core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	948565	948672	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	1	108	GCA_003971345_1_1_859	GCA_003971345_1_1_859	+	1832141	.	.	hypothetical protein	MTDKMREAYEAIKAEQALQRQSEALMCMFDRLEKA*	.	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	948702	949103	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	138	539	GCA_003971345_1_1_860	GCA_003971345_1_1_860	+	1832141	.	.	hypothetical protein	MMRLVMFGIKLLHSDDFIKSASSSGCFLAIMDKQTNKNHVYNLSTQVQRFELIDIDQVANLANSVQNGAISATVGTLLVRAGVLPALVALSIGAGLPNRTKDAYVCHIEFDNGKSAILQLSKHKYQQFLKHIA*	.	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0002	shell	direct	high	401	0.998	GCA_003971345.1_00861
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	949167	949373	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	603	809	GCA_003971345_1_1_861	GCA_003971345_1_1_861	+	1832141	.	.	hypothetical protein	MALAINIVLGANTVHFSRNIQKATQNAKKYLQGFALLAYMQAADKDKSVQDFLIIDPNPMTDEQKSLY*	.	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0003	shell	direct	high	206	0.995	GCA_003971345.1_00862
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	949468	950307	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	904	1743	GCA_003971345_1_1_862	GCA_003971345_1_1_862	-	1832141	.	PF14337.6	Domain of unknown function (DUF4393)	MTAETFHLIPAITGAVSGAASVGLLNGPLQTLQDIWFVVYGHKWHYKVESIKAQQAMNIQAMQNNIQTGIEKIPANALKDPNVAIIGPALEASRFHMNEENIREMFANLIVSAMDERKDGQMHHAFVEIIKSLSPLDAKNLKYLNQDSAKNISPIANIIRQESNSYHMLYQHVFLGNPEVSDQDLIAPSIDNLSRLKLIDITYNDYLTDDSEYESFYHSAPYQEMTSALDKEHEALNLDISILQNPDLKIEFEGKILNKDERSEKLDQVIKGLESKIEI*	hhsuite_tools	nonviral_gene	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0004	shell	direct	high	839	0.999	GCA_003971345.1_00863
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	950359	951009	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	1795	2445	GCA_003971345_1_1_863	GCA_003971345_1_1_863	-	1832141	.	PDB:2FJR_A	Repressor-protein-CI	MPSERAKADQFPKMIRRYSKGQAKPRNDKMKLLTQCLGVPITWLDYGEGEMTKNNDKLAPITEWDNGAPLDDDEAEIPFYKDIAFACGHGAVNDEVTHETRKLRMGKRTLSNLGVMSENAFAVTARDDSMTPYVQDGDTIYIDKGRKEVKDGRIFAIRFGELCLCKRLYRLPDGGVRIVSDNAAEFPEQVATKQQISDGEFEVIGWVWSVSRLERW*	common_virus_hmm	common_virus	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0005	shell	direct	high	650	0.998	GCA_003971345.1_00864
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	951213	951581	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	2649	3017	GCA_003971345_1_1_864	GCA_003971345_1_1_864	+	1832141	.	.	hypothetical protein	MNEFIIPNSNSVSNDFNYSRTDLDAQEQQIAEFIKKGGKVINLDNSEQPKKKSAKKRDFNNQRINSKMHLVLCYLKRSGKRMTGLQIQEKFGISATTLGSQTRLLNAQASKQYNQNSNPSRK*	.	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0006	shell	direct	high	368	0.997	GCA_003971345.1_00865
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	951884	952846	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	3320	4282	GCA_003971345_1_1_865	GCA_003971345_1_1_865	+	1832141	.	PFAM:PF06152.10	minor-capsid-protein	MKHLINLERLKVHLSNKFKTTLNEIDEFLQLVVFRHEISELNYKEFELLIGESKQKLLGFLAGYALELTQDWQELYDYSYTLETKMIDDDKPDTLNMNEPQFDADSPIKLSAQVGVTLNQILAKFGDEQSTQISNAISYAYTNGLTNQELIQIIRGTRKNRYQDGILQTTTRHAKTIAHTGTAIVASQAKQQFIHDNKDIIKGIKVIATLDLRTSGICRHLDGEIMPIDKAVYPPYHYNCRSSFEIVYDGYQSPKQRTSMDGVVKNQTYYEWLKNQSKAYQVEVLGKKKAKLFQESGVDEFKEFDKNLRPMTLDEIKAQL*	hallmark_hmm	common_virus	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0007	shell	direct	high	962	0.999	GCA_003971345.1_00866
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	952918	953670	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	4354	5106	GCA_003971345_1_1_866	GCA_003971345_1_1_866	+	1832141	.	PFAM:PF06810.10	minor-structural-protein-	MQLKTDENGYAIVQDGKPIYVHDDGQEIAFDAQATMAKISQLNSEAKNHREEKQKAQSLLKSFDGLDADEARRALELVKNLDDKRLIDAGEVEKVKAEARKALDEQLAQKDAQIKKINDDYRSAVIGGEFARSSFIKDKTLLPPDIAQNAFGRHFDMVDGKVVGYLNGEPIYSRTNMGELANFDEAFETIINHYPSKSDILRGSGASGVGVKQPLAQAGTTNLKRSQMSLEQKSAFIKEHGQTAYLNLGA*	hallmark_hmm	common_virus	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0008	shell	direct	high	752	0.999	GCA_003971345.1_00867
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	953674	954441	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	5110	5877	GCA_003971345_1_1_867	GCA_003971345_1_1_867	+	1832141	.	PDB:4AN5_F	Major-Capsid-protein	MAITTNNDVLIYNELAQTAYLERLQENLAVFNKASNNAILLSDENLQGDFTKESFYKIAGKIEHRDVNSTSVVQAKKIAMAERVGVKVPFKFGPYETTEEAFKRRARSVDEFSLLLGQDYADALMAGYWKYATAALQGAVGSNSSMLVTAKLSEHGRKVITQGMRKFGDKFSNLSLLVMDAASYFDIVDGAITDKLYQEASTVVYGGAPGTMGIPVLVTDQAKKDTILAYNKGQFVSEIANYLRLECIKTIPKKT*	hallmark_hmm	common_virus	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0009	shell	direct	high	767	0.999	GCA_003971345.1_00868
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	954411	954617	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	5847	6053	GCA_003971345_1_1_868	GCA_003971345_1_1_868	+	1832141	.	PDB:4AN5_F	Major-Capsid-protein	MYQDNTKENLVIGVRAEGAFNLDVLGYSYKDTAGANPNLAALGATANWEKYATSDKNTAGVILNIAEG*	hallmark_hmm	common_virus	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0010	shell	ambiguous	low	32	0.155	GCA_003971345.1_00868
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	954619	954870	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	6055	6306	GCA_003971345_1_1_869	GCA_003971345_1_1_869	+	1832141	.	.	hypothetical protein	MLVYSKQGKKVLGVDGEYRNPEYFEKTEQTDAVTVIGDYPHIELAYQAIGVNVIRLGVDDTPAIDDDSEQTKAKSRRTPKAVV*	.	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0011	shell	direct	high	251	0.996	GCA_003971345.1_00869
