core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	22266	23288	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	1	1023	GCA_003943245_1_2_17	GCA_003943245_1_2_17	+	136718	.	3JC9_Cb	PilA, PilC, PilN, PilO, PilM	MQQDISILSKQKQKKLGTSKQKQVIELFNNLFSSGFHLAETVDFLGRSALLEQNYVQQMRHGLANGQAFSEIMASLGFSDAVVTQLSLAELHGNLSLALLKIEEYLDNLAKVKKKLIEVATYPMMLLGFLVLIMMGLRNYLLPQLSSQNFATQLIGHLPTIFLLSVLMLLGLTGAIYLIFKGQKRIPVYSFLARLPFVGSFVKIYLTAYYAREWGNMIGQGLELSQIFQIMQEQRSVLFQEIGQDLGQALQNGQEFSDKIASYPFFKKELSLIIEYGEVKSKLGSELEIYALKTWEEFFGRVNRTMNLIQPLVFVFVALMIVLLYAAMLLPLYQNMEVHL*	hhsuite_tools	nonviral_gene	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0001	persistent	direct	high	1022	0.999	GCA_003943245.1_00176
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	23352	24794	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	1087	2529	GCA_003943245_1_2_18	GCA_003943245_1_2_18	-	136718	.	PDB:4BQQ_A	Integrase	MQTINKVAIYVRVSTTNQAEEGYSIDEQKDKLKSYCQIKDWNVYKVYTDGGFSGSNTERPALEKLIKDAKNKKFDTVLVYKLDRLSRSQKDTLYLIEEIFIKNGIEFLSLQENFDTSTPFGKAMIGLLAVFAQLEREQIKERMQLGKLGRAKSGKSMMWARTSYGYDYHRETGAMTINELEAIAIRDIFESYLNGMSVTKIRDMLNDKYPKTPNWHYRIVRGILANPVYCGYNQYKGHVFLGNHEPIITEEAFNKTQEELKIRQQTALEKFNPRPFRAKYMLSGIAQCGYCGAPLSITLGTIRKDGTRNIRYQCKNRFPRATKGVTVYNDNKKCDSGFYEKSDIEQYVIEQICKLQHDKKYVEELFADHGPSVDRVACQKQIDLLTNKISRLNDLYIDDRITLEELQTKSSEFSSQRAILEEELENDPALKRKKREAEMKKILRTGDILGMDYERQKTIVRSLINKVRVTVDKIVIKWKI*	common_virus_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0002	cloud	direct	high	1442	0.999	GCA_003943245.1_00177
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	24936	25532	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	2671	3267	GCA_003943245_1_2_19	GCA_003943245_1_2_19	-	136718	.	PFAM:PF07467.10	beta-lactamase-inhibitor-protein-BLIP	MKQERKVLGILTIIFGAIALLGSWMPIINNFSFILAILALILGIIGLFINKKRPKTLAIIGTVLSVVSIAIVLASQAMYAKSLDKVGKDVEQAVSSASSSIESSQKEEDAKFNWTKEQFDALQVGDMINYGAGGTSYDEVASVHGEPNNVTTSSVNDHDSKTVSYTSTGSKLKSVILSFSKQDDGSFLLTSKVSSGLE*	phrogs_hmm	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0003	cloud	direct	high	596	0.998	GCA_003943245.1_00178
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	25584	26333	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	3319	4068	GCA_003943245_1_2_20	GCA_003943245_1_2_20	-	136718	.	PDB:2FJR_A	Repressor-protein-CI	MRTNDEIISLIQENIDEKGLSMSELARRVGIAKSTMSRYFNKTREFPLNRADDFARALNITPEYLLGIQKESDVDKTEIISIYNKLEQPRQEKVLDFAKGQLEEQEKPEVVSIFDKLKAEEEENYITDYVEGLVAAGHGTFQEDNLHMEVRLRANDVPSEYDTIAKVAGDSMEPLIEDNDLLFIKITSQVDVNDIGIFQVNGKNFVKKLKRDYDGSWYLQSLNSGYEEIHLTENDDIRTIGEVVDIYKV*	common_virus_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0004	cloud	direct	high	749	0.999	GCA_003943245.1_00179
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	26518	26757	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	4253	4492	GCA_003943245_1_2_21	GCA_003943245_1_2_21	+	136718	.	PFAM:PF13744.5	transcriptional-repressor	MTINLKRLKAERIASGMTQDEVAHRMGWKTRTPYAKRENGIVSIGADELAKITLIFGLPMEKITIFFDDVVPEREQLLA*	phrogs_hmm	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0005	cloud	direct	high	239	0.996	GCA_003943245.1_00180
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	26773	26913	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	4508	4648	GCA_003943245_1_2_22	GCA_003943245_1_2_22	+	136718	.	.	hypothetical protein	MIRIEIENLSDFIESAKEVVKKTEELEVAVQRLNEMEFELKAKTTN*	.	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0006	cloud	direct	high	140	0.993	GCA_003943245.1_00181
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	26937	27080	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	4672	4815	GCA_003943245_1_2_23	GCA_003943245_1_2_23	+	136718	.	.	hypothetical protein	MIHHYITHYASNGKDYAEAWIQINIFGMCFCLWKKRTTIERLYADED*	.	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0007	cloud	direct	high	143	0.993	GCA_003943245.1_00182
