core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	2	1342	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	3	1343	GCA_003944155_1_9_1	GCA_003944155_1_9_1	+	82553	.	COG3583	Uncharacterized conserved protein YabE, contains G5 and tandem DUF348 domains [Function unknown]. 	PAVDEVVEVGTKKAPVVTTKEETKTEEVDFQVKEVPNPALPEGVRNVTTPGKKGVRTIVETVTYTDGKETGRVVKSNEITTPAVDEVVEVGTKKGVVTTTEEVVEKEVIKHGSSTVQNPALPKGTRNVKVQGVDGEKEVTYTVTKADGQEVSKVKKSETVTKPAVDEVIEEGTGPVITTKEETKTEEVDFQVKEVPNPALPEGVRNVTTSGKKGVRTIVYTVTYADGVETGRVEKSNTITTPAVDEVVEVGTKKATAPVVTTENVTETQVIYHGTITLSNPDLPKGTKRIKIAGVDGEKTVVYTITKTNGVETSRVVRDEQITKTPITQVVEIGTKESGSSQSNASQDQKDPSDKAQDSKGQGQKDSTGKVQDPKDQAKPGSDAATSSQSGQTDRPQQPQYSRVNRNAEEKKNLPNTGEHANGLVALLGLVLASVTAFFNFRRKKH*	mmseqs_cdd	nonviral_gene	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0001	persistent	direct	moderate	1121	0.836	GCA_003944155.1_02009
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	1641	2708	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	1642	2709	GCA_003944155_1_9_2	GCA_003944155_1_9_2	-	82553	.	PDB:1Z19_B	Integrase	MAYFRKRDNGWEYRISYKDSDGKYKQKSKSGFQTKKLAQAAAREVEANLSENILTDKDVSLYDFVKTWSEVYKRPHVKDKTWETYTKNLKHIKTYFGDLKVKDITPLYYQKRLNEFGEKYAQETLEKFHYQIKGALKVAVREQLISYNFAEDAKVKSQIETRSEDNDFLEESEYTALIASTRSNIQYVSYFTLYLLSVTGMRFSEALGLTWNDIDLQNGIIDINKSFDYSKTQDFAGLKNESSKRKIPIDRITIETLKAYRKKHWQANIKNRVCFGVSNSACNKLIKKLVGRPVRNHSLRHTYASYLILKGIDIVTISKLLGHESPDITLKVYSHQMEALADKNFEQIKEIFLTA*	common_virus_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0002	cloud	direct	high	1067	0.999	GCA_003944155.1_02010
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	2829	3365	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	2830	3366	GCA_003944155_1_9_3	GCA_003944155_1_9_3	-	82553	.	.	hypothetical protein	MKKITLVSIATLALFLGGCAQQESESKPSQEQVTSETTEETTEKSRQEKAQELVQKAKEKSKQENKGEEQLKKATGQVDLNSPILDQYANSVQQSTESVKMKVYYRSDAIVIQLPVALSDMTEEQLHQTVDGLLKIKNSVERAYKVTEKDFVSPPLYVFDKDEKRLAFEQNGAMTYDN*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0003	cloud	direct	high	536	0.998	GCA_003944155.1_02011
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	3416	3622	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	3417	3623	GCA_003944155_1_9_4	GCA_003944155_1_9_4	-	82553	.	.	hypothetical protein	MSTESRPMEVIKHNLDCKCHRRREWIKVNGKWCPIEFSVDDPNEPPMTEEEKANVALILQQHLPKESE*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0004	cloud	direct	high	206	0.995	GCA_003944155.1_02012
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	3624	4361	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	3625	4362	GCA_003944155_1_9_5	GCA_003944155_1_9_5	-	82553	.	PDB:2FJR_A	Repressor-protein-CI	MTEQELRELIELKYGSVRQMALKIDMPASTINSILNRGILKSNVDNIFKICSALGIRPETLADGVDFHKAETEAPEILMVYNQLEELRQEKVLGFANAQLDEQESSKVVSIFEKVSNEDYIIDYVEGLVAAGHGTFQEDNLHMEVRLRANDVPDEYDTIAKVAGDSMEPLIEDNDLLFIRVASQIDINSIGIFQINGKNFVKKLKRDYDGSWYLQSLNNSYEEIHLTENDDIRTIGEVVDIYREE*	common_virus_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0005	cloud	direct	high	737	0.999	GCA_003944155.1_02013
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	4545	4751	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	4546	4752	GCA_003944155_1_9_6	GCA_003944155_1_9_6	+	82553	.	PFAM:PF13744.5	transcriptional-repressor	MLNIDEARKEKGISIVDIADYLCVRSQTVSDKLRGKYPFTFQEAMLVQEKFFPEYELKYLFTPAGDTA*	phrogs_hmm	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0006	cloud	direct	high	206	0.995	GCA_003944155.1_02014
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	4818	5000	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	4819	5001	GCA_003944155_1_9_7	GCA_003944155_1_9_7	+	82553	.	.	hypothetical protein	MKVEGITTIDSEINFGECHIHDVPERIKKLFPNQNLVKVTEKGKSYILNADYIVLIFTKI*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0007	shell	direct	high	182	0.995	GCA_003944155.1_02015
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	5133	5651	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	5134	5652	GCA_003944155_1_9_8	GCA_003944155_1_9_8	-	82553	.	.	hypothetical protein	MISWILDNMDMLNIIAAWVGAVTGVIGLLYSVAMNRATVKISNCFKDRVDPKSDYQYNFELVNTSNVAVVIKSVQLFDINGKEIFDNGFDPSSVVPRYATDEYGLSRIPLPLLDSSWYSEPFEDETDLFPNSSVGFSYYLNKAPYKIKITTNKQIHFFSKSKSFTPIYKKCD*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0008	cloud	direct	high	518	0.998	GCA_003944155.1_02016
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	5703	6419	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	5704	6420	GCA_003944155_1_9_9	GCA_003944155_1_9_9	+	82553	.	PFAM:PF03374.13	KilA-protein	MNEVITVTLNDKHEPVVSGRQLHEALGVNSRYTTWFDRMKEYGFTEGQDFLPNLGKSTGGRQATDHIIKLDMAKEIAMIQRTERGKQVRQYFIQVEKDFNSPEKIMARALLMADQKVHKLEAQIEADRPKVLFADAVSASKSSCLIGELAKILKQNGIDIGQNKLFQWLRAHGYLISRRGESWNQPTQKSMKLGLFELKKTNINHPDGHTTVNTTTKVTGKGQQYFINKFLNQEYLMA*	common_virus_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0009	cloud	direct	high	716	0.999	GCA_003944155.1_02017
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	6432	6677	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	6433	6678	GCA_003944155_1_9_10	GCA_003944155_1_9_10	+	82553	.	.	hypothetical protein	MKPERYPYSQKRLSPSAERVNRYIKELETLKLDFSDRGLSEELWKKVKAIAENPATELKSYDLEFAPKELVARLRELQEYF*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0010	cloud	direct	high	245	0.996	GCA_003944155.1_02018
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	6604	6801	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	6605	6802	GCA_003944155_1_9_11	GCA_003944155_1_9_11	-	82553	.	.	hypothetical protein	MMSEEVYYSRNIEALTDRIIELVRDDNKMFEPVKVREVRRLVKSILATHEVELQALWAQTQDRNS*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0011	cloud	direct	high	197	0.995	GCA_003944155.1_02019
