core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	150266	151078	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	1	813	GCA_003944115_1_1_147	GCA_003944115_1_1_147	+	409812	.	cd07516	phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	MIKLLALDMDGTLLNSQKKISQENISAIHKAIKAGVKLVLCTGRPPFGVRPYYELLGLAQEDEYVIVDNGCAIHRTSDWAVIDSVALDKQDIHYLYSLTQDSSIQLTLFDEEHYFVVGETPSPIVVRDTGYVFTSPTEISLEEAVSGKYTMFQAMFLAEKEIVDIFEEKYASDICQRFSGVRSQDVIYEVMPAGVTKAFALEKLAQKLDIQAEEIMALGDANNDLEMLKFASLGIAMGNASDYVKSLADDVTDSNDENGVAKAIEKYLLN*	mmseqs_cdd	nonviral_gene	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0001	persistent	direct	high	812	0.999	GCA_003944115.1_00149
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	151308	151835	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	1043	1570	GCA_003944115_1_1_148	GCA_003944115_1_1_148	+	409812	.	.	hypothetical protein	MKKISLYSLTALSFIVLAACSAKSTEETSSSSSSEVTSSVSTAKKSKSAGTSQEDVINELKSIFDPNGNSKDFDIKVEKDVKDEAFPNGHTVITASIKGDTAAGTKEMMAAFDNNTATEEDKQILQGFRQTIADIAQKLPDDTTTIAFQYETKPNEYRVIAHSGKTKDIIPTTVK*	.	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0002	persistent	direct	high	527	0.998	GCA_003944115.1_00150
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	151895	152200	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	1630	1935	GCA_003944115_1_1_149	GCA_003944115_1_1_149	-	409812	.	COG0607	Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]. 	MFHFFTKVESISTAELEKRLKTNIKLLDVRTPSEYNRGHIKGALNIPLGQIDRYSQSKEEKLYVICHSGVRSRLVAKKLKKKGYDVVNVSGGMMSWKGDVV*	mmseqs_cdd	nonviral_gene	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0003	persistent	direct	high	305	0.997	GCA_003944115.1_00151
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	152588	152785	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	2323	2520	GCA_003944115_1_1_150	GCA_003944115_1_1_150	-	409812	.	PFAM:PF04936.11	transcriptional-regulator	MKADSEKIKWLLDNFSQYEISRATGVAQPSLSNIKSGTRKIENLSLKVASKLTEYAEELKMEKAK*	phrogs_hmm	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0004	shell	direct	high	197	0.995	GCA_003944115.1_00152
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	153261	153998	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	2996	3733	GCA_003944115_1_1_151	GCA_003944115_1_1_151	-	409812	.	PDB:5T1Q_D	Adenosylhomocysteinase	MDKVKLFQNEVLGSGFDIDGWFGWQCWDGYAKYCLWLGVPFSNCTDSLYVKDLWNQRHENGILDYFDEVENLEGGEVCIFVESPLTPVSHVAIFAGDVDGVNGQFLGQNQGGAPGPFGGGVFDVQIFPYSILYPTAFRPKGESLPKQELKEAITEVMDNHEVPFFPEDATFTVGDSPINVRREPSLTGEIVAVYQPGEKVHYDSKGSNDGYRWISYVGESGNRNYLAIGQTDEAGNRIDLWGELS*	common_virus_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0005	shell	direct	high	737	0.999	GCA_003944115.1_00153
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	154013	154342	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	3748	4077	GCA_003944115_1_1_152	GCA_003944115_1_1_152	-	409812	.	PFAM:PF09682.9	Phage-holin	MNQITDIVVSGAMSILVVLVGIVVNSVKQYLLTRGGKKAIETAEILAKNAVNATEQVADKLDIHGKEKLEYAKTSLIEGLEANNIYLTNDQLNTFIESAVKTANDAWKK*	common_virus_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0006	shell	direct	high	329	0.997	GCA_003944115.1_00154
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	154339	154791	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	4074	4526	GCA_003944115_1_1_153	GCA_003944115_1_1_153	-	409812	.	PFAM:PF05105.11	Bacteriophage-holin	MYQEPDGIFGIIEVVRDFYDHGIDEHMIVFLLMAIVALDIVLGVSRAWAYHEFSSRKWRKGLVSHTAMILIVAIGYPFALYMNLGPVVDAFIVAMMAAYGSSILASLSALGVEIPGLDHLVKQNIDHEKFKLKEGSKGPSKLIKKGESKK*	common_virus_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0007	cloud	direct	high	452	0.998	GCA_003944115.1_00155
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	154809	155480	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	4544	5215	GCA_003944115_1_1_154	GCA_003944115_1_1_154	-	409812	.	PF07104.11	Protein of unknown function (DUF1366)	MDYKVQSRFFDPITNTTKVAIKQDFPYRVFEEILSNNRTEEDETTLVEAVLNIVRMELDPSGAIVALKKELDKSVDANKEAVRKIQELTQENEKKDVLIQNNKALADWSVLVAVTNEDNPLDPTLFKRALELVEVAQVGKTYKQHDIFTLIDPDHTEQYSEGKRVLVQVNYDFTYNGESVKDLKGPLLQNGKLAIYNWEVPKEDKKNKPSGDLETQPVAQPGS*	hhsuite_tools	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0008	cloud	direct	high	671	0.999	GCA_003944115.1_00156
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	155480	155701	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	5215	5436	GCA_003944115_1_1_155	GCA_003944115_1_1_155	-	409812	.	.	hypothetical protein	MEENILLAIITELNQQLSDKTLNEVEYKVRLNDAQQKIAQLYEEVEVYRSVLDSDKDLKDLFEEIKNKNEVNA*	.	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0009	cloud	direct	high	221	0.995	GCA_003944115.1_00157
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	155714	159592	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	5449	9327	GCA_003944115_1_1_156	GCA_003944115_1_1_156	-	409812	.	PDB:3GUD_A	Neck-appendage-protein	MIYLKEGNIPLNFCFEDDISQEANNTYQLSFKFPVSDDKWASLKNEVHLLADDLSGEQEFVIIDVQKGHGYITVYANQVATLLNGHSVRKIDVDRSNGMTVMNKLVEGLKRECPFTFFSDIQDKHTLRLDNVSVIDALTKGQHSIIGQWGGDLIRDKYSVRLLKNGGIENQSLFMYKKNLSEYKESTTTKSLKTRIHFRKVITASGEGEKEKVLEVTVDSPLVDKYKHIYEYDMEVQDQDVKTLDDLKEYGKKYFQSSLCDLPEENLEINVIGQADQPVKLFDTASIYYELYNVDIRKKITKYSYSPMAKKLKKIGFGKISRSLGGAIGQIINDSVADKIASHDAAYDAKVQQLIDNANDEYDKKAKSLEQDITDGIEQAKAKAEVVKEEINAEISEKIKAANKANKDEIVEEFKAKYNGIEVKVEDLKATANGLSEMNTAIQQEMDSFKASTASKFAGISGAQSHYEQSTNKAISDLMKVTQNKADQAYVEQTTQGIKETISNIKIGRRNLIKGTRLFSGVRGVVGEFNGFKVIRSEITQENQKVVDPFVTNTTVPMIGTEYTAVFWARASRNDYQCVLHLFSPNSVTKVVTSTGFAADNLIDGYAKFAITNEWRPYWVKWTQTPVNVPKRVIFGRHGANYGQKKGDWLEICAPAVFEGNMPGDWNEAPEDATSTFQAEFEKTAKGLETKITSFESYVQADGTRQETLKKYIEDKTASSLTAFREDIESGYISKSKYEEDSRGITRRFEELKTGGQNLVLNSGNPQNMKNWGEISPDSEPTAKIVTSPLYFNGTRNLLAIINRNNAYSMLLSSHRFNVRQKTTYTVGVTLFCSENLKGADLVFFLRRRGSAQLFDKAIDLLEGIQLPSNEAKRFYFRINSEIYDEAFLRFKSSGKTAGDESVLYIADVDVYEGTIERPWQAAEDEAGKKLETKLAEYSQTVDGELKKLASQIDDTIKKTDVNITPGQITFGVGKTINGKTISSLFVQDPESIALISKLIKVKGDMIVDGSILGRHLKTGTLETGHFKAGSVTSEILAANAVTADKIQVDHALISKLIANQAFIRELTSQRAFITQINSIDFSAERMQGGRLLSINKATDFNLNDGSINLYSNTGVIRRIDDTTSSEFIKLNQGGFIGERVRDSKAARIIIGTNHDKTENTENETFAGTRLWSGKSGAENESLYEVVSDRIIFYSNGRYRSPWIIHNNTRDGSSYLIPGNEKGVRHNLGRGDKHFSGAWIDNIFIGKNAYNVGTYLWDLLTCLGQISKYGWDLKNQNIRSHITGVLNKYSFK*	hallmark_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0010	cloud	direct	high	3878	1.0	GCA_003944115.1_00158
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	159589	160293	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	9324	10028	GCA_003944115_1_1_157	GCA_003944115_1_1_157	-	409812	.	PDB:2X8K_A	Distal-Tail-Protein	MAVNHLIINTFNTGTISDSVVTDFGDIKGAIPRYDEQKKLYGTNGQYNIEDGAYDGYERTLKVFVKRYEDAQAIINAFNKLDNVLEFSYQPDSIHYADLLDSEISLHGQNNWIVSIKVYQHPFRYTKNVQEVVLGSSGTVTNPGTVYSEPIITIEGQGEVTLTIGNQTMVLNLSGGAKIDCRQRKQNVYTLNGQLQNTIRVRGPFFELKPGISGITTAGNVSKIKILGNWRYRI*	hallmark_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0011	cloud	direct	high	704	0.999	GCA_003944115.1_00159
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	160293	163562	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	10028	13297	GCA_003944115_1_1_158	GCA_003944115_1_1_158	-	409812	.	UniProtKB:R2PRN9_9ENTE	tail-tape-measure-protein-	MATELGQAYVQIMPSARGISGKIKAAISPEVESAGQSAGETLGGRMVSLAKKAIAVAGIGKFFSASIMEGANLQQSLGGIETLFKGSADTVKKYANEAYKTTGLSANAYMENVTGFSASLLQSLGGDTRKAADVANMAMIDMADNSNKMGTSMDRIQDAYQGFAKQNYTMLDNLKLGYGGTKTEMERLLADATKLTGVKYDINNLSDVYQAIHAIQENLDITGTTAKEAATTFTGSFSAMKAAAQNVLGNLALGKDIGPSLHSLYETAKTFLVGNLIPMIGNVLKGIPHLIYGILQDGLTAVFGEGVAEPILEWVYNTFADISAIANTLFDMIFGSMNKKDNVDFLKSYLGIDEKTASSIVNIGENIRVTFENIGATIGNIAGIVGSFVSDLLGIGGSEQSVNLIASAFEGLTKFLRSASAKLKDFTGWLKGNPAALDALKASVVGITTAWTGYKVVMGVIKGIETARKAILAITNGLMLAQFVRTNALTAAEAANAAATMGASGAFGIFNTVLSANPIGLIVTGIAALTAGLTWFFTQTETGRKIWSGFVSWIKSAWKGIAEFFSGLWKGISDGAINLWNGVVAVWNGVIDGIKSAWQGIKEFFSGLWSGISDGASNAWNGTIEGIKSAWQGISDFFSRLWESITSLATTAWTSITSAVLAIVQPFVDTFMSIWNGMKEGLSQVFEGIKTIFTGAWELIKSIVLGAVLFIIDLVTLDFNKLGEDLGLIWDGIKTAIATIWDGICTYFSGIINTIIGFFTGAFEGLKAFLAGVWDAIKTVAETVWNLITSGIKAIIDGFIAGAQAAWEGFKGFLAGLWEGIKSTAISMWNGICGGIKGIIDAFINGAQAAWDGFKGFMAGLWDGIKTTAVNTWDGIKTGVLTIIDGLVTGAQKFWDGMKKGVGDLCDGVKKLFGGLAHIDLAGAGKAIMNGFLGGLQAVWGGIQDFVGGIAGWIRKHKGPISYDRKLLIPAGKAIMGGFDDSLQESFKGVQKTVGGVAGWISDAVSGDGFDFGNDTAFNRNITSTLQMPNSKYETAESKMVSEIAILRSSLDVWLDKISNKDSNTYLDGEKLAINAYQRQGQIMAREGI*	hallmark_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0012	cloud	direct	high	3269	1.0	GCA_003944115.1_00160