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	27077	27244	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	4812	4979	GCA_003943245_1_2_24	GCA_003943245_1_2_24	-	136718	.	pfam14168	YjzC-like protein. The YjzC-like protein family includes the B. subtilis YjzC protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length.	MSKAPIKPGTDNQKPGYYVEVGPRGGKVTNGHTATIGKGDRLPPTSAKGNGWKKV*	mmseqs_cdd	nonviral_gene	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0008	cloud	direct	high	167	0.994	GCA_003943245.1_00183
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	27408	27596	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	5143	5331	GCA_003943245_1_2_25	GCA_003943245_1_2_25	+	136718	.	PFAM:PF10078.8	transcriptional-regulator	MLWETISKKLSEKNWTIYKLCLEAGIGTAGIYRLRDGVIKDLQFETVKKIANALNMSLEEFR*	phrogs_hmm	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0009	cloud	direct	high	188	0.995	GCA_003943245.1_00184
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	27610	28476	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	5345	6211	GCA_003943245_1_2_26	GCA_003943245_1_2_26	+	136718	.	PF03677.13	Uncharacterised protein family (UPF0137)	MNEIALSNNLSQIELEINHHKNIAGQSIWEIGRRLNHVKENDLAHGEFRNWHERLGLDKDFAYKSMKIAKELPNVETLRHLGTTALHLIATLPEEERKHQINRIEQGDSLTVRELQTIKKKYSKALGRIAELEASEPQPKEVVKEVIKEVRVTPPDYQEAIQKARESEAYAERNAFLEQQLNQMSEQRDKANKYDDIERAIEQGRGQLNEQQKEIASTKEAIAFLKKGNQFLANFGGVAYLDIQSVLPKNAQLRVEVETFASQLKILLDDVNTILGQSRNEILEGEIL*	hhsuite_tools	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0010	cloud	direct	high	866	0.999	GCA_003943245.1_00185
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	28473	28877	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	6208	6612	GCA_003943245_1_2_27	GCA_003943245_1_2_27	+	136718	.	pfam10552	ORF6C domain. This domain was identified by Iyer and colleagues.	MTQEIVGQSRDHQNQLKEIGVMRKMLDSIENHEERITNLEDTMRVNAVQETVLTEEVNKIVVGFLNGKQAPAYQDRSIRGRAYSSINKDIRKQFGVRRKEIPAKDYQNAVVFIRQWQPDFELRQEIQTANAIRA*	mmseqs_cdd	nonviral_gene	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0011	cloud	direct	high	404	0.998	GCA_003943245.1_00186
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	28934	29086	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	6669	6821	GCA_003943245_1_2_28	GCA_003943245_1_2_28	+	136718	.	.	hypothetical protein	MNRQKKQWKPRIINIMADGTEIEDLTGYIIPAGHQYYRIIKSINTKENQA*	.	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0012	cloud	direct	high	152	0.993	GCA_003943245.1_00187
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	29083	29310	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	6818	7045	GCA_003943245_1_2_29	GCA_003943245_1_2_29	+	136718	.	.	hypothetical protein	MSIIKSIKNYFNTEEPETVVTLPNETEKWKALAIEVNRDVMAIRRKYKAVVEECNRLTKLVEIYQEILERKDNEI*	.	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0013	cloud	direct	high	227	0.996	GCA_003943245.1_00188
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	29312	29677	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	7047	7412	GCA_003943245_1_2_30	GCA_003943245_1_2_30	+	136718	.	PFAM:PF07261.10	DNA-polymerase-B	MQYIFRNTNENYTQLNNHSIQNNQLSLQAKGLLLVLLSNKETWKPYIDELSKRSKNGRDSHRTAFEELKDAGYIRIYRKSFGRGKGIQNYPLVQDVPISDDFWKYWTSSLEKELSTGEDED*	rep_hall_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0014	cloud	direct	high	365	0.997	GCA_003943245.1_00189
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	29919	30206	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	7654	7941	GCA_003943245_1_2_31	GCA_003943245_1_2_31	+	136718	.	.	hypothetical protein	MTNIFKAIKTIKRIKTLQKELHDSSLAYMLAQDIGFFPENKKGRIKAEAMHDFSHILKDVLDGKSLDEATDILLKDKEDEDEEEEQEEQEEDGTV*	.	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0015	cloud	direct	high	287	0.997	GCA_003943245.1_00190
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	30193	30315	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	7928	8050	GCA_003943245_1_2_32	GCA_003943245_1_2_32	+	136718	.	.	hypothetical protein	MGPFDYDRWLSTPPEPYREPEENEDEAYDSWIDRQLCEMD*	.	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0016	cloud	direct	high	122	0.992	GCA_003943245.1_00191