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	6903	7433	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	6904	7434	GCA_003944155_1_9_12	GCA_003944155_1_9_12	+	82553	.	PFAM:PF05551.10	homing-endonuclease	MDEVWKDIPFAKGYYQVSNLGRVRSIDRTANAKQSTRKIKGQVLQQSLSSGYAIVTLSFDGVRKSVRVHRLVAEAFLPNPINKRTVNHIDENKLNNRIENLEWATDRENANHGNRTKKSALGRCKPVEQLSLDGELVNSFDSIKLAAMATDISPQKISATAMGHQKQTHGYKWRYA*	common_virus_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0012	cloud	direct	high	530	0.998	GCA_003944155.1_02020
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	7433	7717	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	7434	7718	GCA_003944155_1_9_13	GCA_003944155_1_9_13	+	82553	.	PFAM:PF09035.9	Excisionase	MNDLMNQLLDQFEAGLMDRTLKIMTVVTDEKRRFPMELNKSQCSEMLLGTKDTGTFDERFNSHKDFPRIKGKREKYPRDAVIDWYHKNWERTAV*	common_virus_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0013	cloud	direct	high	284	0.996	GCA_003944155.1_02021
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	7757	8341	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	7758	8342	GCA_003944155_1_9_14	GCA_003944155_1_9_14	+	82553	.	2F9C_A	Hypothetical protein YDCK	MNKKFELLLDDTITIFGIKLFRIKALISFGGVEKGELGGYIEKEDNLSFYGNAWVSGDAWVYGNAGVYSNARVSGDARVYGNAEVYGNARVSGDAMVYGDARVYGDARVYGNAEVYGNARVSGDADYIVFKNHWSSGRYFTYTKSNKMWRVGCFYGTGQELIKKAYQDSEVSGKHYEAYVEFVEKLEKLEEAND*	hhsuite_tools	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0014	cloud	direct	high	584	0.998	GCA_003944155.1_02022
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	8334	8642	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	8335	8643	GCA_003944155_1_9_15	GCA_003944155_1_9_15	+	82553	.	.	hypothetical protein	MTEPPILSQIAGATLWLASLFLIMLFYSVKEEIERRRIEKRNRELEAQNRELLMREAEYRAEQIARQQAEYAYYRHKKNFSTEGIEVPFNGNIRAQAVQSED*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0015	shell	direct	high	308	0.997	GCA_003944155.1_02023
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	8602	8772	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	8603	8773	GCA_003944155_1_9_16	GCA_003944155_1_9_16	+	82553	.	.	hypothetical protein	MVIFERKPYNPRTREAELLDRIEQLEREKSDLEAIIRKNKHEILWLQGMLKHKKES*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0016	shell	direct	high	170	0.994	GCA_003944155.1_02024
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	8772	9572	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	8773	9573	GCA_003944155_1_9_17	GCA_003944155_1_9_17	+	82553	.	PFAM:PF09681.9	replisome-organiser	MAQRRMFSKKITETDNFLDMPLSSQALYFHLNMGADDEGFVDKAKTIQRTIGASSDDLRILIAKGFVIPFDSGVVVIRHWRIHNYIRSDRFQSTMYQEEKKKIDFDETKTANIKPFHDVIPDVIPDGYQMDTQVRIGKDRLDKDRLELDKVNNLNYTGVENEKKSFSQIIKESNIKLNDRQAQMLLDYVGLDNMTIEMIQYAVELTEDAGANNFNYLNKILKSWREKKLTSLEAVKKDVEEFEIRKSNPSADNPAVFKPYRDELPF*	rep_hall_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0017	cloud	direct	high	800	0.999	GCA_003944155.1_02025
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	9582	10397	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	9583	10398	GCA_003944155_1_9_18	GCA_003944155_1_9_18	+	82553	.	PDB:4M4W_K	Replicative-helicase	MIEKIGFEPLHYVNEDEICPKHSCYMWTFKKPVRATNRTGPYQPTFCPQCVREKVEREQEAEIGEAYTSSILRNTFDVLDKNSLIPNDLKEASFKTFTVSTEADNLAKNFALRVAKHYFKDGKGNTVIVGEAGRGKTHLAIAIARKINADFKAINTPKSVLFMNVPAMFQKIQSGFGRRDVRSADDWLELLKRVDYLVLDDFGKGDQAQWKKDFMYTLLDARDKTIITSNLSGAEMKKIFDASLVSRVAKGSKDLSFKYPQDSEDRRTLPF*	rep_hall_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0018	cloud	direct	high	815	0.999	GCA_003944155.1_02026
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	10566	10898	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	10567	10899	GCA_003944155_1_9_19	GCA_003944155_1_9_19	+	82553	.	3KE2_A	uncharacterized protein YP_928783.1	MDKLHKRILQVIPIGSERPRPRREIEQMLGMSKRSVEKAIERLVFQYGIPVVAIKQAGHNGYYLPRSEEERQEGLQAYKSQIKTSQMRVSKVEAVDLDKFHEELKEALHA*	hhsuite_tools	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0019	shell	direct	high	332	0.997	GCA_003944155.1_02028
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	10891	11016	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	10892	11017	GCA_003944155_1_9_20	GCA_003944155_1_9_20	+	82553	.	.	hypothetical protein	MLEPFDYDRWLSTPPEPYTESEEDEDEAYESWIDRQLCEMD*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0020	cloud	direct	high	125	0.992	GCA_003944155.1_02029
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	11032	11856	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	11033	11857	GCA_003944155_1_9_21	GCA_003944155_1_9_21	+	82553	.	PFAM:PF03837.13	RecT-protein	MTNNQLSTVTHKDFFNSPAVKAKFQEVLKGKENEFVASLLSIVTNNKLFARASNQSIMTAAMKAAVLNLPIEPSLGQAYIVPYGQEAQFQLGYKGLLQLAQRSGKYKSITAGIVYKSQFISYNPLFEELEIDFTQPQDEVVGYFASFKLINGFEKLTYWTKEQAEAHGKRFSKTYSKGPWSSDFDAMAQKTLLKQIISKYGPLSVEMEQAFTADNESEDIKGAPIDVTPQEENLSDFLGEPTETELPKHDKVTGEVLEEVSFFEGNTTNIAEGV*	common_virus_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0021	cloud	direct	high	824	0.999	GCA_003944155.1_02030
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	11969	12805	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	11970	12806	GCA_003944155_1_9_22	GCA_003944155_1_9_22	+	82553	.	PDB:3L0A_A	Putative-exonuclease	MKAKELTDENYYSDKNWLSNSRFKEYQKCQARAYAVDNGLCIEDRDETPLLLGNYVHSYFESKEAHDNFLKENREKLLAKSGKNKGGLKSEFVIGDKMIQSLAEDEGFNRLYHGISGDEVKKEMIVYGEIEGVPVKGKLDSVNLSRGYFVDLKTMKSIYTEEWNADLKKRVPVSVNNILGFGYHGQLGLYRELLKQMTDKDFRPLIVAVSKENVPDKEIIKIDEEWLEEGLQNIKDNIAEIWNVIQGKQKPTNCGRCDYCRSQKKLGALVNLNDLIEF*	common_virus_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0022	cloud	direct	high	836	0.999	GCA_003944155.1_02031
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	12946	13353	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	12947	13354	GCA_003944155_1_9_23	GCA_003944155_1_9_23	+	82553	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MKEPIILEFELNRKQMISANDRMHFQKKAKITKFLRELAKYEGLNTLKDYFGLPFSEEKQCFVQVLIFSPTERIYDPPNWSPTSKALLDGLTDAGFWTDDNYNIIKHTIFSHGGKSGTKNYKIKLLIREVREWKM*	common_virus_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0023	cloud	direct	high	407	0.998	GCA_003944155.1_02032