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	163562	163936	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	13297	13671	GCA_003944115_1_1_159	GCA_003944115_1_1_159	-	409812	.	pfam17318	Family of unknown function (DUF5361). This is a family of unknown function found in Bacteria.	MIQTDEDALICDLAETYQIYDYRQLPAYQVAVFSYGLRDDSRIKVAMSGQNVSMQLLIQASILDRLSMLVWFKTKDGQNGINRPVSMVDQLTKVEEEREQMTFSSGEEFENYRNEMLKKIGGGS*	mmseqs_cdd	nonviral_gene	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0013	cloud	direct	high	374	0.997	GCA_003944115.1_00161
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	163951	164220	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	13686	13955	GCA_003944115_1_1_160	GCA_003944115_1_1_160	-	409812	.	.	hypothetical protein	MSEIKSFKGTTSTGFEFDISQKRMENYEVLEVLAEIDSNPLLVPKLLKLLLGEQAEDLKNHVRDEDGMVSTDKLMKEITDIFESQSVKK*	.	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0014	cloud	direct	high	269	0.996	GCA_003944115.1_00162
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	164224	164808	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	13959	14543	GCA_003944115_1_1_161	GCA_003944115_1_1_161	-	409812	.	UniProtKB:F8S0S2_9CAUD	tail-protein-	MGTEAQTTQTTTTSSSLVTTAKPKVGGAIYSAPAGTALPTDATSALDKKFVSLGYISEDGLENENSPESENVKAWGGDIVHSSLTEKPDTFNYTLIEALNLNVLKEIYGADNVSGDLKTGITIKANSKELASHCVVVDMILKDGTFKRIVIPQGKVTSIGTISYKDAETVGYQTTLTAFPNSDGDTHYEYIKGE*	hallmark_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0015	cloud	direct	high	584	0.998	GCA_003944115.1_00163
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	164824	165159	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	14559	14894	GCA_003944115_1_1_162	GCA_003944115_1_1_162	-	409812	.	PDB:2LFP_A	tail-completion-protein	MIEIIVKKYLDGHLSVPSFFEHETTMPKEFVIVEKTRGANKDYAKSATFAFQSYASSLQKAAELNEKVKQVIYDMIELNEISGIHLNSDYNFTDTGTKKYRYQAVFDINYF*	hallmark_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0016	cloud	direct	high	335	0.997	GCA_003944115.1_00164
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	165160	165396	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	14895	15131	GCA_003944115_1_1_163	GCA_003944115_1_1_163	-	409812	.	Uniprot:A0A0C5ADH8_9CAUD	type-I-neck-protein	MGNSSFKLNRAGVSELMKSGPMQKVLSQYASDIQDRCGDGYVKDIHVGKNRANAMVSAKTRKAKKDNLKNNTLLKAVE*	hallmark_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0017	cloud	direct	high	236	0.996	GCA_003944115.1_00165
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	165389	165727	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	15124	15462	GCA_003944115_1_1_164	GCA_003944115_1_1_164	-	409812	.	PFAM:PF10665.8	Minor-capsid-protein	MGRIKGITVTLIETKEKGRDDFGHPIFEEIETQVDNVLVSPTSTDDVTSQMNLTGRKAEYTLAIPKGDTHDWENKEVLFFGKRWKTFGIPLEGIEEMIPLSWNKKVMVERYG*	hallmark_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0018	cloud	direct	high	338	0.997	GCA_003944115.1_00166
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	165714	166109	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	15449	15844	GCA_003944115_1_1_165	GCA_003944115_1_1_165	-	409812	.	PFAM:PF09355.9	head-to-tail-adaptor	MTTFATVEDLETLWRSLKFDERKRAEALLTIVSDSLREEAKKVSKDLDKMVAESPSYSSVVKSVTVDVVARTLMTSTDQEPMTQMAESAMGYSFSGSYLVPGGGLFIKDSELKRLGLKKQRYGVIELYGTN*	hallmark_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0019	cloud	direct	high	395	0.997	GCA_003944115.1_00167
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	166115	166351	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	15850	16086	GCA_003944115_1_1_166	GCA_003944115_1_1_166	-	409812	.	PFAM:PF08198.10	Arc-like-repressor	MEYINVKTGASIITENAISGGDWVPADQVTKVDSQEAADNQGDLTVAQIKARLDELGVEYDKGAKKADLLALLEQHEG*	phrogs_hmm	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0020	cloud	direct	high	236	0.996	GCA_003944115.1_00168
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	166355	167251	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	16090	16986	GCA_003944115_1_1_167	GCA_003944115_1_1_167	-	409812	.	PDB:3JB5_B	Major-Capsid-protein	MTDQLSRGTLFDPMLVTDLINKVKGHSSLAKLSNQQAIPFNGLKEFTFTLDSDVDIVAENGKKTHGGASLEPVTIVPIKIEYGARVSDEFVYASEEAKIDILKSFNEGFANKVARGIDIMAFHGINPRTKQESSVIGDNCFDKAVTQTVNFTTNDPDTNVEDAVKMIQGADNIVSGMAIDTTFASALASMKNAANERLYPELAWGANPGAINGLPVDVNTTVGLNVGTNKDVAIVGDFANMVKWGYAKQIPLEVIRYGDPDNSGKDLKGYNQVYLRAEIYLGWGILDKNSFARVVKAG*	hallmark_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0021	cloud	direct	high	896	0.999	GCA_003944115.1_00169
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	167266	167733	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	17001	17468	GCA_003944115_1_1_168	GCA_003944115_1_1_168	-	409812	.	PDB:6B0X_d	Major-Capsid-protein	MRMSEFKPITTQEEFDAAIKARLSREKEKYGDYDQLKSRVIELEEENVGLKSIIEATNQSKADSDKQLEEMQKQIAGYETASLRTRIALQHGLPYDLADRLQGADEESLTADAERLVSFVKPTEHVAPMRNLEPAIEKNENTSYKNLVQGLVFED*	hallmark_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0022	cloud	direct	moderate	462	0.987	GCA_003944115.1_00170
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	167809	169221	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	17544	18956	GCA_003944115_1_1_169	GCA_003944115_1_1_169	-	409812	.	PFAM:PF03354.14	Large-Terminase	MARKKLGNQNPTQSVILKYVKKNSKAKEAIELYERTGLSCYAWQKNLLLPLMAVDKNGLWVHQKFGYSIPRRNGKSEILYIAEIWALHKGLNILHTAHRISTSHASFEKVKRYLEKMGYVDGEDFNSIRAKGQERIELYSTGGVVQFRTRTSNGGLGEGFDMLIIDEAQEYTTEQESALKYTVTDSENPITIMCGTPPTPVSSGTVFTKYRETCLFGKGKYSGWAEWSVPDEKEIDDVEAWYNSNPSMGYHLNERKIEAELGEDKLDHNIQRLGFWPTYNQKSAISETEWNELKVDDVPELSGKLSVGIKYGQDGTNVALSIAARTKDGRFFVETVDCQSVRNGNEWMVAFLRQADVAQIVVDGASGQKILDEELKDYRIKNVILPTVKEIIVANALWEQGIYQKTICHSGQPSLSKVATNCDKRNIGSNGGFGYRSHFDDMDISLMDSALLAHWACATAKPKKKQKISY*	hallmark_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0023	cloud	direct	high	1412	0.999	GCA_003944115.1_00171
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	169330	169569	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	19065	19304	GCA_003944115_1_1_170	GCA_003944115_1_1_170	-	409812	.	.	hypothetical protein	MKNDYEEVNWSEYCYKENDGDKTWWVDTSWFARGLMLFTFDKKKFYNLFEDYPHNMTLEEVEIFDKENPFWAEFFSDRK*	.	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0024	cloud	direct	high	239	0.996	GCA_003944115.1_00172
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	169559	170950	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	19294	20685	GCA_003944115_1_1_171	GCA_003944115_1_1_171	-	409812	.	PFAM:PF06152.10	minor-head-protein	MEYDVLPAILQEVQERFESDFGKSEIVRNAFETLKAKKATYKTANEFAIEVGEILSKALRASLIADKLPDGKMYYNIAQRLLSDVLGRNYEIISGYTRDVQKKLNTDAKISLKVQVPELNQDRIAGIVNRLASEENFEDVSWLFGEPIVNFSQSIIDDSIQKNAEFHHKSGLQPEIVRKSYFHCCDWCQEVQGSYKYPRVPRDVYRRHQRCCCTVDYDPKSGKVKDIWSKIWRKTDESDKIEARKDIDGKAQMSEVRKLALQEGISSNPIKKSRKKLTEEQIINAVGGGDKTKGSCSSAAFAYIGNKGGYTVLDFRGGKSCDFFSRDSRIQMIGNLPGVKMHVVKNTNDFTAVRGLLEKVEAGNEYYLATGRHAAVIRKNEGRFEYLELQSRISNGFKPLDNVVLKERFKCKKTHSTRHGKYEVDSYIIDSNSLKDNPEFHNLLSFINTAGSKQMKGIEGHEK*	phrogs_hmm	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0025	cloud	direct	high	1391	0.999	GCA_003944115.1_00173
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	170940	172208	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	20675	21943	GCA_003944115_1_1_172	GCA_003944115_1_1_172	-	409812	.	PDB:2JES_G	Portal-Protein	MELRGIDYLRRKLESCRARVNLRYKYYAMQNYEPQIGITIPAHVRAQYKSTLGWTSKGVDSLADRLVFREFGNDIFEVTDIFRQNNPDIFFDSAILSALIGSCSFVYISKGKNEEVRLQVIEASNATGVIDPITGLLTEGYAVLSRDDYGSPTLEAYFKPNETRFLPKGDKPYSIENPANIPLLVPIIHRPDAVRPFGRSRITRAGMYYQKFAKRTLERADITAEFYSWPQKYIIGLDPDAEPLEKWKATVSSLLTISASDNGEKPSIGQFTTASMTPFTEQLRTAAAGFAGEMGLTLDDLGFVSDNPSSVEAIKASHENLRLAGRKAQRSLGAGFLNVAYVAACLRDEFHYARSEFVRTTVKWEPLFEADANMLTMIGDGAIKLNQALPGYINAETIRDLTGIAGDMSAVPAVNEGESDGI*	hallmark_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0026	cloud	direct	high	1268	0.999	GCA_003944115.1_00174