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	30330	30563	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	8065	8298	GCA_003943245_1_2_33	GCA_003943245_1_2_33	+	136718	.	.	hypothetical protein	MTNIPTNKGRSYIRIELSPKQKELIGVLAELEGSTSGDLLNRVVERFIDNNLRLIDDYRNSLDDLKQKSRLRLTMKV*	.	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0017	cloud	direct	high	233	0.996	GCA_003943245.1_00192
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	30575	31345	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	8310	9080	GCA_003943245_1_2_34	GCA_003943245_1_2_34	+	136718	.	PFAM:PF03837.13	RecT-protein	MTNNQVATKTTGDFLTNPQLLSAKIVRQYLDPSGKANDEELAYFIATCKERNLNPFTKEVYFIKYGTNPAQVVVSKDAFMKRAEQNPNFDGFEAGIVVETQEGEIKHITGTIHSKNHVLLGGWAKVYRKDRKYPIEVDADFKAYNTGKSMWAKMPALMIRKVALVSAMREAFSENVGGLYTTDEMDQSQPIDVTPQESREDVLARKQAQIEQFNKEQEQQQQKREAEPVEVKEEPENPLQETDPMQADPLGNSLNY*	common_virus_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0018	cloud	direct	high	770	0.999	GCA_003943245.1_00193
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	31360	32397	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	9095	10132	GCA_003943245_1_2_35	GCA_003943245_1_2_35	+	136718	.	PF07083.11	Protein of unknown function (DUF1351)	MQELQAKVTQAQVEIIGREKFEQNINEVVAKYQNYVVTASTIKDDKKVLADLRKLSKQISDERIKIKRELSKSADEFDEYIKATEKPLTDTIFKIAKDVKDFEDHQKAMRLDTVKSYIANKSAEYMLDPRIFDEKALEYIKAGDFMADGVTLKKAAMQSLDDLVTFEYQKQQEFEKAKSAISGQCAEYGMTDQPYLRMLRDLTLVEVLEQIKADYAFEKQKEEVRLAQERAEREQQEILAKEQAKQEADALIRQKMTQIDPETGEILDGGELSQNQKEIVVGAENGLKKYTQKMILEVYFEGTEDKDRFKNGLSQLGFDYKTNYIVKGYQNIEPLTQEELDNQWK*	hhsuite_tools	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0019	cloud	direct	high	1037	0.999	GCA_003943245.1_00194
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	32407	32508	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	10142	10243	GCA_003943245_1_2_36	GCA_003943245_1_2_36	+	136718	.	PFAM:PF00436.24	single-strand-DNA-binding-protein	MFDFIREVGMALVWFFLGYLVGERNNNNNNDKE*	phrogs_hmm	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0020	cloud	direct	high	101	0.99	GCA_003943245.1_00195
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	32721	33074	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	10456	10809	GCA_003943245_1_2_37	GCA_003943245_1_2_37	+	136718	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MTYELEEMKTWRRKCTDLIAEECLLDKVAEGPIRLSVVFYISPPEYIKKIKKNQQALADELMPVYRKPDLDNYIKALLDSISDSSLLWKDDGQVSELHAKKVYSLNPRIEVEIEDLK*	common_virus_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0021	cloud	direct	high	353	0.997	GCA_003943245.1_00196
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	33071	33253	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	10806	10988	GCA_003943245_1_2_38	GCA_003943245_1_2_38	+	136718	.	.	hypothetical protein	MKVKGIITKVPTINFGECEIHAVPERIKRLFPDQNLVKITENGKSYILNTDYIVLIFTKD*	.	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0022	shell	direct	high	182	0.995	GCA_003943245.1_00197
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	33297	33752	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	11032	11487	GCA_003943245_1_2_39	GCA_003943245_1_2_39	+	136718	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MSKKELVKALMERMQKFGYFPSFTNVKVFIQEYEKMAEPGPTRPVVPEYIAEWIGYCKMRKISLAHALYRSDESVDERVFRWVVDSLDNQETFAKAWIFGYEIEEEKRYLVKIKLGSFGELRKHHTRKELEEAGFGEVFNSPLFEVEEVEE*	mmseqs_cdd	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0023	cloud	direct	high	455	0.998	GCA_003943245.1_00198
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	33749	33913	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	11484	11648	GCA_003943245_1_2_40	GCA_003943245_1_2_40	+	136718	.	.	hypothetical protein	MKNKNNSEIWVKGYLDENGDIIISLGDDGYHRVLRDYVDSGLIECKKIEIEEVV*	.	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0024	cloud	direct	high	164	0.994	GCA_003943245.1_00199
