core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote	cenote	CDS	139035	140915	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C11	1	1881	GCA_003977605_1_1_126	GCA_003977605_1_1_126	-	2685380	.	7B5H_DA	contractile tail, injection system, macromolecular	MANNKYPKYSEGNILTSEALNRSFDFLHQQVMITRRLMLGNGVLNGLGYSYDVEDKKANITINPGTAITESGLLVELPETRTYSYAKLENRDEYTLVEDKNEKPLKDVTDIDQFVLGLKVHFQEVPEQYCTSQSCTMKGTEVLVDVVPYLVRKKDVKSSVKEKTASAPVLSEPKSVSMGDLVEYPVLPIFLKRVARHFEEKRNILMEGLDNFIGVANYVPEAMKSYIKDCENMKKKLKGIHFNNRQSHQFHAFADDLLSAFNEFIVAYNIYHNRYDGIETSDHTGNLENKVVLGSVNTANSNEASSRSAFQSVTSALGKNAAETVIQRMFERIKLMINNFDPNLKSSDGPILIPVKSSAKLGDRMIPSYYKESPQFEQYWDAHNESHLSLKKTLEQSDYQQADFLRWTLYGNIETEKGLKKEEVVKKLEAEMANNRIPLFMIEYELAGDRRIYDILNYTDSDKKVSIEQIHVEKAKKLMQEYGYTDKNHKNILLKIYDNIKSKKYDIKSFQSFDSDAIDGLNNVVIDTVDSLKEDFDMEIHKIFEYIILANLANNDPKAFKQIRTFGIDYKGGVDYSSILLLITASKSVIFVMDVPTSSILFNEDWLQQIRKESDSSGTLQLSNDF*	hhsuite_tools	hypothetical_protein	C11	23125	139035	162160	GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote_CDS_0001	cloud	indirect	.	.	.	GCA_938041855.1_01039
GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote	cenote	CDS	140929	143295	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C11	1895	4261	GCA_003977605_1_1_127	GCA_003977605_1_1_127	-	2685380	.	PFAM:PF04865.13	baseplate-wedge-subunit	MAQYKENNNGRLVLDINALRQLGMKRISELSGSLWTDYNPTDPGITLHEILCFSVLDLGYRMTFDIPDLLTPDGYHYPSHEYSFHEPYKALSSGPITIGDYRKLILENVAGVKNVWLTPTTRKVYLPEDILSEAQGIDSESKSVDVKGYYDVFVDLVDNTPSSAGAAKQEVDRLLMKHRNLCENFLPCKSMEHIPVGIEADIEVESDYDYNALLSTLLDEISQYISTSLHLYSFTEMLEKGYSVSDIFTGPLPRLGYVDMSEIEPLDTNHKLYVSDIINIIMQHSGVKGVRHLAFVVKEENLREVVNMNYELSLQDDVITKKSFRFSQDPRLSQFTFMLDNYQFTAKIPENDANVHSTAGQSPFVCRFEEETSKNHKYDRYYTIQDDFPSIYLVGRENISDTEDDLRKAQRMQFKGYLLFFDQLLADFLMRINSARHLLSWEKYSHFDDWKEHQLGYMHRVLTGSDIDDFEKIVEKKTYGDWYEKHIFDAQGELKQRNMALNHLLARFNEDFVKYSVLQYIAQEDEGHDVTKREYEQMDSKTNLLRYLPYLGYHRARAIDYTQPLTLDPNYKGEDFNDGNYYAIERKLSVAFGVKNYHPARHLHPKVIQMKENIIEFEDNREVDYAETFGIHLYEHCLYAPVEKETEPFLRQYRSENEHEYVEDPYSMKVTAVLPGWLNVTQNYQFRELVEKSIQEMFPAHIAVKICWIGPRQMMDIENQHDDVLKDMEHGYSDLGHLTAFVQTLSHLKNMYQSAKMASEKEVSTNRYSRLDYTTLEPHDYYWQRNNK*	phrogs_hmm	hypothetical_protein	C11	23125	139035	162160	GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote_CDS_0002	cloud	indirect	.	.	.	GCA_902490035.1_02378
GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote	cenote	CDS	143301	146138	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C11	4267	7104	GCA_003977605_1_1_128	GCA_003977605_1_1_128	-	2685380	.	CDD:pfam04865	Baseplate-J-like-protein	MKKDIEYQGTYQNKRFPHGLKPDYFKLDDRTREGLLHEAAQLASHIKYYNDKNQLDDHWEEYFTDVYDYANKKVKTQFLDELEKKGEVPPHLGLFLAFADVFHVAQEELNRLAQRHLDYYYRHILHFEPQGAVADRVNLFFELTKNQERAVLPQGTLCDGGTDKNGRKRVYATDFNISVSHAGVDQVMTLTSMCEDGFLSLSTPHEDKFQSHAQFGFALSSPLLSLTDGERMIELTFSSSVEEWRDLVRVDYSSPTEWISLKSEISDERIKIHVTEKMPPIVIYEEAIHHMGLDAHEPVLRFVFSKLPSHFIESHIDIDKEEAVRIEKIRVEVKNSHELDCFTDYGIVNRDTPFLPFGTVPVADASTFKIKNHRIFNSFLKEPYSLHINWKGMPEDLAAYYKSYQDGWGLLDNSQQGFYKRFAAIWLNGSESARDWLQLKSHCREYLDLSEGQIQFVSSVDYGQNLYNTLLGKVMMHNTRLIERNGVMVTDEQQLSMPEKPYIPEIQSIAISYVLESEYHSSNSRMFAIHPVLPLEHPHAEYTDYNYSLWPNLHPLPENSTERSFNVSIKHLPSEGEFNVYFEILNPSSFVSTADTYVWQYLSADGWTDFSENGIIRDTTDHFNHSGVVTFVIPLNIDIDESDTTWLRLQMSKPAGSPMPSLVLARTNCTTATFCDNDNDLSHLRFGLPAGTVNRLVVRNAAIKSVEQPSSSFDGQEAESEESFYTRISERLRHKNRASSIWDYERMVLQKFPQVSFALCLPNVRFGKEGVQQLVEEPGNVLLLLSPNTELNPQSNILEPKVTVQNLDEIRQFIARLTSPHVSIDVTNFAYRTITVECNVQLRKGYYDLRHYREQLNQELRQYIAPWLNPKNKDSVNSLTYKSKNVSDIYFFLENLEYVDYVKSARIIVTNNSGNDQKIYNIADQVIEKEAYEMFTSAENHVIEF*	common_virus_hmm	common_virus	C11	23125	139035	162160	GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote_CDS_0003	cloud	indirect	.	.	.	GCA_024758905.1_04279
GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote	cenote	CDS	146150	146599	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C11	7116	7565	GCA_003977605_1_1_129	GCA_003977605_1_1_129	-	2685380	.	PDB:5IW9_B	Baseplate-wedge-protein	MSNSNYWRLTNMAEEKKYTFMGRGWSFPPMFSKQSRGIVMLSDEANVARSVRLCVQTRLGERMFHPNLGTEIDDFAFVRNYNTIDQQRLKRMIEYAIVENEPRVDVDDISIEHNLSDESIEISIAYTIKSSNTQFNMVFPFYYEGGLRF*	hallmark_hmm	common_virus	C11	23125	139035	162160	GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote_CDS_0004	persistent	indirect	.	.	.	GCA_000012845.1_02548
GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote	cenote	CDS	146572	146859	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C11	7538	7825	GCA_003977605_1_1_130	GCA_003977605_1_1_130	-	2685380	.	PDB:5IV5_ZA	Baseplate-wedge-protein	MAAAVRVGDVTTHGGVITGPGASTVLIGGQPAAVVGDLHICPIVPTPASPHLPSSPFVAGSTSVLICGRPALRTTDVCLCGANAAVGCPTVIIGG*	common_virus_hmm	common_virus	C11	23125	139035	162160	GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote_CDS_0005	persistent	indirect	.	.	.	GCA_002850575.1_00722
GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote	cenote	CDS	146872	148596	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C11	7838	9562	GCA_003977605_1_1_131	GCA_003977605_1_1_131	-	2685380	.	PDB:4RU3_A	phage-baseplate	MAETNADNSALSFKIMIDGEDLAEIAEVISIHLEKQFCKIPTAQITLYYGSLLNNTFADDERNAIAVGSDIEISASDDTCLFKGFVVRKSVSLTNRKSLLTLTVKNKAYRMAQSRWNHVFANVTDSDIIEQIIQKYSIGCDVESTSYQHELVTQCNCTDWDFVNLKADANGLLFFADDEKISVMKPNTGSASHEINGYDSILSFDAQIDGRNAFSGIKASSWNYNSQEKQDVEVQNSDSFKQGNATTGQLADKLKNEMLNINFLSSFVDTEAMTGKINGMMMRYNLSRIIGKVKIYGILSSKPGECVTFSGVGESFNGNAFITSVEMDFTDGAWTTTLGFGMEETPYFWAYDDVNAAPSSELGAAVYGLQLGKVTAVEGDPADEFRIKVSLPCFDGDYTEVWARVAMPDAGESRGIFFYPEVDDEVVIGFVDQNPNNPIVLGTLHSSKRSAPQPLSNDNNMKGIYLKSEIKLEFNEEDKIVNLETSGGNKLVLNDKDGKIEIVDSNGNQITMDNQGITIKSAGKIAVEASQDMSLKGVNITAEAQAQLKASGCAQTELSSSGIMVVKGSLVQIN*	common_virus_hmm	common_virus	C11	23125	139035	162160	GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote_CDS_0006	persistent	indirect	.	.	.	GCA_000012845.1_02547
GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote	cenote	CDS	148605	149267	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C11	9571	10233	GCA_003977605_1_1_132	GCA_003977605_1_1_132	-	2685380	.	pfam19266	Contractile injection system tube protein. This protein is part of a contractile injection system. This family includes the Pvc7 protein from the Photorhabdus asymbiotica virulence cassette (PVC). Pvc7 is made of a tube protein (this entry) and an additional LysM domain. The equivalents of these two parts in T4 phage are gp48 and gp53, respectively.	MEDKNENGEIFRMKFRSKVEKEKDISGKDNDLNEFEVMINPATIDRKLSIEKTSNKSGKSKDKSDVFSASPEVFSFSFYLDGTNVVPNQKGRSVSDMISNFLKIVYQKDGKLVQALIIEYLGDSFIVCTNSIDINYSLFDLKGNPLRAKVSCSFSTVKESAPQKPSNKSKTKQQKPDPVPECCNPDNARSAEKYSLKEQNITPTNANFSHESGVEMYVEN*	mmseqs_cdd	nonviral_gene	C11	23125	139035	162160	GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote_CDS_0007	cloud	indirect	.	.	.	GCA_938041855.1_01033
GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote	cenote	CDS	149290	149445	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C11	10256	10411	GCA_003977605_1_1_133	GCA_003977605_1_1_133	-	2685380	.	.	hypothetical protein	MAIKINELVIRATIEKERSSRQAENENASEMVLTPEKTIELQSFNKLNRER*	.	hypothetical_protein	C11	23125	139035	162160	GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote_CDS_0008	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote	cenote	CDS	149451	152072	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C11	10417	13038	GCA_003977605_1_1_134	GCA_003977605_1_1_134	-	2685380	.	