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	13341	13724	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	13342	13725	GCA_003944155_1_9_24	GCA_003944155_1_9_24	+	82553	.	.	hypothetical protein	MENVEKFYSIIEEKQSDYKNVFDFLRTFISSEKEVSYIGSRLRIDKKWGRLPPVNTMIRLAPIFDKAFFETCLREKLDSAKRDRDAEAGQKYLLKIDSTQNTTEEERLRKLKRKLKREMHLEKSWGI*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0024	shell	direct	high	383	0.997	GCA_003944155.1_02033
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	13726	13992	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	13727	13993	GCA_003944155_1_9_25	GCA_003944155_1_9_25	+	82553	.	PFAM:PF11753.7	nucelotide-kinase	MKEKSYEQVLDEIIEEDKVNNPSHYKGKFGLEAIDVVRNFAGNLTAVQGFYWGNAIKYLLRFQGKNGLEDLKKARKNLDWLIEEMENE*	common_virus_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0025	shell	direct	high	266	0.996	GCA_003944155.1_02034
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	13985	14347	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	13986	14348	GCA_003944155_1_9_26	GCA_003944155_1_9_26	+	82553	.	.	hypothetical protein	MSKIVNVQIDETFFGREEHGILTCYLYLKGNGFGVGLGGRALDGYDKSKKKRVATQEGFELIDRIMTVVGVKKWEDLVGEYVRIEVPEAGFGSKITKVGNLIKDDWLDFEKFFDERGDGK*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0026	cloud	direct	high	362	0.997	GCA_003944155.1_02035
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	14344	14880	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	14345	14881	GCA_003944155_1_9_27	GCA_003944155_1_9_27	+	82553	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MNKQELIEYCESLKGGLNKFINGIDVDKIIAKIKQLDEPEKPVIPQFVADWIEYCKFTHVDLQHALIVGDVYFYNYANQKDFSKLKEFLDTENNQETFTRAWLDGYTVEEEAKYKVEFKGISGNINCLNHNSKIQKWYLASNYETDIVRTKFTRKELEEAGFGEVFNSPLFEVEEVQE*	mmseqs_cdd	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0027	cloud	direct	high	536	0.998	GCA_003944155.1_02036
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	14877	15041	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	14878	15042	GCA_003944155_1_9_28	GCA_003944155_1_9_28	+	82553	.	.	hypothetical protein	MKNKNNSEIWVKGYLDENGDIIISLGDDGYHRVLRDYVDSGLIECKKIEIEEVV*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0028	cloud	direct	high	164	0.994	GCA_003944155.1_02037
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	15041	15178	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	15042	15179	GCA_003944155_1_9_29	GCA_003944155_1_9_29	+	82553	.	.	hypothetical protein	MEEIIMAFLPNEELNRLIKIEIAVENLIENGILDEDVFNQYLKEA*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0029	cloud	direct	high	137	0.993	GCA_003944155.1_02038
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	15306	15440	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	15307	15441	GCA_003944155_1_9_30	GCA_003944155_1_9_30	+	82553	.	.	hypothetical protein	MKRPNRYPYTRSQWEEETTLVCSGDGTSFKLRVERNRITSEVKQ*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0030	cloud	direct	high	134	0.993	GCA_003944155.1_02040
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	15437	15772	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	15438	15773	GCA_003944155_1_9_31	GCA_003944155_1_9_31	+	82553	.	.	hypothetical protein	MKDLMFWGMFIACLLISAMTFYIMYSQAMVNRDLERKHNDLKNEFLHAFGWDNYEWANNFRDYARKVEELIKFKKEIERLEIIKKALDVQKLEELQKRKDLVEREIQKLEK*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0031	cloud	direct	high	335	0.997	GCA_003944155.1_02041
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	15784	16344	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	15785	16345	GCA_003944155_1_9_32	GCA_003944155_1_9_32	+	82553	.	PFAM:PF14311.5	intron-encoded-nuclease	MIPKYKIDVWEKRARKKYSDTNEVYRHLPKGMLANLYHKMEHRNVEKGYGSLPFSLYDFREWAYSEEKFLYIFDIWSKSGYKKEFKPSVDRTNPFIGYRFENMTWMFWEDNKIKSHGEVGAKKQKAIIMLRDGKRVGSFKSIKDAQFFLGMKSNGNISECLSGRRNNVFGYQFIYENPELLEADHD*	phrogs_hmm	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0032	cloud	direct	high	560	0.998	GCA_003944155.1_02042
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	16337	16555	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	16338	16556	GCA_003944155_1_9_33	GCA_003944155_1_9_33	+	82553	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MTEIKLIFFIASCVISFYAGAQFNKPVVTQKGQNDGKYYVVVRHYGRYLVNEEQYNSLKIGDDMPEFLKRKD*	mmseqs_cdd	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0033	cloud	direct	high	218	0.995	GCA_003944155.1_02043
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	16559	16801	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	16560	16802	GCA_003944155_1_9_34	GCA_003944155_1_9_34	+	82553	.	PFAM:PF10828.7	Rz-like-spanin	MNSDKALNSFTYFILCVFVAVVCFGFYKQYEANQNLNDKVFRLERQNAEITEQVNKLNKTIDAEIAKNLKETAERNNVGG*	phrogs_hmm	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0034	shell	direct	high	242	0.996	GCA_003944155.1_02044
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	16788	16973	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	16789	16974	GCA_003944155_1_9_35	GCA_003944155_1_9_35	+	82553	.	.	hypothetical protein	MLEDKIAQLEHAKECYLRDLEPEHMAVVQRDFGLQVASKRRDWLKKQVKRCDEEIECLKKE*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0035	shell	direct	high	185	0.995	GCA_003944155.1_02045
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	16955	17395	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	16956	17396	GCA_003944155_1_9_36	GCA_003944155_1_9_36	+	82553	.	PFAM:PF05263.10	transcriptional-activator	MSEERVIPLLPEINEKRTIRKAKAKLREYPKWREIACDEAIQKXTQEFTFEIRGASGPNRPIENLAIRRVDALSELEEIEQAVSRLFNPTYRFILYSRFLKNVPDSAYVIYTELGIEKTRYQELLDRALLAFAWQYRGAVLVCEKR*	phrogs_hmm	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0036	cloud	direct	high	440	0.998	GCA_003944155.1_02046
