core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	genomad_gene	genomad_length	genomad_strand	genomad_gc_content	genomad_genetic_code	genomad_rbs_motif	genomad_marker	genomad_evalue	genomad_bitscore	genomad_uscg	genomad_plasmid_hallmark	genomad_virus_hallmark	genomad_taxid	genomad_taxname	genomad_annotation_conjscan	genomad_annotation_amr	genomad_annotation_accessions	genomad_annotation_description	genomad_element_name_std	genomad_element_name_orig	genomad_element_gene_wrt_to_contig	genomad_element_gene_wrt_to_element	genomad_element_gene_start	genomad_element_gene_end	genomad_protein_translation	genomad_phage_region_id	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	361	1101	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_1	741	-1	0.453	11	GGAGG	GENOMAD.133734.VP	9.867e-40	150	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	1	1	361	1101	MTTANELVQFTIGLANSGMGVDKDGFGGTQCADLVTYPSKHFFGVDLWGNAVDLLDSAEAAGWEVHRMPTDANPRAGAFFNMNAWFGGVNYGHCGIVIEDSDGITMRTVEQNIDGNADALIVGGPARYNNRGFEDVIGWFYPPYSDGAAPVTPADVTPTSEEIELTPETGTFTIGTSAINVRREPNLNSEIVHVYEAGDTVNYDSKGSANGYRWISYIGQSGNRNFMAIGQTDDAGNRITLWGDLS	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0001	cloud	direct	high	741	1.0	GCA_003943515.1_01772
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	1116	1490	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_2	375	-1	0.448	11	AGGA	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	2	2	1116	1490	MTKVKVTDYAEGNFRFGFGSKLYLARNEEAQVRAHISTPATQRWDNGQYTLNERIAEGFKPAHPVTFTAKVIAQGKIQPQAAIDFVLMPDGRVLVNASNVRQLPTPLDIVGEVTYVIGASQFDK	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0002	cloud	direct	high	375	1.0	GCA_003943515.1_01773
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	1585	1845	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_3	261	-1	0.448	11	AGGAG	GENOMAD.138108.VV	6.495e-18	79	0	0	1	1246	Caudoviricetes	NA	NA	PF04531;COG5546;TIGR01598	holin, phage phi LC3 family	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	3	3	1585	1845	MNKINWTVRLKNKNFWLALVPAIALLLQAAGDIFGLKLEFGVTIDKILVFINVLFALLVLVGVVNDPTTAGLGDSQQALNYDEPKK	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0003	cloud	direct	high	261	1.0	GCA_003943515.1_01774
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	1842	2249	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_4	408	-1	0.434	11	AGGAGG	GENOMAD.031992.VV	5.836e-49	171	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	4	4	1842	2249	MNHLIDFVDKLTPVLVVIIPSYFSYRSNQNSKETDKRIEALVEDLGDLKESVTNIQNIGNRNNQDLNLIQKGLQRLQRFRLQENLKKALRRGQTTQHELEELSRLYESYVELGGNGAIKLLFEKFSKLPIREEKV	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0004	cloud	direct	high	408	1.0	GCA_003943515.1_01775
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	2263	2517	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_5	255	-1	0.455	11	AGGAG	GENOMAD.049284.VV	1.288e-40	144	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	5	5	2263	2517	MTLEIVKTTKLVGSLKVGDTVIKTMTADIDDKGVTTFTEWINDSEAYAANRREVRKQEQAFQDAVYAAEDAIIAELEVKGAEKK	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0005	shell	direct	high	255	1.0	GCA_003943515.1_01776
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	2520	2690	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_6	171	-1	0.380	11	AGGAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	6	6	2520	2690	MNETIQSKLAIEIASKSLTIAKLEAQNEELQAQLQQALDRNAELETSTALETEKGE	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0006	cloud	direct	high	171	1.0	GCA_003943515.1_01777
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	2700	6572	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_7	3873	-1	0.456	11	AGGAGG	GENOMAD.070038.VV	4.221e-129	450	0	0	1	1246	Caudoviricetes	NA	NA	PF14386;PF06605;COG4926;TIGR01665	Phage-related protein	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	7	7	2700	6572	MITFIDEKGTEHSALVAYSATNAVNGELSVKGTIYTNDKVLHGIDRGWRFRLDDEYYRVTYAKPNDAGRQIEVEFDAVHQFFYDMSKSMVYDTLNGSKPFETYLQAIFSGSGYTYNLETTVGSIRKENFGNKSRLSLFNDIIKAAGLEFSVRGHVVRILKRIGTDLSAIVRKDFNMNELKIEKNINSFVTYQRGLGAWKDDEDHSKGRYESEYESPLAKIYGRIEAEPVVDERYKETGKLLERLKENVDKSYKVSVEIDIEDLSRAGYRLSRPNPGDFIMAINETLGFRQKVRIVSFTSEYDVGGNLISRKVVCNDIGSVQRRASEMSSLARSVQDVAAENAKAIATATKALVSADGKNTIYFSESKPRDEPVGTLRKGDQLYLKEGEKTNLYFWNGAEWELNPLEMDLVKFRKEYESKTEEINQSMASQNQQTAQALRTAGTNASAIEAAKGAITKLNQDLASAKTDLTQAQGQLSSNIAQIRSDVGIIRTQQTVYEQTNAQNMSRIVGQLGDKASKSEVKQTADRIREELASLAVGGRNYFLNSGLEITSGYKEIQIHPDFVKHAKGKRFVISVQVSGENVISTGKGRFGLSISAGIAGSSHRDWPEVWETGTGNISKKRIYKVFEFRDNWIDFIAGLYVQTGNGAVTGFPKLEIGTIPTDWSPAPEDAEGLITEAKASFERTAQGLRTDLTAVQAYVSANGMIVEALRAYSREETARQLIAERKLIEAGYVGKAQHTEDVRGLTRRFEELTEGGVNLLRNSANLPTAGDYRNGKWVATSGGNGTAQVVPVTSSPSPLIKSMIRIVNNTVGNKDLSQAAMALVVGQKYTVSCYARVASDSPSPTVGLLIRSWANNNDANRKLHKTISNRDWERHSLTFTADAVANSIQFGQSGAGSVEICAPKIELGTVTTSWSPSPEDATAYADTKLAEYKQNVDGQFATISQQIAGKASQTDFQRVQETSKLYERLIGSTEKEITDKVSRMIMTNQLFQIEVSKNQGLRTVQSQLAGSWAVQNLNSNGDIVSQINLTGPNVRIQGDSIHLDGKTLIDNGIIKNAMIESVLADKITAGTLNAANVNIVNLNANKIVGLDANFIKSKIELAFIEWMKGKVITAQNDAMKIDLNAGQINYYTDKAALKRVLTGYPNQFVKFATGKVVGKGLAGVTIIGSNRYGNESSDDGGFVGIRAWNGPDIDQVDIVGDTVRLTSSPFESADGWDVITLPNKLEIDAHNVNHRVSSRVKVGDVWLWKNASTYSSMRETINLIIDNLQLLHNNKTTEKGYNYTMPAKI	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0007	cloud	direct	high	3873	1.0	GCA_003943515.1_01778
