENKVKALNVALNKITGAWNEELLADLMVDLQDADFNLDLTGFEAPEIDQLFSKVHNKEVKEDDFDVDGELTKPTISKQGDIWHLGKHRVICGDSTKPETYQLLLEDKKANLVVTDPPYNVNVEETAGKIKNDDMSDADFYQFLFSMFVNVEQSMEDDASIYVFHADTEGLNFRKAFKDAGFYLSGCCVWKKNALVLGRSPYQWQHEPVLYGWKQKGKHQWFSDRKQTTIWEYDRPKSSKEHPTMKPVQLMAYPIQNSSMRGTLVLDPFLGSGSTLIAAEQTGRVCYGIELDEKFVDVIVKRYMEATEKSDVQLIREGRALTFEEAVSEYEKETGES*	common_virus_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0019	shell	direct	high	1268	0.999	GCA_003942385.1_01558
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	17187	17429	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	17188	17430	GCA_003942385_1_8_20	GCA_003942385_1_8_20	+	106663	.	.	hypothetical protein	MRRKRAKAKKVTEAEAIQHLKELSEKIVDLPQNSPGVEELRNAIERARKTRQFGYLEQEYLNKVMMELLEEFKAKSQKNE*	.	hypothetical_protein	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0020	cloud	direct	high	242	0.996	GCA_003942385.1_01559
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	17509	17766	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	17510	17767	GCA_003942385_1_8_21	GCA_003942385_1_8_21	+	106663	.	.	hypothetical protein	MMLYSNAEANLILGQARNRLALLSKGFITLAQEQELDSVEQEDATQVQNLLTSIQEADTSGKMADMELQLIVEDTNRIWEEVSFT*	.	hypothetical_protein	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0021	cloud	direct	high	257	0.996	GCA_003942385.1_01560
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	17787	18002	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	17788	18003	GCA_003942385_1_8_22	GCA_003942385_1_8_22	+	106663	.	PF14192.6	Domain of unknown function (DUF4314)	MNAKIVELLKRRYPAGTRVRLLKMEDPNPVPVGMLGTVEDVDDIGSLIVHWDNGRQLHVLHGIDEVEKSDS*	hhsuite_tools	nonviral_gene	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0022	shell	direct	high	215	0.995	GCA_003942385.1_01561
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	18051	18524	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	18052	18525	GCA_003942385_1_8_23	GCA_003942385_1_8_23	+	106663	.	PFAM:PF05119.11	Small-Terminase	MAQKGRKPKPTSLKVLEGNPGKRPLPKNEIQPKKKAPRCPSWLEEDAKKEWKRMGKILEGLGLLTDMDMTAFAGYCQAYARWKEAEEFISKHGSIIKTPNGYLQQVPQVSISQTNLKIMLKFCEQFGLTPSARTRLASMDSEVGSGDEMEDLLGGRL*	hallmark_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0023	shell	direct	high	473	0.998	GCA_003942385.1_01562