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	954938	955102	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	6374	6538	GCA_003971345_1_1_870	GCA_003971345_1_1_870	+	1832141	.	.	hypothetical protein	MSKTKKARIDAPAKNGFNYKPKFGLVIQCDDEAHQQTVFEQLKQLGYKAKVVVV*	.	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0012	shell	direct	high	164	0.994	GCA_003971345.1_00870
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	955099	956241	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	6535	7677	GCA_003971345_1_1_871	GCA_003971345_1_1_871	+	1832141	.	COG2401	ABC-type ATPase fused to a predicted acetyltransferase domain  [General function prediction only]. 	MIINIHHTCTDFDSYRAERVKSLFNVETGADVKITADLPIESEHWQDKDWQLGVIVGRSGTGKTSTGKQIWEGTPIYNPTWQTDQPIIDQIATNDSIDKATAYLSAVGLGTVPAWLRPYQVLSNGEQFRANLAKALADEPNRLIIDEFSSVVDRQIACIGASAFAKAWKRTKGKQAILLTCHYDVLDWLEPDWVYNTDTGEFTVNRGLLWRKPPIAFDIYQTNWRFWELFEPHHYLKMPKMIASTNYVAVVGGELVAHLAVSTLPGLIEARACRLVVMPEWQGAGIGMRFLNAVCQMWLEGNNRYNKSMRTIFHTSHPNLAQALRRDKKWTQISAKLQGGNKLRSQQTMVKASGKNAGSGYGGHFRAVQGFRYLGEDFDE*	mmseqs_cdd	nonviral_gene	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0013	shell	direct	high	1142	0.999	GCA_003971345.1_00871
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	956180	956767	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	7616	8203	GCA_003971345_1_1_872	GCA_003971345_1_1_872	+	1832141	.	cd08822	Formyl transferase catalytic core domain found in a group of proteins with unknown functions. Formyl transferase catalytic core domain found in a group of proteins with unknown functions.  Formyl transferase catalyzes the transfer of one-carbon groups, specifically the formyl- or hydroxymethyl- group.  This domain contains a Rossmann fold and it is the catalytic domain of the enzyme.	MADILGRYRAFAIWGKILMNKLKVMIVGQKWLAEQLLARCLKKPNIEVVTVSPPNNTDRLARLATIHQIPIVVHDKTLTANQVPTGVDIILTAHAYCFVQKKARDKARLGAVGYHPSLLPKYKGKNAIQLAFNNGDKVMGGSLYQLDDGWDTGAVLAQSSVTVDSGDTLAILWRDKLAPLGLDLFEQFLNSHLTV*	mmseqs_cdd	nonviral_gene	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0014	shell	direct	moderate	533	0.906	GCA_003971345.1_00872
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	956808	957164	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	8244	8600	GCA_003971345_1_1_873	GCA_003971345_1_1_873	+	1832141	.	CDD:cd08053	Head-Tail-Connector-Protein	MITLDDLTDIDKADEQTVVIVNAWLNKHKIRAFDKTPDPIRQAGRYIAKAWLDGDLFVARTEGVVTSKSSKAGDVSVSKTYADGADGQAMGQHEMIALALMQPYIKKSYGVNALVGRL*	hallmark_hmm	common_virus	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0015	shell	direct	high	356	0.997	GCA_003971345.1_00873
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	957161	957511	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	8597	8947	GCA_003971345_1_1_874	GCA_003971345_1_1_874	+	1832141	.	PFAM:PF12206.7	head-closure-Hc1	MRQEITADIANAFNTDLADAVKDFTAKRIILSDDDWAVNDTQVLSTINYSGRGVFTGFYAHEIDNKTIMQSDVKLICLQDELTEIPQIDDEINEMKIISISHDPAEVSFTIQLRGF*	phrogs_hmm	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0016	persistent	direct	high	350	0.997	GCA_003971345.1_00874
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	957511	957858	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	8947	9294	GCA_003971345_1_1_875	GCA_003971345_1_1_875	+	1832141	.	PFAM:PF04883.11	tail-component	MGIKWNKKLSIDPIADEIDKTYRKFTINCYNNVKTLSPVDTGRYRNAHHISVGAPSYSETGGGVELILGIPKHTYPIIYIQNNLPYALRLEHGWSQQAPTGVYGNAFNSALGALG*	hallmark_hmm	common_virus	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0017	persistent	direct	high	347	0.997	GCA_003971345.1_00875
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	957855	958055	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	9291	9491	GCA_003971345_1_1_876	GCA_003971345_1_1_876	-	1832141	.	PFAM:PF16777.4	transcriptional-regulator	MPKITSTPKTQTQIQKDSNARRGVKNKAFTLKLDDIELIKSLSKRLNIPQNQLIMDAVRAYQRQLD*	phrogs_hmm	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0018	shell	direct	high	200	0.995	GCA_003971345.1_00876
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	958191	958409	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	9627	9845	GCA_003971345_1_1_877	GCA_003971345_1_1_877	+	1832141	.	.	hypothetical protein	MAMMIAILMDAFIVLLLVVMVTMATILPIKQTLLDVLYYSLAYLKSQVIITVLYEIVMIIWLFYPILKKELL*	.	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0019	shell	direct	high	218	0.995	GCA_003971345.1_00877
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	958406	958909	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	9842	10345	GCA_003971345_1_1_878	GCA_003971345_1_1_878	+	1832141	.	COG3600	Uncharacterized phage-associated protein  [Mobilome: prophages, transposons]. 	MIKAPYNPIDVANYIVAEAIKREKPVTHLKLQKLLYYVVAKYAKTYNTILINEDIVKWQYGPVVKSVYHYFKLHGDRIITKPIAYLESAEIFNLKFTDVDVNNAQLGNDKRLVDTVGQVLNDTDLLTAYELVERTHKEPAWRNFEPEILQAKQELSYSMTELKVANI*	mmseqs_cdd	nonviral_gene	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0020	shell	direct	high	503	0.998	GCA_003971345.1_00878