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	6585	7448	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_8	864	-1	0.405	11	GGA/GAG/AGG	GENOMAD.054793.VV	7.839e-154	482	0	0	0	1246	Caudoviricetes	NA	NA	COG4722;TIGR01633	Phage-related protein	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	8	8	6585	7448	MDLLITHANAETKLSQLGIYNIKIDDSTPSVEVDRRTVKGRSGYIHDGVTLRQKTIKVSGRLAVASLSAFMEKQDELAGWLYGDEPYFVTKMHPVQDDLYGFELPGAKKGDLNLLEIPHTPWKYRYKVHIGNEIDYSFVGKSAAGLKYNISFELVTAELPFGETTPRDVVLSGGVIPYKGTAALSQLEVPYVVELTASASQTSFFLEIDGRRWVYNHASTPIKEGDKLRLSGVENVIYKGMALPDLNINIRTNYEYFIIRPNPQKQVRYSTDFRGTIKILGFKELYK	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0008	cloud	direct	high	864	1.0	GCA_003943515.1_01779
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	7461	12008	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_9	4548	-1	0.447	11	AGGAGG	GENOMAD.005798.VV	0.0	1150	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	9	9	7461	12008	MSFDGSIFAEIGADTRAYERAMNEIAVMTKQAFDNAQKAAVNSSNQMIQKIGQLMNELASNSSTLGQKIGQGFKGGLNIALGEIHRIASNIGQRLPEPIQNGLNKVAQAFISLNSKISSALSPITTKMTSVGSSIGNAFSSALGKVNNFANQASNTLGGKLISKVSTLSSKISSGLGNAFQQAGSKATNALMGIVNHTNQAASATSNLIKTALGISAAYAGFNFIKNAIGGAITKSADFEARMSSIKAVTGSSAETMKQFHDAAVKAGADTAFSATEAADAIEELAKAGVSTKDILNGGLTGALNLATAGELDLKEAAEIASTALNAFKRDNLSVVDAANQLAGAANASATDVHELKYGLSAVAPVASGLGLSFRDTTNALAVFAQNGLKGSDAGTSLKTMLMNLQPQTKAQTNMMRELGIITEDGSNRFFTAEGKIKSFAEVSQVLKESLSGLTEQQQQQALKTMFGTDAVRAATIAMNEGADGANKMQAEISKVTAAQVAAEKLNNLKGAIEGLSGSFETLQIKLGESVLPLFTTIVKYVDKLVDKFSQSQGIQNFTDAMATINPVLDHFLNGTKLADSVMEKFKGTMSSAAPILSLIGGLLAFGPATKGLTLLTGLLGGLGTKIGALGSILSSGFSSAAGMVGLFAAQVSGLGGVLGGAASKGLSVLSMMTSGISSVMSVALAAIGPAAILGLVVAGLGIIDNQFGTQIDQLLNTVTTKGPQIIHNLVQGITNAIPALIASGADLIAKFASAFATMFPVIVNAGVSLIVSLVQGIGQNATSLISSANTILSTFVSSLLNALPTLLSTGMELLANLSQGILKNIPQMMANAQKTVTTFLTGLGQQMPQIIQNGIQILQNLITGIVQSLPTILQIAVQVITSFIQGLVSNLPAIIQGGIQLIMSLVTGLIQNLPQIIASAAQIVISLVSGLIQAAPQLIMGGLQLIAQLVIGLITGIPKVLEAGWELIKALGGALIDGIVGIGQKVGEFFGGIWDWITGKNEEGASKTKATMDDLTSSVSAKTSEMSTAAKTNTQDMATGVQLNMDTMGLNASNAVNTMGTNVNTSFQNLVTSSNTNMQAVGANVTNGMTQAQTNATLQAQTMQQNVGNSMNLMGLDTLNKVTTMNTNVDANMQALVTTTGINMQALSSNVSSNMQQAQTTATTESATMNANVSSNLSGLNTSASSYMQALQTDSNAAFQTVQTNASAISSSTAAAVSGNYNTMSGNATGSTNSMQGSTTSAFTTMQSNAESSSQAVANAVTNNFKNAETAATNAMNGVSKAVTDGMNKVDQAATSGGNKMAQTFDSTLNKVKSSVQQGMSAVSSAFNSGMNQAVSISSSANSQIVAVFNTLASHLNSVGVHAGSGLYNGLASMAGSLYALAYSIASNIASVMRSALDIHSPSRVMDAIGGFTGEGMYNGMAGWVKAIDGVAKDYAMAITDQKYGVDSVVTTSASVNNSGIRSSLENLSDDVKHSQLSDTKFEIHNEIVGDKIYTTVKEKEARDRIKDDYFVYE	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0009	cloud	direct	high	4548	1.0	GCA_003943515.1_01780
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	12340	12813	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_10	474	-1	0.390	11	AGGAG	GENOMAD.065271.VV	3.034e-41	150	0	0	1	1246	Caudoviricetes	NA	NA	PF12363	Phage tail assembly chaperone protein, TAC	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	10	10	12340	12813	MEFKIGNKIVEIKFDFRLMFRIDKDLATKDANGQSSKNGIGALFYKIVDRDDQGIVDLIQFCGSKKGKAVSEDEALSAIENYFEKSDAEDPQEALFEEIQEEMVQSGFFKKKILKYIENMRLGLELAESQATENDATAQMQAKAISEIIGKMESALS	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0010	cloud	direct	high	474	1.0	GCA_003943515.1_01781
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	12872	13456	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_11	585	-1	0.426	11	AGGAGG	GENOMAD.046838.VV	2.149e-62	213	0	0	1	1246	Caudoviricetes	NA	NA	TIGR02126;COG5437	phage major tail protein, TP901-1 family	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	11	11	12872	13456	MAEKGQVKITTAKPIVGKKVFYFIQSIHAEKGEGALLPAYRTGGSTTLGGEYQDEQTQQGRLLEKSSDEHSIELTQYFAPMDPSIGVILDAQAKGESIKIWRVIVDESVKTKIGESGNQKDAYPAKFGYAKITDDVEFNDDVEGFVELSYTAGIVGRLQDGKFPLSAEELALLNDIYTYQNPGETTGDYDNIQR	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0011	cloud	direct	high	585	1.0	GCA_003943515.1_01782
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	13472	13831	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_12	360	-1	0.414	11	GGAG/GAGG	GENOMAD.070785.VV	6.876e-56	190	0	0	1	1246	Caudoviricetes	NA	NA	PF16807	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	12	12	13472	13831	MDSPTSNLLRDLKKRLGALSIPIHFKLPDASVVEPFLVVGGIASDTSKTAQTGLIIEDSTIQIDIFLPGSKSRVHAENIKSQAIRLLGRNRRTTSTILMDSSIGREVYHIVIKTTETIL	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0012	cloud	direct	high	360	1.0	GCA_003943515.1_01783
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	13834	14178	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_13	345	-1	0.449	11	None	GENOMAD.064522.VV	6.644e-62	207	0	0	1	1246	Caudoviricetes	NA	NA	PF11114;TIGR01725;COG5005	phage protein, HK97 gp10 family	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	13	13	13834	14178	MSLTYRVKGLDKFLREVQRKGRQAPIAVDRELNRSSLRVERLAKLYAPWDTGWMSENIYSMQAKFMGYKVISPAYYSIYVELGTRKMAPQPFMHPAVQEEYPKLMSNLNKMFKR	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0013	cloud	direct	high	345	1.0	GCA_003943515.1_01784
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	14175	14453	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_14	279	-1	0.380	11	AGGAGG	GENOMAD.066301.VV	3.772e-49	169	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	14	14	14175	14453	MIYNDRVILIKETTPKDELEDDVTTEQIGPLPCQRGTLTNNEQMGIFGKYNLDSFKLHLQGIHQDFSEVIYNGKRRAVKGKKHHKNSTVIYL	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0014	cloud	direct	high	279	1.0	GCA_003943515.1_01785
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	14469	14828	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_15	360	-1	0.408	11	GGAGG	GENOMAD.017099.VV	3.41e-55	188	0	0	0	1246	Caudoviricetes	NA	NA	PF11436	Phage gp6-like head-tail connector protein	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	15	15	14469	14828	MTAIDTNEILKEIKLLKGVSDTAQDDLLNLTIKESVERILAFVNRYSETSITEIPNNAAYIVRDVAIKRFNKLNSEGAKADSEEGRAFTWEDSYLSEDDKQTLISLATKRQARGIARFI	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0015	cloud	direct	high	360	1.0	GCA_003943515.1_01786