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	173034	173600	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	22769	23335	GCA_003944115_1_1_173	GCA_003944115_1_1_173	-	409812	.	CDD:cd01192	site-specific-tyrosine-recombinase	MRKVEPIRDTDDIERMKDYLRDKNERDYVLMVTGLYSGMRISDILPLKVKSVKGSHIEVTERKTGKTKRFAINPALRKALDHYIKENDLKDYDYLFPSRKKVNSEGLRITHIGRVAAYQILRDAGEHTGLTNIGTHSMRKTFGYHHYRKNQNVGILMELFNHSSPDITLGYIGFKQDELDNSMLNFSY*	common_virus_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0027	cloud	direct	high	566	0.998	GCA_003944115.1_00175
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	173703	174170	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	23438	23905	GCA_003944115_1_1_174	GCA_003944115_1_1_174	-	409812	.	PFAM:PF05263.10	transcriptional-activator	MEYSPEGIPLLPEINEQETIRRAESKLEEYHRWKIIACESLEQKITQSFTIEPRGGGGPSKQVEKLGIRRADATSELEAIEQSISNIFDTDYRCILINRYVRQPKLQHSEIARLLHIENTRYFEMRNMALLAFAEQYRNAVLVVEKRSNCGVNAE*	phrogs_hmm	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0028	cloud	direct	high	467	0.998	GCA_003944115.1_00176
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	174185	174529	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	23920	24264	GCA_003944115_1_1_175	GCA_003944115_1_1_175	-	409812	.	PFAM:PF10078.8	transcriptional-regulator	MELRLKELREDLGLSVSDVSNETGISKSSIRLYEKGGTPSIKQIEVIARIYDVPPAWLIGWVNKREEKMPLVKVIEKVVYREVEGARLPPYHNNDNDGRLIKWKESVRLVPIQK*	phrogs_hmm	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0029	cloud	direct	high	344	0.997	GCA_003944115.1_00177
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	174545	175321	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	24280	25056	GCA_003944115_1_1_176	GCA_003944115_1_1_176	-	409812	.	PDB:4M4W_K	Replicative-helicase	MSLYNYVEQNLTSCDQVCSKHGEQMFVIRGVDKKVCFACAKELIEKDEKKLQDEFWEQEDKRLEARRIDVLFNSSIVNSELKQATLGNYQVTDQSQKDKLNAAIRIADGYVSGDTNNVLFLGPAGVGKSHLAYGIIKQVSDKTKKHAMFIKIPELLARIRSDFGSSDQTQQKWVSRLSKVPYLVLDDLGTEKVTDWSKEILFSILDNRNCTIITSNLKSSAQIGEVYGQAIMDRICKGVDKDHGISFEGMKSQRRKFY*	rep_hall_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0030	cloud	direct	high	776	0.999	GCA_003944115.1_00178
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	175318	175476	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	25053	25211	GCA_003944115_1_1_177	GCA_003944115_1_1_177	-	409812	.	.	hypothetical protein	MVSLQEVIEAFEKQFYPLGEMQKDMMINHPDPRAVLGKLAFMMDCSRSGGST*	.	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0031	cloud	direct	high	158	0.994	GCA_003944115.1_00179
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	175486	176352	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	25221	26087	GCA_003944115_1_1_178	GCA_003944115_1_1_178	-	409812	.	PFAM:PF09681.9	replisome-organiser	MSEIKWIKITTDIFDDEKIRLIDALPERDAILVIWFKILTLAGREGGNGLLMMNNRVHYTDEMLSTLFSRPLNTVRFALATFEKYGMIEIIDGIISLPNWEKHQNIEGIEKIKEQTRKRVARHRENQKKLLESNVTCNVTVTQGNATDIDIDKELEEDKEEELKKHIGQVEDIVLPGWLDENALVEVQKSKPKNYASRIPIAYLNQKTGKSFKFVEKNVNFVKSRLKEGYTLEDFKQVIDLKVSQWLHDTNMNKYLRPETLFGTKFEGYLNERPMKQAQILPDNDIGI*	rep_hall_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0032	cloud	direct	high	866	0.999	GCA_003944115.1_00180
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	176355	176615	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	26090	26350	GCA_003944115_1_1_179	GCA_003944115_1_1_179	-	409812	.	.	hypothetical protein	MDNLKNNDFINNMKSVIEEYEFLKDEVKRCYHDMEEYEAKIDNLEMQKMNLVEALARKTWEDMEQTASKRKQARKWHAHMRIRKGI*	.	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0033	cloud	direct	high	260	0.996	GCA_003944115.1_00181
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	176625	176885	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	26360	26620	GCA_003944115_1_1_180	GCA_003944115_1_1_180	-	409812	.	.	hypothetical protein	MRLKIYRKESQHRDYYYVYLISGNFYGDNYYANIYDNSVMIDNFEDFAYWFEQQIYYLTLDQFEKIDGTWLCMMIRNYEERDQLPF*	.	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0034	cloud	direct	high	260	0.996	GCA_003944115.1_00182
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	176895	177293	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	26630	27028	GCA_003944115_1_1_181	GCA_003944115_1_1_181	-	409812	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MINNVTLIGRMTRDAELKQTPNGQSVAIFNLAVNRNFKNSDGEREADFINCVIWGTNAENLANWTKKGALIAVVGRIQTRNYENQQDQRVYVTEVVAEKFQTLEKKDNAANANSLYDQAPNIPDVSDDDLPF*	common_virus_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0035	shell	direct	high	398	0.997	GCA_003944115.1_00183
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	177290	177565	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	27025	27300	GCA_003944115_1_1_182	GCA_003944115_1_1_182	-	409812	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MTEIKLILFMASCIISFYAGAVLSKPKQPIIIYQVNNAGAEMHGRITDKEIIDGRYTVTAGAYGKFLVTEKQYNQLGIGDEIPDYLKGRGK*	mmseqs_cdd	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0036	shell	direct	high	275	0.996	GCA_003944115.1_00184
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	177598	177780	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	27333	27515	GCA_003944115_1_1_183	GCA_003944115_1_1_183	-	409812	.	.	hypothetical protein	MKIAKYTHTGFDGVKTIKGWVLVNNYGEKEFVYYNGTELCVHPASDWEGELKEVQDDTKI*	.	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0037	cloud	direct	high	182	0.995	GCA_003944115.1_00185
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	177793	177957	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	27528	27692	GCA_003944115_1_1_184	GCA_003944115_1_1_184	-	409812	.	.	hypothetical protein	MERPERYPNGHFIPELIEDEDIIFNKDSEYHKQKKKEKKNPIFKRNKPKNRWAL*	.	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0038	shell	direct	high	164	0.994	GCA_003944115.1_00186
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	177957	178694	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	27692	28429	GCA_003944115_1_1_185	GCA_003944115_1_1_185	-	409812	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MSKKELVKTLMERMQKFGYFPSFTNVKIFIQEYEKLAKPEPQAGHADEAPRYVRNVIARLRELPFHDREVWLKAIMDEFEEDFSHSIWREGYEQGKSEGAWVGQQLKDADKIRRELNRPIVPQFVAEIIEYYKRNNATLYDALREKNFNKQYSEWLLNEQNAYDKVAKAWLDGYDVEKEKRYLVKMKGVHPGSVYLKRQTEDDYWYFGVNSENKCIAIKHTRKELEEAGFGWIFSCKGVEVEEAE*	mmseqs_cdd	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0039	cloud	direct	high	737	0.999	GCA_003944115.1_00187
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	178687	178953	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	28422	28688	GCA_003944115_1_1_186	GCA_003944115_1_1_186	-	409812	.	PFAM:PF11753.7	nucelotide-kinase	MKEKSYEQVLDEMIEEDKVNNPNHYQGKFGLEAIEVVRNFAGNLTAVQGFYWGNAIKYLLRFQGKNGLEDLKKARKNLDWLIEEMGNE*	common_virus_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0040	shell	direct	high	266	0.996	GCA_003944115.1_00188
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	178964	179221	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	28699	28956	GCA_003944115_1_1_187	GCA_003944115_1_1_187	-	409812	.	.	hypothetical protein	MSEVLGGIITLMMFFMMGAFCQYLEWRKAEKKREAEELLDLQAMYVLAAQEYAVRQAVLRSQEERKKRTFKMRNWDEEDLSGCRK*	.	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0041	shell	direct	high	257	0.996	GCA_003944115.1_00189
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	179214	179495	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	28949	29230	GCA_003944115_1_1_188	GCA_003944115_1_1_188	-	409812	.	.	hypothetical protein	MSIRDEIHFLKNENVYLSRTLADLKLIVIGLSLCLLVAAVFVVKIEDDRNHQIKDLRSQITDNRDSMRNNAIRISYLEQDDKLIRERVGLNNE*	.	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0042	shell	direct	high	281	0.996	GCA_003944115.1_00190
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	179544	179810	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	29279	29545	GCA_003944115_1_1_189	GCA_003944115_1_1_189	-	409812	.	PFAM:PF12964.6	HTH-DNA-binding-protein	MNILSEEFENGIRTVVRTQFKESFTEFLDQEMAEKRWLSLESAAYYADCSSNTIRKWIKMGLNLYKIDGTKRIDKNELDTFIQENIVI*	phrogs_hmm	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0043	cloud	direct	high	266	0.996	GCA_003944115.1_00191
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	179890	180318	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	29625	30053	GCA_003944115_1_1_190	GCA_003944115_1_1_190	-	409812	.	pfam10552	ORF6C domain. This domain was identified by Iyer and colleagues.	MTSEIMQVNQNELTQEDILIQVLQTQKELKQNQETLAMDVDYLKNEQPINPSVCLALENIRKKKVVALLGGKDSQAYRDRHFAQSVFAQAAKDFKDYFRIPRYDLLKRKDEEQAFDYWNSWEPSANTKLEIKARNGQMSLVG*	mmseqs_cdd	nonviral_gene	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0044	cloud	direct	high	428	0.998	GCA_003944115.1_00192