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	958906	959787	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	10342	11223	GCA_003971345_1_1_879	GCA_003971345_1_1_879	+	1832141	.	.	hypothetical protein	MMIQISGDNAFIRAIIERYLQVQDTSPDKLDDLANEIVWLILEAFDNELRSSDAFNLPYKDITDSVFDSEKRLLTGSLTTFGENMETAIHHSFDKDKPNKHHEKKEKYVKRFMYIHGKIVEHILLAQVQKEFIQDSVRQAQETAKKAEAAAESAEEIAKIAKNNADKAKKTYNTMFANYVTILGIFTAIIVTIFGGLNVVDTVISYGNTHFSTIIFLAALVLMCVVCLLYFLAKIILKLNGKDDDNQRFTLECLFGAIFITCIGLIVFAWCVSPTKITPELDKTTDKIEQKSD*	.	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0021	shell	direct	high	878	0.995	GCA_003971345.1_00879
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	959855	960241	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	11291	11677	GCA_003971345_1_1_880	GCA_003971345_1_1_880	+	1832141	.	PDB:2L25_A	tail-completion-protein	MNSFHIEQTILGHIKAWEHFDDVPLAKENRNFKPPDGIWGRVTILGGVNQVRSISNTPNILQQGTLVIQLFCPQDLGTVKIKIWSDSLAQHLKAKQLGRLELLAPSIINVPSNDGIYQINVSVPYRYY*	hallmark_hmm	common_virus	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0022	shell	direct	high	386	0.997	GCA_003971345.1_00880
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	960250	960663	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	11686	12099	GCA_003971345_1_1_881	GCA_003971345_1_1_881	+	1832141	.	6E3C_C	Dec protein	MKLITASVLTALLTSFVATRTVQATPLNRQEYNDLRGWQVPDNENPNDNGYLVVNAGVSERNVDGFDGYVSWLPKLAFEEQYKNDNLTFGQAVELLKGGKKSLVKVGMARVCICCLLPTLILRLRLICQICRMKMAN*	hhsuite_tools	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0023	cloud	direct	high	413	0.998	GCA_003971345.1_00881
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	960639	960767	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	12075	12203	GCA_003971345_1_1_882	GCA_003971345_1_1_882	+	1832141	.	pfam11195	Protein of unknown function (DUF2829). This is a uncharacterized family of proteins found in bacteria and bacteriphages.	MQNENGELTVPSITMKTADNKFAVGWLASQTDMLAEDWVVVQ*	mmseqs_cdd	common_virus	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0024	cloud	ambiguous	low	26	0.202	GCA_003971345.1_00881
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	960802	961710	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	12238	13146	GCA_003971345_1_1_883	GCA_003971345_1_1_883	+	1832141	.	PDB:5NGJ_B	Tail-tube-protein	MSSGAFVKTAYAKQTGETLPKTGWKTLPNISNGLTVATELTNSEMLSGSRMAKAGMVTSASVQGDIETELMFGAYDELLAAAFWSEWSAGASPNTLSVGATKHQFAIAKDFSDINVNHVFTGCVVSSFGLSVDTSSPIKLKFGMTGLGYQESKTESFTKTPTAQADTAKASGLSIGEIKVNGTKLDVCVESFSFELDNQTEVQKCLGDNIYGGNILAMLTNITGSMTIAYSQKAHEMISNQMTGATLSLELPIKFGNSKYVIKIPKFQVSGEIPSPSGTDLVTVDLSYTVVDESPVIEKHTA*	hallmark_hmm	common_virus	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0025	shell	direct	high	908	0.999	GCA_003971345.1_00882
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	961794	961940	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	13230	13376	GCA_003971345_1_1_884	GCA_003971345_1_1_884	+	1832141	.	.	hypothetical protein	MEYITIIVDFMKYLIEKHGLFVIWLMVASLITLYKLDMILTAVHLFFN*	.	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0026	shell	direct	high	146	0.993	GCA_003971345.1_00883
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	961991	962452	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	13427	13888	GCA_003971345_1_1_885	GCA_003971345_1_1_885	+	1832141	.	PFAM:PF08809.10	Tail-assembly-chaperone	MAFDLTLLKKDAKMSAKREIEFDGLELTLEIQASEAFKRAAAEVQKIANTPKKVTKDSLKRDSQDEIGEYEAMLFILGEYCISQWNVTADGEPLAINGDNFLILLDQGFEKDKLTQFITLLFETYASLSQEFEDNKAKLVKKSMTATNGKKSG*	phrogs_hmm	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0027	shell	direct	high	461	0.998	GCA_003971345.1_00884
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	962754	964364	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	14190	15800	GCA_003971345_1_1_886	GCA_003971345_1_1_886	+	1832141	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MSNTYRLDIQVNADSANTALGNLKEHFDKIEQSSGKASVGIDGFSDKADKASKSSKKAGDEAKKAGDGAKKFGDDAKKAGNDVDGLKRKTDGLKTAFGTLKGVMFTAFAVAGVGGIIATADQMQNLASQIRLATDSTEQFHAVQTKLRAIANEQRSSFDAVVDLYSNSQRSLSALGKSQQDVINFTRNMTMAMNVGGRSAQAQAAALTQLGQALASGVLRGDEFNSVAEQAPILMDLIAKEMGVTSNAIRDLAKDGKITADVVYNAVAKATDSLSAMSAKMPTTVSQALQVIKNEYNYLIDDIMNQNSMMSQNIANAALWVAEHFRTLVSAAAMVGAVWLGIIAKNSALVTSFVTLTGATVASTKASIANAFSVQGQITAYQVLELKILSLSTGLGFKIVKTIQATTNAVAYARSLVGLAKSFNTATAAARLHTLALAGVTTAKRSAMGVGILATRAITGLGGAFMSLGRIITAHPIIAIGAVLASVVVSTHGVTGAINSLSDAFGVVTLMAKDFIVFVGDGFSMAWDTVRLWIRS*	hallmark_hmm	common_virus	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0028	shell	direct	high	1610	0.999	GCA_003971345.1_00885
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	964331	964555	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	15767	15991	GCA_003971345_1_1_887	GCA_003971345_1_1_887	+	1832141	.	.	hypothetical protein	MGYCQALDKKLDGMQNGNAGQVINVHVTVNSDGSNVQADTQMGKTMGEAMAKIARQVVIQESKQNGHLDRLYRR*	.	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0029	shell	ambiguous	low	35	0.156	GCA_003971345.1_00885
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	964627	965025	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	16063	16461	GCA_003971345_1_1_888	GCA_003971345_1_1_888	+	1832141	.	PFAM:PF05939.12	minor-tail-protein	MGDFITFLTYIESEKLNLREKTMKTFNWDISADSSETTDLNTTITAFGDGYEQAVSFGINNRRKSWQCSKTDTKAVIDEILSFLLNTKGVEPFTFAPIKGEPAIKVRLDGEISRQKTGGDVWQIGFTLKQVF*	hallmark_hmm	common_virus	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0030	shell	direct	high	398	0.997	GCA_003971345.1_00886