UniProtKB:A0A0R1V141_9LACO	Minor-tail-protein-	MENKKKEDQQYSLIPAYNFKVGFDGASKDEELSFSEASGIRSEIQYEEIWEGGVNNTSYKLPKAVKFPHLVLKKGSVPQTDSFVQWCEKAIYSLVFEPHTVQVVLNEGDKPIKGWRFHNAYPVIFEISSLNATKSEILIETVELVYSSMSSILSDEAQKLKDIQDKTAKKAENAADKAGKAAETAKYAEKIKEDAKKKLTAEASKVAKLADDVTKKTDSVVSALEKQKDSILSPITQLADDMTDTINKAVKEVDKVMSEINKAAKEGEKLFKEAQKKANDFKEKVEDVKKEVEEKIDEVKEKVEEVKTQINEIKDEVKEKVEQAINEINEVKDNVEQNVKKIVDEAKESINEAKTKINYVKNEVVDKFNEIKDEVTDIIEEGKDKFNEFKKEATDKINAVKNKATDIKNDLVEKGQQLVKDAKEAVDKVMAEFNEAIGELNKAANNAKKTVKSTLTKAQNTVQKLGNELKTGADSLIKEADNAINGIKKEIGNISDEITETVDNIKDDVSKTVKETKNQINEMVNEAKTEVNHIKSELTTAANEIKTGVDSAISDVKSFASQSVQEVQNLASGLSEEIQNVPKNVSKAANEVVSEITDGVTSLSDGITNSLDSMQHEFSQSLNQLTGSVEETIQDFGNQLENVVSQTEKSISNVTESAGNIANGLKAEIEKLKKQSNDLPEDVLSEVTSVINQVDGVVKDIPEQASNIINQMNQTSQAIVANIDAQAKLVKENVESATKVMQTKTEDMVTTINNTLTKKLPEIVDKQVEDAKKAITGETTKAERKLADVKKAVKSEMNNLLSSASKTVNTAQKAMNAANATAKEAINTAQNNVSNAAKELANQLAASETELQNVMIQQIDAINNIRVKFNIKV*	hallmark_hmm	common_virus	C11	23125	139035	162160	GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote_CDS_0009	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote	cenote	CDS	152169	152621	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C11	13135	13587	GCA_003977605_1_1_135	GCA_003977605_1_1_135	-	2685380	.	PFAM:PF06841.11	major-tail-protein	MEENSYPLPSFHFEVKWSNEDKESVAFSEVSGLSAEQNVIEYRAGNSKEYALIKMPGLKKYGNITLKRGALPKDNALFEWFNKAQLNTTERRNVVISLLDEKHEPVITWKLQNAFPVKIDNANYNSTANEVLLESIELAVESVSVERPKK*	hallmark_hmm	common_virus	C11	23125	139035	162160	GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote_CDS_0010	persistent	indirect	.	.	.	GCA_000012845.1_02544
GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote	cenote	CDS	152643	154157	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C11	13609	15123	GCA_003977605_1_1_136	GCA_003977605_1_1_136	-	2685380	.	PDB:3J9Q_Q	tail-sheath	MATSYKTPGVYVEEIPKLPQSVADVPTAIPGFVGYTESGSEGIVPVKITSIIEYENNFGKGPGANKSKKFVTYDSLRLFFDNGGGTCYVVSVGGYDKTPSADDLKSGFTALKDIDEVTLLVTPDAASLLDAEQLASVQQAMLLQCKELGDRFAILDVKDVNTKSIDECVDDFRSKIGTVGLNYGATYYPFIYTSYNYSGFDFSTIVGEVMSKYPIADKKTKTNNVETDAPSNNNGLKEAIKGWFKDDRQSILCFLRAWQSQNKNVKIEEYCDNVVDKEKKVDDESAEKALQNAIKSFIPGYAEKEEAMAVQKSIVPPSGAIAGIYAQTDNYTGLWKAPANVSIASVKGLSRNINNNTQDNMNVHPTGKSVNAIRAFSGKGVLVWGARTLAGNDNEWRYIPVRRLFNYVEESVQKSTDWAIFAPNNQNTWTKVKSQIENFLTNLWRAGGLAGATPNQAFYVNVGLNSTMDVNDVNEGRMIVEIGMAAVRPAEFIILRFSHKLQES*	hallmark_hmm	common_virus	C11	23125	139035	162160	GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote_CDS_0011	cloud	indirect	.	.	.	GCA_024758905.1_04293
GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote	cenote	CDS	154235	154939	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C11	15201	15905	GCA_003977605_1_1_137	GCA_003977605_1_1_137	-	2685380	.	pfam14065	Protein of unknown function (DUF4255). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 190 and 320 amino acids in length.	MALYTALSFIRDKVEVFLNGLNVSTHLDAITKDDTKDEGVYVTLLYFEEEKTLKNNRHFIPQYDDKAQLEGYQKVNPTIFLNLYVMIASNHSAYDEALKQISRVIEEFQKKNVFEKKENNKGDIDGNKYPNLDKLIFEMETLSFDQNNSLWQTIGSKLYPYVIYKVKVIAFAQSTGDSVPKISEEHLVFEVEAHPNTKKENKQKEKPNHEHHLYMQNDDYIFADEKVVKKETGG*	mmseqs_cdd	nonviral_gene	C11	23125	139035	162160	GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote_CDS_0012	cloud	indirect	.	.	.	GCA_938041855.1_01028
GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote	cenote	CDS	154957	157830	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C11	15923	18796	GCA_003977605_1_1_138	GCA_003977605_1_1_138	-	2685380	.	