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	14832	15716	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_16	885	-1	0.429	11	GGA/GAG/AGG	GENOMAD.004411.VV	9.273e-54	193	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	16	16	14832	15716	MAEQKLTTMANLGEIKSIDFVNKFSKNINDLLTLLGVTRRQELTSDLKIQTYKWTADVNATNPGEGEDIPLSQMVRAKADAYEVAWFKKRRSVSAEAIARHGASIAITEADTRLMREIQNGIKEQFFTFLKANPTKNKGKGLQGALAQAWAKIATFNEFEGSPIVTFVSPTDAAEYLGNAGVGADASNVFGMTLLKNFLGMQNVIVMNGVPEGKIYTTAIENLVFANLNVASGDLGGLFADFTDETGLIAVARDRALKNLTYESVFFGANVLFAEIPQGVVETTIEKPAPVPGG	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0016	cloud	direct	high	885	1.0	GCA_003943515.1_01787
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	15720	16322	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_17	603	-1	0.423	11	GGAGG	GENOMAD.081853.VV	3.454e-77	256	0	0	0	1246	Caudoviricetes	NA	NA	PF14265	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	17	17	15720	16322	MSEEINGTTTTVDQTETVDTQNEKAVDVESNADSDKHGRTFTRAEMGKMLAAERTKWEAEQATALEQAKSEGERLAKLTKDERAREEEAKRIAELEKREQDIAEREMKLATQSLLADEGLPQEFLNHVLAPTAEEVKAKITALRDVFDSEVEKRVNERLVQSAPRRGTTTGITKEQIMAIEDTDKRQAAIAENINLFRKG	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0017	cloud	direct	high	603	1.0	GCA_003943515.1_01788
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	16480	16773	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_18	294	-1	0.327	11	AGxAGG/AGGxGG	GENOMAD.096722.VV	1.087e-40	145	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	18	18	16480	16773	MNKYKKLIGLIEDNHFEIQSKKCHDSLSGWTGNELWIVDKENGSKIFDLSINGYCFNDESVQKAIEKIENYLALKKMDTFDDFKSWIEKNAVPEKTG	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0018	cloud	direct	high	294	1.0	GCA_003943515.1_01789
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	16733	16909	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_19	177	-1	0.333	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	19	19	16733	16909	MFIWNLVSITAGVIVLIILLAISYIVLAGLLEGARNALARSRKERDEQIQKADWIDRR	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0019	cloud	direct	high	177	1.0	GCA_003943515.1_01790
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	16964	17173	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_20	210	-1	0.333	11	GGA/GAG/AGG	GENOMAD.092680.VV	5.803e-19	81	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	20	20	16964	17173	MENIKYYQTTTDNPQTLRLIDGVMQVFDIEKKWVDSIDWFNKIFFNDFTDFKEISENEAFAYIGKIVAA	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0020	cloud	direct	high	210	1.0	GCA_003943515.1_01791
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	17175	18704	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_21	1530	-1	0.403	11	AGxAGG/AGGxGG	GENOMAD.180376.VV	7.34e-28	122	0	0	1	1246	Caudoviricetes	NA	NA	PF04233;PF14890;COG2369;TIGR01641	Uncharacterized conserved protein, contains phage Mu gpF-like domain	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	21	21	17175	18704	MSKKPNQNHLDYWSGRSDEIFRYLDRKDIDFFAELNKIYQEQANEMQKAFYDFVSKYSENGSMSYQEALQRLKGTDLSDYRENARKYREQAEKDPELLKRLNEQYATARATRLESLQLDMLFRAGIARGLIADKFESYLQKMALMSYKKSMSGRTGTINEPALKELVKTPFNGYNYSQQLWGNTDNLVKDLKKVLKAGFVRGDHPRTMARDLAQKYKVANSRAETLVRTDGTMIVNRSAIQRYKDAGLKYYRILVHLDNRTTEICKRIHAEDKRYLIDEMQAGVNAPPFHFNCRSGVIPDEKELNGSVENNPDEVYNLSKRDGTAEYYSEQLLDRISKIEPKVTSDMQRIAGKNELVGLEFRKKTAESLARKIKTDSQIENISLSKAAGKINDALRYTTIFNPDTFEKEYQEMTQRLIEGGYKIVKVKNTWLMNGPYKGVNTVLEKDGINFEMQYHTQESFELKNGPLHELYEKYRDASTSNQERMKLFKKMLDLNKGLDIPRNIERVK	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0021	cloud	direct	high	1530	1.0	GCA_003943515.1_01792
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	18673	20202	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_22	1530	-1	0.412	11	AGGAGG	GENOMAD.003239.VV	2.662e-177	562	0	0	1	1246	Caudoviricetes	NA	NA	PF05133;TIGR01538	phage portal protein, SPP1 family	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	22	22	18673	20202	MEVKFLKGTRFDSRSNEHFMMMFEDFEAIEYGSDNWIEQLKRYVNRHKAEQQPRLKELKRYYKGDNNIKYRPAKTDETAADNRISSDFAKYITIFEQGYMLGNPVEYKNENKAILEHIKDFSAKNNEKKHNSSIKKDLCVYGRAYELLTVTERDSKAWVKLYKLSPEQTFVIYDDTYEQNSLMAVNYYDVDYGDSKRKTIIKVYTADRIYSYEWKSTNSDKMALKDEQEHYFKAVPVNEYSNNEERLGSYESVLDNIDAYDLSQSELANFQQNSNDAILMIKGNPYTGAEENDFLEDGRINPNGRLYVSQAYKKAQVLILDDNPNPGGANPDAGYLIKSYDSKGAEAYKQRLVNDILRFTFTPDTLDNNFSGTQSGESMKYKLMASDNYREQQEDLFEAGLMRRLRLAVNIWAIQGNESTAYELINETSVVFKPNIPQNEKEIVEMIKSLYGIVSDQTIFELLNQVTGVDAADELKRLKEQEALEQPEQRLDPVDEVVDDEQEAEPKPS	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0022	cloud	direct	high	1530	1.0	GCA_003943515.1_01793
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	20205	21512	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_23	1308	-1	0.420	11	GGxGG	GENOMAD.100877.VP	1.499e-55	204	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	23	23	20205	21512	MSPTYQIKQNDIVVDLPKTVGGGYGQFWRSRNFYRVVKGSRGSKKSKTTALNFITRILKYPWANLLVVRRYSNTNKQSTYTDFKWAANQLKVAHKFKFNESLPEITVKETGQKILFRGLDDELKITSITVDVGILCWAWFEEAYQIESEDKFSTVVESIRGSLDAPDFFKQITITFNPWNERHWLKRVFFDKETQRADTLSLTTTYRCNEWLDEVDIKRYEDLYQTNPRRARIVCDGEWGVAEGLVFENYSVRDFDIQDTIKRVGETTAGLDFGFTHDPTTFPRLAVDLNKKELWIYAEHYEHAMTTEDIYQMIAKNDMLNAEITADSAEQRLIAELRSKGVRRIQASVKGKGSINAGIDFMKQFKIYIHPSCEKTIEEFDTYIYKQDKDGNWLNEPIDANNHVIDAIRYALEKYHIERKSTQDRMKNASYYFRR	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0023	cloud	direct	high	1308	1.0	GCA_003943515.1_01794