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	180315	181223	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	30050	30958	GCA_003944115_1_1_191	GCA_003944115_1_1_191	-	409812	.	PF03677.13	Uncharacterised protein family (UPF0137)	MNEVTLSNNLTQIELEISHHKQIAGQSIWEIGRRLNHVKENDLAHGQFMEWYQSLGIDKDFASKSMKIAKELPNFETLRNLGTTALHLIATLPEDEQKAQINRIEQGDSPTVRELQELKNKLKLSQKANELLKAENEKIKSSKVEVKETIKEVIPDDYKATQDLNKQLLEKNKELSRSAKAMEERSEFIEKQLKDTLAQREEVDKKSVQYDELTRAIEESQGQLNSVQKQISAYKNITCLLQKGNDFLASMGGLIYADEEKVLKADGIIRNEFDSFISRGLRFFNDLNDIRKESDILEGELL*	hhsuite_tools	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0045	cloud	direct	high	908	0.999	GCA_003944115.1_00193
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	181238	181450	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	30973	31185	GCA_003944115_1_1_192	GCA_003944115_1_1_192	-	409812	.	PFAM:PF10078.8	transcriptional-regulator	MSQQHRKWIELVKERIEKRGWSQTDLAIVVGVSPSAITQLLRDGKGSDDLKLRINKKLKINESWEKFEEF*	phrogs_hmm	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0046	cloud	direct	high	212	0.995	GCA_003944115.1_00194
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	181754	182101	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	31489	31836	GCA_003944115_1_1_193	GCA_003944115_1_1_193	+	409812	.	PDB:1PRA_A	Repressor-protein	MFSTFEIVKDLCEKQGISLNTLEEKLELGKNSLYGLKRNQPSAERLQQIADYFHVSTDYLLGRTDNPNIANGGDASAPLDLRDIAAQSMLFDGKPLTEEDIDFITAVLEAHLKNK*	common_virus_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0047	shell	direct	high	347	0.997	GCA_003944115.1_00195
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	182113	182499	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	31848	32234	GCA_003944115_1_1_194	GCA_003944115_1_1_194	+	409812	.	PDB:3DTE_A	IrrE-protein	MTVQELCAVEGVNLCYFDGKEWHSQGFYNPVLNVLALDIRLSDDDQKKVALHELGHREHLPCNYQANREKCELQANRNMIHHLLEAELKELDDVSNFNYVRFMEMYKLKTIADEAMVKEEFYNLINNI*	common_virus_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0048	shell	direct	high	386	0.997	GCA_003944115.1_00196
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	182512	182883	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	32247	32618	GCA_003944115_1_1_195	GCA_003944115_1_1_195	+	409812	.	PFAM:PF09151.9	zinc-finger-domain-protein	MSFKGFLKAKTVGEFLQARKDPELMKEIENRSVKTVLENSVEVTEQNNALKKQKMLEKNAIKCPHCKSKNVSFMQQGKKAFSVGKAVGGAVLTGGIGTLAGFAGKKGKKQWHCQDCGNVFETK*	phrogs_hmm	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0049	cloud	direct	high	371	0.997	GCA_003944115.1_00197
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	183018	184121	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	32753	33856	GCA_003944115_1_1_196	GCA_003944115_1_1_196	+	409812	.	PDB:1Z19_B	Integrase	MIKKYKKGDGFAYYFKAYHGIDPLTGKKIVTLRRGFKTEREARLAEAKCLADYEKKTFRSRNTTTTFNQVYETWKAHYRNTVKESTYVSQIDKADRLIIPHFGDKPINKISLTMCQTQVNKWAEEYKRFFGIISITNQIFDYAISMELIDSNPMKKTLKPKRQKNNTDELEKFYNKEELKEFFKIVKGFDDNEMLTYFRLLAFTGMRKNEISALRWSDIDLKKGQITVNQTLAKGEDNKLIFQTPKTKKSARTITLDSKTIKVLKDWHKYSTKGLLFKNENGEPKSVVHVNNMLNRIWRKYPDFKRITPHGFRHTHCSLLFEAGATIKEVQERLGHENIQTTMDIYAHVTQKAKNEVADKFASYIGF*	common_virus_hmm	common_virus	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0050	cloud	direct	high	1103	0.999	GCA_003944115.1_00198
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	184207	184500	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	33942	34235	GCA_003944115_1_1_197	GCA_003944115_1_1_197	-	409812	.	PRK05435	50S ribosomal protein L27; Validated	MLKMNLANLQLFAHKKGGGSTSNGRDSQAKRLGAKAADGQTVTGGSILYRQRGTHIYPGVNVGRGGDDTLFAKVEGVVRFERKGRDKKQVSVYPIAK*	mmseqs_cdd	nonviral_gene	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0051	persistent	direct	high	293	0.997	GCA_003944115.1_00199
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	184518	184862	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	34253	34597	GCA_003944115_1_1_198	GCA_003944115_1_1_198	-	409812	.	COG2868	Uncharacterized conserved protein YsxB, DUF464 family [Function unknown]. 	MIHAVFERAEDGELRCAEITGHAGSGEYGFDVVCASVSTLTINFVNSIEKFAGYEPTLELNEDQGGFLRVEIPKDIAPNQREMTQLFFESFFLGMANLSENSSEFVQTRVITEN*	mmseqs_cdd	nonviral_gene	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0052	persistent	direct	high	344	0.997	GCA_003944115.1_00200
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	184878	185192	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	34613	34927	GCA_003944115_1_1_199	GCA_003944115_1_1_199	-	409812	.	COG0261	Ribosomal protein L21 [Translation, ribosomal structure and biogenesis]. 	MSTYAIIKTGGKQVKVEVGQAIYVEKLNVEAGQDVTFDEVVLVGGEKTVVGTPLVAGATVVGTVEKQGKQKKVVTFKYKPKKGSHRKQGHRQPYTKVVINAINA*	mmseqs_cdd	nonviral_gene	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0053	persistent	direct	high	314	0.997	GCA_003944115.1_00201
GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote	cenote	CDS	185411	186004	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C14	35146	35739	GCA_003944115_1_1_200	GCA_003944115_1_1_200	-	409812	.	.	hypothetical protein	MSDWYYFWRGLAGAFSWEKGQDNALIGGEPSWTYLLGLSINFLVILGIFGLVLFGFYKTKVQAGSWKAAFGVFWDNLFLRGRARGILGLIVGFPIIFIAIPFYAGYRVTNGVWRYNYFTNQETVTKTVLLSELDTYVGSRKSGSSSITLTVFTGNEKRTVNIANSSQTLARTLKSELKTPTMIDVEVNKEGQIIFVH*	.	hypothetical_protein	C14	35739	150266	186005	GCA_003944115.1|RJPD01000001.1@region_150267_186005@tool_cenote_CDS_0054	shell	direct	high	593	0.998	GCA_003944115.1_00203
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	302036	302287	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	1	252	GCA_003944115_1_1_311	GCA_003944115_1_1_311	-	409812	.	.	hypothetical protein	MKIINTEIAHINESKLGFEHWVDVTYTAPILKGTYTIRVMLLLAFKTEDPEVIDYMVREWKRRDTIHHSFLMYEQEKVWISES*	.	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0001	shell	direct	high	251	0.996	GCA_003944115.1_00313
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	303080	303433	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	1045	1398	GCA_003944115_1_1_312	GCA_003944115_1_1_312	-	409812	.	.	hypothetical protein	MKVTKYNKVYEVSEKEVEKQIRIFTDMLKMNEDGEYTGPVASEAVSKEDIDKEIKQLKEKIKKLTERDNDTIAYLLVWTEEDAERVRRERKELGFGDLYDELFEDDAEAEVFSKPVE*	.	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0002	cloud	direct	high	353	0.997	GCA_003944115.1_00315
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	303588	304217	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	1553	2182	GCA_003944115_1_1_313	GCA_003944115_1_1_313	-	409812	.	PFAM:PF05551.10	HNH-endonuclease	MAKNRLKKWISYDERHGEYIFTRRYKGRKISKGRKKLEEIEEISDLIDQYIKLFDELPYLGNERMTIDYNSLLGKTFGELKVMGVVLINNQRMLYCHCSCGKEVYYKAFGVINGKNKSCGHLEGQALKTRNAELKEIQRNIDKPLSTNKTTGHKNISYNKEKNAYDVELTRYGVKMRKRFKTLAEAVDFKEEVIDAIKKDGGKIPNKYL*	phrogs_hmm	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0003	cloud	direct	high	629	0.998	GCA_003944115.1_00316
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	304225	304539	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	2190	2504	GCA_003944115_1_1_314	GCA_003944115_1_1_314	-	409812	.	.	hypothetical protein	MKFELFKELYDEALEIASLELYVAERGWQDWMEGHAPDEVAELLSRVYHLANNPLKDTRQVSRAEFSRRYGIPVRTLQDWDLGNRNAPEYVKLLLDFAQFTNDL*	.	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0004	cloud	direct	high	314	0.997	GCA_003944115.1_00317
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	304555	304842	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	2520	2807	GCA_003944115_1_1_315	GCA_003944115_1_1_315	-	409812	.	.	hypothetical protein	MLVGVSQKNDFGWSAQVVKFPNLESAEAWLNKEQFDFRDRYIFDDEEEALNHLKEIKSVRWAKEALKDADTLTLLDNGEFDVEMSDSYIYKMMTR*	.	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0005	cloud	direct	high	287	0.997	GCA_003944115.1_00318
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	304857	305171	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	2822	3136	GCA_003944115_1_1_316	GCA_003944115_1_1_316	-	409812	.	PF07410.11	Streptococcus thermophilus bacteriophage Gp111 protein	MINVNNTNSAELENVVVDGQLCLSASKRQPVWVAEIVGTHPVYKLDRKFIDEDESGAGWKAWNLEENKIYCINPSANKKDQYFVVLVDGALNELTKGQVEEMVK*	hhsuite_tools	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0006	cloud	direct	high	314	0.997	GCA_003944115.1_00319