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	18521	20113	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	18522	20114	GCA_003942385_1_8_24	GCA_003942385_1_8_24	+	106663	.	PFAM:PF03354.14	Terminase-large-subunit	MTYHYIPSPFMLPTSHYDEKKADRAVTFIQNLCHTKGRWAGQKFLLLPWQEQIVRDLFGIVKEDGNRQFLTAYVEIPKKNGKSELAAAIALYLLYADGEASAEVYGAACDRNQASIVFDVAKQMVLMSRALEKRSKVMGATKRIINYSNAGFYQVLSAETGTKHGLNVSGLVFDEIHAQPNRHLYDVLTKGSGDAREQPLFFIITTAGNDKNSICYELHTKALDILKGRKKDSTFYPVVYGLSEEDDWNDEENWLKANPSLGHTIGIDRVREAYLNALDNPAEENVFKQLRLNIWTNSAVTWIPEHIYDKGNHPIDIENLRGRDCYAGLDLSSTSDITALVLMFPPRHEGENYQVLPFFWLPEDTLALRSRRDHVLYDVWEKQGFLLTTEGNVVHYGFIERFIEELSTIYHIREIAYDRWNATQMVQNLEGMGLTMVPFGQGYKDMSPPSKEYYKLMMEGKIQHGGHPVLKWMAQNVVMRQDPAGNIKPDKEKSVEKIDGIVATIMALDRCIRHQKNDGSIYDERGILSF*	hallmark_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0024	shell	direct	high	1592	0.999	GCA_003942385.1_01563
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	20201	21463	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	20202	21464	GCA_003942385_1_8_25	GCA_003942385_1_8_25	+	106663	.	PFAM:PF06074.12	Portal	MGILERLGLKRQRGEPKNKYEGNDFSLLFGRTTSGKTVNERTALQTTAVYACVRILSETIASLPLHVYRYTEGGKAKDTEHVLYTLLHDEPNPDMTSFVFRETLMSHLLIWGNAYAQILRDRSGQVIGLYPLLPDQMSVHRSEKGKLYYVYNRYEEDNPNFQEKGSIVLSQEEVLHIPGLGFDGLIGYSPIALAKNAVGMTLACEEYGASFFGNGANPGGVLEHPGILKDPGKVRDSWNAVYQGTRNAHKVAVLEEGMSYKQIGIPPEEAQFLETRKFQINEITRLFRIPPHMVGDLEKSSFSNIEQQSLEFVKYTLDPWVVRFEQALKKSLLLPEEKKTHFIKFNVDGLLRGDYQSRMNGYAIGRQNGWLSTNDIRKLEELNPIPSEEGGDLYLINGNMTKLKDAGGFMKTNQEGESHE*	hallmark_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0025	shell	direct	high	1262	0.999	GCA_003942385.1_01564
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	21456	22139	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	21457	22140	GCA_003942385_1_8_26	GCA_003942385_1_8_26	+	106663	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MNKFWNFSEDEMGRVLHLNGTIASESWVDDDVTPQIFKNELMSGSGPLTLWINSPGGDVFAAAQIYNMLMDYKDDVTVNIDGIAASAASVIAMAGTTVNMSPVAMMMIHNPMTVAIGDSKEMEKAIAMLSEVKESILNAYEIKTSLSRVQLSHLMDAESWFNAKKALELGFADSILYEPAPHEDGTVQSMMFSRAAVTNQLLLKLADKKPQPKTPVSQLEKRLSLLK*	common_virus_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0026	shell	direct	high	683	0.999	GCA_003942385.1_01565
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	22153	23334	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	22154	23335	GCA_003942385_1_8_27	GCA_003942385_1_8_27	+	106663	.	PFAM:PF06673.10	Major-Capsid-protein	MSKILQLREKRAQVWEKAKSFLDTCRDDKGLVSVEDTARYEEMEDEVVRLGKEIERLERQEALDKELASPVSQAIVANPTVGGGNPKGGRSSKAYNTAFWNNIRKKNFYDIENTLSIGDDSRGGYLVPDEYEKRLIQALQEENFMRSLATVIQTSSGERKIPVVSGNGEATWMDENSKFKESEDTFSQVTLGSHKVGTAIKISDELLYDSVFDLESYMANEFARRIGVKEEEAFLIGDGTGKPTGIFQTVTEGATSGGATITFDDVMDLYHSLKSPYRKNAVWILNDSTVKALRKLKDNNGNYIWQPSVQAGVPDMILNRPYFTSSFVPTIDTGKKVLAFGDFSYYWIADRQGRSFKRLNELYAESGQVGFLASQRVDGKLILNEAVKVLTMK*	hallmark_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0027	shell	direct	high	1181	0.999	GCA_003942385.1_01566