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	17714	18310	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	17715	18311	GCA_003944155_1_9_37	GCA_003944155_1_9_37	+	82553	.	PFAM:PF03592.15	Terminase-small-subunit	MVTSQTTFFEKSSPLLVRFQKFPSVAHATFYFVRKVVVDIGLNQRQKIFASEYLRTGNAYQSATLAGYSEAYARGNVTKLLENESVKSFIQAEMDKMHDKNIMSAREALSILSDIARGKRDEEVLMMNPVTGEVDRLTKKADNATVIKAIQEILKRYPTSKQSEKMELEIEKLKAQLETGNMAEANITIIDRWAEDDD*	hallmark_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0037	cloud	direct	high	596	0.998	GCA_003944155.1_02047
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	18300	19607	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	18301	19608	GCA_003944155_1_9_38	GCA_003944155_1_9_38	+	82553	.	PDB:5OEA_B	Large-Terminase	MTIDIQKNVNPHFKPVWISKFPYNVLAGGRNSFKSSVVALNMVYGMAKFLKKNKKANAVVIRKVGNTIRDSVYLKIQWALNLFGLSGRFKATVSPFKIQDKVTGSCFYFYGQDDFQKLKSNDIGNIIFVWYEEAAEFSNQEDFDQTNVTFMRQKHPDVPFVKFFWTYNPPRNPYSWINEWWDSLKEREDYLLHKSSYLDDELGFVTEQMLADIERIKENDYDYYRYIYLGEPVGLGTNVYNMDLFHRVDKIPDNERVIGQLFAADTGHQQSATTCLHAVVTNKRRLYLVDNYYYSPAGKTHKKAPSVLSKELHEFVTRQTKLFVNVPVVEMTIDSAEGALRNQYLEDFGVRWHPVAKKKKIVMTEYVQSLLADGRFYYLPTENNLRYFIEEHKRYQWEEKSIMNDDPKVVKEDDHTCDAFQYMIVDNLQLLGLKA*	hallmark_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0038	cloud	direct	high	1307	0.999	GCA_003944155.1_02048
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	19672	21129	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	19673	21130	GCA_003944155_1_9_39	GCA_003944155_1_9_39	+	82553	.	PFAM:PF05133.13	Portal-protein	MTGQSLGNITEHPKIAVTQEEYNRISRNLTYYQSKWPEIEYLNSNHEKKKRSMNHLPIARTASKKIASLVFNEQAEITVDDTTANKFIQETLKNDRFNKNFERYLESCLALGGLAMRPYVSGDSVKVSFVQAPVFLPLQYNTQDISSAAIVTKTIKAIDKKNIYYTLIEFHEWDKDGKYVITNELYRSTEKEKVGDRVPLAEVYEDLEEEVVLEQLTRPLFTYLKPPGMNNKDINSPLGLSIFDNAKSTIDFINTTYDEFRWEVKMGQRRVIVPDQTVRVGFARDGDIDLVKREFDPEQNVYEQIDGGKDTPVSITDLTTPIRSDDYIKAINEGLALFEMQIGVSAGMFTFDGKSMKTATEVVSENSDTYQMRNSIVSLVEQSIKELVVSICELGALYDLYSGPIPTLENVTVSLDDGVFTDKNTQLEYYTKALASGLVSREYAIEKALGFSTEEAKKMAEAVRKEAVADVGSVRSQTDVDIYGE*	hallmark_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0039	cloud	direct	high	1457	0.999	GCA_003944155.1_02049
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	21134	22279	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	21135	22280	GCA_003944155_1_9_40	GCA_003944155_1_9_40	+	82553	.	PFAM:PF06152.10	minor-capsid-protein	MKHKYPIKFDDEQLILEAGQVADTYHKLTLDLFDEVIDRLLERGTASLADNPYIWQLEKLNQMHLLNEQNLKTIAKYSKIGEEQLRQVIEGEGFKIYKDTKQHLIDDLGEGELGDSSHVQELLSGYFNQSHGDIKNLINTTLPQAVSEVYRGIIQDSVARVVTGLSTHDKALNETVMKWQDAGFKGFVDRGGKRWKIDNYARTVIKTTAIRSYREMRTMPAEELGIDTYYYSKKATAREACAPLQHHIVTTGMAREEEGYTILSLNDHGYGTPAGCLGINCGHILTPFIPGINELPELGEDVKNVTPEQAIENANAEAKQRALERSIRNNKEKLHVAEKLGDKELIDKYKSKVRIRQGAMRDYLRQHPFLHRDYAKEKYYG*	hallmark_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0040	cloud	direct	high	1145	0.999	GCA_003944155.1_02050
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	22436	23014	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	22437	23015	GCA_003944155_1_9_41	GCA_003944155_1_9_41	+	82553	.	PFAM:PF06810.10	minor-structural-protein	MSLKREMLTEAGIADKTVIDNIMQAYGAGIENAKSQVKSEMQAEADTLKGQLEQQTQALKDLQAKEGASEESKKQLADLQAQFDQYKTDSEAKLAQVTKTNAVALALKDVGAYNSDDLMRFIDLDKIELGEDGKPVIEETIQGLRESSPYLFQSQDNAQPKPTFSTGGNPPADGGENLSAEDKALFAGFDSV*	hallmark_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0041	cloud	direct	high	578	0.998	GCA_003944155.1_02051
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	23042	23866	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	23043	23867	GCA_003944155_1_9_42	GCA_003944155_1_9_42	+	82553	.	PDB:2XD8_E	Major-Capsid-protein	MAVNYAAKFDAKVDERFAKEALSTGIINQDFDFTGVDTVKVYSVPTSKMNDYKTTGQNRYGEAEELGNTVQTMVLTKDRSFTFTIDKKSEQDTNGVMEAGKALARQLSEVVIPEVDTYRFSKIVAGADTDNVATGAITKDNAYEAVLDGQVKLTDAFVPVAGRVLHVSPKFYKLIKLDPTFVKNSDLGQEITIKGQVGMIDGLPVVLTPTSRLPENVDFVIAHPVATTSPVKLEDYKIHDNPPGINGKLVEGRIRYDAFVLDNKKKAIYVHKSA*	hallmark_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0042	cloud	direct	high	824	0.999	GCA_003944155.1_02052
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	23882	24040	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	23883	24041	GCA_003944155_1_9_43	GCA_003944155_1_9_43	+	82553	.	.	hypothetical protein	MAKKKTEEITEEVAEAVSNPRLVTLTKDGVSFTVASQIQVSAFLASGYEVEE*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0043	cloud	direct	high	158	0.994	GCA_003944155.1_02053
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	24045	24236	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	24046	24237	GCA_003944155_1_9_44	GCA_003944155_1_9_44	+	82553	.	.	hypothetical protein	MAKFKATSNVVFVIDGEEIQFDENKKYEIEEQKAAELNAKGLLAHPELSPFFVPIDETDEAEE*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0044	cloud	direct	high	191	0.995	GCA_003944155.1_02054
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	24258	24665	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	24259	24666	GCA_003944155_1_9_45	GCA_003944155_1_9_45	+	82553	.	CDD:cd08053	Head-Tail-Connector-Protein	MATIAYLTKEEYVELGFDEFTGFDTRLKQAELAIDLFIRHFYDYNDFESDFKPRKKAVKLATAYQVHYLESSGVLTAEDKQSISSMTLGRTTVSYSSQNSSRAHEIASGYNLSLDAFNALKSVGFLYSGVDRYGR*	hallmark_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0045	cloud	direct	high	407	0.998	GCA_003944155.1_02055
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	24655	25005	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	24656	25006	GCA_003944155_1_9_46	GCA_003944155_1_9_46	+	82553	.	PFAM:PF10665.8	Minor-capsid-protein	MVDKRALVDSATIQKRADKDDWGKESYSDPLLLSPVRFDRNYNAPGAINNPAGTKNPTFSKPSVLFVYTQYCDVQIDDTYRSGILKDGDREYIINKIIPVYYPFKNKVYCYEIEVM*	hallmark_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0046	cloud	direct	high	350	0.997	GCA_003944155.1_02056