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	305355	306206	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	3320	4171	GCA_003944115_1_1_317	GCA_003944115_1_1_317	-	409812	.	PFAM:PF05382.12	peptidoglycan-hydrolase	MADIASWFEARQGTITYSMTGSRNGTDGTGDCSGTISQALKDNGFAIQGLPSTVTLGAQLARVGWVRISRNEDWNAQRNDIVMLAWSADMSGSGGAGGHVGAMRDSVNFISCDYSTQGAPGQAINTYPWDYYYNANNPAYIEVWRYNGNAPEKPLPNTAVAPSSSRKPSSKAYYLANDVQLVNDIYQIKCDYLCPVGFDFIENGIPVSLVNWVDENGNHVPDGEDKDFKAGMYFSFEVDEAHITDTGDGGYYGGYYYRSFEFGQFGTVWLSVWDKDDLVNYYN*	common_virus_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0007	shell	direct	high	851	0.999	GCA_003944115.1_00320
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	306229	306411	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	4194	4376	GCA_003944115_1_1_318	GCA_003944115_1_1_318	-	409812	.	PFAM:PF16945.4	Phage_r1t_holin	MKTFAKKLGIKVIKTMSQAALGVIGSSALLTEVNWAVVASTIALSGLTCVLMNLSELKED*	common_virus_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0008	cloud	direct	high	182	0.995	GCA_003944115.1_00321
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	306430	306708	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	4395	4673	GCA_003944115_1_1_319	GCA_003944115_1_1_319	-	409812	.	PFAM:PF04531.12	holin	MPGYERFILQLGLSLIPVLGLYLSMRDRATKEENRNTIMEKDIENLREFKASASKRLDNHDEQNKAILVLAEQVKVLSEDVRELKTLITSNR*	phrogs_hmm	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0009	cloud	direct	high	278	0.996	GCA_003944115.1_00322
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	306721	307290	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	4686	5255	GCA_003944115_1_1_320	GCA_003944115_1_1_320	-	409812	.	PF07104.11	Protein of unknown function (DUF1366)	MTFEVKDASGQYGPDGTVIKTIVTIYQQQPYYATAAFPLDGDHTRREANELLEMIKQEFFKEHYTAYAFKELDKSVSSQNEKVDKLTKLAEATVLAVATNKDNPVDPTIYKRYLELIDPAVTGKLYHAYDVFSLEDASHEEKYGEGKRVLVQVNKDFTYDGQSVSEFKTGGSLELAGVGAAFPWVMPKE*	hhsuite_tools	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0010	shell	direct	high	569	0.998	GCA_003944115.1_00323
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	307287	307487	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	5252	5452	GCA_003944115_1_1_321	GCA_003944115_1_1_321	-	409812	.	.	hypothetical protein	MTDKINQDIINDLGIQLANKIIEASEYKSRLIAVQGELDAFRAVLARNDELRAKFEEEQAKGENHQ*	.	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0011	shell	direct	high	200	0.995	GCA_003944115.1_00324
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	307502	311140	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	5467	9105	GCA_003944115_1_1_322	GCA_003944115_1_1_322	-	409812	.	PDB:3GS9_A	tail-protein	MITFLDEKDNEYNAQVAYSTTSSVNGELSIKGTIYTNQMVLHGIDRGWRLRLDDEYYRIIYAKPNDTGRQIEVEFDAVHQFFYDMSKMSLYETLEGSKPIRTYLDAIFKGTSYRYVLEVEVGSIRKENFGNKSRLNLFNDLIKHANLEFSVSGHVVRILKNIGTDQSAIVRKNFNMNELTIEKDINSFVTYQRGLGMWKDEENHDLGRYEAVYESPLAQIYGRIEAEPVVDERYKETGKLLERLKTNVDNSYKVSISIDMEDLTKAGYKLSEPRAGDYIMAVNETLGLRKKIRIVSLISEYDVSGKLINRKVTCNDIGSVKRNSGEMSTLSKSVTDSLENSAKALDVATQALTSADGKNTNYFGDKKPADIPKGTLKKGDRLFLTVGDKKVLYFWNGAEWELEPTEFDSDKFNAEFDRKAEAINKNIQQAKNEASEALTKAGAIIDSQELLDKINAHLYSDANNDDNGILGRKFRQQREANRSTRDIATSTRDKLTDYQRTNDENLVRIGQQLDNTVSKAEMKQTADGIRETIAKITVGARNLMVGTKDFSGDWFNKTKWTLEQEKYLGLSVYSRQEEWLGLSEVVEVRLGETYTFSAYVKSSIENDLVFMYLDNRLVEPRASLSLVRKDISVGTNWTRVSATFSVTKAGLMTPRFERNNKNAKLFVAGYKLELGNVPSDWSQAIEDTNQIIDDKITTFDRTIDGIRSTVAEAKSYIDADGQRKQELNQLIRDETAKGINTVLSTVEQSGYAKRTEIQSITETQRLYDRIIGTTEDGIKQNIARMTLTDSLFQTEVSKVVNQELTSSNYVANPFTMSDYVRKYFGKGDTSTVSLVSSSLSAFGKLEFHANSRLTSNDAVWLPLNRIPERVKDLSFSIVVEGIDKCKISVYVGTERSSTYISYKRQDNTLYGTLTGINSDYRSSDGVYLKLSFEGLNGQSVFLQKPIVVEGREPKFDFEVNKRMEVDQAVRSVQTQLAGSWAIKNLNSAGDLISGINLGADGRNRITGKLTHITNETLMDRASIKSAAIESITADQITAGTLNASRINVINLNARSITSGTFRGLEYEGGIIRGNNGNTIINLNTNVTTYNGTARIEFKSPQNCLVHSSGGTHAFLTPTQRGGTSYAAWAFGVGGSALDTNANFTGIKIFNDPGAREVILIGDVRFVKDTFTRNAPATALTDILSQIQYNFVQIKNWFQRSDLGYPGLYDIGL*	hallmark_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0012	cloud	direct	high	3638	1.0	GCA_003944115.1_00325
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	311153	312016	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	9118	9981	GCA_003944115_1_1_323	GCA_003944115_1_1_323	-	409812	.	PDB:2X8K_C	Distal-Tail-Protein	MDLLITHANAETKLSQLGIYNIKIADSTPSVEVARRTVKGRSGYIHDGVYLRQKTIKVSGRLAVASLSAFMEKQDELAGWLYGDEPYFVTKMHPTQDDLYEFELPGAKNGDLNLLDIPHTAWKYRYKVHINNEIEYSFIGKSQAGLKYDVSFELATAELPFGETKPTDITLSGGTIPYNGTAALNQLETPYTIELASSAIQNSFFLEIDGRRWSYVHTETAIQAGQKLLLSGVESTLYKGVATSDLNINNRTNYEYFVIRPNPQKQVRYSTNFRGTIRIIGFKELYK*	hallmark_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0013	cloud	direct	high	863	0.999	GCA_003944115.1_00326
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	312029	316534	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	9994	14499	GCA_003944115_1_1_324	GCA_003944115_1_1_324	-	409812	.	PFAM:PF10145.8	minor-tail-protein	MSYDGSIFAFIGADTKDYEKAMNDVIATTKKAFDNAQKAAVNSSNQMIQKIGQLMNELASNTGSIGSKIGQGLKGGLNIALGEIQRIASNIGQRLPEPIQAGLNKISQGFASLGAKISGALSPITSKVSSVGNAISQKLGSAFSTVSNKASNFVNQVGNSLGGKLIGKISSLSSKITSGLGNAFQQAGSKATNALMGIVNHTNQAASATSNLIKTALGISAAYAGFNFIKNAIGGAVTKSADFEARMSSIKAVTGSSADVMKQFHDAAIKAGADTAFSATEAADAIEELSKAGVSTKDILNGGLTGALNLATAGELDLKEAAEIASTALNAFKRDNLSVVDAANQLAGAANASATDVHELKYGLSMVAPVASGLGLSFKDTTNALAVFAQNGLKGSDAGTSLKTMLMNLQPQTKGQYNAMKQLGIITEDGSNKFFTAEGKIRSFAEISQVLKESLSGLTQQQQQQALKTLFGTDAVRAATIAMNEGADGANKMQAEISKVTAAEVAAEKLNNLKGAIEGLSGSFETLQIKLGESILPLFTTIVKYVDKLVDKFSQSQAVQNFTDAMATINPVLDHFLNGTKLADGTMEKFKSTMSSAAPILSLIGGLLVFSPATKGLTLLTGLLGGLGGKIISFGGVIGGVLNNAAGYIGAFSAKIGGIPGVLGGAASKGVSVLGMMSQGIASVMSVALAAIGPAAILGLVVAGLGIINNQFGAQIDQLLNTVTTKGPQIIQNLVLGITTQIPALIASGADLIAKFANAFATMFPVLVQAGVDLIGSLVQGVGQNATSLISSAITVIGTFVQSIASALPQLLGMGVELLANLVQGVLNNLPQILQSAQQAATTFLTGIGQQMPQIIQNGIQILQNLVNGVIQSLPTILNIAVQVITSFIQGIVSNLPAIIQGGIQLIMSLVTGLINALPQIAQSGAQIIGALIKGLATAVPQLIMGGVELIAKLVFGLITGIPKIVEAGGKIIGELGKAMLGAIPEAIGNVAKSVGDFFGGMWDWITGKTDEGAEKVKAKTSEMADSVSSKTSEMSVNAQNNVSALKEGVQSSISMLSLNATNSSATMMTNVNNNMLGMQTNATMQAQMMQANVGTSMDLMGVDTLNKATNMQTNVDATMQNMTANASLNAQNLATNVSTSMSQAQMNATAQAQAMQTNVDTSLNTLNANAGTTMQSLQNVSNTAFQGVNAGATASTAQASANVQANYNAMQTSAQINTAAVQAVTATNLAAAEMVAQIKTASIANIVTSNLKKAETSTTNAMNGIAKSITDGLNKVNQVASSAGNRIAQSFVNTFNKARSATQSGMSAVVSAIQSGMSRAVSVSQSTSSSIVSAFSHLGSSLENVGYYAGIGLYNGLAGMAGSLYSLAYSIASNIASVMRSALDIHSPSRVTSSIGSFTGEGMYNGMSDWVKKINGVAKQYATAITDQRYGVDSLITTSASVNNTGLRSSLENLSDDVRNSQLSDTKFEIHNEIVGDKIYTSVKEREARLRAKDDYFVYE*	hallmark_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0014	cloud	direct	high	4505	1.0	GCA_003944115.1_00327
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	316866	317339	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	14831	15304	GCA_003944115_1_1_325	GCA_003944115_1_1_325	-	409812	.	PFAM:PF12363.7	tail-assembly-chaperone-protein	MEIKLGNKVIEIKFDYRLMFKIDKEMATKDENGQSSGNGVGALFFKIVNRDDQGIVDLIQFCGSKKGKAVTEDEALSAIEDYFENAESDDPQEELFKEIETEMVQSGFFKKKILKYIENMKLGKELAESQAKDNDPTAIAQVKAISEIIGKMESVVS*	hallmark_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0015	cloud	direct	high	473	0.998	GCA_003944115.1_00329
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	317403	317987	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	15368	15952	GCA_003944115_1_1_326	GCA_003944115_1_1_326	-	409812	.	PDB:5A21_H	major-tail-protein	MAEKGQVKITTAKPIVGKKVFYFIQSIHAEKGDGALLPAYRTDGTTTLGGEYQDEQTQQGRLLEKSSDEHSIELTQYFAPMDPSVKVILDAQATGESIKIWRVIVDDSVKTQIGEDPNKKDAYPAKFGYAKITDDVEFNDGVEEFVELSYTAGIVGRLQDGKFPLSAEELAVLNNIYAYQNPGETTGDYDNIQH*	hallmark_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0016	cloud	direct	high	584	0.998	GCA_003944115.1_00330
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	318003	318362	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	15968	16327	GCA_003944115_1_1_327	GCA_003944115_1_1_327	-	409812	.	PDB:5A21_G	tail-completion-protein	MDSPTTKLLKDLRKRLEPLGLPIHFKLPDASVAEPFLVVGGIISDTSKTAQTGLIIEDSTVQIDIFLPGNKSRVYAECIKSQAIRLLGRSARTTSSILMDNSIGREVYHIVIKTTETIL*	hallmark_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0017	cloud	direct	high	359	0.997	GCA_003944115.1_00331