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	23343	23624	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	23344	23625	GCA_003942385_1_8_28	GCA_003942385_1_8_28	+	106663	.	CDD:cd08054	Head-Tail-Connector-Protein	MKISLEEAKNYLRVEHSEDDHLIQVMISASEELCSSILRKNLEEVTEEKEVDFLQTIVLFGTAYLYEHREEGGQESLVELLKALLSAHRRDVF*	hallmark_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0028	shell	direct	high	281	0.996	GCA_003942385.1_01567
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	23624	23968	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	23625	23969	GCA_003942385_1_8_29	GCA_003942385_1_8_29	+	106663	.	PDB:2KZ4_A	Head-tail-adaptor	MKIAPLSKRVFFEKRVIVKDAIGNESSQWQLLFSRWCSCKVLLETEGTAPVMVKNIHQLRFTLRYDPAIQELDSKTTRLRFEDKVYNIKAIDSLTYPQKIILIDATEEVQYGNN*	hallmark_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0029	shell	direct	high	344	0.997	GCA_003942385.1_01568
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	23955	24323	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	23956	24324	GCA_003942385_1_8_30	GCA_003942385_1_8_30	+	106663	.	PFAM:PF04883.11	putative-tail-component	MATIDPSDLARAVQKELENYVERSTETVKAVVEDSTKEAVNELKKHSPKKRGKYARGWTSTATKETNLALTKTIYNRTPGLTHLLENGHAKRGGGRVEGIRHIAPVEEKMIRQFEERLKEKL*	hallmark_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0030	shell	direct	high	368	0.997	GCA_003942385.1_01569
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	24320	24637	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	24321	24638	GCA_003942385_1_8_31	GCA_003942385_1_8_31	+	106663	.	PFAM:PF05657.10	tail-completion-protein	MKKDEWFPFLSSLGLPCAYHHFEEGHSPAPPFVVYWFPASQNYGADNLAYHKGSQVRLELYTEKKIFELEEKIEAKLDSHSLFFDKEETYLDTEKLYQVIYHLSQ*	hallmark_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0031	shell	direct	high	317	0.997	GCA_003942385.1_01570
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	24652	25230	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	24653	25231	GCA_003942385_1_8_32	GCA_003942385_1_8_32	+	106663	.	PFAM:PF04630.11	tail-tube-protein	MEKNKVTFGLQDVHWAEVTKEGDDGALTYGTVERLRGAAELTLEPQGDSGSYKADNINFYTTESNDGYEGTLKLALLTQEFLTRVLGETIDAQSKVISEIASSEKKNFALMFRFEGDKKETLHVLYYCYASRPTVASKTKSGSDINEVELKFKASPRPLDKLVRRRTTEDTPEDVKKTWFAKVYEPTVKPGG*	hallmark_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0032	shell	direct	high	578	0.998	GCA_003942385.1_01571
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	25233	25652	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	25234	25653	GCA_003942385_1_8_33	GCA_003942385_1_8_33	+	106663	.	PFAM:PF12363.7	Tail-assembly-chaperone	MRKTIQLSGKNIELATNAYTPIAYKKEFGKDYFQDLFQMLQAESILKKAEQLEEGKTLSASDVDMSMLADFDMTFFHRLFWVFAKSANPSIEPFEEFFMGLEEFPLQTVGPVLMELLNQGMTTRKKSMRRKKRVAKPSR*	common_virus_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0033	shell	direct	high	419	0.998	GCA_003942385.1_01572