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	965132	965524	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	16568	16960	GCA_003971345_1_1_889	GCA_003971345_1_1_889	+	1832141	.	.	hypothetical protein	MSETTLTELSRTEATVLQSFIAQVDFWKNQHGDKAATIEVIYYPEDDGFEVSNNEPNNGVLKRNRTTAFRADLLAWASNQLRQLQGWDNSQTVTAFILSFKDNRYGVRAALASEATDKADDGAEQAEQDK*	.	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0031	persistent	direct	high	392	0.997	GCA_003971345.1_00887
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	965627	966292	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	17063	17728	GCA_003971345_1_1_890	GCA_003971345_1_1_890	+	1832141	.	PFAM:PF05100.11	minor-tail-protein-	MSFNTDIQQTTVQGFITLYELDARKLGGEIYRFHGHNDGVIRWQGQDFHPIAIKADGLEMRSDGRASTPTLIIHNDIGGIPQALRFLCLKFGDFVGAKLKVIHTLAEYLTSADEQNFKIQNWYIEQKTSQTNVTTTFELSNPVDFEGQKIPVRQITSYCHWAVCGRYRGEECGYIGTNRFTTDGKPTDNPALDRCGGRMTECKLRDNEQRFGGFPAAGLVG*	hallmark_hmm	common_virus	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0032	shell	direct	high	665	0.998	GCA_003971345.1_00888
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	966289	966492	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	17725	17928	GCA_003971345_1_1_891	GCA_003971345_1_1_891	-	1832141	.	.	hypothetical protein	MADKASPQARKKATANYFDKSLARIGLVISHTEPHVLDALNQIMAHKDCSKAMAIKIALVEYAKTLD*	.	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0033	shell	direct	high	203	0.995	GCA_003971345.1_00889
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	966639	966761	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	18075	18197	GCA_003971345_1_1_892	GCA_003971345_1_1_892	+	1832141	.	.	hypothetical protein	MIVSLSIAFPPYVTARLVLAQSTPLVLMKCIVLQYTNKVN*	.	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0034	shell	direct	high	122	0.992	GCA_003971345.1_00890
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	966875	967669	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	18311	19105	GCA_003971345_1_1_893	GCA_003971345_1_1_893	+	1832141	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MRLTKNLQQQIITHAQDVYPNECCGVIIDGQYHPCTNIAPNPANAFEIDTAEWVVLSNRGDIEAIVHSHPNGEPLPSEVDKVQMGLHDIDWVIVGLGHTPTGATYCDIKRHKPTTYQSPLLGREYYHGVQDCYSLVQDYYSRELDITLPSFARSDDWWENPNHEPLYENNFTKAGFIKVQDKNDLQKHDVILCRVGRTHHVNHALIWLGDDGALTSEKTPDCVGNALILHHPHGRLSTREIYGKGWADRTAMVVRHQASNQTNL*	mmseqs_cdd	common_virus	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0035	shell	direct	high	794	0.999	GCA_003971345.1_00891
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	967798	968061	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	19234	19497	GCA_003971345_1_1_894	GCA_003971345_1_1_894	-	1832141	.	COG1598	Predicted nuclease of the RNAse H fold, HicB family [Defense mechanisms]. 	MHYPVTLTPDTDGFCVTFRDIPEAISQGDTTDEALDMAQDALMVAMEFYFEDNRAVPMPSQAQDGEHLVSLPPSVWVKVLLLNEMIA*	mmseqs_cdd	nonviral_gene	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0036	shell	direct	high	263	0.996	GCA_003971345.1_00892
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	968077	968283	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	19513	19719	GCA_003971345_1_1_895	GCA_003971345_1_1_895	+	1832141	.	.	hypothetical protein	MVKAITPDEIRAAGEQFKSHPENNAPATADKLIANKSGFVLSERSFKNLQMIIAPLPKQWHRQAASWA*	.	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0037	.	unmatched_CDS	none	0	0	.
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	968253	968372	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	19689	19808	GCA_003971345_1_1_896	GCA_003971345_1_1_896	+	1832141	.	PDB:2MXZ_A	L-alanyl-D-glutamate-peptidase-endolysin	MAQASGKLGVNVRWGGAWMVITGKAGTPQEWVKAYRAGG*	common_virus_hmm	common_virus	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0038	.	unmatched_CDS	none	0	0	.
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	968697	969797	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	20133	21233	GCA_003971345_1_1_897	GCA_003971345_1_1_897	-	1832141	.	COG0842	ABC-type multidrug transport system, permease component [Defense mechanisms]. 	MRRFIKQYLTIWLNVIKDRSIFLTMVLSVVFYGFFYPFAYQAQRPADLPIVIVDEEQSPLTQAIIHTTSHTPNIHVLAVVSDFRQAQMLVQSAKADGILLLPDNLSQSIHHGQTGGVGLYLSSAYFLRTQNIGAGLVSSLQATIIQELGQVTQTRHKPMPELIHQSALFNPLSGYGSYIFPAVAPIIVYQTIVLGLAMLVAGYRQRLWRASACDFLAIYAVALTIGCLSCFYLFGFVFWWHDYPRGGNFWGMMLGVPIFVSCAIGVALLIASWVADGAKVGVLLIFSSVPLFMLTGLAYPLMAMPKFLQPLAHALPTTQGVQMFIQLNQMGVSIQDVWQKMAYLASVAVLCLGVAFWRLRLVNKSV*	mmseqs_cdd	nonviral_gene	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0039	persistent	direct	high	1100	0.999	GCA_003971345.1_00893
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	969797	970975	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	21233	22411	GCA_003971345_1_1_898	GCA_003971345_1_1_898	-	1832141	.	PF12698.7	ABC-2 family transporter protein	MIVRFIRAFCQAFLRELNRLSCNRFDLAMVMIAPLVIIVLFGAMFYHGKAHHLPVALVDEDNSELSHLIYQHIHHNETIKTVLILDNVQDAHHAINRLDVGGYIHIPKDAQNHLVRGENTGIHIAYNQSFFSIGSAISSALSKSTKGGIAKFIQTKHLTGVLPHLSGNMPHVKISVLFNPNLSYEFFLEPFLVAAVLHLLLCCLVAHAIGQEFHEHSVHEWLCHSPFGALFGKISVYVLIISLWHGLWQAWLIGVRGWFVAGSLFVLIIGQLLFYLAYALFGAMVVLKTQNINKSYGILAVYGGSSMSFAGVTLPLNNAPSFTQFWSQIIPFTPFARLQVEQWVIGSPFIITLAHLNSLLIFVLIFAIGSLLLLRRINKTLIAMPNTPKDDS*	hhsuite_tools	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0040	persistent	direct	high	1178	0.999	GCA_003971345.1_00894