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	33913	34050	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	11648	11785	GCA_003943245_1_2_41	GCA_003943245_1_2_41	+	136718	.	.	hypothetical protein	MEEIIMAFLPNEELNRLIKIEIAVENLIENGILDEDVFNQYLKEA*	.	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0025	cloud	direct	high	137	0.993	GCA_003943245.1_00200
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	34068	34166	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	11803	11901	GCA_003943245_1_2_42	GCA_003943245_1_2_42	+	136718	.	.	hypothetical protein	MTVEHFLKSLSELLWTSYWTVIIYMLLKNNKD*	.	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0026	cloud	direct	moderate	98	0.99	GCA_003943245.1_00201
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	34309	34647	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	12044	12382	GCA_003943245_1_2_43	GCA_003943245_1_2_43	+	136718	.	.	hypothetical protein	MKDLMFWGMFIACLLISAMTIYIMYSQAMVNRDLERKYQDLKNEFLHVFGWDQYEWARNFRDYARKVEELIKFKKEIERLEVIKKALDAKNLEDLQKKKEQVEREIERLERN*	.	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0027	cloud	direct	high	338	0.997	GCA_003943245.1_00203
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	34659	35036	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	12394	12771	GCA_003943245_1_2_44	GCA_003943245_1_2_44	+	136718	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MITRFRAWLKNDKEMIDVDEIHFDNGQLDFIGDAITFMREADEIELMQSTGLFDKNGQEVFVGDIIKCTRGCPHEVYLEKEYGGTYVGGMPAIYLKGIREGYAWTGDEEIIGNVYQNPDLLEVIK*	mmseqs_cdd	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0028	cloud	direct	high	377	0.997	GCA_003943245.1_00204
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	35033	35458	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	12768	13193	GCA_003943245_1_2_45	GCA_003943245_1_2_45	+	136718	.	PF09643.10	YopX protein	MIYPYRGLSIDENSKGQWQYGYLIEDHGEAFIINEVIEANEQYITIGSWCPVNNESVGRFTGLFDDKLVEIYEKDILRTKNGLLIGVVEYREDLAMWTNSLISYNNFERLCNVASSREIIGNVYQNNELLNELLEVTNDRD*	hhsuite_tools	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0029	cloud	direct	high	425	0.998	GCA_003943245.1_00205
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	35445	35720	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	13180	13455	GCA_003943245_1_2_46	GCA_003943245_1_2_46	+	136718	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MTEIKLIFFIASCLVSFYAGAVLSKPKQPIIIYQVDNAGAETHGYITNKEIIDGRYTVTAGAYGKFLVSADQYNQLEIGDEIPDFLKKRGN*	mmseqs_cdd	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0030	shell	direct	high	275	0.996	GCA_003943245.1_00206
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	35721	35888	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	13456	13623	GCA_003943245_1_2_47	GCA_003943245_1_2_47	+	136718	.	.	hypothetical protein	MRIKAFSGAIIKVDKMKRSITIDGREYKADCRAYAKDNEDGTGTITLIFDGKLIK*	.	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0031	cloud	direct	high	167	0.994	GCA_003943245.1_00207
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	35885	36100	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	13620	13835	GCA_003943245_1_2_48	GCA_003943245_1_2_48	+	136718	.	.	hypothetical protein	MTSKLESRIEQLEHTKECYLKDLEPESLAIIKNSFGLQVASKRRDWLKGKVKECDEEIACLKRDLSRSCQK*	.	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0032	cloud	ambiguous	low	39	0.181	GCA_003943245.1_00208
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	36061	36501	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	13796	14236	GCA_003943245_1_2_49	GCA_003943245_1_2_49	+	136718	.	PFAM:PF05263.10	transcriptional-activator	MLEERPIPLLPEIDERATIQKAKDKLKEYPVWREIACDEPIQRITQDFTFEPRGGGGPSRQVENLAVHRVDAYAELEEIEQAISRLINPTYRFILHSRFTKTTPETAVAIYDRLDIEKTRYQELLDRALVAFAWQYRNGILICEKR*	phrogs_hmm	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0033	cloud	direct	high	440	0.998	GCA_003943245.1_00208