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	318369	318713	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	16334	16678	GCA_003944115_1_1_328	GCA_003944115_1_1_328	-	409812	.	Uniprot:J9FAZ3_9ZZZZ	type-I-neck-protein	MSLSYKVKGLDKFIRSAENKGRRASSAVDKELNRSSLRVERSAKKGAPWDTGWLSENIYSSKASRLGYKVISPAEYSVYVELGTRKMTAQPFMEPALKEEHPKLMNNLNKMFRK*	hallmark_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0018	cloud	direct	high	344	0.997	GCA_003944115.1_00332
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	318710	318988	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	16675	16953	GCA_003944115_1_1_329	GCA_003944115_1_1_329	-	409812	.	PDB:5A21_F	head-closure-knob	MIYNDRVILIEETAPKDELEDDVTTEQIGPLPCQRGTLTNNEQMGIFGKYNLDGFKLHLQGIHQDFSEVIYNGKRRAIKGKKYHRNSTVIYL*	hallmark_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0019	cloud	direct	high	278	0.996	GCA_003944115.1_00333
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	319003	319362	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	16968	17327	GCA_003944115_1_1_330	GCA_003944115_1_1_330	-	409812	.	PFAM:PF05135.12	head-tail-adaptor	MTAIDTNEILKEIKLLKGVSDTAQDDLLNLTIKESVERILAFVNRYSETSITEIPNNAAYIVRDVAVKRFNKLNSEGAKADSEEGRAFTWEDSYLSEDDKQTLISLASKRKARGIARFI*	phrogs_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0020	cloud	direct	high	359	0.997	GCA_003944115.1_00334
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	319366	320250	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	17331	18215	GCA_003944115_1_1_331	GCA_003944115_1_1_331	-	409812	.	PDB:6B23_B	Major-Capsid-Protein	MAEQKLTTMANLGEIKSIDFVNKFSKNINDLLTLLGVSRRQELTSDLKIQTYKWTTDVNATNPGEGEDIPLSQMVRAKADAYEVAWFKKRRSVSAEAIARHGASVAITEADTRLMREIQNGIKEQFFTFLKANPTKNKGKGLQGALAQAWAKIATFNEFEGSPIVTFVNPVDAAEYLGNAGVGADASNVFGMTLLKNFLGMQNVIVMNGVPEGKIYTTAIENLVFANLNVSSGDLGGLFADFTDETGLIAVARDRALKNLTYESVFFGANVLFAEIPQGVVETSIEKPAVLPGG*	hallmark_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0021	cloud	direct	high	884	0.999	GCA_003944115.1_00335
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	320254	320856	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	18219	18821	GCA_003944115_1_1_332	GCA_003944115_1_1_332	-	409812	.	PDB:6B0X_d	Major-Capsid-Protein	MSEEINGTTTTVDQTETVDTQNEKAVDVESNADSEKHGRIFTRAEVGKMLAAERAKWEAEQVTALEQAKSEGERLAKLTKDERAREEEAKRIAELEKREQVIAEREMKLATQSLLADEGLPQEFLEHVLAPTAEEVKAKITALRDVFDSEVEKRVNERLVQSAPRRGTTTGITKEQIMAIEDTDKRQAAIAENINLFRKG*	hallmark_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0022	cloud	direct	high	602	0.998	GCA_003944115.1_00336
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	320990	321202	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	18955	19167	GCA_003944115_1_1_333	GCA_003944115_1_1_333	-	409812	.	.	hypothetical protein	MEPWKERFKKEYHELRERFQKLDMMIDKYEKGQLEFEPKCPIDLLKGQRSTMWNYLKILEQRAEIEEIKL*	.	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0023	cloud	direct	high	212	0.995	GCA_003944115.1_00337
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	321322	321537	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	19287	19502	GCA_003944115_1_1_334	GCA_003944115_1_1_334	-	409812	.	.	hypothetical protein	MNKRIKKKRELYDRLKKLEGAVDYLLDQNNQLWNIVDRLEKISSQNVKATNSRFDEIEKDIHGLKKPRKKS*	.	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0024	cloud	direct	high	215	0.995	GCA_003944115.1_00338
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	321692	323092	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	19657	21057	GCA_003944115_1_1_335	GCA_003944115_1_1_335	-	409812	.	PFAM:PF06152.10	minor-capsid-protein	MNKKLNQNHLDYWSGRSDEIFRYLDRKDIDFFGELNKVYQEQANEMQKAFYDFVSKYSENGSMSYQEALQRLKGTDLSDYRENAKKYREQAEKDPELLKRLNEQYASARATRLDALQIDMFFRAGVARGLIAEKFESYLQKMAVMSYKKAMSGRVGSINEPALKELVKTPFNGYNYSQQLWGNTNNLVKDLKKVLKTGFVRGEHPRTMARDLAQKYKVANSRAETLVRTDGTMIVNRSAIQRYKDAGLKYYRILVHLDNRTTEICKRIHAEDKRYLIDEMQAGVNAPPFHFNCRSGVIPDEEELNSDIKAYDHDFEKLRDDLADLWDDISKGNLPYKSIERSLAESYTIGQLPNVKGTEELLKYVQVTGKSLAKILEKHGTEFPLKQMLLLQELVTDPDYAADNSSHHNNSILLYKKVPERLKYLMEAALIQKDDGSYIIHYHKIKKQKLNKLKREQKILYSKDDM*	hallmark_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0025	cloud	direct	high	1400	0.999	GCA_003944115.1_00340
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	323061	324590	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	21026	22555	GCA_003944115_1_1_336	GCA_003944115_1_1_336	-	409812	.	PDB:5A20_A	Portal-Protein	MEVKFLNGTRFYSRSNEHFMMMTEDFEVIEYGSDNWIEQLKRYVNRHKAEQQPRLKELKRYYKGDNNIKYRPAKTDETAADNRISSDFAKYITIFEQGYMLGNPVEYKNENETILDNIKDFSAKNNEKKHNSSIKKDLCVYGRAYELLTVTNRDGKAWVKLYKLNPEQTFVIYDDTYEQNSLMAVNYYDVDYGDSKRKTIIKVYTADHIYSYEWKSTDSDKMALKDEQEHYFKAVPVNEYSNNEERLGSYESVLDNIDAYDLSQSELANFQQNSNDAILMIKGNPYTGAEENDFLEDGRINPNGRLYVSQAYKKAQVLILDDNPNPGGANPDAGYLIKSYDSEGAEAYKKRLVNDILRFTFTPDTLDNNFAGTQSGESMKYKLMASDNYREQQEDLFEAGLMRRLRLAVNIWTIQGNENTAYELINETSVVFSPNVPQNEKEIVEMIKSLYGIVSDQTIFELLNQVTGVDAEDELRRLKEQEDLEQPEPRLNPVDEVVDDEQEAESKPS*	hallmark_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0026	cloud	direct	high	1529	0.999	GCA_003944115.1_00341
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	324593	325900	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	22558	23865	GCA_003944115_1_1_337	GCA_003944115_1_1_337	-	409812	.	CDD:COG1783	Large-Terminase	MNQTYQIKPSDIIVDLPKTVGSGYGQFWRSRNFYRVVKGSRGSKKSKTTALNFITRILKYPWSNLLVVRRYSNTNKQSTYTDFKWAANQLKVAHKFKFNESLPEITVKETGQKILFRGLDDELKITSITVDVGILCWAWFEEAYQIESEDKFSTVVESIRGSLDAPDFFKQITVTFNPWNERHWLKRVFFDKETQRADTLSLTTTYRCNEWLDDVDIKRYEDLYQTNPRRARIVCDGEWGVAEGLVFENYSVRDFDIQDAIKRVGETAAGLDFGFTHDPTTFPRLAVDLDKKELWIYAEHYEHAMTTEDIYQMIAKNDMLNAEITADSAEQRLIAELRSKGVRRIQASVKGKGSINAGIDFMKQFKIYIHPSCEKTIEEFDTYIYKQDKDGNWLNEPIDANNHVIDAIRYALEKYHIERKSTQDRMKNASYYFRR*	hallmark_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0027	cloud	direct	high	1307	0.999	GCA_003944115.1_00342
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	326434	326856	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	24399	24821	GCA_003944115_1_1_338	GCA_003944115_1_1_338	-	409812	.	PFAM:PF05263.10	transcriptional-regulator	MSIDIRQRLKALQYIDIKAKSKHQEIISLKSGILRSQQYTDQPKSGSPGNRSEELNVLIIDKSEKLYQEIQEMYAERDELIRVIESLQDPIENLIMRLYYINGHSIKEIEKELPLSRRSIFYAKESAEKKILAHFAPNGT*	phrogs_hmm	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0028	cloud	direct	high	422	0.998	GCA_003944115.1_00343
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	326847	327041	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	24812	25006	GCA_003944115_1_1_339	GCA_003944115_1_1_339	-	409812	.	.	hypothetical protein	MSEDKIEQLEHAKKCYLRDLEPEHTAVVQRDFGLQVASKRRDWLKKQVKRCDEEIKFLEERRCQ*	.	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0029	shell	direct	high	194	0.995	GCA_003944115.1_00344
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	327028	327270	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	24993	25235	GCA_003944115_1_1_340	GCA_003944115_1_1_340	-	409812	.	PFAM:PF10828.7	Rz-like-spanin	MNSDKFLNKFTYFILCVFIAVVCFGFYKQSEANQNLNDKVFRLERQNAEITKQVDKLNKTIDAEIAKNLKEVAERNNVGG*	phrogs_hmm	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0030	shell	direct	high	242	0.996	GCA_003944115.1_00345
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	327272	327493	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	25237	25458	GCA_003944115_1_1_341	GCA_003944115_1_1_341	-	409812	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MTEIKLIFFIASCVVSFYAGAVFNRPVVTHKEEINGRYHVTVRHYGKYLVNKYQYESISVGDDMPDYLKRKEN*	mmseqs_cdd	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0031	cloud	direct	high	221	0.995	GCA_003944115.1_00346
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	327480	327677	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	25445	25642	GCA_003944115_1_1_342	GCA_003944115_1_1_342	-	409812	.	.	hypothetical protein	MIDNEGLKREKELIIAISNLKIEIIKKSDGLSNQSLINIKRQARELYECLVCLQYDAKEAGHDRN*	.	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0032	cloud	direct	high	197	0.995	GCA_003944115.1_00347