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	25005	25367	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	25006	25368	GCA_003944155_1_9_47	GCA_003944155_1_9_47	+	82553	.	PFAM:PF11114.7	Minor-capsid-protein	MTSIKLKIDLSKAKERINKTSVKKGQLAIANQALIDMDPYIPLKNGPLRLSGHVTGGGSQIVYNTPYARAQFYGGAYNKHRSFSFSNYSTPGTGKRWDLKAKPLHANKWAEIGLKAMGIK*	hallmark_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0047	cloud	direct	high	362	0.997	GCA_003944155.1_02057
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	25364	25777	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	25365	25778	GCA_003944155_1_9_48	GCA_003944155_1_9_48	+	82553	.	PFAM:PF12691.6	Minor-capsid-protein	MTKNNNDFAVVLRAFIDSLGIPFKCRLDFLDEKEGLVLYPLPGGQVKKEYMDGSKDVSLIFEIAIKTKDQQKASECLWEINKELSEFDLDLPSKNDSYIFNDLTVTAPTLNERDGQGYYIYLQDITASLTILNTKGN*	hallmark_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0048	cloud	direct	high	413	0.998	GCA_003944155.1_02058
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	25781	26230	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	25782	26231	GCA_003944155_1_9_49	GCA_003944155_1_9_49	+	82553	.	PFAM:PF08813.10	tail-tube-protein	MVRNKNALRGHFIAQVTDPKVEPEKSAYLELAKWISDIDDDTDETTTSTAYYDGDGTEETTVTGVKEAYSFKGTYDAEDLAMKYIADLKRKKDKDRLVWHKIVDSDGKNQHVGIATVTGIKAGSGAASDYELFECKISYNSIPKTSAVV*	hallmark_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0049	cloud	direct	high	449	0.998	GCA_003944155.1_02059
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	26287	26751	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	26288	26752	GCA_003944155_1_9_50	GCA_003944155_1_9_50	+	82553	.	PF10666.9	Phage tail assembly chaperone protein Gp14 ()A118	MSIQIEVKRSGFPVKLGEVELWFDTSIENLTRFFDIENEVNNRFNEYQKKIADKSNNGEFDDLKKGEISKKTVDEALGLERKTTEIKYDVVFGDGTFAKLYKVYPDYEALDEAFHQVDTLIGAELEKLAIERKKKAKTRAEEYKTKAKSKKKKK*	hhsuite_tools	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0050	cloud	direct	high	464	0.998	GCA_003944155.1_02060
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	26764	27330	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	26765	27331	GCA_003944155_1_9_51	GCA_003944155_1_9_51	+	82553	.	pfam06854	Bacteriophage Gp15 protein. This family consists of bacteriophage Gp15 proteins and related bacterial sequences. The function of this family is unknown	MKLNEPLETSFKVEGKTFEIDCSFDVVLDVFEMFGDDVLNDAEKLQLAIEIMTDEVIEDPELASRIWKYIDEHFLKTKRERVVYDRNGNPMPVSKNEDDDKARLIDFEIDAQDIYASFIQAYGINLLDEQGKLTWAEFMALLNGLPEDTSMMKIVQIRSWKPSSHDSSEYKNLMRKLQRKYSLDREEE*	mmseqs_cdd	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0051	cloud	direct	high	566	0.998	GCA_003944155.1_02061
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	27334	31233	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	27335	31234	GCA_003944155_1_9_52	GCA_003944155_1_9_52	+	82553	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MADGKITIEVEVNGQKLSSLSADLKRIESDAKRSGEGFKQASNKIKESGDKAKSSGQGFKEAGDKAKSASETAKAGGDGFKQAGDRAKNAGDVAKGAGSGFDEAGNKAKDSGEKAKQGASGFDKIKESIKNFSVGAVGFKLASSAMDLVSASLDKAINRFDTLERYPKVMKSLGFSAKDVANSTKELSDGIDGLPTTLDDVVKTTQKLTSMTGDLKTSTKLTLALNNAFLASGASTEDASRGLQQFSQMLSAGKVDMQSWKTLQETMPYALQKTAESFGFAGESAQKDFYSALLNGEITFKQFSKRLIELNQGTNGFAEMAKKNSEGIQTSWNNIVNAFAKGIANVMKAFDDLSKATTGKSIAQNLDGLKAGVNGFFKFVTDGIRGLIPIVQSVNNVLGALKPILDPLLSALGGAVVAILAFKGAMLGLAIIRGIGGLIATMVTSLKVFINTSLIAEGATVGLSGALATLSSGGIALVVGALIGFVSWLSRETDEQKKAREASEKHKESIKKLNDEVAQGKERYEDHRREIKATADENEKLVRKIEELSSVQKKTASQKKELAAATQMLNNNVSGLNIVYDKATGSINMTADAIRRQIEVSKQSAEAEAANQRLVEIAKQKLEVEDKIADVKSKLKDAEEKLGESASNSTIKEVALKKVREDAGKQISDLEGSLKSLESQYEETSNTAVKSAEASAQAVEDASGRQVLTWNTLNESQRKLVEDMRSQYETMRNEVQNAFQAIEQQAVVSVDQMTANLQKNIEYVDKWAGNLETLARRGLDQGLIEQLRQAGPKAAEQTQALVEASDEQLGNLNQKWSEAGDKAKEGFLRGINAAGVELAPEVQAMVTAIGDEFRKALQDAGFDVKAREIPEKVGEGITSNITAAAQAMSGIAESAKQGFNGVPEEARNSGAQVSGQYAQGITDNQSVAQGAGELLKSASLGALDGIFGDAQTKGSELGSGLSSGVSGGIEAVQGAANALKAGAVTSVAGMASEGQAKGSEFGGGIASGIGIGQQLAVGAASVMNIAISAQFLAMASDGQSKGSQFGTGVGAGISSTQGIATGASNALKETVNASVSSLGRDGRKAGSDFGSGATEGIQSHQGSAYSAGSSLRDNATNGMQGGYDSAYGAGMSIGEGLTAGIYAMAGSVANAAASIAYGAVSAARSALSINSPSKVFRDKIGRAIPEGWALGIDKYSWYVDNSMDDLAKNTIDASAKFVSGFGLDIPKSAEIASGLNASLAYRFGGGGSAGVSNSTSNVTNNYTLNATGQGNSDFFTPDNMRRLIRELAYYTRQERGRMI*	hallmark_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0052	cloud	direct	high	3899	1.0	GCA_003944155.1_02062
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	31235	31948	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	31236	31949	GCA_003944155_1_9_53	GCA_003944155_1_9_53	+	82553	.	PDB:2X8K_A	Distal-Tail-Protein	MAYISFDGKKSTDFDLRLINEVEHSSASKDISQVTVSGRDGVLLIDNNRLNPVTKEFPFRISTKSDLTKIGERLTDWLAVNGYKDLILSWDSDFVYRAAFLETFSISEILRQFGSVKLNFLCHPIKFYKDGRDRLTVSNGQTIQGKGNVNAKPVIIISGNGTTTITINGRQTKLKDIQGGITLDMQTNQVYSGGLPAWDKVVRAPQYKMPYLEPKNNRISWDGNFTVSIIPNWGVKI*	hallmark_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0053	cloud	direct	high	713	0.999	GCA_003944155.1_02063
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	31945	35757	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	31946	35758	GCA_003944155_1_9_54	GCA_003944155_1_9_54	+	82553	.	PDB:3GS9_A	tail-protein	MKPILFNKNEQQFDTYGLGEIDVTTGNVTRERNGLYTFYAEYPANGPLASVLEKEMKIKVDAGLRTKNQTIEISRIVKDSSGVLKIYGSHIKHKLEYMAVRHGINLSGTASVALAIWANNLIGDYRFSTWSDIDTTGSTTFTADKMTNAHLALGGVEGSILDVWGGEYEFDNLTVRLHKQLGRRAPTVLEYGRNIISAESDESIEESYTSVYPFATYTPDSQGSDSTPAPITVTIPGDYVDSKYISMYANRRIKVVDFSSEFKEKEVPTPDKLRAMTLKFMEHNKIGAPKINTKIEYVDLASTLDYQDNKIIEELEFCDIVPVYYPSIGITEDDAKVTKIVYDFVNERNESVEFGIIGESIRSALTGGLSGRMDLLENRQKAIESVLPDYLLNASGNKVWYQKPAEGTEHKLGDLWFEKNGQYDRMYVWNGEMWEKRIDTEDVDKVKKDIDEKLKQSTESIQQAENKASEALTKAGAIIDSQELLDKINAHLYSDANNDDNGILGRKFRQQREANRSTRNIATATRDKLTDYQRTNDENLVRIGQQLDNTVSKAEMKQTADGIRETILELQTNGSGGPNMIRNSRADDGLQYWTEANNKLGFTSHPFYFNGQKKMFELRPGAVVQSPRFIVKRNADYTLNILGFDNNSKYFRIYFCKRKKGSTADFEEKQLVFDGQPQWTDGPVFNNVKTAKKSFKFNIGEFDDGYLQFEYDRNNPNKWGGLFMTELDFYEGTTDRKWQPAPEDGAEWLNGKITTLDRTLDGIRATVTEAKSYIDADGQRRQEINQLIKDETAKGVNTVLSTVEQSGYAKRSEIQSITETQKLYDRIIGTTEDGIKQNIARMTLTDSLFQTEVSKVVNQELTSSNYVANPFTMSDYVRKYFGKGDTSTVSLVSSGLSAFGKLEFHANSRLTSNDAVWLPLNRIPERVKDLSFSIVVEGIDKCNISVAIGTENASSSISYKRQNDTIYGTWTGISYYYKGSDGVYLKISFSGLNGESVFLKKPIVVEGREPKFDFEVNKRMEVDQAVRSVQTQLAGSWAIKNLNSAGDIISGINLGADGRNRITGKLTHITNETLMDRASIKSAAIESITADQITTGTLNASRINVINLNAKSITSGTFRGLEYEGGIIRGNNGNTVINLNTNVTTYNGTARIEFKSAYNNLVYSSGGTHAFLAPTQRNGTSYAAWAFGVGTSSSLDPNAGFTGIKVFNDPGAREVVLVGNVRFVKDTFTRDAPAKSLVDILYQIQYNFVKVKDWFSRNNLGSPGLYDIEL*	hallmark_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0054	cloud	direct	high	3812	1.0	GCA_003944155.1_02064