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	25691	25816	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	25692	25817	GCA_003942385_1_8_34	GCA_003942385_1_8_34	+	106663	.	.	hypothetical protein	MSDLKEITIGMALDYQTDYVEVRTKEADRTRKATQVDFDNF*	.	hypothetical_protein	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0034	shell	direct	high	125	0.992	GCA_003942385.1_01573
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	25840	28956	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	25841	28957	GCA_003942385_1_8_35	GCA_003942385_1_8_35	+	106663	.	UniProtKB:R4KJ43_9FIRM	Minor-tail-protein	MAGTIKGITIEIGGDTQPLQKALKGVNHEALEASRELKQIDKALKFDTGNVTLLTQKQEVLAKQVQTTKEKLETLRQAQSQVEAQFQSGKIGADQYRAFQREVEITQNTLKSYENKLEGVNRALEQNGSSVTSNKSKLAALGAEQNQLASESEKVASSFKLQESQLGRNASESEKLALAQKKVAAQSEIVEKQIANLERQLELTKAEYGENSVEANKLEKSLNETKTAYHHLQNEMGSMSGASDNANHSLAETNNLLRSEILANFSEKLSEISQKLIDFGKATLEAFREVDEGMDIIVTKTGASGKALDEMTDIAKGLATEIPTDFQTVGSAVGELNTQFGLTGDALKDASATLIKYAEINGSDVTESAISAKQAIEAYGLETSDLNRVLDTVTYTAQATGVSVQDLMTKAIQGAPQIKALGLSFDEGVALMGQFEKSGVDSSAALSSLSKAAVNYAAKGKTLSEGLKETVEQIRNSTSETEALTLASSIFGTKAAPRMVDAIKRGALSFDDLAGTAEKAKGVVASTYEATLDPIDQFTLAQNAAKEAMAEVGGAIAETLAPFLQQLVPLLKSVAEWFLNLPEPVREFILVVGGLVTVAGILLPIIVALQAAALALGTTIGGMLAAAAPIVGIVLAVIAAVALLVIGIKELWEHNEAFRTAVTEAWNAIYSAISFIVQQVVDFVMEIWGILVSWWQENHQLIQDTATTVWNAISTVITTIMDLIGPYLTAVWENIKLVVTTAWDIIKTIIETVLNIILSIITLVMQVITGDWSGAWETIKQIVSTVWEGIQSIIGTILNAIWQFIVNSWNGIRDSVSNILSALSSLFSSIWNAIQSTVTGIVQGIASTLSNIWNGILQTISNILNNIFSTVRNIWDGIKNAISGAIDGAKNAVSSAINAIKSLFNFHISWPHIPLPHFSVSGSANPLDWLKGDIPRIGIEWYAKGGILTKPTIFGLNGTNLLVGGEAGREAVLPLNRETLSQIGRGIASTLDALPQITITISDVVIREEADLERLAEHVAGRLADELTRQKQLKGLGI*	hallmark_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0035	shell	direct	high	3116	1.0	GCA_003942385.1_01574
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	28953	29681	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	28954	29682	GCA_003942385_1_8_36	GCA_003942385_1_8_36	+	106663	.	PDB:2X8K_A	Distal-Tail-Protein	MIRHNELVIDGVHTSSFPFKVIVENSPPIVMKSSKTQLLEHRGISGAVMETNKHRNVMELTFKIYVVKPSEEELFQFLTLFSKEQFWLESEQLKTVQLWCYKVLVSKVIKDKHEVYEMEATFQCHPTKFFKDTDSQSFTQNGALRTKGSALAFPKLTIVGNTSTETSFTIGSQVIRLEKIESGETLVMDNNPDKPSFRTLSGKSIKWSGDFLTIDPSKDTTVGVVLETGIQSIRFEIVWGWA*	hallmark_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0036	shell	direct	high	728	0.999	GCA_003942385.1_01575