PF13699.6	Domain of unknown function (DUF4157)	MGTAFSTIRAQKKYNKKNDETRKSDSNIHIPTFSSRQVIVQPKLDCTEAGDMYEREADLMADYVTNLSFAAGADGGKSRPSRVFSLGHFISRRASNPSGIQIDEEMESKIKSSHCGEPLPNVLRSRMESSFGADFSGVRIHTDNKAAEMNTNLHSKAFTYGQDIFLGRGEFSPGTKMGQHLIAHELTHTLQQSDMIGRKPKNEFDFTEEMDDSKSDFTSYNLSGFQDSDFKPSEESFFDDKSTLTSKIRNRHVKKNISYLYQRLSNLYNYHNAQTNFVERLHKKHKGIAKKVFPVILPFEPYPSILLFYDDFNLTTIKKEIQKLQDRTQKLHNRNTEDKEKNLDKTAFDEKIQNLDTSLDYLHAIFEKRQKELCDIDEGYNRFSYEFEQYLMNQTLDLANYCSNVRIPLWQLKLGLDKVLQEIQNHNEESLFYDLWVSDDHFDFMINTYTMLSESMYTCIKYCESLGTLLLYYATSDYYKNHSLKDFLNEKEKLVSIIKNYQSSFTNYINNLVEFDKNTKQKAFWTQVGIDIAASIALCLIPGLGAAAIVGNTAKALGLGARVLIGVGTGAAGGTLASAGVQLIDIGLTEKKLEDFSGFDVSYGALSGGVAGGVLGGTGNFIPLIANSLLKPGANAVIKSLGVGFANTGASVIADFAGAGASSLISGKDMNFNWTEEFIVNAIFSAFHARSVYKNYKKDEFRFDKDMHTNYEELINPTDRDEFRNQLSDLYVKKASDTYNVNRSALQEIAHAFKNPPFDKNNIKGKITGFFNNLKQIKSDRDLSLKIINASFDSDINNILTPKKEILYIMQIQEGKSWKTALKNAYSEKNLVDDHIKEFENLFNKITYGITDNLGKPNDNIYTITSNVIPNITQTSPKESYKQQVSDQEFNLDNSIGAASNDTEAVKALLELFALDEVPENTEELKLINEQINSLNDPTLNTLIILSKNYDKVIDES*	hhsuite_tools	nonviral_gene	C11	23125	139035	162160	GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote_CDS_0013	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote	cenote	CDS	158223	159245	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C11	19189	20211	GCA_003977605_1_1_139	GCA_003977605_1_1_139	+	2685380	.	PFAM:PF13701.5	Transposase-DDE-domain-protein	MIFCQFADCVSLREISNGLYSANGNLNHLGILRAPSKSNIAYQNEKRSCAFFRECYYKLLNHFGQQVRFSGRKFRFKNAVYALDSTIITLCAEVYDWAHYTHSKGAVKLHTLLNFMTLLPEYVHITDGKVADNTAARHVEVKPGSIVVSDRGYFDTRLLNIWDSIKVFFVVRVRDNLLYKRIEERELPDNAYQEVLIDEIVILKGNETVEQYPKPIRRIAVYNAEHGFTIELLTNNMKLSAGTIAGLYKARWDIEVFFRNLKQNFHIKSFVGTSSNAVEIQMWTALITILLFAVLKQQATYKWHFSNLVSSLRLNTFTKIDLYQWINKPFTPPPENEFET*	common_virus_hmm	common_virus	C11	23125	139035	162160	GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote_CDS_0014	cloud	indirect	.	.	.	GCA_905372655.1_01918
GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote	cenote	CDS	159696	160319	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C11	20662	21285	GCA_003977605_1_1_140	GCA_003977605_1_1_140	-	2685380	.	COG3385	IS4 transposase [Mobilome: prophages, transposons]. 	MCLEAHKPILYHIGFRNTVNQSSLSRANEKRDYRIYEELGTYLISVVRPLYAKTSIPEITVDNVLYALDSTTISTSIKLATWALGKYSRGAVKIHTLLDLRGSIPANIHITNGRWHDSNELDVLEPEPFAFYMMDKAYVDFDALFRFHLAGAYWVSRPKENMKYEVLGHRKLSASDVEGGIIGDFHHSPDHQDGCPLSRADTRSLHL*	mmseqs_cdd	nonviral_gene	C11	23125	139035	162160	GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote_CDS_0015	cloud	indirect	.	.	.	GCA_008121405.1_01856
GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote	cenote	CDS	160343	161269	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C11	21309	22235	GCA_003977605_1_1_141	GCA_003977605_1_1_141	-	2685380	.	PFAM:PF13612.5	Transposase-DDE-domain-protein	MITKDKVIEIFCIIDEFDKNLNVELSKNLCLPSYNSNGKRFRNRKGRLSESEIMTILVCYHFGTYRNFKEYYRNCIRGWLRHEFPAAVSYNRFVELMPRVFFKMMLFMKLHAFGKCTGITFVDSTMIPVCHNVRRYFNKVFAGFAKNGKGTMGWCPGFKLHLLCNDSGEVITFCLTGANVDDRDSRVWTVFAKVLYGKVFADRGYIKQELFENLFSQGIQLVHGLKARMKNKLMPIWDKIMLRKRYIIECINELLKNKANLVHSRHRSIHNFIMNLCSALTAYCFFENKPEALPVYVEKSRQLELFSC*	common_virus_hmm	common_virus	C11	23125	139035	162160	GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote_CDS_0016	shell	indirect	.	.	.	GCA_000142965.1_03003
GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote	cenote	CDS	161557	162159	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C11	22523	23125	GCA_003977605_1_1_142	GCA_003977605_1_1_142	-	2685380	.	.	hypothetical protein	MITLKAVVRKPCTDGFFSVYIRIVHNRKPGYIKTNKIIDAAHIDSKGELTDPMVNEYCSMLIRQYTDRLNRTDVSLWDVKDVLDYLQKTDEEVCFSEYAKSFIDKMEKESRHRTAKNYKLAVSHLERYIGTNRLMFSLLTSTILKKRIESLSQTSRAKEMYPTNIRQIFKAAIADLNDEERGVTRIKFNPWLKNIYPKIG*	.	hypothetical_protein	C11	23125	139035	162160	GCA_003977605.1|RYYU01000001.1@region_139036_162160@tool_cenote_CDS_0017	cloud	indirect	.	.	.	GCA_937990705.1_00418
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1038042	1038176	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	1	135	GCA_003977605_1_1_913	GCA_003977605_1_1_913	-	2685380	.	.	hypothetical protein	MLIHVKLYHFFNSLRVVLLLIRRMFSPRCGSGIWDTIVFYPELA*	.	hypothetical_protein	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0001	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1038331	1038549	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	290	508	GCA_003977605_1_1_914	GCA_003977605_1_1_914	+	2685380	.	.	hypothetical protein	MRTINSFILLCVFCQFCQPTFAQRRVWLADLPPYDRAVVVVKYFEGLNGWKDFIRMLGIGISCNQESTSRQI*	.	hypothetical_protein	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0002	shell	indirect	.	.	.	GCA_900167385.1_02418