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	36947	37477	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	14682	15212	GCA_003943245_1_2_50	GCA_003943245_1_2_50	+	136718	.	PFAM:PF03592.15	Terminase-small-subunit	MNDREKLAIEELKTIANDLMSDWPASRNRQKSFILNYMANGFQNGTQSAKEAGFSERSAGKIAHNMLAGMEKYVHIPPVVETLKKAFDERRTELSLLTSVDIQQFWAKIIRREIQDVKLVGDGEGYQIAKEVPPDLTVMLSASDKYAKTLGMYQNNIDITQKTIEIKVGEWDADEE*	hallmark_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0034	cloud	direct	high	530	0.998	GCA_003943245.1_00209
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	37461	38750	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	15196	16485	GCA_003943245_1_2_51	GCA_003943245_1_2_51	+	136718	.	PDB:5OE8_A	Large-Terminase	MLTKSRPKIEIVIDYPSRVFNKHIYDKLTDYSTFTEVHYGGASSGKSHGVIQKVVFKACQDWKYPRKVLFLRKVGSTVYDSIFEDVKQCLDAWGLLDKCKVNNSAYRIELPNGAQFIFKGLDNPEKIKSIKGVSDIVMEEASEFTLDDYTQLTLRVRDKKHKQKQIFLMFNPVSKVNWTYNAFFVKSPKNTVVYHTSYKDNRFLDKTTIENIEELANRNEAYYKIYALGEFATLDKLVFPKYEKRLLNRDELAHLPAYFGLDYGFINDPSALMHVRIDDENRKLYVLEEFVRKNLTNDKIAESIKALGYAKEEIRADSAEKKSNQELRNLGIPRVIDVQKGPGSVMQGIQYLLQYDWIVDERCVKLIEELENYTWKKDKKTNEYINEPVDSYNHCIDAIRYALQDRIYQTKKDMNVDKTISKINKMFRR*	hallmark_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0035	cloud	direct	high	1289	0.999	GCA_003943245.1_00210
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	38753	40234	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	16488	17969	GCA_003943245_1_2_52	GCA_003943245_1_2_52	+	136718	.	PDB:5A20_A	Portal-Protein	MDKVNEFEHGIDNVTKTRFDSLYFGTLSNEQFRYTSADELLNTDAGRKALRNMIQTFFDSQKKRLKVLASYAKGDNYSILSGHRRLDNEKADYRVRHKWGGYISGFATSYVIGNPVTIGVLEGANMGQLKTIEEIEWQNDINALNGDLAFDASVYGRAFEYHFRDRDNVDRVVLISPLEMFVIRDLTVEQNIICAVHLPIFADKVNMTVYTKDQTIAFKPFSEGSIRLAMAEVNKHQYNDVPVVEWWNNRFRMGDYESEISLIDAYDAGQSDTANYMSDLNDAMLLIKGDLEAIGASAENVAKMKDANTLLLQTGISANGQQTTADAGYIYKQYDVQGTEAYKNRLANDIQKFSRIPNLEDDHFNSTSSGIALLYKMIGLEQVRKDKEIYYTKALRRRYELISNVHKAINGSIIEANKLTFTFHPNIPQDVWTEIKAYIEAGGALSQETLMNNASFTDYKTEQSRILKEQGASDGEISQIVGSQDDEQPDEEE*	hallmark_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0036	cloud	direct	high	1481	0.999	GCA_003943245.1_00211
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	40206	41174	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	17941	18909	GCA_003943245_1_2_53	GCA_003943245_1_2_53	+	136718	.	PFAM:PF06152.10	minor-capsid-protein	MTNSQTKRNNKLYNAERKAQAELIKRDIERDKLLSSLYKESYDRLQSEIDRFYMTYAGKEGLTKQEAMKRASEFDVTKFNDKARQAVKTRDFSNKTNSMLRTYNLKMKVSRLELLKAELALEMQNLTADVNQVFDKARADEFLNEYKRQAGILGVSSSGAEKRMKSILDADFYGQNFSSRVWGRTGLHANLQRDVFSSLNRIYTDMMGYKQEAKLLANRYGTSKENAKRLLKTEIARINADTQLAMLKDNGFTHMIYVAEPGACDICGPLDRKAIPIDKVEKGVNMFPMHPNCRCSAYGHIKMKYKSGGSTLDDYDYTEEDE*	hallmark_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0037	cloud	direct	high	968	0.999	GCA_003943245.1_00212
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	41201	41413	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	18936	19148	GCA_003943245_1_2_54	GCA_003943245_1_2_54	+	136718	.	.	hypothetical protein	MEDWKERFKKEYYELRERFQKLDMMIGQYEKGQLEFEPKCPIDLLKRQRSVMWDYLSTLEQRAKIEEIKL*	.	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0038	cloud	direct	high	212	0.995	GCA_003943245.1_00213
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	41531	42130	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	19266	19865	GCA_003943245_1_2_55	GCA_003943245_1_2_55	+	136718	.	PDB:6B0X_d	Major-Capsid-Protein	MAKYKSMLRMNLRNLQLFAEGAEPQAESGAPESEVPAGPTPEPEKMVSVAEMQRRLEQAEKKHAQSTQEAISKALEQYKAENELSGKELEEYRRQVAEAEKQELLDKIAGLEKEQTKRELTEEAIKTLSSRKLPVSDKVLAFVVKDTADGTLQAIADFEGIISEIKAEYTQSEPPAVSSSFGDSGAKSSGDIFRNSRII*	hallmark_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0039	cloud	direct	high	599	0.998	GCA_003943245.1_00214