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	971003	972166	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	22439	23602	GCA_003971345_1_1_899	GCA_003971345_1_1_899	-	1832141	.	COG1566	Multidrug resistance efflux pump [Defense mechanisms]. 	MTDKTDDVKPDTDGNHPKKQKPHTQAKSKPRPLALFLLLALIGSVLLVIIFGLIQSYGTPQNLPTANAIGSTNEPPKGVIAHLRQKITGPATFSIQGRVEGETVNISTKLPSRVAAIYVKEGQAVRAGEPLVQLISPEIDAKKQQAAAMLQSALAFQSSTDRGTRQENVDTLYANWQSAKAQATLAEESYRRGEYLYQEGVISRQRRDEMRAAKQSSAQIAQAAQQQYLKAERGRTDELKSSADAQVQIARAAVAEADALDAETMLYAPIDGTVSKIYIQSSELVMPAVPVMSLLDNHPTITISVQENQYSHVHALPKLTGFIPALNKTADFKIVHTDDEGEFATIKNTRQTGGYDIHSFKTKLEPITPIEGLKVGMSVIFDITVLP*	mmseqs_cdd	nonviral_gene	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0041	persistent	direct	high	1163	0.999	GCA_003971345.1_00895
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	972213	973709	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	23649	25145	GCA_003971345_1_1_900	GCA_003971345_1_1_900	-	1832141	.	6U94_A	RND efflux system, outer membrane	MSIKCQLVAIDNIIKPCYDKILNFVYFSTMKMPYFLLLGLLLAQQADADYSLLDAQKQLMSSSPAIQASHALYQADVLQAESLQKLHYPRISLNAHAFVLQQNSSIPLDHIKEQTAQHINTHFDHRFGSAPDGLLDALHDSTQTALDRLPDHQDVKLRHDGITPNITATMPIYTGGLISSSKNIANLQAQRGKFGLQERISLAKLNLIRHYFNVQLQKQLTDTQQNMLSAMQLHVDNAYKLEQQGFISRGQRMQFEVARNRVQRLYQSTQNQHQNSIYELAVLLGLPHIEPLSTPLFINTQHRPNWQALLKDSQNTPLNQKLKTDILLADENIALRQSTKKPKIAAVARYTLDDKPDWFAGVAVSYNLFLGIDRDKQIEAAHLQKQAAQLGHEQVNEHITTTMHTAYGEMVLAQKTHALLQQNRQAAKENLRIQTLSFQEGFGTVAGVVDAQSALSQIDSETALNAYRYLLALATLLHYTGTIDDFDDYLSLDDAHKL*	hhsuite_tools	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0042	persistent	direct	high	1496	0.999	GCA_003971345.1_00896
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	973971	978143	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	25407	29579	GCA_003971345_1_1_901	GCA_003971345_1_1_901	-	1832141	.	PDB:5XDR_A	Replicative-polyprotein	MHSTDNLPVLAKDRHYLNKLKQKMNSTTGDLKTKCKIRYDAIYERSAEQVANRMDSIPKNLSEKLNHDLPVTAEADTLIQAIRDHQVVIIAGETGSGKTTQLPKLAMMAGRGITGQIGHTQPRRLAARSVAMRIAEELGEPLGQTVSFKIRFTEEGGKHSIVKLMTDGILLAELGSDKFLANYDTIIIDEAHERSLNIDFIMGYLKRLLPKRPDLKVIITSATLDTQRFSDYFAANGKPAPVYIVEGRSYPVEVRYHPLTDTIVSSQDDDAFDDIEDNLPRALTAAVNECFEDARTKGHPDQADILIFAATEAEIRELQEVLMLYEPAHTEILPLFARQSYGEQQKIFAPSGKGRRIIIATNVAETALTVPNIRYVIDLGFARISRYNYRSRIQRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFNSRPEFTEPEILRTNLASVILQMERLQLGDVNAFDFITPPDLRLVNDGRKLLIELGALDDKSFTKTRAKKGRTQLSSLTKIGQQMAKMPIDPRLARMLVAGDAFDCLADILIIVSALAVQDVRERPINKHAQADQKHALFRKEDSDFLFYLELFAALFDQHSTNDNQALSSNARRNFAKKHYLSYARIREWQKTHRQLSEMMAEMGFEINKQKNHQNDVKIDTKKGVRLSLKSGTSHQKSIKQALVGAKALKNDIDNKTSIHYANIHRALLSALLSFVAHKTDTVGEYLMARSQKARIFPASTLHKKGAQWVMAFEVVETSQVYMRTLAKIEPEWIIKAAPNLLKYHYFEPHWSKKAGRVRAYAQISLFGLIVIAKELVNFEQIDLVQAREIFIRDALVANQYGMQMKFLADNANKIKDIERIEDKLRRRDLLVDEESLYQFYDAKIPNHIASRKSFEEFYHDAENKTPNFLHFSDEDVLNEAVDDSREFPESWHLGGVRLPLSYVFDPAADNDGVTVHVPIKALAQVDPVALLWGISGWRYELVLQLLKTLPKEIRRQIVPIPDTCQKIFHQLDASSKMGLLDQLVAALKTLGVQAHAQDFAPDKVEDYLRPLICVVDDKNRVIEKSRDLPKLQARHRKASVQSIAIEQGVHHHFPNHFNFVKNKHTSGIVMQEFSALKADAAQSAVFIATFTEMNAALAEHKKGVLTLIKGHLGAKQKQLTGQIDKAFKLAFAPLGDLEKLKNIVVHATLEACLYDYGPDFDHKPVSQHGDHARAAIAGLITQNNQWLISHLPLDEREFDDCQDLILKNFLLVGQEILRNLKEIYTAWQTARGKLLMLDQEIFGENIEDIEDQLDDLQLANFVYQTDYRHWRQYPRYLQALNIRLDRLQHNLEADLDAVYLLDTHMERLARCVKNPKFAEYRWLVEEYRINLFAQPMKTVQPVSAKRLETLWANLTTQ*	common_virus_hmm	common_virus	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0043	persistent	direct	high	4172	1.0	GCA_003971345.1_00897
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	978420	979109	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	29856	30545	GCA_003971345_1_1_902	GCA_003971345_1_1_902	+	1832141	.	TIGR02796	TolQ protein. TolQ is one of the essential components of the Tol-Pal system. Together with TolR, it harnesses protonmotive force to energize TolA, which spans the periplasm to reach the complex of TolB and Pal at the outer member. The tol-pal system proves to be important for maintaining outer membrane integrity. Gene pairs similar to the TolQ and TolR gene pair often number several per genome, but this model describes specificially TolQ per se, as found in tol-pal operons. A close homolog, excluded from this model, is ExbB of the ExbB/ExbD/TonB protein complex, which powers transport of siderophores and vitamin B12 across the bacterial outer membrane. The Tol-Pal system is exploited by colicin and filamentous phage DNA to enter the cell. It is also implicated in pathogenesis in several bacterial species [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MNESISLISLVIEASVVVKLVMAILLLLSTISWVLIFHLGTKIGGIAKFDKRFERWFWTDDIDHQLSVVQAESERAGLELIFYTGFYDQNHQDQDSSLSDDKKVQIVERRLRMALGSEQVHLEKGLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQAESVGLATVAPSIAEALIATALGLFAAIPATMAYNHFATKSNTLYENRSLFCEGLISALVTNLAKKNTASTL*	mmseqs_cdd	nonviral_gene	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0044	persistent	direct	high	689	0.999	GCA_003971345.1_00898
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	979135	979569	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	30571	31005	GCA_003971345_1_1_903	GCA_003971345_1_1_903	+	1832141	.	TIGR02801	TolR protein. The model describes the inner membrane protein TolR, part of the TolR/TolQ complex that transduces energy from the proton-motive force, through TolA, to an outer membrane complex made up of TolB and Pal (peptidoglycan-associated lipoprotein). The complex is required to maintain outer membrane integrity, and defects may cause a defect in the import of some organic compounds in addition to the resulting morphologic. While several gene pairs homologous to talR and tolQ may be found in a single genome, but the scope of this model is set to favor finding only bone fide TolR, supported by operon structure as well as by score. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MVTSNRFARRQRPLNSDMNVVPYIDVMLVLLVIFIVTAPMLATGIEVSLPKEQTKPITQADKLPVIVSIQADGNLYVSHKNAIDVPITPDKLDTLLRQMHQDNTDLQVMVNADADNAYSRIMQIMALIQNVGITQVSLLSESVQ*	mmseqs_cdd	nonviral_gene	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0045	persistent	direct	high	434	0.998	GCA_003971345.1_00899