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1038546	1038839	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	505	798	GCA_003977605_1_1_915	GCA_003977605_1_1_915	+	2685380	.	PDB:3HDF_A	Lysozyme	MTERQADSLIRADLWKCFEHFKGYGKDALLLTLLAYNVGVGRLLGYGKHPKSQLLRKVEAGNRNFYREYISFCRYKGKVLRGLVKRRHVEFALFYVP*	common_virus_hmm	common_virus	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0003	cloud	indirect	.	.	.	GCA_015679285.1_01722
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1038941	1039072	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	900	1031	GCA_003977605_1_1_916	GCA_003977605_1_1_916	-	2685380	.	.	hypothetical protein	MSVTKIIDEENITIVQGVNGILLYKEGWMKEKKEQEDNLYSNS*	.	hypothetical_protein	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0004	shell	indirect	.	.	.	GCA_000613325.1_01576
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1039090	1039803	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	1049	1762	GCA_003977605_1_1_917	GCA_003977605_1_1_917	-	2685380	.	COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE [Coenzyme transport and metabolism]. 	MNILDKKMMANRQSNSYQRMMEHYDDLLTGRKWWSKIYMRFIWNEDTNLLARKVLDLIPDDFRGRLLDVPVGTAIFTAEKYRRMKDAEIVGLDYSEEMIAIAALRKETEEIANLSLEQGDVGELPYANEIFDCVLSMNGFQAFPEKEKAFAEIFRVLKPGGCFCGCFYVKGERRLADLFVKKVMERKGFFHPPYDTFAEAESRLRSMYGDDVLTEKMASVCLFRCVKPQRESTENEQ*	mmseqs_cdd	nonviral_gene	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0005	cloud	indirect	.	.	.	GCA_027696975.1_01555
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1040093	1040239	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	2052	2198	GCA_003977605_1_1_918	GCA_003977605_1_1_918	-	2685380	.	.	hypothetical protein	MEHSFFTTLQAGWLNAWIPSFGMVLIQFSFTSPRKTLPLYRHNETYSR*	.	hypothetical_protein	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0006	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1040253	1040897	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	2212	2856	GCA_003977605_1_1_919	GCA_003977605_1_1_919	-	2685380	.	.	hypothetical protein	MDKKLRLTGYAGITGSLLMYIGDMLLYFTTQPIPDREKDLLLSMGTVPLERLVAGGIIGPLAAVLYIIGFYHLFIRVKKERRKTACCMLASLSVSIIVGGAYHAFFPAFGIVSSQGHPEIIDHLLSYTGWLGGFSFFLMGIGWLLFSVLVLQKQTSFPHWTVIVTPLITLWLNFLWKMLPQPFLLLIAGGWNNLVHTLIFAVSLLTLNKCMKRQ*	.	hypothetical_protein	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0007	shell	indirect	.	.	.	GCA_000431415.1_01757
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1041621	1042697	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	3580	4656	GCA_003977605_1_1_920	GCA_003977605_1_1_920	+	2685380	.	.	hypothetical protein	MKNCTVSKHPIHTLLDEFFAKEEIRNVITEYQNKNSKISKRLMFSDYCLDDKNKSNDVMTFVLMPFESEAKHSEMQQKIHDMQPSDIKKTNTVNETFLSYLKSENVLIFSFVFDDRKHFLALSHNQCLEGVKRTLQTICDCHEGWKRTADNEDIIEHYKNVVNKLKQLLATLNGKNPDINLLNDILITAFLGAFVSAKVLENLSIDIFGWFSDRDKVISGKNNIIVPIFNYYQHNMLGGKQFKLCTFTPDDKVEPFFDDFNRIADVVTGAIADYNLEENYITADKVNTVLIHLLADNKQVFIFRIHKIDDNYHVGQITMHPKLRFKIIVQNFICGMKQVISKWNEKMGSIILRGKKGG*	.	hypothetical_protein	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0008	cloud	indirect	.	.	.	GCA_037889345.1_00887
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1043337	1043843	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	5296	5802	GCA_003977605_1_1_921	GCA_003977605_1_1_921	-	2685380	.	.	hypothetical protein	MKKGVSFMAADRAALKENVLHFDNLGVSVLEFTSEEGKNLANQEGVLAVEEDVKMYAFDIEPEGFDADYEPEVFINQKVMEKLEGTQENIEGARVKSNLRYKVASLETINLLEVQEEDTVVGEKTVPEAESLPFNFEMLSDKNKLFAVESLADEKQTQSQARGSSQTA*	.	hypothetical_protein	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0009	cloud	indirect	.	.	.	GCA_002763955.1_02332