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	42146	43039	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	19881	20774	GCA_003943245_1_2_56	GCA_003943245_1_2_56	+	136718	.	PDB:6B23_B	Major-Capsid-Protein	MTVQTFNPQKVLVSEKPDGTLHKEFTDIIMKEVAENSLVMQLGKYHEMDGKQEKTVYVQTDGVSAYWVNETETIKTDKPEVVPVTLRAHKLGIILVASREVLNYTWEKFFEDMKPQIVEAFYTKIDEAGLLGHETPFANSVAKSAKDASKVIGGPVTYENILKLEDKLLDDDIEINAFVSRVSNRSALRDARDGDKKTIYDKDTNKLDGTVVVDMKSKQFKKGDLLAGNFDNLIYGVPYNINYKISEDGQISTIKNADGTPINLFEQEMVAIRCTMDIAVMITKTNAFAKLTDASNV*	hallmark_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0040	cloud	direct	high	893	0.999	GCA_003943245.1_00215
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	43058	43387	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	20793	21122	GCA_003943245_1_2_57	GCA_003943245_1_2_57	+	136718	.	PFAM:PF08198.10	Arc-like-repressor	MAYIVTRNIIDTKDNNRFYEEGDFYPRSDFSVSDDRISELLGKGVIAKEGNKPAPAPEVTEAPVEEAEKPIDKLKIAELKEQLDAQGISYDADAKKADLVALLQGNKEG*	phrogs_hmm	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0041	cloud	direct	high	329	0.997	GCA_003943245.1_00216
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	43391	43738	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	21126	21473	GCA_003943245_1_2_58	GCA_003943245_1_2_58	+	136718	.	PFAM:PF05135.12	head-tail-adaptor	MEETQLAKIKRRLGIDPADNLENDLLNDLIDDAESYFKALVGTSEIASKYNFMIENVVYKLYGRKGSESVTSETVDGYSVTYQEWDNLFKPYMAILNKDFGLDGSQRQRGKATFL*	phrogs_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0042	cloud	direct	high	347	0.997	GCA_003943245.1_00217
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	43735	44046	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	21470	21781	GCA_003943245_1_2_59	GCA_003943245_1_2_59	+	136718	.	PDB:2KZ4_A	head-closure-knob	MKTPNRITLIRGEREKYNPEKDIYESKGQSTKPVPCLVNKVSQSKVFELYGNRTDVIISCRFQQEQAPFRQAIFENAVYEPIEAIDAPIKGAVRLKKVGPNGI*	hallmark_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0043	cloud	direct	high	311	0.997	GCA_003943245.1_00218
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	44036	44386	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	21771	22121	GCA_003943245_1_2_60	GCA_003943245_1_2_60	+	136718	.	PFAM:PF04883.11	type-I-neck-protein	MGFDIKWQGLEKLTMTIYNAHPNAVKQSIEVLKNHAERGKSIAKSKAPVDTGFLKSNIKTSYHGMEAHINAEAGYSGYQEYGTRYQSGKPFMRPMLQEVQPQFQEDMTKVMKGVFQ*	hallmark_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0044	cloud	direct	high	350	0.997	GCA_003943245.1_00219
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	44383	44772	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	22118	22507	GCA_003943245_1_2_61	GCA_003943245_1_2_61	+	136718	.	PDB:4ACV_B	Antigen-protein	MTPNHELFRLIYQMAEKREKTFDFLPNAGTQYPFIYIGENSAQEAQNRDLFGIVNQTVHIYAKTSQRATLDDISAYLETMVKSISGKWEYHLQHTTTNKQVIPDNTDVQPLLHVVLDFAFNFTKKEKDK*	common_virus_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0045	cloud	direct	high	389	0.997	GCA_003943245.1_00220
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	44772	45317	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	22507	23052	GCA_003943245_1_2_62	GCA_003943245_1_2_62	+	136718	.	PDB:5A21_H	major-tail-protein	MADLIQGKDYIAFFRRLKDRTKQDAGKVRFQTELTLNAEKEVETTKTKDGVVNSVSDGETSGECTSLAYREDKDTVNMWKEMRKWFRNTDKIEVWIVDLGSKKTEGGKDKYDVEYYQGYFKNFEISAPADDKVELTYEIAIDGNGIIHTDELTASQKLALEATQYEYHTLAKEEAKPGEEV*	hallmark_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0046	cloud	direct	high	545	0.998	GCA_003943245.1_00221
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	45369	45710	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	23104	23445	GCA_003943245_1_2_63	GCA_003943245_1_2_63	+	136718	.	PFAM:PF12363.7	tail-assembly-chaperone-protein	MILNIGGREYTLRFGIGFLREMNKLHSVEMEGMKTGYGAMTMFNAGQSLNDPLAFIDVIKAGTVTEAQKPSNEAIEAYLEDLVVNDKYDETINAIVDELKASPLLKKAMNLTE*	hallmark_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0047	cloud	direct	high	341	0.997	GCA_003943245.1_00222
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	45782	46099	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	23517	23834	GCA_003943245_1_2_64	GCA_003943245_1_2_64	+	136718	.	PFAM:PF12363.7	tail-assembly-chaperone	MSFKEAMRTTLEEFEIYNMAYAIRQEDKRLNSAIQAWFNQSVKAQKGRGKSARPAFKTFEEFYNHKEEFEKIFRKNQPEKEAIPARRLDMAERNRLINHAKKGGS*	phrogs_hmm	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0048	cloud	direct	high	317	0.997	GCA_003943245.1_00223