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	21490	21756	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_24	267	-1	0.464	11	None	GENOMAD.018575.VV	1.59e-17	78	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	24	24	21490	21756	MEQLASKKIATQEEVLSYLTSVMRGETQEQTLCSIGELGQEIIDIDVGAKDRIKAAELLGKRHRLWTDKVEVDVTGTVVFANESDIPD	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0024	cloud	ambiguous	low	23	0.086	GCA_003943515.1_01794
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	22038	22472	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_25	435	-1	0.393	11	GGAGG	GENOMAD.114682.VV	5.549e-62	209	0	0	0	1246	Caudoviricetes	NA	NA	PF07374;TIGR01636;COG2739	phage transcriptional activator, RinA family	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	25	25	22038	22472	MTINIKQRLKALQYIDIKAKSKHQEIISLKSGILRGQQFDNMPKAESPSNRSEELNVLIIDKSEQLYREIQELYQERDELVQAIESLDDPVENIIMRLLYIDGLSWNEIQVRLRCGRGTIHRARDSALKKLSKKNGTNGTLWNS	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0025	cloud	direct	high	435	1.0	GCA_003943515.1_01795
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	22469	22873	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_26	405	-1	0.410	11	AGGAGG	GENOMAD.085805.VV	3.703e-45	160	0	0	0	1246	Caudoviricetes	NA	NA	PF09643;TIGR01671	YopX protein	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	26	26	22469	22873	MIPKFRAWYVLAEEMIDEILMISFIRKEVVGKFSDGSTSVPLKFEDKRNGEDVILMESTGLKDKNGKEVFIGDIVKCTRGCPHEVYLEKEYGGTFIGGMPAVYLKGLNEGYAWTEAEEIIGNIYENKGLLEVSD	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0026	cloud	direct	high	405	1.0	GCA_003943515.1_01796
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	22870	23097	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_27	228	-1	0.342	11	AGGAGG	GENOMAD.015247.VV	2.916e-28	108	0	0	0	1246	Caudoviricetes	NA	NA	PF07083	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	27	27	22870	23097	MSRFEISLSKDDLEYIANGYDIKIKIDGKRFLGTNEIILKPAVRNDLMNPLLKYRHKLIDTEARNVANNFIGGAR	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0027	cloud	direct	high	228	1.0	GCA_003943515.1_01797
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	23186	23614	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_28	429	-1	0.361	11	AGGAG	GENOMAD.010473.VV	6.026e-18	82	0	0	0	1246	Caudoviricetes	NA	NA	PF07852	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	28	28	23186	23614	MKKQELIKHIEDLPYSKGLIVDTIKISRKGLLELVSQLDEPQKVKIPEFVADWIEYCKFTHVDLQHALIVGDVYFYNYANQKDFSKLKEFLETENNQATFARAWILGYEVEKEKRYTVVMKTTIQPLYYNVLEKNYFSRWVD	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0028	cloud	direct	high	429	1.0	GCA_003943515.1_01798
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	23611	23838	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_29	228	-1	0.439	11	GGAG/GAGG	GENOMAD.053518.VV	1.306e-28	109	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	29	29	23611	23838	MKINYIDFFSRVIPEWMACSNQKSQEVGFGSDVYWLWVVSSIGEICKQYNDDELVTEQFGLLFSWLEKQAEGAGR	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0029	cloud	direct	high	228	1.0	GCA_003943515.1_01799
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	23835	24236	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_30	402	-1	0.418	11	4Base/6BMM	GENOMAD.028440.VV	8.282e-69	228	0	0	0	1246	Caudoviricetes	NA	NA	PF05866;COG4570;K01160	Holliday junction resolvase RusA (prophage-encoded endonuclease)	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	30	30	23835	24236	MFIEFFLPMKKIPTTTHQQKKVNVQFGKPIFYEPEDLKKARAKFESLLAQHVPPDKFKGAIRLTVKWCFPRIKKSYDGQYKTTKPDTDNLQKLLKDCMTKLGYWQDDAQVASEIVEKFWADRVGIYIKIEELS	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0030	cloud	direct	high	402	1.0	GCA_003943515.1_01800
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	24482	26752	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_31	2271	-1	0.469	11	AGGAG	GENOMAD.168744.VP	2.594e-73	267	0	0	0	1246	Caudoviricetes	NA	NA	K07505	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	31	31	24482	26752	MAENDFNLLPLLDYINPATVDYQTWVNVGMALKHEGYTASDWDNWSQNDSRYKKFECFKKWDTFNEEAGTVVTGATITQLAKEGGWVSQSSYDSENAHELDWNDTIDRDYRVIDKNWIEGKEIHEPTVWNPVQEIIKYLETLFEASENVGYVTECYPKTDDETGEIEKWLPTKGAYDRTAGQLIKELSQCDGDIGRVLGDYKEEAGAWIRFNPMDGKGAKNENVTDFRYALVESDNMPIDKQNAIYKELELPIAALVHSGNKSLHAIVKVDAKNYEEYRNRVDYLYKVCQKNGIVVDTQNRNPSRLSRMPGFVRNGQKQFLVDTNIGKADWDEWYQYIEDLNDDLPDPEGLADSWDNLPELAPELIKGVLRQGHKMLIAGPSKAGKSFALIEMSIAIAEGKKWLGWDCTQGRVLYVNLELDRPSALHRFRDVYQAMGLAPQNIQNIDIWNLRGKTVPMDKLAPKLIRRALKKNYIAVIIDPIYKVLTGDENSADQMAHFTNQFDKVATELGSSVIYCHHHSKGSQGGKKSMDRASGSGVFARDPDALIDLVELEVSEELLTQRLNQAACEVYKQALQERNNTYYQQNVGLDDLLSPAQMRTHFEKGIPDVMARAPYVDKLEEVRNKIQIATAWRVEGTLREFAKFKPVNMWFSYPVHALDESGVLADIKLDDDKPGWMKAKETRKKNAKEDKKQKLKEFDEAIENANFGEPPSKEDVAEYLGVSIKTVERRLKTSKKYWLDKNTLTILNKENATEL	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0031	cloud	direct	high	2271	1.0	GCA_003943515.1_01801
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	26767	28350	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_32	1584	-1	0.479	11	AGGAGG	GENOMAD.094997.VV	1.293e-07	57	0	0	0	1246	Caudoviricetes	NA	NA	PF16203;K19789;COG3189	Uncharacterized conserved protein YeaO, DUF488 family	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	32	32	26767	28350	MQLRPYQQEAREAVQAEWAKGRKRTLLVLPTGCGKTIVFSKIIEDQVKEGKRVLVLAHRSELLEQASDKLKTATGLGTALEKAENTSIGSWYRVVVGSVQTMQRKKRLSQFPPDWFDTIVVDEAHHAISDGYQRVLGYFEQSNVLGVTATPDRGDMKNLGSYFDSLAYEYSLVQAIKEGYLSKIKALTIPLSLDLSNVSMSAGDFKASDVGTALDPYLEQIADEMVKQCADRKTVVFLPLVKTSQKFRDILNAKGFRAAEVNGESKDRAEVLEDFEKDRYNVLCNSMLLTEGWDCPSVDCVVVLRPTKVRALYSQMVGRGTRLHPGKEELLLLDFLWHTERHELCRPAHLICETPEVAQKMVENMEEQTGVMLDLEDMEVKATEDVVAQREEALAKQLEEMRKRKRKLVDPLQFEMSIHAEDLSNYVPNFGWEMAPASDKQLKALEKYGIFTDEIGNAGKANLLLDRLHKRQSEGLTTPKQIRFLEGRGFKDVGMWQFDQARNMIDRIAANGWRLPAGVRPAEYVPN	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0032	cloud	direct	high	1584	1.0	GCA_003943515.1_01802
