core_seqid core_source core_type core_start core_end core_score core_strand core_phase core_ID core_Parent core_locus_tag core_product core_note core_bax_acc core_contig_acc core_bax_acc|contig_acc core_bax_acc_contig_acc core_protein_translation ppanggolin_partition bakta_Length bakta_Gene bakta_Product bakta_EC bakta_GO bakta_COG bakta_RefSeq bakta_UniParc bakta_UniRef cenote_phage_hit cenote_UNI_lookup_ID cenote_pangenome_partition genomad_phage_hit genomad_UNI_lookup_ID genomad_pangenome_partition phage_indicator_code GCA_005502385.1|SCOV01000001.1 prokka gene 658 933 . + . GCA_005502385.1_00530_gene GCA_005502385.1_00530 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPNLITKNHKSFNKDEEITKNKQTHHDAKFEKGVITHQHQPSQSNSTQKNKKHNQKRKNQNQKNKNKNKTPKQQQRAEKANSKIEKRTFND . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 658 933 . + . GCA_005502385.1_00530_mRNA GCA_005502385.1_00530 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPNLITKNHKSFNKDEEITKNKQTHHDAKFEKGVITHQHQPSQSNSTQKNKKHNQKRKNQNQKNKNKNKTPKQQQRAEKANSKIEKRTFND . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 658 933 . + 0 GCA_005502385.1_00530 GCA_005502385.1_00530_gene,GCA_005502385.1_00530_mRNA GCA_005502385.1_00530 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPNLITKNHKSFNKDEEITKNKQTHHDAKFEKGVITHQHQPSQSNSTQKNKKHNQKRKNQNQKNKNKNKTPKQQQRAEKANSKIEKRTFND persistent 91 hypothetical protein WP_049382565.1 UPI00066C9DD4 UniRef100_UPI00066C9DD4,UniRef50_A0AAE5JPB7,UniRef90_A0AAE5JPB7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 1155 2246 . + . GCA_005502385.1_00531_gene GCA_005502385.1_00531 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSTKLEQYREEIISINNQILDLLSKRGELAQKIGEEKIKQGTKVYDPQREKEMINELMDRNNGPFNDNVIKQLFKEIFKASTDLQKSENEKHLYVSRKLKPEDTIVKFDNGGVIGDGNKSFVFGPCSVESQEQVDAVARDLQAKGEKFIRGGAFKPRTSPYDFQGLGIEGLKILKNVKDKFNLNIVSEIVNPADFEIADEYLDVFQIGARNMQNFELLKEAGRTNKPILLKRGLSATIEEFTFAAEYIASQGNKNIILCERGIRTYEKATRNTLDISAVPILKQGTHLPVMVDVTHSTGRKDIMLPTAKAALAVGADGVMAEVHPNPSVALSDSGQQMDLNEFDKFYNELKPLADMYNSKQLK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 1155 2246 . + . GCA_005502385.1_00531_mRNA GCA_005502385.1_00531 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSTKLEQYREEIISINNQILDLLSKRGELAQKIGEEKIKQGTKVYDPQREKEMINELMDRNNGPFNDNVIKQLFKEIFKASTDLQKSENEKHLYVSRKLKPEDTIVKFDNGGVIGDGNKSFVFGPCSVESQEQVDAVARDLQAKGEKFIRGGAFKPRTSPYDFQGLGIEGLKILKNVKDKFNLNIVSEIVNPADFEIADEYLDVFQIGARNMQNFELLKEAGRTNKPILLKRGLSATIEEFTFAAEYIASQGNKNIILCERGIRTYEKATRNTLDISAVPILKQGTHLPVMVDVTHSTGRKDIMLPTAKAALAVGADGVMAEVHPNPSVALSDSGQQMDLNEFDKFYNELKPLADMYNSKQLK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 1155 2246 . + 0 GCA_005502385.1_00531 GCA_005502385.1_00531_gene,GCA_005502385.1_00531_mRNA GCA_005502385.1_00531 Protein AroA(G) GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSTKLEQYREEIISINNQILDLLSKRGELAQKIGEEKIKQGTKVYDPQREKEMINELMDRNNGPFNDNVIKQLFKEIFKASTDLQKSENEKHLYVSRKLKPEDTIVKFDNGGVIGDGNKSFVFGPCSVESQEQVDAVARDLQAKGEKFIRGGAFKPRTSPYDFQGLGIEGLKILKNVKDKFNLNIVSEIVNPADFEIADEYLDVFQIGARNMQNFELLKEAGRTNKPILLKRGLSATIEEFTFAAEYIASQGNKNIILCERGIRTYEKATRNTLDISAVPILKQGTHLPVMVDVTHSTGRKDIMLPTAKAALAVGADGVMAEVHPNPSVALSDSGQQMDLNEFDKFYNELKPLADMYNSKQLK persistent 363 aroGA bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase 2.5.1.54,5.4.99.5 GO:0003824,GO:0009073,GO:0046417 COG2876,E WP_019835463.1 UPI00035CACB5 UniRef100_UPI00035CACB5,UniRef50_P39912,UniRef90_A0A657ZU98 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 2510 3499 . + . GCA_005502385.1_00532_gene GCA_005502385.1_00532 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTVTIYDVAREARVSMATVSRVVNGNQNVKPETRKKVNDVIQRLNYRPNAVARGLASKRTTTVGVIIPDISNIYYSQLARGIEDIATMYKYHSIISNSDNDSEKEKEIFNNLLSKQVDGIIFLGGTISDEIKDLINHSSVPVVVSGTNGKDDNIASVNIDFAKAAREVTEQLIKTGAKDFVLVSGDYSKKAQEDVLSGLKDALNKHQLKLNNTIELSGSESYKDGVNVFEKLKNNLPDAILSISDEQAIGILHSALDAGIKVPEELQIVSFNNTRLVEMVRPKLSSVIQPLYDIGAVGMRLLTKFMNEEDIAEPNVVLPHRIEYRNTTN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 2510 3499 . + . GCA_005502385.1_00532_mRNA GCA_005502385.1_00532 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTVTIYDVAREARVSMATVSRVVNGNQNVKPETRKKVNDVIQRLNYRPNAVARGLASKRTTTVGVIIPDISNIYYSQLARGIEDIATMYKYHSIISNSDNDSEKEKEIFNNLLSKQVDGIIFLGGTISDEIKDLINHSSVPVVVSGTNGKDDNIASVNIDFAKAAREVTEQLIKTGAKDFVLVSGDYSKKAQEDVLSGLKDALNKHQLKLNNTIELSGSESYKDGVNVFEKLKNNLPDAILSISDEQAIGILHSALDAGIKVPEELQIVSFNNTRLVEMVRPKLSSVIQPLYDIGAVGMRLLTKFMNEEDIAEPNVVLPHRIEYRNTTN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 2510 3499 . + 0 GCA_005502385.1_00532 GCA_005502385.1_00532_gene,GCA_005502385.1_00532_mRNA GCA_005502385.1_00532 Catabolite control protein A GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTVTIYDVAREARVSMATVSRVVNGNQNVKPETRKKVNDVIQRLNYRPNAVARGLASKRTTTVGVIIPDISNIYYSQLARGIEDIATMYKYHSIISNSDNDSEKEKEIFNNLLSKQVDGIIFLGGTISDEIKDLINHSSVPVVVSGTNGKDDNIASVNIDFAKAAREVTEQLIKTGAKDFVLVSGDYSKKAQEDVLSGLKDALNKHQLKLNNTIELSGSESYKDGVNVFEKLKNNLPDAILSISDEQAIGILHSALDAGIKVPEELQIVSFNNTRLVEMVRPKLSSVIQPLYDIGAVGMRLLTKFMNEEDIAEPNVVLPHRIEYRNTTN persistent 329 ccpA catabolite control protein A GO:0001228,GO:0003677,GO:0005975,GO:0006355 WP_137689453.1 UPI0010F48777 UniRef100_UPI0010F48777,UniRef50_Q5HNH3,UniRef90_A0A974KYF5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 3748 5415 . + . GCA_005502385.1_00533_gene GCA_005502385.1_00533 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAHLSDLDIANQSELKSIGDIAKKAGIPEHALEQYGHYKAKIDINQIQSRDEKGKVVLVTAMSPTPAGEGKSTVTVGLADAFNELNKNVMVALREPALGPTFGIKGGATGGGYAQVLPMEDINLHFNGDFHAITTANNALSAFIDNHIHQGNDLAIDVRRVEWKRVLDMNDRALRNVIVGLGGPTNGVPREDGFNITVASEIMAILCLARNINDLKEKISRITVGYTRERKPITVADLKVEGALAMILKDAIKPNLVQTIEGTPALVHGGPFANIAHGCNSILATETARDLADIVVTEAGFGSDLGAEKFIDIKAREAGFEPSAVVLVATVRALKMHGGVAKDNLKEENVEAVKAGIVNLERHVNNIRKFGVEPVVALNAFVHDTEDETEAVKAWAKENNVRIALTEVWEKGGKGGVDLANQVLEVIDQPQEFKFLYDLDQSLEEKIETIVKEIYGGSSVTFSKKAKRQLKEFTDNGWGKYPICMAKTQYSFSDDATALGAPTDFDITIRELEAKTGAGFIVALTGAIMTMPGLPKKPAALNMDVTDEGHAVGLF . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 3748 5415 . + . GCA_005502385.1_00533_mRNA GCA_005502385.1_00533 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAHLSDLDIANQSELKSIGDIAKKAGIPEHALEQYGHYKAKIDINQIQSRDEKGKVVLVTAMSPTPAGEGKSTVTVGLADAFNELNKNVMVALREPALGPTFGIKGGATGGGYAQVLPMEDINLHFNGDFHAITTANNALSAFIDNHIHQGNDLAIDVRRVEWKRVLDMNDRALRNVIVGLGGPTNGVPREDGFNITVASEIMAILCLARNINDLKEKISRITVGYTRERKPITVADLKVEGALAMILKDAIKPNLVQTIEGTPALVHGGPFANIAHGCNSILATETARDLADIVVTEAGFGSDLGAEKFIDIKAREAGFEPSAVVLVATVRALKMHGGVAKDNLKEENVEAVKAGIVNLERHVNNIRKFGVEPVVALNAFVHDTEDETEAVKAWAKENNVRIALTEVWEKGGKGGVDLANQVLEVIDQPQEFKFLYDLDQSLEEKIETIVKEIYGGSSVTFSKKAKRQLKEFTDNGWGKYPICMAKTQYSFSDDATALGAPTDFDITIRELEAKTGAGFIVALTGAIMTMPGLPKKPAALNMDVTDEGHAVGLF . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 3748 5415 . + 0 GCA_005502385.1_00533 GCA_005502385.1_00533_gene,GCA_005502385.1_00533_mRNA GCA_005502385.1_00533 Formate--tetrahydrofolate ligase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAHLSDLDIANQSELKSIGDIAKKAGIPEHALEQYGHYKAKIDINQIQSRDEKGKVVLVTAMSPTPAGEGKSTVTVGLADAFNELNKNVMVALREPALGPTFGIKGGATGGGYAQVLPMEDINLHFNGDFHAITTANNALSAFIDNHIHQGNDLAIDVRRVEWKRVLDMNDRALRNVIVGLGGPTNGVPREDGFNITVASEIMAILCLARNINDLKEKISRITVGYTRERKPITVADLKVEGALAMILKDAIKPNLVQTIEGTPALVHGGPFANIAHGCNSILATETARDLADIVVTEAGFGSDLGAEKFIDIKAREAGFEPSAVVLVATVRALKMHGGVAKDNLKEENVEAVKAGIVNLERHVNNIRKFGVEPVVALNAFVHDTEDETEAVKAWAKENNVRIALTEVWEKGGKGGVDLANQVLEVIDQPQEFKFLYDLDQSLEEKIETIVKEIYGGSSVTFSKKAKRQLKEFTDNGWGKYPICMAKTQYSFSDDATALGAPTDFDITIRELEAKTGAGFIVALTGAIMTMPGLPKKPAALNMDVTDEGHAVGLF persistent 555 fhs formate--tetrahydrofolate ligase 6.3.4.3 GO:0004329,GO:0005524,GO:0035999 COG2759,F UniRef50_Q5HF42,UniRef90_Q4L776 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 5687 6574 . - . GCA_005502385.1_00534_gene GCA_005502385.1_00534 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKLLFKDIQFKTFEKNYKFIKHIMVGLLSIIVLGSILIVLGTATYFHHLTQEASNISDTELKHRVLHFSGDEILNHDKNILTEYDHSQNSLIVGPKHVNSNVIKALISSEDTLFFKHDGILPKALIRAMIQDVLSLNSRSGGSTITQQLIKNQVLTNEKTYSRKANEIILAMRLEKILSKNEIIYTYLNIVPFGRDYNGANITGIASASYSLFNVPPSKLNVAQSAYLVGLLQSPYTYTPYENNGDLKAYNEVKISIDRQHYVLKRMLVEGVITKKTYQQAKQYTIYDHLLTKPQ . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 5687 6574 . - . GCA_005502385.1_00534_mRNA GCA_005502385.1_00534 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKLLFKDIQFKTFEKNYKFIKHIMVGLLSIIVLGSILIVLGTATYFHHLTQEASNISDTELKHRVLHFSGDEILNHDKNILTEYDHSQNSLIVGPKHVNSNVIKALISSEDTLFFKHDGILPKALIRAMIQDVLSLNSRSGGSTITQQLIKNQVLTNEKTYSRKANEIILAMRLEKILSKNEIIYTYLNIVPFGRDYNGANITGIASASYSLFNVPPSKLNVAQSAYLVGLLQSPYTYTPYENNGDLKAYNEVKISIDRQHYVLKRMLVEGVITKKTYQQAKQYTIYDHLLTKPQ . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 5687 6574 . - 0 GCA_005502385.1_00534 GCA_005502385.1_00534_gene,GCA_005502385.1_00534_mRNA GCA_005502385.1_00534 Penicillin-binding protein 1A GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKLLFKDIQFKTFEKNYKFIKHIMVGLLSIIVLGSILIVLGTATYFHHLTQEASNISDTELKHRVLHFSGDEILNHDKNILTEYDHSQNSLIVGPKHVNSNVIKALISSEDTLFFKHDGILPKALIRAMIQDVLSLNSRSGGSTITQQLIKNQVLTNEKTYSRKANEIILAMRLEKILSKNEIIYTYLNIVPFGRDYNGANITGIASASYSLFNVPPSKLNVAQSAYLVGLLQSPYTYTPYENNGDLKAYNEVKISIDRQHYVLKRMLVEGVITKKTYQQAKQYTIYDHLLTKPQ persistent 295 Penicillin-binding protein 2.4.99.28 WP_002448304.1 UPI00019FCA67 UniRef100_UPI00019FCA67,UniRef50_G5JFR8,UniRef90_A0A3S7GZX2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 6920 8182 . + . GCA_005502385.1_00535_gene GCA_005502385.1_00535 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSNALLEELQWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFMTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEDQVAKNVEGLSAQMHKLFEFGTDKGAVLVNNKDWLSQISLISFLRDYGKHVGVNYMLGKDSIQSRLENGISYTEFTYTILQAIDFGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVWLDAEKTTPYEFYQFWINQSDEDVIKFLKYFTFLSKEDINRLEQSRDEAPHLREAQKALAENVTEFIHGKEALDDAIRISEALFKGDLKSLSSKDIKAGFKEVPQVEVSKATTNIIDVLIESRIASSKRQAREDVNNGAIYINGEREQSVDYNLTDEDKFDNEFTIIRRGKKKYFMVNYK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 6920 8182 . + . GCA_005502385.1_00535_mRNA GCA_005502385.1_00535 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSNALLEELQWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFMTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEDQVAKNVEGLSAQMHKLFEFGTDKGAVLVNNKDWLSQISLISFLRDYGKHVGVNYMLGKDSIQSRLENGISYTEFTYTILQAIDFGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVWLDAEKTTPYEFYQFWINQSDEDVIKFLKYFTFLSKEDINRLEQSRDEAPHLREAQKALAENVTEFIHGKEALDDAIRISEALFKGDLKSLSSKDIKAGFKEVPQVEVSKATTNIIDVLIESRIASSKRQAREDVNNGAIYINGEREQSVDYNLTDEDKFDNEFTIIRRGKKKYFMVNYK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 6920 8182 . + 0 GCA_005502385.1_00535 GCA_005502385.1_00535_gene,GCA_005502385.1_00535_mRNA GCA_005502385.1_00535 Tyrosine--tRNA ligase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSNALLEELQWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFMTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEDQVAKNVEGLSAQMHKLFEFGTDKGAVLVNNKDWLSQISLISFLRDYGKHVGVNYMLGKDSIQSRLENGISYTEFTYTILQAIDFGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVWLDAEKTTPYEFYQFWINQSDEDVIKFLKYFTFLSKEDINRLEQSRDEAPHLREAQKALAENVTEFIHGKEALDDAIRISEALFKGDLKSLSSKDIKAGFKEVPQVEVSKATTNIIDVLIESRIASSKRQAREDVNNGAIYINGEREQSVDYNLTDEDKFDNEFTIIRRGKKKYFMVNYK persistent 420 tyrS tyrosine--tRNA ligase 6.1.1.1 GO:0000166,GO:0004831,GO:0005524,GO:0006437 WP_133945537.1 UPI0010643DA9 UniRef100_UPI0010643DA9,UniRef50_P0DM33,UniRef90_A0A3S7H0S7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 8249 9505 . - . GCA_005502385.1_00536_gene GCA_005502385.1_00536 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEYNQYFQSSDYQHSRPPKPKFPWFRIIIIALIAGIIGALIVLGVNRLMNGDDSNSGGSQVQQATNDKGGNVLDGKSDKYKSVNAMIKDVSPAIVGVINMQKATSFDDLLQGKSTKAQEAGIGSGVIYQINNNSAYIVTNNHVIDGASQIKVQLHNGKQVEAKLVGTDAVSDIAVLKIDSQKGIKAMKFANSSKVQTGDSVFAMGNPLGLEFANSVTSGIISANERTIESNTTSGGTKVNVLQTDAAINPGNSGGALVDVNGNLVGINSMKIAADQVEGIGFAIPSNEVRVTIEQLVKHGKVERPSIGIGLLNLSDIPDSYKKELKTDRDTGVYIAKVSHSSELKVGDIITKVDSKKVDDDTDLRTYLYQNKKPGETVKLTVIRDGKTKDVSVTLKNQKSISSQSYNSEDNNSQFIR . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 8249 9505 . - . GCA_005502385.1_00536_mRNA GCA_005502385.1_00536 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEYNQYFQSSDYQHSRPPKPKFPWFRIIIIALIAGIIGALIVLGVNRLMNGDDSNSGGSQVQQATNDKGGNVLDGKSDKYKSVNAMIKDVSPAIVGVINMQKATSFDDLLQGKSTKAQEAGIGSGVIYQINNNSAYIVTNNHVIDGASQIKVQLHNGKQVEAKLVGTDAVSDIAVLKIDSQKGIKAMKFANSSKVQTGDSVFAMGNPLGLEFANSVTSGIISANERTIESNTTSGGTKVNVLQTDAAINPGNSGGALVDVNGNLVGINSMKIAADQVEGIGFAIPSNEVRVTIEQLVKHGKVERPSIGIGLLNLSDIPDSYKKELKTDRDTGVYIAKVSHSSELKVGDIITKVDSKKVDDDTDLRTYLYQNKKPGETVKLTVIRDGKTKDVSVTLKNQKSISSQSYNSEDNNSQFIR . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 8249 9505 . - 0 GCA_005502385.1_00536 GCA_005502385.1_00536_gene,GCA_005502385.1_00536_mRNA GCA_005502385.1_00536 Serine protease Do-like HtrA GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEYNQYFQSSDYQHSRPPKPKFPWFRIIIIALIAGIIGALIVLGVNRLMNGDDSNSGGSQVQQATNDKGGNVLDGKSDKYKSVNAMIKDVSPAIVGVINMQKATSFDDLLQGKSTKAQEAGIGSGVIYQINNNSAYIVTNNHVIDGASQIKVQLHNGKQVEAKLVGTDAVSDIAVLKIDSQKGIKAMKFANSSKVQTGDSVFAMGNPLGLEFANSVTSGIISANERTIESNTTSGGTKVNVLQTDAAINPGNSGGALVDVNGNLVGINSMKIAADQVEGIGFAIPSNEVRVTIEQLVKHGKVERPSIGIGLLNLSDIPDSYKKELKTDRDTGVYIAKVSHSSELKVGDIITKVDSKKVDDDTDLRTYLYQNKKPGETVKLTVIRDGKTKDVSVTLKNQKSISSQSYNSEDNNSQFIR persistent 418 Serine protease HtrA-like WP_002455201.1 UPI0001EF51E6 UniRef100_A0A974QP88,UniRef50_A0A239Z1D6,UniRef90_A0A974QP88 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 9673 10290 . + . GCA_005502385.1_00537_gene GCA_005502385.1_00537 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYKFISKFLELIIVKTARSLHIVGKENIPKDSKYVVTCTHESYNEVILLGLALIPNEIHYMAKKELFSNKWGGKFLRSLNAFPVDRENPGPSTLKQPVKLLKDHKTVGIFPTGHRTSVEGAPLKRGAATIAMLGKAPILPAAYVGPTKLHGLVTGQAMIKFGKPIYQSDIPKDLKRNEKIDFLTKEIERRTAQLQHELHLIQERL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 9673 10290 . + . GCA_005502385.1_00537_mRNA GCA_005502385.1_00537 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYKFISKFLELIIVKTARSLHIVGKENIPKDSKYVVTCTHESYNEVILLGLALIPNEIHYMAKKELFSNKWGGKFLRSLNAFPVDRENPGPSTLKQPVKLLKDHKTVGIFPTGHRTSVEGAPLKRGAATIAMLGKAPILPAAYVGPTKLHGLVTGQAMIKFGKPIYQSDIPKDLKRNEKIDFLTKEIERRTAQLQHELHLIQERL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 9673 10290 . + 0 GCA_005502385.1_00537 GCA_005502385.1_00537_gene,GCA_005502385.1_00537_mRNA GCA_005502385.1_00537 1-acyl-sn-glycerol-3-phosphate acyltransferase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYKFISKFLELIIVKTARSLHIVGKENIPKDSKYVVTCTHESYNEVILLGLALIPNEIHYMAKKELFSNKWGGKFLRSLNAFPVDRENPGPSTLKQPVKLLKDHKTVGIFPTGHRTSVEGAPLKRGAATIAMLGKAPILPAAYVGPTKLHGLVTGQAMIKFGKPIYQSDIPKDLKRNEKIDFLTKEIERRTAQLQHELHLIQERL persistent 205 1-acyl-sn-glycerol-3-phosphate acyltransferase WP_133945535.1 UPI00106248C6 UniRef100_UPI00106248C6,UniRef50_A0A1D4JQG0,UniRef90_A0A533ISN2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 10756 11232 . + . GCA_005502385.1_00538_gene GCA_005502385.1_00538 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFKFFQNLGRSLMLPVAVLPAGAIITGIGNLLYALHVLPTVAMFFSIVGTAILGQLGLIFAIGVAIGMAKKNDGAVALAGALGYAMVTKVLNPENVATLFNIKEKAVNLGFTKMDNSNVFLGIIIGLIAAYSFNKFSEVELPMALSFFSGKTYYDCIF . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 10756 11232 . + . GCA_005502385.1_00538_mRNA GCA_005502385.1_00538 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFKFFQNLGRSLMLPVAVLPAGAIITGIGNLLYALHVLPTVAMFFSIVGTAILGQLGLIFAIGVAIGMAKKNDGAVALAGALGYAMVTKVLNPENVATLFNIKEKAVNLGFTKMDNSNVFLGIIIGLIAAYSFNKFSEVELPMALSFFSGKTYYDCIF . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 10756 11232 . + 0 GCA_005502385.1_00538 GCA_005502385.1_00538_gene,GCA_005502385.1_00538_mRNA GCA_005502385.1_00538 PTS system glucose-specific EIICBA component GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFKFFQNLGRSLMLPVAVLPAGAIITGIGNLLYALHVLPTVAMFFSIVGTAILGQLGLIFAIGVAIGMAKKNDGAVALAGALGYAMVTKVLNPENVATLFNIKEKAVNLGFTKMDNSNVFLGIIIGLIAAYSFNKFSEVELPMALSFFSGKTYYDCIF persistent 158 hypothetical protein . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 11216 12208 . + . GCA_005502385.1_00539_gene GCA_005502385.1_00539 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTVFFSTILAVILLFIWPMVFSGIVAFGEWLVGFGSFGAFLYGVFNRLLIPTGLHHALNAVFWFDTAGINDIGKFQTGVDAVKGITGRYQAGFFPIMMFGIPAAALAMYHSAETKQQKQVWGWFLASAISAFVVGVTEPIEFAFMFVAPVLFIIHALLTGLSLFIASLFQWTAGFSFSAGLIDYVLSLINPVANHPLMLLVQGIVFFILYYVIFRIMIKVLNLNTIGRGDNLLADPIVEETTTIDKSKSGKYHQPATQILEGLGGKSNIDSLTNCATRLRLELKDNTIIDEQKIRNAGAVGVTKNGHHSTQVIIGTHVQQVADEIEKQMK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 11216 12208 . + . GCA_005502385.1_00539_mRNA GCA_005502385.1_00539 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTVFFSTILAVILLFIWPMVFSGIVAFGEWLVGFGSFGAFLYGVFNRLLIPTGLHHALNAVFWFDTAGINDIGKFQTGVDAVKGITGRYQAGFFPIMMFGIPAAALAMYHSAETKQQKQVWGWFLASAISAFVVGVTEPIEFAFMFVAPVLFIIHALLTGLSLFIASLFQWTAGFSFSAGLIDYVLSLINPVANHPLMLLVQGIVFFILYYVIFRIMIKVLNLNTIGRGDNLLADPIVEETTTIDKSKSGKYHQPATQILEGLGGKSNIDSLTNCATRLRLELKDNTIIDEQKIRNAGAVGVTKNGHHSTQVIIGTHVQQVADEIEKQMK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 11216 12208 . + 0 GCA_005502385.1_00539 GCA_005502385.1_00539_gene,GCA_005502385.1_00539_mRNA GCA_005502385.1_00539 PTS system N-acetylglucosamine-specific EIICB component GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTVFFSTILAVILLFIWPMVFSGIVAFGEWLVGFGSFGAFLYGVFNRLLIPTGLHHALNAVFWFDTAGINDIGKFQTGVDAVKGITGRYQAGFFPIMMFGIPAAALAMYHSAETKQQKQVWGWFLASAISAFVVGVTEPIEFAFMFVAPVLFIIHALLTGLSLFIASLFQWTAGFSFSAGLIDYVLSLINPVANHPLMLLVQGIVFFILYYVIFRIMIKVLNLNTIGRGDNLLADPIVEETTTIDKSKSGKYHQPATQILEGLGGKSNIDSLTNCATRLRLELKDNTIIDEQKIRNAGAVGVTKNGHHSTQVIIGTHVQQVADEIEKQMK persistent 330 PTS transporter subunit EIIC UniRef50_UPI0004513E9E . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 12404 13531 . + . GCA_005502385.1_00540_gene GCA_005502385.1_00540 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKSILFDVDGVFLSEERCFDVSALTVEELLKSDDFLGLDSAQNFNYMNDELIEDIRTRVFLNDQILNQLKSLGLNSNWDMLFVVFSIHFIHLLKQLDSETIRQVTHVETFSVETLRELQSYNDQFKVNYAVPLKFIQNSQSGKENIYLELEGYAKDQLNIENAKLFNLKSPLWNLARAVYQEWYLGTTLYEKVEKLTPLSIPKSGFIYEEMILRPVEEIKTLLNDIKQAGFNIAIATGRPRTETIVPFESFGLKTFFNEKHIVTASEVLKAESVFPKEGSLGKPNPFSYIATLYGNNERDYLHYIQNQTHIVNEDDVFIVGDSLADLLCAKTIGATFIGTLTGLSGKGAKEELEQHGADYIVNHICDIRHILLNK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 12404 13531 . + . GCA_005502385.1_00540_mRNA GCA_005502385.1_00540 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKSILFDVDGVFLSEERCFDVSALTVEELLKSDDFLGLDSAQNFNYMNDELIEDIRTRVFLNDQILNQLKSLGLNSNWDMLFVVFSIHFIHLLKQLDSETIRQVTHVETFSVETLRELQSYNDQFKVNYAVPLKFIQNSQSGKENIYLELEGYAKDQLNIENAKLFNLKSPLWNLARAVYQEWYLGTTLYEKVEKLTPLSIPKSGFIYEEMILRPVEEIKTLLNDIKQAGFNIAIATGRPRTETIVPFESFGLKTFFNEKHIVTASEVLKAESVFPKEGSLGKPNPFSYIATLYGNNERDYLHYIQNQTHIVNEDDVFIVGDSLADLLCAKTIGATFIGTLTGLSGKGAKEELEQHGADYIVNHICDIRHILLNK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 12404 13531 . + 0 GCA_005502385.1_00540 GCA_005502385.1_00540_gene,GCA_005502385.1_00540_mRNA GCA_005502385.1_00540 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKSILFDVDGVFLSEERCFDVSALTVEELLKSDDFLGLDSAQNFNYMNDELIEDIRTRVFLNDQILNQLKSLGLNSNWDMLFVVFSIHFIHLLKQLDSETIRQVTHVETFSVETLRELQSYNDQFKVNYAVPLKFIQNSQSGKENIYLELEGYAKDQLNIENAKLFNLKSPLWNLARAVYQEWYLGTTLYEKVEKLTPLSIPKSGFIYEEMILRPVEEIKTLLNDIKQAGFNIAIATGRPRTETIVPFESFGLKTFFNEKHIVTASEVLKAESVFPKEGSLGKPNPFSYIATLYGNNERDYLHYIQNQTHIVNEDDVFIVGDSLADLLCAKTIGATFIGTLTGLSGKGAKEELEQHGADYIVNHICDIRHILLNK persistent 375 HAD family hydrolase WP_017176104.1 UPI0002E3BB3A UniRef100_A0A3S7GXB5,UniRef50_A0A6N3EB75,UniRef90_A0A974QP66 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 13579 15174 . - . GCA_005502385.1_00541_gene GCA_005502385.1_00541 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTHNILVSDPISEKGLQSLIHHPDFNVDFKSGLTEKELVDIIPNYQGLIVRSQTQVTESIINHASNLKVIARAGVGVDNIDIKSATLNGILVVNAPDGNTISATEHSVAMILAMARNIPQAYTSLKNKEWNRKAFKGVELYQKVLGVIGAGRIGLGVAKRLKSFGMTVLAYDPFLTKEKAEQLGIELATIDEIAQRSDFVTVHTPLTPKTKGIIDAHFFNQAKPTLQIINVARGGIINENDLLNALNQHQIARAALDVFENEPPLDSPLLDHKNIIVTPHLGASTIEAQEKVAVSVAEEIIDILENGNVTNAVNAPKLNLNHIDEKTQQWLRISQLSGELAIQLLDDAPREIKVTFNGEHAKKEADLITRSIVTSILKQNLGERVNLINAIALLNEQGITHHIENRASQGTFSNYIQINLISEHEEVKIGATVIDGFGARIVRINDYSVDFKPNAYQFISYHKDLPGMVGLTGQLLGKHDINIASMSLGRSSEGGQAMMILSVDQPITQQVIKELYEIGDFDKIYGTTLSI . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 13579 15174 . - . GCA_005502385.1_00541_mRNA GCA_005502385.1_00541 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTHNILVSDPISEKGLQSLIHHPDFNVDFKSGLTEKELVDIIPNYQGLIVRSQTQVTESIINHASNLKVIARAGVGVDNIDIKSATLNGILVVNAPDGNTISATEHSVAMILAMARNIPQAYTSLKNKEWNRKAFKGVELYQKVLGVIGAGRIGLGVAKRLKSFGMTVLAYDPFLTKEKAEQLGIELATIDEIAQRSDFVTVHTPLTPKTKGIIDAHFFNQAKPTLQIINVARGGIINENDLLNALNQHQIARAALDVFENEPPLDSPLLDHKNIIVTPHLGASTIEAQEKVAVSVAEEIIDILENGNVTNAVNAPKLNLNHIDEKTQQWLRISQLSGELAIQLLDDAPREIKVTFNGEHAKKEADLITRSIVTSILKQNLGERVNLINAIALLNEQGITHHIENRASQGTFSNYIQINLISEHEEVKIGATVIDGFGARIVRINDYSVDFKPNAYQFISYHKDLPGMVGLTGQLLGKHDINIASMSLGRSSEGGQAMMILSVDQPITQQVIKELYEIGDFDKIYGTTLSI . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 13579 15174 . - 0 GCA_005502385.1_00541 GCA_005502385.1_00541_gene,GCA_005502385.1_00541_mRNA GCA_005502385.1_00541 D-3-phosphoglycerate dehydrogenase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTHNILVSDPISEKGLQSLIHHPDFNVDFKSGLTEKELVDIIPNYQGLIVRSQTQVTESIINHASNLKVIARAGVGVDNIDIKSATLNGILVVNAPDGNTISATEHSVAMILAMARNIPQAYTSLKNKEWNRKAFKGVELYQKVLGVIGAGRIGLGVAKRLKSFGMTVLAYDPFLTKEKAEQLGIELATIDEIAQRSDFVTVHTPLTPKTKGIIDAHFFNQAKPTLQIINVARGGIINENDLLNALNQHQIARAALDVFENEPPLDSPLLDHKNIIVTPHLGASTIEAQEKVAVSVAEEIIDILENGNVTNAVNAPKLNLNHIDEKTQQWLRISQLSGELAIQLLDDAPREIKVTFNGEHAKKEADLITRSIVTSILKQNLGERVNLINAIALLNEQGITHHIENRASQGTFSNYIQINLISEHEEVKIGATVIDGFGARIVRINDYSVDFKPNAYQFISYHKDLPGMVGLTGQLLGKHDINIASMSLGRSSEGGQAMMILSVDQPITQQVIKELYEIGDFDKIYGTTLSI persistent 531 serA phosphoglycerate dehydrogenase 1.1.1.95 GO:0004617,GO:0006564 WP_017176105.1 UPI0002E47D80 UniRef100_A0A3S7GXS3,UniRef50_B9DN70,UniRef90_A0A3S7GXS3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 15164 16327 . - . GCA_005502385.1_00542_gene GCA_005502385.1_00542 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYYYEPLLLTPGPTPVPDEITHALNLSMVGHRSSDFEAIAEEAFNHLKPIFGTKNKVMILTSSGTSVLEASMLNIVNPEDHFVVIVSGAFGNRFKQIAETYYKNVHVYDVEWGKAVDIEAFETYLHSLKHDITAVFTQFCETSTAVLHPIHKLGKVIKAFNQDIYFVVDGVSCIGAVDVDLERDNIDVLVSGSQKALMLPPGLSFVAYNHRAQERFKAVKTPRFYLNLNKYFDSIEQNSTPFTPNVGLFRAVNAYAALIKKEGFNNTIHRHYLIRDGLRESLKALDLNLLVTKDSYASPTVTSFIPHDKDELTYIKSTLKSRFNITIAGGQGKLKGTILRIGHMGKVSPFDILSVVSALEIILTDYRKVNYIGKATLKFTEVIQHDA . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 15164 16327 . - . GCA_005502385.1_00542_mRNA GCA_005502385.1_00542 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYYYEPLLLTPGPTPVPDEITHALNLSMVGHRSSDFEAIAEEAFNHLKPIFGTKNKVMILTSSGTSVLEASMLNIVNPEDHFVVIVSGAFGNRFKQIAETYYKNVHVYDVEWGKAVDIEAFETYLHSLKHDITAVFTQFCETSTAVLHPIHKLGKVIKAFNQDIYFVVDGVSCIGAVDVDLERDNIDVLVSGSQKALMLPPGLSFVAYNHRAQERFKAVKTPRFYLNLNKYFDSIEQNSTPFTPNVGLFRAVNAYAALIKKEGFNNTIHRHYLIRDGLRESLKALDLNLLVTKDSYASPTVTSFIPHDKDELTYIKSTLKSRFNITIAGGQGKLKGTILRIGHMGKVSPFDILSVVSALEIILTDYRKVNYIGKATLKFTEVIQHDA . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 15164 16327 . - 0 GCA_005502385.1_00542 GCA_005502385.1_00542_gene,GCA_005502385.1_00542_mRNA GCA_005502385.1_00542 Soluble hydrogenase 42 kDa subunit GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYYYEPLLLTPGPTPVPDEITHALNLSMVGHRSSDFEAIAEEAFNHLKPIFGTKNKVMILTSSGTSVLEASMLNIVNPEDHFVVIVSGAFGNRFKQIAETYYKNVHVYDVEWGKAVDIEAFETYLHSLKHDITAVFTQFCETSTAVLHPIHKLGKVIKAFNQDIYFVVDGVSCIGAVDVDLERDNIDVLVSGSQKALMLPPGLSFVAYNHRAQERFKAVKTPRFYLNLNKYFDSIEQNSTPFTPNVGLFRAVNAYAALIKKEGFNNTIHRHYLIRDGLRESLKALDLNLLVTKDSYASPTVTSFIPHDKDELTYIKSTLKSRFNITIAGGQGKLKGTILRIGHMGKVSPFDILSVVSALEIILTDYRKVNYIGKATLKFTEVIQHDA persistent 387 Alanine--glyoxylate aminotransferase family protein WP_017176106.1 UPI00031ED0B7 UniRef100_A0A1L8Y8W9,UniRef50_Q2FXK2,UniRef90_A0A1L8Y8W9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 16431 16874 . - . GCA_005502385.1_00543_gene GCA_005502385.1_00543 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVKHDFVVHTSWRGGREEIGKVNGDVISEQISIPSSLGGNGTGTNPDEMLVAAASSCYIISLAATLERAKFTNIHLEIKSIGSAVFENGKFKMEKITHYPTISLTEEEKTHLNKRLPKLLDIADHHCMISNSIRNNVKIEIQATIQD . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 16431 16874 . - . GCA_005502385.1_00543_mRNA GCA_005502385.1_00543 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVKHDFVVHTSWRGGREEIGKVNGDVISEQISIPSSLGGNGTGTNPDEMLVAAASSCYIISLAATLERAKFTNIHLEIKSIGSAVFENGKFKMEKITHYPTISLTEEEKTHLNKRLPKLLDIADHHCMISNSIRNNVKIEIQATIQD . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 16431 16874 . - 0 GCA_005502385.1_00543 GCA_005502385.1_00543_gene,GCA_005502385.1_00543_mRNA GCA_005502385.1_00543 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVKHDFVVHTSWRGGREEIGKVNGDVISEQISIPSSLGGNGTGTNPDEMLVAAASSCYIISLAATLERAKFTNIHLEIKSIGSAVFENGKFKMEKITHYPTISLTEEEKTHLNKRLPKLLDIADHHCMISNSIRNNVKIEIQATIQD persistent 147 osmC OsmC family protein WP_017176107.1 UPI00031223CE UniRef100_A0A1L8Y8Y5,UniRef50_B9DN81,UniRef90_A0A1L8Y8Y5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 16953 17699 . + . GCA_005502385.1_00544_gene GCA_005502385.1_00544 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIQKPNTSFQIVAHRGLSQKYPENTVEGFKAALMQHIDMLEIDVHFTKDKQLVVIHDDSIDRTSNQKGKVKDFTLEELKQFDFGIRHGETFKNTRISTFSEVLSLFKNYSKTLLIEIKKPEQYPGIEKALLEELDKFQIPSHRVIIQSFDVESVKRMSEYTKKYALGVLISKKQYWYKQPDFENIASFAQFINPNYKLINKKFIKRAHEHHLKVIPYTVNNMKDVKKLIHLGVDGIISDIPDNIFKL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 16953 17699 . + . GCA_005502385.1_00544_mRNA GCA_005502385.1_00544 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIQKPNTSFQIVAHRGLSQKYPENTVEGFKAALMQHIDMLEIDVHFTKDKQLVVIHDDSIDRTSNQKGKVKDFTLEELKQFDFGIRHGETFKNTRISTFSEVLSLFKNYSKTLLIEIKKPEQYPGIEKALLEELDKFQIPSHRVIIQSFDVESVKRMSEYTKKYALGVLISKKQYWYKQPDFENIASFAQFINPNYKLINKKFIKRAHEHHLKVIPYTVNNMKDVKKLIHLGVDGIISDIPDNIFKL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 16953 17699 . + 0 GCA_005502385.1_00544 GCA_005502385.1_00544_gene,GCA_005502385.1_00544_mRNA GCA_005502385.1_00544 Glycerophosphodiester phosphodiesterase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIQKPNTSFQIVAHRGLSQKYPENTVEGFKAALMQHIDMLEIDVHFTKDKQLVVIHDDSIDRTSNQKGKVKDFTLEELKQFDFGIRHGETFKNTRISTFSEVLSLFKNYSKTLLIEIKKPEQYPGIEKALLEELDKFQIPSHRVIIQSFDVESVKRMSEYTKKYALGVLISKKQYWYKQPDFENIASFAQFINPNYKLINKKFIKRAHEHHLKVIPYTVNNMKDVKKLIHLGVDGIISDIPDNIFKL persistent 248 Glycerophosphodiester phosphodiesterase 3.1.4.46 WP_048680930.1 UPI00065FFF6D UniRef100_UPI00065FFF6D,UniRef50_A0A380FZJ1,UniRef90_A0A1L8Y945 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 17751 18353 . - . GCA_005502385.1_00545_gene GCA_005502385.1_00545 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MARFRGSNWKKSRRLGISLSGTGKELEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKQHGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVGHGHIEVDGKRVDIPSYTLKPGQVISVREKSQNLDIIKESVEINNFVPEYLDFDADSLKGTFVRLPERSELPAEINEQLIVEYYSR . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 17751 18353 . - . GCA_005502385.1_00545_mRNA GCA_005502385.1_00545 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MARFRGSNWKKSRRLGISLSGTGKELEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKQHGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVGHGHIEVDGKRVDIPSYTLKPGQVISVREKSQNLDIIKESVEINNFVPEYLDFDADSLKGTFVRLPERSELPAEINEQLIVEYYSR . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 17751 18353 . - 0 GCA_005502385.1_00545 GCA_005502385.1_00545_gene,GCA_005502385.1_00545_mRNA GCA_005502385.1_00545 30S ribosomal protein S4 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MARFRGSNWKKSRRLGISLSGTGKELEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKQHGVHGENFMILLASRLDAVVYSLGLARTRRQARQLVGHGHIEVDGKRVDIPSYTLKPGQVISVREKSQNLDIIKESVEINNFVPEYLDFDADSLKGTFVRLPERSELPAEINEQLIVEYYSR persistent 200 rpsD 30S ribosomal protein S4 GO:0003735,GO:0006412,GO:0015935,GO:0019843,GO:0042274 COG0522,J WP_017176109.1 UPI000310738F UniRef100_A0A1L8Y8X8,UniRef50_P21466,UniRef90_Q49YF2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 18585 19052 . - . GCA_005502385.1_00546_gene GCA_005502385.1_00546 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTTTKETNYNLLGKQLASLIEDETNLIAILSNTSALLNDNLDQINWVGFYLIENNELILGPFQGHPACVHISIGKGVCGTAVANNQTQLVDDVNTFPGHIACDANSKSEIVVPIHVDNEIIGVLDIDAPITQRFSKGDQQGLEEIVSILEHQLSK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 18585 19052 . - . GCA_005502385.1_00546_mRNA GCA_005502385.1_00546 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTTTKETNYNLLGKQLASLIEDETNLIAILSNTSALLNDNLDQINWVGFYLIENNELILGPFQGHPACVHISIGKGVCGTAVANNQTQLVDDVNTFPGHIACDANSKSEIVVPIHVDNEIIGVLDIDAPITQRFSKGDQQGLEEIVSILEHQLSK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 18585 19052 . - 0 GCA_005502385.1_00546 GCA_005502385.1_00546_gene,GCA_005502385.1_00546_mRNA GCA_005502385.1_00546 Free methionine-R-sulfoxide reductase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTTTKETNYNLLGKQLASLIEDETNLIAILSNTSALLNDNLDQINWVGFYLIENNELILGPFQGHPACVHISIGKGVCGTAVANNQTQLVDDVNTFPGHIACDANSKSEIVVPIHVDNEIIGVLDIDAPITQRFSKGDQQGLEEIVSILEHQLSK persistent 155 GAF domain-containing protein WP_019835459.1 UPI0003701BFF UniRef100_UPI0003701BFF,UniRef50_A0A0A5FWD3,UniRef90_A0A8X8KJI6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 19184 20878 . + . GCA_005502385.1_00547_gene GCA_005502385.1_00547 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVLYIILAIIIIILIAVGIMFYLRSNKRKMVEQAEERKLKVQQLPFEDNLEKLSALNLKGETRTKYDALKQDTLDHTNNYLAPVEEKIHDAELQLDKFQFAGAQTEIDDAHELMDRYEAGYQSQVDEVNEILSLHKDNEAIYEKCKIDYREMKRDVLANRHQFGEAAAPLEKRIEAFEPELDQYDMLKEEGNYVQAHNHINGLNDSINETKGYMDEIPDLIRETQKELPGQFQDLKYGCRDLKVNGYDLDHVKIDGTLQSLKTELNFVEPMISRLELQEANDKLQQINDKLDEMYDLIEHEVKAKNEVEETKEDITNELFKAREMNYTLRTEIDYIRENYFINESDVHSIRQHENEIQNLVVVYDDILKEMSKSAVRYSEVKDNLEYLDEHVKVINEEQEKLQNHLIQLREDEAEAEDNLLKIQSKKEEIYRRLLASNLTSVPERFVIMKNEIDHEVRAVSEQFNERPLHVKQLKDKVSKIVIQMNTFEDEANDILVNAVYAERLIQYGNRYRKDHHSVDKSLNEAERLFKNNRYKRSIEVSEQALESVEPGITKHIENEVIKG . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 19184 20878 . + . GCA_005502385.1_00547_mRNA GCA_005502385.1_00547 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVLYIILAIIIIILIAVGIMFYLRSNKRKMVEQAEERKLKVQQLPFEDNLEKLSALNLKGETRTKYDALKQDTLDHTNNYLAPVEEKIHDAELQLDKFQFAGAQTEIDDAHELMDRYEAGYQSQVDEVNEILSLHKDNEAIYEKCKIDYREMKRDVLANRHQFGEAAAPLEKRIEAFEPELDQYDMLKEEGNYVQAHNHINGLNDSINETKGYMDEIPDLIRETQKELPGQFQDLKYGCRDLKVNGYDLDHVKIDGTLQSLKTELNFVEPMISRLELQEANDKLQQINDKLDEMYDLIEHEVKAKNEVEETKEDITNELFKAREMNYTLRTEIDYIRENYFINESDVHSIRQHENEIQNLVVVYDDILKEMSKSAVRYSEVKDNLEYLDEHVKVINEEQEKLQNHLIQLREDEAEAEDNLLKIQSKKEEIYRRLLASNLTSVPERFVIMKNEIDHEVRAVSEQFNERPLHVKQLKDKVSKIVIQMNTFEDEANDILVNAVYAERLIQYGNRYRKDHHSVDKSLNEAERLFKNNRYKRSIEVSEQALESVEPGITKHIENEVIKG . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 19184 20878 . + 0 GCA_005502385.1_00547 GCA_005502385.1_00547_gene,GCA_005502385.1_00547_mRNA GCA_005502385.1_00547 Septation ring formation regulator EzrA GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVLYIILAIIIIILIAVGIMFYLRSNKRKMVEQAEERKLKVQQLPFEDNLEKLSALNLKGETRTKYDALKQDTLDHTNNYLAPVEEKIHDAELQLDKFQFAGAQTEIDDAHELMDRYEAGYQSQVDEVNEILSLHKDNEAIYEKCKIDYREMKRDVLANRHQFGEAAAPLEKRIEAFEPELDQYDMLKEEGNYVQAHNHINGLNDSINETKGYMDEIPDLIRETQKELPGQFQDLKYGCRDLKVNGYDLDHVKIDGTLQSLKTELNFVEPMISRLELQEANDKLQQINDKLDEMYDLIEHEVKAKNEVEETKEDITNELFKAREMNYTLRTEIDYIRENYFINESDVHSIRQHENEIQNLVVVYDDILKEMSKSAVRYSEVKDNLEYLDEHVKVINEEQEKLQNHLIQLREDEAEAEDNLLKIQSKKEEIYRRLLASNLTSVPERFVIMKNEIDHEVRAVSEQFNERPLHVKQLKDKVSKIVIQMNTFEDEANDILVNAVYAERLIQYGNRYRKDHHSVDKSLNEAERLFKNNRYKRSIEVSEQALESVEPGITKHIENEVIKG persistent 564 ezrA septation ring formation regulator EzrA WP_048761515.1 UPI0006606FB4 UniRef100_UPI002878773E,UniRef50_Q5HNI8,UniRef90_A0A8X8GQH9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 21041 22177 . + . GCA_005502385.1_00548_gene GCA_005502385.1_00548 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIYLDNAATTKPNQAVLDSFLKVSEKAYYNANSPHQMGLQSEKILLQAKSRVKEMLNLNNNTDVIFTSGATESNNIALKGIALRKKQFANVIITSVLEHPSVLEVMRYLETQGFILKYVNVTPNGQIDINHLEQLMTDNVGLVTCMYVNNVMGQIQPIKEIGSLLKQYPKAHFHVDGVQALGKIPMQLENVNSVSFSGHKFNGLKGQGILIIDNKEKIEPTVFGGGQEYGIRSGTVNLAMNVSLVKAMEIAIQNLNELNHRLSRYNKVIRESLSQYKGVYINSPENSAPHILNIAFPGVKGEVLVNAFSKLDIMVSTTSACSSKREKLNEVLLAMDIEDNRIEGSVRLSMGETTTEKDIEQFKDKFKLIYAQIKELLK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 21041 22177 . + . GCA_005502385.1_00548_mRNA GCA_005502385.1_00548 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIYLDNAATTKPNQAVLDSFLKVSEKAYYNANSPHQMGLQSEKILLQAKSRVKEMLNLNNNTDVIFTSGATESNNIALKGIALRKKQFANVIITSVLEHPSVLEVMRYLETQGFILKYVNVTPNGQIDINHLEQLMTDNVGLVTCMYVNNVMGQIQPIKEIGSLLKQYPKAHFHVDGVQALGKIPMQLENVNSVSFSGHKFNGLKGQGILIIDNKEKIEPTVFGGGQEYGIRSGTVNLAMNVSLVKAMEIAIQNLNELNHRLSRYNKVIRESLSQYKGVYINSPENSAPHILNIAFPGVKGEVLVNAFSKLDIMVSTTSACSSKREKLNEVLLAMDIEDNRIEGSVRLSMGETTTEKDIEQFKDKFKLIYAQIKELLK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 21041 22177 . + 0 GCA_005502385.1_00548 GCA_005502385.1_00548_gene,GCA_005502385.1_00548_mRNA GCA_005502385.1_00548 Cysteine desulfurase NifS GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIYLDNAATTKPNQAVLDSFLKVSEKAYYNANSPHQMGLQSEKILLQAKSRVKEMLNLNNNTDVIFTSGATESNNIALKGIALRKKQFANVIITSVLEHPSVLEVMRYLETQGFILKYVNVTPNGQIDINHLEQLMTDNVGLVTCMYVNNVMGQIQPIKEIGSLLKQYPKAHFHVDGVQALGKIPMQLENVNSVSFSGHKFNGLKGQGILIIDNKEKIEPTVFGGGQEYGIRSGTVNLAMNVSLVKAMEIAIQNLNELNHRLSRYNKVIRESLSQYKGVYINSPENSAPHILNIAFPGVKGEVLVNAFSKLDIMVSTTSACSSKREKLNEVLLAMDIEDNRIEGSVRLSMGETTTEKDIEQFKDKFKLIYAQIKELLK persistent 378 Cysteine desulfurase 2.8.1.7 WP_019835457.1 UPI00036D7997 UniRef100_UPI00036D7997,UniRef50_A0A0D6HH30,UniRef90_A0A8X8GGJ8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 22178 23401 . + . GCA_005502385.1_00549_gene GCA_005502385.1_00549 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKYDHILVRYGELTLKGTNRKRFTNVLKENVIQSLRSLEGTRVKCERDRMFISLFEEANVNEVMNRLTKIFGIKSISPVFKTTQNLEDIKQLCVSLAKDFAHGDTFKIDVKRVDKSFSLDTYQLQRELGGVILKSVDHLKVDVKRPTHNIKVEVRKEGVYIYTKVIDGAGGLPTGTGGKTLLQLSGGIDSPVAGMEMMKRGVKIEAIHFHSPPFTSEKAKDKVIELTRILSERVGPIKLHIVPFTALQKQINKSVHPRYTMTTTRRMMLRVTDIILERIGANAIVNGENLGQVASQTLKSMYAINDVTSTPILRPLISLDKEDIIKKAKEIGTFEVSIQPYEDCCTIFTPKNPVTEPDFDKVVKYESVFNFDDLVQEAADNVETIEINKDYKTEKDKSTDALIDELF . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 22178 23401 . + . GCA_005502385.1_00549_mRNA GCA_005502385.1_00549 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKYDHILVRYGELTLKGTNRKRFTNVLKENVIQSLRSLEGTRVKCERDRMFISLFEEANVNEVMNRLTKIFGIKSISPVFKTTQNLEDIKQLCVSLAKDFAHGDTFKIDVKRVDKSFSLDTYQLQRELGGVILKSVDHLKVDVKRPTHNIKVEVRKEGVYIYTKVIDGAGGLPTGTGGKTLLQLSGGIDSPVAGMEMMKRGVKIEAIHFHSPPFTSEKAKDKVIELTRILSERVGPIKLHIVPFTALQKQINKSVHPRYTMTTTRRMMLRVTDIILERIGANAIVNGENLGQVASQTLKSMYAINDVTSTPILRPLISLDKEDIIKKAKEIGTFEVSIQPYEDCCTIFTPKNPVTEPDFDKVVKYESVFNFDDLVQEAADNVETIEINKDYKTEKDKSTDALIDELF . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 22178 23401 . + 0 GCA_005502385.1_00549 GCA_005502385.1_00549_gene,GCA_005502385.1_00549_mRNA GCA_005502385.1_00549 putative tRNA sulfurtransferase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKYDHILVRYGELTLKGTNRKRFTNVLKENVIQSLRSLEGTRVKCERDRMFISLFEEANVNEVMNRLTKIFGIKSISPVFKTTQNLEDIKQLCVSLAKDFAHGDTFKIDVKRVDKSFSLDTYQLQRELGGVILKSVDHLKVDVKRPTHNIKVEVRKEGVYIYTKVIDGAGGLPTGTGGKTLLQLSGGIDSPVAGMEMMKRGVKIEAIHFHSPPFTSEKAKDKVIELTRILSERVGPIKLHIVPFTALQKQINKSVHPRYTMTTTRRMMLRVTDIILERIGANAIVNGENLGQVASQTLKSMYAINDVTSTPILRPLISLDKEDIIKKAKEIGTFEVSIQPYEDCCTIFTPKNPVTEPDFDKVVKYESVFNFDDLVQEAADNVETIEINKDYKTEKDKSTDALIDELF persistent 407 putative tRNA sulfurtransferase 2.8.1.4 WP_019835456.1 UPI0003659DC1 UniRef100_UPI0003659DC1,UniRef50_Q4L756,UniRef90_A0A3S7H0E5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 23432 24217 . + . GCA_005502385.1_00550_gene GCA_005502385.1_00550 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGVIELSFHIIFIIISFGFLAAFIDAVVGGGGLISIPALLAIGMPPSLALGTNKLASAFGSLTSAIKFLKSGNVDKKIVFRLFPFVFIFAVGGASLATFLPSEVLKPLVIVILTLVLIYTIFKKEWGNVRTFSKFTISKAIAFISLLLLIGFYDGFLGGGTGSFMLFVLLMFGFDFLSAAGNAKVLNFASNVGALTLFIILGQVNIAYGLIMAVSMVIGSYTGAHFAIKKGVGYVKILFIIVTILLILKNTFDYIMQIISN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 23432 24217 . + . GCA_005502385.1_00550_mRNA GCA_005502385.1_00550 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGVIELSFHIIFIIISFGFLAAFIDAVVGGGGLISIPALLAIGMPPSLALGTNKLASAFGSLTSAIKFLKSGNVDKKIVFRLFPFVFIFAVGGASLATFLPSEVLKPLVIVILTLVLIYTIFKKEWGNVRTFSKFTISKAIAFISLLLLIGFYDGFLGGGTGSFMLFVLLMFGFDFLSAAGNAKVLNFASNVGALTLFIILGQVNIAYGLIMAVSMVIGSYTGAHFAIKKGVGYVKILFIIVTILLILKNTFDYIMQIISN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 23432 24217 . + 0 GCA_005502385.1_00550 GCA_005502385.1_00550_gene,GCA_005502385.1_00550_mRNA GCA_005502385.1_00550 putative membrane transporter protein YfcA GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGVIELSFHIIFIIISFGFLAAFIDAVVGGGGLISIPALLAIGMPPSLALGTNKLASAFGSLTSAIKFLKSGNVDKKIVFRLFPFVFIFAVGGASLATFLPSEVLKPLVIVILTLVLIYTIFKKEWGNVRTFSKFTISKAIAFISLLLLIGFYDGFLGGGTGSFMLFVLLMFGFDFLSAAGNAKVLNFASNVGALTLFIILGQVNIAYGLIMAVSMVIGSYTGAHFAIKKGVGYVKILFIIVTILLILKNTFDYIMQIISN persistent 261 putative membrane transporter protein WP_019835455.1 UPI0003667E98 UniRef100_UPI0003667E98,UniRef50_A0A239TZL2,UniRef90_A0A6N0I4D5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 24311 24805 . + . GCA_005502385.1_00551_gene GCA_005502385.1_00551 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEITFKNNPIHLEGTEVSKGDVAPNFKVLDNSLNEVTLDNFKGQKKLISVVPSIDTGVCDQQTRKFNEEASQENGVVLTISADLPFAQKRWCASNGLENVITLSDHKDLSFGEHYGVVMKEMRLLARSVFVLDENNHVVYKELVQEGTDFPNFEAALEAYRNI . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 24311 24805 . + . GCA_005502385.1_00551_mRNA GCA_005502385.1_00551 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEITFKNNPIHLEGTEVSKGDVAPNFKVLDNSLNEVTLDNFKGQKKLISVVPSIDTGVCDQQTRKFNEEASQENGVVLTISADLPFAQKRWCASNGLENVITLSDHKDLSFGEHYGVVMKEMRLLARSVFVLDENNHVVYKELVQEGTDFPNFEAALEAYRNI . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 24311 24805 . + 0 GCA_005502385.1_00551 GCA_005502385.1_00551_gene,GCA_005502385.1_00551_mRNA GCA_005502385.1_00551 Thiol peroxidase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEITFKNNPIHLEGTEVSKGDVAPNFKVLDNSLNEVTLDNFKGQKKLISVVPSIDTGVCDQQTRKFNEEASQENGVVLTISADLPFAQKRWCASNGLENVITLSDHKDLSFGEHYGVVMKEMRLLARSVFVLDENNHVVYKELVQEGTDFPNFEAALEAYRNI persistent 164 tpx thiol peroxidase 1.11.1.-,1.11.1.24 GO:0008379,GO:0016684 WP_002448307.1 UPI00019FCA58 UniRef100_A0A1L8Y8Y3,UniRef50_Q49YE4,UniRef90_A0A1L8Y8Y3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 24929 25876 . + . GCA_005502385.1_00552_gene GCA_005502385.1_00552 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAEEQTIMERLFRTLDDKAKSLNEENGQSFIENLGLAMEDVYRNQRTLLEQATLQDRRKAFQFAYLSLLQEENIQANHQITPDSIGLILGFLVQKFIENNKELQIVDIASGAGHLSATVNEVLKDSEVMHHLIEVDPVLSRVSVHLANFLEIPFDVYPQDAIMPLPLEEADVVVGDFPIGYYPLDERSKEMKLGFEEGHSYSHFLLIEQAVYALKQSGYAFLVVPSNIFEDEHVKQLQNFITTETEMQAFLNLPKTLFKNENARKSILILQKKKANETKPVEVLLANIPDFKNPNQFHGFINELNEWMDANHSQK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 24929 25876 . + . GCA_005502385.1_00552_mRNA GCA_005502385.1_00552 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAEEQTIMERLFRTLDDKAKSLNEENGQSFIENLGLAMEDVYRNQRTLLEQATLQDRRKAFQFAYLSLLQEENIQANHQITPDSIGLILGFLVQKFIENNKELQIVDIASGAGHLSATVNEVLKDSEVMHHLIEVDPVLSRVSVHLANFLEIPFDVYPQDAIMPLPLEEADVVVGDFPIGYYPLDERSKEMKLGFEEGHSYSHFLLIEQAVYALKQSGYAFLVVPSNIFEDEHVKQLQNFITTETEMQAFLNLPKTLFKNENARKSILILQKKKANETKPVEVLLANIPDFKNPNQFHGFINELNEWMDANHSQK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 24929 25876 . + 0 GCA_005502385.1_00552 GCA_005502385.1_00552_gene,GCA_005502385.1_00552_mRNA GCA_005502385.1_00552 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAEEQTIMERLFRTLDDKAKSLNEENGQSFIENLGLAMEDVYRNQRTLLEQATLQDRRKAFQFAYLSLLQEENIQANHQITPDSIGLILGFLVQKFIENNKELQIVDIASGAGHLSATVNEVLKDSEVMHHLIEVDPVLSRVSVHLANFLEIPFDVYPQDAIMPLPLEEADVVVGDFPIGYYPLDERSKEMKLGFEEGHSYSHFLLIEQAVYALKQSGYAFLVVPSNIFEDEHVKQLQNFITTETEMQAFLNLPKTLFKNENARKSILILQKKKANETKPVEVLLANIPDFKNPNQFHGFINELNEWMDANHSQK persistent 315 Class I SAM-dependent methyltransferase WP_019835454.1 UPI0003757347 UniRef100_UPI0003757347,UniRef50_B9DN82,UniRef90_A0A8X8GL95 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 25959 27155 . + . GCA_005502385.1_00553_gene GCA_005502385.1_00553 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKLVLAINAGSSSLKFQLIRMPEEELVTKGLIERIGIKDSIFTIEVNGEKVKRVKDIKDHEEAINIMLDSFKKHGIINDINDIAGTGHRVVHGGELFPKSALVTDEVEEKIESLSELAPLHNPANLMGVRAFRKLLPNIPHVVVFDTSFHQTMPESSYLYSLPYNYYEDFGIRKYGFHGTSHKYVSRRAADILEKPIEELRIISCHIGNGASIAAIDGGKSIDTSMGFTPLAGVTMGTRSGDIDPALIPFIMEKTGKTADEVLTVLNKESGLLGISGTSSDLRDLLGEAANGDERAELALDIFASRIHKYIGSYAARMHGVDVIVFTAGVGENSSPIRAKILEGLEFMGVYWDPKKNESTHGEEAFINYPHSPVKVIVVPTNEEVMIARDTVKFGEL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 25959 27155 . + . GCA_005502385.1_00553_mRNA GCA_005502385.1_00553 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKLVLAINAGSSSLKFQLIRMPEEELVTKGLIERIGIKDSIFTIEVNGEKVKRVKDIKDHEEAINIMLDSFKKHGIINDINDIAGTGHRVVHGGELFPKSALVTDEVEEKIESLSELAPLHNPANLMGVRAFRKLLPNIPHVVVFDTSFHQTMPESSYLYSLPYNYYEDFGIRKYGFHGTSHKYVSRRAADILEKPIEELRIISCHIGNGASIAAIDGGKSIDTSMGFTPLAGVTMGTRSGDIDPALIPFIMEKTGKTADEVLTVLNKESGLLGISGTSSDLRDLLGEAANGDERAELALDIFASRIHKYIGSYAARMHGVDVIVFTAGVGENSSPIRAKILEGLEFMGVYWDPKKNESTHGEEAFINYPHSPVKVIVVPTNEEVMIARDTVKFGEL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 25959 27155 . + 0 GCA_005502385.1_00553 GCA_005502385.1_00553_gene,GCA_005502385.1_00553_mRNA GCA_005502385.1_00553 Acetate kinase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKLVLAINAGSSSLKFQLIRMPEEELVTKGLIERIGIKDSIFTIEVNGEKVKRVKDIKDHEEAINIMLDSFKKHGIINDINDIAGTGHRVVHGGELFPKSALVTDEVEEKIESLSELAPLHNPANLMGVRAFRKLLPNIPHVVVFDTSFHQTMPESSYLYSLPYNYYEDFGIRKYGFHGTSHKYVSRRAADILEKPIEELRIISCHIGNGASIAAIDGGKSIDTSMGFTPLAGVTMGTRSGDIDPALIPFIMEKTGKTADEVLTVLNKESGLLGISGTSSDLRDLLGEAANGDERAELALDIFASRIHKYIGSYAARMHGVDVIVFTAGVGENSSPIRAKILEGLEFMGVYWDPKKNESTHGEEAFINYPHSPVKVIVVPTNEEVMIARDTVKFGEL persistent 398 Acetate kinase 2.7.2.1 WP_019835453.1 UPI000360ED54 UniRef100_UPI0025549223,UniRef50_O52594,UniRef90_A0A533IX36 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 27337 27834 . - . GCA_005502385.1_00554_gene GCA_005502385.1_00554 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLTYKNILIAVDGSHEAEWAFNKAVDVAKRNDAQLTIVNIIDSRTYSSYEVYDAQFTEKSKGFSDELLKGYKEVASRAGVTNVETRLEFGSPKAIIPKKLANELGVDLIMCGTSGLNAVERFIVGSVSEAIVRHAPCDVLVVRTEEIPEDFQPEVATPEFRKQFS . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 27337 27834 . - . GCA_005502385.1_00554_mRNA GCA_005502385.1_00554 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLTYKNILIAVDGSHEAEWAFNKAVDVAKRNDAQLTIVNIIDSRTYSSYEVYDAQFTEKSKGFSDELLKGYKEVASRAGVTNVETRLEFGSPKAIIPKKLANELGVDLIMCGTSGLNAVERFIVGSVSEAIVRHAPCDVLVVRTEEIPEDFQPEVATPEFRKQFS . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 27337 27834 . - 0 GCA_005502385.1_00554 GCA_005502385.1_00554_gene,GCA_005502385.1_00554_mRNA GCA_005502385.1_00554 Putative universal stress protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLTYKNILIAVDGSHEAEWAFNKAVDVAKRNDAQLTIVNIIDSRTYSSYEVYDAQFTEKSKGFSDELLKGYKEVASRAGVTNVETRLEFGSPKAIIPKKLANELGVDLIMCGTSGLNAVERFIVGSVSEAIVRHAPCDVLVVRTEEIPEDFQPEVATPEFRKQFS persistent 165 uspA Putative universal stress protein SH1215 GO:0005737 COG0589,T WP_048761525.1 UPI0006608471 UniRef100_UPI0006608471,UniRef50_Q2FXL6,UniRef90_Q4L751 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 27987 29105 . + . GCA_005502385.1_00555_gene GCA_005502385.1_00555 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIGIPKEIKNNENRVGLSPSGIHALVEQGHTVLVETNAGSGSYFEDEDYKQAGAEIVNDAKTTWDVDMVIKVKEPLEEEYKYFREGLILFTYLHLANEEKLTQALVDNKVVSIAYETVQLPDRSLPLLTPMSEVAGRMSAQIGAEFLQKINGGMGILLGGVPGVPKGKVTIIGGGQAGTNAAKIALGLGADVTILDVNPKRLAELEDLFDGRVNTIMSNPLNIENAVKESDLVIGAVLIPGAKAPSLVTEDMIKQMKDGSVVVDIAIDQGGIFETTDKITTHDDPTYVKHGVVHYAVANMPGAVPRTSTIALNNATLPYAQLLANKGYKEAFKANQPLSLGLNTYKGYVTNKGVAEAFDLTYTSIEDALKE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 27987 29105 . + . GCA_005502385.1_00555_mRNA GCA_005502385.1_00555 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIGIPKEIKNNENRVGLSPSGIHALVEQGHTVLVETNAGSGSYFEDEDYKQAGAEIVNDAKTTWDVDMVIKVKEPLEEEYKYFREGLILFTYLHLANEEKLTQALVDNKVVSIAYETVQLPDRSLPLLTPMSEVAGRMSAQIGAEFLQKINGGMGILLGGVPGVPKGKVTIIGGGQAGTNAAKIALGLGADVTILDVNPKRLAELEDLFDGRVNTIMSNPLNIENAVKESDLVIGAVLIPGAKAPSLVTEDMIKQMKDGSVVVDIAIDQGGIFETTDKITTHDDPTYVKHGVVHYAVANMPGAVPRTSTIALNNATLPYAQLLANKGYKEAFKANQPLSLGLNTYKGYVTNKGVAEAFDLTYTSIEDALKE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 27987 29105 . + 0 GCA_005502385.1_00555 GCA_005502385.1_00555_gene,GCA_005502385.1_00555_mRNA GCA_005502385.1_00555 Alanine dehydrogenase 2 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIGIPKEIKNNENRVGLSPSGIHALVEQGHTVLVETNAGSGSYFEDEDYKQAGAEIVNDAKTTWDVDMVIKVKEPLEEEYKYFREGLILFTYLHLANEEKLTQALVDNKVVSIAYETVQLPDRSLPLLTPMSEVAGRMSAQIGAEFLQKINGGMGILLGGVPGVPKGKVTIIGGGQAGTNAAKIALGLGADVTILDVNPKRLAELEDLFDGRVNTIMSNPLNIENAVKESDLVIGAVLIPGAKAPSLVTEDMIKQMKDGSVVVDIAIDQGGIFETTDKITTHDDPTYVKHGVVHYAVANMPGAVPRTSTIALNNATLPYAQLLANKGYKEAFKANQPLSLGLNTYKGYVTNKGVAEAFDLTYTSIEDALKE persistent 372 ald alanine dehydrogenase 1.4.1.1 GO:0000166,GO:0000286,GO:0005829,GO:0005886,GO:0006524,GO:0042853 COG0686,E WP_049379582.1 UPI00066C2423 UniRef100_UPI00066C2423,UniRef50_P17556,UniRef90_Q4L750 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 29194 30249 . - . GCA_005502385.1_00556_gene GCA_005502385.1_00556 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIKTDEIIATLKDKNADAAWITTPLNIFYFTGYRSEPHERLFALLITSNGECTLYCPKMEVEEVKHSPFNGNIVGYLDTESPFDLAPHTFDKLLIESEHLTVKRQRELTNNFNIKVYEDIDLTIKKLRNIKDENEVKNIKKAAELADKCIDIGVSFLSEGVTEREVVNHIENEIKKYGVSEMSFDTMVLFGDHAASPHGTPGDRTLVKNEYVLFDLGVVYNHYCSDMTRTVKFGEPSKEARTIYDIVLKAEQSAIEAIKPGVPLQNIDKIARDIISEAGYGDFFPHRLGHGLGLEEHEYQDVSSTNTNLLEAGMVITIEPGIYVPDVAGVRIEDDILVTDTGFEVLTHYNK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 29194 30249 . - . GCA_005502385.1_00556_mRNA GCA_005502385.1_00556 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIKTDEIIATLKDKNADAAWITTPLNIFYFTGYRSEPHERLFALLITSNGECTLYCPKMEVEEVKHSPFNGNIVGYLDTESPFDLAPHTFDKLLIESEHLTVKRQRELTNNFNIKVYEDIDLTIKKLRNIKDENEVKNIKKAAELADKCIDIGVSFLSEGVTEREVVNHIENEIKKYGVSEMSFDTMVLFGDHAASPHGTPGDRTLVKNEYVLFDLGVVYNHYCSDMTRTVKFGEPSKEARTIYDIVLKAEQSAIEAIKPGVPLQNIDKIARDIISEAGYGDFFPHRLGHGLGLEEHEYQDVSSTNTNLLEAGMVITIEPGIYVPDVAGVRIEDDILVTDTGFEVLTHYNK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 29194 30249 . - 0 GCA_005502385.1_00556 GCA_005502385.1_00556_gene,GCA_005502385.1_00556_mRNA GCA_005502385.1_00556 putative peptidase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIKTDEIIATLKDKNADAAWITTPLNIFYFTGYRSEPHERLFALLITSNGECTLYCPKMEVEEVKHSPFNGNIVGYLDTESPFDLAPHTFDKLLIESEHLTVKRQRELTNNFNIKVYEDIDLTIKKLRNIKDENEVKNIKKAAELADKCIDIGVSFLSEGVTEREVVNHIENEIKKYGVSEMSFDTMVLFGDHAASPHGTPGDRTLVKNEYVLFDLGVVYNHYCSDMTRTVKFGEPSKEARTIYDIVLKAEQSAIEAIKPGVPLQNIDKIARDIISEAGYGDFFPHRLGHGLGLEEHEYQDVSSTNTNLLEAGMVITIEPGIYVPDVAGVRIEDDILVTDTGFEVLTHYNK persistent 351 Aminopeptidase P family protein WP_048679560.1 UPI0006601C6C UniRef100_UPI0006601C6C,UniRef50_Q7A552,UniRef90_A0A6N0I4H7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 30379 31068 . + . GCA_005502385.1_00557_gene GCA_005502385.1_00557 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKLSFHGQSTIYFESNDKKVIVDPFISGNDKSDLDEQTLDVDYIILTHGHGDHFGDVVELANRNHATVIGSAEVQGYLTTYHGIEHAHGMNIGGKYQFDFGTVKFVQAFHSSSYTNEDGIPVYLGMPMGVIIEAEGKTIYHAGDTGLFSDMKLIAERHPVDVCFIPIGDNFTMGIEDASYAINEFIKPKISVPIHYNTFPLIEQDPQKFKEAVSQGEVQILQPGDEVTF . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 30379 31068 . + . GCA_005502385.1_00557_mRNA GCA_005502385.1_00557 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKLSFHGQSTIYFESNDKKVIVDPFISGNDKSDLDEQTLDVDYIILTHGHGDHFGDVVELANRNHATVIGSAEVQGYLTTYHGIEHAHGMNIGGKYQFDFGTVKFVQAFHSSSYTNEDGIPVYLGMPMGVIIEAEGKTIYHAGDTGLFSDMKLIAERHPVDVCFIPIGDNFTMGIEDASYAINEFIKPKISVPIHYNTFPLIEQDPQKFKEAVSQGEVQILQPGDEVTF . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 30379 31068 . + 0 GCA_005502385.1_00557 GCA_005502385.1_00557_gene,GCA_005502385.1_00557_mRNA GCA_005502385.1_00557 hypothetical protein UPF0173 metal-dependent hydrolase SA1529 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKLSFHGQSTIYFESNDKKVIVDPFISGNDKSDLDEQTLDVDYIILTHGHGDHFGDVVELANRNHATVIGSAEVQGYLTTYHGIEHAHGMNIGGKYQFDFGTVKFVQAFHSSSYTNEDGIPVYLGMPMGVIIEAEGKTIYHAGDTGLFSDMKLIAERHPVDVCFIPIGDNFTMGIEDASYAINEFIKPKISVPIHYNTFPLIEQDPQKFKEAVSQGEVQILQPGDEVTF persistent 229 metal-dependent hydrolase WP_048679563.1 UPI0006600208 UniRef100_UPI0006600208,UniRef50_Q2FXM0,UniRef90_A0A657M5S4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 31127 31540 . - . GCA_005502385.1_00558_gene GCA_005502385.1_00558 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYKNILLGVDTQLKNDKALKEISKLAGPGTVVTIMNAIGEQDIQASIKGGTHIEKLTHRRDQGLEHTRHTLDDYGINYDQIIVRGNPKDELVKHANSGKYDIVVLSNRKAEQQKKFVLGSVSHKVAKRATIPVLIVK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 31127 31540 . - . GCA_005502385.1_00558_mRNA GCA_005502385.1_00558 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYKNILLGVDTQLKNDKALKEISKLAGPGTVVTIMNAIGEQDIQASIKGGTHIEKLTHRRDQGLEHTRHTLDDYGINYDQIIVRGNPKDELVKHANSGKYDIVVLSNRKAEQQKKFVLGSVSHKVAKRATIPVLIVK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 31127 31540 . - 0 GCA_005502385.1_00558 GCA_005502385.1_00558_gene,GCA_005502385.1_00558_mRNA GCA_005502385.1_00558 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYKNILLGVDTQLKNDKALKEISKLAGPGTVVTIMNAIGEQDIQASIKGGTHIEKLTHRRDQGLEHTRHTLDDYGINYDQIIVRGNPKDELVKHANSGKYDIVVLSNRKAEQQKKFVLGSVSHKVAKRATIPVLIVK persistent 137 Universal stress protein WP_048679566.1 UPI0006602222 UniRef100_UPI0006602222,UniRef50_Q2FXM1,UniRef90_A0A533ITL7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 31757 33055 . + . GCA_005502385.1_00559_gene GCA_005502385.1_00559 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTKHEQIVSYIESLNIGQKISVRKIAKVMNVSEGTAYRAIKDASQLGFVTTIDRVGTVRIDKKSREQIEHLTFQEIVNIIEGDIISGKNGLNKTVSKFAIGAMELKDVVKYIGNQTLLIVGNRPEVQMEALKRGSGILITGGFSTAQNIIDYANKQELPIISSNYDTFLVANIINRAMYNQMIRKEILIVEDIVKPINDMTVVFDEMGLEDYISRAKVTGHSRFPVVNKDWKLVGIVTSKEIIHMNEDDKINKVMTRRPINVELTTTVASCAHIMIWDGIEILPVTTRNKKAIGVITRNDVLKAMQLIGRQPQIGETIIDQIAKHISINHNETSVKISPVLTNQYGTLSKAICVAIIEETIKHELRKYKKVDVMIESLNIIYIKNVAIESTLDVKYNMLDVGRNFAKLEVTMTCKNEKVANAMIICQMFEGV . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 31757 33055 . + . GCA_005502385.1_00559_mRNA GCA_005502385.1_00559 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTKHEQIVSYIESLNIGQKISVRKIAKVMNVSEGTAYRAIKDASQLGFVTTIDRVGTVRIDKKSREQIEHLTFQEIVNIIEGDIISGKNGLNKTVSKFAIGAMELKDVVKYIGNQTLLIVGNRPEVQMEALKRGSGILITGGFSTAQNIIDYANKQELPIISSNYDTFLVANIINRAMYNQMIRKEILIVEDIVKPINDMTVVFDEMGLEDYISRAKVTGHSRFPVVNKDWKLVGIVTSKEIIHMNEDDKINKVMTRRPINVELTTTVASCAHIMIWDGIEILPVTTRNKKAIGVITRNDVLKAMQLIGRQPQIGETIIDQIAKHISINHNETSVKISPVLTNQYGTLSKAICVAIIEETIKHELRKYKKVDVMIESLNIIYIKNVAIESTLDVKYNMLDVGRNFAKLEVTMTCKNEKVANAMIICQMFEGV . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 31757 33055 . + 0 GCA_005502385.1_00559 GCA_005502385.1_00559_gene,GCA_005502385.1_00559_mRNA GCA_005502385.1_00559 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTKHEQIVSYIESLNIGQKISVRKIAKVMNVSEGTAYRAIKDASQLGFVTTIDRVGTVRIDKKSREQIEHLTFQEIVNIIEGDIISGKNGLNKTVSKFAIGAMELKDVVKYIGNQTLLIVGNRPEVQMEALKRGSGILITGGFSTAQNIIDYANKQELPIISSNYDTFLVANIINRAMYNQMIRKEILIVEDIVKPINDMTVVFDEMGLEDYISRAKVTGHSRFPVVNKDWKLVGIVTSKEIIHMNEDDKINKVMTRRPINVELTTTVASCAHIMIWDGIEILPVTTRNKKAIGVITRNDVLKAMQLIGRQPQIGETIIDQIAKHISINHNETSVKISPVLTNQYGTLSKAICVAIIEETIKHELRKYKKVDVMIESLNIIYIKNVAIESTLDVKYNMLDVGRNFAKLEVTMTCKNEKVANAMIICQMFEGV persistent 432 CBS domain-containing protein WP_048761531.1 UPI0006606C1A UniRef100_UPI0006606C1A,UniRef50_A0A7U7JV62,UniRef90_A0A974KYW2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 33086 34024 . + . GCA_005502385.1_00560_gene GCA_005502385.1_00560 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVEIFNKIMNEIDKYETVIIHRHVRPDPDAYGSQLGLKYYLQRKFPEKSIYAVGQPESSLAFIGDLDRVRDDMYQNALVIVCDTANAPRIDDQRFNQGKDLIKIDHHPATDQYGRINYVDTNASSTSEIIFDFITHFNDINIIDESVARVLYLGIVGDTGRFLFSNTTPHTMKVASRLLEFPFNHNEILNQLGEKDPKLMPFQGYILQNFQLSEDHQYCQIKITKDVLNQFQIAPNEASQFVNTVADIKGLKIWMFGVDEGDQIRCRLRSKGITINDIANQFGGGGHPNASGVSVENWEQFETLGEALRQKL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 33086 34024 . + . GCA_005502385.1_00560_mRNA GCA_005502385.1_00560 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVEIFNKIMNEIDKYETVIIHRHVRPDPDAYGSQLGLKYYLQRKFPEKSIYAVGQPESSLAFIGDLDRVRDDMYQNALVIVCDTANAPRIDDQRFNQGKDLIKIDHHPATDQYGRINYVDTNASSTSEIIFDFITHFNDINIIDESVARVLYLGIVGDTGRFLFSNTTPHTMKVASRLLEFPFNHNEILNQLGEKDPKLMPFQGYILQNFQLSEDHQYCQIKITKDVLNQFQIAPNEASQFVNTVADIKGLKIWMFGVDEGDQIRCRLRSKGITINDIANQFGGGGHPNASGVSVENWEQFETLGEALRQKL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 33086 34024 . + 0 GCA_005502385.1_00560 GCA_005502385.1_00560_gene,GCA_005502385.1_00560_mRNA GCA_005502385.1_00560 Bifunctional oligoribonuclease and PAP phosphatase NrnA GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVEIFNKIMNEIDKYETVIIHRHVRPDPDAYGSQLGLKYYLQRKFPEKSIYAVGQPESSLAFIGDLDRVRDDMYQNALVIVCDTANAPRIDDQRFNQGKDLIKIDHHPATDQYGRINYVDTNASSTSEIIFDFITHFNDINIIDESVARVLYLGIVGDTGRFLFSNTTPHTMKVASRLLEFPFNHNEILNQLGEKDPKLMPFQGYILQNFQLSEDHQYCQIKITKDVLNQFQIAPNEASQFVNTVADIKGLKIWMFGVDEGDQIRCRLRSKGITINDIANQFGGGGHPNASGVSVENWEQFETLGEALRQKL persistent 312 Oligoribonuclease 3.1.13.3,3.1.3.7 WP_048761533.1 UPI00065FC9A4 UniRef100_UPI00065FC9A4,UniRef50_A0A7U7JV59,UniRef90_A0A3S7H0F2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 34045 37248 . + . GCA_005502385.1_00561_gene GCA_005502385.1_00561 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFVHLNIHSTYDLLYSSLKINDVVSKAKENRYQALAITDTNVLYGFPKFYDACVKEGIKPIFGMTVMVSDEISTIETVLFAKNNEGLHALYQLSSAINMKQKTTIPLKWLQKYSYHLAIVFKDAHASHQSLIQTLKNNESVFINHTSQLDFSDDKIVFLNNARYLNPEDADTIPALKAIKNNTKLDLVNDIKDAHEYFPTSENIKAFQLSEKIIANTKALADECNAEIQYHQNLLPNFKTPNQQSTKSYLLEKLKYSLKEFKLDKDQRYIDRLHHEYSIITNMGFEDYFLIVSDLIHFAKTHDVMVGPGRGSSAGSLVSYLLGITTIDPIKFDLLFERFLNPERVTMPDIDIDFEDTRREKVIQYVQEKYGQYHVSGIVTFGHLLARAVARDVGRIIGFDEKTLNEISNLIPHQLGITLEEAYQNEKFKAFVHKSYRHEKWFEISKKLEGLPRHTSTHAAGIIINDKPLYDFAPLTMGDTGILTQWTMTEAERLGLLKIDFLGLRNLSIIHQIITQVKKDLNLDIDIEQIPFNDQKVFKLLSLGNTTGIFQLESEGVRRVLMELQPEHFEDIVAVTSLYRPGPMQEIPTYISRRHRQSDIKYLHPDLEPILKKTYGVIIYQEQIMQIASQFANFSYGQADILRRAMSKKNRAILESERQHFIEGAVSNNYDASISERIFELILKFADYGFPRAHAVSYSKIAYIMAYLKVHYPNYFYANILSNVIGNETKTAIIIEEAKTQSLNILPPDINKSHWFYKATEKNIYLSLGAIKGVGYQSVKSIVDERSENGLYKDFFDFTRRIPKKIKTRKLLEALICVGAFDSFGKTRSTLLSTIDEVIDQVSNVEQDEFLFNMLTPKQAYEDKEEFSDQIISAYEKEYLGFYISNHPVEKLFYIKQYLGIFTIKNSLDYQPILVQVNQFKQIRTKTGQHMAFLVLDDGRTTIDGVLFPDKYKQYETMSQQQNDILVVHGKFEERNQKRQIIIQSMDTINDFENNKLSQAKQIMVRNVNQLEDIKSFLIDQTTHNDLEVVLFNEMQQQTQSLGFLQKEMEQVERFIKMFKPSDIRII . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 34045 37248 . + . GCA_005502385.1_00561_mRNA GCA_005502385.1_00561 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFVHLNIHSTYDLLYSSLKINDVVSKAKENRYQALAITDTNVLYGFPKFYDACVKEGIKPIFGMTVMVSDEISTIETVLFAKNNEGLHALYQLSSAINMKQKTTIPLKWLQKYSYHLAIVFKDAHASHQSLIQTLKNNESVFINHTSQLDFSDDKIVFLNNARYLNPEDADTIPALKAIKNNTKLDLVNDIKDAHEYFPTSENIKAFQLSEKIIANTKALADECNAEIQYHQNLLPNFKTPNQQSTKSYLLEKLKYSLKEFKLDKDQRYIDRLHHEYSIITNMGFEDYFLIVSDLIHFAKTHDVMVGPGRGSSAGSLVSYLLGITTIDPIKFDLLFERFLNPERVTMPDIDIDFEDTRREKVIQYVQEKYGQYHVSGIVTFGHLLARAVARDVGRIIGFDEKTLNEISNLIPHQLGITLEEAYQNEKFKAFVHKSYRHEKWFEISKKLEGLPRHTSTHAAGIIINDKPLYDFAPLTMGDTGILTQWTMTEAERLGLLKIDFLGLRNLSIIHQIITQVKKDLNLDIDIEQIPFNDQKVFKLLSLGNTTGIFQLESEGVRRVLMELQPEHFEDIVAVTSLYRPGPMQEIPTYISRRHRQSDIKYLHPDLEPILKKTYGVIIYQEQIMQIASQFANFSYGQADILRRAMSKKNRAILESERQHFIEGAVSNNYDASISERIFELILKFADYGFPRAHAVSYSKIAYIMAYLKVHYPNYFYANILSNVIGNETKTAIIIEEAKTQSLNILPPDINKSHWFYKATEKNIYLSLGAIKGVGYQSVKSIVDERSENGLYKDFFDFTRRIPKKIKTRKLLEALICVGAFDSFGKTRSTLLSTIDEVIDQVSNVEQDEFLFNMLTPKQAYEDKEEFSDQIISAYEKEYLGFYISNHPVEKLFYIKQYLGIFTIKNSLDYQPILVQVNQFKQIRTKTGQHMAFLVLDDGRTTIDGVLFPDKYKQYETMSQQQNDILVVHGKFEERNQKRQIIIQSMDTINDFENNKLSQAKQIMVRNVNQLEDIKSFLIDQTTHNDLEVVLFNEMQQQTQSLGFLQKEMEQVERFIKMFKPSDIRII . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 34045 37248 . + 0 GCA_005502385.1_00561 GCA_005502385.1_00561_gene,GCA_005502385.1_00561_mRNA GCA_005502385.1_00561 DNA polymerase III subunit alpha GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFVHLNIHSTYDLLYSSLKINDVVSKAKENRYQALAITDTNVLYGFPKFYDACVKEGIKPIFGMTVMVSDEISTIETVLFAKNNEGLHALYQLSSAINMKQKTTIPLKWLQKYSYHLAIVFKDAHASHQSLIQTLKNNESVFINHTSQLDFSDDKIVFLNNARYLNPEDADTIPALKAIKNNTKLDLVNDIKDAHEYFPTSENIKAFQLSEKIIANTKALADECNAEIQYHQNLLPNFKTPNQQSTKSYLLEKLKYSLKEFKLDKDQRYIDRLHHEYSIITNMGFEDYFLIVSDLIHFAKTHDVMVGPGRGSSAGSLVSYLLGITTIDPIKFDLLFERFLNPERVTMPDIDIDFEDTRREKVIQYVQEKYGQYHVSGIVTFGHLLARAVARDVGRIIGFDEKTLNEISNLIPHQLGITLEEAYQNEKFKAFVHKSYRHEKWFEISKKLEGLPRHTSTHAAGIIINDKPLYDFAPLTMGDTGILTQWTMTEAERLGLLKIDFLGLRNLSIIHQIITQVKKDLNLDIDIEQIPFNDQKVFKLLSLGNTTGIFQLESEGVRRVLMELQPEHFEDIVAVTSLYRPGPMQEIPTYISRRHRQSDIKYLHPDLEPILKKTYGVIIYQEQIMQIASQFANFSYGQADILRRAMSKKNRAILESERQHFIEGAVSNNYDASISERIFELILKFADYGFPRAHAVSYSKIAYIMAYLKVHYPNYFYANILSNVIGNETKTAIIIEEAKTQSLNILPPDINKSHWFYKATEKNIYLSLGAIKGVGYQSVKSIVDERSENGLYKDFFDFTRRIPKKIKTRKLLEALICVGAFDSFGKTRSTLLSTIDEVIDQVSNVEQDEFLFNMLTPKQAYEDKEEFSDQIISAYEKEYLGFYISNHPVEKLFYIKQYLGIFTIKNSLDYQPILVQVNQFKQIRTKTGQHMAFLVLDDGRTTIDGVLFPDKYKQYETMSQQQNDILVVHGKFEERNQKRQIIIQSMDTINDFENNKLSQAKQIMVRNVNQLEDIKSFLIDQTTHNDLEVVLFNEMQQQTQSLGFLQKEMEQVERFIKMFKPSDIRII persistent 1067 DNA polymerase III subunit alpha 2.7.7.7 WP_070508287.1 UPI0008A4315E UniRef100_UPI0008A4315E,UniRef50_Q9F1K0,UniRef90_A0A974KYE8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 37443 37604 . + . GCA_005502385.1_00562_gene GCA_005502385.1_00562 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSLRDDALQMHKENQGKLKTTPYVKVTNIEELSLAYSIEAVESCKESYEESRK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 37443 37604 . + . GCA_005502385.1_00562_mRNA GCA_005502385.1_00562 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSLRDDALQMHKENQGKLKTTPYVKVTNIEELSLAYSIEAVESCKESYEESRK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 37443 37604 . + 0 GCA_005502385.1_00562 GCA_005502385.1_00562_gene,GCA_005502385.1_00562_mRNA GCA_005502385.1_00562 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSLRDDALQMHKENQGKLKTTPYVKVTNIEELSLAYSIEAVESCKESYEESRK shell 53 hypothetical protein WP_162837120.1 UPI000671E6BD UniRef100_UPI000671E6BD,UniRef50_A0A8X8GQI8,UniRef90_A0A8X8GQI8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 37912 38778 . + . GCA_005502385.1_00563_gene GCA_005502385.1_00563 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFKDFFNRSSKKKKYLTVPDSKQNDVPAGIMTKCHNCKKIMYTKELTENLNVCFNCDHHIALPAYKRIEAISDENSFKEFDKEMTSSNPLDFPGYQEKVEKDQKKTGLNEAIVTGTAELDSVKYGIAVMDSRFRMGSMGSVVGEKICRIVDYCTEHRLPFVLFSASGGARMQEGIISLMQMGKTSVSLKRHSDAGLLYVSYLTHPTTGGVSASFASVGDINLSEPKALIGFAGRRVIEQTINEKLPEDFQTAEFLLEHGQLDKVVHRKDMKATLSEILKLHQEVKTNA . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 37912 38778 . + . GCA_005502385.1_00563_mRNA GCA_005502385.1_00563 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFKDFFNRSSKKKKYLTVPDSKQNDVPAGIMTKCHNCKKIMYTKELTENLNVCFNCDHHIALPAYKRIEAISDENSFKEFDKEMTSSNPLDFPGYQEKVEKDQKKTGLNEAIVTGTAELDSVKYGIAVMDSRFRMGSMGSVVGEKICRIVDYCTEHRLPFVLFSASGGARMQEGIISLMQMGKTSVSLKRHSDAGLLYVSYLTHPTTGGVSASFASVGDINLSEPKALIGFAGRRVIEQTINEKLPEDFQTAEFLLEHGQLDKVVHRKDMKATLSEILKLHQEVKTNA . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 37912 38778 . + 0 GCA_005502385.1_00563 GCA_005502385.1_00563_gene,GCA_005502385.1_00563_mRNA GCA_005502385.1_00563 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFKDFFNRSSKKKKYLTVPDSKQNDVPAGIMTKCHNCKKIMYTKELTENLNVCFNCDHHIALPAYKRIEAISDENSFKEFDKEMTSSNPLDFPGYQEKVEKDQKKTGLNEAIVTGTAELDSVKYGIAVMDSRFRMGSMGSVVGEKICRIVDYCTEHRLPFVLFSASGGARMQEGIISLMQMGKTSVSLKRHSDAGLLYVSYLTHPTTGGVSASFASVGDINLSEPKALIGFAGRRVIEQTINEKLPEDFQTAEFLLEHGQLDKVVHRKDMKATLSEILKLHQEVKTNA persistent 288 accD acetyl-CoA carboxylase, carboxyltransferase subunit beta 6.4.1.2 GO:0003989,GO:0006633,GO:0009317 UniRef50_C0SP93,UniRef90_A0A974KYC6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 38771 39715 . + . GCA_005502385.1_00564_gene GCA_005502385.1_00564 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLDFEKSLYEIKEKINSLKESQEKNDVDLQDEIDLLEASLERERKKIYTNLKPWDRVQIARLQERPTTLDYIPYIFDSFIELHGDRNFRDDPAMIGGIGYLNNQPVTIIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFNRPIFTFIDTKGAYPGKAAEERGQSESIAKNLIEMASLKVPVIGVVIGEGGSGGALGIGITNKLLMLENSTYSVISPEGAAALLWKDSSLAKMAAETMKITAKDLLELNVVDEVINEPQGGAHRDVVFQAKQIKQSFIHQLNELNKLDGQALANHRFNKFRNIGTFIN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 38771 39715 . + . GCA_005502385.1_00564_mRNA GCA_005502385.1_00564 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLDFEKSLYEIKEKINSLKESQEKNDVDLQDEIDLLEASLERERKKIYTNLKPWDRVQIARLQERPTTLDYIPYIFDSFIELHGDRNFRDDPAMIGGIGYLNNQPVTIIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFNRPIFTFIDTKGAYPGKAAEERGQSESIAKNLIEMASLKVPVIGVVIGEGGSGGALGIGITNKLLMLENSTYSVISPEGAAALLWKDSSLAKMAAETMKITAKDLLELNVVDEVINEPQGGAHRDVVFQAKQIKQSFIHQLNELNKLDGQALANHRFNKFRNIGTFIN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 38771 39715 . + 0 GCA_005502385.1_00564 GCA_005502385.1_00564_gene,GCA_005502385.1_00564_mRNA GCA_005502385.1_00564 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLDFEKSLYEIKEKINSLKESQEKNDVDLQDEIDLLEASLERERKKIYTNLKPWDRVQIARLQERPTTLDYIPYIFDSFIELHGDRNFRDDPAMIGGIGYLNNQPVTIIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFNRPIFTFIDTKGAYPGKAAEERGQSESIAKNLIEMASLKVPVIGVVIGEGGSGGALGIGITNKLLMLENSTYSVISPEGAAALLWKDSSLAKMAAETMKITAKDLLELNVVDEVINEPQGGAHRDVVFQAKQIKQSFIHQLNELNKLDGQALANHRFNKFRNIGTFIN persistent 314 acetyl-CoA carboxylase carboxyltransferase subunit alpha 6.4.1.2 GO:0003989,GO:0006633,GO:0009317 WP_017176125.1 UPI00031F2554 UniRef100_A0A3S7GXN2,UniRef50_Q9HXZ2,UniRef90_A0A3S7GXN2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 39888 40856 . + . GCA_005502385.1_00565_gene GCA_005502385.1_00565 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKRIAVLTSGGDSPGMNAAVRAVVRKAIYNNIEVFGVYQGYQGLLDDNIHKLELGSVGDTIQRGGTFLYSARCPQFKDESVRQKGIENLHKHGIEGLVVVGGDGSYRGAQRISEETTDIKTIGIPGTIDNDINGTDFTIGFDTALNTIIDCVDKIRDTASSHARTFVVEVMGRDCGDLALWAGLSVGAETILVPEEHTDIKDVAEKIESGIKRGKKHSIVMVAEGCMSGHECAEQLTKYINVDARVSVLGHIQRGGSPSGVDRVLASRLGGYAVELLMQGQTGFGVGIQNNQLTATPFDEIFNNESHKFNTRIYDLAKELSI . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 39888 40856 . + . GCA_005502385.1_00565_mRNA GCA_005502385.1_00565 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKRIAVLTSGGDSPGMNAAVRAVVRKAIYNNIEVFGVYQGYQGLLDDNIHKLELGSVGDTIQRGGTFLYSARCPQFKDESVRQKGIENLHKHGIEGLVVVGGDGSYRGAQRISEETTDIKTIGIPGTIDNDINGTDFTIGFDTALNTIIDCVDKIRDTASSHARTFVVEVMGRDCGDLALWAGLSVGAETILVPEEHTDIKDVAEKIESGIKRGKKHSIVMVAEGCMSGHECAEQLTKYINVDARVSVLGHIQRGGSPSGVDRVLASRLGGYAVELLMQGQTGFGVGIQNNQLTATPFDEIFNNESHKFNTRIYDLAKELSI . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 39888 40856 . + 0 GCA_005502385.1_00565 GCA_005502385.1_00565_gene,GCA_005502385.1_00565_mRNA GCA_005502385.1_00565 ATP-dependent 6-phosphofructokinase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKRIAVLTSGGDSPGMNAAVRAVVRKAIYNNIEVFGVYQGYQGLLDDNIHKLELGSVGDTIQRGGTFLYSARCPQFKDESVRQKGIENLHKHGIEGLVVVGGDGSYRGAQRISEETTDIKTIGIPGTIDNDINGTDFTIGFDTALNTIIDCVDKIRDTASSHARTFVVEVMGRDCGDLALWAGLSVGAETILVPEEHTDIKDVAEKIESGIKRGKKHSIVMVAEGCMSGHECAEQLTKYINVDARVSVLGHIQRGGSPSGVDRVLASRLGGYAVELLMQGQTGFGVGIQNNQLTATPFDEIFNNESHKFNTRIYDLAKELSI persistent 322 pfkA 6-phosphofructokinase 2.7.1.11 GO:0005524,GO:0006002,GO:0006096 COG0205,G WP_017176126.1 UPI0003137A81 UniRef100_A0A8X8GLV9,UniRef50_Q8CS68,UniRef90_A0A2A1KA38 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 40874 42634 . + . GCA_005502385.1_00566_gene GCA_005502385.1_00566 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRKTKIVCTIGPASESEEMLEKLMNAGMNVARLNFSHGSHEEHKARIDSIRKVSKKLGKTIGILLDTKGPEIRTHDMKDGLIVLEKGKEVIVSMSQVEGTPEKFSVTYEDLINDVQIGSYILLDDGLVELQVKDIDKDKGEVKCDILNTGELKNKKGVNLPGVKVNLPGITDKDAADIKFGIKEDIDYIAASFVRRPSDVLDIREILEQENNDNITIFPKIENQEGIDNIEEILEVSDGLMVARGDMGVEIPPESVPIVQKDLIRKCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGQYPEEAVKTMRNIAISAEAAQDYKKLLSDRTKLVETSLVNAIGVSVAHTALNLNVKAIVAATESGSTAITISKYRPHSDIIAVTPSEHTARQLALVWGAYPVVKKGRKTTDDLLNNAVATAVATEKVGNGDLIIITAGVPTGEKGTTNMMKLHLVGDEIAKGQGVGRGSTTGKTVISKTASDLEGKDLSESIIVTNSVDESYVPYVEKAAGLITEENGITSPSAIVGLEQGIPTIIGVENATKELKNDLLITVDANQGRIFEGYANVL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 40874 42634 . + . GCA_005502385.1_00566_mRNA GCA_005502385.1_00566 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRKTKIVCTIGPASESEEMLEKLMNAGMNVARLNFSHGSHEEHKARIDSIRKVSKKLGKTIGILLDTKGPEIRTHDMKDGLIVLEKGKEVIVSMSQVEGTPEKFSVTYEDLINDVQIGSYILLDDGLVELQVKDIDKDKGEVKCDILNTGELKNKKGVNLPGVKVNLPGITDKDAADIKFGIKEDIDYIAASFVRRPSDVLDIREILEQENNDNITIFPKIENQEGIDNIEEILEVSDGLMVARGDMGVEIPPESVPIVQKDLIRKCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGQYPEEAVKTMRNIAISAEAAQDYKKLLSDRTKLVETSLVNAIGVSVAHTALNLNVKAIVAATESGSTAITISKYRPHSDIIAVTPSEHTARQLALVWGAYPVVKKGRKTTDDLLNNAVATAVATEKVGNGDLIIITAGVPTGEKGTTNMMKLHLVGDEIAKGQGVGRGSTTGKTVISKTASDLEGKDLSESIIVTNSVDESYVPYVEKAAGLITEENGITSPSAIVGLEQGIPTIIGVENATKELKNDLLITVDANQGRIFEGYANVL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 40874 42634 . + 0 GCA_005502385.1_00566 GCA_005502385.1_00566_gene,GCA_005502385.1_00566_mRNA GCA_005502385.1_00566 Pyruvate kinase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRKTKIVCTIGPASESEEMLEKLMNAGMNVARLNFSHGSHEEHKARIDSIRKVSKKLGKTIGILLDTKGPEIRTHDMKDGLIVLEKGKEVIVSMSQVEGTPEKFSVTYEDLINDVQIGSYILLDDGLVELQVKDIDKDKGEVKCDILNTGELKNKKGVNLPGVKVNLPGITDKDAADIKFGIKEDIDYIAASFVRRPSDVLDIREILEQENNDNITIFPKIENQEGIDNIEEILEVSDGLMVARGDMGVEIPPESVPIVQKDLIRKCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGQYPEEAVKTMRNIAISAEAAQDYKKLLSDRTKLVETSLVNAIGVSVAHTALNLNVKAIVAATESGSTAITISKYRPHSDIIAVTPSEHTARQLALVWGAYPVVKKGRKTTDDLLNNAVATAVATEKVGNGDLIIITAGVPTGEKGTTNMMKLHLVGDEIAKGQGVGRGSTTGKTVISKTASDLEGKDLSESIIVTNSVDESYVPYVEKAAGLITEENGITSPSAIVGLEQGIPTIIGVENATKELKNDLLITVDANQGRIFEGYANVL persistent 586 pyk pyruvate kinase 2.7.1.40 GO:0000287,GO:0004743,GO:0005524,GO:0006096,GO:0016301,GO:0030955 COG3848,T WP_017176127.1 UPI00031AC49B UniRef100_A0A3S7GXU8,UniRef50_Q02499,UniRef90_Q5HNK7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 42941 44293 . - . GCA_005502385.1_00567_gene GCA_005502385.1_00567 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAEEKLQRGLSNRHVQLIALGGAIGTGLFLGAGQTIAMTGPSILLTYIIIGFMLFMFMRGLGEIIIQNTRFKSFADVTNEYIGPFAGFVTGWTYWLCWIITGMAEVTAVAKYVSFWFPTIPNWITALFCVLILMVFNLLSAKLFGELEFWFAIIKIITIIALIVIGAIMILFAYKTQFGHASLTNLYKHGIFTNGTSGFFMSFQMALFSFVGIEMIGVTAGETKDPEKTIPKAIDAVPIRILIFYVGALAVIMSIIPWDKVDPNESPFVRLFSLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSEQKQAPSIFKSTNKQGVPHIAIIVSSALLLVTALLNYIFPNATLVFTYVTTISTVLFIIVWALIIWAYINYHRKNPELHKKAKFKLPGGKYMAYIILAFFIFVFCLLFVNATTRNAIFLTPIWFIILGIMYLRYKKVAN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 42941 44293 . - . GCA_005502385.1_00567_mRNA GCA_005502385.1_00567 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAEEKLQRGLSNRHVQLIALGGAIGTGLFLGAGQTIAMTGPSILLTYIIIGFMLFMFMRGLGEIIIQNTRFKSFADVTNEYIGPFAGFVTGWTYWLCWIITGMAEVTAVAKYVSFWFPTIPNWITALFCVLILMVFNLLSAKLFGELEFWFAIIKIITIIALIVIGAIMILFAYKTQFGHASLTNLYKHGIFTNGTSGFFMSFQMALFSFVGIEMIGVTAGETKDPEKTIPKAIDAVPIRILIFYVGALAVIMSIIPWDKVDPNESPFVRLFSLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSEQKQAPSIFKSTNKQGVPHIAIIVSSALLLVTALLNYIFPNATLVFTYVTTISTVLFIIVWALIIWAYINYHRKNPELHKKAKFKLPGGKYMAYIILAFFIFVFCLLFVNATTRNAIFLTPIWFIILGIMYLRYKKVAN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 42941 44293 . - 0 GCA_005502385.1_00567 GCA_005502385.1_00567_gene,GCA_005502385.1_00567_mRNA GCA_005502385.1_00567 D-serine/D-alanine/glycine transporter GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAEEKLQRGLSNRHVQLIALGGAIGTGLFLGAGQTIAMTGPSILLTYIIIGFMLFMFMRGLGEIIIQNTRFKSFADVTNEYIGPFAGFVTGWTYWLCWIITGMAEVTAVAKYVSFWFPTIPNWITALFCVLILMVFNLLSAKLFGELEFWFAIIKIITIIALIVIGAIMILFAYKTQFGHASLTNLYKHGIFTNGTSGFFMSFQMALFSFVGIEMIGVTAGETKDPEKTIPKAIDAVPIRILIFYVGALAVIMSIIPWDKVDPNESPFVRLFSLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSEQKQAPSIFKSTNKQGVPHIAIIVSSALLLVTALLNYIFPNATLVFTYVTTISTVLFIIVWALIIWAYINYHRKNPELHKKAKFKLPGGKYMAYIILAFFIFVFCLLFVNATTRNAIFLTPIWFIILGIMYLRYKKVAN persistent 450 ansP Amino acid permease COG1113,E WP_017176128.1 UPI0002E512DF UniRef100_A0A8X8GLA8,UniRef50_Q2FXN2,UniRef90_A0A2A1K7Z2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 44643 45761 . + . GCA_005502385.1_00568_gene GCA_005502385.1_00568 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAELQKGLEGVIAAETKISSIIDSQLTYSGYDIDDLAENAQFEEIMFLLWNYRLPTQEELEELKEKLKQYMTLNPRVYKHFEEYATDDVHPMTALRTSVSYIAHFDPDAEEETDESRKNRAIRIQAKIASLVTAFSRVREGKEPVKPNSDLSYAANFLYMLKGELPSDTEVEAFNKALILHADHELNASAFTARCAVSSLSDMYSGIVAAIGSLKGPLHGGANEQVMKMLSEVKSLDEVDNYLDKKLANKEKIMGFGHRVYKEGDPRAKYLKEMSRKITSETGHNELYEISLAIEKRMHDEKGLIPNVDFFSATVYHSMEIPHDIFTPIFAVSRTAGWTAHILEQYRDNRIIRPRAKYVGETNRKYVAVEER . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 44643 45761 . + . GCA_005502385.1_00568_mRNA GCA_005502385.1_00568 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAELQKGLEGVIAAETKISSIIDSQLTYSGYDIDDLAENAQFEEIMFLLWNYRLPTQEELEELKEKLKQYMTLNPRVYKHFEEYATDDVHPMTALRTSVSYIAHFDPDAEEETDESRKNRAIRIQAKIASLVTAFSRVREGKEPVKPNSDLSYAANFLYMLKGELPSDTEVEAFNKALILHADHELNASAFTARCAVSSLSDMYSGIVAAIGSLKGPLHGGANEQVMKMLSEVKSLDEVDNYLDKKLANKEKIMGFGHRVYKEGDPRAKYLKEMSRKITSETGHNELYEISLAIEKRMHDEKGLIPNVDFFSATVYHSMEIPHDIFTPIFAVSRTAGWTAHILEQYRDNRIIRPRAKYVGETNRKYVAVEER . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 44643 45761 . + 0 GCA_005502385.1_00568 GCA_005502385.1_00568_gene,GCA_005502385.1_00568_mRNA GCA_005502385.1_00568 Citrate synthase 2 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAELQKGLEGVIAAETKISSIIDSQLTYSGYDIDDLAENAQFEEIMFLLWNYRLPTQEELEELKEKLKQYMTLNPRVYKHFEEYATDDVHPMTALRTSVSYIAHFDPDAEEETDESRKNRAIRIQAKIASLVTAFSRVREGKEPVKPNSDLSYAANFLYMLKGELPSDTEVEAFNKALILHADHELNASAFTARCAVSSLSDMYSGIVAAIGSLKGPLHGGANEQVMKMLSEVKSLDEVDNYLDKKLANKEKIMGFGHRVYKEGDPRAKYLKEMSRKITSETGHNELYEISLAIEKRMHDEKGLIPNVDFFSATVYHSMEIPHDIFTPIFAVSRTAGWTAHILEQYRDNRIIRPRAKYVGETNRKYVAVEER persistent 372 citrate synthase 2.3.3.5 WP_017176129.1 UPI000317B272 UniRef100_A0A4V2KX46,UniRef50_P39120,UniRef90_A0A974QP78 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 45797 47068 . + . GCA_005502385.1_00569_gene GCA_005502385.1_00569 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAAEKITRANDELLNVPNEPIIPFIIGDGIGPDIWKAASRVVDAAVEKAYNGEKRIEWKEVLAGQKAYDETGEWLPQETLDTIKEYLIAIKGPLTTPIGGGIRSLNVALRQELDLFTCLRPVRWFKGVPSPVKRPQDVDMVIFRENTEDIYAGIEFKEGTEEVKKVIDFLQNEMGATNIRFPETSGIGIKPVSKEGTERLVRSAIQYAIDNNRKSVTLVHKGNIMKFTEGSFKQWGYDLAHNEFSDKVFTWQQYDDIAEKDGKDAANDAQQQAEKDGKIIIKDSIADIFLQQILTRPAEHDVVATMNLNGDYISDALAAQVGGIGIAPGANINYETGHAIFEATHGTAPKYANLNKVNPSSELLSSVLMLEHLGWQEAADKITDAIEATIASKIVTYDFARLMDGATEVSTSEFADELIKNLK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 45797 47068 . + . GCA_005502385.1_00569_mRNA GCA_005502385.1_00569 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAAEKITRANDELLNVPNEPIIPFIIGDGIGPDIWKAASRVVDAAVEKAYNGEKRIEWKEVLAGQKAYDETGEWLPQETLDTIKEYLIAIKGPLTTPIGGGIRSLNVALRQELDLFTCLRPVRWFKGVPSPVKRPQDVDMVIFRENTEDIYAGIEFKEGTEEVKKVIDFLQNEMGATNIRFPETSGIGIKPVSKEGTERLVRSAIQYAIDNNRKSVTLVHKGNIMKFTEGSFKQWGYDLAHNEFSDKVFTWQQYDDIAEKDGKDAANDAQQQAEKDGKIIIKDSIADIFLQQILTRPAEHDVVATMNLNGDYISDALAAQVGGIGIAPGANINYETGHAIFEATHGTAPKYANLNKVNPSSELLSSVLMLEHLGWQEAADKITDAIEATIASKIVTYDFARLMDGATEVSTSEFADELIKNLK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 45797 47068 . + 0 GCA_005502385.1_00569 GCA_005502385.1_00569_gene,GCA_005502385.1_00569_mRNA GCA_005502385.1_00569 Isocitrate dehydrogenase [NADP] GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAAEKITRANDELLNVPNEPIIPFIIGDGIGPDIWKAASRVVDAAVEKAYNGEKRIEWKEVLAGQKAYDETGEWLPQETLDTIKEYLIAIKGPLTTPIGGGIRSLNVALRQELDLFTCLRPVRWFKGVPSPVKRPQDVDMVIFRENTEDIYAGIEFKEGTEEVKKVIDFLQNEMGATNIRFPETSGIGIKPVSKEGTERLVRSAIQYAIDNNRKSVTLVHKGNIMKFTEGSFKQWGYDLAHNEFSDKVFTWQQYDDIAEKDGKDAANDAQQQAEKDGKIIIKDSIADIFLQQILTRPAEHDVVATMNLNGDYISDALAAQVGGIGIAPGANINYETGHAIFEATHGTAPKYANLNKVNPSSELLSSVLMLEHLGWQEAADKITDAIEATIASKIVTYDFARLMDGATEVSTSEFADELIKNLK persistent 423 icd NADP-dependent isocitrate dehydrogenase 1.1.1.42 GO:0000287,GO:0004450,GO:0006097,GO:0006099,GO:0051287 C,COG0538 WP_049381990.1 UPI00066BE02A UniRef100_UPI00066BE02A,UniRef50_Q5HNL1,UniRef90_Q8NW61 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 47293 48003 . + . GCA_005502385.1_00570_gene GCA_005502385.1_00570 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSQKVLVVDDEQSIVTLLKYNLETAGYIVDVAYDGEEALKKVKEVKPELIVLDVMLPKKDGIEVCKTIRSDKNLVPILMLTAKDDEFDRVLGLELGADDYMTKPFSPREVVARVKAILRRSQIANEVVKDDVEDEDIVIDNIRIRPEFFEVYRDDTLLELTPKEFELLLYLIERQGRVITREHMLNSVWNYEFAGDSRIVDVHISHLRDKLEENPKQPKLIKTVRGLGYKLERPKA . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 47293 48003 . + . GCA_005502385.1_00570_mRNA GCA_005502385.1_00570 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSQKVLVVDDEQSIVTLLKYNLETAGYIVDVAYDGEEALKKVKEVKPELIVLDVMLPKKDGIEVCKTIRSDKNLVPILMLTAKDDEFDRVLGLELGADDYMTKPFSPREVVARVKAILRRSQIANEVVKDDVEDEDIVIDNIRIRPEFFEVYRDDTLLELTPKEFELLLYLIERQGRVITREHMLNSVWNYEFAGDSRIVDVHISHLRDKLEENPKQPKLIKTVRGLGYKLERPKA . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 47293 48003 . + 0 GCA_005502385.1_00570 GCA_005502385.1_00570_gene,GCA_005502385.1_00570_mRNA GCA_005502385.1_00570 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSQKVLVVDDEQSIVTLLKYNLETAGYIVDVAYDGEEALKKVKEVKPELIVLDVMLPKKDGIEVCKTIRSDKNLVPILMLTAKDDEFDRVLGLELGADDYMTKPFSPREVVARVKAILRRSQIANEVVKDDVEDEDIVIDNIRIRPEFFEVYRDDTLLELTPKEFELLLYLIERQGRVITREHMLNSVWNYEFAGDSRIVDVHISHLRDKLEENPKQPKLIKTVRGLGYKLERPKA persistent 236 ompR Alkaline phosphatase synthesis transcriptional regulatory protein PhoP COG0745,TK WP_017176131.1 UPI0002E58A42 UniRef100_A0A4Q9WPP4,UniRef50_K1LRI2,UniRef90_Q5HNL2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 48003 49700 . + . GCA_005502385.1_00571_gene GCA_005502385.1_00571 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIKFHHRLLLLLCTITIISFIGLGAILHHTIYQILSDTQTRELNHLSENIVNLNKRNKQADIQRIAQNQNLVVKISENGHVLYQTGNQHQINHTIDNAANPSNIIYHKNKDKVDYTFKNTVSNQTIYISGINTEILDLQKNMWKYLSLIGIIVLFAIYLAVRSINRTYIRPINEVTYATSLIADGYYHVRVPESNVKETKALFVTTNDLARRLQKLNNKQKMQSNRLKTTLENIPSSVLMIDKQGEIVIANHAYYEVFKPDSKVENKDYTVHLDKEIQHLIIESFKTEKPLHEQIELYINDVHQKYFDVSCIPILSKSKKKLQGMVVVLHDITNLKKLENLRREFVANVSHELKTPITSIKGFAETLIEGAKNDEQSLDMFLNIILKESNRIESLVMDLLDLSHIEQQTEIETTYVNLSDLAHNTIHNLQTQAKYKNIAIKSEIENDVIIEAHEGKLSQVITNLLSNAINYSYENNKVIVRVYREDIKVNLEIQDYGIGIDKKDQKHIFERFYRVDKARSRDSGGTGLGLSITKHIVEALHGTIMVESELNKGSLFRVSFIDKIE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 48003 49700 . + . GCA_005502385.1_00571_mRNA GCA_005502385.1_00571 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIKFHHRLLLLLCTITIISFIGLGAILHHTIYQILSDTQTRELNHLSENIVNLNKRNKQADIQRIAQNQNLVVKISENGHVLYQTGNQHQINHTIDNAANPSNIIYHKNKDKVDYTFKNTVSNQTIYISGINTEILDLQKNMWKYLSLIGIIVLFAIYLAVRSINRTYIRPINEVTYATSLIADGYYHVRVPESNVKETKALFVTTNDLARRLQKLNNKQKMQSNRLKTTLENIPSSVLMIDKQGEIVIANHAYYEVFKPDSKVENKDYTVHLDKEIQHLIIESFKTEKPLHEQIELYINDVHQKYFDVSCIPILSKSKKKLQGMVVVLHDITNLKKLENLRREFVANVSHELKTPITSIKGFAETLIEGAKNDEQSLDMFLNIILKESNRIESLVMDLLDLSHIEQQTEIETTYVNLSDLAHNTIHNLQTQAKYKNIAIKSEIENDVIIEAHEGKLSQVITNLLSNAINYSYENNKVIVRVYREDIKVNLEIQDYGIGIDKKDQKHIFERFYRVDKARSRDSGGTGLGLSITKHIVEALHGTIMVESELNKGSLFRVSFIDKIE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 48003 49700 . + 0 GCA_005502385.1_00571 GCA_005502385.1_00571_gene,GCA_005502385.1_00571_mRNA GCA_005502385.1_00571 Alkaline phosphatase synthesis sensor protein PhoR GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIKFHHRLLLLLCTITIISFIGLGAILHHTIYQILSDTQTRELNHLSENIVNLNKRNKQADIQRIAQNQNLVVKISENGHVLYQTGNQHQINHTIDNAANPSNIIYHKNKDKVDYTFKNTVSNQTIYISGINTEILDLQKNMWKYLSLIGIIVLFAIYLAVRSINRTYIRPINEVTYATSLIADGYYHVRVPESNVKETKALFVTTNDLARRLQKLNNKQKMQSNRLKTTLENIPSSVLMIDKQGEIVIANHAYYEVFKPDSKVENKDYTVHLDKEIQHLIIESFKTEKPLHEQIELYINDVHQKYFDVSCIPILSKSKKKLQGMVVVLHDITNLKKLENLRREFVANVSHELKTPITSIKGFAETLIEGAKNDEQSLDMFLNIILKESNRIESLVMDLLDLSHIEQQTEIETTYVNLSDLAHNTIHNLQTQAKYKNIAIKSEIENDVIIEAHEGKLSQVITNLLSNAINYSYENNKVIVRVYREDIKVNLEIQDYGIGIDKKDQKHIFERFYRVDKARSRDSGGTGLGLSITKHIVEALHGTIMVESELNKGSLFRVSFIDKIE persistent 565 pnpS two-component system histidine kinase PnpS GO:0000155,GO:0016310 WP_048681004.1 UPI000660AD49 UniRef100_UPI000660AD49,UniRef50_A0A380G833,UniRef90_A0A3S7H0F9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 49881 52517 . + . GCA_005502385.1_00572_gene GCA_005502385.1_00572 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNKLVLIDGNSLSFRAFYALPLLSNKAGIHTNAILGFAKLLEKIIREEQPTHFLVAFDAGKTTFRHSKYSEYKGGRQKTPPELSEQFPYIRQLLDAYHIKHYELENYEADDIIGTLSKEADQNDFETIIVTGDRDLTQLATQNVTIYYTKKGVTDVDHYTPEFIAEKYNGLKPIQIIDMKGLMGDSSDNIPGVAGVGEKTAIKLLNQFDSVEGVYENIDKVSGKKLKEKLELSHEDALMSKELATINRHSPIEVTLSDTKLSDIKDNHEKIELFKKLEFKQLLADIDNEVSEFEQEQKQVSFDILPTFEYVDFNHLDEAVIHFEIDGSNYLKDDILKFGFYDKERYIVVDADNIKDYPELIKWLENENSKKVVYDAKKTFVIAHRLNITIQNIVFDAMLASYIIDPSRTIDDVYSVVTNYHQTYVKEDVSIYGKGKKRQVPNAEILNTHIASITKSIDAVKPLMEKELESHQQMNLLKDLELPLARILSKMEEIGIYTDVNDLQRMQQELQEKLELLVQRIHDAAGEEFNINSPKQLGVVLFETLKLPVIKKTKTGYSTAVDVLEQLQNEHPIINDILEYRQLAKLQSTYVEGLQKVISNDKRIHTRFNQTLAQTGRLSSVDPNLQNIPIRLEEGRKIRKAFKPSSEDSVILSADYSQIELRVLAHITQDDSLKEAFIHGQDIHTATARKVFGVEAEEVTDLMRRQAKAVNFGIVYGISDYGLSQSLNITRKEAKIFIDDYLASFPGVKQYMSDIVKDAKANGYVETLLHRRRYIPDITSRNFNLRGFAERTAMNTPIQGSAADIIKLAMVEFDKQVQHTSYKAKLLLQVHDELIFEVPKSEVEEFSLFVEDIMEHALDLDVPLKVDSNYGPTWYDAK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 49881 52517 . + . GCA_005502385.1_00572_mRNA GCA_005502385.1_00572 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNKLVLIDGNSLSFRAFYALPLLSNKAGIHTNAILGFAKLLEKIIREEQPTHFLVAFDAGKTTFRHSKYSEYKGGRQKTPPELSEQFPYIRQLLDAYHIKHYELENYEADDIIGTLSKEADQNDFETIIVTGDRDLTQLATQNVTIYYTKKGVTDVDHYTPEFIAEKYNGLKPIQIIDMKGLMGDSSDNIPGVAGVGEKTAIKLLNQFDSVEGVYENIDKVSGKKLKEKLELSHEDALMSKELATINRHSPIEVTLSDTKLSDIKDNHEKIELFKKLEFKQLLADIDNEVSEFEQEQKQVSFDILPTFEYVDFNHLDEAVIHFEIDGSNYLKDDILKFGFYDKERYIVVDADNIKDYPELIKWLENENSKKVVYDAKKTFVIAHRLNITIQNIVFDAMLASYIIDPSRTIDDVYSVVTNYHQTYVKEDVSIYGKGKKRQVPNAEILNTHIASITKSIDAVKPLMEKELESHQQMNLLKDLELPLARILSKMEEIGIYTDVNDLQRMQQELQEKLELLVQRIHDAAGEEFNINSPKQLGVVLFETLKLPVIKKTKTGYSTAVDVLEQLQNEHPIINDILEYRQLAKLQSTYVEGLQKVISNDKRIHTRFNQTLAQTGRLSSVDPNLQNIPIRLEEGRKIRKAFKPSSEDSVILSADYSQIELRVLAHITQDDSLKEAFIHGQDIHTATARKVFGVEAEEVTDLMRRQAKAVNFGIVYGISDYGLSQSLNITRKEAKIFIDDYLASFPGVKQYMSDIVKDAKANGYVETLLHRRRYIPDITSRNFNLRGFAERTAMNTPIQGSAADIIKLAMVEFDKQVQHTSYKAKLLLQVHDELIFEVPKSEVEEFSLFVEDIMEHALDLDVPLKVDSNYGPTWYDAK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 49881 52517 . + 0 GCA_005502385.1_00572 GCA_005502385.1_00572_gene,GCA_005502385.1_00572_mRNA GCA_005502385.1_00572 DNA polymerase I GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNKLVLIDGNSLSFRAFYALPLLSNKAGIHTNAILGFAKLLEKIIREEQPTHFLVAFDAGKTTFRHSKYSEYKGGRQKTPPELSEQFPYIRQLLDAYHIKHYELENYEADDIIGTLSKEADQNDFETIIVTGDRDLTQLATQNVTIYYTKKGVTDVDHYTPEFIAEKYNGLKPIQIIDMKGLMGDSSDNIPGVAGVGEKTAIKLLNQFDSVEGVYENIDKVSGKKLKEKLELSHEDALMSKELATINRHSPIEVTLSDTKLSDIKDNHEKIELFKKLEFKQLLADIDNEVSEFEQEQKQVSFDILPTFEYVDFNHLDEAVIHFEIDGSNYLKDDILKFGFYDKERYIVVDADNIKDYPELIKWLENENSKKVVYDAKKTFVIAHRLNITIQNIVFDAMLASYIIDPSRTIDDVYSVVTNYHQTYVKEDVSIYGKGKKRQVPNAEILNTHIASITKSIDAVKPLMEKELESHQQMNLLKDLELPLARILSKMEEIGIYTDVNDLQRMQQELQEKLELLVQRIHDAAGEEFNINSPKQLGVVLFETLKLPVIKKTKTGYSTAVDVLEQLQNEHPIINDILEYRQLAKLQSTYVEGLQKVISNDKRIHTRFNQTLAQTGRLSSVDPNLQNIPIRLEEGRKIRKAFKPSSEDSVILSADYSQIELRVLAHITQDDSLKEAFIHGQDIHTATARKVFGVEAEEVTDLMRRQAKAVNFGIVYGISDYGLSQSLNITRKEAKIFIDDYLASFPGVKQYMSDIVKDAKANGYVETLLHRRRYIPDITSRNFNLRGFAERTAMNTPIQGSAADIIKLAMVEFDKQVQHTSYKAKLLLQVHDELIFEVPKSEVEEFSLFVEDIMEHALDLDVPLKVDSNYGPTWYDAK persistent 878 polA DNA polymerase I 2.7.7.7 GO:0003676,GO:0003677,GO:0003887,GO:0006261,GO:0008408 WP_049381991.1 UPI00066C20F7 UniRef100_UPI00066C20F7,UniRef50_K9B5S8,UniRef90_A0A3S7GXE5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 52533 53405 . + . GCA_005502385.1_00573_gene GCA_005502385.1_00573 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPELPEVEHVKRGIEPFIVNTTIKSISFSKKVIEGKSQNKETIIKGMNLDGFRLNCEGYKIIKVERRSKYIVFHIEKHNRKRVLLSHLGMAGGFFIVNHLSEIAIPNYRKHWHVIFHLNNGKKLVFSDIRRFGEIRNLNSFEDYPSFLEIAPEPFDEEALQHFNHYLSQKKVANKPIKQMLLDHKIVAGCGNIYACEALFRAGIHPARKVKDTSHQERQMLFYYVQEVLKEGIDNGGTSISDYRHADGKTGQMQLHLNVYKQKTCKVCGHDIEQKVIASRNSHFCPYCQK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 52533 53405 . + . GCA_005502385.1_00573_mRNA GCA_005502385.1_00573 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPELPEVEHVKRGIEPFIVNTTIKSISFSKKVIEGKSQNKETIIKGMNLDGFRLNCEGYKIIKVERRSKYIVFHIEKHNRKRVLLSHLGMAGGFFIVNHLSEIAIPNYRKHWHVIFHLNNGKKLVFSDIRRFGEIRNLNSFEDYPSFLEIAPEPFDEEALQHFNHYLSQKKVANKPIKQMLLDHKIVAGCGNIYACEALFRAGIHPARKVKDTSHQERQMLFYYVQEVLKEGIDNGGTSISDYRHADGKTGQMQLHLNVYKQKTCKVCGHDIEQKVIASRNSHFCPYCQK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 52533 53405 . + 0 GCA_005502385.1_00573 GCA_005502385.1_00573_gene,GCA_005502385.1_00573_mRNA GCA_005502385.1_00573 Formamidopyrimidine-DNA glycosylase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPELPEVEHVKRGIEPFIVNTTIKSISFSKKVIEGKSQNKETIIKGMNLDGFRLNCEGYKIIKVERRSKYIVFHIEKHNRKRVLLSHLGMAGGFFIVNHLSEIAIPNYRKHWHVIFHLNNGKKLVFSDIRRFGEIRNLNSFEDYPSFLEIAPEPFDEEALQHFNHYLSQKKVANKPIKQMLLDHKIVAGCGNIYACEALFRAGIHPARKVKDTSHQERQMLFYYVQEVLKEGIDNGGTSISDYRHADGKTGQMQLHLNVYKQKTCKVCGHDIEQKVIASRNSHFCPYCQK persistent 290 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 3.2.2.23,4.2.99.18 GO:0003676,GO:0003684,GO:0003906,GO:0006281,GO:0006284,GO:0008270,GO:0008534,GO:0016799,GO:0019104 WP_017176134.1 UPI0002D8B8A7 UniRef100_A0A3S7GXV4,UniRef50_A0A7T1B1X4,UniRef90_A0A3S7GXV4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 53427 54029 . + . GCA_005502385.1_00574_gene GCA_005502385.1_00574 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPKVIGLTGGIATGKSTVSKLLSEYGFKIVDADIASRKAVEKGSTALERIKETFGDEAITSDGEMNREYIGELVFNHPEKRLELNEIIHPIVRTIMEQEKQHYVQQGYDVIMDIPLLFENDLQDTVDEVWLVYTSESVQIERLMKRNNLDLDQAKARVHSQISIDKKSRMADHVIDNLGSKSELETILKQLLIEKGYIHE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 53427 54029 . + . GCA_005502385.1_00574_mRNA GCA_005502385.1_00574 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPKVIGLTGGIATGKSTVSKLLSEYGFKIVDADIASRKAVEKGSTALERIKETFGDEAITSDGEMNREYIGELVFNHPEKRLELNEIIHPIVRTIMEQEKQHYVQQGYDVIMDIPLLFENDLQDTVDEVWLVYTSESVQIERLMKRNNLDLDQAKARVHSQISIDKKSRMADHVIDNLGSKSELETILKQLLIEKGYIHE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 53427 54029 . + 0 GCA_005502385.1_00574 GCA_005502385.1_00574_gene,GCA_005502385.1_00574_mRNA GCA_005502385.1_00574 Dephospho-CoA kinase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPKVIGLTGGIATGKSTVSKLLSEYGFKIVDADIASRKAVEKGSTALERIKETFGDEAITSDGEMNREYIGELVFNHPEKRLELNEIIHPIVRTIMEQEKQHYVQQGYDVIMDIPLLFENDLQDTVDEVWLVYTSESVQIERLMKRNNLDLDQAKARVHSQISIDKKSRMADHVIDNLGSKSELETILKQLLIEKGYIHE persistent 200 coaE dephospho-CoA kinase 2.7.1.24 GO:0004140,GO:0005524,GO:0005737,GO:0015937 WP_017176135.1 UPI0002FBF160 UniRef100_A0A3S7GXP2,UniRef50_Q49YB9,UniRef90_A0A3S7GXP2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 54223 55248 . + . GCA_005502385.1_00575_gene GCA_005502385.1_00575 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSTNIAINGMGRIGRMVLRIALHNENFNVVAINASYPPETIAHLINYDTTHGRYDKKVEPIDDGIRVDNHDIKLVSDRNPENLPWKDLNIDIVIEATGKFNHGDKAVGHIRAGAKKVLLTGPSKGGEVQMIVKGVNDDKLDVEKYDIFSNASCTTNCIGPVAKVLNDQFGIVNGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALKEVLPELEGKLHGLALRVPTKNVSLVDLVVDLEKPVTVDEINNAFRHSDLDGVLEVEHAPLVSVDFNTNPHSAIIDAENTIVMDDHKVKVIAWYDNEWGYSNRVVEVAEMIGEQLVEKSTVTAV . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 54223 55248 . + . GCA_005502385.1_00575_mRNA GCA_005502385.1_00575 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSTNIAINGMGRIGRMVLRIALHNENFNVVAINASYPPETIAHLINYDTTHGRYDKKVEPIDDGIRVDNHDIKLVSDRNPENLPWKDLNIDIVIEATGKFNHGDKAVGHIRAGAKKVLLTGPSKGGEVQMIVKGVNDDKLDVEKYDIFSNASCTTNCIGPVAKVLNDQFGIVNGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALKEVLPELEGKLHGLALRVPTKNVSLVDLVVDLEKPVTVDEINNAFRHSDLDGVLEVEHAPLVSVDFNTNPHSAIIDAENTIVMDDHKVKVIAWYDNEWGYSNRVVEVAEMIGEQLVEKSTVTAV . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 54223 55248 . + 0 GCA_005502385.1_00575 GCA_005502385.1_00575_gene,GCA_005502385.1_00575_mRNA GCA_005502385.1_00575 Glyceraldehyde-3-phosphate dehydrogenase 2 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSTNIAINGMGRIGRMVLRIALHNENFNVVAINASYPPETIAHLINYDTTHGRYDKKVEPIDDGIRVDNHDIKLVSDRNPENLPWKDLNIDIVIEATGKFNHGDKAVGHIRAGAKKVLLTGPSKGGEVQMIVKGVNDDKLDVEKYDIFSNASCTTNCIGPVAKVLNDQFGIVNGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALKEVLPELEGKLHGLALRVPTKNVSLVDLVVDLEKPVTVDEINNAFRHSDLDGVLEVEHAPLVSVDFNTNPHSAIIDAENTIVMDDHKVKVIAWYDNEWGYSNRVVEVAEMIGEQLVEKSTVTAV persistent 341 gap type I glyceraldehyde-3-phosphate dehydrogenase GO:0006006,GO:0016620,GO:0050661,GO:0051287 WP_017176136.1 UPI00030CADE5 UniRef100_A0A3S7GY13,UniRef50_P80505,UniRef90_A0A3S7GY13 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 55536 56006 . + . GCA_005502385.1_00576_gene GCA_005502385.1_00576 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKCPKCSATHSRVVDSRHADEANAIRRRRECENCGTRFTTFEHIEVSPLIVVKKDGTREQFLREKILNGLVRSCEKRPVRYQQLEDITNKVEWQLRDKGHTEISSRDIGEHVMNLLMHVDQVSYVRFASVYKEFKDVDQLLASMQGILDDNKRSDS . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 55536 56006 . + . GCA_005502385.1_00576_mRNA GCA_005502385.1_00576 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKCPKCSATHSRVVDSRHADEANAIRRRRECENCGTRFTTFEHIEVSPLIVVKKDGTREQFLREKILNGLVRSCEKRPVRYQQLEDITNKVEWQLRDKGHTEISSRDIGEHVMNLLMHVDQVSYVRFASVYKEFKDVDQLLASMQGILDDNKRSDS . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 55536 56006 . + 0 GCA_005502385.1_00576 GCA_005502385.1_00576_gene,GCA_005502385.1_00576_mRNA GCA_005502385.1_00576 Transcriptional repressor NrdR GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKCPKCSATHSRVVDSRHADEANAIRRRRECENCGTRFTTFEHIEVSPLIVVKKDGTREQFLREKILNGLVRSCEKRPVRYQQLEDITNKVEWQLRDKGHTEISSRDIGEHVMNLLMHVDQVSYVRFASVYKEFKDVDQLLASMQGILDDNKRSDS persistent 156 nrdR transcriptional regulator NrdR GO:0003677,GO:0005524,GO:0006355,GO:0008270,GO:0045892,GO:0140110 COG1327,K WP_017176137.1 UPI0002E67C91 UniRef100_A0A8X8KJJ5,UniRef50_Q5M5X8,UniRef90_Q2FXP3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 56007 57377 . + . GCA_005502385.1_00577_gene GCA_005502385.1_00577 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSFKSYEYGLSPHDGFKVYRHFFFNHQQLEILNRLYIPLIGFKAIGVYHFMNQFIDEVEDTILTHYTIMNELKINLLEFREYMDLLEGIGLIKTFVKHDSNQSMFIYELIQPPTAYQFFNDPMLSIYLYNEVDNRRYKDLKAYFEKNEPDLNAFQQVTRKFTDVFKVPHKNISIDASTIQKENHSATIDLDNESFDFDMLRDMLQHHFISGEIITKEAKQLILQLATLYGLTPTSMKRIILNSITQNQTLSFEEMRKQARSHYLIEHQQQLPKLQTKANPSNHLEQSQSPNETTDDIKESDSWFKLLEDTSPIDMLASWSESEPTLQQKRMVEELIEREKLSFGVINILLQFVMLKNEMKLPKSYIFEIASNWKKLGIKTAQQAYDYALKTNQQINDSITKKTKRQYKQRDVASIEKTPKWLKNKNQQDEKPNNNDAQFEKDREAFRAQLEQDWED . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 56007 57377 . + . GCA_005502385.1_00577_mRNA GCA_005502385.1_00577 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSFKSYEYGLSPHDGFKVYRHFFFNHQQLEILNRLYIPLIGFKAIGVYHFMNQFIDEVEDTILTHYTIMNELKINLLEFREYMDLLEGIGLIKTFVKHDSNQSMFIYELIQPPTAYQFFNDPMLSIYLYNEVDNRRYKDLKAYFEKNEPDLNAFQQVTRKFTDVFKVPHKNISIDASTIQKENHSATIDLDNESFDFDMLRDMLQHHFISGEIITKEAKQLILQLATLYGLTPTSMKRIILNSITQNQTLSFEEMRKQARSHYLIEHQQQLPKLQTKANPSNHLEQSQSPNETTDDIKESDSWFKLLEDTSPIDMLASWSESEPTLQQKRMVEELIEREKLSFGVINILLQFVMLKNEMKLPKSYIFEIASNWKKLGIKTAQQAYDYALKTNQQINDSITKKTKRQYKQRDVASIEKTPKWLKNKNQQDEKPNNNDAQFEKDREAFRAQLEQDWED . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 56007 57377 . + 0 GCA_005502385.1_00577 GCA_005502385.1_00577_gene,GCA_005502385.1_00577_mRNA GCA_005502385.1_00577 Replication initiation and membrane attachment protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSFKSYEYGLSPHDGFKVYRHFFFNHQQLEILNRLYIPLIGFKAIGVYHFMNQFIDEVEDTILTHYTIMNELKINLLEFREYMDLLEGIGLIKTFVKHDSNQSMFIYELIQPPTAYQFFNDPMLSIYLYNEVDNRRYKDLKAYFEKNEPDLNAFQQVTRKFTDVFKVPHKNISIDASTIQKENHSATIDLDNESFDFDMLRDMLQHHFISGEIITKEAKQLILQLATLYGLTPTSMKRIILNSITQNQTLSFEEMRKQARSHYLIEHQQQLPKLQTKANPSNHLEQSQSPNETTDDIKESDSWFKLLEDTSPIDMLASWSESEPTLQQKRMVEELIEREKLSFGVINILLQFVMLKNEMKLPKSYIFEIASNWKKLGIKTAQQAYDYALKTNQQINDSITKKTKRQYKQRDVASIEKTPKWLKNKNQQDEKPNNNDAQFEKDREAFRAQLEQDWED persistent 456 dnaD DnaD domain protein WP_017176138.1 UPI0002DD0A44 UniRef100_A0A3S7GZZ9,UniRef50_A0A7X9ZKD6,UniRef90_A0A3S7GZZ9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 57378 58298 . + . GCA_005502385.1_00578_gene GCA_005502385.1_00578 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKPFSKLIKNQDNLNKRIAKIKNQVINDSDVKQFLNQHQSELTNEMIDKDLNVLQEYKDQQKHYDGHDYAHCPNFVKGHIPELYIENERIKVRYRLCPCKIKYDEERLSSQLITAHHMQRDTLNAKVKDIYTNDRSRLEIAMEVNDICKKLVNGERVKGLYIHGPFGTGKSFILGAIANQLKSKHVPSTIVYLPEYIRILKGGFKDGSYNEKLERIREANILMLDDIGAEDVTTWVRDEVIGPLLHYRMVHELPTFFSSNLNLEELEHHLSISNKGAEITKAARIIERIKSLANEFYLDGKNLRNN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 57378 58298 . + . GCA_005502385.1_00578_mRNA GCA_005502385.1_00578 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKPFSKLIKNQDNLNKRIAKIKNQVINDSDVKQFLNQHQSELTNEMIDKDLNVLQEYKDQQKHYDGHDYAHCPNFVKGHIPELYIENERIKVRYRLCPCKIKYDEERLSSQLITAHHMQRDTLNAKVKDIYTNDRSRLEIAMEVNDICKKLVNGERVKGLYIHGPFGTGKSFILGAIANQLKSKHVPSTIVYLPEYIRILKGGFKDGSYNEKLERIREANILMLDDIGAEDVTTWVRDEVIGPLLHYRMVHELPTFFSSNLNLEELEHHLSISNKGAEITKAARIIERIKSLANEFYLDGKNLRNN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 57378 58298 . + 0 GCA_005502385.1_00578 GCA_005502385.1_00578_gene,GCA_005502385.1_00578_mRNA GCA_005502385.1_00578 Primosomal protein DnaI GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKPFSKLIKNQDNLNKRIAKIKNQVINDSDVKQFLNQHQSELTNEMIDKDLNVLQEYKDQQKHYDGHDYAHCPNFVKGHIPELYIENERIKVRYRLCPCKIKYDEERLSSQLITAHHMQRDTLNAKVKDIYTNDRSRLEIAMEVNDICKKLVNGERVKGLYIHGPFGTGKSFILGAIANQLKSKHVPSTIVYLPEYIRILKGGFKDGSYNEKLERIREANILMLDDIGAEDVTTWVRDEVIGPLLHYRMVHELPTFFSSNLNLEELEHHLSISNKGAEITKAARIIERIKSLANEFYLDGKNLRNN persistent 306 dnaI primosomal protein DnaI WP_048761548.1 UPI00065F840D UniRef100_UPI00065F840D,UniRef50_Q2FXP5,UniRef90_A0A3S7H0V3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 58609 60546 . + . GCA_005502385.1_00579_gene GCA_005502385.1_00579 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEQINIKFPDGNSKSFDKGTTTEDIAQSISPGLRKKAVAGKFNNQLVDLTRPLEEDGAIEIVTPGSDEALEVLRHSTAHLMAQALKRIYGDVKFGVGPVIEGGFYYDFDMDEKVSSDDFEKIEKTMKQIVNENYKIERKVVSREEAKDFFKDDPYKLELIDAIPEDENVTLYSQGEFTDLCRGVHVPSTSKIKEFKLLSTAGAYWRGDSDNKMLQRIYGTAFFDKKDLKAHLEMLEERRERDHRRIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVELYKTSGHWDHYRDDMFPPMKLDETEEMVLRPMNCPHHMMVYNNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKDEFKRVVHMIQDVYEDFGFEDYTFRLSYRDPEDKEKYMDDDDMWNKAESMLKEAVDEMGLPYVEAIGEAAFYGPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLSYIGSDGENHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVEIIPVNVDLHYDYARNLQDELKSQGVRVEIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNEVNVRKYGSQDQETIERDEFIWNLVDEIRLKKRR . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 58609 60546 . + . GCA_005502385.1_00579_mRNA GCA_005502385.1_00579 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEQINIKFPDGNSKSFDKGTTTEDIAQSISPGLRKKAVAGKFNNQLVDLTRPLEEDGAIEIVTPGSDEALEVLRHSTAHLMAQALKRIYGDVKFGVGPVIEGGFYYDFDMDEKVSSDDFEKIEKTMKQIVNENYKIERKVVSREEAKDFFKDDPYKLELIDAIPEDENVTLYSQGEFTDLCRGVHVPSTSKIKEFKLLSTAGAYWRGDSDNKMLQRIYGTAFFDKKDLKAHLEMLEERRERDHRRIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVELYKTSGHWDHYRDDMFPPMKLDETEEMVLRPMNCPHHMMVYNNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKDEFKRVVHMIQDVYEDFGFEDYTFRLSYRDPEDKEKYMDDDDMWNKAESMLKEAVDEMGLPYVEAIGEAAFYGPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLSYIGSDGENHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVEIIPVNVDLHYDYARNLQDELKSQGVRVEIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNEVNVRKYGSQDQETIERDEFIWNLVDEIRLKKRR . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 58609 60546 . + 0 GCA_005502385.1_00579 GCA_005502385.1_00579_gene,GCA_005502385.1_00579_mRNA GCA_005502385.1_00579 Threonine--tRNA ligase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEQINIKFPDGNSKSFDKGTTTEDIAQSISPGLRKKAVAGKFNNQLVDLTRPLEEDGAIEIVTPGSDEALEVLRHSTAHLMAQALKRIYGDVKFGVGPVIEGGFYYDFDMDEKVSSDDFEKIEKTMKQIVNENYKIERKVVSREEAKDFFKDDPYKLELIDAIPEDENVTLYSQGEFTDLCRGVHVPSTSKIKEFKLLSTAGAYWRGDSDNKMLQRIYGTAFFDKKDLKAHLEMLEERRERDHRRIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVELYKTSGHWDHYRDDMFPPMKLDETEEMVLRPMNCPHHMMVYNNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKDEFKRVVHMIQDVYEDFGFEDYTFRLSYRDPEDKEKYMDDDDMWNKAESMLKEAVDEMGLPYVEAIGEAAFYGPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLSYIGSDGENHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVEIIPVNVDLHYDYARNLQDELKSQGVRVEIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNEVNVRKYGSQDQETIERDEFIWNLVDEIRLKKRR persistent 645 thrS threonine--tRNA ligase 6.1.1.3 GO:0000049,GO:0004829,GO:0005524,GO:0005737,GO:0006435,GO:0016740,GO:0046872 COG0441,J WP_037541057.1 UPI00044EF5F2 UniRef100_A0A3S7GXB3,UniRef50_P18255,UniRef90_B9DNC9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 60595 60770 . + . GCA_005502385.1_00580_gene GCA_005502385.1_00580 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 60595 60770 . + . GCA_005502385.1_00580_mRNA GCA_005502385.1_00580 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 Infernal:001001 misc_RNA 60595 60770 109.4 + . GCA_005502385.1_00580 GCA_005502385.1_00580_gene,GCA_005502385.1_00580_mRNA GCA_005502385.1_00580 Lysine GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 60923 62416 . + . GCA_005502385.1_00581_gene GCA_005502385.1_00581 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKVENQDSGMKRGLKDRHISMIAMGGCIGTGLFMTSGGAIHDAGALGALIAYAIIGAMVFFLMTSLGEMATYLPVSGSFSTYATRFVDPSLGFALGWNYWFNWVITVAADVTIAAQVIQYWTPMAGIPAWVWSCIFIVIIFALNSLSVRVYGESEYWFALIKVITVIIFIIIGILTILGIMGGHFVGFETFTKGDGPILGGNLGGSLLSILGVFLVAGFSFQGTELIGITAGESENPERAVPKAIKQVFWRILLFYILAIFVIGMLIPYNSNALMGGDNDVATSPFTLVFKNAGLAFAASFMNAVILTSVLSAGNSGMYASTRMLYSMSKDKLAFASFGKTNKHGVPYLSLIATGVLVVVIFLVQKLSGNAYEYIVAASGMTGFIAWVGIAVSHYRFRRAFNVQHHRKSELKYKAKWFPFGPIFAGILCVIVIVGQDVDFIKTGHFDLNRFIITYMGIPVFLVFFIYHKLRYKTKKIPLEEVDLSQDVSMNEVKHH . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 60923 62416 . + . GCA_005502385.1_00581_mRNA GCA_005502385.1_00581 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKVENQDSGMKRGLKDRHISMIAMGGCIGTGLFMTSGGAIHDAGALGALIAYAIIGAMVFFLMTSLGEMATYLPVSGSFSTYATRFVDPSLGFALGWNYWFNWVITVAADVTIAAQVIQYWTPMAGIPAWVWSCIFIVIIFALNSLSVRVYGESEYWFALIKVITVIIFIIIGILTILGIMGGHFVGFETFTKGDGPILGGNLGGSLLSILGVFLVAGFSFQGTELIGITAGESENPERAVPKAIKQVFWRILLFYILAIFVIGMLIPYNSNALMGGDNDVATSPFTLVFKNAGLAFAASFMNAVILTSVLSAGNSGMYASTRMLYSMSKDKLAFASFGKTNKHGVPYLSLIATGVLVVVIFLVQKLSGNAYEYIVAASGMTGFIAWVGIAVSHYRFRRAFNVQHHRKSELKYKAKWFPFGPIFAGILCVIVIVGQDVDFIKTGHFDLNRFIITYMGIPVFLVFFIYHKLRYKTKKIPLEEVDLSQDVSMNEVKHH . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 60923 62416 . + 0 GCA_005502385.1_00581 GCA_005502385.1_00581_gene,GCA_005502385.1_00581_mRNA GCA_005502385.1_00581 Lysine-specific permease GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKVENQDSGMKRGLKDRHISMIAMGGCIGTGLFMTSGGAIHDAGALGALIAYAIIGAMVFFLMTSLGEMATYLPVSGSFSTYATRFVDPSLGFALGWNYWFNWVITVAADVTIAAQVIQYWTPMAGIPAWVWSCIFIVIIFALNSLSVRVYGESEYWFALIKVITVIIFIIIGILTILGIMGGHFVGFETFTKGDGPILGGNLGGSLLSILGVFLVAGFSFQGTELIGITAGESENPERAVPKAIKQVFWRILLFYILAIFVIGMLIPYNSNALMGGDNDVATSPFTLVFKNAGLAFAASFMNAVILTSVLSAGNSGMYASTRMLYSMSKDKLAFASFGKTNKHGVPYLSLIATGVLVVVIFLVQKLSGNAYEYIVAASGMTGFIAWVGIAVSHYRFRRAFNVQHHRKSELKYKAKWFPFGPIFAGILCVIVIVGQDVDFIKTGHFDLNRFIITYMGIPVFLVFFIYHKLRYKTKKIPLEEVDLSQDVSMNEVKHH persistent 497 lysP Gamma-aminobutyrate permease COG0833,E WP_002448996.1 UPI00019FCC7D UniRef100_A0A533IWL6,UniRef50_P25737,UniRef90_A0A2A1K6V8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 62479 62606 . + . GCA_005502385.1_00582_gene GCA_005502385.1_00582 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 62479 62606 . + . GCA_005502385.1_00582_mRNA GCA_005502385.1_00582 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 Infernal:001001 misc_RNA 62479 62606 79.3 + . GCA_005502385.1_00582 GCA_005502385.1_00582_gene,GCA_005502385.1_00582_mRNA GCA_005502385.1_00582 L20_leader GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 62585 63157 . + . GCA_005502385.1_00583_gene GCA_005502385.1_00583 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSALFAWENFVKFWEVSTIAKDQTQVNEKIRAKELRLIGQNGDQIGVKSKREALEMAERVELDLVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKVINVKEIRLSPTIEEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKFADECKDIATVEQKPKMEGRQMFIMLAPINEK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 62585 63157 . + . GCA_005502385.1_00583_mRNA GCA_005502385.1_00583 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSALFAWENFVKFWEVSTIAKDQTQVNEKIRAKELRLIGQNGDQIGVKSKREALEMAERVELDLVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKVINVKEIRLSPTIEEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKFADECKDIATVEQKPKMEGRQMFIMLAPINEK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 62585 63157 . + 0 GCA_005502385.1_00583 GCA_005502385.1_00583_gene,GCA_005502385.1_00583_mRNA GCA_005502385.1_00583 Translation initiation factor IF-3 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSALFAWENFVKFWEVSTIAKDQTQVNEKIRAKELRLIGQNGDQIGVKSKREALEMAERVELDLVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKVINVKEIRLSPTIEEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKFADECKDIATVEQKPKMEGRQMFIMLAPINEK persistent 190 infC translation initiation factor IF-3 GO:0003743,GO:0006413 UniRef50_B9DNC6,UniRef90_Q4L721 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 63185 63385 . + . GCA_005502385.1_00584_gene GCA_005502385.1_00584 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPKMKTHRGAAKRVKRTGSGQLKRSRAFTSHLFANKNTKQKRKLRKAKLVSKSDMKRVKQLLAYKK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 63185 63385 . + . GCA_005502385.1_00584_mRNA GCA_005502385.1_00584 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPKMKTHRGAAKRVKRTGSGQLKRSRAFTSHLFANKNTKQKRKLRKAKLVSKSDMKRVKQLLAYKK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 63185 63385 . + 0 GCA_005502385.1_00584 GCA_005502385.1_00584_gene,GCA_005502385.1_00584_mRNA GCA_005502385.1_00584 50S ribosomal protein L35 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPKMKTHRGAAKRVKRTGSGQLKRSRAFTSHLFANKNTKQKRKLRKAKLVSKSDMKRVKQLLAYKK persistent 66 rpmI 50S ribosomal protein L35 GO:0003735,GO:0005840,GO:0006412,GO:0022625 COG0291,J WP_002448990.1 UPI000054BA58 UniRef100_Q4L720,UniRef50_P55874,UniRef90_Q4L720 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 63439 63795 . + . GCA_005502385.1_00585_gene GCA_005502385.1_00585 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPRVKGGTVTRARRKKTIKLAKGYFGSKHTLYKVAKQQVMKSGQYAFRDRRQRKRDFRKLWITRINAAARQHDISYSRLMNGLKKADININRKMLSEIAISDDKAFGELVSKAKDALK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 63439 63795 . + . GCA_005502385.1_00585_mRNA GCA_005502385.1_00585 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPRVKGGTVTRARRKKTIKLAKGYFGSKHTLYKVAKQQVMKSGQYAFRDRRQRKRDFRKLWITRINAAARQHDISYSRLMNGLKKADININRKMLSEIAISDDKAFGELVSKAKDALK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 63439 63795 . + 0 GCA_005502385.1_00585 GCA_005502385.1_00585_gene,GCA_005502385.1_00585_mRNA GCA_005502385.1_00585 50S ribosomal protein L20 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPRVKGGTVTRARRKKTIKLAKGYFGSKHTLYKVAKQQVMKSGQYAFRDRRQRKRDFRKLWITRINAAARQHDISYSRLMNGLKKADININRKMLSEIAISDDKAFGELVSKAKDALK persistent 118 rplT 50S ribosomal protein L20 GO:0000027,GO:0000315,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625,GO:1990904 COG0292,J WP_002448983.1 UPI00019FCC7B UniRef100_A0A1L8Y509,UniRef50_P13070,UniRef90_Q49YB0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 63977 64588 . + . GCA_005502385.1_00586_gene GCA_005502385.1_00586 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKFDEQIIVVSRELLFDNEKNAFNGFLSKNDVQGEEIFNTFKNYEVKRRGDMEEDPSYKQLISYCLLENENDEILVYQRLSGGGEERLHGQSSVGVGGHMNNVVGADSINEVLRVNAQRELNEEVGLSEDRSQNMEYIGFINDDTNAVGKVHIGVVFKIKVKSSDVEVRETDTLKINWVSQDEINDLNHFESWSALILKDLK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 63977 64588 . + . GCA_005502385.1_00586_mRNA GCA_005502385.1_00586 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKFDEQIIVVSRELLFDNEKNAFNGFLSKNDVQGEEIFNTFKNYEVKRRGDMEEDPSYKQLISYCLLENENDEILVYQRLSGGGEERLHGQSSVGVGGHMNNVVGADSINEVLRVNAQRELNEEVGLSEDRSQNMEYIGFINDDTNAVGKVHIGVVFKIKVKSSDVEVRETDTLKINWVSQDEINDLNHFESWSALILKDLK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 63977 64588 . + 0 GCA_005502385.1_00586 GCA_005502385.1_00586_gene,GCA_005502385.1_00586_mRNA GCA_005502385.1_00586 hypothetical protein """""" GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKFDEQIIVVSRELLFDNEKNAFNGFLSKNDVQGEEIFNTFKNYEVKRRGDMEEDPSYKQLISYCLLENENDEILVYQRLSGGGEERLHGQSSVGVGGHMNNVVGADSINEVLRVNAQRELNEEVGLSEDRSQNMEYIGFINDDTNAVGKVHIGVVFKIKVKSSDVEVRETDTLKINWVSQDEINDLNHFESWSALILKDLK persistent 203 NUDIX domain-containing protein WP_017176142.1 UPI00031D2DE4 UniRef100_A0A4Q9WQS2,UniRef50_Q2FXQ3,UniRef90_A0A657M042 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 64601 65518 . + . GCA_005502385.1_00587_gene GCA_005502385.1_00587 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSDIIPFPQSKQKLYHNILNAQQQNKYKEMYQLFDIYEASFELDNQLSLIKCDMLNELGLYLELREEAIIFLKKGIPHYDELIIFYIKALIGLNQNYEAIEVINQIINEVKEHKTRMALFPLKEYAQSKLDEDKKLSSQLLSEFTSLDLNRQTKLMIKLIDNGHYEFRKTVAFLLSNQVESYNLKSLMLEYLRFSNYDSEIKIEKYGYEVNILPTTLKGLEHTDMKTTVIPKVLDRLENGALNIQNEAQYVMNNHSIKLYPLDIFSLFNEEDWIIAYDVYFKSMIGIEVSEANQELLTLIYQLDN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 64601 65518 . + . GCA_005502385.1_00587_mRNA GCA_005502385.1_00587 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSDIIPFPQSKQKLYHNILNAQQQNKYKEMYQLFDIYEASFELDNQLSLIKCDMLNELGLYLELREEAIIFLKKGIPHYDELIIFYIKALIGLNQNYEAIEVINQIINEVKEHKTRMALFPLKEYAQSKLDEDKKLSSQLLSEFTSLDLNRQTKLMIKLIDNGHYEFRKTVAFLLSNQVESYNLKSLMLEYLRFSNYDSEIKIEKYGYEVNILPTTLKGLEHTDMKTTVIPKVLDRLENGALNIQNEAQYVMNNHSIKLYPLDIFSLFNEEDWIIAYDVYFKSMIGIEVSEANQELLTLIYQLDN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 64601 65518 . + 0 GCA_005502385.1_00587 GCA_005502385.1_00587_gene,GCA_005502385.1_00587_mRNA GCA_005502385.1_00587 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSDIIPFPQSKQKLYHNILNAQQQNKYKEMYQLFDIYEASFELDNQLSLIKCDMLNELGLYLELREEAIIFLKKGIPHYDELIIFYIKALIGLNQNYEAIEVINQIINEVKEHKTRMALFPLKEYAQSKLDEDKKLSSQLLSEFTSLDLNRQTKLMIKLIDNGHYEFRKTVAFLLSNQVESYNLKSLMLEYLRFSNYDSEIKIEKYGYEVNILPTTLKGLEHTDMKTTVIPKVLDRLENGALNIQNEAQYVMNNHSIKLYPLDIFSLFNEEDWIIAYDVYFKSMIGIEVSEANQELLTLIYQLDN persistent 305 Tetratricopeptide repeat protein WP_017176143.1 UPI0003145317 UniRef100_A0A4Q9WR19,UniRef50_Q5HNM7,UniRef90_A0A657M181 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 65673 66989 . + . GCA_005502385.1_00588_gene GCA_005502385.1_00588 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTATWEKKEGNEGLLKVTVPAEKVNKALDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGVEALYQDAVDILLPEAYGEAIEETKINPVAQPEINVTQIEKGKDFEFEATVTVEPEVKLGDYKGLEIEKQDSELTDQDLQDEIDHSLGHLADMVVKENGAVEEGDTVNIDFDGYVDGEQFEGGQADGYDLEIGSGSFIPGFEDQLVGVKTGEEKDVVVTFPEEYHAEELAGKEATFKTKVNEIKYKEVPELTDEIANELDSDANSVDEYKENLRKRLSEQKAQDAENVEKEEAINKATENTTIDIPQAMIDTELDRMVQEFGQRIQQQGLDLQTYFQISGQDESQLREQMKDDAEQRVKTNLTLSAIADEENIEVTDEDIDKELEKMSSQFNISVEDIKQTLGNTDIIKNDVRIQKVIDLLRDNAKYVDSAKEDKKEDK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 65673 66989 . + . GCA_005502385.1_00588_mRNA GCA_005502385.1_00588 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTATWEKKEGNEGLLKVTVPAEKVNKALDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGVEALYQDAVDILLPEAYGEAIEETKINPVAQPEINVTQIEKGKDFEFEATVTVEPEVKLGDYKGLEIEKQDSELTDQDLQDEIDHSLGHLADMVVKENGAVEEGDTVNIDFDGYVDGEQFEGGQADGYDLEIGSGSFIPGFEDQLVGVKTGEEKDVVVTFPEEYHAEELAGKEATFKTKVNEIKYKEVPELTDEIANELDSDANSVDEYKENLRKRLSEQKAQDAENVEKEEAINKATENTTIDIPQAMIDTELDRMVQEFGQRIQQQGLDLQTYFQISGQDESQLREQMKDDAEQRVKTNLTLSAIADEENIEVTDEDIDKELEKMSSQFNISVEDIKQTLGNTDIIKNDVRIQKVIDLLRDNAKYVDSAKEDKKEDK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 65673 66989 . + 0 GCA_005502385.1_00588 GCA_005502385.1_00588_gene,GCA_005502385.1_00588_mRNA GCA_005502385.1_00588 Trigger factor GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTATWEKKEGNEGLLKVTVPAEKVNKALDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGVEALYQDAVDILLPEAYGEAIEETKINPVAQPEINVTQIEKGKDFEFEATVTVEPEVKLGDYKGLEIEKQDSELTDQDLQDEIDHSLGHLADMVVKENGAVEEGDTVNIDFDGYVDGEQFEGGQADGYDLEIGSGSFIPGFEDQLVGVKTGEEKDVVVTFPEEYHAEELAGKEATFKTKVNEIKYKEVPELTDEIANELDSDANSVDEYKENLRKRLSEQKAQDAENVEKEEAINKATENTTIDIPQAMIDTELDRMVQEFGQRIQQQGLDLQTYFQISGQDESQLREQMKDDAEQRVKTNLTLSAIADEENIEVTDEDIDKELEKMSSQFNISVEDIKQTLGNTDIIKNDVRIQKVIDLLRDNAKYVDSAKEDKKEDK persistent 438 tig trigger factor 5.2.1.8 GO:0003755,GO:0005737,GO:0005854,GO:0015031,GO:0043022,GO:0043335,GO:0044183,GO:0051082,GO:0051083,GO:0051301,GO:0061077,GO:0140839,GO:0140840 COG0544,O WP_049381992.1 UPI00066A1C7B UniRef100_UPI00066A1C7B,UniRef50_P80698,UniRef90_Q4L716 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 67146 68408 . + . GCA_005502385.1_00589_gene GCA_005502385.1_00589 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFKFNEDEENLKCSFCGKDQDQVKKLVAGSGVYICNECIELCSEIVEEELAQATSEEFTELPTPKEIMDHLNEYVIGQEKAKKSLAVAVYNHYKRIQQLGPNEDDVELQKSNIALIGPTGSGKTLLAQTLAKTLNVPFAIADATSLTEAGYVGDDVENILLRLIQAADFDIDKAEKGIIYVDEIDKIARKSENTSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPNQELIQIDTTNILFILGGAFDGIDEVIKRRLGEKVIGFASNEADKYDEEALLAQIRPEDLQAYGLIPEFIGRVPIVANLETLDVEALKNILTQPKNALVKQYTKMLALDNVELEFTEEALAAVSEKAIERKTGARGLRSIIEESLIDIMYDVPSTSDVAKVVVTAQTINEEIEPEMYDSEGNLLNGTKTSA . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 67146 68408 . + . GCA_005502385.1_00589_mRNA GCA_005502385.1_00589 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFKFNEDEENLKCSFCGKDQDQVKKLVAGSGVYICNECIELCSEIVEEELAQATSEEFTELPTPKEIMDHLNEYVIGQEKAKKSLAVAVYNHYKRIQQLGPNEDDVELQKSNIALIGPTGSGKTLLAQTLAKTLNVPFAIADATSLTEAGYVGDDVENILLRLIQAADFDIDKAEKGIIYVDEIDKIARKSENTSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPNQELIQIDTTNILFILGGAFDGIDEVIKRRLGEKVIGFASNEADKYDEEALLAQIRPEDLQAYGLIPEFIGRVPIVANLETLDVEALKNILTQPKNALVKQYTKMLALDNVELEFTEEALAAVSEKAIERKTGARGLRSIIEESLIDIMYDVPSTSDVAKVVVTAQTINEEIEPEMYDSEGNLLNGTKTSA . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 67146 68408 . + 0 GCA_005502385.1_00589 GCA_005502385.1_00589_gene,GCA_005502385.1_00589_mRNA GCA_005502385.1_00589 ATP-dependent Clp protease ATP-binding subunit ClpX GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFKFNEDEENLKCSFCGKDQDQVKKLVAGSGVYICNECIELCSEIVEEELAQATSEEFTELPTPKEIMDHLNEYVIGQEKAKKSLAVAVYNHYKRIQQLGPNEDDVELQKSNIALIGPTGSGKTLLAQTLAKTLNVPFAIADATSLTEAGYVGDDVENILLRLIQAADFDIDKAEKGIIYVDEIDKIARKSENTSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPNQELIQIDTTNILFILGGAFDGIDEVIKRRLGEKVIGFASNEADKYDEEALLAQIRPEDLQAYGLIPEFIGRVPIVANLETLDVEALKNILTQPKNALVKQYTKMLALDNVELEFTEEALAAVSEKAIERKTGARGLRSIIEESLIDIMYDVPSTSDVAKVVVTAQTINEEIEPEMYDSEGNLLNGTKTSA persistent 420 clpX ATP-dependent Clp protease ATP-binding subunit ClpX GO:0005524,GO:0008270,GO:0009376,GO:0016887,GO:0046983,GO:0051082,GO:0051301,GO:0051603,GO:0140662 COG1219,O WP_002448985.1 UPI00019FCC77 UniRef100_A0A8X8GH28,UniRef50_Q2FXQ7,UniRef90_Q2FXQ7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 68560 69150 . + . GCA_005502385.1_00590_gene GCA_005502385.1_00590 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNINPNNIELMISAVKEEQYPETNLTEIALSGRSNVGKSSFINSMIGRKNMARTSQQPGKTQTLNFYNIDEQLIFVDVPGYGYAKVSKSQREKFGKMIEEYLTKRENLGLVIQLVDLRHNPTEDDVLMYNYLKHFDLPTLVICTKEDKIAKGKVQKHIKNIKQKLDLDPNDTIISYSSIQNSKQQYIWDIIANYIN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 68560 69150 . + . GCA_005502385.1_00590_mRNA GCA_005502385.1_00590 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNINPNNIELMISAVKEEQYPETNLTEIALSGRSNVGKSSFINSMIGRKNMARTSQQPGKTQTLNFYNIDEQLIFVDVPGYGYAKVSKSQREKFGKMIEEYLTKRENLGLVIQLVDLRHNPTEDDVLMYNYLKHFDLPTLVICTKEDKIAKGKVQKHIKNIKQKLDLDPNDTIISYSSIQNSKQQYIWDIIANYIN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 68560 69150 . + 0 GCA_005502385.1_00590 GCA_005502385.1_00590_gene,GCA_005502385.1_00590_mRNA GCA_005502385.1_00590 putative GTP-binding protein EngB GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNINPNNIELMISAVKEEQYPETNLTEIALSGRSNVGKSSFINSMIGRKNMARTSQQPGKTQTLNFYNIDEQLIFVDVPGYGYAKVSKSQREKFGKMIEEYLTKRENLGLVIQLVDLRHNPTEDDVLMYNYLKHFDLPTLVICTKEDKIAKGKVQKHIKNIKQKLDLDPNDTIISYSSIQNSKQQYIWDIIANYIN persistent 196 yihA ribosome biogenesis GTP-binding protein YihA/YsxC GO:0003924,GO:0005525,GO:0005737,GO:0042254,GO:0043022 WP_002448982.1 UPI00019FCC76 UniRef100_A0A4Q9X133,UniRef50_Q2FXQ8,UniRef90_A0A974L1Q8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 69287 70624 . + . GCA_005502385.1_00591_gene GCA_005502385.1_00591 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MHFIAISINHRTADVALREQVAFRDDALRLANEDLFETKAILENVILSTCNRTEVYAVVDQIHTGRYYIQRFLARSFGFEVDDIKAMSEVKVGDEAVEHLLRVTSGLDSIVLGETQILGQMRDAFFLAQDLKTTGTIFNHLFKQSITFAKKAHNETDIADNAVSVSYAAVELSKKVLGKLKNKHAVIIGAGEMSELSLLNLLGSGINHITIVNRTESKARILAEKHQVSYDKLESLPSLLTSTDIVISSTSSPDYIITKSMINQALSYRKSKLLLLDIAVPRDIEPCHNLSDDVFNYDVDDLKGLVDANLKERQMAAEAISNEIPAEIKAHNDWVNMLGVVPVIRALREKAMTIQAETMDSIDRKLPNLSERERTVISKHTKSIINQMLKDPIKQAKELSNDKKSNEKLELFQNIFDIEAEDPYKAVKERKKEKELSVRHIFSFE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 69287 70624 . + . GCA_005502385.1_00591_mRNA GCA_005502385.1_00591 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MHFIAISINHRTADVALREQVAFRDDALRLANEDLFETKAILENVILSTCNRTEVYAVVDQIHTGRYYIQRFLARSFGFEVDDIKAMSEVKVGDEAVEHLLRVTSGLDSIVLGETQILGQMRDAFFLAQDLKTTGTIFNHLFKQSITFAKKAHNETDIADNAVSVSYAAVELSKKVLGKLKNKHAVIIGAGEMSELSLLNLLGSGINHITIVNRTESKARILAEKHQVSYDKLESLPSLLTSTDIVISSTSSPDYIITKSMINQALSYRKSKLLLLDIAVPRDIEPCHNLSDDVFNYDVDDLKGLVDANLKERQMAAEAISNEIPAEIKAHNDWVNMLGVVPVIRALREKAMTIQAETMDSIDRKLPNLSERERTVISKHTKSIINQMLKDPIKQAKELSNDKKSNEKLELFQNIFDIEAEDPYKAVKERKKEKELSVRHIFSFE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 69287 70624 . + 0 GCA_005502385.1_00591 GCA_005502385.1_00591_gene,GCA_005502385.1_00591_mRNA GCA_005502385.1_00591 Glutamyl-tRNA reductase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MHFIAISINHRTADVALREQVAFRDDALRLANEDLFETKAILENVILSTCNRTEVYAVVDQIHTGRYYIQRFLARSFGFEVDDIKAMSEVKVGDEAVEHLLRVTSGLDSIVLGETQILGQMRDAFFLAQDLKTTGTIFNHLFKQSITFAKKAHNETDIADNAVSVSYAAVELSKKVLGKLKNKHAVIIGAGEMSELSLLNLLGSGINHITIVNRTESKARILAEKHQVSYDKLESLPSLLTSTDIVISSTSSPDYIITKSMINQALSYRKSKLLLLDIAVPRDIEPCHNLSDDVFNYDVDDLKGLVDANLKERQMAAEAISNEIPAEIKAHNDWVNMLGVVPVIRALREKAMTIQAETMDSIDRKLPNLSERERTVISKHTKSIINQMLKDPIKQAKELSNDKKSNEKLELFQNIFDIEAEDPYKAVKERKKEKELSVRHIFSFE persistent 445 hemA glutamyl-tRNA reductase 1.2.1.70 GO:0008883,GO:0050661 UniRef50_Q65GJ9,UniRef90_A0A6N0I4A5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 70646 71458 . + . GCA_005502385.1_00592_gene GCA_005502385.1_00592 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQETLFIRFHEIILIVYLISILCYFIDFVRKSHKIRVLGIYALGIVWFLQTISLSMYITSHSDVLFNSIFDVFFFLSWMIISISLVLNIIKVLSFSVFFLNVIGFILLTMNTFRPEHYTNSIQKVQVINELLLVHVGLAVLSYAFFALAFVNALLYIIQYKNLKEKNFNQKYFRIGSVATLEKIIFFSTLGGLVILILSVILIAQWGIYAVGIAIFKDPKVMLSVIITLLYTVYIVMYLKKKIISINLIYFNIMIFCLCMVNLFFTTHFN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 70646 71458 . + . GCA_005502385.1_00592_mRNA GCA_005502385.1_00592 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQETLFIRFHEIILIVYLISILCYFIDFVRKSHKIRVLGIYALGIVWFLQTISLSMYITSHSDVLFNSIFDVFFFLSWMIISISLVLNIIKVLSFSVFFLNVIGFILLTMNTFRPEHYTNSIQKVQVINELLLVHVGLAVLSYAFFALAFVNALLYIIQYKNLKEKNFNQKYFRIGSVATLEKIIFFSTLGGLVILILSVILIAQWGIYAVGIAIFKDPKVMLSVIITLLYTVYIVMYLKKKIISINLIYFNIMIFCLCMVNLFFTTHFN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 70646 71458 . + 0 GCA_005502385.1_00592 GCA_005502385.1_00592_gene,GCA_005502385.1_00592_mRNA GCA_005502385.1_00592 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQETLFIRFHEIILIVYLISILCYFIDFVRKSHKIRVLGIYALGIVWFLQTISLSMYITSHSDVLFNSIFDVFFFLSWMIISISLVLNIIKVLSFSVFFLNVIGFILLTMNTFRPEHYTNSIQKVQVINELLLVHVGLAVLSYAFFALAFVNALLYIIQYKNLKEKNFNQKYFRIGSVATLEKIIFFSTLGGLVILILSVILIAQWGIYAVGIAIFKDPKVMLSVIITLLYTVYIVMYLKKKIISINLIYFNIMIFCLCMVNLFFTTHFN persistent 270 Cytochrome C assembly protein WP_002448932.1 UPI00019FCC74 UniRef100_A0A1L8Y4Z7,UniRef50_Q2FXR0,UniRef90_A0A974L1F0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 71487 72419 . + . GCA_005502385.1_00593_gene GCA_005502385.1_00593 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRKLVVGSRRSKLALTQSKQFIDKLKAIDPSLEIEIKEIVTKGDRIVNQQLSKVGGKGLFVKEIQNELFNNDIDMAIHSLKDVPSIIPEGLTLGCIPDREIPFDAYIAKNHVPLEELPKNSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWSDDVVTTYLDKDTLLPAIGQGALGIECRSNDIELLELLQKVHNNEVANCVTAERTFLAAMDGSCQVPIGGYANYNNNNEIEFTGLIMTPDGKERYEHTEVGTDPVKLGNRVSEILKEQGAYEIIRKLNEEASH . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 71487 72419 . + . GCA_005502385.1_00593_mRNA GCA_005502385.1_00593 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRKLVVGSRRSKLALTQSKQFIDKLKAIDPSLEIEIKEIVTKGDRIVNQQLSKVGGKGLFVKEIQNELFNNDIDMAIHSLKDVPSIIPEGLTLGCIPDREIPFDAYIAKNHVPLEELPKNSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWSDDVVTTYLDKDTLLPAIGQGALGIECRSNDIELLELLQKVHNNEVANCVTAERTFLAAMDGSCQVPIGGYANYNNNNEIEFTGLIMTPDGKERYEHTEVGTDPVKLGNRVSEILKEQGAYEIIRKLNEEASH . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 71487 72419 . + 0 GCA_005502385.1_00593 GCA_005502385.1_00593_gene,GCA_005502385.1_00593_mRNA GCA_005502385.1_00593 Porphobilinogen deaminase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRKLVVGSRRSKLALTQSKQFIDKLKAIDPSLEIEIKEIVTKGDRIVNQQLSKVGGKGLFVKEIQNELFNNDIDMAIHSLKDVPSIIPEGLTLGCIPDREIPFDAYIAKNHVPLEELPKNSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWSDDVVTTYLDKDTLLPAIGQGALGIECRSNDIELLELLQKVHNNEVANCVTAERTFLAAMDGSCQVPIGGYANYNNNNEIEFTGLIMTPDGKERYEHTEVGTDPVKLGNRVSEILKEQGAYEIIRKLNEEASH persistent 310 hemC hydroxymethylbilane synthase 2.5.1.61 GO:0004418,GO:0033014 WP_017176145.1 UPI00031C5C56 UniRef100_A0A4Q9WPR2,UniRef50_O34090,UniRef90_A0A974KYU3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 72451 73122 . + . GCA_005502385.1_00594_gene GCA_005502385.1_00594 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKPVIVMTQTSKVQSDMVEVIHKPFIKIQSLEFDTQLLHDNYDWLIFSSKNAVHLFYKYLEYVNVKHIAVVGAKTAQLCKQLGINIDFIPNDYSQEGLLEGLNLEKSSILIPSSAQARPKLQQTLAEHNNVVKIDLYTPIADRENIIEVINLIQHNQVEALTFSSSSAVRYYFSEAFPKHFKNYYAIGQQTANSIRAYGYEPYIADKQTSEALINTFLESRNK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 72451 73122 . + . GCA_005502385.1_00594_mRNA GCA_005502385.1_00594 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKPVIVMTQTSKVQSDMVEVIHKPFIKIQSLEFDTQLLHDNYDWLIFSSKNAVHLFYKYLEYVNVKHIAVVGAKTAQLCKQLGINIDFIPNDYSQEGLLEGLNLEKSSILIPSSAQARPKLQQTLAEHNNVVKIDLYTPIADRENIIEVINLIQHNQVEALTFSSSSAVRYYFSEAFPKHFKNYYAIGQQTANSIRAYGYEPYIADKQTSEALINTFLESRNK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 72451 73122 . + 0 GCA_005502385.1_00594 GCA_005502385.1_00594_gene,GCA_005502385.1_00594_mRNA GCA_005502385.1_00594 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKPVIVMTQTSKVQSDMVEVIHKPFIKIQSLEFDTQLLHDNYDWLIFSSKNAVHLFYKYLEYVNVKHIAVVGAKTAQLCKQLGINIDFIPNDYSQEGLLEGLNLEKSSILIPSSAQARPKLQQTLAEHNNVVKIDLYTPIADRENIIEVINLIQHNQVEALTFSSSSAVRYYFSEAFPKHFKNYYAIGQQTANSIRAYGYEPYIADKQTSEALINTFLESRNK persistent 223 Uroporphyrinogen-III synthase WP_002448958.1 UPI00019FCC72 UniRef100_A0A533IX15,UniRef50_Q5HNN4,UniRef90_A0A533IX15 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 73122 74096 . + . GCA_005502385.1_00595_gene GCA_005502385.1_00595 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKFDRHRRLRSSATMRSLVRENHVRKEDLIYPIFVVEKDNVRSEIKSLPGVYQISLNLLDDEINEAYDLGIRAIMFFGVPNEKDDVGSGAYDHNGIVQEATRRAKKLHKDLLIVADTCLCEYTDHGHCGIIDDHTHDVDNDKSLPLLVKTAISQVEAGADIIAPSNMMDGFVTEIRQGLDEAGYYNIPIMSYGIKYASSFFGPFRDAADSAPSFGDRKTYQMDPANRLEALRELESDLKEGADMMIVKPALSYLDIVRDVKNNTNIPVIAYNVSGEYAMTKAASQNGWIDEERVVMEQMVSMKRAGADMIITYFAKDICRYLDK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 73122 74096 . + . GCA_005502385.1_00595_mRNA GCA_005502385.1_00595 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKFDRHRRLRSSATMRSLVRENHVRKEDLIYPIFVVEKDNVRSEIKSLPGVYQISLNLLDDEINEAYDLGIRAIMFFGVPNEKDDVGSGAYDHNGIVQEATRRAKKLHKDLLIVADTCLCEYTDHGHCGIIDDHTHDVDNDKSLPLLVKTAISQVEAGADIIAPSNMMDGFVTEIRQGLDEAGYYNIPIMSYGIKYASSFFGPFRDAADSAPSFGDRKTYQMDPANRLEALRELESDLKEGADMMIVKPALSYLDIVRDVKNNTNIPVIAYNVSGEYAMTKAASQNGWIDEERVVMEQMVSMKRAGADMIITYFAKDICRYLDK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 73122 74096 . + 0 GCA_005502385.1_00595 GCA_005502385.1_00595_gene,GCA_005502385.1_00595_mRNA GCA_005502385.1_00595 Delta-aminolevulinic acid dehydratase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKFDRHRRLRSSATMRSLVRENHVRKEDLIYPIFVVEKDNVRSEIKSLPGVYQISLNLLDDEINEAYDLGIRAIMFFGVPNEKDDVGSGAYDHNGIVQEATRRAKKLHKDLLIVADTCLCEYTDHGHCGIIDDHTHDVDNDKSLPLLVKTAISQVEAGADIIAPSNMMDGFVTEIRQGLDEAGYYNIPIMSYGIKYASSFFGPFRDAADSAPSFGDRKTYQMDPANRLEALRELESDLKEGADMMIVKPALSYLDIVRDVKNNTNIPVIAYNVSGEYAMTKAASQNGWIDEERVVMEQMVSMKRAGADMIITYFAKDICRYLDK persistent 324 hemB porphobilinogen synthase 4.2.1.24 GO:0003824,GO:0004655,GO:0005829,GO:0006782,GO:0008270,GO:0033014,GO:0046872 COG0113,H WP_002448944.1 UPI00019FCC71 UniRef100_A0A1J6EX14,UniRef50_Q2FXR3,UniRef90_Q2FXR3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 74118 75401 . + . GCA_005502385.1_00596_gene GCA_005502385.1_00596 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTYEKSQEAMRIAETLMPGGVNSPVRAFKSVDTPAIFMDHGEGSKIYDIDGNEYIDYVLSWGPLILGHKNKQVISKLHDAVDKGTSFGASTLEENKLAELVIERVPSIEKVRMVSSGTEATLAALRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVATLGLPDSPGVPEGTAKNTITVPYNDLDAIKVAFENYGDDIAGVIVEPVAGNMGVVPPKKGFLEGLREVTKEYGSLLIFDEVMTGFRVGYNCAQGYFGVTPDITCLGKVIGGGLPVGAFGGKKEIMDKIAPVGNIYQAGTLSGNPLAMTSGYETLSQLTPESYEHFQKLGDILEKGLKEVFAKHNVPITVNRAGSMIGYFLNKGPITNFEEANQSDLELFSNMYREMAKEGIFLPPSQFEGTFLSTAHTKEDIEKTIHAFDNALSRIV . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 74118 75401 . + . GCA_005502385.1_00596_mRNA GCA_005502385.1_00596 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTYEKSQEAMRIAETLMPGGVNSPVRAFKSVDTPAIFMDHGEGSKIYDIDGNEYIDYVLSWGPLILGHKNKQVISKLHDAVDKGTSFGASTLEENKLAELVIERVPSIEKVRMVSSGTEATLAALRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVATLGLPDSPGVPEGTAKNTITVPYNDLDAIKVAFENYGDDIAGVIVEPVAGNMGVVPPKKGFLEGLREVTKEYGSLLIFDEVMTGFRVGYNCAQGYFGVTPDITCLGKVIGGGLPVGAFGGKKEIMDKIAPVGNIYQAGTLSGNPLAMTSGYETLSQLTPESYEHFQKLGDILEKGLKEVFAKHNVPITVNRAGSMIGYFLNKGPITNFEEANQSDLELFSNMYREMAKEGIFLPPSQFEGTFLSTAHTKEDIEKTIHAFDNALSRIV . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 74118 75401 . + 0 GCA_005502385.1_00596 GCA_005502385.1_00596_gene,GCA_005502385.1_00596_mRNA GCA_005502385.1_00596 Glutamate-1-semialdehyde 2%2C1-aminomutase 1 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTYEKSQEAMRIAETLMPGGVNSPVRAFKSVDTPAIFMDHGEGSKIYDIDGNEYIDYVLSWGPLILGHKNKQVISKLHDAVDKGTSFGASTLEENKLAELVIERVPSIEKVRMVSSGTEATLAALRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVATLGLPDSPGVPEGTAKNTITVPYNDLDAIKVAFENYGDDIAGVIVEPVAGNMGVVPPKKGFLEGLREVTKEYGSLLIFDEVMTGFRVGYNCAQGYFGVTPDITCLGKVIGGGLPVGAFGGKKEIMDKIAPVGNIYQAGTLSGNPLAMTSGYETLSQLTPESYEHFQKLGDILEKGLKEVFAKHNVPITVNRAGSMIGYFLNKGPITNFEEANQSDLELFSNMYREMAKEGIFLPPSQFEGTFLSTAHTKEDIEKTIHAFDNALSRIV persistent 427 hemL glutamate-1-semialdehyde 2,1-aminomutase 5.4.3.8 GO:0033014,GO:0042286 UniRef50_P30949,UniRef90_UPI00066D9CB0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 75556 76575 . + . GCA_005502385.1_00597_gene GCA_005502385.1_00597 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSLILKLSHMLLPFMFGPIIASIIVVKVLKLNIKWPFWISQIGLILLGVQIGSTFTSQVINDIKNEWLTIVTVTVLLITLSLLIAYFFKKIARVNTETAILSVIPGALSQMLIMAEEDKKANILVVSLTQTSRVIFVVVLVPLISFLFSNSSSSEEMIHKATPLTRALNVPQIALIMIAIAFVYFLMSKINFPTKQLLAPIVVLIVWNLSTHLTFTLDNYILAFAQVIYMIRIGLQIAHLLGDLKGRIAIAIMYQNISLILGSFLMVFIVHLFTHNSLNELFLGGAPGGMSQIVLVAIATGADVAKISSFHIFRIFFILFLVAPIINYFLKRKKSDNQS . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 75556 76575 . + . GCA_005502385.1_00597_mRNA GCA_005502385.1_00597 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSLILKLSHMLLPFMFGPIIASIIVVKVLKLNIKWPFWISQIGLILLGVQIGSTFTSQVINDIKNEWLTIVTVTVLLITLSLLIAYFFKKIARVNTETAILSVIPGALSQMLIMAEEDKKANILVVSLTQTSRVIFVVVLVPLISFLFSNSSSSEEMIHKATPLTRALNVPQIALIMIAIAFVYFLMSKINFPTKQLLAPIVVLIVWNLSTHLTFTLDNYILAFAQVIYMIRIGLQIAHLLGDLKGRIAIAIMYQNISLILGSFLMVFIVHLFTHNSLNELFLGGAPGGMSQIVLVAIATGADVAKISSFHIFRIFFILFLVAPIINYFLKRKKSDNQS . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 75556 76575 . + 0 GCA_005502385.1_00597 GCA_005502385.1_00597_gene,GCA_005502385.1_00597_mRNA GCA_005502385.1_00597 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSLILKLSHMLLPFMFGPIIASIIVVKVLKLNIKWPFWISQIGLILLGVQIGSTFTSQVINDIKNEWLTIVTVTVLLITLSLLIAYFFKKIARVNTETAILSVIPGALSQMLIMAEEDKKANILVVSLTQTSRVIFVVVLVPLISFLFSNSSSSEEMIHKATPLTRALNVPQIALIMIAIAFVYFLMSKINFPTKQLLAPIVVLIVWNLSTHLTFTLDNYILAFAQVIYMIRIGLQIAHLLGDLKGRIAIAIMYQNISLILGSFLMVFIVHLFTHNSLNELFLGGAPGGMSQIVLVAIATGADVAKISSFHIFRIFFILFLVAPIINYFLKRKKSDNQS persistent 339 abrB AbrB family transcriptional regulator UniRef50_Q2FXR6,UniRef90_A0A3S7GXR4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 76624 77181 . - . GCA_005502385.1_00598_gene GCA_005502385.1_00598 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNACAFGTTDPIYLDYHNKVWGQPDFNSLSLFKLLALESQHAGLSWLTILKKKEAYEKAFHQFDPIKISKMTEKDINALMTFPNIVHNRKKLEAIVSQAKGYLQIEKEYGSFSKFLWSYVDGHPIDLHYKTPSERITVDERAKQLSKDLKAYGFKFLGPVTVFSFMEAAGLYDAHLEGCPSKPNH . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 76624 77181 . - . GCA_005502385.1_00598_mRNA GCA_005502385.1_00598 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNACAFGTTDPIYLDYHNKVWGQPDFNSLSLFKLLALESQHAGLSWLTILKKKEAYEKAFHQFDPIKISKMTEKDINALMTFPNIVHNRKKLEAIVSQAKGYLQIEKEYGSFSKFLWSYVDGHPIDLHYKTPSERITVDERAKQLSKDLKAYGFKFLGPVTVFSFMEAAGLYDAHLEGCPSKPNH . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 76624 77181 . - 0 GCA_005502385.1_00598 GCA_005502385.1_00598_gene,GCA_005502385.1_00598_mRNA GCA_005502385.1_00598 DNA-3-methyladenine glycosylase 1 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNACAFGTTDPIYLDYHNKVWGQPDFNSLSLFKLLALESQHAGLSWLTILKKKEAYEKAFHQFDPIKISKMTEKDINALMTFPNIVHNRKKLEAIVSQAKGYLQIEKEYGSFSKFLWSYVDGHPIDLHYKTPSERITVDERAKQLSKDLKAYGFKFLGPVTVFSFMEAAGLYDAHLEGCPSKPNH persistent 185 DNA-3-methyladenine glycosylase I 3.2.2.20 WP_002448956.1 UPI00019FCC6E UniRef100_A0A1J6E1Z5,UniRef50_Q2FXR7,UniRef90_A0A1J6E1Z5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 77240 77466 . + . GCA_005502385.1_00599_gene GCA_005502385.1_00599 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 77240 77466 . + . GCA_005502385.1_00599_mRNA GCA_005502385.1_00599 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 Infernal:001001 misc_RNA 77240 77466 135.6 + . GCA_005502385.1_00599 GCA_005502385.1_00599_gene,GCA_005502385.1_00599_mRNA GCA_005502385.1_00599 T-box GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 77506 80136 . + . GCA_005502385.1_00600_gene GCA_005502385.1_00600 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKMESKYNPREVEAGRYEEWVKNEYFKPLEDESREAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAKVDAKLKEQGISRHDIGREKFLEHAWSWKEEYASFIRKQWAKLGLGLDYSRERFTLDDGLSKAVRKVFVDLYNKGIIYRGERIINWDPVARTALSDIEVIHEDVQGYFYHFKYPYADGNGYIEIATTRPETMLGDTAIVVNPNDERYKDVIGKKVILPIIGRELPILADEYVDIEFGSGAMKVTPAHDPNDFEIGQRHHLENIIVMDENGKMNDNASQYAGLDRFECRKKLVEDLKAQDLVIKIEEHMHSVGHSERSGAVVEPYLSTQWFVKMKPLAQQALDNQKTDNRIDFYPPRFENTFNRWMEEIRDWTISRQLWWGHQIPAWYHNETGEVYVGEEAPADIENWTQDEDVLDTWFSSALWPFSTLGWPNEEAKDYQRYYPTNVLVTGYDIIFFWVARMIFQGLEFTGKRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIEKYGADSLRYFLATGSSPGNDLRYSTEKVESVWNFINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIETVTNLSEKYEFGEVGRALYNFIWDEFCDWYIEMSKIPMNGEDEAQKQTTRSVLSYTLDQIMRMLHPFMPFVTEKIWQSLPHEGETIVKAAWPTVKEEFVFDESKQTMEQLVEIIKSVRQSRVEVNTPLSKSIPILIQAKNEEIKTILEKNADYIHRFCNPSELTIDTNVDIPEKAMTAVVVAGKVILPLEGLIDMDKEIERLEKELDKLQKELDRVDKKLSNENFVNKAPEKIINEEREKQQKYQEKYNGVKNRIEQLKA . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 77506 80136 . + . GCA_005502385.1_00600_mRNA GCA_005502385.1_00600 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKMESKYNPREVEAGRYEEWVKNEYFKPLEDESREAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAKVDAKLKEQGISRHDIGREKFLEHAWSWKEEYASFIRKQWAKLGLGLDYSRERFTLDDGLSKAVRKVFVDLYNKGIIYRGERIINWDPVARTALSDIEVIHEDVQGYFYHFKYPYADGNGYIEIATTRPETMLGDTAIVVNPNDERYKDVIGKKVILPIIGRELPILADEYVDIEFGSGAMKVTPAHDPNDFEIGQRHHLENIIVMDENGKMNDNASQYAGLDRFECRKKLVEDLKAQDLVIKIEEHMHSVGHSERSGAVVEPYLSTQWFVKMKPLAQQALDNQKTDNRIDFYPPRFENTFNRWMEEIRDWTISRQLWWGHQIPAWYHNETGEVYVGEEAPADIENWTQDEDVLDTWFSSALWPFSTLGWPNEEAKDYQRYYPTNVLVTGYDIIFFWVARMIFQGLEFTGKRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIEKYGADSLRYFLATGSSPGNDLRYSTEKVESVWNFINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIETVTNLSEKYEFGEVGRALYNFIWDEFCDWYIEMSKIPMNGEDEAQKQTTRSVLSYTLDQIMRMLHPFMPFVTEKIWQSLPHEGETIVKAAWPTVKEEFVFDESKQTMEQLVEIIKSVRQSRVEVNTPLSKSIPILIQAKNEEIKTILEKNADYIHRFCNPSELTIDTNVDIPEKAMTAVVVAGKVILPLEGLIDMDKEIERLEKELDKLQKELDRVDKKLSNENFVNKAPEKIINEEREKQQKYQEKYNGVKNRIEQLKA . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 77506 80136 . + 0 GCA_005502385.1_00600 GCA_005502385.1_00600_gene,GCA_005502385.1_00600_mRNA GCA_005502385.1_00600 Valine--tRNA ligase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKMESKYNPREVEAGRYEEWVKNEYFKPLEDESREAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAKVDAKLKEQGISRHDIGREKFLEHAWSWKEEYASFIRKQWAKLGLGLDYSRERFTLDDGLSKAVRKVFVDLYNKGIIYRGERIINWDPVARTALSDIEVIHEDVQGYFYHFKYPYADGNGYIEIATTRPETMLGDTAIVVNPNDERYKDVIGKKVILPIIGRELPILADEYVDIEFGSGAMKVTPAHDPNDFEIGQRHHLENIIVMDENGKMNDNASQYAGLDRFECRKKLVEDLKAQDLVIKIEEHMHSVGHSERSGAVVEPYLSTQWFVKMKPLAQQALDNQKTDNRIDFYPPRFENTFNRWMEEIRDWTISRQLWWGHQIPAWYHNETGEVYVGEEAPADIENWTQDEDVLDTWFSSALWPFSTLGWPNEEAKDYQRYYPTNVLVTGYDIIFFWVARMIFQGLEFTGKRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIEKYGADSLRYFLATGSSPGNDLRYSTEKVESVWNFINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIETVTNLSEKYEFGEVGRALYNFIWDEFCDWYIEMSKIPMNGEDEAQKQTTRSVLSYTLDQIMRMLHPFMPFVTEKIWQSLPHEGETIVKAAWPTVKEEFVFDESKQTMEQLVEIIKSVRQSRVEVNTPLSKSIPILIQAKNEEIKTILEKNADYIHRFCNPSELTIDTNVDIPEKAMTAVVVAGKVILPLEGLIDMDKEIERLEKELDKLQKELDRVDKKLSNENFVNKAPEKIINEEREKQQKYQEKYNGVKNRIEQLKA persistent 876 valine--tRNA ligase 6.1.1.9 GO:0000166,GO:0004812,GO:0004832,GO:0005524,GO:0006438 UniRef50_P11931,UniRef90_A0A2K0A7G6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 80148 81416 . + . GCA_005502385.1_00601_gene GCA_005502385.1_00601 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNYLDSLYWIHERTKFGIKPGVKRMEWMLNHLNNPQLNIRGIHVGGTNGKGSTVAYLRAALVENGYEVGTFTSPFIETFNERISLNGYPISNDEIVELVKRVKPVSEALEQETELGSATEFEIITTMMFLYFGEIHPVDFVIVEAGLGIKNDSTNVFTPILSILTSIGLDHTDILGSTYLDIAKDKGAIIKPNVPVIYAVKNEEALKYIRDLAENQNAKPIELDREIIIVSEDDEFTYRYKDYELETIILDMIGDHQKENASLAITALIELNEENIIELDFNKMIDAIESVCWTGRIEQVKEKPLIIIDGAHNNESVEALVSTIKNYYDLEKMDVLFSAIKGKPVNEMLSKLQNLAGTFYFTEFDFHKALSKQELLESIDADNIEYIDDYVDFINHYDGEGLLITGSLYFISEVKSKVEFNS . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 80148 81416 . + . GCA_005502385.1_00601_mRNA GCA_005502385.1_00601 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNYLDSLYWIHERTKFGIKPGVKRMEWMLNHLNNPQLNIRGIHVGGTNGKGSTVAYLRAALVENGYEVGTFTSPFIETFNERISLNGYPISNDEIVELVKRVKPVSEALEQETELGSATEFEIITTMMFLYFGEIHPVDFVIVEAGLGIKNDSTNVFTPILSILTSIGLDHTDILGSTYLDIAKDKGAIIKPNVPVIYAVKNEEALKYIRDLAENQNAKPIELDREIIIVSEDDEFTYRYKDYELETIILDMIGDHQKENASLAITALIELNEENIIELDFNKMIDAIESVCWTGRIEQVKEKPLIIIDGAHNNESVEALVSTIKNYYDLEKMDVLFSAIKGKPVNEMLSKLQNLAGTFYFTEFDFHKALSKQELLESIDADNIEYIDDYVDFINHYDGEGLLITGSLYFISEVKSKVEFNS . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 80148 81416 . + 0 GCA_005502385.1_00601 GCA_005502385.1_00601_gene,GCA_005502385.1_00601_mRNA GCA_005502385.1_00601 Folylpolyglutamate synthase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNYLDSLYWIHERTKFGIKPGVKRMEWMLNHLNNPQLNIRGIHVGGTNGKGSTVAYLRAALVENGYEVGTFTSPFIETFNERISLNGYPISNDEIVELVKRVKPVSEALEQETELGSATEFEIITTMMFLYFGEIHPVDFVIVEAGLGIKNDSTNVFTPILSILTSIGLDHTDILGSTYLDIAKDKGAIIKPNVPVIYAVKNEEALKYIRDLAENQNAKPIELDREIIIVSEDDEFTYRYKDYELETIILDMIGDHQKENASLAITALIELNEENIIELDFNKMIDAIESVCWTGRIEQVKEKPLIIIDGAHNNESVEALVSTIKNYYDLEKMDVLFSAIKGKPVNEMLSKLQNLAGTFYFTEFDFHKALSKQELLESIDADNIEYIDDYVDFINHYDGEGLLITGSLYFISEVKSKVEFNS persistent 422 tetrahydrofolate synthase WP_017176149.1 UPI0002D9D142 UniRef100_A0A1K1UEU5,UniRef50_Q2FXR9,UniRef90_A0A974QP53 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 82379 83056 . + . GCA_005502385.1_00602_gene GCA_005502385.1_00602 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIKDMAKSELPKERLIQYGEKSLSNSELLAILINTGRQGVSSIDIANEMINKVNNLKELKLLSIHDLLKIKGIGLHKAVTLKAAFELGERINKRNSIEKVKIKSPKDVADMMMSKMKDLTQEHLVALFLNTKNIVIKEETIFIGTLNSSVIHPREVFNAAIRASCNAVIVIHNHPSGDVTPSKEDIATTIRLKECGQILGIELLDHIIIGDQKFTSLVEEGYFV . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 82379 83056 . + . GCA_005502385.1_00602_mRNA GCA_005502385.1_00602 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIKDMAKSELPKERLIQYGEKSLSNSELLAILINTGRQGVSSIDIANEMINKVNNLKELKLLSIHDLLKIKGIGLHKAVTLKAAFELGERINKRNSIEKVKIKSPKDVADMMMSKMKDLTQEHLVALFLNTKNIVIKEETIFIGTLNSSVIHPREVFNAAIRASCNAVIVIHNHPSGDVTPSKEDIATTIRLKECGQILGIELLDHIIIGDQKFTSLVEEGYFV . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 82379 83056 . + 0 GCA_005502385.1_00602 GCA_005502385.1_00602_gene,GCA_005502385.1_00602_mRNA GCA_005502385.1_00602 hypothetical protein UPF0758 protein YsxA GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIKDMAKSELPKERLIQYGEKSLSNSELLAILINTGRQGVSSIDIANEMINKVNNLKELKLLSIHDLLKIKGIGLHKAVTLKAAFELGERINKRNSIEKVKIKSPKDVADMMMSKMKDLTQEHLVALFLNTKNIVIKEETIFIGTLNSSVIHPREVFNAAIRASCNAVIVIHNHPSGDVTPSKEDIATTIRLKECGQILGIELLDHIIIGDQKFTSLVEEGYFV persistent 225 radC DNA repair protein RadC GO:0003677,GO:0006281 WP_017176150.1 UPI0002F49CD7 UniRef100_A0A4Q9WPT1,UniRef50_Q02170,UniRef90_A0AAE5JNP4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 83134 83415 . + . GCA_005502385.1_00603_gene GCA_005502385.1_00603 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTLILIIGVLIPIIYIMRLNIKQKTIRLKETLNTVLLSIVGITIFSFIGVFVNHTHTQLYILLISDIVTGTIFGLLLATIYKIYEYLSQSNRK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 83134 83415 . + . GCA_005502385.1_00603_mRNA GCA_005502385.1_00603 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTLILIIGVLIPIIYIMRLNIKQKTIRLKETLNTVLLSIVGITIFSFIGVFVNHTHTQLYILLISDIVTGTIFGLLLATIYKIYEYLSQSNRK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 83134 83415 . + 0 GCA_005502385.1_00603 GCA_005502385.1_00603_gene,GCA_005502385.1_00603_mRNA GCA_005502385.1_00603 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTLILIIGVLIPIIYIMRLNIKQKTIRLKETLNTVLLSIVGITIFSFIGVFVNHTHTQLYILLISDIVTGTIFGLLLATIYKIYEYLSQSNRK persistent 93 yajC Preprotein translocase subunit YajC WP_017176151.1 UPI0002DEE9FA UniRef100_A0A4Q9WPS0,UniRef50_A0A4Q9WPS0,UniRef90_A0A4Q9WPS0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 83506 83685 . - . GCA_005502385.1_00604_gene GCA_005502385.1_00604 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNILTIILLILLAVILFKVGFALLRFLISAAFIILGLYLAYQGVLWILENFNVLSAYIR . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 83506 83685 . - . GCA_005502385.1_00604_mRNA GCA_005502385.1_00604 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNILTIILLILLAVILFKVGFALLRFLISAAFIILGLYLAYQGVLWILENFNVLSAYIR . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 83506 83685 . - 0 GCA_005502385.1_00604 GCA_005502385.1_00604_gene,GCA_005502385.1_00604_mRNA GCA_005502385.1_00604 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNILTIILLILLAVILFKVGFALLRFLISAAFIILGLYLAYQGVLWILENFNVLSAYIR persistent 59 cvpA CvpA family protein WP_002455241.1 UPI0001EF5282 UniRef100_A0A1L8Y508,UniRef50_A0A1L8Y508,UniRef90_A0A1L8Y508 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 83853 84323 . + . GCA_005502385.1_00605_gene GCA_005502385.1_00605 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRMVFSIFKNIVAVIAILSIVYFALKYAPFLREQDWNPMNQPPNNQFELLPSNQASTPVPTNGKSYTIEENHLLQNIPASQTKNVFKFIDKKEFMEVSGIVRMGYNDNYIVGQRDNEFIIYKFGSDTIKVFSTEIEMEQELNRLGQSITLKPQNEY . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 83853 84323 . + . GCA_005502385.1_00605_mRNA GCA_005502385.1_00605 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRMVFSIFKNIVAVIAILSIVYFALKYAPFLREQDWNPMNQPPNNQFELLPSNQASTPVPTNGKSYTIEENHLLQNIPASQTKNVFKFIDKKEFMEVSGIVRMGYNDNYIVGQRDNEFIIYKFGSDTIKVFSTEIEMEQELNRLGQSITLKPQNEY . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 83853 84323 . + 0 GCA_005502385.1_00605 GCA_005502385.1_00605_gene,GCA_005502385.1_00605_mRNA GCA_005502385.1_00605 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRMVFSIFKNIVAVIAILSIVYFALKYAPFLREQDWNPMNQPPNNQFELLPSNQASTPVPTNGKSYTIEENHLLQNIPASQTKNVFKFIDKKEFMEVSGIVRMGYNDNYIVGQRDNEFIIYKFGSDTIKVFSTEIEMEQELNRLGQSITLKPQNEY persistent 156 DUF4930 domain-containing protein WP_019835432.1 UPI0003722B56 UniRef100_UPI0003722B56,UniRef50_A0A1J3ZXU8,UniRef90_A0A6N0I4H9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 84404 84532 . + . GCA_005502385.1_00606_gene GCA_005502385.1_00606 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSEQSKEKQANEQAKAQNLFSKWRKDETLYEEDKKDKPNKES . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 84404 84532 . + . GCA_005502385.1_00606_mRNA GCA_005502385.1_00606 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSEQSKEKQANEQAKAQNLFSKWRKDETLYEEDKKDKPNKES . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 84404 84532 . + 0 GCA_005502385.1_00606 GCA_005502385.1_00606_gene,GCA_005502385.1_00606_mRNA GCA_005502385.1_00606 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSEQSKEKQANEQAKAQNLFSKWRKDETLYEEDKKDKPNKES persistent 42 hypothetical protein WP_017176153.1 UPI0002E020EA UniRef100_A0A4Q9X0Z2,UniRef50_A0A4Q9X0Z2,UniRef90_A0A4Q9X0Z2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 84701 85534 . + . GCA_005502385.1_00607_gene GCA_005502385.1_00607 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLNFFKNNKLIVVFCAIIIFIALIGLSIRSQTQSPPEQYVGDSVSFGQRVISYPVNFVTGAIGNFFQSNKSNHNEVNQLKAKNEALEAENKNLKKELDMTDASKYDAISGAIIARNPDQWMNTVIIDKGKKAGVSNNMAVFTSDGLIGRVTRVNQFSSQVDLLSTNTRAGKLSVNIQHHSKNVFGLIDHYDNKTQELIISNINNKDKISKGDKVVTSGLADQLPSDLYIGEVTKVENDEYGLAKEVRVKTGANLSDIQHVYIAKKSNNTDFNERETR . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 84701 85534 . + . GCA_005502385.1_00607_mRNA GCA_005502385.1_00607 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLNFFKNNKLIVVFCAIIIFIALIGLSIRSQTQSPPEQYVGDSVSFGQRVISYPVNFVTGAIGNFFQSNKSNHNEVNQLKAKNEALEAENKNLKKELDMTDASKYDAISGAIIARNPDQWMNTVIIDKGKKAGVSNNMAVFTSDGLIGRVTRVNQFSSQVDLLSTNTRAGKLSVNIQHHSKNVFGLIDHYDNKTQELIISNINNKDKISKGDKVVTSGLADQLPSDLYIGEVTKVENDEYGLAKEVRVKTGANLSDIQHVYIAKKSNNTDFNERETR . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 84701 85534 . + 0 GCA_005502385.1_00607 GCA_005502385.1_00607_gene,GCA_005502385.1_00607_mRNA GCA_005502385.1_00607 Cell shape-determining protein MreC GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLNFFKNNKLIVVFCAIIIFIALIGLSIRSQTQSPPEQYVGDSVSFGQRVISYPVNFVTGAIGNFFQSNKSNHNEVNQLKAKNEALEAENKNLKKELDMTDASKYDAISGAIIARNPDQWMNTVIIDKGKKAGVSNNMAVFTSDGLIGRVTRVNQFSSQVDLLSTNTRAGKLSVNIQHHSKNVFGLIDHYDNKTQELIISNINNKDKISKGDKVVTSGLADQLPSDLYIGEVTKVENDEYGLAKEVRVKTGANLSDIQHVYIAKKSNNTDFNERETR persistent 277 mreC rod shape-determining protein MreC GO:0008360 WP_017176154.1 UPI00030C39E1 UniRef100_A0A4Q9X0Z1,UniRef50_A0A7Z7YX61,UniRef90_A0A974L1C4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 85534 86034 . + . GCA_005502385.1_00608_gene GCA_005502385.1_00608 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKAFVYIMIGIIVFYLDTLIGLVIPFHIGNLTFILVPHLTLMYLLLLSIYRPFMVTLLLSIFLGMITDIYFGSVYGLYLFGYIFLITIFNKFLKIFYRDYIMVYWFSIIGVMILEIFVAIIYSVISYVEFDLLNFILLRIIPTLILNIILLIILMPIFFKFFKKPI . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 85534 86034 . + . GCA_005502385.1_00608_mRNA GCA_005502385.1_00608 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKAFVYIMIGIIVFYLDTLIGLVIPFHIGNLTFILVPHLTLMYLLLLSIYRPFMVTLLLSIFLGMITDIYFGSVYGLYLFGYIFLITIFNKFLKIFYRDYIMVYWFSIIGVMILEIFVAIIYSVISYVEFDLLNFILLRIIPTLILNIILLIILMPIFFKFFKKPI . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 85534 86034 . + 0 GCA_005502385.1_00608 GCA_005502385.1_00608_gene,GCA_005502385.1_00608_mRNA GCA_005502385.1_00608 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKAFVYIMIGIIVFYLDTLIGLVIPFHIGNLTFILVPHLTLMYLLLLSIYRPFMVTLLLSIFLGMITDIYFGSVYGLYLFGYIFLITIFNKFLKIFYRDYIMVYWFSIIGVMILEIFVAIIYSVISYVEFDLLNFILLRIIPTLILNIILLIILMPIFFKFFKKPI persistent 166 mreD rod shape-determining protein MreD GO:0008360,GO:0016020 WP_017176155.1 UPI0002FB3307 UniRef100_A0A4Q9WPT4,UniRef50_A0A2A1KA19,UniRef90_A0A4Q9WPT4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 86089 86172 . + . GCA_005502385.1_00609_gene GCA_005502385.1_00609 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 86089 86172 . + . GCA_005502385.1_00609_mRNA GCA_005502385.1_00609 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 Infernal:001001 misc_RNA 86089 86172 57.6 + . GCA_005502385.1_00609 GCA_005502385.1_00609_gene,GCA_005502385.1_00609_mRNA GCA_005502385.1_00609 L21_leader GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 86186 86494 . + . GCA_005502385.1_00610_gene GCA_005502385.1_00610 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFAIIETGGKQIKVEEGQEIFVEKLDVNEGDSFTFDKVLFVGGDSVKVGAPTVEGATVTATVNKQGRGKKITVFTYKRRKDSKRKKGHRQPYTKLTIDKINA . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 86186 86494 . + . GCA_005502385.1_00610_mRNA GCA_005502385.1_00610 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFAIIETGGKQIKVEEGQEIFVEKLDVNEGDSFTFDKVLFVGGDSVKVGAPTVEGATVTATVNKQGRGKKITVFTYKRRKDSKRKKGHRQPYTKLTIDKINA . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 86186 86494 . + 0 GCA_005502385.1_00610 GCA_005502385.1_00610_gene,GCA_005502385.1_00610_mRNA GCA_005502385.1_00610 50S ribosomal protein L21 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFAIIETGGKQIKVEEGQEIFVEKLDVNEGDSFTFDKVLFVGGDSVKVGAPTVEGATVTATVNKQGRGKKITVFTYKRRKDSKRKKGHRQPYTKLTIDKINA persistent 102 rplU 50S ribosomal protein L21 GO:0003723,GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0019843,GO:1990904 COG0261,J WP_002448968.1 UPI00019FCC62 UniRef100_A0A380FYS6,UniRef50_Q2FXS8,UniRef90_Q2FXS8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 86497 86817 . + . GCA_005502385.1_00611_gene GCA_005502385.1_00611 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MITVDISINDEGKVTDVIMDGHANHGDYGYDIVCAGASAVLFGSVNAILSLTSENPDIDYDDDGGHFHIRSVDTNNEQAQLILQAMLVSLQTIEDEYNENIRLNYK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 86497 86817 . + . GCA_005502385.1_00611_mRNA GCA_005502385.1_00611 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MITVDISINDEGKVTDVIMDGHANHGDYGYDIVCAGASAVLFGSVNAILSLTSENPDIDYDDDGGHFHIRSVDTNNEQAQLILQAMLVSLQTIEDEYNENIRLNYK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 86497 86817 . + 0 GCA_005502385.1_00611 GCA_005502385.1_00611_gene,GCA_005502385.1_00611_mRNA GCA_005502385.1_00611 hypothetical protein """""" GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MITVDISINDEGKVTDVIMDGHANHGDYGYDIVCAGASAVLFGSVNAILSLTSENPDIDYDDDGGHFHIRSVDTNNEQAQLILQAMLVSLQTIEDEYNENIRLNYK persistent 106 ysxB Ribosomal processing cysteine protease Prp COG2868,S WP_017176156.1 UPI000303E29B UniRef100_A0A4Q9WQM8,UniRef50_P26942,UniRef90_A0A380FZ65 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 86829 87113 . + . GCA_005502385.1_00612_gene GCA_005502385.1_00612 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLKLNLQFFASKKGVSSTKNGRDSESKRLGAKRADGQFVTGGSILYRQRGTKIYAGENVGRGGDDTLFAKIDGVVRFERKGRDKKQVSVYAVAE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 86829 87113 . + . GCA_005502385.1_00612_mRNA GCA_005502385.1_00612 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLKLNLQFFASKKGVSSTKNGRDSESKRLGAKRADGQFVTGGSILYRQRGTKIYAGENVGRGGDDTLFAKIDGVVRFERKGRDKKQVSVYAVAE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 86829 87113 . + 0 GCA_005502385.1_00612 GCA_005502385.1_00612_gene,GCA_005502385.1_00612_mRNA GCA_005502385.1_00612 50S ribosomal protein L27 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLKLNLQFFASKKGVSSTKNGRDSESKRLGAKRADGQFVTGGSILYRQRGTKIYAGENVGRGGDDTLFAKIDGVVRFERKGRDKKQVSVYAVAE persistent 94 rpmA 50S ribosomal protein L27 GO:0000315,GO:0003735,GO:0006412,GO:0022625 COG0211,J WP_002449010.1 UPI00019FCC60 UniRef100_A0A1L8Y514,UniRef50_Q2FXT0,UniRef90_Q2FXT0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 87257 88549 . + . GCA_005502385.1_00613_gene GCA_005502385.1_00613 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVIFEVDEGLRTLLDFRFQRHFKAKKGENGQSSNMHGKNAEDLVLKVPPGTIIKSVETEEVLADLVEEGQRAVIARGGRGGRGNSRFATPRNPAPDFSENGEPGEELDVTLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDHRSFVMADLPGLIEGASEGVGLGHQFLRHVERTKVIVHMIDMSGSEGRNPLEDYQIINNELINYKQRLEDRPQIIVANKMDIPESNDNLELFKKEIDEDVTIVPVSTITRDNIDQLLYTIADKLEEVKDIDFSVEEDEDAGVNRVLYKHTPSQDKFTITRDDDGAYVVSGNAIERMFKMTDFNSDPAVRRFARQMRSMGIDDALRERGCSNGDIVRILGGEFEFVE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 87257 88549 . + . GCA_005502385.1_00613_mRNA GCA_005502385.1_00613 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVIFEVDEGLRTLLDFRFQRHFKAKKGENGQSSNMHGKNAEDLVLKVPPGTIIKSVETEEVLADLVEEGQRAVIARGGRGGRGNSRFATPRNPAPDFSENGEPGEELDVTLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDHRSFVMADLPGLIEGASEGVGLGHQFLRHVERTKVIVHMIDMSGSEGRNPLEDYQIINNELINYKQRLEDRPQIIVANKMDIPESNDNLELFKKEIDEDVTIVPVSTITRDNIDQLLYTIADKLEEVKDIDFSVEEDEDAGVNRVLYKHTPSQDKFTITRDDDGAYVVSGNAIERMFKMTDFNSDPAVRRFARQMRSMGIDDALRERGCSNGDIVRILGGEFEFVE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 87257 88549 . + 0 GCA_005502385.1_00613 GCA_005502385.1_00613_gene,GCA_005502385.1_00613_mRNA GCA_005502385.1_00613 GTPase Obg GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVIFEVDEGLRTLLDFRFQRHFKAKKGENGQSSNMHGKNAEDLVLKVPPGTIIKSVETEEVLADLVEEGQRAVIARGGRGGRGNSRFATPRNPAPDFSENGEPGEELDVTLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDHRSFVMADLPGLIEGASEGVGLGHQFLRHVERTKVIVHMIDMSGSEGRNPLEDYQIINNELINYKQRLEDRPQIIVANKMDIPESNDNLELFKKEIDEDVTIVPVSTITRDNIDQLLYTIADKLEEVKDIDFSVEEDEDAGVNRVLYKHTPSQDKFTITRDDDGAYVVSGNAIERMFKMTDFNSDPAVRRFARQMRSMGIDDALRERGCSNGDIVRILGGEFEFVE persistent 430 obgE GTPase ObgE 3.6.5.- GO:0000287,GO:0003924,GO:0005525,GO:0005737,GO:0042254 COG0536,DL WP_019835431.1 UPI0003639E1B UniRef100_UPI0003639E1B,UniRef50_P20964,UniRef90_Q2FXT1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 88562 89017 . + . GCA_005502385.1_00614_gene GCA_005502385.1_00614 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDSKDYKKFYLIREDVLPESVVKTLKIKDALKNDATLSIYEAVKQFNLSRSAFYKYRDTIFPVDEKIFEHREFTLILYVNDIVGMLAQVLQTISKLALSVLTIHQSVPMEEKATITLSLSAKDQSLSIEKVMGTLRNIQHVYKVELISMSM . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 88562 89017 . + . GCA_005502385.1_00614_mRNA GCA_005502385.1_00614 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDSKDYKKFYLIREDVLPESVVKTLKIKDALKNDATLSIYEAVKQFNLSRSAFYKYRDTIFPVDEKIFEHREFTLILYVNDIVGMLAQVLQTISKLALSVLTIHQSVPMEEKATITLSLSAKDQSLSIEKVMGTLRNIQHVYKVELISMSM . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 88562 89017 . + 0 GCA_005502385.1_00614 GCA_005502385.1_00614_gene,GCA_005502385.1_00614_mRNA GCA_005502385.1_00614 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDSKDYKKFYLIREDVLPESVVKTLKIKDALKNDATLSIYEAVKQFNLSRSAFYKYRDTIFPVDEKIFEHREFTLILYVNDIVGMLAQVLQTISKLALSVLTIHQSVPMEEKATITLSLSAKDQSLSIEKVMGTLRNIQHVYKVELISMSM persistent 151 ACT domain-containing protein 5.4.99.5 WP_017176158.1 UPI0002E17279 UniRef100_A0A4Q9WPT0,UniRef50_Q2FXT2,UniRef90_A0A657ZU00 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 89029 89634 . + . GCA_005502385.1_00615_gene GCA_005502385.1_00615 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYAYIKGHLSQLFPTHIVVETSNGIGYEIQTPNSYRFQKYLNQECKVFTSLIVREDAQLLYGFISEEEKEMFLSLIKVTGIGPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDLKGKVKITEETSETLLQVEGQVEENDNIIKEALLALAALGYSKRELSKVEKVLNKTSIHSVDEAVKIGLKTLVS . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 89029 89634 . + . GCA_005502385.1_00615_mRNA GCA_005502385.1_00615 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYAYIKGHLSQLFPTHIVVETSNGIGYEIQTPNSYRFQKYLNQECKVFTSLIVREDAQLLYGFISEEEKEMFLSLIKVTGIGPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDLKGKVKITEETSETLLQVEGQVEENDNIIKEALLALAALGYSKRELSKVEKVLNKTSIHSVDEAVKIGLKTLVS . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 89029 89634 . + 0 GCA_005502385.1_00615 GCA_005502385.1_00615_gene,GCA_005502385.1_00615_mRNA GCA_005502385.1_00615 Holliday junction ATP-dependent DNA helicase RuvA GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYAYIKGHLSQLFPTHIVVETSNGIGYEIQTPNSYRFQKYLNQECKVFTSLIVREDAQLLYGFISEEEKEMFLSLIKVTGIGPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDLKGKVKITEETSETLLQVEGQVEENDNIIKEALLALAALGYSKRELSKVEKVLNKTSIHSVDEAVKIGLKTLVS persistent 201 ruvA Holliday junction branch migration protein RuvA 3.6.4.12 GO:0003678,GO:0006281,GO:0006310,GO:0009378,GO:0009379 WP_019835430.1 UPI00036A94A3 UniRef100_UPI00036A94A3,UniRef50_Q2FXT3,UniRef90_A0A8X8GJ80 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 89664 90659 . + . GCA_005502385.1_00616_gene GCA_005502385.1_00616 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDDRMVDQSLHNEESSFEFSLRPTKLKQYIGQSSIKNNLEVFIKAAKLRDEPLDHVLLFGPPGLGKTTLSNIIANEMEVNIRTVSGPSLERPGDLAAILSGLQPGDVLFIDEIHRLSSVVEEVLYSAMEDFFLDIIIGKGDEARSIRIDLPPFTLVGATTRAGSLTGPLRDRFGVHLRLEYYSESDLKEIIIRTAEVLGTKIDDESAVELAKRSRGTPRVANRLLKRVRDFQQVNEDEQIYIETTKQALNLLQVDDEGLDYIDHKMMNCIINQYNGGPVGLDTIAVSIGEERITIEDVYEPFLIQKGFIERTPRGRKATPFAYEHFKKIKE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 89664 90659 . + . GCA_005502385.1_00616_mRNA GCA_005502385.1_00616 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDDRMVDQSLHNEESSFEFSLRPTKLKQYIGQSSIKNNLEVFIKAAKLRDEPLDHVLLFGPPGLGKTTLSNIIANEMEVNIRTVSGPSLERPGDLAAILSGLQPGDVLFIDEIHRLSSVVEEVLYSAMEDFFLDIIIGKGDEARSIRIDLPPFTLVGATTRAGSLTGPLRDRFGVHLRLEYYSESDLKEIIIRTAEVLGTKIDDESAVELAKRSRGTPRVANRLLKRVRDFQQVNEDEQIYIETTKQALNLLQVDDEGLDYIDHKMMNCIINQYNGGPVGLDTIAVSIGEERITIEDVYEPFLIQKGFIERTPRGRKATPFAYEHFKKIKE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 89664 90659 . + 0 GCA_005502385.1_00616 GCA_005502385.1_00616_gene,GCA_005502385.1_00616_mRNA GCA_005502385.1_00616 Holliday junction ATP-dependent DNA helicase RuvB GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDDRMVDQSLHNEESSFEFSLRPTKLKQYIGQSSIKNNLEVFIKAAKLRDEPLDHVLLFGPPGLGKTTLSNIIANEMEVNIRTVSGPSLERPGDLAAILSGLQPGDVLFIDEIHRLSSVVEEVLYSAMEDFFLDIIIGKGDEARSIRIDLPPFTLVGATTRAGSLTGPLRDRFGVHLRLEYYSESDLKEIIIRTAEVLGTKIDDESAVELAKRSRGTPRVANRLLKRVRDFQQVNEDEQIYIETTKQALNLLQVDDEGLDYIDHKMMNCIINQYNGGPVGLDTIAVSIGEERITIEDVYEPFLIQKGFIERTPRGRKATPFAYEHFKKIKE persistent 331 ruvB Holliday junction branch migration DNA helicase RuvB 3.6.4.-,3.6.4.12 GO:0000400,GO:0003677,GO:0003689,GO:0005524,GO:0005737,GO:0006281,GO:0006310,GO:0009378,GO:0016887,GO:0036121,GO:0048476,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518 COG2255,L WP_017176160.1 UPI00030F1566 UniRef100_A0A4Q9WPX1,UniRef50_O32055,UniRef90_Q2FXT4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 90669 91694 . + . GCA_005502385.1_00617_gene GCA_005502385.1_00617 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNVEEFDYHLPESLIAQTPLKNRDQSRLLVLGRKTGNIAHKHFTDIMDYFEPGDTLVLNDTRVMPARLFGLKEETGAKVEMLMLTRIEDNDWEVLLKPAKRIKVGNTLSFGNGKIIAECIKELEQGGRIMRLHYEGILEERLDELGEMPLPPYIKERLDDPDRYQTVYAKENGSAAAPTAGLHFTDELLQKIKDKGVNIAFITLHVGLGTFRPVSVEDIDDHEMHSEYYQMTKETADMLNKTKENGYRIISVGTTSTRTLETIRRDHEQFVATSGWTDIFIYPGFEYKAIDGLITNFHLPKSTLVMLVSAFSSREYILNAYKEAVKLKYRFFSFGDAMLII . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 90669 91694 . + . GCA_005502385.1_00617_mRNA GCA_005502385.1_00617 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNVEEFDYHLPESLIAQTPLKNRDQSRLLVLGRKTGNIAHKHFTDIMDYFEPGDTLVLNDTRVMPARLFGLKEETGAKVEMLMLTRIEDNDWEVLLKPAKRIKVGNTLSFGNGKIIAECIKELEQGGRIMRLHYEGILEERLDELGEMPLPPYIKERLDDPDRYQTVYAKENGSAAAPTAGLHFTDELLQKIKDKGVNIAFITLHVGLGTFRPVSVEDIDDHEMHSEYYQMTKETADMLNKTKENGYRIISVGTTSTRTLETIRRDHEQFVATSGWTDIFIYPGFEYKAIDGLITNFHLPKSTLVMLVSAFSSREYILNAYKEAVKLKYRFFSFGDAMLII . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 90669 91694 . + 0 GCA_005502385.1_00617 GCA_005502385.1_00617_gene,GCA_005502385.1_00617_mRNA GCA_005502385.1_00617 S-adenosylmethionine:tRNA ribosyltransferase-isomerase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNVEEFDYHLPESLIAQTPLKNRDQSRLLVLGRKTGNIAHKHFTDIMDYFEPGDTLVLNDTRVMPARLFGLKEETGAKVEMLMLTRIEDNDWEVLLKPAKRIKVGNTLSFGNGKIIAECIKELEQGGRIMRLHYEGILEERLDELGEMPLPPYIKERLDDPDRYQTVYAKENGSAAAPTAGLHFTDELLQKIKDKGVNIAFITLHVGLGTFRPVSVEDIDDHEMHSEYYQMTKETADMLNKTKENGYRIISVGTTSTRTLETIRRDHEQFVATSGWTDIFIYPGFEYKAIDGLITNFHLPKSTLVMLVSAFSSREYILNAYKEAVKLKYRFFSFGDAMLII persistent 341 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 2.4.99.17 GO:0016740,GO:0016853 WP_049413805.1 UPI00066C1E78 UniRef100_UPI00066C1E78,UniRef50_A8AYK5,UniRef90_A0A8X8GPE2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 91714 92853 . + . GCA_005502385.1_00618_gene GCA_005502385.1_00618 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPAVTYEHIKTCKQSGARLGIVHTPHGSFETPMFMPVGTKATVKTMSPEELRQIEARIILGNTYHLWLQPGNDIIKQAGGLHKFMNWDGPILTDSGGFQVFSLSNLRKISEEGVEFRHHTNGSKLFLSPEKSMQIQNDLGSDIMMAFDECPPMPAEYKYVKDSIERTTRWAKRCLEAHQRPEDQALFGIIQGGEYKDLREQSAKELVSLDFPGYAIGGLSVGEPKPVMYDMVEHTVQFMPEDKPRYLMGVGSPDALIECSIRGMDMFDCVLPTRIARNGTCMTSQGRLVIKNAKYADDFSPIDANCDCYTCKNYTRAYIRHLIKAEETFGIRLTTIHNLHFLLKLMEDIRQAIREDRLLDFKEEFFEQYGLNVENPKNF . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 91714 92853 . + . GCA_005502385.1_00618_mRNA GCA_005502385.1_00618 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPAVTYEHIKTCKQSGARLGIVHTPHGSFETPMFMPVGTKATVKTMSPEELRQIEARIILGNTYHLWLQPGNDIIKQAGGLHKFMNWDGPILTDSGGFQVFSLSNLRKISEEGVEFRHHTNGSKLFLSPEKSMQIQNDLGSDIMMAFDECPPMPAEYKYVKDSIERTTRWAKRCLEAHQRPEDQALFGIIQGGEYKDLREQSAKELVSLDFPGYAIGGLSVGEPKPVMYDMVEHTVQFMPEDKPRYLMGVGSPDALIECSIRGMDMFDCVLPTRIARNGTCMTSQGRLVIKNAKYADDFSPIDANCDCYTCKNYTRAYIRHLIKAEETFGIRLTTIHNLHFLLKLMEDIRQAIREDRLLDFKEEFFEQYGLNVENPKNF . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 91714 92853 . + 0 GCA_005502385.1_00618 GCA_005502385.1_00618_gene,GCA_005502385.1_00618_mRNA GCA_005502385.1_00618 Queuine tRNA-ribosyltransferase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPAVTYEHIKTCKQSGARLGIVHTPHGSFETPMFMPVGTKATVKTMSPEELRQIEARIILGNTYHLWLQPGNDIIKQAGGLHKFMNWDGPILTDSGGFQVFSLSNLRKISEEGVEFRHHTNGSKLFLSPEKSMQIQNDLGSDIMMAFDECPPMPAEYKYVKDSIERTTRWAKRCLEAHQRPEDQALFGIIQGGEYKDLREQSAKELVSLDFPGYAIGGLSVGEPKPVMYDMVEHTVQFMPEDKPRYLMGVGSPDALIECSIRGMDMFDCVLPTRIARNGTCMTSQGRLVIKNAKYADDFSPIDANCDCYTCKNYTRAYIRHLIKAEETFGIRLTTIHNLHFLLKLMEDIRQAIREDRLLDFKEEFFEQYGLNVENPKNF persistent 379 tgt tRNA guanosine(34) transglycosylase Tgt 2.4.2.29 GO:0002099,GO:0005737,GO:0005829,GO:0006400,GO:0008479,GO:0008616,GO:0046872,GO:0101030 COG0343,J WP_017176162.1 UPI0002E6481C UniRef100_A0A4Q9WR46,UniRef50_O32053,UniRef90_Q2FXT6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 92870 93130 . + . GCA_005502385.1_00619_gene GCA_005502385.1_00619 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNVSALILPIILIIVFYFFLIRPQQKRAKEHREMISRIEAGQKITTIGGIKGTVKAVDETAVVITVNGHGTEMTFEKPAIKQVDPS . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 92870 93130 . + . GCA_005502385.1_00619_mRNA GCA_005502385.1_00619 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNVSALILPIILIIVFYFFLIRPQQKRAKEHREMISRIEAGQKITTIGGIKGTVKAVDETAVVITVNGHGTEMTFEKPAIKQVDPS . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 92870 93130 . + 0 GCA_005502385.1_00619 GCA_005502385.1_00619_gene,GCA_005502385.1_00619_mRNA GCA_005502385.1_00619 Sec translocon accessory complex subunit YajC GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNVSALILPIILIIVFYFFLIRPQQKRAKEHREMISRIEAGQKITTIGGIKGTVKAVDETAVVITVNGHGTEMTFEKPAIKQVDPS persistent 86 yajC preprotein translocase subunit YajC GO:0005886,GO:0009306,GO:0015450 COG1862,U WP_002448938.1 UPI00019FCB8A UniRef100_A0A1L8Y516,UniRef50_B9DNG6,UniRef90_A0A2A1KA09 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 93326 95611 . + . GCA_005502385.1_00620_gene GCA_005502385.1_00620 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKTSRIIAFILIVALLFVGMGFTYKNVVKNVNLGLDLQGGFEVLYQVKPLGGDGKIDDKALQSTAQTLENRVNVLGVSEPHIQVEDPDRIRVQLAGVKNPDEARKILSSQANLTIRDANDHVKLTGKDIVQGSAKQEFKQGTNEPAVTFKLKDRAKFKKVTEEISKKQENMMVVWLDYKKGDSYHKELDKPEDKRKYVSAASVDQPINSDSVEISGGFQGQQGVERAKQIAELLNAGSLPVDLKEVYSNSVGAQFGQDALDKTIFASMIGVAIIYLFMVGFYRLPGIVAVIALTVYVYLTLVAFNFISGVLTLPGLAALVLGVGMAVDANIIMYERIKDELRVGRTLKQAYSKANKSSFLTIFDSNLTTVIAAAVLFFFGQSSVKGFATMLLLGILMIFITAVFLSRGLLSLLVSSNYFKKKYWMFGVNKNNRHDINEGVDVHDLKTAFEKWNFVKLAKPLIGVSILILVIGIIILSIFKLNLGIDFSAGTRVDLDSDTKLSQTKVERTIKDVGLTPDQIQINGNDNKQATVQFKNDLSKDETLKLNKVINDQYGHKPTVNTVSPMIGQELAKNAMKALIYAAIGIIIYVSLRFEWRMGLSAVLALLHDVFIIVAIFSLLRLEVDITFIAAILTIVGYSINDTIVTFDRVRENLHKIKVITDPHQIDDIVNRSIRQTMTRSINTVLTVVVVVIAILIFGASSLFNFSLALLIGLLSGVFSSIFIAVPLWSIMKKHQLKKSENGKLVVYKEKKSNDEKILV . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 93326 95611 . + . GCA_005502385.1_00620_mRNA GCA_005502385.1_00620 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKTSRIIAFILIVALLFVGMGFTYKNVVKNVNLGLDLQGGFEVLYQVKPLGGDGKIDDKALQSTAQTLENRVNVLGVSEPHIQVEDPDRIRVQLAGVKNPDEARKILSSQANLTIRDANDHVKLTGKDIVQGSAKQEFKQGTNEPAVTFKLKDRAKFKKVTEEISKKQENMMVVWLDYKKGDSYHKELDKPEDKRKYVSAASVDQPINSDSVEISGGFQGQQGVERAKQIAELLNAGSLPVDLKEVYSNSVGAQFGQDALDKTIFASMIGVAIIYLFMVGFYRLPGIVAVIALTVYVYLTLVAFNFISGVLTLPGLAALVLGVGMAVDANIIMYERIKDELRVGRTLKQAYSKANKSSFLTIFDSNLTTVIAAAVLFFFGQSSVKGFATMLLLGILMIFITAVFLSRGLLSLLVSSNYFKKKYWMFGVNKNNRHDINEGVDVHDLKTAFEKWNFVKLAKPLIGVSILILVIGIIILSIFKLNLGIDFSAGTRVDLDSDTKLSQTKVERTIKDVGLTPDQIQINGNDNKQATVQFKNDLSKDETLKLNKVINDQYGHKPTVNTVSPMIGQELAKNAMKALIYAAIGIIIYVSLRFEWRMGLSAVLALLHDVFIIVAIFSLLRLEVDITFIAAILTIVGYSINDTIVTFDRVRENLHKIKVITDPHQIDDIVNRSIRQTMTRSINTVLTVVVVVIAILIFGASSLFNFSLALLIGLLSGVFSSIFIAVPLWSIMKKHQLKKSENGKLVVYKEKKSNDEKILV . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 93326 95611 . + 0 GCA_005502385.1_00620 GCA_005502385.1_00620_gene,GCA_005502385.1_00620_mRNA GCA_005502385.1_00620 Protein translocase subunit SecDF GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKTSRIIAFILIVALLFVGMGFTYKNVVKNVNLGLDLQGGFEVLYQVKPLGGDGKIDDKALQSTAQTLENRVNVLGVSEPHIQVEDPDRIRVQLAGVKNPDEARKILSSQANLTIRDANDHVKLTGKDIVQGSAKQEFKQGTNEPAVTFKLKDRAKFKKVTEEISKKQENMMVVWLDYKKGDSYHKELDKPEDKRKYVSAASVDQPINSDSVEISGGFQGQQGVERAKQIAELLNAGSLPVDLKEVYSNSVGAQFGQDALDKTIFASMIGVAIIYLFMVGFYRLPGIVAVIALTVYVYLTLVAFNFISGVLTLPGLAALVLGVGMAVDANIIMYERIKDELRVGRTLKQAYSKANKSSFLTIFDSNLTTVIAAAVLFFFGQSSVKGFATMLLLGILMIFITAVFLSRGLLSLLVSSNYFKKKYWMFGVNKNNRHDINEGVDVHDLKTAFEKWNFVKLAKPLIGVSILILVIGIIILSIFKLNLGIDFSAGTRVDLDSDTKLSQTKVERTIKDVGLTPDQIQINGNDNKQATVQFKNDLSKDETLKLNKVINDQYGHKPTVNTVSPMIGQELAKNAMKALIYAAIGIIIYVSLRFEWRMGLSAVLALLHDVFIIVAIFSLLRLEVDITFIAAILTIVGYSINDTIVTFDRVRENLHKIKVITDPHQIDDIVNRSIRQTMTRSINTVLTVVVVVIAILIFGASSLFNFSLALLIGLLSGVFSSIFIAVPLWSIMKKHQLKKSENGKLVVYKEKKSNDEKILV persistent 761 secDF protein translocase subunit SecDF COG0342,U WP_137689459.1 UPI0010F734A4 UniRef100_UPI0010F734A4,UniRef50_B9E715,UniRef90_Q4L6Y2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 95737 98010 . + . GCA_005502385.1_00621_gene GCA_005502385.1_00621 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIQSKYKWLYEAPKQDISSEIIKEFNLSPIVRKILENKSITQYDEINTLINGTNKKHDSWLMSDMRKAVDRINLAIDKHERILVYGDYDADGVTSTTILVQTLQKLGAEVGWYIPNRFSEGYGPNKYAFQNAYDEGVSLIITVDNGIQGHEEIEMVQALGVDVIVTDHHEIGRTLPKAYAIIHPMHPEFEYPFKYLCGAGVAYKLSQCLIDHPPEYFIALATIGTIADLVSLTDENRTIVQEGLKYLNQSCPFQIQSLLNQAGFNDEIDEETIGFIIGPRLNAVGRLEDASLAAELLMAEDSEEANFLAEQVEAFNIERKDIVAQITEEALLMANEKVENGDKFLLLAKEGWHEGVLGIVASKIVETYALPTLILNIDLEQHHAKGSARSIEQVSMFEILSAHQDLISKFGGHHMAAGMTMEINNIDALSKGLNEWMVQLSKHTSLEPTKHITTKLSEDDITVSNIHDIKILKPFGTDFDKPLFELDDTEVNDVKAIGKDKNHLKLVTGQAKLQHLFWKNGDLITQIELGQPVNIIGHLQINEWNGNQTPQMMIQDLATQNEQILDYRSKRKQLNIDTSSKNVAFVIHSKKEKLGENYFHYGETIDSSYNTIVFRDLPTDLDSVTQSLKHLEYSQLYLVLHHQHSIYFEGLPSSHLFKQSYRALFIRKEMNLEKEGLQLCQYLNIKPNTLKFILKVFLDLSFIYEENGIIKINDNPSKQSIESSQVYKSRQSRIEVEKLMLYDDFSHLKNWIKAQKA . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 95737 98010 . + . GCA_005502385.1_00621_mRNA GCA_005502385.1_00621 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIQSKYKWLYEAPKQDISSEIIKEFNLSPIVRKILENKSITQYDEINTLINGTNKKHDSWLMSDMRKAVDRINLAIDKHERILVYGDYDADGVTSTTILVQTLQKLGAEVGWYIPNRFSEGYGPNKYAFQNAYDEGVSLIITVDNGIQGHEEIEMVQALGVDVIVTDHHEIGRTLPKAYAIIHPMHPEFEYPFKYLCGAGVAYKLSQCLIDHPPEYFIALATIGTIADLVSLTDENRTIVQEGLKYLNQSCPFQIQSLLNQAGFNDEIDEETIGFIIGPRLNAVGRLEDASLAAELLMAEDSEEANFLAEQVEAFNIERKDIVAQITEEALLMANEKVENGDKFLLLAKEGWHEGVLGIVASKIVETYALPTLILNIDLEQHHAKGSARSIEQVSMFEILSAHQDLISKFGGHHMAAGMTMEINNIDALSKGLNEWMVQLSKHTSLEPTKHITTKLSEDDITVSNIHDIKILKPFGTDFDKPLFELDDTEVNDVKAIGKDKNHLKLVTGQAKLQHLFWKNGDLITQIELGQPVNIIGHLQINEWNGNQTPQMMIQDLATQNEQILDYRSKRKQLNIDTSSKNVAFVIHSKKEKLGENYFHYGETIDSSYNTIVFRDLPTDLDSVTQSLKHLEYSQLYLVLHHQHSIYFEGLPSSHLFKQSYRALFIRKEMNLEKEGLQLCQYLNIKPNTLKFILKVFLDLSFIYEENGIIKINDNPSKQSIESSQVYKSRQSRIEVEKLMLYDDFSHLKNWIKAQKA . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 95737 98010 . + 0 GCA_005502385.1_00621 GCA_005502385.1_00621_gene,GCA_005502385.1_00621_mRNA GCA_005502385.1_00621 hypothetical protein """""" GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIQSKYKWLYEAPKQDISSEIIKEFNLSPIVRKILENKSITQYDEINTLINGTNKKHDSWLMSDMRKAVDRINLAIDKHERILVYGDYDADGVTSTTILVQTLQKLGAEVGWYIPNRFSEGYGPNKYAFQNAYDEGVSLIITVDNGIQGHEEIEMVQALGVDVIVTDHHEIGRTLPKAYAIIHPMHPEFEYPFKYLCGAGVAYKLSQCLIDHPPEYFIALATIGTIADLVSLTDENRTIVQEGLKYLNQSCPFQIQSLLNQAGFNDEIDEETIGFIIGPRLNAVGRLEDASLAAELLMAEDSEEANFLAEQVEAFNIERKDIVAQITEEALLMANEKVENGDKFLLLAKEGWHEGVLGIVASKIVETYALPTLILNIDLEQHHAKGSARSIEQVSMFEILSAHQDLISKFGGHHMAAGMTMEINNIDALSKGLNEWMVQLSKHTSLEPTKHITTKLSEDDITVSNIHDIKILKPFGTDFDKPLFELDDTEVNDVKAIGKDKNHLKLVTGQAKLQHLFWKNGDLITQIELGQPVNIIGHLQINEWNGNQTPQMMIQDLATQNEQILDYRSKRKQLNIDTSSKNVAFVIHSKKEKLGENYFHYGETIDSSYNTIVFRDLPTDLDSVTQSLKHLEYSQLYLVLHHQHSIYFEGLPSSHLFKQSYRALFIRKEMNLEKEGLQLCQYLNIKPNTLKFILKVFLDLSFIYEENGIIKINDNPSKQSIESSQVYKSRQSRIEVEKLMLYDDFSHLKNWIKAQKA persistent 757 recJ single-stranded-DNA-specific exonuclease RecJ 3.1.-.