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	327689	327898	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	25654	25863	GCA_003944115_1_1_343	GCA_003944115_1_1_343	-	409812	.	cd10511	Zn-ribbon_TFS	MAIDFQIIQTPEWILYNCPKCGEEHEWHYEDFLKYYGLNSDELWDNSTTIEVECQDCGFNFTLSGYEID*	hhsuite_tools	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0033	cloud	direct	high	209	0.995	GCA_003944115.1_00348
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	327898	328398	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	25863	26363	GCA_003944115_1_1_344	GCA_003944115_1_1_344	-	409812	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MKKKELVKTLMERMQKFGYFPSFTNVKIFIREYEKLTKSEPQKPVVPQFVAEIIEYYKRNNATLYDALREKNFNKQYSEWLLNEQNAYDKVAKAWLDGYEVEKEKRYTVKITKTKQYLYSRDNDFSFISYVRPDDNPHNCHTRKELEEANFGWVFDCLGIEIEEVE*	mmseqs_cdd	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0034	cloud	direct	high	500	0.998	GCA_003944115.1_00349
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	328376	328696	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	26341	26661	GCA_003944115_1_1_345	GCA_003944115_1_1_345	-	409812	.	PFAM:PF11753.7	nucelotide-kinase	MGLFTELDWSRIKMEEINAENLLKTKEDKVNNPNHYRGAFGLEAIEVVRNFAGDLSAVQGFYWGNAIKYLLRFQSKNGLEDLKKARKNLDWLIEEMEKGNEEKRIG*	common_virus_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0035	cloud	direct	moderate	282	0.879	GCA_003944115.1_00350
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	328680	329183	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	26645	27148	GCA_003944115_1_1_346	GCA_003944115_1_1_346	-	409812	.	PFAM:PF03819.16	MazG-like-pyrophosphatase	MKLQKLITKVQQWSIDRGLDKADSKKQMLKLYEEFGELASGLAKGNKEVVKDSIGDVVVVLIILAQQQGLEKISDFNIICNHLQESDLMPQASETIGLISLRVRRTKSKVEEPIVRLISYLRTIAKYENLKFEDCLSQAWNEIKDRKGKLIDGVWVKEEDLADGVIH*	phrogs_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0036	cloud	direct	high	503	0.998	GCA_003944115.1_00351
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	329185	329571	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	27150	27536	GCA_003944115_1_1_347	GCA_003944115_1_1_347	-	409812	.	.	hypothetical protein	MGNVERFYSIIEEKQSEYKNVFEFLRTFISNEKEMSYTASRIRIDKKGGRLPPVNTMVRLAPLFDKTFFETCLREKMDSANIRDRDVEIGQKYLLKIDSTQNTTEEERLRKLKRKLKREMHLEKSWGI*	.	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0037	shell	direct	high	386	0.997	GCA_003944115.1_00352
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	329559	329966	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	27524	27931	GCA_003944115_1_1_348	GCA_003944115_1_1_348	-	409812	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MKEPIILNFELNRKQMISANDRLHFQKKAKITKFLRELAKYEGLNTLKDYFGLPFSEDKPCFVQVLIFSPTARIYDPPNWSPTSKALLDGLTDAGFWTDDNYNIIKHTIFSHGGKSGTKNYKIKLFIREVREWEM*	common_virus_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0038	cloud	direct	high	407	0.998	GCA_003944115.1_00353
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	329963	331195	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	27928	29160	GCA_003944115_1_1_349	GCA_003944115_1_1_349	-	409812	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MKFLDLFAGIGGFRLGMESAGHKCIGFCEIDKFARASYKAIHDTKGEIELHDITAVSDEFIRGIGRVDIICGGFPCQAFSIAGNRRGFEDTRGTLFFEIARFASILKPRYLFLENVKGLLNHDGGATFETIISTLDELGYNVEWQVLNSKNFGVPQNRERVFIIGHLRRERTRRIFPLIGENQSTSSQSVVKIGNVNPSGNGMNGDVYQAAGLAPTLTTNKGEGQKIAIKSNTIKQFGILQPNFNQCGVVYETDGIAPTIRAYQGGGLEPKIIQRGHGYNQGREHDIAPTLTSNSYHENNILRIKEATTQGYAEAEIGDSVNLSHPNSKTRRGRVGKQVANTLLTGESQGVVESNFRIRKLTPRECWRLQGFPDWAFDKAQEVNSNSQLYKQAGNSVTVNVIAAIAKELK*	common_virus_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0039	cloud	direct	high	1232	0.999	GCA_003944115.1_00354
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	331204	331623	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	29169	29588	GCA_003944115_1_1_350	GCA_003944115_1_1_350	-	409812	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MINNVTLVGRMTRDAELRYTPQNQAVATFTLAVNRNFKNTNGDREADFINCVIWRQQAENLANWAKKGALIGITGRIQTRSYENQQGQRVYVTEVVAEQFQLLESQKERSNQGQSQGYSQAPDFGRSEPMDISDDDLPF*	common_virus_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0040	cloud	direct	high	419	0.998	GCA_003944115.1_00355
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	331620	332279	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	29585	30244	GCA_003944115_1_1_351	GCA_003944115_1_1_351	-	409812	.	pfam04404	ERF superfamily. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to ERF.	MAENKMTIYEKLANIQNELKAPKNQYNSFGKYNYRNAEDIEEALKPICLKYRATCLISDVTTEELSNELVTKVSVVLLDWDSESIIKVTGRAREERTKKGMDASQVSGGAQSYATKYALSQMFLIDDSKDADTDADYIQSGRAEKKPSSKKQAEQVISSNQASAYNKEINQIAEEKGKTDGTITAWFLQHLGVASYKQIKQSQVEQADALIQKLKGNNS*	mmseqs_cdd	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0041	cloud	direct	high	659	0.998	GCA_003944115.1_00356
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	332289	332762	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	30254	30727	GCA_003944115_1_1_352	GCA_003944115_1_1_352	-	409812	.	PFAM:PF05565.10	resistance-protein	MATLYELTGQFLDIYNMDLDDETKLDTLESIDWNEDYENKVENYIKVMKNLEADIKARKTELDRLKKLNDADKKKIERMKNDLTASMELTGHDKIDTTLFKVSFRRSKSVEVDMVLLPDQYKKIEYKADKAGLKQLLTNGEEIAGAELVEKKNLSIR*	common_virus_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0042	cloud	direct	high	473	0.998	GCA_003944115.1_00357
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	332779	332904	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	30744	30869	GCA_003944115_1_1_353	GCA_003944115_1_1_353	-	409812	.	.	hypothetical protein	MLEPFDYDRWLSTPPEPYRGPEEDEDEAYESWIDRQLCEMD*	.	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0043	shell	ambiguous	low	7	0.056	GCA_003944115.1_00358
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	332897	333229	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	30862	31194	GCA_003944115_1_1_354	GCA_003944115_1_1_354	-	409812	.	3KE2_A	uncharacterized protein YP_928783.1	MDKLHKRILQVIPVGSERPRPRREIEQMLGMSKRSVEKAIERLVFQYGIPVVAIKQAGHNGYYLPRSEEERQEGLQAYKSQIKTSQMRVSKVESVDLTKFHEELKEALHA*	hhsuite_tools	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0044	shell	direct	high	332	0.997	GCA_003944115.1_00358
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	333222	333365	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	31187	31330	GCA_003944115_1_1_355	GCA_003944115_1_1_355	-	409812	.	.	hypothetical protein	MIDDFEWMFYPLSDVMKEKLLASDPVASEMKIKDLMLCALLREVEHG*	.	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0045	shell	direct	high	143	0.993	GCA_003944115.1_00359
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	333398	334213	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	31363	32178	GCA_003944115_1_1_356	GCA_003944115_1_1_356	-	409812	.	PDB:4M4W_K	Replicative-helicase	MIEKIGFEPLHYVNEEEICPKHSCYMWTLKKPVRVINRTEPYQPTFCPQCVREKVEREQEAEIGEAYTSSILRNTFDVLDKNSLIPNDLKEASFKTFTVSNEADNLARNFALRVAKHYFKDGKGNTVIVGEAGRGKTHLAIAIARKINADFKAINTPKSVLFMNVPAMFQKIQSGFGRRDVRSADDWLELLKRVDYLVLDDFGKGDQAQWKKDFMYTLLDARDKTIITSNLSGAEMKKIFDASLVSRVAKGSKDLSFKYPQDSEDRRTLPF*	rep_hall_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0046	cloud	direct	high	815	0.999	GCA_003944115.1_00360
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	334223	335059	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	32188	33024	GCA_003944115_1_1_357	GCA_003944115_1_1_357	-	409812	.	PFAM:PF09681.9	replisome-organiser	MAQRRMISKEIIQSQRFLTLPLEAQALYFHLIAASDDDGVVDAFPIVRMVGAREDNLGLLVVKKFVLPLNNEMIYFITDFSKQNKIRQDRIQPSIYRDLLLEKTDLVRDGKRLVDKNEIFDGQMPDKCLTNDRQMADVCQTSDGQMSAQYSIGKYSIGEYSLEQLSTEKESVVDDKKPKQKSLSQIIKESNIKLNDRQAQMLLDYVGLDNMTIEMIQYAVELTEDAGANNFNYLNKILKSWREKKLTTLDAVKKDVEEFEIRKSNPSVFKPYRDELPF*	rep_hall_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0047	cloud	direct	high	836	0.999	GCA_003944115.1_00361
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	335059	335229	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	33024	33194	GCA_003944115_1_1_358	GCA_003944115_1_1_358	-	409812	.	.	hypothetical protein	MVIFERKPYNPKSREAELLDRIEQLEREKSDLETVIRKNKHEILWLQGIAKYRKES*	.	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0048	shell	direct	high	170	0.994	GCA_003944115.1_00362