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	35772	35972	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	35773	35973	GCA_003944155_1_9_55	GCA_003944155_1_9_55	+	82553	.	.	hypothetical protein	MTDKINQDIINDLGIQLANKIIEASEYKSRLIAVQGDLDAFRAVLARNDELRAKFEEEQAKGETHQ*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0055	shell	direct	high	200	0.995	GCA_003944155.1_02065
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	35969	36538	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	35970	36539	GCA_003944155_1_9_56	GCA_003944155_1_9_56	+	82553	.	PF07104.11	Protein of unknown function (DUF1366)	MTFEVKDASGQYGPDGTVIKTIVTIYQQQPYYATAAFPLDGDHTHKEANELLEMIKQEFFKEHYTAYAFKELDKSVSSQNEKVDKLAKLAEATVLAVATNKDNPVDPTIYKRYLELIDPAVTGKLYHAYDVFSLEDASHEEKYGEGKRVLVQVNKDFTYDGQSVSEFKTGGSLELAGVGAAFPWTMPKE*	hhsuite_tools	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0056	shell	direct	high	569	0.998	GCA_003944155.1_02066
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	36551	36835	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	36552	36836	GCA_003944155_1_9_57	GCA_003944155_1_9_57	+	82553	.	PFAM:PF04531.12	holin	MPEYERFILQLGLSLIPVLGLYLSMRDRATKEENRNTIMEKDIENLREFKASASKRLDNHDEQNKAILVLAEQVKVLSEDVRELKTLITSNSNR*	phrogs_hmm	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0057	cloud	direct	high	284	0.996	GCA_003944155.1_02067
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	36855	37037	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	36856	37038	GCA_003944155_1_9_58	GCA_003944155_1_9_58	+	82553	.	PFAM:PF16945.4	Phage_r1t_holin	MKTFAKKLGIKVIKTMSQAALGVIGSSALLTEVNWAVVASTIALSGLTCVLMNLSELKED*	common_virus_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0058	cloud	direct	high	182	0.995	GCA_003944155.1_02068
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	37059	37667	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	37060	37668	GCA_003944155_1_9_59	GCA_003944155_1_9_59	+	82553	.	PFAM:PF05382.12	peptidoglycan-hydrolase	MADIASWFEARQGTITYSMTGSRNGTDGTGDCSGTISQALKDNGFAIQGLPSTVTLGAQLARVGWVRISRNEDWNAQRNDIVMLAWSADMSGSGGAGGHVGAMRDSVNFISCDYSTQGAPGQAINTYPWDYYYNANNPAYIEVWRYNGNAPEKPLPNTAVAPSSSRKPSSKAYYLANDVQLVNDIYQIKCDYLCPVGFDWVN*	common_virus_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0059	shell	direct	high	608	0.998	GCA_003944155.1_02069
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	37875	38636	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	37876	38637	GCA_003944155_1_9_60	GCA_003944155_1_9_60	+	82553	.	PFAM:PF05551.10	homing-endonuclease	MSKTKNGVCANCHTTFELSRKQVTRVKQGKSVFCSDVCSLEKYGKSKITITDIPCCRCGKMFTPTYSQYKRYKCNNYVSNSFCSSECRWKKSYPYKYHNDYVSVFVDEKEVLLDVDVFKKYNKTFYIQKDKRNNYYSVYVYEEGKKILSRWIMSVTDKNQSVDHINGNTLDNRRSNLRVVSHQENMMNKTTYKNNTSKIKGVNLNKKGLWVARIQVGNQRIFLGSSKDKSVAEKLRIEAEKKYFGKYDRKYLK*	common_virus_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0060	cloud	direct	moderate	581	0.762	GCA_003944155.1_02070
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	39748	40023	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	39749	40024	GCA_003944155_1_9_61	GCA_003944155_1_9_61	+	82553	.	.	hypothetical protein	MKILNTEIAHINESKLGFEHWVDVTYQAPILKGTYTIRVMLLLAFKTEDPEVIDYMVREWKRRDIIHHSFLMYEVERNDYKHNLSPQIRPK*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0061	shell	direct	high	275	0.996	GCA_003944155.1_02073
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	40476	41258	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	40477	41259	GCA_003944155_1_9_62	GCA_003944155_1_9_62	+	82553	.	PRK05299	30S ribosomal protein S2; Provisional	MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFIRDAAANDAIILFVGTKKQAAEAVKDEAERAGQYYINHRWLGGTLTNWSTIQKRVARLKEIKRMEEDGTFEVLPKKEVALLNKQRARLEKFLGGIEEMPRIPDVMYVVDPHKEQIAVKEAKKLGIPVVAMVDTNTDPDDIDVIIPSNDDAIRAVKLITAKMADAIIEGRQGEDSVESVEAELAATETQADSIEEIVEVVEGDNA*	mmseqs_cdd	nonviral_gene	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0062	persistent	direct	high	782	0.999	GCA_003944155.1_02075
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	41337	42380	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	41338	42381	GCA_003944155_1_9_63	GCA_003944155_1_9_63	+	82553	.	COG0264	Translation elongation factor EF-Ts [Translation, ribosomal structure and biogenesis]. 	MAEITAKLVKELREKSGAGVMDAKKALVETDGDIEKAIELLREKGMAKAAKKADRVAAEGLTGVFVNGNVAAVVEVNAETDFVAKNAQFVDLVNATAKVIAEGKPANNEEALALTMPSGETLEAAYVSATATIGEKISFRRFALIEKTDAQHFGAYQHNGGRIGVISVIEGGDEALAKQISMHIAAMKPTVLSYKELDEQFVKDELAQLNHAIDQDNESRAMVGKPALPHLKYGSKAQLTDAVVAQAEEDIKAELAAEGKPEKIWDKIIPGKMDRFMLDNTKVDQAYTLLAQVYIMDDSKTVEAYLESVNASVVEFARFEVGEGIEKAANDFESEVAATMAAALGQN*	mmseqs_cdd	nonviral_gene	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0063	persistent	direct	high	1043	0.999	GCA_003944155.1_02076
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	42486	42836	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	42487	42837	GCA_003944155_1_9_64	GCA_003944155_1_9_64	-	82553	.	.	hypothetical protein	MTLDWLTYTRHVLTWLLSTLFLYTVFSAHYVNVQIAILVACFFIPFLFEQAKMKQKTKWTLNLLITLATVIGILFTQKFRITFTYSQITHLLIFGILLIFIDAVISHSNLMRRVAK*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0064	persistent	direct	high	350	0.997	GCA_003944155.1_02077