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	29681	32974	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	29682	32975	GCA_003942385_1_8_37	GCA_003942385_1_8_37	+	106663	.	PDB:3GS9_A	tail-protein	MLYLLDKEVQTVKWNGIPLYEAVSARVKETLNGDFTLTLKYPITDSHLYRLLKVDKLIKAPVPELGEQLFRIKKPVEMDDHVEVLCYHITDDVMQHSIKPIGNSQVGCMTALSSMVQAAKTSLEPFSFTSDITKHRDFNTADTTTLYNVLLDGAHSIVGTWEGELIRDNFSFSIQEHRGENRGVIVTTHQNLKSYKRNRSSQTVVTRIHVHSTFKPDGAKEEKTLTVTVDSPLLDAYPYINEKEFTNNNLKTLEELQKWGESKFYHDKIDREQDAIVIEAYELDGQTVHLADWITLKSRKHHVDVIKQAVSYEYDALTKEYISLTFDDAAKVSSHGSSSNITATAHSILNLVKVSQELMIERALENANRAFDAAFEKQESIVLDGIEKAKAKAEEIAAQTREQIQSSFTAFTKTTESTLQAISQKSEEALGKVGATQQALNNVQEVTNQTTAELNAFQKETLQKMGTFVSKTEVKQTLSGLETTLQQVQGYVSKDGERQERLEQYVRTETANQARTVREQVAKDYVAKASYSEDVKGLNRRFESLQIGGRNYIRHYDFDGLLPLSSNVSEWKFERAPDTNAKSGYYLKATCTKAGNGGFHKPIFDLRGAEWQGKKMVYAADMKASRSVVVRFGFETGGVSTVTLQTEWHRFVHPFTVKFERFWSWVCYSNGWLVGDVLYIRDPQLEDGTIATTPSPAPEDDRQYTETKIASYSQTVEGRISEILQAVNGKTNSSDFQKVQETVNLYSRLIGSKEDSIKHNLAQIVLTDSSYVTKVTDLTQKVSTVQTQLANSWSVQHLTSSGAVLNSLNLLANGVNHIHGRLTHITGQTLIDHAVIKSAMVDKLKTANFESGSVTTAILSAEAVTAEKLKVDDALFNKLSATEAYLRKLFSKQAFISQVQSVTLSANKISGGILTAINRAMEISLNAGQILYYTDQAALKRVLAGYPTQFIKFATGNVDGKGRAGVTVIGSNRYGTESSNDSGFVGIRAWNGYNIDSLDLVGDELSFASSAYDNKDGWVMTTTGKLQLRPSRKQDRRDSTINTGDVWLYLDTSGNYVSLHEVLQRMSNSIGALYEYRASHSEGHPAWWDTRNLVGHL*	hallmark_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0037	shell	direct	high	3293	1.0	GCA_003942385.1_01576
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	32987	33223	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	32988	33224	GCA_003942385_1_8_38	GCA_003942385_1_8_38	+	106663	.	.	hypothetical protein	MNPEEINQALRLTIEELTRKLADEVTSKNLLAIQLTQKEEAYQVLLQKKEELEANLKEATTPLKIDGGKKDGRKGITT*	.	hypothetical_protein	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0038	shell	direct	high	236	0.996	GCA_003942385.1_01577
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	33198	33539	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	33199	33540	GCA_003942385_1_8_39	GCA_003942385_1_8_39	+	106663	.	.	hypothetical protein	MEEKELLPDLSRITEPFDLVAALTYMRENGEFIRCKSEGEDFYMYREVQKRPVIKEGRRQLMEVETVGALTQWGATVPTINLSELFHKNFYIMQFDEKGNPNWSEPHRKENAS*	.	hypothetical_protein	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0039	shell	direct	high	341	0.997	GCA_003942385.1_01578
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	33536	33937	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	33537	33938	GCA_003942385_1_8_40	GCA_003942385_1_8_40	+	106663	.	PFAM:PF05105.11	Bacteriophage-holin	MKQLVFANKVLFSTVGGLLGSVFGDWDGFIFALIVFISIDYISGLMAAVVEKKLSSAVGFRGLFKKVVILMLVAMGQIIDTHILKQGGIIRTAIIFYYLSNEGLSIIENTARIGLPVPEKLKQTLKQLKSEEK*	common_virus_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0040	shell	direct	high	401	0.998	GCA_003942385.1_01579