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1044051	1044818	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	6010	6777	GCA_003977605_1_1_922	GCA_003977605_1_1_922	-	2685380	.	PFAM:PF13612.5	Transposase-DDE-domain-protein	MTILVCYHFGTYRNFKEYYRNCIRGWLRHEFPAAVSYNRFVELMPRVFLKMMLFMKLHAFGRCTGITFVDSTMIPVCHNVRRNFNKVFAGLAKSGKGTMGWCHGFKLHLLCNDSGEVITFCLTGANVDDRDSRVWTVFTKVLYGKVFADRGYIKQELFENLFSQDIQLVHGLKARMKNKLMPIWDKIMLRKRYIIECINELLKNKANLVHSRHRSIHNFIMNLCSALTAYCFFENKPEALPVYVEKSRQLELFKY*	common_virus_hmm	common_virus	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0010	shell	indirect	.	.	.	GCA_015260395.1_00379
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1045067	1045702	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	7026	7661	GCA_003977605_1_1_923	GCA_003977605_1_1_923	+	2685380	.	PDB:3VQ6_A	RNAseH,-DNA-binding,-DNA-cleavage	MYHQLISEQRSQIFALLQKKTARKEIADIVGISQSTLSREIKRNSTPSGKYIWTRAHDMAMQRRKRTITNAKLSDELVRRIKEYITNYRWSPRQISGYLRINEGIKVSHRSICNIIHNDTTGKLAENTRHKMKYRHRPKGGQLPIKDRVSIHERSKEVDGKRFGDFEMDLIVDPNRNAILTPMEKSTNMLLMQKLPFGKQSKPPAKVVRKL*	common_virus_hmm	common_virus	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0011	cloud	indirect	.	.	.	GCA_018279805.1_00180
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1046067	1046261	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	8026	8220	GCA_003977605_1_1_924	GCA_003977605_1_1_924	-	2685380	.	.	hypothetical protein	MSDKTNNNGMKGISYQKRVKEINAIYDKHVKSGLSNREIWRRYIYPIYGISERALYNYLKCNFE*	.	hypothetical_protein	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0012	cloud	indirect	.	.	.	GCA_027686445.1_01682
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1046331	1047203	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	8290	9162	GCA_003977605_1_1_925	GCA_003977605_1_1_925	-	2685380	.	PDB:2XD8_E	Major-Capsid-Protein	MALNKQVWINQIKEGFYPERSFLNKVENFTDLVDNDTLHFPSAGIDPKVLVNNSTYPIKIVGREDEDNAIVLDKFETENTLVRRPDAIEYSYDKLDSVIRQHRSTLQTTTARKAAHAFAPSKDTTDTPLVLTTGAAVRGRKRITFEDLLALKERFDDALIPLEDRYIILHSRHVTDLLLEDVKLFKELTDIKDGEPMKFAGFGCYQFPFMPTYKANAGSWEKVAYNDEQTEQFASVAFYAHEVMRADGEIYMYARYDDPEERGTIVGFDKRFIALPIRGKGVGAIISATA*	hallmark_hmm	common_virus	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0013	shell	indirect	.	.	.	GCA_018786185.1_02112
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1047214	1048266	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	9173	10225	GCA_003977605_1_1_926	GCA_003977605_1_1_926	-	2685380	.	PFAM:PF04586.16	prohead-serine-protease	MSKNSFIISDESVNSYGYIVKTDGIDTTVFERNPVMLYMHERKTVVGRWENIRKEGNKMLADAVFDESTELGRTVKAQVENGFLRSASIGVDIIEDTVINGVKTITKCSLFEVSIVDIPANQNALKLYRKGNRKRLTLGTAQKVEDLHSEIITLLGLSDDVSDEDIIAEIQTLLNVPDEASIEVENAVKAGFVESKDKGNFLTMARISPQTFRSFVSREKEKRKKAVLAAVDAAFFNRRIGCTQKELFARVGNEMGLETLSLLLGSMPKVLKISEILSKDRQGWTLTDYRKYAPDELRKNPKLYAELIDKENSIVGGGNGGKQTLDYLRKHNPEYLREHPEEYEKLLSNI*	hallmark_hmm	common_virus	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0014	cloud	indirect	.	.	.	GCA_937950115.1_00878
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1048737	1049039	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	10696	10998	GCA_003977605_1_1_927	GCA_003977605_1_1_927	+	2685380	.	.	hypothetical protein	MIAKINLDGKERMAIVFDETFTFEYISKFRQAINSYMQTTEAHLDSKGCDYTLHEDNYYLHVLMNEMDFTENQIFSKLNLYYNGKHDNGKPEKKLCEIYI*	.	hypothetical_protein	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0015	cloud	indirect	.	.	.	GCA_937950115.1_00880