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	46099	49059	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	23834	26794	GCA_003943245_1_2_65	GCA_003943245_1_2_65	+	136718	.	UniProtKB:R2PRN9_9ENTE	tail-tape-measure-protein-	MGVSFDVSAILKANVSDFARGMKEAQASLQSLKNQTGSSLEKLSGTLNNVGGAMMKVGAGMTAGFTLPVVGAIGGVVKSFAGLEQAIGGIETMFQGSANTVIKNSETAYKRAGVSGVKYMEQVTSFSASLLQGLGGDTAQAAKYADMAIVDMSDNANKFGTNITDIQNAYQGFAKDNYTMLDNLKLGYGGTQEEMARLVNESGVMGDSFKATAKNVKDIPFDKLILAIHKTQERLKITGTTAIEASGTVSGSFEAMKASAQNLVAGLGQPGADIKGLMQNLKETVINFKNNIVRVLKTIWDNLPLSPFQKWIGAIVISAGPVLTAFGVITSGVGKLISVFTGIGAIVSKVTSWFALLNSGGSSLSVVFAKIVGAVSSIGAPFLAVVAIVGTLIGVLVGVYKTSEEFRNKVDSAFKAVSSAISAVINEIVSVVKSLFGGLVAWWNENHQLILQTATNIWNAIKAVVETITNAIAPIIEAGWNVIVTIVKNNWDTIKNVVGTVLNAILGIIKAIMQIINGDWSGAWETLKGVAVGIWEGIKSAVGIAIQNLVQVIQAGLELLKEIWTVIWNTLSTVLGPIWEFISNLVTTALQGISDFINATLTVISDTWNTIWNAISSAFSTVWNAIYNTVSTILTNVWNVIQTILNFISEYWGHVWESIKAIFAGILLTIVGLVTGNFDLIKQAIVNAWNVVLEQTQAIWNMILNVLTAIWNGIVSVATSVWEGIKSFFSNTMNAISNIFSSVWNGITSFLSSTMSSISSGISSAWSGITSAIGNFMSNIGSTISNGWNNVVNTVTTAGSNIVNAVKNAFTNAVNGAKSFVSGALSVGKDLILGFVKGVTAFAGKLIDAVGGAVKGAIDWAKGLLGIKSPSRVFKQFGVYTDQGFIIGVNSKAEQVAKSVGSMAQGAINAFTDKDLSGTFQDELSSVDGALGNLTAYDPNVNFDGGTLTVGQQAADIVLKLGNTAYRAFTNDITSQQELELVLDHY*	hallmark_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0049	cloud	direct	high	2960	1.0	GCA_003943245.1_00224
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	49075	49866	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	26810	27601	GCA_003943245_1_2_66	GCA_003943245_1_2_66	+	136718	.	PDB:4DIV_S	Receptor-binding-protein	MYDYASLKKLDNEVATFEPSDNLLINGQPLNRLIEGYRHLTVSGRGILGRDVSTTNVPGRRGVWVDKYSDEERTIEIKYQLLAETSSDMRDKFAKLNKILRTHAQSGFLEISFKDEPDFIYYGYFNGADSFEETSLSIVSKFSLLIPDGYKKKSPQTSTGPISLVDAVEVFPESITVTVSKATDRVQIVNGSKVISFSGSYSAGKDIVILFDPDEVKASYDSRNILSELDRFSPLELFTVRDGDNVTAVNATVKKIVWRDERA*	hallmark_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0050	cloud	direct	high	791	0.999	GCA_003943245.1_00225
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	49863	53942	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	27598	31677	GCA_003943245_1_2_67	GCA_003943245_1_2_67	+	136718	.	PDB:3GUD_A	Neck-appendage-protein	MIYLFDINERLLKAIRKPAIKSALQKYSLTTENYVSERLTSEVKALNDDELELVEYMAIQSIEDPHLFNYFYVAQKSTKDQITTFTGVQSGIEELRKTPVYDKRPKSTQAKPVINELLQGTNWQARYIAETALHSTNFYYTSVFDALKKLCKVWGLEMQFFVEMNGNGIGARYIDFKKKIGEAVGKRVVYGHNALEILQEVERTNIFTAIVGRGKGEQVSSAEESGKGGDGYGRKITFEDVVWSKAKGDPLDKPKGQKYLEIPEMTQRYGIKNSDGSMRPKIGFVDFGEEEDPNELIKLTYQSLITASRPQLTLKTSSVYLKGVKIGDTIRVVRHDRKLDYDTRIFDITINRLNDQSTDTKLGDRIGESSTSKAQSVADKAVDEFINNEFNSFIQDLPDYIRTADGFNTNWYSEEDPTKKYPKKVMINDIWYKPDPEHEGHKIMLRWTGEVWEEILRTYNEVSLREKIDQKFAELKQAMDEQNAVNEQRITDILKKSDLGRLAEDAKKIAESAKSEIDNIKQKSESVGSELTNFKEKVQTELDGKPNLAKVTELINGVKEQFSSVGLRNYVLGTGTPKTAGNTEKIYTFSKDAFGWTPETKLRLSFDYTADESVKKFRIRRSVTYKNGNGQTDDVINQYTTDSLSIDTTAKKSGRYSQPLEWKRYLQPGDNIERIDYYVQIDEGSGNVTIKNMMVSTGTNDPDWVPAIEDQQNMVTQAQAEFERTANGLETRLNAISTNFNPDGSASEKFNKYIEHKTAEGVEKERAEISKGYVAKSTYTEKINEIEQHFNLTDSKVAQFATYKNGLDGQYATITKQLSDNQTAYSEFKRTSDTLVQTFGTSGDQIANNVSRMVLNSQIFQTEVGKYSTSGGPNMLRNSRADDGLKYWTEENGRLSFTAHSFYLNGQKRMFELRPGAVVKSPRFIVKRNTDYTLNILGFDNNSKYFRIYFCKRKKGSTADFEEKQLVFDGRPQWTDGPVFSNVKTVKKSFKFNIGEFDDGYLQFEYDRNNPNKWGGLFMTELDFYEGDNDRKWQPSPEDSAEPIEAVRTQVTQLNNSYSIRNLTNAGDILGQLNLNPDGSIRINEGLLSIGKKTYIEDGVIKGAMIAKAQIDTAHIKEIDASQANIFNLNVNNIVGLNSEFIKAKIEFALVEWLKGKRISAINDKTVFDLNEGTLNLYSNTGTIRRIDDTSSSQFLQFGQAGFIGEYLRDPKSARIVIGTNHDRTENTQNESFAGSRLWSGSKDGVQESLYEFVGDRIIFYSNGRYRSPWIIHNNTQDGSSYLIPGNEKGVRHNLGRGDKHFSGAWIDNIFIGKTAVNLGTYVWDILTCFGQLSKANWDLKNQSFKSHVSGVLSKYGFK*	hallmark_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0051	cloud	direct	high	4079	1.0	GCA_003943245.1_00226