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	43127	44293	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	43128	44294	GCA_003944155_1_9_65	GCA_003944155_1_9_65	-	82553	.	PDB:1Z19_B	Integrase	MKITEHKKKDGTTVYRSSIYLGIDSATGKKVKTTISARTKKEIKSKAIQAKVEFKKNGSTRKQRTTISTYSELVELFWRTYQHTVKTNTRLKVKGCLNNHLLPSFGSYKLDKLTPVIIQTQVNKWADKYNQDGTGYKEYNNLHALNKRILQYGVSIQALESNPARDVIIPRKIVRDKHEIKYFQDEELKKFLAYLDKLENTFINFYDTVLYKTLLATGLRIRECLALEWSDIDLQNGTININKTLNILNQVNSPKTKSSYRVLDIDHKTVLMLRLYRARQAENGRKIGLTYEKVFPNSFDNYINTRKVDYRLHKHLKNANCIDLGFHAFRHTHASILLNAGLPYKEIQTRLGHAKISVTMDTYSHLSKENQKRAVSVYETALEKIKSS*	common_virus_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0065	cloud	direct	high	1166	0.999	GCA_003944155.1_02078
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	44517	45179	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	44518	45180	GCA_003944155_1_9_66	GCA_003944155_1_9_66	-	82553	.	COG3655	DNA-binding transcriptional regulator, XRE family  [Transcription]. 	MIKTNFAVLIAERGLKIADVYESTGISKTTLMALAENTGKGVQFDTVDKLCNFLDIELKDFFVYVPYIWDMKFKQNIEEKDSXYIIIRLKSNRSEKDYFLTTYFFHPQNYNFPLDDDSFSLWISIDLESSDAYSRDDFFQFLSDLPISMKTTFFNQILETLKLNVLLENNVVTCSREVFDDSDGLQNITLNKNDKVYISFFDPYSTGKEKNFESSKIITV*	mmseqs_cdd	nonviral_gene	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0066	cloud	direct	high	662	0.998	GCA_003944155.1_02079
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	45340	45537	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	45341	45538	GCA_003944155_1_9_67	GCA_003944155_1_9_67	+	82553	.	PFAM:PF10078.8	transcriptional-regulator	MKNNLRVILAKQRKKISDLHKESGLSKTTLTSLYYERTKNPEIETLIKISNVLGVTIDELLCTEK*	phrogs_hmm	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0067	cloud	direct	high	197	0.995	GCA_003944155.1_02080
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	45761	45961	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	45762	45962	GCA_003944155_1_9_68	GCA_003944155_1_9_68	+	82553	.	.	hypothetical protein	MTIDINNMTQTEFNNLINDIKEKHPKLYQIICDFVDRKLSAEEVNSILEMEQSDLVDYINNYKVRV*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0068	cloud	direct	high	200	0.995	GCA_003944155.1_02081
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	45992	46306	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	45993	46307	GCA_003944155_1_9_69	GCA_003944155_1_9_69	+	82553	.	7LWR_D	DNA Packaging, Terminase, VIRAL PROTEIN	MYDMNIYDCLSEEGKRAISERVAPDLIKYSIELAKNATDLSKQFEPTLLGLISKKRLQQELEITDKTLDKWRMNGLKQYQPPLEDTRKIYYRVSDILLFLGVDK*	hhsuite_tools	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0069	cloud	direct	high	314	0.997	GCA_003944155.1_02082
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	46303	46452	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	46304	46453	GCA_003944155_1_9_70	GCA_003944155_1_9_70	+	82553	.	.	hypothetical protein	MTIFDSHPAYGRGLRVGDSDIYKDRRPTVEQLNLQKHLKKLRKKRRKGR*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0070	cloud	ambiguous	low	5	0.033	GCA_003944155.1_02082
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	46454	47320	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	46455	47321	GCA_003944155_1_9_71	GCA_003944155_1_9_71	+	82553	.	PFAM:PF09250.10	Bifunctional-DNA-primase-polymerase	MAIYEARGFQSNLVYLFDKKEPFQYIEDFKPLVVPEHSDIEEYKRKQAPYCLSGKVIQDSKGSYHRNNQTLIYRDLIFLDYDNIAMTSESFIEAVSKGLSGFSYMLYPTIKHSPEKPRFRLVVKPSTSMKEPVYKQVVKEIADKIGLPFDMASLTWSQLQGLPVTRGKIEDYQKVVYHGLDYPVPQEERVKSPIESKRNYRSPQSTGRRSITMRVIDTLLDGFGEEGGRNVALTRFVGLLFNKWVDCDIARAYELTRIANSVTNNPLPEKELDRTFESIARTEFRKRG*	common_virus_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0071	cloud	direct	high	866	0.999	GCA_003944155.1_02083
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	47400	48848	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	47401	48849	GCA_003944155_1_9_72	GCA_003944155_1_9_72	+	82553	.	PFAM:PF04735.11	DNA-helicase	MKELLDRVFQAGEQWRAENAEIKLNKNTGESKTIAPLPSTFTVAKALYDIVTFTFISKSNIPDYSLLYIYNLDEGIYSASNDLFNVLCKTFDVRIKPREWPQIKLMVRTLTKIRKPLESANLIPVQNGIINLKTKELLPFNPKYIITSKIDTAYKEPINEPTDQEGNTFDDWLNSIACGDSEIVTLLWQIMLEAINPNHTRNKFAIFYGDGNNGKGTFQRFLINLIGESNISALKPAQFGEKHNLETLVGKVCNIGDEAPNEYLKNPSDLMSITSGDTVLVNPKGRPAFEATFKLFNIFSGNYIPNGGNKTKGWYRRIMIVPFNADFNGDKEKPWIKNEFLSDKRVLEYALYKAINQEPFERFIEPKAVKGLLEEYQESNDYVLSWIKHEYMGKGWHELNAVPVFLITRDLKIYAEDMGINKPNVYGIGKEVIKLLQQLTPYHYALKKRRVPPEDFDKLNAWSHDKNKMRSPQYCVTLCDVV*	rep_hall_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0072	cloud	direct	high	1448	0.999	GCA_003944155.1_02084
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	49101	49271	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	49102	49272	GCA_003944155_1_9_73	GCA_003944155_1_9_73	+	82553	.	PF17356.2	Phage-like element PBSX protein XtrA	MKNEDENELYELLSQGFIFYLKDGIINTEMAPRFGRLTLYYQDGKITHLEILETKK*	hhsuite_tools	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0073	cloud	direct	high	170	0.994	GCA_003944155.1_02085
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	49351	50049	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	49352	50050	GCA_003944155_1_9_74	GCA_003944155_1_9_74	+	82553	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MQKIHIKGAIIPISSIPEYKKQGREYTSLEDIYIPTSNEPLEVEINSGGGDVYTANEIYAKLRDYKGVVTVKITGIAASAASVIAMAGDIIEMSPIAMMMIHNVSALTYGNIRQLQQQIRTMDVANDALANAYHERTGLSKEKIKEMMDVETWMSCDTAISLGFADRKMFVKNITSDKVRQIAASIPSAGVYEYMEKTVKPLLGLNKKLEATKKNKNVNLGDYLPMFKAKKG*	common_virus_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0074	cloud	direct	high	698	0.999	GCA_003944155.1_02086
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	50083	50943	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	50084	50944	GCA_003944155_1_9_75	GCA_003944155_1_9_75	+	82553	.	.	hypothetical protein	MTIKEAREILFDLKRELELVKGYSKVNTFTDREYLTNVIPLLSDLEQTEAVACIKSNSELIEELIKKVEQITTNTYFTDKEKEELYLDVRKKYEGVFSDKAKLFNKLFKASSSEALKRVRSAINCLESIYDNTVLGVLISVSNTLRYIDNDFKNKENNISFNGRLTPVGDVLDKLIPFVPDLSARDREYYNARFGYTAKYSEAIETYLKDKGLPASSRYIDREAEERGENSTQRKASIVEKWLEDEQEKQIKLNYAQERINEIASGNNFETLEEYKKRFKEKLLGE*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0075	cloud	direct	high	861	1.0	GCA_003944155.1_02087