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	33939	34889	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	33940	34890	GCA_003942385_1_8_41	GCA_003942385_1_8_41	+	106663	.	CDD:cd06523	GH25_PlyB-like-endolysin	MALFGVDISEHNGFIDFDQLKNNVDFVIIRSSWGSFAEDLRARRNASECERVGIPYGFYHYSYARNLGEAQAEVNAFLNFVRQFHPSMPLYIDMEDADGWKANNGGVSWETSTAICRLFCDNVEAAGYWAGVYASLYWFQNMGDLSRYTNWVAQWQVTACSVPTDIWQFTSDGVVGGISGRVDSNYMYRDLRSVYTGQVPEPRSEVPQQATTPASTGTYTVQEGDTLSAIAALYGTSYQELAAINGIANPDLIYPGQVLQVTGSSQAPSSTTYTVESGDTLLAIADMYGTNYQHLAAINGIENPDLIYPGQVLRIE*	common_virus_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0041	shell	direct	high	950	0.999	GCA_003942385.1_01580
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	35031	36254	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	35032	36255	GCA_003942385_1_8_42	GCA_003942385_1_8_42	+	106663	.	PDB:4BQQ_A	Integrase	MKPGKIRVCAYARVSTMTEKQQDSLTNQQSYYNHFYQNKNDVEFIGVYYDQGISGKLAKRPGFQQMLEDCRAGKIDVIHTKSISRFARNTELLLAVSRELKTIQVDIFFEEQNLHTLSNEGEVMLTVLASYAEEELRNMSENQRWAFQNKFQRGELVINTKRFLGYDKDENGELIINPEEAKIVKRIYNLYLSGMGVHVIAKLFNEEKVSTVDGGKWYSSTITNILKNEKYKGDAILQKYYFAEIKAKQRLNQGQVQQYLITDNHEAIVSREDWEAVKKRLKQNRKAKLSIDYNRRYPLSGLLKCEHCGSTLKRQKYYKGKVVWVCSKYIREGKVACIGMRVPDSVVQDWSIHEPTVVKEENIGGKKYYSYSSKENDTSRAEATHSENPNGGLLPSIHRPRRTAIKL*	common_virus_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0042	shell	direct	high	1223	0.999	GCA_003942385.1_01581
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	36199	37506	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	36200	37507	GCA_003942385_1_8_43	GCA_003942385_1_8_43	+	106663	.	PDB:4BQQ_A	Integrase	MAAYCRVSTDQDEQLSSYENQVRYYKEYIQQNPLYELVDIYADEGISGTNTKKRTEFNRLIADCRKGKVDRIIVKSISRFSRNTLDCLKYVRELKELGIGITFEKENIDSLDAKGEVLLTILSSLAQDESRSISENATWGIRKKFERGEIRVNTTKFVGYDKGENGNLIINEEQAKIVRRIFRDFLQGETPESIARSLKEEGVPGWNGKANWYPTTIQRMLQNEKYMGDALLQKTYTVDFLTKKRSENQGQVNQYYIEGNHEAIINKEEWDLVQLEVERRNQYRQDNHVNFYIIQCEQNPFTCKVFCKECGGLFGRKNWTTSRGKRPVWQCNNRYKVKGIQGCTNRHIDEETLQQAFLRAIEVLHEKKEQLLEKWNSLNEEQKLEKYHAAQLKGLLDSEQEVFDGRKMCQVLEKIMLGEDGSITVKFLEGTEVNL*	common_virus_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0043	shell	direct	high	1307	0.999	GCA_003942385.1_01582
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	37533	37628	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	37534	37629	GCA_003942385_1_8_44	GCA_003942385_1_8_44	+	106663	.	.	hypothetical protein	MLWPFYFLKYDLLSIMISVAIELTIIFKKLT*	.	hypothetical_protein	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0044	.	unmatched_CDS	none	0	0	.