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	53957	54187	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	31692	31922	GCA_003943245_1_2_68	GCA_003943245_1_2_68	+	136718	.	PFAM:PF07106.12	hol-like-chemotaxis	MGEDFQTKAYSALATEIGQKAVTIATLQAQSDIYSKYIEELEAENKRLQEYNKELTEAKDSLQKQLDELKVEGVEQ*	phrogs_hmm	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0052	cloud	direct	high	230	0.996	GCA_003943245.1_00227
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	54184	54810	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	31919	32545	GCA_003943245_1_2_69	GCA_003943245_1_2_69	+	136718	.	PF07104.11	Protein of unknown function (DUF1366)	MRTYAVIGKYPVYDEEGNITHTDVSLNATSGGFDSYTQRVAGDCRNKPDTEVVELAKDAYFKSEYAERAISESVQEIDNLKVKAKERDLKVEEQKKQLETINKLVENNAKLTHVSILNAVMSENIAYGTIYKQYMDLLPVAKAGDTFQADDLFVLEDPKHQELNGEGIKVLIQAQKTFTYNGESIDEFKKGGRLELGTATAWPFVGKG*	hhsuite_tools	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0053	cloud	direct	high	626	0.998	GCA_003943245.1_00228
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	54818	55279	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	32553	33014	GCA_003943245_1_2_70	GCA_003943245_1_2_70	+	136718	.	PFAM:PF05105.11	Bacteriophage-holin	MEVVEPDGIFGIFEVVKDFYAHGIDEHFIVFALMLIVALDIILGVSRAWAYHDFSSRKWRKGLVSHTAMILITAIGYPFALYMNLAPVVDAFIMAMMAAYGSSILASLSALGVEIPGLDHFVKKNIDHEKFQLKEGLEEPSKLIKKKKGESKK*	common_virus_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0054	cloud	direct	high	461	0.998	GCA_003943245.1_00229
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	55276	55605	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	33011	33340	GCA_003943245_1_2_71	GCA_003943245_1_2_71	+	136718	.	PFAM:PF09682.9	Phage-holin	MNQITDIVVSGAMSILVVLVGIVVNSVKQYLLTRGGKKAIETAEILAKNAVQATEQVADKLGINGQDKFEHAKASLIESLEAYNIYLTNDQLNTFIESAVKTANDSWKK*	common_virus_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0055	shell	direct	high	329	0.997	GCA_003943245.1_00230
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	55620	56357	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	33355	34092	GCA_003943245_1_2_72	GCA_003943245_1_2_72	+	136718	.	PDB:5T1Q_D	Adenosylhomocysteinase	MDKVKLFQNEVLGSGFDIDGYFGWQCWDGYAKYCLWLGVPFANCMVSGYVKDLWEQRYNNGILDYFDEVENLEGGEVCIFTENEWTPVSHVAIFVADIDGTQGWFLGQNQGGEAGPNGGGVFNLVAFPYSTLYPTAFRPKGEPLPKKELKEAVTEVMENHEAPFYPEDATFTVGDSPINVRREPSLTGEIVAVYQPGEKVHYDSKGSNDGYRWISYVGESGNRNYLAIGQTDEAGNRIDLWGELS*	common_virus_hmm	common_virus	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0056	shell	direct	high	737	0.999	GCA_003943245.1_00231
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	56843	57031	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	34578	34766	GCA_003943245_1_2_73	GCA_003943245_1_2_73	+	136718	.	PFAM:PF10078.8	transcriptional-regulator	MKADSEKIKWLLDNFSQYEISRATGVAQPSLSNIKSGTRKIENLSLKVASKLTEYAEELKTK*	phrogs_hmm	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0057	shell	direct	high	188	0.995	GCA_003943245.1_00232
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	57872	58195	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	35607	35930	GCA_003943245_1_2_74	GCA_003943245_1_2_74	+	136718	.	6TXT_A	Competence pilin-like protein ComGC	MQEFFLWEQSTILETSIEMLVVLLIISVLMLLFVPNLTKQKEAVSDTGNAAVVKVVESQAELYELKNTGDQATLSKLVAAGNISQKQADSYKAYYGKNNSETQAVAN*	hhsuite_tools	nonviral_gene	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0058	persistent	direct	high	323	0.997	GCA_003943245.1_00234
GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote	cenote	CDS	58155	58583	GCA_003943245.1	RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245.1_RJOY01000002.1	GCA_003943245.1|RJOY01000002.1	GCA_003943245_1_2	GCA_003943245_1_2@C1	35890	36318	GCA_003943245_1_2_75	GCA_003943245_1_2_75	+	136718	.	.	hypothetical protein	MVRTIVRLRQLPIKAFTVLESLLVLMISSFILLALSSSVQATFEQIQAKIFFLEFEHFYQESQKLSVSSQRKLVLEISNQEISNGYARLPIPKGIQAPESTQIYFDKAGGNSSLSKVQFQTKEGLVTYQLYIGNGKFKKTTN*	.	hypothetical_protein	C1	36318	22266	58584	GCA_003943245.1|RJOY01000002.1@region_22267_58584@tool_cenote_CDS_0059	persistent	direct	high	428	0.998	GCA_003943245.1_00235