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	28361	28915	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_33	555	-1	0.441	11	AGGAG	GENOMAD.005320.VV	4.849e-30	119	0	0	0	1246	Caudoviricetes	NA	NA	PF05037	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	33	33	28361	28915	MTQQYNNFDHEIGWEDTIEKDSDFVLLPDGLYYFTVVGMERTRHTPNPQNPGKLPACNKAIVSIKIVANEGETELRHNLFLHSSTEGMLSAFFAAIGQKKKGEPLRMNWNAIIGATGVCKVGTRQYNGNNYNEVKSMLYPEDVDYTKVLNQQPQGQTTQPSYQQPQQPNFAQQPPQAGYQAGQF	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0033	cloud	direct	high	555	1.0	GCA_003943515.1_01803
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	28929	29666	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_34	738	-1	0.393	11	AGxAGG/AGGxGG	GENOMAD.042333.VV	2.451e-76	256	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	34	34	28929	29666	MTENLKEALSYAVELAGKENKIVRSETGKEYFDSDEYDLQELNPRKYAPILELQTLKSLVDYLKSDNDFISDRKLVVVVDSFQKVSVYDQVDFENGKRPQLVSVKATVPVIPFSYWRDQEEFNIMLQSMFINDADRNLVLDFASHLKIEKGAEVQDNGISQIATVRDGVASLAQAKTPNPVTLRPYRTFNEVEQPASQFVFRINKSASLALFEADGGKWKLEAVESIENYLKNELASNKKITILA	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0034	cloud	direct	high	738	1.0	GCA_003943515.1_01804
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	29669	30094	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_35	426	-1	0.415	11	AGGAG	GENOMAD.092954.VV	1.608e-32	124	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	35	35	29669	30094	MKDKTIKIDLSKIANTALQEKVDKELEKVLENILDLNTEAKATRKVTITLTMSTDDERTVVKTGMEVKSTLAPQKGVATTVIVGRDDTGKIHANELKSGIPGQTYFDDNGDMRTDTGELIEKVEQQEKSKIIDYNQKKAGN	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0035	cloud	direct	high	426	1.0	GCA_003943515.1_01805
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	30140	31270	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_36	1131	-1	0.480	11	AGGAGG	GENOMAD.141036.VV	5.04e-71	247	0	0	1	1246	Caudoviricetes	NA	NA	PF13479;TIGR01618;K04484;COG0468	phage nucleotide-binding protein	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	36	36	30140	31270	MQITRGKRARAQKVVIYGPEGIGKSTFAAEFPNPVFIDTEGSTDNMDVARLDKPTSWTMLINEIAFIKANPTECGTLVIDTIDWAESMAVADVCAQHGKKGIEDFGWGKGYTYVQEEMGRFLNSLSDLVDMGINVVLTAHAQIKKFEQPDEMGSYDRYELKLGQKTGSKTAPLVKEWADMVLFANYKTLVMTAENGKKKAQGGERVMYTNHRPAWDAKNRHGLPDEMPFYYAGIAHIFAGQQVQAQQAQPQAVAPAPQQATPQPQPTQTELPIDMTQVAAKPQNSAPEEPQTQAEPTQPAQYHASLPTGLTDLMKQENVTEEELQKVAYIRGHFPLGTPIENFPPDYWDMIVAHWQATMEVIQNQVRAEPDLPFTM	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0036	cloud	direct	high	1131	1.0	GCA_003943515.1_01806
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	31274	32584	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_37	1311	-1	0.458	11	GGAG/GAGG	GENOMAD.010825.VV	1.31e-204	637	0	0	0	1246	Caudoviricetes	NA	NA	PF13175;TIGR00634;COG4717;K03546	DNA repair protein RecN	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	37	37	31274	32584	MVTINKLEIENVKRVKAVKLEPSATGLTIVGGNNSQGKTSVLDAIAWALGGNKYKPSQAQREGSTIPPSLKITLSNGLIVERSGKNSTLKVIDPSGNKAGQNLLDSFVEELAINLPKFMEQTSKEKAKTLLQIIGVGPQLAELEMQEKAKYDERHAIGVIADQKEKFAKEQPYYPDAPKELVSISELIQQQQEILGRNGENARKRQNLTRIENEYQGALADVERLSKMLEEAREKEQGLAQDLDIARKDTQELIDESTQEIEDSIANIEQINLKVRANFDKDKAEEDAKDYREQYKELDNVIADIRKQKTDLLTNADLPLPGLSVDDGELLYLGQRWDNMSGSQQLQVATAIVRKLKPECGFVLIDKLEQMDQQTLQEFGAWLEQEGLQAIATRVSTGDECSILIEDGYSVKPVEFASAAQQGHAETVAPTWQGGF	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0037	cloud	direct	high	1311	1.0	GCA_003943515.1_01807
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	32587	32781	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_38	195	-1	0.385	11	GGAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	38	38	32587	32781	MNIEMILGIGLLVSVGLLVTNMTISTAIINRLKEKNNYYRSAKYRLEMFEQELALRNKKMKIGE	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0038	cloud	direct	high	195	1.0	GCA_003943515.1_01808
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	32788	33051	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_39	264	-1	0.443	11	None	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	39	39	32788	33051	MSLKDLKRLTILVVVAIVLLAIAGVQIIDKQNQQIRELQEQIKDNRDSIRVQADTNRRQEVTVDKFNNMYYEFEYWKKTGKADFPGG	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0039	cloud	direct	high	264	1.0	GCA_003943515.1_01809
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	33058	33381	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_40	324	-1	0.398	11	AGGA	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	40	40	33058	33381	MSEIIKVKTAKQLTAEAREQIGRIAASETIRVINSWIREEANAGGVSIKFTHNEIRNTVTKGVRKHYFNLDDVIAKTITQYWLAGYSGSKEKTPAGIYFKISWDFVG	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0040	cloud	direct	high	324	1.0	GCA_003943515.1_01810
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	33407	33715	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_41	309	-1	0.427	11	GGAG/GAGG	GENOMAD.050216.VV	1.362e-56	191	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	41	41	33407	33715	MPKAELVYRPANQSEKAEAGDYEHLCQIWEGLTPSTAKVWAREMREHPDFSRYIDNPTHKIVFINYEGFRLFVKWKSRNRYRSKKETLDEMLKNIKFEERAS	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0041	cloud	direct	high	309	1.0	GCA_003943515.1_01811