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	979600	980400	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	31036	31836	GCA_003971345_1_1_904	GCA_003971345_1_1_904	+	1832141	.	4G7X_B	Putative uncharacterized protein, TolA protein	MRLSDNHPTVNFDKSALILPILASVLLHTVIIIAVAAPLITPPTKPNTTIQTALVGQEAFNRAKTALSNHHANQNKPTATNTSSTITANDNDNAFMQAQNQHRYHPQVSTSATTTQAYHPPPNSAPFESNSPNIQNQPTNAHAKLAEYSNHVSDLEQSNHTESTPSRAQINAAITSVKHRIEAIWQRYPKQPNQTITFQVNMNQQGDVTSIQFGGGHPDLRESVEAAVYAAAPFYELGGMRDSIRLQFTTEQLIMDNNQTTNEPNH*	hhsuite_tools	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0046	persistent	direct	high	800	0.999	GCA_003971345.1_00900
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	980417	981679	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	31853	33115	GCA_003971345_1_1_905	GCA_003971345_1_1_905	+	1832141	.	TIGR02800	tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MKSPITKVCLALTISFSAALTHTYADDELIVISEQVAPSQYPVAVMPFSEAHQMSHYLSLAGLGTTHQNLPQHTQTNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEIIDTANGLVSVKHTQISDNHPASIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNKISSLKLIDPSGQLIRTLDTVNGSIITPTFSPDGLSIAYSVQTKNNLPIIYIVSVSGGTPKLVTPFWGHNLAPSFSPDGGSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPNYLADASGFIYTADKGTRRQSLYRYDFGTTHSTQIASYATNPRLSPDGSKLVYLSGGQIIIANTKGRIQQSFRVLGTDVSASFSPSGTRIIYTSNQGNKNQLMIRSLSSNAIRTIPTSGTVRDPIWSK*	mmseqs_cdd	nonviral_gene	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0047	persistent	direct	high	1262	0.999	GCA_003971345.1_00901
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	981945	985499	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	33381	36935	GCA_003971345_1_1_906	GCA_003971345_1_1_906	-	1832141	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MIDTFKPKLDLPTKANFKTTLPLLGGADLSFWLALAAKSEERLIVMIANHQNELNQLDTELSFFGIDAHVFPDWEILAYDQLSVHQDIISERIALLTRMPTTGVLLVSTQTLMQRIAPPSWLIGQHFDLAVGDKFDIHEQRLRLTKAGYVQTENVFEPGEFAVRGSIVDIFAVGQSLPFRLDLFDDNIETIKFFDPDSQRTLSDNDLAQLKKDAQAGMNTHHAQKLPSSAKITEFRLLPAREFPLEEGKEMFRQNFASLFPNASARKIEFYNDVMAAIAPQGIEFYAPLFFELDAWMKTGNLFSYLPDDTLVVSHDNLSACHDEYYQQIQARHHSRAHDKSLPIMPPDYLFLANNEFHQVLKAYPRVVINTNHDTAKIGAMESLPPPILPINHQAAKPLSELLSFIKSGQVPILLVAESAGRREIILELLKDKVAVKVVDNYQEFINNLDDFNTDCIALSVAPIERGLWLRDETGGLCIISETQIFGRQVLQTRRRRQSSVSQAFLIKSVTELTEGALVVHLEHGIGRYQGLVVLDVGEGEQEFIHLKYADDASIYVPITNLALIGRYSGSDLQTVSLSKIGSGKWEKAKLKALEQIHDVAAELLNVQARRNAKSGISFDIDMSQYELFASQFAFEETIDQAEAIHAVMHDMKQNKPMDRLICGDVGFGKTEVAMRAAFIAVQAGYQVAVLVPTTLLAGQHEDSFLNRFADWPIKIESLSRFGNKKHQDAILAGLADGTVDIVIGTHKLIQDDVKFKQLGLMIIDEEHRFGVRHKERIKALQTNIDSLSMTATPIPRTLNMALSGMQDISIIATPPARRLAIKTFLLPKSDETIKEAILREILRGGQVYYLHNDVASIEAAADTLRELVGEARVAVAHGQMNERELSVVMNDFYHKKFNVLVASTIIETGIDVPNANTIIIHRADKFGIAQLHQLRGRVGRSHHQAYCYLMVPSLKGLSSDAKKRLNAITRANTLGAGFMLASEDLEIRGAGEILGKEQSGNMQTIGFGLYMDMLERATNAIKQGKTPSLATPLDLVSDIDIHASALIPDEYLGDVHERLVFYKRISSLDDVNQLIDIRTEMIDRFGTLPTQTQNLFAVHRIRIRAKALGITKIDATQTTISIEFRADTPIDGLAIIKLIQSNDGYRMNGATAIRYTSQELMDTQARIDKVNELLLYFESTKTA*	common_virus_hmm	common_virus	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0048	persistent	direct	high	3554	1.0	GCA_003971345.1_00902
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	985504	986166	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	36940	37602	GCA_003971345_1_1_907	GCA_003971345_1_1_907	-	1832141	.	PRK00043	thiamine phosphate synthase. 	MTLQSIDKVPKLYLLTNDDELTTLLDKLERVFDTGAVSLLQVRRKSTLKLYDLATVYREAEMIVSLANDYDIKVVMNDSLELASHFGTGLHLGQRDGSVRVAREILGDHVVIGRTCHTDLALFKEAKREGATYGAMGTAFASITKPRAKIISKDILKKACELDFPLCVIGGITLENIHQLRDKLNGAAIDYIAVTADIMGHSVDTIADKCLAWQQKLNTW*	mmseqs_cdd	nonviral_gene	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0049	persistent	direct	high	662	0.998	GCA_003971345.1_00903
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	986320	986757	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	37756	38193	GCA_003971345_1_1_908	GCA_003971345_1_1_908	-	1832141	.	6AF2_A	HIT domain-containing protein	MFQLHPTLAKDTFLVGDFPLSTVRLMNDCQFPWLILVPRVSGIKEIYELSAADQVQFLRESSWVSSQMAKIFGADKMNVAALGNQVLQLHFHHIVRYQNDAAWPNPVWGHEAMPYTQEVLSHMQQTLMMALRGHHQMPFDWKMDV*	hhsuite_tools	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0050	persistent	direct	high	437	0.998	GCA_003971345.1_00904
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	987333	987530	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	38769	38966	GCA_003971345_1_1_909	GCA_003971345_1_1_909	+	1832141	.	PFAM:PF16777.4	transcriptional-regulator	MPKIVANPKTRAQIQKDSDARRGVKPIGFKVPIEFAELLDELAKQSGKTKNIIIMEAVELWAKQL*	phrogs_hmm	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0051	persistent	direct	high	197	0.995	GCA_003971345.1_00905