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1049602	1049991	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	11561	11950	GCA_003977605_1_1_928	GCA_003977605_1_1_928	+	2685380	.	PDB:3VQ6_A	RNAseH,-DNA-binding,-DNA-cleavage	MYFFRYIRFVLCPIKLLLPYKDYLKTITTDNGPEFAAHKDITKYLGVPVYFADPYCSWQKGAVENTNKLIRQYIPKKESFNQYTDKRIMSIQKKLNERPREKLNFSTPKCEFFKQVLRQFGISLVFKQF*	common_virus_hmm	common_virus	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0016	cloud	indirect	.	.	.	GCA_000239695.1_00085
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1050123	1051244	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	12082	13203	GCA_003977605_1_1_929	GCA_003977605_1_1_929	+	2685380	.	pfam19580	Endonuclease/Exonuclease/phosphatase family. This domain appears to be related to pfam03372.	MQILQQFCVTLRPNYEYIVPNNKKQHILMKKFLIFLFCMVAVATYGQKKFHVYGVGFYNQENLFDTCHDEGKNDYEYLPTGANRWGEMKYKNKLRNMARALADMGTEMLPNIGCAIIGLCEVENSKVLDDLVAQEPLRARGYKYVHLEGPDVRGVDCAMLYNPAIFEVRDYKLVPYVQELEKDSAYHTRGFLTVSGTLADEHVTVIVCHWPSRFSTSFYRESAGRQVRALKDSLQREDPDVKIMVMGDMNDDPMDKSMRIALGAKAEMSEVGPDDMYNPWYNTLAKKGQGTLSYQGSWNLFDQIVLTPNLIAGTQNKDYSKLTFMKHNIQLRDYLMQDEGKYKRTPKRTHGGGVWLNGYSDHLPVAIFLVKEK*	mmseqs_cdd	nonviral_gene	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0017	persistent	indirect	.	.	.	GCA_000373085.1_02209
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1051251	1051823	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	13210	13782	GCA_003977605_1_1_930	GCA_003977605_1_1_930	+	2685380	.	cd10032	Uracil DNA glycosylase family 6, includes hypoxanthine-DNA glycosylase and similar proteins. Uracil DNA glycosylase family 6 hypoxanthine-DNA glycosylase (HDG) lacks any detectable UDG activity; it excises hypoxanthine, a deamination product of adenine, from double-stranded DNA. Uracil-DNA glycosylase (UDGs) initiates repair of uracils in DNA. Uracil in DNA can arise as a result of misincorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations. Thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other.	MHIERHPLQPFIPEGARLLMLGSFPPARHRWSMDFFYPNFQNDMWRIFGHLFFADKLHFVDVDAKTFRREEIISLLTEKGIALYDTAIEVNRTRNTASDKDLEVVTPTDLDGLIGRMPMLETVVTTGQKATELFANHFQIPQPKVGESVQFTTGGRIIRLWRMPSSSRAYPMKVEKKAEEYSKVLSSLNG*	mmseqs_cdd	nonviral_gene	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0018	persistent	indirect	.	.	.	GCA_000173955.1_01000
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1051889	1052524	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	13848	14483	GCA_003977605_1_1_931	GCA_003977605_1_1_931	+	2685380	.	PRK05480	uridine/cytidine kinase; Provisional	MTIIGIAGGTGSGKTTVVKKLAAALPPHYVAVVPLDSYYNDTTGMTDEERRAINFDHPDAFDWKLLIKQINELRSGNAIEQPTYSYIISNRLEETVHVEPKPVIIIEGIMTLINRKLRDMMDLKIYVDTDDDERLIRNIQRDVMERGRTVEMVIDRYLKVLKPMHEQFIEPTKKYADIIIPQGGENLKGIGILCKYIEGIVPQGHEPQIKD*	mmseqs_cdd	nonviral_gene	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0019	persistent	indirect	.	.	.	GCA_002205555.1_03165
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1052966	1053478	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	14925	15437	GCA_003977605_1_1_932	GCA_003977605_1_1_932	-	2685380	.	PFAM:PF13612.5	Transposase-DDE-domain-protein	MICYHFSTHRTFNDYYIHYIKGYLKRDFLTAVSNNRFVELMPRVFFKMMLLMKLYAFGKCTGITFVDSTMIPVCHNVRRYFNKVFSCLAKNGKGAMGWCHGFKLHLLCNDSGEVITFCLTGANVGIAGYGRCLQRFCMGRSLPTGDMSIRNYSRVCSIKVSNSFLGSRLK*	common_virus_hmm	common_virus	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0020	cloud	indirect	.	.	.	GCA_002529125.1_00988
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1053826	1054920	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	15785	16879	GCA_003977605_1_1_933	GCA_003977605_1_1_933	+	2685380	.	PFAM:PF13588.5	endonuclease	MDFKDSIKQLAEKIGQLKDGILTEEATKNAFIMPFINALGYDVFNPLEVIPEMDCDLVKKKGEKIDYAIMKDGAPIILIECKHWQQDLSLHDTQLKKYFVASKAKFGLLTNGIKYLFYTDLEDQNIMDEKPFLELDITDVKDYQFEELKKFHKSYFDIDNILNSASELKYSTELKKIFAEEVVEPSPEIVKYFAKQVYDGVITAKVQEQFSTLVKRAISSYINELISNRLKTALNNEEQRDSISTTNQTLEEQPASVAEEPAEGKIVTTQEELDGFNIVKAVVRKSVDVSRVVYRDALSYFSILLDDNNRKPICRLYFNGKSKKYISTFDQDKKETKHEITDLNDIFNFETELCEVIKAYNEKI*	phrogs_hmm	nonviral_gene	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0021	cloud	indirect	.	.	.	GCA_946997865.1_01534