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	33794	33985	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_42	192	-1	0.391	11	AGGAGG	GENOMAD.057124.VV	3.086e-22	90	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	42	42	33794	33985	MPDIDNGRKKVSEYLKQHNIKKRDLATAYGYKRQEVTNILNGSTKGPAANKFILRVIADYSIE	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0042	cloud	direct	high	192	1.0	GCA_003943515.1_01812
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	33997	34137	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_43	141	-1	0.390	11	AGGA	GENOMAD.176769.VC	4.441e-05	40	0	0	0	1246	Caudoviricetes	NA	NA	PF13744;TIGR02612;COG3655;K22299	mobile mystery protein A	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	43	43	33997	34137	MYKLAKESGIHQSNFSNLKAGRLKEMSWSNMCKIADALEVSLDEFR	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0043	cloud	direct	high	141	1.0	GCA_003943515.1_01813
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	34354	34485	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_44	132	1	0.455	11	AGGAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	44	44	34354	34485	MAKNTKQTSAKVATKASKALRDGRSSARTKSIAGSALSQTRKK	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0044	cloud	direct	high	132	1.0	GCA_003943515.1_01814
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	34465	34647	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_45	183	-1	0.339	11	AGGAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	45	45	34465	34647	MKIGGITTIDSEISFGECDIQEVPEEIKKLFPDQNLIKVSERGKSYILNTDYIVLLFTSL	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0045	cloud	direct	high	183	1.0	GCA_003943515.1_01815
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	34758	34850	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_46	93	1	0.398	11	AGGAG/GGAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	46	46	34758	34850	MMELILKTIIGPIVVGVVLRLADKWLNKDR	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0046	.	unmatched_CDS	none	0	0	.
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	35284	35598	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_47	315	1	0.419	11	None	GENOMAD.215921.VP	4.756e-05	43	0	0	0	1246	Caudoviricetes	NA	NA	COG5606;TIGR00673;K18830	Predicted DNA-binding protein, XRE-type HTH domain	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	47	47	35284	35598	MRGISINSLEETLGYSRNTIYSMKSKKPNAERLQEIADYFHVSTDYLLGRTDNPAIANDDTIAGYTSDDLRKMAENAKTFDGKPLTEEDIDAIQNIIEIYLRGR	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0047	cloud	direct	high	315	1.0	GCA_003943515.1_01816
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	35602	35982	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_48	381	1	0.383	11	GGAG/GAGG	GENOMAD.021015.VV	1.141e-37	138	0	0	0	1246	Caudoviricetes	NA	NA	PF20573;COG2856	Putative metallopeptidase family (DUF6782)	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	48	48	35602	35982	MTIEELVDSHGVTLAYFDNELWHRPGIYVKDINIIFINRELSENAKKRVIYHELGHLDHSAELYQNNHTRCENEANRHMIHKLLEEELAASDDHKSFNYLHFMQKHKLKTVTDELMVIDEYYELIG	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0048	cloud	direct	high	381	1.0	GCA_003943515.1_01817
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	35987	36529	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_49	543	1	0.413	11	AGGA	GENOMAD.061086.VV	5.739e-62	211	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	49	49	35987	36529	MDFKKISDLAKTAVDKTAEGISKANDMRKKAALETKITLPASNQFSSPTTVRKTVDGQYYIGMYSEEPVLYEFENFNFSGSTIIERTTTTGKTKQKGRAGSVLLGGAIGAAINPVGAVVGAMAGGARGKKGTINSTSVTTQEEKPGAASISLRNIITSEIKTISTKLTQAQANNVERFFE	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0049	cloud	direct	high	543	1.0	GCA_003943515.1_01818
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	36601	37266	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_50	666	1	0.339	11	AGGA	GENOMAD.132376.VV	7.937e-51	181	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	50	50	36601	37266	MEILKNTLSLIVLVSAAGIWYFVKKRPNAKYRNISIAVLISCALVIGTFFRENKTNTELTKPATTQTTSSSSSKNSVSKENSKENKVSESKSEASSSQEIKNDGPDYTEESNTQFANHLTIEINNQLAESGHQVITKPVGKNVIYLYLPQEVKYYSKVEIQQIADKLYKIKESTFKNWAIENGYDLSFANSPNLYVKAEDDTTLAAESGIINKSMKVKINN	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0050	cloud	direct	high	666	1.0	GCA_003943515.1_01819
GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	genomad	CDS	37390	38541	GCA_003943515.1	RJPT01000012.1	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1_RJPT01000012.1	GCA_003943515.1|RJPT01000012.1_51	1152	1	0.360	11	GGAG/GAGG	GENOMAD.111131.VV	3.18e-12	71	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad	GCA_003943515.1|RJPT01000012.1	51	51	37390	38541	MWMEELTNGKYKFFERYKDPYTEKWKRVSVTLDSGSARAKKEAQKQLDEKISQKLQSLSTTDMLFEAVLDDWWELHKKSIKASTEKTMIYAVSEVKESFAPGVKIKNITAKYAQQYFTDSEDNHIKLKKHKSVLSMVFKYAQDLELIDTNPIQRVRLPKKVVTYETMERIENKFLEQNELKRLLKAMREYNRGYHVARMAEFMALNGCRVGEAGALKFENYDKKNRTITINGTLDPTRKGSEGVKTTPKTLSSIRVVDLTNKEIEIIEEFIELHELRKNTNPNYKDMGFIFVSSNGIPIHKSSIGKLMKNANATLKKPINKPLHPHILRHTLISTLAENNIPLKAITQRVGHKDNGKTTMEIYTHVTKNIKSKVVDVLDKLYK	GCA_003943515.1|RJPT01000012.1	GCA_003943515.1|RJPT01000012.1@region_1_38654@tool_genomad_CDS_0051	cloud	direct	high	1152	1.0	GCA_003943515.1_01820
GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	genomad	CDS	497834	498268	GCA_003943515.1	RJPT01000001.1	GCA_003943515.1|RJPT01000001.1	GCA_003943515.1_RJPT01000001.1	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819_498	435	-1	0.343	11	AGGAG	GENOMAD.017137.VV	3.165e-43	155	0	0	0	1246	Caudoviricetes	NA	NA	PF05263;TIGR01636;COG2739	phage transcriptional activator, RinA family	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	GCA_003943515.1|RJPT01000001.1	498	1	1	435	MTPEQVKVKLEGIRWLDKEIQSLQLELQYLDQGLFKKSTLTQTKVQTSRVNNTENELVYVLKLKEDIQERLSNLINERLETSKLIDKLSDPLERSVLRMFYVNHLEIWNIEDKIEKSKTTIYRIKSSGIKNLAKLTSDGASKLT	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad_CDS_0001	shell	direct	high	435	1.0	GCA_003943515.1_00514
GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	genomad	CDS	498402	498617	GCA_003943515.1	RJPT01000001.1	GCA_003943515.1|RJPT01000001.1	GCA_003943515.1_RJPT01000001.1	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819_499	216	1	0.454	11	AGGAG	GENOMAD.224934.VP	1.405e-33	123	0	0	0	1246	Caudoviricetes	NA	NA	PF04014;COG4456;TIGR02609	Virulence-associated protein VagC (function unknown)	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	GCA_003943515.1|RJPT01000001.1	499	2	569	784	MNTVKTRKVGNSLTVTIPKALDVPEGQEMVVYKGADNVIVLAPKIADPFAEAADLRMENDFEGVKLLDSEI	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad_CDS_0002	shell	direct	high	216	1.0	GCA_003943515.1_00515
GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	genomad	CDS	498601	498954	GCA_003943515.1	RJPT01000001.1	GCA_003943515.1|RJPT01000001.1	GCA_003943515.1_RJPT01000001.1	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819_500	354	1	0.483	11	GGA/GAG/AGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	GCA_003943515.1|RJPT01000001.1	500	3	768	1121	MTAKSNYVPEKQDIIWIDFDPSVGREIQKRRPAVVVSRKEYSERTGFVAVCPVTHGQKKLEKLGLLVPVLSSEVDGSVNPLQLYTFDFRERQAKKITTMDTPSFQKVVQLYNFIFEA	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad_CDS_0003	shell	direct	high	354	1.0	GCA_003943515.1_00516
GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	genomad	CDS	500284	500742	GCA_003943515.1	RJPT01000001.1	GCA_003943515.1|RJPT01000001.1	GCA_003943515.1_RJPT01000001.1	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819_501	459	-1	0.458	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	GCA_003943515.1|RJPT01000001.1	501	4	2451	2909	MTESTYFEQADQELEELNRKRDDFMADATPVCLEDTPKLIELGEKLRMEDASINAYELYRHPEARAKLFAQIAEACFLLIADSSPVTVQPTQAQRIHFCEYLEGQFQNIIKKLIASTDKQALESLLEALQLPKEKQAQFIRNVVASGLLSEE	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad_CDS_0004	shell	direct	high	459	1.0	GCA_003943515.1_00517
GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	genomad	CDS	500763	501587	GCA_003943515.1	RJPT01000001.1	GCA_003943515.1|RJPT01000001.1	GCA_003943515.1_RJPT01000001.1	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819_502	825	-1	0.436	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	GCA_003943515.1|RJPT01000001.1	502	5	2930	3754	MELLNTDQLNEKIKVTDELCPIHQINLVQFKKPDGYTSPYCMECTRENIKQTELEGVEKALGHDLDSSTYDMLARESTVSNELREASFSTFKAETKEEHEAKEFAIKQARQYLNGMTGNTLIMGNPGTGKSHLCYSMAKAINEGYKAKNEPKSVLFVSIAEIVTRIQSGWQYRQSDFTEYDALKLLTEVDYLFIDDLGSESVMNSRKDEANNWVQTFLFKVFDKRETTIINTNHNGKELARIYNDKLVSRIGKRSEGNVYNMTDIKDKRMKRNF	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad_CDS_0005	cloud	direct	high	825	1.0	GCA_003943515.1_00518
GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	genomad	CDS	501603	502406	GCA_003943515.1	RJPT01000001.1	GCA_003943515.1|RJPT01000001.1	GCA_003943515.1_RJPT01000001.1	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819_503	804	-1	0.371	11	GGxGG	GENOMAD.189730.VP	9.318e-15	77	0	0	1	1246	Caudoviricetes	NA	NA	PF14297;TIGR01714;K02315	phage replisome organizer, putative, N-terminal region	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	GCA_003943515.1|RJPT01000001.1	503	6	3770	4573	MAKTKIYFWLKIDKKFFENLFIKRLKNMPGGYTMTVIYIRLMLESLESDCILYYEGYLETLKEELALKLDVSEDDIQMTMTYFTKCGLIQIDEDKNAELTQAKALVQQETNHAAYMRSYRKEQQEKSKNLTMLPEDLTTLSMCKTEIEIEKEIEIELEEEIDKKTSAASAAEISSYYQTRIGIIDGQQYQILTDYLTLDGMELEVIKTAIDKAADNGKRSFSYINSILKNWRQNGIRTMVQVEDEQRQFQQKKLGQSDDDIQDPFIY	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad_CDS_0006	cloud	direct	high	804	1.0	GCA_003943515.1_00519
GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	genomad	CDS	502393	502674	GCA_003943515.1	RJPT01000001.1	GCA_003943515.1|RJPT01000001.1	GCA_003943515.1_RJPT01000001.1	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819_504	282	-1	0.440	11	GGAG/GAGG	GENOMAD.167683.VP	3.961e-49	169	0	0	0	1246	Caudoviricetes	NA	NA	PF09035;COG3311;TIGR01764	Predicted DNA-binding transcriptional regulator AlpA	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	GCA_003943515.1|RJPT01000001.1	504	7	4560	4841	MFSLSKESEYELTHGVLELVENYLEAREKVKPRLTGLISAQQAMDELDIKYKTLQRWENAGLRRYKPPLEDARKVYYRVSELLKFLGVENGKD	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad_CDS_0007	shell	direct	high	282	1.0	GCA_003943515.1_00520
GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	genomad	CDS	502667	502999	GCA_003943515.1	RJPT01000001.1	GCA_003943515.1|RJPT01000001.1	GCA_003943515.1_RJPT01000001.1	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819_505	333	-1	0.483	11	GGAGG	GENOMAD.030262.VV	1.247e-13	68	0	0	0	1246	Caudoviricetes	NA	NA	PF03444;K03491	NA	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	GCA_003943515.1|RJPT01000001.1	505	8	4834	5166	MTELEERILRLIPVGADEPRAGRDIANVLGLEMRALRDHILRLIIRYGIPIVAKRGAGNGYYIPANDTERLAGIRELKAQYDTEGRRLDVLIKADLESYKELLKGADQNV	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad_CDS_0008	shell	direct	high	333	1.0	GCA_003943515.1_00521
GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	genomad	CDS	502986	503165	GCA_003943515.1	RJPT01000001.1	GCA_003943515.1|RJPT01000001.1	GCA_003943515.1_RJPT01000001.1	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819_506	180	-1	0.461	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	GCA_003943515.1|RJPT01000001.1	506	9	5153	5332	MSELLGAILTLLLFFLAGVCAELFHSWAIAYRRRGYITKRQLRKMEKWLETMEACHDRT	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad_CDS_0009	shell	direct	high	180	1.0	GCA_003943515.1_00522
GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	genomad	CDS	503162	503659	GCA_003943515.1	RJPT01000001.1	GCA_003943515.1|RJPT01000001.1	GCA_003943515.1_RJPT01000001.1	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819_507	498	-1	0.373	11	GGAG/GAGG	GENOMAD.083515.VV	1.208e-46	166	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	GCA_003943515.1|RJPT01000001.1	507	10	5329	5826	MSTKTTYGNLTKNLDRIADNLHQIGEQNNLVDLSLLSVQLGAIKEDLARLLWVELPELNDGSKLEKLFNKSTGMFFSPGIFEIDAMRQAFFKRQAQAFFTSEEEQQAYLTYTEKLYLGATKTFKEIMKDTNQNLPNSSYQEKQARNIEQFTADISNNVQHKELSK	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad_CDS_0010	cloud	direct	high	498	1.0	GCA_003943515.1_00523
GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	genomad	CDS	504128	504766	GCA_003943515.1	RJPT01000001.1	GCA_003943515.1|RJPT01000001.1	GCA_003943515.1_RJPT01000001.1	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819_508	639	-1	0.432	11	AGGAG	GENOMAD.205814.VP	2.255e-113	361	0	0	0	1246	Caudoviricetes	NA	NA	COG3646;TIGR02681	Phage regulatory protein Rha	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	GCA_003943515.1|RJPT01000001.1	508	11	6295	6933	MNLVYMDGKKEPYTTHEIVAEHAEIEIISVRKLIDKHKEDLEVFGVLSFEIHKPEKGSLGGRPRKIYRLNEQQATLLVTYLGNTRPVRSFKTNLVKAFFEMRDELSQFKLQRALEKPKRKTLHDSIESWKEAPKHAHSTITNLLLKGTSGMNKKQLMAARGGLTGIDSLTSAELVRYQALEDMAIAMINLGMTYQDIKSMVFRPKENAPQGA	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad_CDS_0011	cloud	direct	high	639	1.0	GCA_003943515.1_00524
GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	genomad	CDS	504780	504977	GCA_003943515.1	RJPT01000001.1	GCA_003943515.1|RJPT01000001.1	GCA_003943515.1_RJPT01000001.1	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819_509	198	-1	0.364	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	GCA_003943515.1|RJPT01000001.1	509	12	6947	7144	MKNNFRVLLAKQRKKVLDVHKATGISKTTLTSLYYERTKNPEAETLLKIADYLGVTLDELLTPEE	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad_CDS_0012	cloud	direct	high	198	1.0	GCA_003943515.1_00525
GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	genomad	CDS	505145	505909	GCA_003943515.1	RJPT01000001.1	GCA_003943515.1|RJPT01000001.1	GCA_003943515.1_RJPT01000001.1	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819_510	765	1	0.280	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	GCA_003943515.1|RJPT01000001.1	510	13	7312	8076	MIQTNLKELLNRNNISINKLSIETGLSRPTLTSLMNNESKGIQFDTLEKLLDYFDISISDFFSVYNEEIIFNFLSEVSLSKAKIMEERPFSIERNDNYVEFNPSELMTYKCCIETDGIPGKSFDGALTPVMDNEKIVAMRLIFFRSDMEGNSLPIQDVKAFIKKLDSSALGSLVEKFLSNWYKRYKIIKKSDFSDIIITNLTLLDDQPVSYPVFIDIEKIGKEIRFDLYGYKNSGYKKGDEDFSNSVIFNDLEG	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad_CDS_0013	cloud	direct	high	765	1.0	GCA_003943515.1_00526
GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	genomad	CDS	506122	507108	GCA_003943515.1	RJPT01000001.1	GCA_003943515.1|RJPT01000001.1	GCA_003943515.1_RJPT01000001.1	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819_511	987	1	0.398	11	GGA/GAG/AGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	GCA_003943515.1|RJPT01000001.1	511	14	8289	9275	MNELQFLIYTADNDNETASVIIKGETIWASQKEMARLFDVGVPAISKHLKNIFEEGELEENSVISKMETTATDGKNYLVTYYNLDAIISVGYRVNSQKATRFRQWATSVLREYMIKGFAMDDERLKQGENLLEKDYFRELLERVRSIRASERRIWLQITDIFAEISIDYDPQSTLTKQFYADVQNKFHYAITGQTAAEIIYTKADHTKDNMGLTTWKNSPNGRILQSDTQIAKNYLTEKQIRSLERGISSYFDYLERQIEQRKAQTMQQLAQSIDRFLTFQEYDILEGHGKITSKAAKDKAKAEYQLFNKTQKINSDFERQIKHLSDK	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad_CDS_0014	cloud	direct	high	987	1.0	GCA_003943515.1_00527
GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	genomad	CDS	507342	508487	GCA_003943515.1	RJPT01000001.1	GCA_003943515.1|RJPT01000001.1	GCA_003943515.1_RJPT01000001.1	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819_512	1146	1	0.434	11	GGA/GAG/AGG	GENOMAD.016861.VV	1.49e-07	56	0	0	0	1246	Caudoviricetes	NA	NA	PF13671;COG2019;TIGR01359;K13829	AAA domain	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	GCA_003943515.1|RJPT01000001.1	512	15	9509	10654	MKITEVKKKDGSNVYRASVYLGVDQVTGKKVKTSITGRTRKEVKSKAQHAQLDFKVNGSTVHKTVRVKNYQELAELWLESYRLTVKPQTFIATERMVNSYLIPVFGKMKLDKLAASYIQSFINDLSSRLVHFGVVHSINSRILKYGVSLQLLPFNPARDIILPRKPKRESKAIKFIAPEDLKSLLGYMEKLAFKKYSHYFDYVLYSLLLATGCRFGEAVALEWSDIDLENATISISKNYNRLVDLVGPPKSKAGVRVISIDRKTVNMLKLYKNRQRQLFVEDGARAPSVVFAIPTKEYQNMATRQDSLDRRCKEIGIPRFTFHAFRHTHASLLLNAGISYKELQYRLGHATLAMTMDIYSHLSKDKEKEAVSYYEKAINDL	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad_CDS_0015	shell	direct	high	1146	1.0	GCA_003943515.1_00528
GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	genomad	CDS	508583	508819	GCA_003943515.1	RJPT01000001.1	GCA_003943515.1|RJPT01000001.1	GCA_003943515.1_RJPT01000001.1	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819_513	237	1	0.485	11	AGGAG	GENOMAD.219343.VV	9.902e-33	121	0	0	0	1246	Caudoviricetes	NA	NA	PF11195	NA	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad	GCA_003943515.1|RJPT01000001.1	513	16	10750	10986	MTFEEILPGLKVKKKYVRTGWGGAENYVQLFDTIEQNGVALEVTPYFLINVSGEGEGFSMWSPTPCDVLATDWVEVDD	GCA_003943515.1|RJPT01000001.1|provirus_497834_508819	GCA_003943515.1|RJPT01000001.1@region_497834_508819@tool_genomad_CDS_0016	persistent	direct	high	237	1.0	GCA_003943515.1_00529