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	987795	988199	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	39231	39635	GCA_003971345_1_1_910	GCA_003971345_1_1_910	+	1832141	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MLYPIAILKGGDKTAHGIFFPDVPNLASACDELQDIHKMALECLDVHFSGLVADGEEIPLPTNFDAHTQNSQFDGMMWAWVDVDLSKYDVKSHKINITLPNHLIAKIDGKVTAHKSLYKSRSNYLAQLAMADLA*	mmseqs_cdd	nonviral_gene	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0052	shell	direct	high	404	0.998	GCA_003971345.1_00906
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	988605	988820	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	40041	40256	GCA_003971345_1_1_911	GCA_003971345_1_1_911	+	1832141	.	.	hypothetical protein	MTDSTTSPARQKATNTYRQKALANIALVISHTEPHALDALNQIMAHKDCSKAMAIKVALVEYANTLSQTSR*	.	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0053	shell	direct	high	215	0.995	GCA_003971345.1_00907
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	988936	989481	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	40372	40917	GCA_003971345_1_1_912	GCA_003971345_1_1_912	-	1832141	.	COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ribosomal structure and biogenesis]. 	MSQFSDALIHIVLFSPKIPNNTGSIIRLCANTGAQLHLVKPLGFELDDTRLKRAGLDYHEYATLSVHDNWQETKSALKSLGVERIVAMTTKFSRPFYEYQFKLDNDQHKVALVFGSETDGLPEEVRADIGANHWLRLPMLPDSRSLNLANSVGICLYEVWRQLGFVGDIGQSVGYHKPTSR*	mmseqs_cdd	nonviral_gene	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0054	persistent	direct	high	545	0.998	GCA_003971345.1_00908
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	989729	989869	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	41165	41305	GCA_003971345_1_1_913	GCA_003971345_1_1_913	+	1832141	.	COG5510	Predicted small secreted protein  [Function unknown]. 	MKKVLVASIAAVVVLTGCNAIKGFGKDVSKAGEAVSDTAQKVEKKI*	mmseqs_cdd	nonviral_gene	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0055	persistent	direct	high	140	0.993	GCA_003971345.1_00909
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	989951	991126	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	41387	42562	GCA_003971345_1_1_914	GCA_003971345_1_1_914	-	1832141	.	COG0635	Coproporphyrinogen III oxidase or related Fe-S oxidoreductase [Coenzyme transport and metabolism]. 	MYPDLLDPAHIPLSLYIHIPWCVKKCPYCDFNSHALPSQVPFENYIEALLSDAVSQQSLVSNRQIDTVFIGGGTPSLLPIESFKRLFDGLRLIYDFAPTCEITLEANPGTLEHSPFDEYLTIGINRLSIGVQSFDHNALTVLGRIHNPDQASNAIRAARIAGFDRVNADLMYGLPNQNPSKAVNDIQTAIDAGATHLSWYQLTIEPNTTFYCTPPQLPDEEIMAEIETLGQSVLTKHGFYNYEVSAWHGPNDAPCQHNLNYWQFGDYLAIGAGAHGKLTLKNHPDYQDGIYRYQKSRQPKDYLAFEDAPKMVNFERISDDNLPFEFMMNALRLKDGVSTDVFETRTGLLISTIDNEMLPLQHQGLMVLDPLRIAPTRLGFRYVNYLVSQFI*	mmseqs_cdd	nonviral_gene	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0056	persistent	direct	high	1175	0.999	GCA_003971345.1_00910
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	991140	992315	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	42576	43751	GCA_003971345_1_1_915	GCA_003971345_1_1_915	-	1832141	.	PDB:1OYW_A	ATP-dependent-DNA-helicase	MTETTVKNFDDLPLSEPILKAVQALKFDQLTPIQAQILPHTLANQDAIGQAQTGTGKTATFLITIIESLLKRPFQADEIRYLGEPRALVLAPTRELAQQILADCRELTRFSQLYNLCITGGSDFDKQLEQLHKRPLDILIGTPGRIIDWVNKGELFLDRVEVFVLDEADRMLDMGFIPDIKRIVRHMPSNTERQSLLFSATFNQDVMNLAYRWLHQPAFVEIAPESKTNQAIDQQFYLVTEREKTSALKQILADDSVKKTIIFANRKDQVKRLYDYLRRHHKVTMLSGDVAQQKRERYLQRFKDGEVNVLVATDVAGRGIHVDDVTHVINYTLPDMPDDYVHRIGRTGRAGLSGVSISFVSENDAFNLPALERHIDQKFKLNQFEFLDEHK*	common_virus_hmm	common_virus	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0057	persistent	direct	high	1175	0.999	GCA_003971345.1_00911
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	992346	992786	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	43782	44222	GCA_003971345_1_1_916	GCA_003971345_1_1_916	-	1832141	.	.	hypothetical protein	MMMKNKWMRGLAILVLSLPTVTYAKTAAPKASEAPEVSLTQEEQMAIDFCDFSAYGVMHIAGDHQGGATKSEALTNHDKRMAELKDLIDLDPETATMLDKYWKGAIDRIFQESVQKTDAEKQAFVMGVGESSFYSCLDQVLKTPKN*	.	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0058	persistent	direct	high	440	0.998	GCA_003971345.1_00912
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	993136	994014	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	44572	45450	GCA_003971345_1_1_917	GCA_003971345_1_1_917	+	1832141	.	TIGR02139	sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]	MLNQPIPLKNRARRVMPFFGLSMGISIFALGLLVILPFLMMILTTLQMSFDDIMQTIREPQVFAAIKLSLSMAMLATLTNLIFGTLAAWVLVRYEFWGKSFLNALVDLPFALPTAVTGIALATLYAPNGLFGQWFTHLGILLFNEPIKIAFTPIGIWLALVVVSFPFIVRAVQPVLAELSVEFEEAAAVMGAGRLTTFCRVILPEISPAMLIGAGMMFARATGEYGSVIFIAGNIPMQSEILPLIIVSKLEQFDVAGAACVSLFMLLISLVFLFTMNFIQWKLSARLGAKTN*	mmseqs_cdd	nonviral_gene	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0059	persistent	direct	high	878	0.999	GCA_003971345.1_00913
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	994059	994898	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	45495	46334	GCA_003971345_1_1_918	GCA_003971345_1_1_918	+	1832141	.	COG4208	ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]. 	MSHTSSYSYQKNPATRDKPWVRWSLIGIAVVFMGVMLVVPLVSVFYEALKEGWQAYQAALLEPDALASIKLTLITAAIILPINTIIGVALAYLITRHQFRGKFVITTLLDLPFAVSPVVAGLMFVLVFGANTRLGGYLESMGIQVIFATTGIVLATLFVTFAFIARELIPLMQAQGDSEEQAALTLGANGWQMFWKVTLPNIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTVPLMIEIAYNEYAFTLAFALSSLLALLALITLVAQGLMSHKK*	mmseqs_cdd	nonviral_gene	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0060	persistent	direct	high	839	0.999	GCA_003971345.1_00914