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1055375	1055707	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	17334	17666	GCA_003977605_1_1_934	GCA_003977605_1_1_934	+	2685380	.	.	hypothetical protein	MFRIYSYICKKNYSKMYLFLFSKGGAFMCFIESILTFISDGISTLKDTIHGRYGLQTEEACKMREDIFSNQSSPDDDKKKLQNDRLAVGGDFRRAFTKITTKYGQEANKQ*	.	hypothetical_protein	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0022	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1055682	1056104	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	17641	18063	GCA_003977605_1_1_935	GCA_003977605_1_1_935	+	2685380	.	PFAM:PF10097.8	membrane-protein	MGKKQISNKETKVATQGGIGQQYEQTVTVDDNTLPSPQELAEYKTIDPRIVDYLLDAAKEEQRHRHKIEEDKVKTVKNAERRTTRMNWWGMFFAFLALVALIVLSAFALYLNHPWFAGIFSFATAVSILSIFVDGGKKKK*	phrogs_hmm	hypothetical_protein	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0023	cloud	indirect	.	.	.	GCA_000382445.1_00299
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1056116	1056262	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	18075	18221	GCA_003977605_1_1_936	GCA_003977605_1_1_936	-	2685380	.	.	hypothetical protein	MLLSPLFEKYFSKFSDGKDMNNPRNVQMFRGLFIFIYKIRVTHVVHEL*	.	hypothetical_protein	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0024	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1056497	1056724	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	18456	18683	GCA_003977605_1_1_937	GCA_003977605_1_1_937	-	2685380	.	pfam13612	Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contains three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	MPIWDKTMLRKRYIIECINELLKNKANLVHSRHRSIHNFIMNVCSALTAYCFFENKPEALPVYVEKSRQLELFSC*	mmseqs_cdd	nonviral_gene	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0025	cloud	indirect	.	.	.	GCA_902485115.1_01444
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1056953	1058035	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	18912	19994	GCA_003977605_1_1_938	GCA_003977605_1_1_938	-	2685380	.	pfam13308	YARHG domain. This presumed extracellular domain is about 70 amino acids in length. It is named YARHG after a conserved motif in the sequence. This domain is associated with peptidases and bacterial kinase proteins. Its molecular function is unknown.	MKKIIVFLLVLMQLSCVAQDFSNQDDSYWTDGMTFFVLNPHSNKKDFYVGSGGTLHEGGVLFGLQGKDGKYILVETDNGEPKGSQMYQYGQYLLYEAKNVKVELKTISDKRYLLFYSGKELVTVFHEEKGKPFSEKSTGLYALEKRIVQKILLAGEYIDSKGDLVTFSAKGQDVYGLNKGGSAYKIMEMYDMPDRLIKLSDGTIYEIEHDDDGLTLTRMKKRRDDSGDFEPTEYKVKLYHVLPNQMKGTAGKTSRFDFASNEMLYIDWLGNFTNNELRLMRNEIYARHGYRFSTPDMQEYFSACPWYSPRDNNDAAVAELSEIEKINVQQIKRAEKQKIMNGQQPVKTFLSKNYLRPIYV*	mmseqs_cdd	nonviral_gene	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0026	persistent	indirect	.	.	.	GCA_001006485.1_00900
GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote	cenote	CDS	1058101	1058856	GCA_003977605.1	RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605.1_RYYU01000001.1	GCA_003977605.1|RYYU01000001.1	GCA_003977605_1_1	GCA_003977605_1_1@C87	20060	20815	GCA_003977605_1_1_939	GCA_003977605_1_1_939	-	2685380	.	.	hypothetical protein	MKKIFNYSIVFIALMLGVQVSIAQTESSTIKVSFKGDHPTILDFMNSYSLANPDDEMIKDFVKDIKKGSRVYKEGEYRKIKLVKDVNSGYVSWELLDGFECGSLIKIEMCYWNCDNKQEKIFAINWIVTRCAGMKSIMTFFRYNNATRMMHEIPAPYDRKVMPIDFMNLKNASPEKIREARHVSDKVAKGIDEEDDDDDDLLKDWALIFDLPRKGKNIEIHISNEDEFEPSEIQRCRYVWNGNGFNLTVMK*	.	hypothetical_protein	C87	20815	1038042	1058857	GCA_003977605.1|RYYU01000001.1@region_1038043_1058857@tool_cenote_CDS_0027	infer_flexible	indirect	.	.	.	no_good_uniDB_hits