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	335189	335497	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	33154	33462	GCA_003944115_1_1_359	GCA_003944115_1_1_359	-	409812	.	.	hypothetical protein	MTEPPILSQIAGATLWLASLFLIMLISSIKEEIERRRIEKRNRELETQNRELLMREAEYRAQQIARQEAEYAYYKHKKNFSTEGIEVPFNGDIRAQAVQSEE*	.	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0049	shell	direct	high	308	0.997	GCA_003944115.1_00363
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	335490	336146	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	33455	34111	GCA_003944115_1_1_360	GCA_003944115_1_1_360	-	409812	.	2PIG_B	Putative transferase	MNKKFELLLDDTITIFGIKLFRIKALISFGNVEEGELGGYIEKEANLSFYGNAWVSGNAEVYGNAEVYGNARVSGNAEVYGDARVSGNAEVYGNAEVYGNARVSGNAEVYGDARVSGNAEVYGNAEVYGNAWVSGNAEVYGDARVSGNADYIVFKNHWSSGRYFTYTKSNKMWRVGCFYGTGQELIKKAYQDSEVSGKHYEAYVEFVDKLEKLEEAND*	hhsuite_tools	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0050	cloud	direct	high	656	0.998	GCA_003944115.1_00364
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	336216	336527	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	34181	34492	GCA_003944115_1_1_361	GCA_003944115_1_1_361	-	409812	.	PFAM:PF00292.17	excisionase	MPKAELVYRPANQSEKAVAGDYEHLCQIWEGLTPGTAKQFAKEMRENPEFEQYVFNPTHKLVFIDYEGFRKFWKWKQLNRYRSKKISLAEMESDKALAKRLGF*	phrogs_hmm	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0051	cloud	direct	high	311	0.997	GCA_003944115.1_00365
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	336631	336774	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	34596	34739	GCA_003944115_1_1_362	GCA_003944115_1_1_362	-	409812	.	.	hypothetical protein	MVHIEIENLSDFIESAEEVVKKAEELEAAVQRLNEMELELKTKTTNK*	.	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0052	cloud	direct	high	143	0.993	GCA_003944115.1_00366
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	336846	336971	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	34811	34936	GCA_003944115_1_1_363	GCA_003944115_1_1_363	-	409812	.	.	hypothetical protein	MKPERYPYSGKRKNLERQAVNSSVTFSGSKIVIKSQSITGV*	.	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0053	cloud	direct	high	125	0.992	GCA_003944115.1_00367
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	336993	337175	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	34958	35140	GCA_003944115_1_1_364	GCA_003944115_1_1_364	-	409812	.	.	hypothetical protein	MKVEGITTIDSEINFGECHIYEAPERIKKLFPNQNLVKATEKGKSYILNADYIVLLFTKI*	.	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0054	shell	direct	high	182	0.995	GCA_003944115.1_00368
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	337225	337425	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	35190	35390	GCA_003944115_1_1_365	GCA_003944115_1_1_365	-	409812	.	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain  [Transcription]. 	MGEPKVTIAELRAKHNKMRQSDLAKAVGVTTQTIGAWEKDITAIRGEHLLKLCKVLDTTASDLLGA*	mmseqs_cdd	nonviral_gene	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0055	cloud	direct	high	200	0.995	GCA_003944115.1_00369
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	337616	337969	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	35581	35934	GCA_003944115_1_1_366	GCA_003944115_1_1_366	+	409812	.	PDB:1PRA_A	Repressor-protein	MVKKETHPEIGERIRNLRELKNIDQMSLAEMLGYKSQSTISKWESGTNLPTGKKLMELAKILGVSTNEILGMSDEPYTETDLRKMAENAKTFDGKPLNEEDIQAIQNIIEIYLKGRL*	common_virus_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0056	cloud	direct	high	353	0.997	GCA_003944115.1_00370
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	337966	338343	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	35931	36308	GCA_003944115_1_1_367	GCA_003944115_1_1_367	+	409812	.	PDB:3DTE_A	IrrE-protein	MTIEEICDKHGVQIAYFDKELWHRHGVYIDEIKIVFVNKALSSDAKKRVVLHELGHLNHSGMEYAINPIKCENEANRSMIHALLEEELKGIEKEDFNYLSFMERHKLKTTTDELMVIDEFYRLVG*	common_virus_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0057	shell	direct	high	377	0.997	GCA_003944115.1_00371
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	338348	338893	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	36313	36858	GCA_003944115_1_1_368	GCA_003944115_1_1_368	+	409812	.	.	hypothetical protein	MDFNKLKGLAKTAVNKTAEGISKVNEIRKKASLETKITLPAPNQFASSTTVRKTIDGQYYIGMYSEEPVLYDFENFNFSGSTIIERTTTTGKTKQRGKKTSTIAGAALGTVLAPGIGTVVGGMVGASGKKKGTINSTSVTTQEEKPGSASILLRNIATGEIKIISTKLTQAQANNVERFFE*	.	hypothetical_protein	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0058	cloud	direct	high	545	0.998	GCA_003944115.1_00372
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	339014	340156	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	36979	38121	GCA_003944115_1_1_369	GCA_003944115_1_1_369	+	409812	.	PDB:1Z19_B	Integrase	MWIEQHKSGKVNFIERYKNPYTDKLARVSVLMEKNTPRIRKEAQKQLEIKIANILNELEASEMLFTELFDQWWSFYKQEIKRSSIASLSGNIKEIKDGFGIGIKVSKIDPKYVQNYLDNLDCSRNKKERNKSMLNLAFDYAIDLGIIKDNPARRAKLPRIQKTLEDWKKVSQKYLEEDEIKLLLKELYRRPSTYRIGLLSEFMSLNGCRIGEAVGIEPHNIDYESNILQIHGTYDHTNGYRKGEKTSPKTLASYRETVMTIREKEILEEMEFMNELEKNTNLRYKDMGFIFTTRNGVPIQTNSFNLALKKANERLETPIQKNLTSHIFRHTLVSRLAENNVPLKAIMDRVGHSDAKTTTQIYTHITKQMKSTVADVMEKY*	common_virus_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0059	cloud	direct	high	1142	0.999	GCA_003944115.1_00373
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	340244	340519	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	38209	38484	GCA_003944115_1_1_370	GCA_003944115_1_1_370	-	409812	.	PDB:1MUL_A	DNA-binding-protein	MANKQDLIAKVAAATELTKKDSAAAVDAVFAAVTEYLSKGEKVQLIGFGNFEVRERAARKGRNPQTGKEIKIAASKVPAFKAGKALKDAVK*	common_virus_hmm	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0060	persistent	direct	high	275	0.996	GCA_003944115.1_00374
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	340664	341497	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	38629	39462	GCA_003944115_1_1_371	GCA_003944115_1_1_371	-	409812	.	TIGR00762	EDD domain protein, DegV family. This family of proteins is related to DegV of Bacillus subtilis and includes paralogous sets in several species (B. subtilis, Deinococcus radiodurans, Mycoplasma pneumoniae) that are closer in percent identity to each than to most homologs from other species. This suggests both recent paralogy and diversity of function. DegV itself is encoded immediately downstream of DegU, a transcriptional regulator of degradation, but is itself uncharacterized. Crystallography suggested a lipid-binding site, while comparison of the crystal structure to dihydroxyacetone kinase and to a mannose transporter EIIA domain suggests a conserved domain, EDD, with phosphotransferase activity. [Unknown function, General]	MAKIKIVTDSSVTIEPEVVKDLDITIVPLSVMVDGVVYSDSDLKEGEFLRLMKESKNLPKTSQPPVGVFAEVFETLAETADHIIAIHMSHALSGTIEAARQGATLANADVTIIDSSFTDQALKFQVVEAAKLAKAGADLDDILQRIEEVKEKSELYIGVSTLENLVKGGRIGRVTGLISSLLNIRVVMQMKNHQLQTIVKGRGDKTFKKWLNELEDKLTNADIEEIGISYAGTPAYATEMKERLQKFVEKSISVLETGSIIQTHTGENAWAILIRYR*	mmseqs_cdd	nonviral_gene	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0061	persistent	direct	high	833	0.999	GCA_003944115.1_00375
GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote	cenote	CDS	341561	342289	GCA_003944115.1	RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115.1_RJPD01000001.1	GCA_003944115.1|RJPD01000001.1	GCA_003944115_1_1	GCA_003944115_1_1@C24	39526	40254	GCA_003944115_1_1_372	GCA_003944115_1_1_372	-	409812	.	cd00144	phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine.  This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-).  The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes.  Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes.  PPPs belong to the metallophosphatase (MPP) superfamily.  MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases).  The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets.  This domain is thought to allow for productive metal coordination.	MTDYFVIGDVHGKYDMLNDLLQKWDSHSQLVFLGDLIDRGENSRAVLEKVRDLVNQQGAICLSGNHEFMFLTWLDNPAKSYDHYHRNGGDTTINSILGRPLDAPVDAVLDAQAVLEKAPDLVEFIRKMPFVLETDKYIFVHAGIELDLDDWHDTSDYQKVWIRAPFHEGDNRTGKTIVFGHTPTFYLFNEKPGISQLWQTSDGKIGMDGGAVYGGVLHGLLLDDSGIKEHHFIRNDQCSSEG*	mmseqs_cdd	common_virus	C24	40254	302036	342290	GCA_003944115.1|RJPD01000001.1@region_302037_342290@tool_cenote_CDS_0062	persistent	direct	high	728	0.999	GCA_003944115.1_00376