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	994991	995710	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	46427	47146	GCA_003971345_1_1_919	GCA_003971345_1_1_919	+	1832141	.	COG1118	ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]. 	MSIKIQNIHKTFGDFVALGEISIDISTGELTTLLGPSGCGKTTLLRIIAGLENADNGRIYFDSIDVTDIPVQHRGIGFVFQQYALFRHQTVAQNIAFGLTLLPRNTRPSANTIDRRVDELLDLVQLSHTKTRYPHELSGGQRQRVALARALATEPKLLLLDEPFGALDAKVRKSLRDSLKDIQREIGITSILVTHDQEEAQAISDKIVIMNYGQIEQIGTPSKLFAQPSSDFVVDFLGL*	mmseqs_cdd	nonviral_gene	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0061	persistent	direct	high	719	0.999	GCA_003971345.1_00915
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	995752	997170	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	47188	48606	GCA_003971345_1_1_920	GCA_003971345_1_1_920	-	1832141	.	PDB:3BH0_A	Helicase-ATPase	MAKAKSSYICQNCGAIYGKWAGQCTDCGEWNTLVEAPNTSLPHHHKSKTTTAPRKTANYAGAVSAVMTLDHVGVTLETRMPTGIGEFDRVLGGGLVAGSVVLIGGDPGIGKSTILLQTAINMAAGDSLSGSALYITGEESLSQVAMRAVRLGLPTDRLRVLAETNVDTICAALTTEQPAIAVIDSIQTLFTEAIQSAPGGVAQIRESAAVLTRYAKQTGTALFLVGHVTKEGALAGPRVLEHMVDTVLYFEGESDSRFRMIRAIKNRFGAVNELGIFGMTDTGLKEVANPSAIFLSRYDKPIAGSVVMVSREGTRPLLVEVQALVDDSQGQPRRMALGLDYQRLSMLLAVMHRHGGIHTSGMDVYVNVVGGVKVMETGSDLAVLIACASSIKEKPLPVRLCVFGEVGLSGEIRPVPNGQERLKEAMKHGFTHAIVPRANAPAANHPQFKNIQIIAVDRLDEAIYQAFEINAG*	rep_hall_hmm	common_virus	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0062	persistent	direct	high	1418	0.999	GCA_003971345.1_00916
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	997468	999300	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	48904	50736	GCA_003971345_1_1_921	GCA_003971345_1_1_921	+	1832141	.	COG1274	Phosphoenolpyruvate carboxykinase, GTP-dependent [Energy production and conversion]. 	MTAKITAPDFVRHQALIHWVAEIAALTKPAAIEWCDGSEEENQRLIDLMIKNGTMIKLNEDKHPNSYLAFSDPTDVARVEDRTYICSKEEIDAGATNNWVEPSQMRTKLNDLFDGCMAGRTMYVVPFSMGPLGSHIAHIGIEITDSPYVVVSMRKMARMGKEVYDVLGADGEYVPCVHTVGSPLTEGQKDVAWPCNDDKYIVHFPETREIWSYGSGYGGNALLGKKCLALRIASAMGREQGWLAEHMLILGVTNPQGKKHYIAAAFPSACGKTNFAMLIPPAGYEGWKVETVGDDIAWIKPSEDGKLYAINPEAGFFGVAPGTNTKTNSNCMSTLGSDVIYTNVAVTDDGEVWWEGKTKETPANLTNWKREPHTGAERAAHANARFTVSAKQCPSIDPQWENPEGVPISAFIFGGRRADTVPLVSEAFDWVDGVYKAATMGSETTAAATGQQGVVRRDPFAMLPFTGYNMADYFNHWLQMGENLGKKTKAAGNQLPKMFKVNWFRRDTNGDFVWPGFGQNMRVLQWIIERCEGTANAVRTPIGLVPTYDDINWDQSDFTKAQFELVTSQDKDAWIKELESHAELFDKLGERMPTALKAHNAKLKADIEQA*	mmseqs_cdd	nonviral_gene	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0063	persistent	direct	high	1832	0.999	GCA_003971345.1_00917
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	999457	1002336	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	50893	53772	GCA_003971345_1_1_922	GCA_003971345_1_1_922	-	1832141	.	PDB:5EMI_A	Cell-wall-hydrolase-autolysin	MKKHTKSSISTQILKPLSLAISSCILVACSSTGTPAKPVSQTPKPIPQAKPSQQINISSGNTNLGNTKTGADVDVLDVQMLDALEALLQATDMSMVEGDELAIQRYGNLWDRVRRGYRINEMTNARIEAQKSWFYTRQTYLDRLTARASRYLHHTVAEAERRGIPSELALLPIIESSYDPTATSNAAAAGLWQFIPSTGRIYGLNQSATYDGRRDVIESTRAAYDFLTSLYNQFGSWELALAAYNAGPGRVSRAIKANQDQGLPTDYWSLKLPTETMNYVPRFLAVAQIVRSPNTYGINLPAIANHSHFRTVPVNYGVSLSEVATVTGLSVSELRLLNPALLNFTVDEIGPNRIVIPDSLPNQIDNQLASLKGYGFGGDYIATAPAQSITYVVPKSGATANTSSQQELIAANTLPTTIAQVTPNNTIVQEPALSKSEINLIAAEIQKTSPEVPAISPQDGNIQLNAVQTGQSVLDARGETKMLSFADGPKTQAVAQQPTQPVQVAVTPPAQPVQITVVSPTPEPISQPKPQLPPVTASIPVVSSPPVLVPPPPSRPRPEPASRPKPKPESYTVRAGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKRQPVSAQTPSRQSTSTANTNSATHKVSAGESLTAIARKYNISLHALAKENGLSVTDGVLIGQTLKLPSDAKTANNTMANTSSSPSVNKPESYTVRAGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKRQPVSAQQTSQATQSTKNNQSTQSTATHRVQSGESLTAIARKYNISLHALAKENGLSVTDGVLIGQTLKLPSDAKAESSTPSRLGNTKNNSTRTPANTNIGITENYTVRSGDSLTMLSNRFGVAIGDLATANGLASNANLRIGQTLKVPKLTTTYTVKAGDGLIALARRYGISTQELAKMNNLEPTADLRIGQVLTVPNK*	common_virus_hmm	common_virus	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0064	persistent	direct	high	2879	1.0	GCA_003971345.1_00918
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	1002531	1003136	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	53967	54572	GCA_003971345_1_1_923	GCA_003971345_1_1_923	-	1832141	.	PF13474.6	SnoaL-like domain	MAYSFIDKYIEYKGWFMKYSTRSVLRKAVAASMLTAVIRSAIQLTGRSFGKGASIGLFIGMIGVQSLITTNAYAISEQDVSRYASSMSSAANAQNIAQISRLIDDDAIISLSRGGKTTSLDKEGYLQLLQKSWATSSDYRYRINVADVVVTGNQARAQIVTTETWTQDGKPVTIKTASRATFSQVGNNAVLLRSVSQVTVD*	hhsuite_tools	hypothetical_protein	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0065	persistent	direct	moderate	558	0.921	GCA_003971345.1_00919
GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote	cenote	CDS	1003242	1004450	GCA_003971345.1	CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345.1_CP034663.1	GCA_003971345.1|CP034663.1	GCA_003971345_1_1	GCA_003971345_1_1@C62	54678	55886	GCA_003971345_1_1_924	GCA_003971345_1_1_924	-	1832141	.	COG4536	Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains [Inorganic ion transport and metabolism]. 	MPRPRTQNLANLSFVSIAIFTVSVAAIFIPSTAFAAFELGGTPTNLALLIFFICLSLVVSFLCSISEATLLTMTPSYIDTLEEDNPKGAALLKSVKVDHIEKSISAILTLNTVAHTLGSLGAGAQAVIVFGNAWFGVFSGVMTLIILIGTEIIPKTIGTVYWRRFAMPVAYYVRTINVALLPVIWVTEKISRMLTRGNQEIGFNRHEFLALANQGESLGQMSEMETRIIKNSLALGMINVEDILTPRSVVSAFDENMTVGDVFASYPKLPFSRFPIFDEDLDNATGFILKSDLLIAKANQEIHTPIKQFRRDINFVFAKMKLFDLLDLMLKEQVHIALAVGEFGEVKGLVSLEDVLETLLGLEIVDEFDRVDDMQILARQLMDKRMARLGAKLEEDAPFDEK*	mmseqs_cdd	nonviral_gene	C62	55886	948565	1004451	GCA_003971345.1|CP034663.1@region_948566_1004451@tool_cenote_CDS_0066	persistent	direct	high	1208	0.999	GCA_003971345.1_00920