core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	genomad_gene	genomad_length	genomad_strand	genomad_gc_content	genomad_genetic_code	genomad_rbs_motif	genomad_marker	genomad_evalue	genomad_bitscore	genomad_uscg	genomad_plasmid_hallmark	genomad_virus_hallmark	genomad_taxid	genomad_taxname	genomad_annotation_conjscan	genomad_annotation_amr	genomad_annotation_accessions	genomad_annotation_description	genomad_element_name_std	genomad_element_name_orig	genomad_element_gene_wrt_to_contig	genomad_element_gene_wrt_to_element	genomad_element_gene_start	genomad_element_gene_end	genomad_protein_translation	genomad_phage_region_id	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	genomad	CDS	161027	161311	GCA_004138395.1	PRLM01000001.1	GCA_004138395.1|PRLM01000001.1	GCA_004138395.1_PRLM01000001.1	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247_158	285	1	0.460	11	AGxAG				0	0	0	1						GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	GCA_004138395.1|PRLM01000001.1	158	1	1	285	MNPGNHASSAHKDNTLEKIMITNPRMDQEQLSKINPPAVISMPRAAMAKLINHNRIVAIASVPKFSICTCSGNMSVEIHNTNPEMIRFNNRLMR	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247	GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad_CDS_0001	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	genomad	CDS	161393	162502	GCA_004138395.1	PRLM01000001.1	GCA_004138395.1|PRLM01000001.1	GCA_004138395.1_PRLM01000001.1	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247_159	1110	1	0.419	11					0	0	0	1						GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	GCA_004138395.1|PRLM01000001.1	159	2	367	1476	MLAQLVERLNGIEEVRSSILLHSTIINLMVDFYMQTILTGIRSNSVLTLGNYLGALLPMVRLANKHSESYNINIFVPDLHSIISDVDGDLRENIIRTIKYYLAVGLKVNENVHIYRQSYVPAHSELCWILNCVATMGETSRMIQYKEKSKGQESCNVGIFDYPILMAADILLYDATYVPIGEDQFQHIELTRNLAMRFNNRFGEIFTVPAKTSEQIKFMGVSDGIRIRDLLNPEKKMSKSTKAENSKIMLDDEPAKAAKKIMSATTDSLGKIKFDMFNQPGVSNLLQIEALVNDAPLQDVISVWAGETRYGELKKKVAESVSGMLTDFQAKLAGISDEQVYELLENGEKYSNEVAGAKLLEVQKAFHLR	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247	GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad_CDS_0002	persistent	indirect	.	.	.	GCA_001837775.1_00084
GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	genomad	CDS	162559	163365	GCA_004138395.1	PRLM01000001.1	GCA_004138395.1|PRLM01000001.1	GCA_004138395.1_PRLM01000001.1	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247_160	807	-1	0.465	11	GGAGG				0	0	0	1						GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	GCA_004138395.1|PRLM01000001.1	160	3	1533	2339	MTFYEQREEIIAKLPKAERDKRRRQLEQSDIKVAKMRTRLKVHFDDLGLEQSMDALGYMCEKHGDQIRKNGEQYISHPLSMACTFQCLKIPNDDIFATLLLHDVIEESAPDGTRLFTSEVAKLAEDLPVGPVVKAAVRLMTLSRAYPGESDYEMKQRYIQQLIDEDKPENKVATIGKGLDRWNNITTMPELSQRAIRKNVLETSILLLPALKKAKTKWPREANILFLIRSTIKSMNNMLATYNGITDLHDENELKRLIEDKNYLNEQA	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247	GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad_CDS_0003	persistent	indirect	.	.	.	GCA_000242235.1_01053
GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	genomad	CDS	163432	164322	GCA_004138395.1	PRLM01000001.1	GCA_004138395.1|PRLM01000001.1	GCA_004138395.1_PRLM01000001.1	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247_161	891	1	0.435	11					0	0	0	1						GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	GCA_004138395.1|PRLM01000001.1	161	4	2406	3296	MIVTGKKFSKPEMSRVINGDRELAEVPEKPEKVRLDVLMGECYKSYNRSSLQKFIEFGFVTVNGEIAKKPNQKFERGVKIDLKIPETMKNADLVPEVIYEDKDVVVLNKPAGLLSMPRAQYCPEKTLENYGLLVHRLDRDTSGVVIMAKSPEVQAFLKKQFQDRTTHKTYYAVVSGQPKLGAAKIDLPIARDLKRPTTFRVDANGKDSETYYEVIKSNDKYSLIELKPTTGRTHQLRVHLKYLGHPILGDPLYGGEKAGRLYLHANKLEITLPNGKRMVFEAKMPKEFKDVFREGK	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247	GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad_CDS_0004	persistent	indirect	.	.	.	GCA_905371815.1_01462
GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	genomad	CDS	164300	164962	GCA_004138395.1	PRLM01000001.1	GCA_004138395.1|PRLM01000001.1	GCA_004138395.1_PRLM01000001.1	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247_162	663	1	0.406	11	GGA/GAG/AGG				0	0	0	1						GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	GCA_004138395.1|PRLM01000001.1	162	5	3274	3936	MFFEKVSEIFEIALKTGTAVFVVPKDVTVELKNAIVLRPEEKSVITIEQVRGVIGKISTRQTHDVFVLIRPADTMSEAAANAFLKSLEEPNEKVHFVLVTDSPSRILPTILSRAGVYFLRDTQFSEEKIEASEKDKALAKKLLVAKPSELVDVVEEICKKKGGVRAYAMEILRVAIEMLYKSYFLTKKETFIHKLPKFLQAYENVAKNGHVKLQIIACLC	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247	GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad_CDS_0005	persistent	indirect	.	.	.	GCA_000148565.2_00093
GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	genomad	CDS	164972	165745	GCA_004138395.1	PRLM01000001.1	GCA_004138395.1|PRLM01000001.1	GCA_004138395.1_PRLM01000001.1	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247_163	774	1	0.434	11					0	0	0	1						GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	GCA_004138395.1|PRLM01000001.1	163	6	3946	4719	MVAILAIFVFIVYLTFFFPLEPREKRVEEKSPKYTAQMKKLWQIAQTAMKERKPFRAEKALLTILKFDEKNAAAYNRLGILYAKGQKYDEAVECFEIAQSLDNNPASIHNVGLIYLETGAYEKAAMAFEQAIALEGDVPARYIALAKAEEKLGRTKKAVEALENAYELDPKATTLRQILAIYEADGNTEAATATAARIEEQIIKDNAAKVKRGAAKKRKITTMARKKSASVSKVIPKGSGAKPAPKVIKQHVGRRRI	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247	GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad_CDS_0006	persistent	indirect	.	.	.	GCA_005697215.1_00429
GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	genomad	CDS	166616	166993	GCA_004138395.1	PRLM01000001.1	GCA_004138395.1|PRLM01000001.1	GCA_004138395.1_PRLM01000001.1	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247_164	378	-1	0.429	11	4Base/6BMM				0	0	0	1						GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	GCA_004138395.1|PRLM01000001.1	164	7	5590	5967	MAKYDDFGFITELSENEIFVFGSNGQGAHFGGAAATAVHKFGAKMGQAEGLQGQSYAINTMDSEDEMFEQINRFLKFAEEHQELLFLVTEIGCGIAGYSPEQIAPAFEDCTGNVILPKAFLKVLQ	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247	GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad_CDS_0007	persistent	indirect	.	.	.	GCA_000613445.1_03010
GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	genomad	CDS	167009	167632	GCA_004138395.1	PRLM01000001.1	GCA_004138395.1|PRLM01000001.1	GCA_004138395.1_PRLM01000001.1	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247_165	624	-1	0.349	11					0	0	0	1						GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	GCA_004138395.1|PRLM01000001.1	165	8	5983	6606	MSYCNWNKTSEANRRYHDEEWGVPVFNDDRHQFEHLSMEVMQCGLSWDLMINRRDIFRKCFDNFEYEKIAKYDEEDIIRIMSTPNMIKSQRKIRAIINNARLFIKVREEFGSFCDYLWQNTDGKIILYDKHSDGHIPVSNGLSEKIGNDLRKRGFKYVGPITIYSHLQSIGLIHDHDKNCPRYKEILSKHDFVKKKRYLENKVTHYK	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247	GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad_CDS_0008	persistent	indirect	.	.	.	GCA_000248355.2_02587
GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	genomad	CDS	167654	169855	GCA_004138395.1	PRLM01000001.1	GCA_004138395.1|PRLM01000001.1	GCA_004138395.1_PRLM01000001.1	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247_166	2202	-1	0.459	11	GGAG/GAGG	GENOMAD.104623.VV	1.436e-27	123	0	0	0	1246	Caudoviricetes			PF05895	Siphovirus protein of unknown function (DUF859)	GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	GCA_004138395.1|PRLM01000001.1	166	9	6628	8829	MAWQTVATTALNDASATYGYVYLQYDDSSSGTSRSSRLRFEIRSGYSVYVYIDNLALDGGGVSGRFLCQGTMNFWTGSLANGTRTFTWSCPWYSGTRSYTCSGYIPSGVTAPSGLSVALNSKTYNSATLKVSISSYGVPSGVDGRYIEAAILNQNSYGASYRYAIARNTTSSTITVNNSSNANPSSFNIEGNHRYWYGGYATNTQASTSGVAGSFYTPCPPLATLAYASQVYSAYNKVNATISYMRSADGGAETRTGYYRYSTDGGTNYSSWISFGTISAAVGTNATFVANLPTDSTITLQAKINTPNGGDSTIKTITFTTIPTHEAPNFSDFEYRDTNATTTEMTGDDQAMIQGQSTPLVTISTANKATGNDGVNVSNYAITFVGQSKTVDYDDSSDVTATLDPPAESGTTNLTVSAIDALSTAKAVARQVTIYPWVKPTISASIQRVNNFESEAKLNASGTYSPILVNGVVKNTISLEYRTKKSSSSEWSNWTSRAVTISSANWSLSNLSITLDNNYQWDVQVRAVDSFSNTSTDLSVSIGMPNFFIGVDGRVSIGMRPSKTLASTDRGHLEVDGPVYSKGVPLVSSHVGQIIMTTTLNTAAKVQAIYGGTWVAWGAGRVPIGIGSNGTTNYSTVEATGGEEKHTLTIAEMPSHTHTQNSHSHTTYNKWNSYGAGDCSAYGYKSPANGSSQDGWQQDYTGGTTATNQNTGGGGSHENRQPYITVYMWKRTA	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247	GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad_CDS_0009	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	genomad	CDS	169855	171792	GCA_004138395.1	PRLM01000001.1	GCA_004138395.1|PRLM01000001.1	GCA_004138395.1_PRLM01000001.1	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247_167	1938	-1	0.422	11	GGA/GAG/AGG	GENOMAD.005696.VV	1.164e-33	142	0	0	0	1246	Caudoviricetes					GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	GCA_004138395.1|PRLM01000001.1	167	10	8829	10766	MIEVTEAFKNVARAPVKTIRVKIACDGHDYTSADDFVSLTKEDIGNYFGVATKSLSFKLLGTAYNLIGKTAEVSFEIQTENDWESCTLGQFVIYEQTVNLEKDTTDFKAYDQMGVMGKVAYEAGNLTFPCTVENLFEQISDRFGLARYATNVANLSYEITEDLYARINGTTFRDILAEIAGTTASLCEVTYNSIKLRPIEMLPTETLTYANLKKAKLEPKYGPVNSVVLARTPAEDNIIVTDEESIAENGRTEIKLANNEILDDDRETLAQPILDEADGFYYYPFEITTEGHGWYEIGDRLSITDGTNTWEIIVTAISLKIGPGMTEVLKGIAPTETQTNYALAGGITKTIYNTEIKVDKQGQEIQSIVEEQSILENQVNENYTTITQTISNVVTSVQNSGGNNLLKNSAMYALDDNGLPVSWVLSGSGTINITPSAEAAVNGSLSRQNISLKDMTVSQVVEVKADNSSIADKTYYSFSCKIKKTAVGECLVRIADGTETGVWEISLNNGDESFYDEHSIEGILPNSSNLTISVYGSADSEFSINDMMLAVGDYKTQWTQANGEFANTQVAIDSTGVTIRSSTLNGTYTKQTPQELNAYSNNVLAATINNEGLVAPKAEFTNEIAMSPIKIVPQNDGWAFVRSEN	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247	GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad_CDS_0010	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	genomad	CDS	171789	172154	GCA_004138395.1	PRLM01000001.1	GCA_004138395.1|PRLM01000001.1	GCA_004138395.1_PRLM01000001.1	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247_168	366	-1	0.432	11	GGAG/GAGG	GENOMAD.026825.VV	3.37e-48	168	0	0	0	1246	Caudoviricetes			PF20458		GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	GCA_004138395.1|PRLM01000001.1	168	11	10763	11128	MIGTLLQINGQTIPNIKSYKVGNNKLWADAERNMNGDVRATFIGVFPKIELEIGGVLTSAIVANLCNLLDQPYFSVTFYDPKTRTNRTAQYYASDYTVELMDKYRELYQPFTVNLIPVSKR	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247	GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad_CDS_0011	shell	indirect	.	.	.	GCA_013333155.2_00542
GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	genomad	CDS	172151	175141	GCA_004138395.1	PRLM01000001.1	GCA_004138395.1|PRLM01000001.1	GCA_004138395.1_PRLM01000001.1	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247_169	2991	-1	0.468	11	GGAG/GAGG	GENOMAD.092894.VV	1.607e-46	186	0	0	0	1246	Caudoviricetes					GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	GCA_004138395.1|PRLM01000001.1	169	12	11125	14115	MAMTVDELQVLITAQTSKFNSEIAKVQSQISGLDKNVKNSSTNMTKGFGSLAAKVVSVGAIIKATASSITAAMNYIEDENLFQVSMGKWADATREWSKQVQDSVGVSGAWLRKYSGVMTNMTASMGIAQDEAVKLGKGIALLSNDIASFYNISPESAFEKIQSAMAGMPRPLQELGIMVRDSEVKQVAYANGIARTGDELNTQQKALATYLAILQRTSNAQGDLARTINSPANQMRMLKTSIIDLGVAIGNMFQPLLSVVLPVLNAIVIATTRAFQAIARLFGIEFDASAYAQDFSDISTGIGSVGDAADSSSGKVKKLAKQLAAFDEMNTLNAPDDSSSGGSSGGGGGGTIDLPKIDWDSLYSGNFDKITNKALEMADRIYKAFEKMGKKLNNTFKKIEWEKISKGLNEVWEALKPFGDRIGAGLEWLYDNVLEPLTLWAMNDFIPAAFHAIAGALNLIGAVIDACAPTFAWLFDNFLRPIAEFTGGIIVSVLQGIGDMLNWIAQQQAVVELIKNIALTIGIMVAAWEAYQLIAGIVTGIQIAMTGAMVAGTTASGAYAVGLGVVTAAQSACATAGQILNAVFSTTSIVGLAITAVLTGISVVNEALKLSTMEAELAERNRMDTVKLSTQTTEWHNEAIQRQKELIDELEDAELNAVDSELAYINAQEQATKKREKYNEMLNAGTYSTDELHKAELEALSAEGRATAAKEKLAEAQQTVTDKTEEYGNMEWKRIMTEKQAELLDLAKAGRYEDINQKLLELGTSTIEYKDAHGKMVKFTEEDAENMALFIGDQLAKADEGYKKFWNSSTDSIKEAVKVADAVEPQFEQSGRSFAGGIATGINQNSWQVSNAAKNSALAAKNTFNSTLQIKSPSRVMKKSGGFFVAGIAGGIAESIHDAESEVVYMANKLTGAVDEVFSGYEIADIGQNMDIGANIGSDIDARLRQSELRREMQEKDDEEEPIALTVKIGEDTILDKIVSGINEKSFMNNMGVISI	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247	GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad_CDS_0012	shell	indirect	.	.	.	GCA_013333155.2_00646
GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	genomad	CDS	175418	175795	GCA_004138395.1	PRLM01000001.1	GCA_004138395.1|PRLM01000001.1	GCA_004138395.1_PRLM01000001.1	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247_170	378	-1	0.421	11	GGA/GAG/AGG				0	0	0	1						GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	GCA_004138395.1|PRLM01000001.1	170	13	14392	14769	MSNKLNLKFTARDVAAVEEALDGSLEKIIASFKLTTLIQFLMVGLRDKSGNRLNLDEEKTFDIVDEKIKEYGKIELQIEVIDALIEAGFLPRAIDTNQMRTTLSEAIAEASKIPEASKKAGENTK	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247	GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad_CDS_0013	infer_flexible	indirect	.	.	.	no_good_uniDB_hits
GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	genomad	CDS	175822	176247	GCA_004138395.1	PRLM01000001.1	GCA_004138395.1|PRLM01000001.1	GCA_004138395.1_PRLM01000001.1	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247_171	426	-1	0.498	11	GGAG/GAGG	GENOMAD.055210.VV	1.245e-43	156	0	0	1	1246	Caudoviricetes			PF16463;COG5437	Phage tail tube protein family	GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad	GCA_004138395.1|PRLM01000001.1	171	14	14796	15221	MAGTRTMGTTLTMKKAGDEQADTVIAHLTSIGEVNGEREEIDVTTLDSPNGAKEFIAGVVDFGSFDIAGNIIDGVQVSALYDVFNGQQNRDFVIETPSGTKLALNGYFSAFGFGEKTTDGLDTFKATVRVSGAPEYTPANV	GCA_004138395.1|PRLM01000001.1|provirus_161027_176247	GCA_004138395.1|PRLM01000001.1@region_161027_176247@tool_genomad_CDS_0014	shell	indirect	.	.	.	GCA_013333155.2_00644