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	37695	38069	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	37696	38070	GCA_003942385_1_8_45	GCA_003942385_1_8_45	+	106663	.	PFAM:PF10078.8	transcriptional-regulator	MITEYGKFLRKLRIDQGQILKTMAEKLGVSSAFLSAVENGKKKIPRTWEEKLVKEYKLDGEQLAELRRSQQDSQQLIEINLEMLTDAQKDTAFAFARSLERFDTQDLSKLAKFFNKNSEEVNDL*	phrogs_hmm	hypothetical_protein	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0045	cloud	direct	high	374	0.997	GCA_003942385.1_01583
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	38059	38589	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	38060	38590	GCA_003942385_1_8_46	GCA_003942385_1_8_46	+	106663	.	PDB:3DTE_A	IrrE-protein	MTYNYKVVPCSRLEIRNYADYFRDKTKLSNELAYPIVEVFELLAETGYYDYEIVPIEDMPNNYGETLKGENLIRIREDIYEKACEDDGFSRSTIAHELLHFFKHRQEEIVFCRTVEEMKSRKAYEDPEWQANCFAGELLVPKRLVKNLSVEEVVEQCKVTQAMASFQLGQYEKEGW*	common_virus_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0046	cloud	direct	high	530	0.998	GCA_003942385.1_01584
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	38705	39373	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	38706	39374	GCA_003942385_1_8_47	GCA_003942385_1_8_47	+	106663	.	PFAM:PF14386.5	nuclease	MVKIQGNRKGCKDVFNAFLVKDAAYAGKEEIPIIRPYNGNLPEKMVLFSKRHQTKEKFSWLCFYEDDYKFENIWKNPKLHLDTLSKFKGVILPDFSLFRDMPYNMQVNNIYRSRAIGTWLQSMGIPVIPNIRWGDERTYDIACLGISKDNVISVGSHGQMRDLDDRRHFINGLDYVVDKLSPHTILVYGALLDDVFAWYRLQGINILHYPSNTSLAYMQGGA*	phrogs_hmm	common_virus	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0047	cloud	direct	high	668	0.999	GCA_003942385.1_01585
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	39373	39705	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	39374	39706	GCA_003942385_1_8_48	GCA_003942385_1_8_48	+	106663	.	.	hypothetical protein	MGTGFHGGFGKTTGAEELDLKRFDNLGGFPIFELINHTNPSTETDGFFVELIADYNGYNKGLVGIVLSKDSNDTYKVKFFTRENKVLVIISVPRLLLHHISHSEFKKYFE*	.	hypothetical_protein	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0048	cloud	direct	high	332	0.997	GCA_003942385.1_01586
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	39765	40730	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	39766	40731	GCA_003942385_1_8_49	GCA_003942385_1_8_49	+	106663	.	PF14280.6	Domain of unknown function (DUF4365)	MANSTERIGIYECGKIAERNNWLFREQPINDIGIDAHMELIEEGKPKQLLALQIKSGESWFKEKKDGCIIFRDINERQYNYWTMNSLPCILVLYNPTDEMCIWGKLNTETIQKTRNGEGKGYYVKVPCSQIFLDDSSNRKILSYTNLPQHLQNYNFLLSQKKFMEIIESGGEVKLHSTEWVNKSSGKGETKLIVNDGDETKEYLYPYWFPFTPYEEVFPKLFPWANFSVDEEFFEESDSELWQQLHCWYDNEMDDWIVVGDTFEQFRQKLHPMRYVDHAGEVAEYMLVLSLNELGKSFLEVEQFISETRPYTKARPESKDK*	hhsuite_tools	nonviral_gene	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0049	cloud	direct	high	965	0.999	GCA_003942385.1_01587
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	40743	41141	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	40744	41142	GCA_003942385_1_8_50	GCA_003942385_1_8_50	+	106663	.	.	hypothetical protein	MKKLKLNSGMKSEKTIDGYRLNPTEKYVINLEDEMEFAISTMQAVHMFGFPPAFKNWHAWLFENGFSMETPNPTNKFVAKFYGVEPLWKTPYSMGLVVKAEGYDDYYIIMECSSKNTGFKHTQIILTMGGCL*	.	hypothetical_protein	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0050	cloud	direct	high	398	0.997	GCA_003942385.1_01588
GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote	cenote	CDS	41205	41330	GCA_003942385.1	RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385.1_RJMT01000008.1	GCA_003942385.1|RJMT01000008.1	GCA_003942385_1_8	GCA_003942385_1_8@C0	41206	41331	GCA_003942385_1_8_51	GCA_003942385_1_8_51	-	106663	.	.	hypothetical protein	MGGASASTSLIPQLVQAVIPPQHVLMVTTYTMKRNKGCLIN*	.	hypothetical_protein	C0	41331	0	41331	GCA_003942385.1|RJMT01000008.1@region_1_41331@tool_cenote_CDS_0051	.	unmatched_CDS	none	0	0	.