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	50943	51374	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	50944	51375	GCA_003944155_1_9_76	GCA_003944155_1_9_76	+	82553	.	.	hypothetical protein	MANKRDFRIEFNTEILWLQRYFKGTLKKMIAELREELHSRKYNQFGDVKVQTTKKVTSQALHNIIVEEDSTRLQMLLTWERVIKEQVDKTDKNLLAVIKAVFVHGTMNVSGAGTRYLYYSKTTTYKILYTWFEQLTLAYFKAR*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0076	cloud	direct	high	431	0.998	GCA_003944155.1_02088
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	51745	51996	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	51746	51997	GCA_003944155_1_9_77	GCA_003944155_1_9_77	+	82553	.	.	hypothetical protein	MKIINIELASVKQSALGFEHWVNVTYRVPILKNEYTVKLLLLMDFKIEDKELIDYLVSTWKYRELVLHSVQMHKLEKQSEDVV*	.	hypothetical_protein	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0077	cloud	direct	high	251	0.996	GCA_003944155.1_02089
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	52321	52779	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	52322	52780	GCA_003944155_1_9_78	GCA_003944155_1_9_78	+	82553	.	COG4463	Transcriptional regulator CtsR [Transcription]. 	MSGKNTSDNIEAYIKAILEQAGMVELKRSELADVFQVVPSQINYVIKTRFTESRGYVVESKRGGGGYIRIGKVEFSDRHQMICELFDRIGEQVSQQFFTDIIQLLFDERIMSEREGNLLLAISSDCVLGVDAPIIRARMLKKVLQQLDRKGT*	mmseqs_cdd	nonviral_gene	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0078	persistent	direct	high	458	0.998	GCA_003944155.1_02090
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	52786	55215	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	52787	55216	GCA_003944155_1_9_79	GCA_003944155_1_9_79	+	82553	.	PDB:4M4W_K	Replicative-helicase	MKYSKALIVSIEEAQQLASHFESEYLESWHLLIAFSNYPYSVAGSVLNDYPLEIDHFEDAAYHVVGKSYQKEGQFSILPFSHRLTTLFKEAKAIAEATHAKEVGTEHILYAIISDRGTLATRILEFVGFSYEDKEGVLRINDLRRNLEQKSGWTKNDLKAIRSLHKGFNQAKQNMANMMGMPPTQSGGLEDYTRDLTELARSGQLEPVVGRDQEISRMIQVLSRKTKNNPVLVGDAGVGKTALALGLAQRVASGQVPHELAKMRVLELDLMNVVAGTRFRGDFEERMNNIIDDIEKDGKVILFIDELHTIMGSGSGIDSTMDAANILKPALARGTLRTIGATTQEEYQKHIEKDAALSRRFAKISIEEPSVADSIAILKGLKENYEAHHRVTITDQAIETAVKYAHRYLTSKHLPDSAIDLLDEASATVRNNGPQSHAQEDLSPADRAIIAGQFNKLGRLIKEENQPLSSNLKVEETDILTTLSRLSGIPVQKLTQTDAKKYLHLEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGSFMFLGPTGVGKTELAKALAETLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNLGATSLRDDKTVGFGARDIRLDHANMEKRMLEELKKTYRPEFINRIDEKVVFHSLSADHMQEVVKVMVKPLVASLAEKNIQLKFQASALKLLAKEGYDVEMGARPLRRTLQTKVEDKLAELLLTGDLQAGQTLKVGVKAGQLKFDIA*	rep_hall_hmm	common_virus	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0079	persistent	direct	high	2429	1.0	GCA_003944155.1_02091
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	55434	56492	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	55435	56493	GCA_003944155_1_9_80	GCA_003944155_1_9_80	+	82553	.	TIGR01526	nicotinamide-nucleotide adenylyltransferase, NadR type. The NadR protein of E. coli and closely related bacteria is both enzyme and regulatory protein. The first 60 or so amino acids, N-terminal to the region covered by this model, is a DNA-binding helix-turn-helix domain (pfam01381) responsible for repressing the nadAB genes of NAD de novo biosynthesis. The NadR homologs in Mycobacterium tuberculosis, Haemophilus influenzae, and others appear to lack the repressor domain. NadR has recently been shown to act as an enzyme of the salvage pathway of NAD biosynthesis, nicotinamide-nucleotide adenylyltransferase; members of this family are presumed to share this activity. E. coli NadR has also been found to regulate the import of its substrate, nicotinamide ribonucleotide, but it is not known if the other members of this model share that activity.	MKEKIAIVFGTFAPLHQGHIDLIQKAKRSYDKVRVLVSGYQGDRGEEVGLSLQKRFRYTRETFADDELTQVYKLDETSFPRYPLGWDQWLPALLELVGYDSEREELIFFVGESDYQAELAKRDFKTSLQERQFGISATMIRENPSRYWKYMAQPFRRHFTKKVLIMGSASNGKTTLAKDLARYYDAPVSLEYAREYQIQNNVRDDELTPKDYYYLLLGQYAQTSRLIDSNANRGLVVADTNSLVTKAYYDYYLKESPVQDEETDTFDNLFVSILSKEKWDLILFAEPVGTYVNDGFRDMSMADEAIRSDFSSYLKKLKEQYLPDHPTVYLAGSYLDNYQAAKEAINRIYQAD*	mmseqs_cdd	nonviral_gene	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0080	persistent	direct	high	1058	0.999	GCA_003944155.1_02092
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	CDS	56514	57329	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	56515	57330	GCA_003944155_1_9_81	GCA_003944155_1_9_81	+	82553	.	TIGR01528	nicotinamide mononucleotide transporter PnuC. The PnuC protein of E. coli is membrane protein responsible for nicotinamide mononucleotide transport, subject to regulation by interaction with the NadR (also called NadI) protein (see TIGR01526). This model defines a region corresponding to most of the length of PnuC, found primarily in pathogens. The extreme N- and C-terminal regions are poorly conserved and not included in the alignment and model. [Transport and binding proteins, Other, Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]	MEIKNQKLSPEALCAGLKQKNQTFARNFRNVCAAAKKQGINGIAKLLWQDLFGGRSLAQWLYLLALSSLPFILEFTSGQAKHDWLGLFASWTGIVCVILVAEGRASNYLFGAVNSAIYLILSFKASFYGEVLTTIYFFIMQPIGLYTWLSNRVNEQDKEEPSHFEAKKLDWRGWLKYLALTALIWIGMGFAYKSIHSHRPFRDSVTDATNGIGQLLMTGLYREQWIFWIATNLFSIYLWWGSNLHIQAMYWVYTLNSIVGWYQWSKAVKKA*	mmseqs_cdd	nonviral_gene	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_CDS_0081	persistent	direct	high	815	0.999	GCA_003944155.1_02093
GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote	cenote	tRNA	40119	40191	GCA_003944155.1	RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155.1_RJPE01000009.1	GCA_003944155.1|RJPE01000009.1	GCA_003944155_1_9	GCA_003944155_1_9@C0	40120	40192	tRNA-Cys	tRNA-Cys	-	82553	.	tRNAscan-SE score: 56.7	Cys	NA	tRNAscan-SE	.	C0	57330	0	57330	GCA_003944155.1|RJPE01000009.1@region_1_57330@tool_cenote_tRNA_0001	.	.	.	.	.	.