- GO:0006281,GO:0006310,GO:0008409 UniRef50_A0AAP8TSV1,UniRef90_A0A3S7GY50 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 98032 98550 . + . GCA_005502385.1_00622_gene GCA_005502385.1_00622 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDLKQYVSEVQGWPKPGVSFKDITTIMDNGEAYGYATDQIVKYAKDRNVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEELGGIVVGIAFIIELKYLNGMEKIKDYDVMSLISYDE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 98032 98550 . + . GCA_005502385.1_00622_mRNA GCA_005502385.1_00622 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDLKQYVSEVQGWPKPGVSFKDITTIMDNGEAYGYATDQIVKYAKDRNVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEELGGIVVGIAFIIELKYLNGMEKIKDYDVMSLISYDE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 98032 98550 . + 0 GCA_005502385.1_00622 GCA_005502385.1_00622_gene,GCA_005502385.1_00622_mRNA GCA_005502385.1_00622 Adenine phosphoribosyltransferase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDLKQYVSEVQGWPKPGVSFKDITTIMDNGEAYGYATDQIVKYAKDRNVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEELGGIVVGIAFIIELKYLNGMEKIKDYDVMSLISYDE persistent 172 apt adenine phosphoribosyltransferase 2.4.2.7 GO:0002055,GO:0003999,GO:0005737,GO:0006166,GO:0006168,GO:0009116,GO:0016208,GO:0044209 COG0503,F WP_054105785.1 UPI0006B906DF UniRef100_UPI0006B906DF,UniRef50_Q1G9R7,UniRef90_Q2FXU0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 98884 101073 . + . GCA_005502385.1_00623_gene GCA_005502385.1_00623 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNNEYPYSADEVLNKAKSYLSADDYQYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKNMFNGEIARIVDGVTKLKKVKYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMAREKQIRISKETLEIYAPLAHRLGINTIKWELEDIALRYIDSVQYFRIVNLMKKKRSEREAYIQNAMDKIQTEMNKMNIQGEISGRPKHIYSIYRKMIKQKKQFDQIFDLLAIRVIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVGPNGDPLEIQIRTFEMHEIAEHGVAAHWAYKEGKTINSKTQDFQNKLNWLKELAETDHTSSDAQEFMESLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYILKTGDIIEIRTSKHSYGPSRDWLKIVKSSGAKSKIKSFFKKQDRSSNIEKGKFMVEAEIKEQGYRVDEILTEKNIEVVNEKYHFANDDDLYAAVGFGGVTALQVVNKLTERQRIQDKQKALNEAQEVIKTSPIKEDIITDSGVYVEGLENVLIKLSKCCNPIPGDDIVGYITKGHGIKVHRSDCPNIKNENERLINVEWVKSKDSTQRYQVDLEVNAYDRNGLLNEVIQAVNSTVGSIIKMNARSDIDKNAIITISVMVKNVNDVFRVVEKLKQLSDIYTVSRVWN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 98884 101073 . + . GCA_005502385.1_00623_mRNA GCA_005502385.1_00623 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNNEYPYSADEVLNKAKSYLSADDYQYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKNMFNGEIARIVDGVTKLKKVKYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMAREKQIRISKETLEIYAPLAHRLGINTIKWELEDIALRYIDSVQYFRIVNLMKKKRSEREAYIQNAMDKIQTEMNKMNIQGEISGRPKHIYSIYRKMIKQKKQFDQIFDLLAIRVIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVGPNGDPLEIQIRTFEMHEIAEHGVAAHWAYKEGKTINSKTQDFQNKLNWLKELAETDHTSSDAQEFMESLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYILKTGDIIEIRTSKHSYGPSRDWLKIVKSSGAKSKIKSFFKKQDRSSNIEKGKFMVEAEIKEQGYRVDEILTEKNIEVVNEKYHFANDDDLYAAVGFGGVTALQVVNKLTERQRIQDKQKALNEAQEVIKTSPIKEDIITDSGVYVEGLENVLIKLSKCCNPIPGDDIVGYITKGHGIKVHRSDCPNIKNENERLINVEWVKSKDSTQRYQVDLEVNAYDRNGLLNEVIQAVNSTVGSIIKMNARSDIDKNAIITISVMVKNVNDVFRVVEKLKQLSDIYTVSRVWN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 98884 101073 . + 0 GCA_005502385.1_00623 GCA_005502385.1_00623_gene,GCA_005502385.1_00623_mRNA GCA_005502385.1_00623 GTP pyrophosphokinase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNNEYPYSADEVLNKAKSYLSADDYQYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKNMFNGEIARIVDGVTKLKKVKYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMAREKQIRISKETLEIYAPLAHRLGINTIKWELEDIALRYIDSVQYFRIVNLMKKKRSEREAYIQNAMDKIQTEMNKMNIQGEISGRPKHIYSIYRKMIKQKKQFDQIFDLLAIRVIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVGPNGDPLEIQIRTFEMHEIAEHGVAAHWAYKEGKTINSKTQDFQNKLNWLKELAETDHTSSDAQEFMESLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYILKTGDIIEIRTSKHSYGPSRDWLKIVKSSGAKSKIKSFFKKQDRSSNIEKGKFMVEAEIKEQGYRVDEILTEKNIEVVNEKYHFANDDDLYAAVGFGGVTALQVVNKLTERQRIQDKQKALNEAQEVIKTSPIKEDIITDSGVYVEGLENVLIKLSKCCNPIPGDDIVGYITKGHGIKVHRSDCPNIKNENERLINVEWVKSKDSTQRYQVDLEVNAYDRNGLLNEVIQAVNSTVGSIIKMNARSDIDKNAIITISVMVKNVNDVFRVVEKLKQLSDIYTVSRVWN persistent 729 relA GTP pyrophosphokinase 2.7.6.5 GO:0005524,GO:0005525,GO:0005886,GO:0008728,GO:0015970,GO:0016301 COG0317,TK UniRef50_Q931Q4,UniRef90_Q931Q4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 101089 101541 . + . GCA_005502385.1_00624_gene GCA_005502385.1_00624 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIVVQRVKRASVTNKSIHNQIEKGYCLLVGVGKNSTEADIEVLAKKIVNARLFEDENGKLNLNIQQINGAILSISQFTLYAEVKKGNRPGFSQSMRPEDAKILYDKFNSELQKYDIDIQTGEFGTDMDVEIINDGPVTIIYESQDGKVI . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 101089 101541 . + . GCA_005502385.1_00624_mRNA GCA_005502385.1_00624 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIVVQRVKRASVTNKSIHNQIEKGYCLLVGVGKNSTEADIEVLAKKIVNARLFEDENGKLNLNIQQINGAILSISQFTLYAEVKKGNRPGFSQSMRPEDAKILYDKFNSELQKYDIDIQTGEFGTDMDVEIINDGPVTIIYESQDGKVI . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 101089 101541 . + 0 GCA_005502385.1_00624 GCA_005502385.1_00624_gene,GCA_005502385.1_00624_mRNA GCA_005502385.1_00624 D-aminoacyl-tRNA deacylase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIVVQRVKRASVTNKSIHNQIEKGYCLLVGVGKNSTEADIEVLAKKIVNARLFEDENGKLNLNIQQINGAILSISQFTLYAEVKKGNRPGFSQSMRPEDAKILYDKFNSELQKYDIDIQTGEFGTDMDVEIINDGPVTIIYESQDGKVI persistent 150 dtd D-aminoacyl-tRNA deacylase 3.1.1.96 GO:0004045,GO:0008152 WP_019835426.1 UPI00035E1865 UniRef100_UPI00035E1865,UniRef50_Q2FXU2,UniRef90_A0A6B8SHB2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 101538 102413 . + . GCA_005502385.1_00625_gene GCA_005502385.1_00625 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNKLDTWLTKHDLKNMLTLVVVLLFILFIILLFLFMNHNDQDSNRLTITEDAEIRTGPNAGYPVIYKVEKGDSFKKLKTSGKWIEVQNAKGDEKGWVAGWHTSLNIKADVSKQENPFKNKTVVLDPGHGGSDQGASSSTALKSLEKNYTLKTALELKRALEKAGAHVKLTRTDDSYVSLDNRKATGDVFISIHNDSLDSHNANGATVYWYQNSQETLAEVLNANIQKKSLLSNRGVRQQNYQVLRQTNKPAVLLELGYISNPTDEKMIRNQLHRQVVEEAVVDGLKQYFAS . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 101538 102413 . + . GCA_005502385.1_00625_mRNA GCA_005502385.1_00625 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNKLDTWLTKHDLKNMLTLVVVLLFILFIILLFLFMNHNDQDSNRLTITEDAEIRTGPNAGYPVIYKVEKGDSFKKLKTSGKWIEVQNAKGDEKGWVAGWHTSLNIKADVSKQENPFKNKTVVLDPGHGGSDQGASSSTALKSLEKNYTLKTALELKRALEKAGAHVKLTRTDDSYVSLDNRKATGDVFISIHNDSLDSHNANGATVYWYQNSQETLAEVLNANIQKKSLLSNRGVRQQNYQVLRQTNKPAVLLELGYISNPTDEKMIRNQLHRQVVEEAVVDGLKQYFAS . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 101538 102413 . + 0 GCA_005502385.1_00625 GCA_005502385.1_00625_gene,GCA_005502385.1_00625_mRNA GCA_005502385.1_00625 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNKLDTWLTKHDLKNMLTLVVVLLFILFIILLFLFMNHNDQDSNRLTITEDAEIRTGPNAGYPVIYKVEKGDSFKKLKTSGKWIEVQNAKGDEKGWVAGWHTSLNIKADVSKQENPFKNKTVVLDPGHGGSDQGASSSTALKSLEKNYTLKTALELKRALEKAGAHVKLTRTDDSYVSLDNRKATGDVFISIHNDSLDSHNANGATVYWYQNSQETLAEVLNANIQKKSLLSNRGVRQQNYQVLRQTNKPAVLLELGYISNPTDEKMIRNQLHRQVVEEAVVDGLKQYFAS persistent 291 lytH putative cell wall amidase lytH 3.5.1.28 WP_017176168.1 UPI0002D3FAD2 UniRef100_A0A4Q9WS21,UniRef50_Q2FXU3,UniRef90_A0A6N0I4F2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 102765 104042 . + . GCA_005502385.1_00626_gene GCA_005502385.1_00626 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIKIPRGTQDILPQESAKWRYIENKLDELMKLYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDKGDRSITLRPEGTAAVVRSYIENKMQGEPNQPIKLYYNGPMFRYERKQKGRYRQFNQFGVEAIGAENPSIDAEVLAMVMHIYESFGLKHLKLVINSIGDQASRKEYNEALIKHFEPVIDTFCNDCQSRLHTNPMRILDCKVDRDKEAVKHAPRITDYLNDESKAYYEAVKHHLDQLGINYVEDPNLVRGLDYYTHTAFELMMDNPNYDGAITTLCGGGRYNGLLELLDGPKQTGIGFALSIERLLLALEEEDIELNVDEDFDLFVVTMGEKAEQYSVKLLNDLRKHGVKADKDYLNRKIKGQMKQADRLNAKYTIVIGDQELDNNKIDVKEMSTGETKTIQLDEVVSFFNKEKENK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 102765 104042 . + . GCA_005502385.1_00626_mRNA GCA_005502385.1_00626 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIKIPRGTQDILPQESAKWRYIENKLDELMKLYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDKGDRSITLRPEGTAAVVRSYIENKMQGEPNQPIKLYYNGPMFRYERKQKGRYRQFNQFGVEAIGAENPSIDAEVLAMVMHIYESFGLKHLKLVINSIGDQASRKEYNEALIKHFEPVIDTFCNDCQSRLHTNPMRILDCKVDRDKEAVKHAPRITDYLNDESKAYYEAVKHHLDQLGINYVEDPNLVRGLDYYTHTAFELMMDNPNYDGAITTLCGGGRYNGLLELLDGPKQTGIGFALSIERLLLALEEEDIELNVDEDFDLFVVTMGEKAEQYSVKLLNDLRKHGVKADKDYLNRKIKGQMKQADRLNAKYTIVIGDQELDNNKIDVKEMSTGETKTIQLDEVVSFFNKEKENK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 102765 104042 . + 0 GCA_005502385.1_00626 GCA_005502385.1_00626_gene,GCA_005502385.1_00626_mRNA GCA_005502385.1_00626 Histidine--tRNA ligase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIKIPRGTQDILPQESAKWRYIENKLDELMKLYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDKGDRSITLRPEGTAAVVRSYIENKMQGEPNQPIKLYYNGPMFRYERKQKGRYRQFNQFGVEAIGAENPSIDAEVLAMVMHIYESFGLKHLKLVINSIGDQASRKEYNEALIKHFEPVIDTFCNDCQSRLHTNPMRILDCKVDRDKEAVKHAPRITDYLNDESKAYYEAVKHHLDQLGINYVEDPNLVRGLDYYTHTAFELMMDNPNYDGAITTLCGGGRYNGLLELLDGPKQTGIGFALSIERLLLALEEEDIELNVDEDFDLFVVTMGEKAEQYSVKLLNDLRKHGVKADKDYLNRKIKGQMKQADRLNAKYTIVIGDQELDNNKIDVKEMSTGETKTIQLDEVVSFFNKEKENK persistent 425 hisS histidine--tRNA ligase 6.1.1.21 GO:0004821,GO:0005524,GO:0005737,GO:0006427 WP_019835425.1 UPI000382104D UniRef100_UPI000382104D,UniRef50_O32039,UniRef90_A0A3S7GXK9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 104042 105808 . + . GCA_005502385.1_00627_gene GCA_005502385.1_00627 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGKRTTYCGLVTEELLGQKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSKEALSIAETVRSEYVVEVEGSVTKRDPETVNPKIKTGQVEVQVSNIRIINKSATPPFSINEENQSVDENIRLKYRYLDLRRPELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYLVPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQEDIIQMGEEMLSKVVKDVKGIDIQTPFPRMTYDEAMKRYGSDKPDTRFGMELQDVSQLGKEMDFKVFKDTVEHDGEVKAIVAEGAADNYTRKDMDGLTEFVNIYGAKGLAWVKVVDEGLSGPIARFFEEENVNTLKELTGAKPGDLVMFVADKPNVVAQSLGALRIKIAKELKLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEEDIAKLDSEPEKVQANAYDVVLNGYELGGGSIRISDGELQEKMFEVLGFTKEQAREQFGFLLDAFKYGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPSEVSDKQLEELSLRIRH . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 104042 105808 . + . GCA_005502385.1_00627_mRNA GCA_005502385.1_00627 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGKRTTYCGLVTEELLGQKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSKEALSIAETVRSEYVVEVEGSVTKRDPETVNPKIKTGQVEVQVSNIRIINKSATPPFSINEENQSVDENIRLKYRYLDLRRPELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYLVPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQEDIIQMGEEMLSKVVKDVKGIDIQTPFPRMTYDEAMKRYGSDKPDTRFGMELQDVSQLGKEMDFKVFKDTVEHDGEVKAIVAEGAADNYTRKDMDGLTEFVNIYGAKGLAWVKVVDEGLSGPIARFFEEENVNTLKELTGAKPGDLVMFVADKPNVVAQSLGALRIKIAKELKLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEEDIAKLDSEPEKVQANAYDVVLNGYELGGGSIRISDGELQEKMFEVLGFTKEQAREQFGFLLDAFKYGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPSEVSDKQLEELSLRIRH . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 104042 105808 . + 0 GCA_005502385.1_00627 GCA_005502385.1_00627_gene,GCA_005502385.1_00627_mRNA GCA_005502385.1_00627 Aspartate--tRNA ligase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGKRTTYCGLVTEELLGQKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSKEALSIAETVRSEYVVEVEGSVTKRDPETVNPKIKTGQVEVQVSNIRIINKSATPPFSINEENQSVDENIRLKYRYLDLRRPELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYLVPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQEDIIQMGEEMLSKVVKDVKGIDIQTPFPRMTYDEAMKRYGSDKPDTRFGMELQDVSQLGKEMDFKVFKDTVEHDGEVKAIVAEGAADNYTRKDMDGLTEFVNIYGAKGLAWVKVVDEGLSGPIARFFEEENVNTLKELTGAKPGDLVMFVADKPNVVAQSLGALRIKIAKELKLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEEDIAKLDSEPEKVQANAYDVVLNGYELGGGSIRISDGELQEKMFEVLGFTKEQAREQFGFLLDAFKYGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPSEVSDKQLEELSLRIRH persistent 588 aspS aspartate--tRNA ligase 6.1.1.12 GO:0000166,GO:0003676,GO:0004812,GO:0004815,GO:0005524,GO:0005737,GO:0006418,GO:0006422,GO:0016740,GO:0016874 COG0173,J WP_070436596.1 UPI0008A4F9BD UniRef100_UPI0008A4F9BD,UniRef50_A9KIA6,UniRef90_Q5HNS2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 106021 106211 . + . GCA_005502385.1_00628_gene GCA_005502385.1_00628 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 106021 106211 . + . GCA_005502385.1_00628_mRNA GCA_005502385.1_00628 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 Infernal:001001 misc_RNA 106021 106211 101.0 + . GCA_005502385.1_00628 GCA_005502385.1_00628_gene,GCA_005502385.1_00628_mRNA GCA_005502385.1_00628 6S GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 106298 107074 . + . GCA_005502385.1_00629_gene GCA_005502385.1_00629 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKHQFSRNELAYGQEGLDLLKNKTVAVLGVGGVGSFAAEALARTNIGHIILIDKDDVDITNVNRQIHALTTTIGQSKVTLMEERIKLINPDCKVTSLHMFYTEETYEDIFNNYDIDYFIDASDTIIYKVHLMKECLDRGIKLISSMGAANKIDPTRFKIADISKTYMDPMAKIIRNKLKKLGIKKGVPVVFSDESPIVIREDVKKTVGDANAINRKGQMPPSSNAFVPSTVGLICASYVVNDILKDIPVRRIKDKGNN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 106298 107074 . + . GCA_005502385.1_00629_mRNA GCA_005502385.1_00629 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKHQFSRNELAYGQEGLDLLKNKTVAVLGVGGVGSFAAEALARTNIGHIILIDKDDVDITNVNRQIHALTTTIGQSKVTLMEERIKLINPDCKVTSLHMFYTEETYEDIFNNYDIDYFIDASDTIIYKVHLMKECLDRGIKLISSMGAANKIDPTRFKIADISKTYMDPMAKIIRNKLKKLGIKKGVPVVFSDESPIVIREDVKKTVGDANAINRKGQMPPSSNAFVPSTVGLICASYVVNDILKDIPVRRIKDKGNN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 106298 107074 . + 0 GCA_005502385.1_00629 GCA_005502385.1_00629_gene,GCA_005502385.1_00629_mRNA GCA_005502385.1_00629 tRNA threonylcarbamoyladenosine dehydratase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKHQFSRNELAYGQEGLDLLKNKTVAVLGVGGVGSFAAEALARTNIGHIILIDKDDVDITNVNRQIHALTTTIGQSKVTLMEERIKLINPDCKVTSLHMFYTEETYEDIFNNYDIDYFIDASDTIIYKVHLMKECLDRGIKLISSMGAANKIDPTRFKIADISKTYMDPMAKIIRNKLKKLGIKKGVPVVFSDESPIVIREDVKKTVGDANAINRKGQMPPSSNAFVPSTVGLICASYVVNDILKDIPVRRIKDKGNN persistent 258 tcdA HesA/moeB/thiF family protein COG1179,J WP_049382005.1 UPI00066EDEF2 UniRef100_UPI00066EDEF2,UniRef50_A0A2S5CXU7,UniRef90_A0A380G1C8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 107129 108397 . - . GCA_005502385.1_00630_gene GCA_005502385.1_00630 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNTEPLASRMRPTNINEIISQQHLVGPRGIIRRMVETKKLSSMIFYGPPGIGKTSIAKAIAGSTEYKFRQLNAVTNTKKDMQMIVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIILIGATTSNPYHAINPAIRSRVQIFELYPLDEKDVYQALTRALNDDQNGLKSYQPKIDEDALKYFSTQSHGDVRSALNALELAVLSAKVSNNQRHVTLEDAKDCLQKGAFISDKDGDMHYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPSAGQRTLAAIQSAERLGLPEARIPLSQAVIELSLSPKSNSAIKAIDSALSDIRKGKVEQIPKHLRDGHYQGAKDLGRSIGYKYPHDYENGYIKQQYLPDALKNKIYYEPKTTSKSEQQFKIVYDNLNHKN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 107129 108397 . - . GCA_005502385.1_00630_mRNA GCA_005502385.1_00630 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNTEPLASRMRPTNINEIISQQHLVGPRGIIRRMVETKKLSSMIFYGPPGIGKTSIAKAIAGSTEYKFRQLNAVTNTKKDMQMIVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIILIGATTSNPYHAINPAIRSRVQIFELYPLDEKDVYQALTRALNDDQNGLKSYQPKIDEDALKYFSTQSHGDVRSALNALELAVLSAKVSNNQRHVTLEDAKDCLQKGAFISDKDGDMHYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPSAGQRTLAAIQSAERLGLPEARIPLSQAVIELSLSPKSNSAIKAIDSALSDIRKGKVEQIPKHLRDGHYQGAKDLGRSIGYKYPHDYENGYIKQQYLPDALKNKIYYEPKTTSKSEQQFKIVYDNLNHKN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 107129 108397 . - 0 GCA_005502385.1_00630 GCA_005502385.1_00630_gene,GCA_005502385.1_00630_mRNA GCA_005502385.1_00630 putative AAA domain-containing protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNTEPLASRMRPTNINEIISQQHLVGPRGIIRRMVETKKLSSMIFYGPPGIGKTSIAKAIAGSTEYKFRQLNAVTNTKKDMQMIVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIILIGATTSNPYHAINPAIRSRVQIFELYPLDEKDVYQALTRALNDDQNGLKSYQPKIDEDALKYFSTQSHGDVRSALNALELAVLSAKVSNNQRHVTLEDAKDCLQKGAFISDKDGDMHYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPSAGQRTLAAIQSAERLGLPEARIPLSQAVIELSLSPKSNSAIKAIDSALSDIRKGKVEQIPKHLRDGHYQGAKDLGRSIGYKYPHDYENGYIKQQYLPDALKNKIYYEPKTTSKSEQQFKIVYDNLNHKN persistent 422 Replication-associated recombination protein A WP_070436597.1 UPI0008A11490 UniRef100_UPI0008A11490,UniRef50_A0A1S0ZBL1,UniRef90_A0A4Q9WPV2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 108481 108903 . + . GCA_005502385.1_00631_gene GCA_005502385.1_00631 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKISTKGRYGLTLMISLAKREGQGCVSLKTIAEENHLSDLYLEQLVGPLRNAGLIRSIRGAKGGYQLRVPSEEISAGDIIRLLEGPITIVESIDSEPPAQKELWLRMRDAVREVLDNTTLKYLADFVESDNDLDGYMFYI . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 108481 108903 . + . GCA_005502385.1_00631_mRNA GCA_005502385.1_00631 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKISTKGRYGLTLMISLAKREGQGCVSLKTIAEENHLSDLYLEQLVGPLRNAGLIRSIRGAKGGYQLRVPSEEISAGDIIRLLEGPITIVESIDSEPPAQKELWLRMRDAVREVLDNTTLKYLADFVESDNDLDGYMFYI . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 108481 108903 . + 0 GCA_005502385.1_00631 GCA_005502385.1_00631_gene,GCA_005502385.1_00631_mRNA GCA_005502385.1_00631 HTH-type transcriptional regulator CymR GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKISTKGRYGLTLMISLAKREGQGCVSLKTIAEENHLSDLYLEQLVGPLRNAGLIRSIRGAKGGYQLRVPSEEISAGDIIRLLEGPITIVESIDSEPPAQKELWLRMRDAVREVLDNTTLKYLADFVESDNDLDGYMFYI persistent 140 cymR cysteine metabolism transcriptional regulator CymR COG1959,K WP_002448977.1 UPI00019FCB7F UniRef100_A0A1L8Y5Y8,UniRef50_B9E703,UniRef90_A0A2A1K8L5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 109013 109156 . + . GCA_005502385.1_00632_gene GCA_005502385.1_00632 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGFMDKAKDAAEKFKNSDNEQVNKVKDKINEYTGGNNDSKDDKKDNK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 109013 109156 . + . GCA_005502385.1_00632_mRNA GCA_005502385.1_00632 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGFMDKAKDAAEKFKNSDNEQVNKVKDKINEYTGGNNDSKDDKKDNK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 109013 109156 . + 0 GCA_005502385.1_00632 GCA_005502385.1_00632_gene,GCA_005502385.1_00632_mRNA GCA_005502385.1_00632 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGFMDKAKDAAEKFKNSDNEQVNKVKDKINEYTGGNNDSKDDKKDNK persistent 47 SAS049 family protein WP_017176172.1 UPI0002D565F9 UniRef100_A0A4Q9WQP7,UniRef50_A0A7Z0RRV6,UniRef90_A0A6N0I484 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 109255 110259 . - . GCA_005502385.1_00633_gene GCA_005502385.1_00633 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSDIKFSALNLVPIREGQTDKDAINDMVALAQKLDELDYERYWIAEHHNAPNLVSSATSLLIQHTLEHTHNIKVGSGGIMLPNHAPLVVAEQFGTLETIYPNRVDLGLGRAPGTDMMTASALRRDQHNGVYAFPEEVEQLQTYFGPGNKQAYVRAYPAVDKNVPLYILGSSTDSAHLAARKGLPYVFAGHFAPQQMKEAIEIYHDLFEPSEALDKPYMIVCLNAIVTETDKEAEYLASSLAQVFISIARGRMQPVQPPTDDLKGLLTPREYEMAKQRFDDSLIGSEETVKAKLEAFLEEYGDIDEIMVVSYIYDQDRQFESYERFKRVIQKLNK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 109255 110259 . - . GCA_005502385.1_00633_mRNA GCA_005502385.1_00633 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSDIKFSALNLVPIREGQTDKDAINDMVALAQKLDELDYERYWIAEHHNAPNLVSSATSLLIQHTLEHTHNIKVGSGGIMLPNHAPLVVAEQFGTLETIYPNRVDLGLGRAPGTDMMTASALRRDQHNGVYAFPEEVEQLQTYFGPGNKQAYVRAYPAVDKNVPLYILGSSTDSAHLAARKGLPYVFAGHFAPQQMKEAIEIYHDLFEPSEALDKPYMIVCLNAIVTETDKEAEYLASSLAQVFISIARGRMQPVQPPTDDLKGLLTPREYEMAKQRFDDSLIGSEETVKAKLEAFLEEYGDIDEIMVVSYIYDQDRQFESYERFKRVIQKLNK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 109255 110259 . - 0 GCA_005502385.1_00633 GCA_005502385.1_00633_gene,GCA_005502385.1_00633_mRNA GCA_005502385.1_00633 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSDIKFSALNLVPIREGQTDKDAINDMVALAQKLDELDYERYWIAEHHNAPNLVSSATSLLIQHTLEHTHNIKVGSGGIMLPNHAPLVVAEQFGTLETIYPNRVDLGLGRAPGTDMMTASALRRDQHNGVYAFPEEVEQLQTYFGPGNKQAYVRAYPAVDKNVPLYILGSSTDSAHLAARKGLPYVFAGHFAPQQMKEAIEIYHDLFEPSEALDKPYMIVCLNAIVTETDKEAEYLASSLAQVFISIARGRMQPVQPPTDDLKGLLTPREYEMAKQRFDDSLIGSEETVKAKLEAFLEEYGDIDEIMVVSYIYDQDRQFESYERFKRVIQKLNK persistent 334 LLM class flavin-dependent oxidoreductase WP_049382006.1 UPI00066B1C40 UniRef100_UPI00066B1C40,UniRef50_A0A0D6HHK7,UniRef90_A0A3S7GY60 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 110459 111598 . + . GCA_005502385.1_00634_gene GCA_005502385.1_00634 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEVYADYAATTPVKPEVIEAMMDIYQSHYGNPSSIHTVGRDARRYLDESRRNVAQLLGAKPSEVIFTSGATESNNTAIKGLVYANEHLGNHIITTKIEHHSVLHVFEQLEKEGYEVTYLDVDDTGKVDLDQLEEALTDDTILVSIMFVNNEVGTVEPIYDIENIVSNSNALLHVDAVQAISHLDIKFSEFNIDTMSITAHKFGGPKGVGILLVKNNTPIEYSQLGGEQETKRRAGTESVPQIVGMTKALEIATKNRDQNNIHLMQLKELFLVSLQERAIPFEVNGSMVETTGHILNLYFPFIDVETMLTLLDLANIYVSSGSACTAGSTTPSHVLAAMYEDEDRAKHSVRFSFNELTTEQDIKYIVAEIHKIYHKFKEE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 110459 111598 . + . GCA_005502385.1_00634_mRNA GCA_005502385.1_00634 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEVYADYAATTPVKPEVIEAMMDIYQSHYGNPSSIHTVGRDARRYLDESRRNVAQLLGAKPSEVIFTSGATESNNTAIKGLVYANEHLGNHIITTKIEHHSVLHVFEQLEKEGYEVTYLDVDDTGKVDLDQLEEALTDDTILVSIMFVNNEVGTVEPIYDIENIVSNSNALLHVDAVQAISHLDIKFSEFNIDTMSITAHKFGGPKGVGILLVKNNTPIEYSQLGGEQETKRRAGTESVPQIVGMTKALEIATKNRDQNNIHLMQLKELFLVSLQERAIPFEVNGSMVETTGHILNLYFPFIDVETMLTLLDLANIYVSSGSACTAGSTTPSHVLAAMYEDEDRAKHSVRFSFNELTTEQDIKYIVAEIHKIYHKFKEE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 110459 111598 . + 0 GCA_005502385.1_00634 GCA_005502385.1_00634_gene,GCA_005502385.1_00634_mRNA GCA_005502385.1_00634 Cysteine desulfurase IscS GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEVYADYAATTPVKPEVIEAMMDIYQSHYGNPSSIHTVGRDARRYLDESRRNVAQLLGAKPSEVIFTSGATESNNTAIKGLVYANEHLGNHIITTKIEHHSVLHVFEQLEKEGYEVTYLDVDDTGKVDLDQLEEALTDDTILVSIMFVNNEVGTVEPIYDIENIVSNSNALLHVDAVQAISHLDIKFSEFNIDTMSITAHKFGGPKGVGILLVKNNTPIEYSQLGGEQETKRRAGTESVPQIVGMTKALEIATKNRDQNNIHLMQLKELFLVSLQERAIPFEVNGSMVETTGHILNLYFPFIDVETMLTLLDLANIYVSSGSACTAGSTTPSHVLAAMYEDEDRAKHSVRFSFNELTTEQDIKYIVAEIHKIYHKFKEE persistent 379 Cysteine desulfurase WP_017176174.1 UPI0002FAD48A UniRef100_A0A4Q9WPV5,UniRef50_A0A391MGC8,UniRef90_A0A4Q9WPV5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 111602 112714 . + . GCA_005502385.1_00635_gene GCA_005502385.1_00635 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSNKDIRVVVGMSGGVDSSVTAYLLKEQGYDVIGIFMKNWDDTDENGVCTATEDYNDVIAVCNQIGIPYYAVNFEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLEHALKLGADYVATGHYARIRRHEDGRVEMLRGVDDNKDQTYFLNQLSQEQLSKVMFPIGDIEKKEVRKIAEEQDLATAKKKDSTGICFIGERNFKSFLSQYLPAQSGEMRTLNGKKMGIHSGLMYYTIGQRHGLGIGGDGDPWFVVGKNLEDNILYVEQGFHHDALYSDYLIASDASFVNPVDLENGFECTAKFRYRQKDTKVFVQKEDEQSIRVTFDEPVRAITPGQAVVFYNGEVCLGGATIDDVYKTTGQLSYVV . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 111602 112714 . + . GCA_005502385.1_00635_mRNA GCA_005502385.1_00635 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSNKDIRVVVGMSGGVDSSVTAYLLKEQGYDVIGIFMKNWDDTDENGVCTATEDYNDVIAVCNQIGIPYYAVNFEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLEHALKLGADYVATGHYARIRRHEDGRVEMLRGVDDNKDQTYFLNQLSQEQLSKVMFPIGDIEKKEVRKIAEEQDLATAKKKDSTGICFIGERNFKSFLSQYLPAQSGEMRTLNGKKMGIHSGLMYYTIGQRHGLGIGGDGDPWFVVGKNLEDNILYVEQGFHHDALYSDYLIASDASFVNPVDLENGFECTAKFRYRQKDTKVFVQKEDEQSIRVTFDEPVRAITPGQAVVFYNGEVCLGGATIDDVYKTTGQLSYVV . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 111602 112714 . + 0 GCA_005502385.1_00635 GCA_005502385.1_00635_gene,GCA_005502385.1_00635_mRNA GCA_005502385.1_00635 tRNA-specific 2-thiouridylase MnmA GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSNKDIRVVVGMSGGVDSSVTAYLLKEQGYDVIGIFMKNWDDTDENGVCTATEDYNDVIAVCNQIGIPYYAVNFEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLEHALKLGADYVATGHYARIRRHEDGRVEMLRGVDDNKDQTYFLNQLSQEQLSKVMFPIGDIEKKEVRKIAEEQDLATAKKKDSTGICFIGERNFKSFLSQYLPAQSGEMRTLNGKKMGIHSGLMYYTIGQRHGLGIGGDGDPWFVVGKNLEDNILYVEQGFHHDALYSDYLIASDASFVNPVDLENGFECTAKFRYRQKDTKVFVQKEDEQSIRVTFDEPVRAITPGQAVVFYNGEVCLGGATIDDVYKTTGQLSYVV persistent 370 mnmA tRNA 2-thiouridine(34) synthase MnmA 2.8.1.13 GO:0000049,GO:0002143,GO:0005524,GO:0005737,GO:0008033,GO:0016740,GO:0016783,GO:0103016 COG0482,J WP_017176175.1 UPI00030E89F2 UniRef100_A0A8X8GVI4,UniRef50_Q812R6,UniRef90_Q4L6W8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 112801 113472 . + . GCA_005502385.1_00636_gene GCA_005502385.1_00636 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIEQETIYQWMNNGNYEEAIKALFNNIEENPNIIENYINAGIILADVGEIEKAERFFQKAITLDDKNGAVYYNLANLYYEQSRFQEAIKLYQRALKYNMNPIDTNYMIGMSFSQLDAQREALPFFMTAAELDQTLDTEVQFQYGLTLCHLEMFQEAIKQLNYVLSINPNHVDALYNLGLATYMETEDADEAIQYFDKAIQIDPKHLLSQHAKQTFKSLKNEEE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 112801 113472 . + . GCA_005502385.1_00636_mRNA GCA_005502385.1_00636 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIEQETIYQWMNNGNYEEAIKALFNNIEENPNIIENYINAGIILADVGEIEKAERFFQKAITLDDKNGAVYYNLANLYYEQSRFQEAIKLYQRALKYNMNPIDTNYMIGMSFSQLDAQREALPFFMTAAELDQTLDTEVQFQYGLTLCHLEMFQEAIKQLNYVLSINPNHVDALYNLGLATYMETEDADEAIQYFDKAIQIDPKHLLSQHAKQTFKSLKNEEE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 112801 113472 . + 0 GCA_005502385.1_00636 GCA_005502385.1_00636_gene,GCA_005502385.1_00636_mRNA GCA_005502385.1_00636 TPR repeat-containing protein YrrB GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIEQETIYQWMNNGNYEEAIKALFNNIEENPNIIENYINAGIILADVGEIEKAERFFQKAITLDDKNGAVYYNLANLYYEQSRFQEAIKLYQRALKYNMNPIDTNYMIGMSFSQLDAQREALPFFMTAAELDQTLDTEVQFQYGLTLCHLEMFQEAIKQLNYVLSINPNHVDALYNLGLATYMETEDADEAIQYFDKAIQIDPKHLLSQHAKQTFKSLKNEEE persistent 223 Tetratricopeptide repeat protein WP_017176176.1 UPI0002FB2AE0 UniRef100_A0A4Q9WS27,UniRef50_A0A2A1KA84,UniRef90_A0A974QP35 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 113474 115897 . + . GCA_005502385.1_00637_gene GCA_005502385.1_00637 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSNPTLFDYSMVKGTVDTILFQNKDNFYTVLKVDSIETNELFDNLPTVVGFFPNIVEGDVYTFKGQIVQHPRYGKQLKAETFEKELPQTKDAIISYLSSDLFKGIGKKTAQNIVNTLGENAINDILTDPSVLENVPSLAKSKQKQIAEQISANQESEKIMIRLHDLGFGPKLSMAIYQFYQSETLKILENNPYQLVYDVKGIGFQKADTLARNNGIAYNDSERLKAGLLYTLEEECIKQGHTYLDENAVLEITEDMLSDKHLDETIEQEQLKHVLQTLFEEKKIILENSHVAIPSLYYSELKSVQNLYRINTYKNHFKIIEQSDLQIHIGEIEDQNNVNYAKSQQEALETAMNSKIMLLTGGPGTGKTTVIKGIVELYAEIHGLSLKYSDYQEDDYPIVLAAPTGRASKRLQESTGLEAMTIHRLIGWNQDTQPEDILENEIKAKLIIIDEMSMVDSWLFHQFLSAVPLDAQIILVGDEDQLPSVGPGQVFKDLIESKAFPRVNLTEVYRQQDGSSIIDLAHRMKHHESIDITKRYHDRSFIHCNVEQIPTVVEKVVSSAVNKGYDMSDIQVLAPMYKGSAGIKRLNQVLQNILNPKEKDTREIEFGDIKFRKGDKVLQLVNRPNDNIFNGDIGVIVGIFWAKENALNKDVLIVDFEGNEITFTRQDLLELTHAYCTSIHKSQGSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKQSLVLLGDPKAFDIALNTQGQERHTQLKTLIINYFGMSQVNIDVEENDEPINIDDTEDNNADEHITLSEETIYQINPMINMGNVSPYDFVEH . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 113474 115897 . + . GCA_005502385.1_00637_mRNA GCA_005502385.1_00637 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSNPTLFDYSMVKGTVDTILFQNKDNFYTVLKVDSIETNELFDNLPTVVGFFPNIVEGDVYTFKGQIVQHPRYGKQLKAETFEKELPQTKDAIISYLSSDLFKGIGKKTAQNIVNTLGENAINDILTDPSVLENVPSLAKSKQKQIAEQISANQESEKIMIRLHDLGFGPKLSMAIYQFYQSETLKILENNPYQLVYDVKGIGFQKADTLARNNGIAYNDSERLKAGLLYTLEEECIKQGHTYLDENAVLEITEDMLSDKHLDETIEQEQLKHVLQTLFEEKKIILENSHVAIPSLYYSELKSVQNLYRINTYKNHFKIIEQSDLQIHIGEIEDQNNVNYAKSQQEALETAMNSKIMLLTGGPGTGKTTVIKGIVELYAEIHGLSLKYSDYQEDDYPIVLAAPTGRASKRLQESTGLEAMTIHRLIGWNQDTQPEDILENEIKAKLIIIDEMSMVDSWLFHQFLSAVPLDAQIILVGDEDQLPSVGPGQVFKDLIESKAFPRVNLTEVYRQQDGSSIIDLAHRMKHHESIDITKRYHDRSFIHCNVEQIPTVVEKVVSSAVNKGYDMSDIQVLAPMYKGSAGIKRLNQVLQNILNPKEKDTREIEFGDIKFRKGDKVLQLVNRPNDNIFNGDIGVIVGIFWAKENALNKDVLIVDFEGNEITFTRQDLLELTHAYCTSIHKSQGSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKQSLVLLGDPKAFDIALNTQGQERHTQLKTLIINYFGMSQVNIDVEENDEPINIDDTEDNNADEHITLSEETIYQINPMINMGNVSPYDFVEH . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 113474 115897 . + 0 GCA_005502385.1_00637 GCA_005502385.1_00637_gene,GCA_005502385.1_00637_mRNA GCA_005502385.1_00637 ATP-dependent RecD-like DNA helicase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSNPTLFDYSMVKGTVDTILFQNKDNFYTVLKVDSIETNELFDNLPTVVGFFPNIVEGDVYTFKGQIVQHPRYGKQLKAETFEKELPQTKDAIISYLSSDLFKGIGKKTAQNIVNTLGENAINDILTDPSVLENVPSLAKSKQKQIAEQISANQESEKIMIRLHDLGFGPKLSMAIYQFYQSETLKILENNPYQLVYDVKGIGFQKADTLARNNGIAYNDSERLKAGLLYTLEEECIKQGHTYLDENAVLEITEDMLSDKHLDETIEQEQLKHVLQTLFEEKKIILENSHVAIPSLYYSELKSVQNLYRINTYKNHFKIIEQSDLQIHIGEIEDQNNVNYAKSQQEALETAMNSKIMLLTGGPGTGKTTVIKGIVELYAEIHGLSLKYSDYQEDDYPIVLAAPTGRASKRLQESTGLEAMTIHRLIGWNQDTQPEDILENEIKAKLIIIDEMSMVDSWLFHQFLSAVPLDAQIILVGDEDQLPSVGPGQVFKDLIESKAFPRVNLTEVYRQQDGSSIIDLAHRMKHHESIDITKRYHDRSFIHCNVEQIPTVVEKVVSSAVNKGYDMSDIQVLAPMYKGSAGIKRLNQVLQNILNPKEKDTREIEFGDIKFRKGDKVLQLVNRPNDNIFNGDIGVIVGIFWAKENALNKDVLIVDFEGNEITFTRQDLLELTHAYCTSIHKSQGSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKQSLVLLGDPKAFDIALNTQGQERHTQLKTLIINYFGMSQVNIDVEENDEPINIDDTEDNNADEHITLSEETIYQINPMINMGNVSPYDFVEH persistent 807 recD2 ATP-dependent RecD2 DNA helicase WP_137689462.1 UPI0010F86CC8 UniRef100_UPI0010F86CC8,UniRef50_A0A654AZ37,UniRef90_A0A3S7GXG3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 116177 118807 . + . GCA_005502385.1_00638_gene GCA_005502385.1_00638 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKLKASDIRQKYIDFFVEKGHMVEPSAPLVPIDDDSLLWINSGVATLKKYFDGRETPKKPRIVNSQKAIRTNDIENVGFTARHHTFFEMLGNFSIGDYFKKEAIEFAWEFLTSDKWMGMEPEKLYVTIHPEDVEAYRLWHEDIGLEESRIIRIEGNFWDIGEGPSGPNTEIFYDRGEAYGQNDPAEEMYPGGENERYLEVWNLVFSEYNHNKDHTYTPLPNKNIDTGMGLERMTSISQNVRTNYETDLFMPIIEEVEHISGKKYLENNEQDVAFKVIADHIRTISFAISDGALPANEGRGYVLRRLLRRAVRFSQTLGINEPFMYKLVDIVADIMEPYYPNVKEKSDFIKRVIKSEEERFHETLQEGVSILNQLITQAKESTHQINGSDAFKLYDTYGFPIELTEELASQEGITVDMATFETEMEQQRTRAREARQSSQSMQVQSDVLKNINTESQFVGYETTEYQTILTDLIYNGKTVTSAEAGETVYFILKETPFYAVSGGQVADKGTVGNDHFEIAVQEVTKAPNGQNLHQGTVQFGQVSVNSHVDATVNKEERKDIQKNHSATHLLHAALKEILGEHVNQAGSLVESERLRFDFSHFGPMTEEEIDQVERRVNEEIWKGISVHIQEMPIQEAKEMGAMALFGEKYGDIVRVVNMAPFSIELCGGIHVDNTAEIGLFKIVSESGTGAGVRRIEALTGKAAFLYFEDIQNKFNSVKEQLKVKSDKQVYDKVVQIQENEKQLNKQLEQRNKEITSLKMGNIEDQVEMINGFKVLATEVEVSNPKEIRQTMDDFKSKQQDTIIILASHVGEKVSLIAAVPKELTSQVKAGDIIKNMAPIVGGKGGGRPDMAQGGGTQPENISESLRFIKDYIKNL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 116177 118807 . + . GCA_005502385.1_00638_mRNA GCA_005502385.1_00638 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKLKASDIRQKYIDFFVEKGHMVEPSAPLVPIDDDSLLWINSGVATLKKYFDGRETPKKPRIVNSQKAIRTNDIENVGFTARHHTFFEMLGNFSIGDYFKKEAIEFAWEFLTSDKWMGMEPEKLYVTIHPEDVEAYRLWHEDIGLEESRIIRIEGNFWDIGEGPSGPNTEIFYDRGEAYGQNDPAEEMYPGGENERYLEVWNLVFSEYNHNKDHTYTPLPNKNIDTGMGLERMTSISQNVRTNYETDLFMPIIEEVEHISGKKYLENNEQDVAFKVIADHIRTISFAISDGALPANEGRGYVLRRLLRRAVRFSQTLGINEPFMYKLVDIVADIMEPYYPNVKEKSDFIKRVIKSEEERFHETLQEGVSILNQLITQAKESTHQINGSDAFKLYDTYGFPIELTEELASQEGITVDMATFETEMEQQRTRAREARQSSQSMQVQSDVLKNINTESQFVGYETTEYQTILTDLIYNGKTVTSAEAGETVYFILKETPFYAVSGGQVADKGTVGNDHFEIAVQEVTKAPNGQNLHQGTVQFGQVSVNSHVDATVNKEERKDIQKNHSATHLLHAALKEILGEHVNQAGSLVESERLRFDFSHFGPMTEEEIDQVERRVNEEIWKGISVHIQEMPIQEAKEMGAMALFGEKYGDIVRVVNMAPFSIELCGGIHVDNTAEIGLFKIVSESGTGAGVRRIEALTGKAAFLYFEDIQNKFNSVKEQLKVKSDKQVYDKVVQIQENEKQLNKQLEQRNKEITSLKMGNIEDQVEMINGFKVLATEVEVSNPKEIRQTMDDFKSKQQDTIIILASHVGEKVSLIAAVPKELTSQVKAGDIIKNMAPIVGGKGGGRPDMAQGGGTQPENISESLRFIKDYIKNL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 116177 118807 . + 0 GCA_005502385.1_00638 GCA_005502385.1_00638_gene,GCA_005502385.1_00638_mRNA GCA_005502385.1_00638 Alanine--tRNA ligase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKLKASDIRQKYIDFFVEKGHMVEPSAPLVPIDDDSLLWINSGVATLKKYFDGRETPKKPRIVNSQKAIRTNDIENVGFTARHHTFFEMLGNFSIGDYFKKEAIEFAWEFLTSDKWMGMEPEKLYVTIHPEDVEAYRLWHEDIGLEESRIIRIEGNFWDIGEGPSGPNTEIFYDRGEAYGQNDPAEEMYPGGENERYLEVWNLVFSEYNHNKDHTYTPLPNKNIDTGMGLERMTSISQNVRTNYETDLFMPIIEEVEHISGKKYLENNEQDVAFKVIADHIRTISFAISDGALPANEGRGYVLRRLLRRAVRFSQTLGINEPFMYKLVDIVADIMEPYYPNVKEKSDFIKRVIKSEEERFHETLQEGVSILNQLITQAKESTHQINGSDAFKLYDTYGFPIELTEELASQEGITVDMATFETEMEQQRTRAREARQSSQSMQVQSDVLKNINTESQFVGYETTEYQTILTDLIYNGKTVTSAEAGETVYFILKETPFYAVSGGQVADKGTVGNDHFEIAVQEVTKAPNGQNLHQGTVQFGQVSVNSHVDATVNKEERKDIQKNHSATHLLHAALKEILGEHVNQAGSLVESERLRFDFSHFGPMTEEEIDQVERRVNEEIWKGISVHIQEMPIQEAKEMGAMALFGEKYGDIVRVVNMAPFSIELCGGIHVDNTAEIGLFKIVSESGTGAGVRRIEALTGKAAFLYFEDIQNKFNSVKEQLKVKSDKQVYDKVVQIQENEKQLNKQLEQRNKEITSLKMGNIEDQVEMINGFKVLATEVEVSNPKEIRQTMDDFKSKQQDTIIILASHVGEKVSLIAAVPKELTSQVKAGDIIKNMAPIVGGKGGGRPDMAQGGGTQPENISESLRFIKDYIKNL persistent 876 alaS alanine--tRNA ligase 6.1.1.7 GO:0000166,GO:0004813,GO:0005737,GO:0006419 WP_019835422.1 UPI000361A927 UniRef100_UPI000361A927,UniRef50_Q03ER8,UniRef90_A0A380G1E1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 118872 119132 . + . GCA_005502385.1_00639_gene GCA_005502385.1_00639 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MENIDKTMKFDYDEIPKENVQTVLKNVHQTLEERGYNAVNQIVGYLLSGDPAYIPRQNDARNQIRHIDRDVIMEELVSNYLKENNK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 118872 119132 . + . GCA_005502385.1_00639_mRNA GCA_005502385.1_00639 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MENIDKTMKFDYDEIPKENVQTVLKNVHQTLEERGYNAVNQIVGYLLSGDPAYIPRQNDARNQIRHIDRDVIMEELVSNYLKENNK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 118872 119132 . + 0 GCA_005502385.1_00639 GCA_005502385.1_00639_gene,GCA_005502385.1_00639_mRNA GCA_005502385.1_00639 hypothetical protein UPF0297 protein SA1445 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MENIDKTMKFDYDEIPKENVQTVLKNVHQTLEERGYNAVNQIVGYLLSGDPAYIPRQNDARNQIRHIDRDVIMEELVSNYLKENNK persistent 86 ireB IreB family regulatory phosphoprotein COG4472,S WP_002448947.1 UPI00019FCB77 UniRef100_A0A1L8Y5Y2,UniRef50_Q4L6W4,UniRef90_Q4L6W4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 119133 119561 . + . GCA_005502385.1_00640_gene GCA_005502385.1_00640 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLSHKILGLDVGSRTVGIAISDLMGWTAQGLDTLRINEENEEFGIDRLVSIIKDNNVGSVVIGLPKNMNNSIGFRGEASLKYKELLQEALPNIEIIMWDERLSTMAAERSLLEADVSRQKRKKVIDKMAAVFILQGYLDSIQ . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 119133 119561 . + . GCA_005502385.1_00640_mRNA GCA_005502385.1_00640 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLSHKILGLDVGSRTVGIAISDLMGWTAQGLDTLRINEENEEFGIDRLVSIIKDNNVGSVVIGLPKNMNNSIGFRGEASLKYKELLQEALPNIEIIMWDERLSTMAAERSLLEADVSRQKRKKVIDKMAAVFILQGYLDSIQ . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 119133 119561 . + 0 GCA_005502385.1_00640 GCA_005502385.1_00640_gene,GCA_005502385.1_00640_mRNA GCA_005502385.1_00640 Putative pre-16S rRNA nuclease GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLSHKILGLDVGSRTVGIAISDLMGWTAQGLDTLRINEENEEFGIDRLVSIIKDNNVGSVVIGLPKNMNNSIGFRGEASLKYKELLQEALPNIEIIMWDERLSTMAAERSLLEADVSRQKRKKVIDKMAAVFILQGYLDSIQ persistent 142 ruvX Holliday junction resolvase RuvX 3.1.-.-,3.1.21.10 GO:0000967,GO:0004518,GO:0005829,GO:0006364 COG0816,JLK WP_017176179.1 UPI0002E9CA38 UniRef100_A0A4Q9WPW1,UniRef50_Q2FXW1,UniRef90_Q4L6W3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 119576 119890 . + . GCA_005502385.1_00641_gene GCA_005502385.1_00641 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEHNHNHNTELNISNEEELLTLFDENGNEVLYRKMLEFYHPEFKKEYVILAEEGAQSDDDDMIELIPMINEPDESGDGGKLVPIETDEEWDMIEEVVNTNMEE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 119576 119890 . + . GCA_005502385.1_00641_mRNA GCA_005502385.1_00641 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEHNHNHNTELNISNEEELLTLFDENGNEVLYRKMLEFYHPEFKKEYVILAEEGAQSDDDDMIELIPMINEPDESGDGGKLVPIETDEEWDMIEEVVNTNMEE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 119576 119890 . + 0 GCA_005502385.1_00641 GCA_005502385.1_00641_gene,GCA_005502385.1_00641_mRNA GCA_005502385.1_00641 hypothetical protein UPF0473 protein SA1443 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEHNHNHNTELNISNEEELLTLFDENGNEVLYRKMLEFYHPEFKKEYVILAEEGAQSDDDDMIELIPMINEPDESGDGGKLVPIETDEEWDMIEEVVNTNMEE persistent 104 yrzB UPF0473 protein SH1304 COG3906,S WP_017176180.1 UPI000305BAE6 UniRef100_A0A4Q9WTI7,UniRef50_Q2FXW2,UniRef90_Q4L6W2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 120118 120786 . + . GCA_005502385.1_00642_gene GCA_005502385.1_00642 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPIDIKREVIEVESNQSYLLNLHEQLDNNIEELRFYAEEHAVPIVDKLTLDMIKQLIRIHHSKNILEIGTAIGYSSMQFASVSPDISITTIERNENMIKQAKLNFKKFEYENQIRLIEGDALSQYDKVSNHLYDMIFIDAAKAQSQKFFEYYTPLLKKGGLVITDNVLYHGFVSDIDIVRSRNVKQMVKKVQKYNTWLMKQKNYKTNFLNMDDGLAISIKGE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 120118 120786 . + . GCA_005502385.1_00642_mRNA GCA_005502385.1_00642 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPIDIKREVIEVESNQSYLLNLHEQLDNNIEELRFYAEEHAVPIVDKLTLDMIKQLIRIHHSKNILEIGTAIGYSSMQFASVSPDISITTIERNENMIKQAKLNFKKFEYENQIRLIEGDALSQYDKVSNHLYDMIFIDAAKAQSQKFFEYYTPLLKKGGLVITDNVLYHGFVSDIDIVRSRNVKQMVKKVQKYNTWLMKQKNYKTNFLNMDDGLAISIKGE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 120118 120786 . + 0 GCA_005502385.1_00642 GCA_005502385.1_00642_gene,GCA_005502385.1_00642_mRNA GCA_005502385.1_00642 tRNA 5-hydroxyuridine methyltransferase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPIDIKREVIEVESNQSYLLNLHEQLDNNIEELRFYAEEHAVPIVDKLTLDMIKQLIRIHHSKNILEIGTAIGYSSMQFASVSPDISITTIERNENMIKQAKLNFKKFEYENQIRLIEGDALSQYDKVSNHLYDMIFIDAAKAQSQKFFEYYTPLLKKGGLVITDNVLYHGFVSDIDIVRSRNVKQMVKKVQKYNTWLMKQKNYKTNFLNMDDGLAISIKGE persistent 222 tRNA 5-hydroxyuridine methyltransferase UniRef50_A0A2A1K8K5,UniRef90_A0A8X8GQN2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 120789 121712 . + . GCA_005502385.1_00643_gene GCA_005502385.1_00643 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTELLVTPKSLNHMKTLIELGADAFVIGEQKFGLRLPGEFNREDVRKAVNLAHEHDKKVYVAVNGIFHNYHLNALENYIEFLHEIRVDRIIFGDPAVVMYVKKQDNPIPLNWDAETIVTNYFQCNYWGGKGAKRAVLARELNLDEILNIKKHANVEIEVQVHGMTCMFQSKRMLLGNYYTFQDRQMKIQRSENDQDLLLYDEERENKYPVFEDYNGTHIMSPNDICLIEELEPFFEANIDSFKIDGILQSEAYINTVTAQYREAIDLYHEDPEAYEDEKFMLIDPIEEIQPEHRPFDEGFLYKQTVY . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 120789 121712 . + . GCA_005502385.1_00643_mRNA GCA_005502385.1_00643 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTELLVTPKSLNHMKTLIELGADAFVIGEQKFGLRLPGEFNREDVRKAVNLAHEHDKKVYVAVNGIFHNYHLNALENYIEFLHEIRVDRIIFGDPAVVMYVKKQDNPIPLNWDAETIVTNYFQCNYWGGKGAKRAVLARELNLDEILNIKKHANVEIEVQVHGMTCMFQSKRMLLGNYYTFQDRQMKIQRSENDQDLLLYDEERENKYPVFEDYNGTHIMSPNDICLIEELEPFFEANIDSFKIDGILQSEAYINTVTAQYREAIDLYHEDPEAYEDEKFMLIDPIEEIQPEHRPFDEGFLYKQTVY . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 120789 121712 . + 0 GCA_005502385.1_00643 GCA_005502385.1_00643_gene,GCA_005502385.1_00643_mRNA GCA_005502385.1_00643 23S rRNA 5-hydroxycytidine synthase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTELLVTPKSLNHMKTLIELGADAFVIGEQKFGLRLPGEFNREDVRKAVNLAHEHDKKVYVAVNGIFHNYHLNALENYIEFLHEIRVDRIIFGDPAVVMYVKKQDNPIPLNWDAETIVTNYFQCNYWGGKGAKRAVLARELNLDEILNIKKHANVEIEVQVHGMTCMFQSKRMLLGNYYTFQDRQMKIQRSENDQDLLLYDEERENKYPVFEDYNGTHIMSPNDICLIEELEPFFEANIDSFKIDGILQSEAYINTVTAQYREAIDLYHEDPEAYEDEKFMLIDPIEEIQPEHRPFDEGFLYKQTVY persistent 307 Collagenase-like protease WP_017176182.1 UPI00030924B4 UniRef100_A0A4V6MZG5,UniRef50_O32035,UniRef90_A0A974KYA3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 121726 122994 . + . GCA_005502385.1_00644_gene GCA_005502385.1_00644 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKTLNEIEVNAKRKIKKPELLAPAGNLEKLKIAVHYGADAVFLGGQEYGLRSNADNFTMEEIKEGVEFANRYGAKIYVTTNIIAHDENIDGLEDYLRQLEATGATGIIVADPLIIETCKKVAPKLEIHLSTQQSLSNYKAVEYWKEEGLDRVVLARETGAMEMKEMKDNVDIEIEAFIHGAMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYDLLAVDEEGELDLFYQDGDVVPFAMSPKDLKLIESIPQMMDIGIDSLKIEGRMKSIHYIATVVSVYRKVIDAYAEDPDNFKIKPEWLIELDKCANRDTAPAFFEGTPGYEEQMFGVQQNKKSPYDFCGLVLDYDEATHIATIQQRNHFKPGQEIEFFGPEIESFKQVIDVIYDEEGNHLDAARHPLQIVQIKVDHPIYPNNMMRKEIG . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 121726 122994 . + . GCA_005502385.1_00644_mRNA GCA_005502385.1_00644 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKTLNEIEVNAKRKIKKPELLAPAGNLEKLKIAVHYGADAVFLGGQEYGLRSNADNFTMEEIKEGVEFANRYGAKIYVTTNIIAHDENIDGLEDYLRQLEATGATGIIVADPLIIETCKKVAPKLEIHLSTQQSLSNYKAVEYWKEEGLDRVVLARETGAMEMKEMKDNVDIEIEAFIHGAMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYDLLAVDEEGELDLFYQDGDVVPFAMSPKDLKLIESIPQMMDIGIDSLKIEGRMKSIHYIATVVSVYRKVIDAYAEDPDNFKIKPEWLIELDKCANRDTAPAFFEGTPGYEEQMFGVQQNKKSPYDFCGLVLDYDEATHIATIQQRNHFKPGQEIEFFGPEIESFKQVIDVIYDEEGNHLDAARHPLQIVQIKVDHPIYPNNMMRKEIG . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 121726 122994 . + 0 GCA_005502385.1_00644 GCA_005502385.1_00644_gene,GCA_005502385.1_00644_mRNA GCA_005502385.1_00644 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKTLNEIEVNAKRKIKKPELLAPAGNLEKLKIAVHYGADAVFLGGQEYGLRSNADNFTMEEIKEGVEFANRYGAKIYVTTNIIAHDENIDGLEDYLRQLEATGATGIIVADPLIIETCKKVAPKLEIHLSTQQSLSNYKAVEYWKEEGLDRVVLARETGAMEMKEMKDNVDIEIEAFIHGAMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYDLLAVDEEGELDLFYQDGDVVPFAMSPKDLKLIESIPQMMDIGIDSLKIEGRMKSIHYIATVVSVYRKVIDAYAEDPDNFKIKPEWLIELDKCANRDTAPAFFEGTPGYEEQMFGVQQNKKSPYDFCGLVLDYDEATHIATIQQRNHFKPGQEIEFFGPEIESFKQVIDVIYDEEGNHLDAARHPLQIVQIKVDHPIYPNNMMRKEIG persistent 422 Protease 3.4.-.- WP_017176183.1 UPI0003179345 UniRef100_A0A3S7GY26,UniRef50_O32034,UniRef90_A0A4U9TE72 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 122994 123617 . + . GCA_005502385.1_00645_gene GCA_005502385.1_00645 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTQTTIIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQSHLTFEERLETNYDHPFAFDNDLLISNLKDLRNGQAVEVPTYDYKNHTRSDETIAFEPKDVIIVEGIFALENKTLRDMMDVKIYVDTDADLRILRRLVRDTKERGRSMESVINQYLNVVRPMHNQFIEPTKKYADIIIPEGGSNKVAIDIMTTKIQTLVGKH . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 122994 123617 . + . GCA_005502385.1_00645_mRNA GCA_005502385.1_00645 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTQTTIIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQSHLTFEERLETNYDHPFAFDNDLLISNLKDLRNGQAVEVPTYDYKNHTRSDETIAFEPKDVIIVEGIFALENKTLRDMMDVKIYVDTDADLRILRRLVRDTKERGRSMESVINQYLNVVRPMHNQFIEPTKKYADIIIPEGGSNKVAIDIMTTKIQTLVGKH . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 122994 123617 . + 0 GCA_005502385.1_00645 GCA_005502385.1_00645_gene,GCA_005502385.1_00645_mRNA GCA_005502385.1_00645 Uridine kinase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTQTTIIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQSHLTFEERLETNYDHPFAFDNDLLISNLKDLRNGQAVEVPTYDYKNHTRSDETIAFEPKDVIIVEGIFALENKTLRDMMDVKIYVDTDADLRILRRLVRDTKERGRSMESVINQYLNVVRPMHNQFIEPTKKYADIIIPEGGSNKVAIDIMTTKIQTLVGKH persistent 207 udk uridine kinase 2.7.1.48 GO:0004849,GO:0005524,GO:0005737,GO:0043771,GO:0044206,GO:0044211 COG0572,F WP_017176184.1 UPI00031F2149 UniRef100_A0A4Q9WPV6,UniRef50_Q9KDD8,UniRef90_Q2FXW6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 123675 124151 . + . GCA_005502385.1_00646_gene GCA_005502385.1_00646 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MENQKQYPMTQEGYEKLEQELEELKTVKRPEVVEKIKVARSFGDLSENSEYDAAKDEQGFIEQDIQRIEHMLRYALIIEDNGDNNVIQIGKTVTFVELPGDEEESYQIVGSAEADAFKGKISNESPMAKALIGKSLNDEVRVPLPNGGEMKVKIVDIK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 123675 124151 . + . GCA_005502385.1_00646_mRNA GCA_005502385.1_00646 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MENQKQYPMTQEGYEKLEQELEELKTVKRPEVVEKIKVARSFGDLSENSEYDAAKDEQGFIEQDIQRIEHMLRYALIIEDNGDNNVIQIGKTVTFVELPGDEEESYQIVGSAEADAFKGKISNESPMAKALIGKSLNDEVRVPLPNGGEMKVKIVDIK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 123675 124151 . + 0 GCA_005502385.1_00646 GCA_005502385.1_00646_gene,GCA_005502385.1_00646_mRNA GCA_005502385.1_00646 Transcription elongation factor GreA GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MENQKQYPMTQEGYEKLEQELEELKTVKRPEVVEKIKVARSFGDLSENSEYDAAKDEQGFIEQDIQRIEHMLRYALIIEDNGDNNVIQIGKTVTFVELPGDEEESYQIVGSAEADAFKGKISNESPMAKALIGKSLNDEVRVPLPNGGEMKVKIVDIK persistent 158 greA transcription elongation factor GreA GO:0003677,GO:0006354,GO:0032784,GO:0070063 COG0782,K WP_017176185.1 UPI00030DE256 UniRef100_A0A4Q9WS35,UniRef50_Q2FXW7,UniRef90_Q2FXW7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 124488 125216 . + . GCA_005502385.1_00647_gene GCA_005502385.1_00647 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEIKIINEQSIALYFKEEISESNYRDVESVTKHIHAKRIDDIKDVIPSYRAIMINFDNIKLNFKQLIDILDLKQLNGEHAKDISDKTIIHIPVLYNSEVGPDLPYVAKHNKLTTDEVIQIHTQNEYLVYMLGFMPGFPFLGGLDSRLHTPRRDEPRVKIDAGSVGIANNQTGLYPSDSPGGWQIIGRTPLKVFDINDDEMSLYQAGDYIKFYSIDENTFNDIQSEIAENRFNKEKWVLNHVD . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 124488 125216 . + . GCA_005502385.1_00647_mRNA GCA_005502385.1_00647 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEIKIINEQSIALYFKEEISESNYRDVESVTKHIHAKRIDDIKDVIPSYRAIMINFDNIKLNFKQLIDILDLKQLNGEHAKDISDKTIIHIPVLYNSEVGPDLPYVAKHNKLTTDEVIQIHTQNEYLVYMLGFMPGFPFLGGLDSRLHTPRRDEPRVKIDAGSVGIANNQTGLYPSDSPGGWQIIGRTPLKVFDINDDEMSLYQAGDYIKFYSIDENTFNDIQSEIAENRFNKEKWVLNHVD . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 124488 125216 . + 0 GCA_005502385.1_00647 GCA_005502385.1_00647_gene,GCA_005502385.1_00647_mRNA GCA_005502385.1_00647 5-oxoprolinase subunit B GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEIKIINEQSIALYFKEEISESNYRDVESVTKHIHAKRIDDIKDVIPSYRAIMINFDNIKLNFKQLIDILDLKQLNGEHAKDISDKTIIHIPVLYNSEVGPDLPYVAKHNKLTTDEVIQIHTQNEYLVYMLGFMPGFPFLGGLDSRLHTPRRDEPRVKIDAGSVGIANNQTGLYPSDSPGGWQIIGRTPLKVFDINDDEMSLYQAGDYIKFYSIDENTFNDIQSEIAENRFNKEKWVLNHVD persistent 242 pxpB 5-oxoprolinase subunit PxpB 3.5.2.9 GO:0005975,GO:0008152,GO:0017168 UniRef50_A0A9X0PF13,UniRef90_A0A6N0I491 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 125206 126210 . + . GCA_005502385.1_00648_gene GCA_005502385.1_00648 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSISIIQPGMFTTVQDEGRFGFQHLGFSSAGAMDLYSYLIGKTLIGNNGPSLEYTIIGPTLQFNKDNTFILTGAHVNAKLNEETVDINTVIYACKGDILKVGAVTAGARGYIFFGHPLDIQPIAESYSTHTRSKIGGYKGRPLSKGDLIYLKENPSFKQNLGKTTVYNAIPEDNIIHIITGPQIEAFSKESINKLVNMEYKVSEKSDRMGYRLNGDHIPPKTGADIISEPVALGSIQVPNDGNPIILLNDKQTIGGYTKIATVTQLDLNKIAQFKPGDLIRFKWSTIEEATKVQEQYLNHFNHLNAEINTSPTFNMGEMRPTAKKLTKIITEER . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 125206 126210 . + . GCA_005502385.1_00648_mRNA GCA_005502385.1_00648 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSISIIQPGMFTTVQDEGRFGFQHLGFSSAGAMDLYSYLIGKTLIGNNGPSLEYTIIGPTLQFNKDNTFILTGAHVNAKLNEETVDINTVIYACKGDILKVGAVTAGARGYIFFGHPLDIQPIAESYSTHTRSKIGGYKGRPLSKGDLIYLKENPSFKQNLGKTTVYNAIPEDNIIHIITGPQIEAFSKESINKLVNMEYKVSEKSDRMGYRLNGDHIPPKTGADIISEPVALGSIQVPNDGNPIILLNDKQTIGGYTKIATVTQLDLNKIAQFKPGDLIRFKWSTIEEATKVQEQYLNHFNHLNAEINTSPTFNMGEMRPTAKKLTKIITEER . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 125206 126210 . + 0 GCA_005502385.1_00648 GCA_005502385.1_00648_gene,GCA_005502385.1_00648_mRNA GCA_005502385.1_00648 5-oxoprolinase subunit C GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSISIIQPGMFTTVQDEGRFGFQHLGFSSAGAMDLYSYLIGKTLIGNNGPSLEYTIIGPTLQFNKDNTFILTGAHVNAKLNEETVDINTVIYACKGDILKVGAVTAGARGYIFFGHPLDIQPIAESYSTHTRSKIGGYKGRPLSKGDLIYLKENPSFKQNLGKTTVYNAIPEDNIIHIITGPQIEAFSKESINKLVNMEYKVSEKSDRMGYRLNGDHIPPKTGADIISEPVALGSIQVPNDGNPIILLNDKQTIGGYTKIATVTQLDLNKIAQFKPGDLIRFKWSTIEEATKVQEQYLNHFNHLNAEINTSPTFNMGEMRPTAKKLTKIITEER persistent 334 Allophanate hydrolase WP_070436601.1 UPI0008A5AD58 UniRef100_UPI0008A5AD58,UniRef50_Q2FXW9,UniRef90_A0A3S7GXM8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 126213 126653 . + . GCA_005502385.1_00649_gene GCA_005502385.1_00649 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDIKKIEEVIKLVKSNDVKKFKYKDNKNEIELDFTEQSNNQNNSTPVIQSEGNSQDKSISENNPLNDSAKTITSPMVGTFFLQDSKELTDPIIQVGDNIKSGDVIGYVEAMKVMNEVTSDIDGEITDIVVEHGTNVEYDQVLVKVK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 126213 126653 . + . GCA_005502385.1_00649_mRNA GCA_005502385.1_00649 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDIKKIEEVIKLVKSNDVKKFKYKDNKNEIELDFTEQSNNQNNSTPVIQSEGNSQDKSISENNPLNDSAKTITSPMVGTFFLQDSKELTDPIIQVGDNIKSGDVIGYVEAMKVMNEVTSDIDGEITDIVVEHGTNVEYDQVLVKVK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 126213 126653 . + 0 GCA_005502385.1_00649 GCA_005502385.1_00649_gene,GCA_005502385.1_00649_mRNA GCA_005502385.1_00649 Biotin carboxyl carrier protein of acetyl-CoA carboxylase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDIKKIEEVIKLVKSNDVKKFKYKDNKNEIELDFTEQSNNQNNSTPVIQSEGNSQDKSISENNPLNDSAKTITSPMVGTFFLQDSKELTDPIIQVGDNIKSGDVIGYVEAMKVMNEVTSDIDGEITDIVVEHGTNVEYDQVLVKVK persistent 146 Biotin carboxyl carrier protein of acetyl-CoA carboxylase WP_017176188.1 UPI0002EB7F7D UniRef100_A0A3S7H0K7,UniRef50_A0A380FYW2,UniRef90_A0A3S7H0K7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 126668 128029 . + . GCA_005502385.1_00650_gene GCA_005502385.1_00650 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYRCLVANRGEIAVRIIRACREMGIETVAVYAKGDEKSLHVSLADQAVCIGEANPLDSYLNIERIIGAAEITGSNAIHPGYGFLSESTTFAQKVEENDIHFIGPNKKTMEMMGDKITARQTVHSAGVPVIPGSTDAVNSLEEIKELAKDIGYPLVLKAASGGGGKGIRIVKEENQLEKSLKEAKSEGQKYFNDDRVYVEAFIPVAKHVEVQVIGDGKENYVHLGERDCSVQRKNQKLIEEAPCAALSEERREKICNDAVKVAKASNYRSAGTIEFLVTEDAHYFIEMNARIQVEHTVTEMRADRDLLQAQLYLLLHNKLPFSQEDIVFNGHVIEARINAENPEKKFQPTPGKVKRLHLPQGFNIRVDSLLYAGYQVSPYYDSLVAKVIVKDSNRTSAINKLKVALDEMVIDGFTTTADFLYAVLSYPPYAKGNAEEVDIKFLEKHHIVKGVKL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 126668 128029 . + . GCA_005502385.1_00650_mRNA GCA_005502385.1_00650 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYRCLVANRGEIAVRIIRACREMGIETVAVYAKGDEKSLHVSLADQAVCIGEANPLDSYLNIERIIGAAEITGSNAIHPGYGFLSESTTFAQKVEENDIHFIGPNKKTMEMMGDKITARQTVHSAGVPVIPGSTDAVNSLEEIKELAKDIGYPLVLKAASGGGGKGIRIVKEENQLEKSLKEAKSEGQKYFNDDRVYVEAFIPVAKHVEVQVIGDGKENYVHLGERDCSVQRKNQKLIEEAPCAALSEERREKICNDAVKVAKASNYRSAGTIEFLVTEDAHYFIEMNARIQVEHTVTEMRADRDLLQAQLYLLLHNKLPFSQEDIVFNGHVIEARINAENPEKKFQPTPGKVKRLHLPQGFNIRVDSLLYAGYQVSPYYDSLVAKVIVKDSNRTSAINKLKVALDEMVIDGFTTTADFLYAVLSYPPYAKGNAEEVDIKFLEKHHIVKGVKL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 126668 128029 . + 0 GCA_005502385.1_00650 GCA_005502385.1_00650_gene,GCA_005502385.1_00650_mRNA GCA_005502385.1_00650 Biotin carboxylase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYRCLVANRGEIAVRIIRACREMGIETVAVYAKGDEKSLHVSLADQAVCIGEANPLDSYLNIERIIGAAEITGSNAIHPGYGFLSESTTFAQKVEENDIHFIGPNKKTMEMMGDKITARQTVHSAGVPVIPGSTDAVNSLEEIKELAKDIGYPLVLKAASGGGGKGIRIVKEENQLEKSLKEAKSEGQKYFNDDRVYVEAFIPVAKHVEVQVIGDGKENYVHLGERDCSVQRKNQKLIEEAPCAALSEERREKICNDAVKVAKASNYRSAGTIEFLVTEDAHYFIEMNARIQVEHTVTEMRADRDLLQAQLYLLLHNKLPFSQEDIVFNGHVIEARINAENPEKKFQPTPGKVKRLHLPQGFNIRVDSLLYAGYQVSPYYDSLVAKVIVKDSNRTSAINKLKVALDEMVIDGFTTTADFLYAVLSYPPYAKGNAEEVDIKFLEKHHIVKGVKL persistent 453 Biotin carboxylase WP_049336043.1 UPI00066DEE8F UniRef100_UPI00066DEE8F,UniRef50_A0A2T4PV93,UniRef90_A0A0U1E6Z6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 128026 128781 . + . GCA_005502385.1_00651_gene GCA_005502385.1_00651 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMKVDLNCDLGEAFGNYSFGGDKDIIPLITSANIACGFHAGDENVMNQTVKLAKKNHVSIGAHPGLPDLKGFGRRKMDISPTEVYNLIVYQLGALEGFCKVHQTRINHVKPHGALYNMGAKNKAIAKAIAKAVYDFDSAIVLVGLSNSLLISEAKAIGLKTASEVFADRRYEDNGQLVSRKEPDAVITDTDEALKQVLKMVTENKVISRNGKEIDLETDTICVHGDGKHALEFVEQIRKKLTKEGIDIQSL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 128026 128781 . + . GCA_005502385.1_00651_mRNA GCA_005502385.1_00651 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMKVDLNCDLGEAFGNYSFGGDKDIIPLITSANIACGFHAGDENVMNQTVKLAKKNHVSIGAHPGLPDLKGFGRRKMDISPTEVYNLIVYQLGALEGFCKVHQTRINHVKPHGALYNMGAKNKAIAKAIAKAVYDFDSAIVLVGLSNSLLISEAKAIGLKTASEVFADRRYEDNGQLVSRKEPDAVITDTDEALKQVLKMVTENKVISRNGKEIDLETDTICVHGDGKHALEFVEQIRKKLTKEGIDIQSL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 128026 128781 . + 0 GCA_005502385.1_00651 GCA_005502385.1_00651_gene,GCA_005502385.1_00651_mRNA GCA_005502385.1_00651 5-oxoprolinase subunit A GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMKVDLNCDLGEAFGNYSFGGDKDIIPLITSANIACGFHAGDENVMNQTVKLAKKNHVSIGAHPGLPDLKGFGRRKMDISPTEVYNLIVYQLGALEGFCKVHQTRINHVKPHGALYNMGAKNKAIAKAIAKAVYDFDSAIVLVGLSNSLLISEAKAIGLKTASEVFADRRYEDNGQLVSRKEPDAVITDTDEALKQVLKMVTENKVISRNGKEIDLETDTICVHGDGKHALEFVEQIRKKLTKEGIDIQSL persistent 251 pxpA 5-oxoprolinase subunit PxpA 3.5.2.9 GO:0003824 UniRef50_C7MLY6,UniRef90_A0A3S7GYH4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 128794 130032 . + . GCA_005502385.1_00652_gene GCA_005502385.1_00652 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKENLNQTQDKDNFKFTKSHRRLLYGSVFLMATSAIGPAFLTQTAVFTAEFYASFAFAILISILIDIGAQINIWRVLVITGLRGQEVSNKVLPGLGTLISILIAFGGLAFNIGNIAGAGLGLNAIFGLDVKWGAAITAIFAILIFVSKSGQKIMDIVSMILGVIMILVVAYVMVVSNPPYGDALVHTVAPEHPIKLILPIITLVGGTVGGYITFAGAHRILDSGMKGKEFLPFVNRSAIAGILTTGIMRTLLFLAVLGVVVTGVTLNADNPPASVFEHAIGPIGKNIFGVVIFAAAMSSVIGSAYTSATFLKTLHKSLFNKNNLIVIVFIVISTIIFLLIGKPISLLIIAGAINGWILPITLGAILIASRKKSIVGDYKHPTWMLVFGIVAVIVTIITGILSLQDLATLWKG . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 128794 130032 . + . GCA_005502385.1_00652_mRNA GCA_005502385.1_00652 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKENLNQTQDKDNFKFTKSHRRLLYGSVFLMATSAIGPAFLTQTAVFTAEFYASFAFAILISILIDIGAQINIWRVLVITGLRGQEVSNKVLPGLGTLISILIAFGGLAFNIGNIAGAGLGLNAIFGLDVKWGAAITAIFAILIFVSKSGQKIMDIVSMILGVIMILVVAYVMVVSNPPYGDALVHTVAPEHPIKLILPIITLVGGTVGGYITFAGAHRILDSGMKGKEFLPFVNRSAIAGILTTGIMRTLLFLAVLGVVVTGVTLNADNPPASVFEHAIGPIGKNIFGVVIFAAAMSSVIGSAYTSATFLKTLHKSLFNKNNLIVIVFIVISTIIFLLIGKPISLLIIAGAINGWILPITLGAILIASRKKSIVGDYKHPTWMLVFGIVAVIVTIITGILSLQDLATLWKG . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 128794 130032 . + 0 GCA_005502385.1_00652 GCA_005502385.1_00652_gene,GCA_005502385.1_00652_mRNA GCA_005502385.1_00652 Divalent metal cation transporter MntH GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKENLNQTQDKDNFKFTKSHRRLLYGSVFLMATSAIGPAFLTQTAVFTAEFYASFAFAILISILIDIGAQINIWRVLVITGLRGQEVSNKVLPGLGTLISILIAFGGLAFNIGNIAGAGLGLNAIFGLDVKWGAAITAIFAILIFVSKSGQKIMDIVSMILGVIMILVVAYVMVVSNPPYGDALVHTVAPEHPIKLILPIITLVGGTVGGYITFAGAHRILDSGMKGKEFLPFVNRSAIAGILTTGIMRTLLFLAVLGVVVTGVTLNADNPPASVFEHAIGPIGKNIFGVVIFAAAMSSVIGSAYTSATFLKTLHKSLFNKNNLIVIVFIVISTIIFLLIGKPISLLIIAGAINGWILPITLGAILIASRKKSIVGDYKHPTWMLVFGIVAVIVTIITGILSLQDLATLWKG persistent 412 mntH Divalent metal cation transporter COG1914,P WP_115344895.1 UPI000DFBC5B9 UniRef100_UPI000DFBC5B9,UniRef50_Q5HNU7,UniRef90_A0A2A1K8J5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 130209 130895 . + . GCA_005502385.1_00653_gene GCA_005502385.1_00653 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIGIIGAMEEEVAILKHKLVNLNEIEVAHVKFYRGQLNDKDVVLTQSGIGKVNAAISTTLLIEKFKPTLIINTGSAGALDDSLSVGDILISNHVMYHDADATAFGYDIGQIPQMPAQFEANQQLLQLTEKVVKQQNLTAKIGQIVSGDSFIGSSEQRLKIKRQFSEAMAVEMEATAIAQTCYQFNLPFIVTRAVSDLANGKAEMSFEEFLGKAAQSSSNIVEQLVKEI . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 130209 130895 . + . GCA_005502385.1_00653_mRNA GCA_005502385.1_00653 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIGIIGAMEEEVAILKHKLVNLNEIEVAHVKFYRGQLNDKDVVLTQSGIGKVNAAISTTLLIEKFKPTLIINTGSAGALDDSLSVGDILISNHVMYHDADATAFGYDIGQIPQMPAQFEANQQLLQLTEKVVKQQNLTAKIGQIVSGDSFIGSSEQRLKIKRQFSEAMAVEMEATAIAQTCYQFNLPFIVTRAVSDLANGKAEMSFEEFLGKAAQSSSNIVEQLVKEI . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 130209 130895 . + 0 GCA_005502385.1_00653 GCA_005502385.1_00653_gene,GCA_005502385.1_00653_mRNA GCA_005502385.1_00653 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIGIIGAMEEEVAILKHKLVNLNEIEVAHVKFYRGQLNDKDVVLTQSGIGKVNAAISTTLLIEKFKPTLIINTGSAGALDDSLSVGDILISNHVMYHDADATAFGYDIGQIPQMPAQFEANQQLLQLTEKVVKQQNLTAKIGQIVSGDSFIGSSEQRLKIKRQFSEAMAVEMEATAIAQTCYQFNLPFIVTRAVSDLANGKAEMSFEEFLGKAAQSSSNIVEQLVKEI persistent 228 5'-methylthioadenosine/adenosylhomocysteine nucleosidase 3.2.2.9 GO:0008782,GO:0008930,GO:0009116,GO:0009164,GO:0019509 WP_049336047.1 UPI00066D84E3 UniRef100_UPI00066D84E3,UniRef50_Q4L6V0,UniRef90_A0A974L1I0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 130923 131450 . + . GCA_005502385.1_00654_gene GCA_005502385.1_00654 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGLIKKYFMPSDYVQSVFQIDIEKLANSGFKGIITDLDNTLVGWDVKTPTKEIQEWFKKANDLGLTITIVSNNSEKRVSGFSKDLDVDFIFKARKPMGRAFKKAIQHMNIKPEETVVIGDQMLTDVLGGNNNGLYTIMVVPVKKTDGFLTRLNRIIERRLLNYFKRKGYITWEEN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 130923 131450 . + . GCA_005502385.1_00654_mRNA GCA_005502385.1_00654 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGLIKKYFMPSDYVQSVFQIDIEKLANSGFKGIITDLDNTLVGWDVKTPTKEIQEWFKKANDLGLTITIVSNNSEKRVSGFSKDLDVDFIFKARKPMGRAFKKAIQHMNIKPEETVVIGDQMLTDVLGGNNNGLYTIMVVPVKKTDGFLTRLNRIIERRLLNYFKRKGYITWEEN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 130923 131450 . + 0 GCA_005502385.1_00654 GCA_005502385.1_00654_gene,GCA_005502385.1_00654_mRNA GCA_005502385.1_00654 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGLIKKYFMPSDYVQSVFQIDIEKLANSGFKGIITDLDNTLVGWDVKTPTKEIQEWFKKANDLGLTITIVSNNSEKRVSGFSKDLDVDFIFKARKPMGRAFKKAIQHMNIKPEETVVIGDQMLTDVLGGNNNGLYTIMVVPVKKTDGFLTRLNRIIERRLLNYFKRKGYITWEEN persistent 175 yqeG YqeG family HAD IIIA-type phosphatase WP_002449847.1 UPI00019FAB6A UniRef100_A0A974L169,UniRef50_A0A511WLT8,UniRef90_A0AAE5JNS4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 131451 132551 . + . GCA_005502385.1_00655_gene GCA_005502385.1_00655 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDETLKCIGCGAPLQSEDKNAPGYVPEHNLFRDDVICQRCFRLKNYNEIQDVGMDSEDFLNLLNGLSDRQGIIVNVIDVFDFEGSFINALKRIVGNKKIILAANKLDLLPRQINQRRVKEWLKRTARKYGLEAEEVVLISAHKGWGIDALLESINRFRNHQDVYIVGTTNVGKSTLINKLIEQSVGEKDVVTTSRFPGTTLDMIDIPLDEKTFMYDTPGIIQAHQMTHYVTEKELKVIIPKNEIKQRVFQLNEGQTLFFGGLARIDYVSGGKRPLVCYFSNDLNIHRTKTEKANDLWRNQIGHLLSPPSNPEKFNISDMKAVRLETGKEKRDIMISGLGFITLEAGAKVIVRVPKSVDVVLRQSIM . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 131451 132551 . + . GCA_005502385.1_00655_mRNA GCA_005502385.1_00655 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDETLKCIGCGAPLQSEDKNAPGYVPEHNLFRDDVICQRCFRLKNYNEIQDVGMDSEDFLNLLNGLSDRQGIIVNVIDVFDFEGSFINALKRIVGNKKIILAANKLDLLPRQINQRRVKEWLKRTARKYGLEAEEVVLISAHKGWGIDALLESINRFRNHQDVYIVGTTNVGKSTLINKLIEQSVGEKDVVTTSRFPGTTLDMIDIPLDEKTFMYDTPGIIQAHQMTHYVTEKELKVIIPKNEIKQRVFQLNEGQTLFFGGLARIDYVSGGKRPLVCYFSNDLNIHRTKTEKANDLWRNQIGHLLSPPSNPEKFNISDMKAVRLETGKEKRDIMISGLGFITLEAGAKVIVRVPKSVDVVLRQSIM . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 131451 132551 . + 0 GCA_005502385.1_00655 GCA_005502385.1_00655_gene,GCA_005502385.1_00655_mRNA GCA_005502385.1_00655 putative protein YqeH GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDETLKCIGCGAPLQSEDKNAPGYVPEHNLFRDDVICQRCFRLKNYNEIQDVGMDSEDFLNLLNGLSDRQGIIVNVIDVFDFEGSFINALKRIVGNKKIILAANKLDLLPRQINQRRVKEWLKRTARKYGLEAEEVVLISAHKGWGIDALLESINRFRNHQDVYIVGTTNVGKSTLINKLIEQSVGEKDVVTTSRFPGTTLDMIDIPLDEKTFMYDTPGIIQAHQMTHYVTEKELKVIIPKNEIKQRVFQLNEGQTLFFGGLARIDYVSGGKRPLVCYFSNDLNIHRTKTEKANDLWRNQIGHLLSPPSNPEKFNISDMKAVRLETGKEKRDIMISGLGFITLEAGAKVIVRVPKSVDVVLRQSIM persistent 366 yqeH ribosome biogenesis GTPase YqeH GO:0003924,GO:0005525,GO:0005737,GO:0042254 WP_070672184.1 UPI0008A13CD7 UniRef100_UPI0008A13CD7,UniRef50_P54453,UniRef90_A0A8X8KHQ2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 132564 133370 . + . GCA_005502385.1_00656_gene GCA_005502385.1_00656 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKFAVIGDPISHSLSPVMHNTNFKVLGLNDTYEALHIPIQDFDNIKEIITEKNLSGFNITIPHKERIIPFLDDIDEQAKAVGAVNTVKIEGNKWIGYNTDGLGYVKGLKQVYPDLSNAYILILGAGGASKGIATALSQCVQPKLTIANRTMSRFDNWKLDINAITLQQAEQYLDEFDIIINTTSAGLDNNKESVIRLDQLSPNTLVSDIIYIPYKTSFLQQAEEKGNPIYNGLDMFVYQGAESFKIWTGKDAEIKEMKLAVLNQLKGE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 132564 133370 . + . GCA_005502385.1_00656_mRNA GCA_005502385.1_00656 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKFAVIGDPISHSLSPVMHNTNFKVLGLNDTYEALHIPIQDFDNIKEIITEKNLSGFNITIPHKERIIPFLDDIDEQAKAVGAVNTVKIEGNKWIGYNTDGLGYVKGLKQVYPDLSNAYILILGAGGASKGIATALSQCVQPKLTIANRTMSRFDNWKLDINAITLQQAEQYLDEFDIIINTTSAGLDNNKESVIRLDQLSPNTLVSDIIYIPYKTSFLQQAEEKGNPIYNGLDMFVYQGAESFKIWTGKDAEIKEMKLAVLNQLKGE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 132564 133370 . + 0 GCA_005502385.1_00656 GCA_005502385.1_00656_gene,GCA_005502385.1_00656_mRNA GCA_005502385.1_00656 Shikimate dehydrogenase (NADP(+)) GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKFAVIGDPISHSLSPVMHNTNFKVLGLNDTYEALHIPIQDFDNIKEIITEKNLSGFNITIPHKERIIPFLDDIDEQAKAVGAVNTVKIEGNKWIGYNTDGLGYVKGLKQVYPDLSNAYILILGAGGASKGIATALSQCVQPKLTIANRTMSRFDNWKLDINAITLQQAEQYLDEFDIIINTTSAGLDNNKESVIRLDQLSPNTLVSDIIYIPYKTSFLQQAEEKGNPIYNGLDMFVYQGAESFKIWTGKDAEIKEMKLAVLNQLKGE persistent 268 Shikimate dehydrogenase (NADP(+)) WP_137689464.1 UPI0010F43C71 UniRef100_UPI0010F43C71,UniRef50_Q5HNV1,UniRef90_A0A3S7H044 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 133377 133667 . + . GCA_005502385.1_00657_gene GCA_005502385.1_00657 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLTGKQKRYLRSLAHNIDPIFQIGKAGINDNMISQIDETLENRELIKIHILQNNFDDKNDLAQTLSQATNSEVVQVIGSMIVIYRESQENKEISLP . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 133377 133667 . + . GCA_005502385.1_00657_mRNA GCA_005502385.1_00657 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLTGKQKRYLRSLAHNIDPIFQIGKAGINDNMISQIDETLENRELIKIHILQNNFDDKNDLAQTLSQATNSEVVQVIGSMIVIYRESQENKEISLP . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 133377 133667 . + 0 GCA_005502385.1_00657 GCA_005502385.1_00657_gene,GCA_005502385.1_00657_mRNA GCA_005502385.1_00657 RNA-binding protein YhbY GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLTGKQKRYLRSLAHNIDPIFQIGKAGINDNMISQIDETLENRELIKIHILQNNFDDKNDLAQTLSQATNSEVVQVIGSMIVIYRESQENKEISLP persistent 96 yhbY ribosome assembly RNA-binding protein YhbY GO:0003723 WP_002449800.1 UPI00019FAB67 UniRef100_A0A657ZV78,UniRef50_Q4L6U6,UniRef90_A0A657ZV78 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 133672 134241 . + . GCA_005502385.1_00658_gene GCA_005502385.1_00658 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKIVLYGGQFNPIHTAHMLVANEVFHKIKPDVFYFLPSYMAPLKEHNDYLDAHYRIKMINMVIEQLGFGNICYAELERKGQSYTYDTLKALIDQNPYDKFYFVIGSDQYDQLDKWYKIDELKQMIIFIVVNREKNIQKVDENMISISIPRMDISSSMIRQRVKDKKTIDILVPRNVSKYIREEGFYEH . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 133672 134241 . + . GCA_005502385.1_00658_mRNA GCA_005502385.1_00658 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKIVLYGGQFNPIHTAHMLVANEVFHKIKPDVFYFLPSYMAPLKEHNDYLDAHYRIKMINMVIEQLGFGNICYAELERKGQSYTYDTLKALIDQNPYDKFYFVIGSDQYDQLDKWYKIDELKQMIIFIVVNREKNIQKVDENMISISIPRMDISSSMIRQRVKDKKTIDILVPRNVSKYIREEGFYEH . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 133672 134241 . + 0 GCA_005502385.1_00658 GCA_005502385.1_00658_gene,GCA_005502385.1_00658_mRNA GCA_005502385.1_00658 putative nicotinate-nucleotide adenylyltransferase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKIVLYGGQFNPIHTAHMLVANEVFHKIKPDVFYFLPSYMAPLKEHNDYLDAHYRIKMINMVIEQLGFGNICYAELERKGQSYTYDTLKALIDQNPYDKFYFVIGSDQYDQLDKWYKIDELKQMIIFIVVNREKNIQKVDENMISISIPRMDISSSMIRQRVKDKKTIDILVPRNVSKYIREEGFYEH persistent 189 nicotinate-nucleotide adenylyltransferase 2.7.7.18 GO:0009435,GO:0016779 WP_002449696.1 UPI00019FAB66 UniRef100_A0A8X8GGR4,UniRef50_Q2FXY3,UniRef90_A0A6N0I4C6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 134231 134815 . + . GCA_005502385.1_00659_gene GCA_005502385.1_00659 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNTKEAKKLIENKLPEKRFKHSLRVADTAVKLAEIYDGDKNKAELAGILHDYCKYDDLGKMYQVVRQHDLDSNLLSYGSEILHGPVCAALMKADYGIEDEETLLAIKYHTTGRKEMTKTEKLVFIADYIEPGRKTPGVEEIRDMAYNQGSLDKTIYEISKRTVLFLISKDITVYGSTIECLNYYNYSDQKIKDD . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 134231 134815 . + . GCA_005502385.1_00659_mRNA GCA_005502385.1_00659 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNTKEAKKLIENKLPEKRFKHSLRVADTAVKLAEIYDGDKNKAELAGILHDYCKYDDLGKMYQVVRQHDLDSNLLSYGSEILHGPVCAALMKADYGIEDEETLLAIKYHTTGRKEMTKTEKLVFIADYIEPGRKTPGVEEIRDMAYNQGSLDKTIYEISKRTVLFLISKDITVYGSTIECLNYYNYSDQKIKDD . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 134231 134815 . + 0 GCA_005502385.1_00659 GCA_005502385.1_00659_gene,GCA_005502385.1_00659_mRNA GCA_005502385.1_00659 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNTKEAKKLIENKLPEKRFKHSLRVADTAVKLAEIYDGDKNKAELAGILHDYCKYDDLGKMYQVVRQHDLDSNLLSYGSEILHGPVCAALMKADYGIEDEETLLAIKYHTTGRKEMTKTEKLVFIADYIEPGRKTPGVEEIRDMAYNQGSLDKTIYEISKRTVLFLISKDITVYGSTIECLNYYNYSDQKIKDD persistent 194 yqeK bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK 3.6.1.41 UniRef50_A0A143P804,UniRef90_A0A3S7GXN9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 134816 135169 . + . GCA_005502385.1_00660_gene GCA_005502385.1_00660 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNSEELLNIAVTATEDKKAEDIVSLNMQGISDMTDYFVVCHGNNERQVQSIARAVKEKVHENNIEVKRMEGYQSARWVLIDLADVVVHIFHKDERNYYNIEKLYQDAPIESYNQVAY . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 134816 135169 . + . GCA_005502385.1_00660_mRNA GCA_005502385.1_00660 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNSEELLNIAVTATEDKKAEDIVSLNMQGISDMTDYFVVCHGNNERQVQSIARAVKEKVHENNIEVKRMEGYQSARWVLIDLADVVVHIFHKDERNYYNIEKLYQDAPIESYNQVAY . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 134816 135169 . + 0 GCA_005502385.1_00660 GCA_005502385.1_00660_gene,GCA_005502385.1_00660_mRNA GCA_005502385.1_00660 Ribosomal silencing factor RsfS GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNSEELLNIAVTATEDKKAEDIVSLNMQGISDMTDYFVVCHGNNERQVQSIARAVKEKVHENNIEVKRMEGYQSARWVLIDLADVVVHIFHKDERNYYNIEKLYQDAPIESYNQVAY persistent 117 rsfS ribosome silencing factor GO:0017148,GO:0043022 WP_002449779.1 UPI00019FAB64 UniRef100_A0A1L8Y613,UniRef50_Q9KD89,UniRef90_A0A1L8Y613 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 135171 135902 . + . GCA_005502385.1_00661_gene GCA_005502385.1_00661 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMQYTEMSKVYDQLTQDQPYEEWFNIVKYYTRTMSSNDSINILDIGCGTGSLTQLLPSIGTVTGMDLSTDMLSIAANKSNQVTWLEGDMTDFSLNTTYDVVTIFCDSLNYLPDIDDIVNTFNCVFNHLSDLGMFIFDIHTIYKMNTAFNNQCYIDDNDDIFLAWEAIKGEEPYSVYHDMSFFLKQHNGNYHRFNESHYQRTFEKDFYIRLLKQTGFNRIETFVDFDINNHNEKGDRLFFVAYK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 135171 135902 . + . GCA_005502385.1_00661_mRNA GCA_005502385.1_00661 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMQYTEMSKVYDQLTQDQPYEEWFNIVKYYTRTMSSNDSINILDIGCGTGSLTQLLPSIGTVTGMDLSTDMLSIAANKSNQVTWLEGDMTDFSLNTTYDVVTIFCDSLNYLPDIDDIVNTFNCVFNHLSDLGMFIFDIHTIYKMNTAFNNQCYIDDNDDIFLAWEAIKGEEPYSVYHDMSFFLKQHNGNYHRFNESHYQRTFEKDFYIRLLKQTGFNRIETFVDFDINNHNEKGDRLFFVAYK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 135171 135902 . + 0 GCA_005502385.1_00661 GCA_005502385.1_00661_gene,GCA_005502385.1_00661_mRNA GCA_005502385.1_00661 Trans-aconitate 2-methyltransferase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMQYTEMSKVYDQLTQDQPYEEWFNIVKYYTRTMSSNDSINILDIGCGTGSLTQLLPSIGTVTGMDLSTDMLSIAANKSNQVTWLEGDMTDFSLNTTYDVVTIFCDSLNYLPDIDDIVNTFNCVFNHLSDLGMFIFDIHTIYKMNTAFNNQCYIDDNDDIFLAWEAIKGEEPYSVYHDMSFFLKQHNGNYHRFNESHYQRTFEKDFYIRLLKQTGFNRIETFVDFDINNHNEKGDRLFFVAYK persistent 243 Class I SAM-dependent methyltransferase WP_017176198.1 UPI0002E3105B UniRef100_A0A8X8GJB0,UniRef50_B9DNI4,UniRef90_A0A974L1E2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 135955 136617 . + . GCA_005502385.1_00662_gene GCA_005502385.1_00662 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFKYRNEIIQLLTKWKTHIIILIAVVLLFIVILMLMKNNEPSEYMTTSNANNSQFNNNEKYNKNKNDNNLSTSSKENSTIYVDVKGAVKLPDVYEMKKNDRVKDVLKKAKVSENADITKINLSEKLTDQKMIYIPNKNETKINATPTNQSDLNTSESIKVNLNTANERELLNVPGIGPTKVKEIIKYREEKGQFNKVEDLKQVRGIGGKTFEKLKDYFTT . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 135955 136617 . + . GCA_005502385.1_00662_mRNA GCA_005502385.1_00662 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFKYRNEIIQLLTKWKTHIIILIAVVLLFIVILMLMKNNEPSEYMTTSNANNSQFNNNEKYNKNKNDNNLSTSSKENSTIYVDVKGAVKLPDVYEMKKNDRVKDVLKKAKVSENADITKINLSEKLTDQKMIYIPNKNETKINATPTNQSDLNTSESIKVNLNTANERELLNVPGIGPTKVKEIIKYREEKGQFNKVEDLKQVRGIGGKTFEKLKDYFTT . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 135955 136617 . + 0 GCA_005502385.1_00662 GCA_005502385.1_00662_gene,GCA_005502385.1_00662_mRNA GCA_005502385.1_00662 ComE operon protein 1 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFKYRNEIIQLLTKWKTHIIILIAVVLLFIVILMLMKNNEPSEYMTTSNANNSQFNNNEKYNKNKNDNNLSTSSKENSTIYVDVKGAVKLPDVYEMKKNDRVKDVLKKAKVSENADITKINLSEKLTDQKMIYIPNKNETKINATPTNQSDLNTSESIKVNLNTANERELLNVPGIGPTKVKEIIKYREEKGQFNKVEDLKQVRGIGGKTFEKLKDYFTT persistent 220 Competence protein ComEA WP_017176199.1 UPI0002DC2145 UniRef100_A0A3S7GY27,UniRef50_A0A2K4DJL5,UniRef90_A0A3S7GY27 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 136684 137148 . + . GCA_005502385.1_00663_gene GCA_005502385.1_00663 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDRIKWDEYFMAQSHLLALRSTCQRLSVGATIVKDNRIIAGGYNGSVAGEVHCIDVGCLIEDGHCIRTIHAEMNALLQCAKQGVSSDNATIYVTHFPCLNCTKSIIQAGIKKIYYAKDYHNHKYAIKLLNQAGIEYEKIPFSANKIAEFLTKEC . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 136684 137148 . + . GCA_005502385.1_00663_mRNA GCA_005502385.1_00663 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDRIKWDEYFMAQSHLLALRSTCQRLSVGATIVKDNRIIAGGYNGSVAGEVHCIDVGCLIEDGHCIRTIHAEMNALLQCAKQGVSSDNATIYVTHFPCLNCTKSIIQAGIKKIYYAKDYHNHKYAIKLLNQAGIEYEKIPFSANKIAEFLTKEC . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 136684 137148 . + 0 GCA_005502385.1_00663 GCA_005502385.1_00663_gene,GCA_005502385.1_00663_mRNA GCA_005502385.1_00663 tRNA-specific adenosine deaminase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDRIKWDEYFMAQSHLLALRSTCQRLSVGATIVKDNRIIAGGYNGSVAGEVHCIDVGCLIEDGHCIRTIHAEMNALLQCAKQGVSSDNATIYVTHFPCLNCTKSIIQAGIKKIYYAKDYHNHKYAIKLLNQAGIEYEKIPFSANKIAEFLTKEC persistent 154 comE ComE operon protein 2 WP_017176200.1 UPI0002DC15F7 UniRef100_A0A2A1MG46,UniRef50_A0A1W7ACC4,UniRef90_A0A2A1MG46 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 137142 139331 . + . GCA_005502385.1_00664_gene GCA_005502385.1_00664 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLVVLYALSFLSGILWVHLKLFSILIFAIILIIVYRKSIPLYHYLLILSFFFLALFQVHHTLKTNHFILQNLKVHSNINSKVTFQNDIKQFNQIIKGQFQYKHNNYHFTFKSPQLKAKDLKNRECKINGNITNSIHNEVYVYIDQIDNKHCTKVNHISFIDKHLNYIQNKLYHSSLKYPERVLALITGDTSAIDTDYLDKVKAIGIYHLLAVSGSHVATIIFIIQYSLVRFNIPKLFIRIFIIMILILFIFYTNFAPSAIRAVLTAITFFIIPKTFKISSISVLSLVFLFMTIWNMNFAYDIGFQFSFIISFFILFSKPLFNNQSILKNYIYITIIAQFSSMIISIYHFNQFQWIGFISNVIFVPLYSFIIFPLSIVLFTFYHFFSDLRCINMVANQLFELHDRIMHPFILFRNYQINIADQSNLSLLYCFILLTLLTIFICYKNYRAFLIIIILFIIFIRLTNQPLATTFTALNVGQGDSFLFQTKNNETVMVDTGGKVVQTKIKDNHNIAKYHIMPTLKSRGISKIDHLILTHPHNDHIGEFPYLAQNIRIKNLYLYIKSYSVDQIKTIHTFCSIYHIKVIDVLETNNIQLKEAKISFLNAFIDSNEDKNAQSIISLIEYKNYKLLLMGDAIEENENLLLKKYHLPLIDVLKVGHHGSKTSSSKHFLEIIQPKISMISSGKNNTFHLPNNETIDKLEKINSHIYNTQTDGEITLNLDNQLISSFNRS . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 137142 139331 . + . GCA_005502385.1_00664_mRNA GCA_005502385.1_00664 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLVVLYALSFLSGILWVHLKLFSILIFAIILIIVYRKSIPLYHYLLILSFFFLALFQVHHTLKTNHFILQNLKVHSNINSKVTFQNDIKQFNQIIKGQFQYKHNNYHFTFKSPQLKAKDLKNRECKINGNITNSIHNEVYVYIDQIDNKHCTKVNHISFIDKHLNYIQNKLYHSSLKYPERVLALITGDTSAIDTDYLDKVKAIGIYHLLAVSGSHVATIIFIIQYSLVRFNIPKLFIRIFIIMILILFIFYTNFAPSAIRAVLTAITFFIIPKTFKISSISVLSLVFLFMTIWNMNFAYDIGFQFSFIISFFILFSKPLFNNQSILKNYIYITIIAQFSSMIISIYHFNQFQWIGFISNVIFVPLYSFIIFPLSIVLFTFYHFFSDLRCINMVANQLFELHDRIMHPFILFRNYQINIADQSNLSLLYCFILLTLLTIFICYKNYRAFLIIIILFIIFIRLTNQPLATTFTALNVGQGDSFLFQTKNNETVMVDTGGKVVQTKIKDNHNIAKYHIMPTLKSRGISKIDHLILTHPHNDHIGEFPYLAQNIRIKNLYLYIKSYSVDQIKTIHTFCSIYHIKVIDVLETNNIQLKEAKISFLNAFIDSNEDKNAQSIISLIEYKNYKLLLMGDAIEENENLLLKKYHLPLIDVLKVGHHGSKTSSSKHFLEIIQPKISMISSGKNNTFHLPNNETIDKLEKINSHIYNTQTDGEITLNLDNQLISSFNRS . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 137142 139331 . + 0 GCA_005502385.1_00664 GCA_005502385.1_00664_gene,GCA_005502385.1_00664_mRNA GCA_005502385.1_00664 hypothetical protein """""" GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLVVLYALSFLSGILWVHLKLFSILIFAIILIIVYRKSIPLYHYLLILSFFFLALFQVHHTLKTNHFILQNLKVHSNINSKVTFQNDIKQFNQIIKGQFQYKHNNYHFTFKSPQLKAKDLKNRECKINGNITNSIHNEVYVYIDQIDNKHCTKVNHISFIDKHLNYIQNKLYHSSLKYPERVLALITGDTSAIDTDYLDKVKAIGIYHLLAVSGSHVATIIFIIQYSLVRFNIPKLFIRIFIIMILILFIFYTNFAPSAIRAVLTAITFFIIPKTFKISSISVLSLVFLFMTIWNMNFAYDIGFQFSFIISFFILFSKPLFNNQSILKNYIYITIIAQFSSMIISIYHFNQFQWIGFISNVIFVPLYSFIIFPLSIVLFTFYHFFSDLRCINMVANQLFELHDRIMHPFILFRNYQINIADQSNLSLLYCFILLTLLTIFICYKNYRAFLIIIILFIIFIRLTNQPLATTFTALNVGQGDSFLFQTKNNETVMVDTGGKVVQTKIKDNHNIAKYHIMPTLKSRGISKIDHLILTHPHNDHIGEFPYLAQNIRIKNLYLYIKSYSVDQIKTIHTFCSIYHIKVIDVLETNNIQLKEAKISFLNAFIDSNEDKNAQSIISLIEYKNYKLLLMGDAIEENENLLLKKYHLPLIDVLKVGHHGSKTSSSKHFLEIIQPKISMISSGKNNTFHLPNNETIDKLEKINSHIYNTQTDGEITLNLDNQLISSFNRS persistent 729 DNA internalization-related competence protein ComEC/Rec2 GO:0005215,GO:0009290,GO:0016020 WP_048682339.1 UPI00065FF094 UniRef100_UPI00065FF094,UniRef50_Q4L6T9,UniRef90_A0A8X8KHP1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 139402 140376 . + . GCA_005502385.1_00665_gene GCA_005502385.1_00665 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MANNIMAIYGEVPELVEKKSNEIVESYLNEKKDDFNYVKYNLYDTSFNQIIEEALTMPFISEKKAIVVKNAFIFTGEKVSKDIQPNNEQVNEFLEKYDGENFIIFEVYQNKLDERKKITKTLKKTSKLTKVEQMSEQEIKKWIKNKLHENFKDIKQDALDLFIELTGINFNIVSQELEKIILFLGERPTINKKDVEEIINRSLEQNVFLLTEYIQKGEKYKAIQLIKDLIVMKEEPIKLLALITSNYRLYYQCKILSRKGYSGQQIAKTINVHPYRVKLALNQVKHYQLTHLLNIIDQCAETDYKLKSSYMDKQLILELFILSL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 139402 140376 . + . GCA_005502385.1_00665_mRNA GCA_005502385.1_00665 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MANNIMAIYGEVPELVEKKSNEIVESYLNEKKDDFNYVKYNLYDTSFNQIIEEALTMPFISEKKAIVVKNAFIFTGEKVSKDIQPNNEQVNEFLEKYDGENFIIFEVYQNKLDERKKITKTLKKTSKLTKVEQMSEQEIKKWIKNKLHENFKDIKQDALDLFIELTGINFNIVSQELEKIILFLGERPTINKKDVEEIINRSLEQNVFLLTEYIQKGEKYKAIQLIKDLIVMKEEPIKLLALITSNYRLYYQCKILSRKGYSGQQIAKTINVHPYRVKLALNQVKHYQLTHLLNIIDQCAETDYKLKSSYMDKQLILELFILSL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 139402 140376 . + 0 GCA_005502385.1_00665 GCA_005502385.1_00665_gene,GCA_005502385.1_00665_mRNA GCA_005502385.1_00665 putative protein YqeN GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MANNIMAIYGEVPELVEKKSNEIVESYLNEKKDDFNYVKYNLYDTSFNQIIEEALTMPFISEKKAIVVKNAFIFTGEKVSKDIQPNNEQVNEFLEKYDGENFIIFEVYQNKLDERKKITKTLKKTSKLTKVEQMSEQEIKKWIKNKLHENFKDIKQDALDLFIELTGINFNIVSQELEKIILFLGERPTINKKDVEEIINRSLEQNVFLLTEYIQKGEKYKAIQLIKDLIVMKEEPIKLLALITSNYRLYYQCKILSRKGYSGQQIAKTINVHPYRVKLALNQVKHYQLTHLLNIIDQCAETDYKLKSSYMDKQLILELFILSL persistent 324 holA DNA polymerase III subunit delta 2.7.7.7 GO:0003677,GO:0003887,GO:0006260 WP_070672188.1 UPI0008A2E403 UniRef100_A0AAE5MZI9,UniRef50_K9AV25,UniRef90_A0A3S7GY43 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 140419 140670 . - . GCA_005502385.1_00666_gene GCA_005502385.1_00666 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPNIKSAIKRVRTTETAEARNISQKNAMRTAVKNAKSAIENNADNKAELVNFAIKSVDKAAHSNLIHSNKADRIKSQLMSSSK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 140419 140670 . - . GCA_005502385.1_00666_mRNA GCA_005502385.1_00666 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPNIKSAIKRVRTTETAEARNISQKNAMRTAVKNAKSAIENNADNKAELVNFAIKSVDKAAHSNLIHSNKADRIKSQLMSSSK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 140419 140670 . - 0 GCA_005502385.1_00666 GCA_005502385.1_00666_gene,GCA_005502385.1_00666_mRNA GCA_005502385.1_00666 30S ribosomal protein S20 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPNIKSAIKRVRTTETAEARNISQKNAMRTAVKNAKSAIENNADNKAELVNFAIKSVDKAAHSNLIHSNKADRIKSQLMSSSK persistent 83 rpsT 30S ribosomal protein S20 GO:0003723,GO:0003735,GO:0005829,GO:0005840,GO:0006412,GO:0015935,GO:0070181 COG0268,J WP_017176203.1 UPI000307287E UniRef100_A0A2A1MFY7,UniRef50_Q5HNW1,UniRef90_Q4L6T5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 141001 142824 . + . GCA_005502385.1_00667_gene GCA_005502385.1_00667 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDMQERYNRRDNIRNFSIIAHIDHGKSTLADRILENTKSVETREMQNQLLDSMDLERERGITIKLNAVRLKYESKDGQTYTFHLIDTPGHVDFSYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLELLPVVNKIDLPAAEPERVKQELEDVIGLDKDEVVLASAKSNIGIDEILEKIVEVVPPPEGDPSGPLKALIFDSEYDPYRGVISSIRVMEGVVKAGDRIKMMATGKEFEVTEVGINTPKQLPIEELTVGDVGYIIASIKNVDDSRVGDTITHVDRPADAPLKGYKKMNPMVYCGLFPIDNKDYNDLREALEKLQLNDASLEFEPESSQALGFGFRTGFLGMLHMEIIQERIEREFGIELIATAPSVIYKCEMNDGSEVTVDNPSQMPERDRIKAIYEPYVKATMMVPNDYVGAVMELCQRKRGQFINMDYLDDIRVNIVYEIPLSEVVFDFFDQLKSNTKGYASFDYEFIENKESNLVKMDILLNGDKVDALSFIVHRDFAYERGKALVEKLKTLIPRQQFEVPVQAAIGQKIVARTNIKSMGKNVLSKCYGGDISRKRKLLEKQKAGKAKMKAVGNVDIPQDAFLAVLKMDDE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 141001 142824 . + . GCA_005502385.1_00667_mRNA GCA_005502385.1_00667 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDMQERYNRRDNIRNFSIIAHIDHGKSTLADRILENTKSVETREMQNQLLDSMDLERERGITIKLNAVRLKYESKDGQTYTFHLIDTPGHVDFSYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLELLPVVNKIDLPAAEPERVKQELEDVIGLDKDEVVLASAKSNIGIDEILEKIVEVVPPPEGDPSGPLKALIFDSEYDPYRGVISSIRVMEGVVKAGDRIKMMATGKEFEVTEVGINTPKQLPIEELTVGDVGYIIASIKNVDDSRVGDTITHVDRPADAPLKGYKKMNPMVYCGLFPIDNKDYNDLREALEKLQLNDASLEFEPESSQALGFGFRTGFLGMLHMEIIQERIEREFGIELIATAPSVIYKCEMNDGSEVTVDNPSQMPERDRIKAIYEPYVKATMMVPNDYVGAVMELCQRKRGQFINMDYLDDIRVNIVYEIPLSEVVFDFFDQLKSNTKGYASFDYEFIENKESNLVKMDILLNGDKVDALSFIVHRDFAYERGKALVEKLKTLIPRQQFEVPVQAAIGQKIVARTNIKSMGKNVLSKCYGGDISRKRKLLEKQKAGKAKMKAVGNVDIPQDAFLAVLKMDDE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 141001 142824 . + 0 GCA_005502385.1_00667 GCA_005502385.1_00667_gene,GCA_005502385.1_00667_mRNA GCA_005502385.1_00667 Elongation factor 4 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDMQERYNRRDNIRNFSIIAHIDHGKSTLADRILENTKSVETREMQNQLLDSMDLERERGITIKLNAVRLKYESKDGQTYTFHLIDTPGHVDFSYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLELLPVVNKIDLPAAEPERVKQELEDVIGLDKDEVVLASAKSNIGIDEILEKIVEVVPPPEGDPSGPLKALIFDSEYDPYRGVISSIRVMEGVVKAGDRIKMMATGKEFEVTEVGINTPKQLPIEELTVGDVGYIIASIKNVDDSRVGDTITHVDRPADAPLKGYKKMNPMVYCGLFPIDNKDYNDLREALEKLQLNDASLEFEPESSQALGFGFRTGFLGMLHMEIIQERIEREFGIELIATAPSVIYKCEMNDGSEVTVDNPSQMPERDRIKAIYEPYVKATMMVPNDYVGAVMELCQRKRGQFINMDYLDDIRVNIVYEIPLSEVVFDFFDQLKSNTKGYASFDYEFIENKESNLVKMDILLNGDKVDALSFIVHRDFAYERGKALVEKLKTLIPRQQFEVPVQAAIGQKIVARTNIKSMGKNVLSKCYGGDISRKRKLLEKQKAGKAKMKAVGNVDIPQDAFLAVLKMDDE persistent 607 lepA translation elongation factor 4 3.6.5.n1 GO:0003746,GO:0003924,GO:0005525,GO:0005886,GO:0043022,GO:0045727,GO:1990606 COG0481,J UniRef50_Q2FXY7,UniRef90_Q2FXY7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 142907 144028 . + . GCA_005502385.1_00668_gene GCA_005502385.1_00668 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSIKSAYIHIPFCVRICTYCDFNKYFINKQPVDEYISALIKEMKTSEIRKLETMYVGGGTPTALNLKQLERLLKAIQSTFSIKGEYTFEANPDELTLDKVKLLHSYGVNRISMGVQTFKPELLKILGRTHKTQDIYNAVEYARKANIESISLDLMYHLPTQTLEDFSDSLNRAIQMDIDHISSYGLILEPKTQFYNMYRKGKLKLPNEDLGAEMYQYLMNVLGETSFKQYEISNFAKSHHESRHNKTYWLNEEYYGFGAGASGYVNGERYSNLNPVNHYINAINNHQRPILTSNFPTQSERMEEEMFLGLRMNKGVDKVKFLSKFGTSMDKVFGETINNLKKKNLLYERDNHISLTNRGKIIGNEVFEAFLLN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 142907 144028 . + . GCA_005502385.1_00668_mRNA GCA_005502385.1_00668 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSIKSAYIHIPFCVRICTYCDFNKYFINKQPVDEYISALIKEMKTSEIRKLETMYVGGGTPTALNLKQLERLLKAIQSTFSIKGEYTFEANPDELTLDKVKLLHSYGVNRISMGVQTFKPELLKILGRTHKTQDIYNAVEYARKANIESISLDLMYHLPTQTLEDFSDSLNRAIQMDIDHISSYGLILEPKTQFYNMYRKGKLKLPNEDLGAEMYQYLMNVLGETSFKQYEISNFAKSHHESRHNKTYWLNEEYYGFGAGASGYVNGERYSNLNPVNHYINAINNHQRPILTSNFPTQSERMEEEMFLGLRMNKGVDKVKFLSKFGTSMDKVFGETINNLKKKNLLYERDNHISLTNRGKIIGNEVFEAFLLN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 142907 144028 . + 0 GCA_005502385.1_00668 GCA_005502385.1_00668_gene,GCA_005502385.1_00668_mRNA GCA_005502385.1_00668 Heme chaperone HemW GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSIKSAYIHIPFCVRICTYCDFNKYFINKQPVDEYISALIKEMKTSEIRKLETMYVGGGTPTALNLKQLERLLKAIQSTFSIKGEYTFEANPDELTLDKVKLLHSYGVNRISMGVQTFKPELLKILGRTHKTQDIYNAVEYARKANIESISLDLMYHLPTQTLEDFSDSLNRAIQMDIDHISSYGLILEPKTQFYNMYRKGKLKLPNEDLGAEMYQYLMNVLGETSFKQYEISNFAKSHHESRHNKTYWLNEEYYGFGAGASGYVNGERYSNLNPVNHYINAINNHQRPILTSNFPTQSERMEEEMFLGLRMNKGVDKVKFLSKFGTSMDKVFGETINNLKKKNLLYERDNHISLTNRGKIIGNEVFEAFLLN persistent 373 hemW radical SAM family heme chaperone HemW GO:0005737,GO:0006779,GO:0051539,GO:0051989 UniRef50_A0A0D6HI97,UniRef90_A0A3S7GXJ5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 144132 145109 . + . GCA_005502385.1_00669_gene GCA_005502385.1_00669 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MITNRQLSILNAIVEDYVDLGQPIGSKTLIDRHNLNVSPATIRNEMKYLEELNFLEKIHSSSGRAPSEQGFRLYVNQLLKQTSHQKQNKVQRLNQLLIENHYDISSALSYFADELSIKSQYATLVVRPNHKTDIINNVHLIRANSSIIIMVIIYNSGHVEHLHLSESMEFNDERLTRISNFLTDNYYKSQFDFNKKLKQFTNSIAEQSFINELTIMLTSHLHKQSNSIFMGGKVKLIDALNETNVSSIQPILQYLESEKIIELLEDISTSEINVKIGHEIDEGLSDISIITSQYHFDDALKGQIAVIGPTAMHYQNVIQLLNQIW . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 144132 145109 . + . GCA_005502385.1_00669_mRNA GCA_005502385.1_00669 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MITNRQLSILNAIVEDYVDLGQPIGSKTLIDRHNLNVSPATIRNEMKYLEELNFLEKIHSSSGRAPSEQGFRLYVNQLLKQTSHQKQNKVQRLNQLLIENHYDISSALSYFADELSIKSQYATLVVRPNHKTDIINNVHLIRANSSIIIMVIIYNSGHVEHLHLSESMEFNDERLTRISNFLTDNYYKSQFDFNKKLKQFTNSIAEQSFINELTIMLTSHLHKQSNSIFMGGKVKLIDALNETNVSSIQPILQYLESEKIIELLEDISTSEINVKIGHEIDEGLSDISIITSQYHFDDALKGQIAVIGPTAMHYQNVIQLLNQIW . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 144132 145109 . + 0 GCA_005502385.1_00669 GCA_005502385.1_00669_gene,GCA_005502385.1_00669_mRNA GCA_005502385.1_00669 Heat-inducible transcription repressor HrcA GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MITNRQLSILNAIVEDYVDLGQPIGSKTLIDRHNLNVSPATIRNEMKYLEELNFLEKIHSSSGRAPSEQGFRLYVNQLLKQTSHQKQNKVQRLNQLLIENHYDISSALSYFADELSIKSQYATLVVRPNHKTDIINNVHLIRANSSIIIMVIIYNSGHVEHLHLSESMEFNDERLTRISNFLTDNYYKSQFDFNKKLKQFTNSIAEQSFINELTIMLTSHLHKQSNSIFMGGKVKLIDALNETNVSSIQPILQYLESEKIIELLEDISTSEINVKIGHEIDEGLSDISIITSQYHFDDALKGQIAVIGPTAMHYQNVIQLLNQIW persistent 325 hrcA heat-inducible transcriptional repressor HrcA GO:0003677,GO:0006355 WP_048681921.1 UPI00065F98C2 UniRef100_UPI00065F98C2,UniRef50_P68792,UniRef90_A0A3S7GXP9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 145141 145764 . + . GCA_005502385.1_00670_gene GCA_005502385.1_00670 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEKDESVKSNTEHTEENENVKNEASSSNDVENNPSEEELNNESTSEHDNEDKNDQSKDEEIQQLQLKANENEEKYLRLYAEFENYKRRIRNENETNKKYQAQPVLTDILPTIDNIERALQIEGDDESFKSLKKGVQMIHESLLRALKDNGLEEIESEGQEFDPNFHQAVVQDDNPDFNSGEITQELQKGYKLKDRVLRPSMVKVNQ . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 145141 145764 . + . GCA_005502385.1_00670_mRNA GCA_005502385.1_00670 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEKDESVKSNTEHTEENENVKNEASSSNDVENNPSEEELNNESTSEHDNEDKNDQSKDEEIQQLQLKANENEEKYLRLYAEFENYKRRIRNENETNKKYQAQPVLTDILPTIDNIERALQIEGDDESFKSLKKGVQMIHESLLRALKDNGLEEIESEGQEFDPNFHQAVVQDDNPDFNSGEITQELQKGYKLKDRVLRPSMVKVNQ . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 145141 145764 . + 0 GCA_005502385.1_00670 GCA_005502385.1_00670_gene,GCA_005502385.1_00670_mRNA GCA_005502385.1_00670 Protein GrpE GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEKDESVKSNTEHTEENENVKNEASSSNDVENNPSEEELNNESTSEHDNEDKNDQSKDEEIQQLQLKANENEEKYLRLYAEFENYKRRIRNENETNKKYQAQPVLTDILPTIDNIERALQIEGDDESFKSLKKGVQMIHESLLRALKDNGLEEIESEGQEFDPNFHQAVVQDDNPDFNSGEITQELQKGYKLKDRVLRPSMVKVNQ persistent 207 grpE nucleotide exchange factor GrpE GO:0000774,GO:0006457,GO:0042803,GO:0051087 UniRef50_Q2FXZ1,UniRef90_A0A657M138 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 145807 147639 . + . GCA_005502385.1_00671_gene GCA_005502385.1_00671 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKVIGIDLGTTNSCVSVLEGDEPKVIQNPEGARTTPSVVAFKNGETQVGEVAKRQAITNPNTVQSIKRHMGTDYKVDIDGKSYTPQELSAMILQNLKNTAESYLGDKVDKAVITVPAYFNDAERQATKDAGKIAGLEVERIINEPTAAALAYGLDKTEQDQKVLVFDLGGGTFDVSILELGDGVFEVLSTAGDNKLGGDDFDQVIIDYLVSEFKKENGVDLSQDKMALQRLKDAAEKAKKDLSGVSQTQISLPFISAGENGPLHLEINLTRSKFEELADSLIRRTMEPTRQALKDAGLSTSEIDEVILVGGSTRIPAVQEAVKKEIGKEPHKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIEIMGGRMNTLIERNTTIPTSKSQVYSTAADNQPAVDIHVLQGERPMASDNKTLGRFQLTDIPPAPRGVPQIEVTFDIDKNGIVNVTAKDLGTNKEQNITIQSSSALSDEEIDRMVKDAEENAEADKQRREEVDLRNEADSLVFQVEKTIKDLGENISEEDKSNAESKKDALKSALEGQDLDDIKAKKEELEQVIQELSAKVYQQAQQAQQQAQGSSQQSNDSNVEDAEFKEVKDDEDKK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 145807 147639 . + . GCA_005502385.1_00671_mRNA GCA_005502385.1_00671 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKVIGIDLGTTNSCVSVLEGDEPKVIQNPEGARTTPSVVAFKNGETQVGEVAKRQAITNPNTVQSIKRHMGTDYKVDIDGKSYTPQELSAMILQNLKNTAESYLGDKVDKAVITVPAYFNDAERQATKDAGKIAGLEVERIINEPTAAALAYGLDKTEQDQKVLVFDLGGGTFDVSILELGDGVFEVLSTAGDNKLGGDDFDQVIIDYLVSEFKKENGVDLSQDKMALQRLKDAAEKAKKDLSGVSQTQISLPFISAGENGPLHLEINLTRSKFEELADSLIRRTMEPTRQALKDAGLSTSEIDEVILVGGSTRIPAVQEAVKKEIGKEPHKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIEIMGGRMNTLIERNTTIPTSKSQVYSTAADNQPAVDIHVLQGERPMASDNKTLGRFQLTDIPPAPRGVPQIEVTFDIDKNGIVNVTAKDLGTNKEQNITIQSSSALSDEEIDRMVKDAEENAEADKQRREEVDLRNEADSLVFQVEKTIKDLGENISEEDKSNAESKKDALKSALEGQDLDDIKAKKEELEQVIQELSAKVYQQAQQAQQQAQGSSQQSNDSNVEDAEFKEVKDDEDKK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 145807 147639 . + 0 GCA_005502385.1_00671 GCA_005502385.1_00671_gene,GCA_005502385.1_00671_mRNA GCA_005502385.1_00671 Chaperone protein DnaK GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKVIGIDLGTTNSCVSVLEGDEPKVIQNPEGARTTPSVVAFKNGETQVGEVAKRQAITNPNTVQSIKRHMGTDYKVDIDGKSYTPQELSAMILQNLKNTAESYLGDKVDKAVITVPAYFNDAERQATKDAGKIAGLEVERIINEPTAAALAYGLDKTEQDQKVLVFDLGGGTFDVSILELGDGVFEVLSTAGDNKLGGDDFDQVIIDYLVSEFKKENGVDLSQDKMALQRLKDAAEKAKKDLSGVSQTQISLPFISAGENGPLHLEINLTRSKFEELADSLIRRTMEPTRQALKDAGLSTSEIDEVILVGGSTRIPAVQEAVKKEIGKEPHKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIEIMGGRMNTLIERNTTIPTSKSQVYSTAADNQPAVDIHVLQGERPMASDNKTLGRFQLTDIPPAPRGVPQIEVTFDIDKNGIVNVTAKDLGTNKEQNITIQSSSALSDEEIDRMVKDAEENAEADKQRREEVDLRNEADSLVFQVEKTIKDLGENISEEDKSNAESKKDALKSALEGQDLDDIKAKKEELEQVIQELSAKVYQQAQQAQQQAQGSSQQSNDSNVEDAEFKEVKDDEDKK persistent 610 dnaK molecular chaperone DnaK GO:0005524,GO:0006457,GO:0016887,GO:0051082,GO:0140662 COG0443,O WP_017176208.1 UPI0002D54A8A UniRef100_A0A4Q9WRU4,UniRef50_P17820,UniRef90_Q49Y22 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 147792 148922 . + . GCA_005502385.1_00672_gene GCA_005502385.1_00672 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKRDYYEVLGVSKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRANYDQFGHSGAQGGFGSQGFGGQDFSGFGGGFEDIFSSFFGGSRQRDPNAPRKGDDLQYTMTLEFDEAVFGTKKEISIRKDVTCHTCHGDGAKPGTSKKTCSYCHGSGHVSVEQNTILGRVRTEQTCPKCEGSGQEFEEPCPTCHGKGTENKTVKLEVTVPEGVDNEQQIRLAGEGAPGENGGPHGDLYVVFRVKPSDKFRRDGDDLFYELNISFPQASLGDEIKVPTLNSNVMLTIPAGTQTGKQFRLKEKGVKNVHGYGHGDLFVNIKVVTPNKLTDRQKELMREFAEISGENPEEQPSNFKDKARKFFRGE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 147792 148922 . + . GCA_005502385.1_00672_mRNA GCA_005502385.1_00672 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKRDYYEVLGVSKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRANYDQFGHSGAQGGFGSQGFGGQDFSGFGGGFEDIFSSFFGGSRQRDPNAPRKGDDLQYTMTLEFDEAVFGTKKEISIRKDVTCHTCHGDGAKPGTSKKTCSYCHGSGHVSVEQNTILGRVRTEQTCPKCEGSGQEFEEPCPTCHGKGTENKTVKLEVTVPEGVDNEQQIRLAGEGAPGENGGPHGDLYVVFRVKPSDKFRRDGDDLFYELNISFPQASLGDEIKVPTLNSNVMLTIPAGTQTGKQFRLKEKGVKNVHGYGHGDLFVNIKVVTPNKLTDRQKELMREFAEISGENPEEQPSNFKDKARKFFRGE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 147792 148922 . + 0 GCA_005502385.1_00672 GCA_005502385.1_00672_gene,GCA_005502385.1_00672_mRNA GCA_005502385.1_00672 Chaperone protein DnaJ GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKRDYYEVLGVSKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRANYDQFGHSGAQGGFGSQGFGGQDFSGFGGGFEDIFSSFFGGSRQRDPNAPRKGDDLQYTMTLEFDEAVFGTKKEISIRKDVTCHTCHGDGAKPGTSKKTCSYCHGSGHVSVEQNTILGRVRTEQTCPKCEGSGQEFEEPCPTCHGKGTENKTVKLEVTVPEGVDNEQQIRLAGEGAPGENGGPHGDLYVVFRVKPSDKFRRDGDDLFYELNISFPQASLGDEIKVPTLNSNVMLTIPAGTQTGKQFRLKEKGVKNVHGYGHGDLFVNIKVVTPNKLTDRQKELMREFAEISGENPEEQPSNFKDKARKFFRGE persistent 376 dnaJ molecular chaperone DnaJ GO:0005524,GO:0006457,GO:0009408,GO:0031072,GO:0051082 COG0484,O WP_017176209.1 UPI000302CE46 UniRef100_A0A4Q9WSX3,UniRef50_P95830,UniRef90_A0A4Z1BSR3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 148925 149863 . + . GCA_005502385.1_00673_gene GCA_005502385.1_00673 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNWTEFAVTVNHEVEPLVTNILENYGSNGVVIEDSNDLINQPTDKFGEIYELKKEDYPEQGVRLKAYFNELKYNTQFKNKLKNEILNLDLIDDSVVEFSAKTIAEVDWANEWKNYFHPFRASERFTIVPSWEDYSKESEDELCIELDPGMAFGTGDHPTTSMCLKAIETYVTPDSSVIDVGTGSGILSIASHLLGVKRIKALDIDEMAVGVAKENFRKNHCENAIEAIPGNLLKEENEKFDVVIANILAHIIDEMIEDAYNTLNEDGYFITSGIIEEKHEDILSHMKRVGFNIVSINHDNGWVCIVGQKVSE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 148925 149863 . + . GCA_005502385.1_00673_mRNA GCA_005502385.1_00673 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNWTEFAVTVNHEVEPLVTNILENYGSNGVVIEDSNDLINQPTDKFGEIYELKKEDYPEQGVRLKAYFNELKYNTQFKNKLKNEILNLDLIDDSVVEFSAKTIAEVDWANEWKNYFHPFRASERFTIVPSWEDYSKESEDELCIELDPGMAFGTGDHPTTSMCLKAIETYVTPDSSVIDVGTGSGILSIASHLLGVKRIKALDIDEMAVGVAKENFRKNHCENAIEAIPGNLLKEENEKFDVVIANILAHIIDEMIEDAYNTLNEDGYFITSGIIEEKHEDILSHMKRVGFNIVSINHDNGWVCIVGQKVSE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 148925 149863 . + 0 GCA_005502385.1_00673 GCA_005502385.1_00673_gene,GCA_005502385.1_00673_mRNA GCA_005502385.1_00673 Ribosomal protein L11 methyltransferase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNWTEFAVTVNHEVEPLVTNILENYGSNGVVIEDSNDLINQPTDKFGEIYELKKEDYPEQGVRLKAYFNELKYNTQFKNKLKNEILNLDLIDDSVVEFSAKTIAEVDWANEWKNYFHPFRASERFTIVPSWEDYSKESEDELCIELDPGMAFGTGDHPTTSMCLKAIETYVTPDSSVIDVGTGSGILSIASHLLGVKRIKALDIDEMAVGVAKENFRKNHCENAIEAIPGNLLKEENEKFDVVIANILAHIIDEMIEDAYNTLNEDGYFITSGIIEEKHEDILSHMKRVGFNIVSINHDNGWVCIVGQKVSE persistent 312 prmA 50S ribosomal protein L11 methyltransferase GO:0008757,GO:0036211 WP_017176210.1 UPI0002F8F387 UniRef100_A0A3S7GXY6,UniRef50_Q49Y20,UniRef90_A0A657M5D7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 149865 150617 . + . GCA_005502385.1_00674_gene GCA_005502385.1_00674 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQRYFINQNADSHQRFFITNEEDIHHIKNVMRNTIGNKIIINFNDKKVFITEITHISSNQIEVLPINQLDIDTELPVDVTICSGLIKADKYEWLLQKSTELGANHFISVGMDRSVVKLQENKVQKKIDRWQKIVKEAAEQSYRLVIPDVKFQSNLKVIYDTINNYDYVLIAYEDEAKHGEKSRFKNILNNFQTNDRVLIIFGPEGGFSDKEIDLFREVSLNIGLGPRILRAETAPLYALSAISFEKELMG . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 149865 150617 . + . GCA_005502385.1_00674_mRNA GCA_005502385.1_00674 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQRYFINQNADSHQRFFITNEEDIHHIKNVMRNTIGNKIIINFNDKKVFITEITHISSNQIEVLPINQLDIDTELPVDVTICSGLIKADKYEWLLQKSTELGANHFISVGMDRSVVKLQENKVQKKIDRWQKIVKEAAEQSYRLVIPDVKFQSNLKVIYDTINNYDYVLIAYEDEAKHGEKSRFKNILNNFQTNDRVLIIFGPEGGFSDKEIDLFREVSLNIGLGPRILRAETAPLYALSAISFEKELMG . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 149865 150617 . + 0 GCA_005502385.1_00674 GCA_005502385.1_00674_gene,GCA_005502385.1_00674_mRNA GCA_005502385.1_00674 Ribosomal RNA small subunit methyltransferase E GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQRYFINQNADSHQRFFITNEEDIHHIKNVMRNTIGNKIIINFNDKKVFITEITHISSNQIEVLPINQLDIDTELPVDVTICSGLIKADKYEWLLQKSTELGANHFISVGMDRSVVKLQENKVQKKIDRWQKIVKEAAEQSYRLVIPDVKFQSNLKVIYDTINNYDYVLIAYEDEAKHGEKSRFKNILNNFQTNDRVLIIFGPEGGFSDKEIDLFREVSLNIGLGPRILRAETAPLYALSAISFEKELMG persistent 250 16S rRNA (uracil(1498)-N(3))-methyltransferase 2.1.1.193 GO:0006364,GO:0008168 WP_017176211.1 UPI00031E3849 UniRef100_A0A3S7GY93,UniRef50_A0A122ER25,UniRef90_A0A3S7GY93 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 150623 151969 . + . GCA_005502385.1_00675_gene GCA_005502385.1_00675 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MATVAFHTLGCKVNHYETEAIWQLFKDVNYERVDFETNADVYVINTCTVTNTGDKKSRQVIRRAIRRNPDAVVCVTGCYAQTSSAEIMEIPGVDVVVGTQDRHKLLSYIDQFREERQPINGVGNIMKNRTYEELDVPYFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPEKVVEQATQLVQSGYKEIVLTGIHTGGYGQDLKNYNLAQLLRDLEEIDGLERIRISSIEASQLTDEVIDVLKNSNKVVRHLHVPLQSGSDTVLKRMRRKYTMEHFSERLTKLHDALPDLAVTSDVIVGFPGETAEEFQETYDFIVKHKFSELHVFPYSQRIGTPAARMDDQIDESIKNERVHKLIALSDQLAKEYASKFENEVLEVIPEEVGETKDTLVGYADNYMKVEFEGSEDLIGEIVKVKINKADYPINIGSAVRIVNHATNKTEEGVLL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 150623 151969 . + . GCA_005502385.1_00675_mRNA GCA_005502385.1_00675 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MATVAFHTLGCKVNHYETEAIWQLFKDVNYERVDFETNADVYVINTCTVTNTGDKKSRQVIRRAIRRNPDAVVCVTGCYAQTSSAEIMEIPGVDVVVGTQDRHKLLSYIDQFREERQPINGVGNIMKNRTYEELDVPYFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPEKVVEQATQLVQSGYKEIVLTGIHTGGYGQDLKNYNLAQLLRDLEEIDGLERIRISSIEASQLTDEVIDVLKNSNKVVRHLHVPLQSGSDTVLKRMRRKYTMEHFSERLTKLHDALPDLAVTSDVIVGFPGETAEEFQETYDFIVKHKFSELHVFPYSQRIGTPAARMDDQIDESIKNERVHKLIALSDQLAKEYASKFENEVLEVIPEEVGETKDTLVGYADNYMKVEFEGSEDLIGEIVKVKINKADYPINIGSAVRIVNHATNKTEEGVLL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 150623 151969 . + 0 GCA_005502385.1_00675 GCA_005502385.1_00675_gene,GCA_005502385.1_00675_mRNA GCA_005502385.1_00675 Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MATVAFHTLGCKVNHYETEAIWQLFKDVNYERVDFETNADVYVINTCTVTNTGDKKSRQVIRRAIRRNPDAVVCVTGCYAQTSSAEIMEIPGVDVVVGTQDRHKLLSYIDQFREERQPINGVGNIMKNRTYEELDVPYFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPEKVVEQATQLVQSGYKEIVLTGIHTGGYGQDLKNYNLAQLLRDLEEIDGLERIRISSIEASQLTDEVIDVLKNSNKVVRHLHVPLQSGSDTVLKRMRRKYTMEHFSERLTKLHDALPDLAVTSDVIVGFPGETAEEFQETYDFIVKHKFSELHVFPYSQRIGTPAARMDDQIDESIKNERVHKLIALSDQLAKEYASKFENEVLEVIPEEVGETKDTLVGYADNYMKVEFEGSEDLIGEIVKVKINKADYPINIGSAVRIVNHATNKTEEGVLL persistent 448 mtaB tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB 2.8.4.5 GO:0006400,GO:0051539,GO:0061712,GO:1904047 COG0621,J WP_137689469.1 UPI0010F55FE2 UniRef100_UPI0010F55FE2,UniRef50_P54462,UniRef90_A0A380G149 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 152102 152278 . + . GCA_005502385.1_00676_gene GCA_005502385.1_00676 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVRRKKKSEAARKRKFK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 152102 152278 . + . GCA_005502385.1_00676_mRNA GCA_005502385.1_00676 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVRRKKKSEAARKRKFK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 152102 152278 . + 0 GCA_005502385.1_00676 GCA_005502385.1_00676_gene,GCA_005502385.1_00676_mRNA GCA_005502385.1_00676 30S ribosomal protein S21 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVRRKKKSEAARKRKFK persistent 58 rpsU 30S ribosomal protein S21 GO:0003735,GO:0005840,GO:0006412,GO:1990904 COG0828,J WP_002449867.1 UPI00019FAB54 UniRef100_A0AAP8PMW3,UniRef50_P21478,UniRef90_B1HTK2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 152430 153137 . + . GCA_005502385.1_00677_gene GCA_005502385.1_00677 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MISINLIHIENTFASLNHSWLGDMSNIIVNPIVLLILTCIIFLGFLYQLYSKRINILGILASLALLILFLGFLINGDVNLISILLFFIGIILVIIELFIVGAVIGIIGIVLIIVSMIMLGDNILVMLFNVIVALILSIIEWVILVKVFNRKIPFFDKVILNDSTSTEAGYRSHDDRSYLVGKTAYTTTDLRPAGIITLDDKRIDAVSDGTFILRNKKVKILEVEGSRVVVREIKI . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 152430 153137 . + . GCA_005502385.1_00677_mRNA GCA_005502385.1_00677 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MISINLIHIENTFASLNHSWLGDMSNIIVNPIVLLILTCIIFLGFLYQLYSKRINILGILASLALLILFLGFLINGDVNLISILLFFIGIILVIIELFIVGAVIGIIGIVLIIVSMIMLGDNILVMLFNVIVALILSIIEWVILVKVFNRKIPFFDKVILNDSTSTEAGYRSHDDRSYLVGKTAYTTTDLRPAGIITLDDKRIDAVSDGTFILRNKKVKILEVEGSRVVVREIKI . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 152430 153137 . + 0 GCA_005502385.1_00677 GCA_005502385.1_00677_gene,GCA_005502385.1_00677_mRNA GCA_005502385.1_00677 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MISINLIHIENTFASLNHSWLGDMSNIIVNPIVLLILTCIIFLGFLYQLYSKRINILGILASLALLILFLGFLINGDVNLISILLFFIGIILVIIELFIVGAVIGIIGIVLIIVSMIMLGDNILVMLFNVIVALILSIIEWVILVKVFNRKIPFFDKVILNDSTSTEAGYRSHDDRSYLVGKTAYTTTDLRPAGIITLDDKRIDAVSDGTFILRNKKVKILEVEGSRVVVREIKI persistent 235 Serine protease WP_017176213.1 UPI00030B9969 UniRef100_A0A4V2KXC1,UniRef50_Q2FXZ8,UniRef90_A0A974KWK2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 153152 154138 . + . GCA_005502385.1_00678_gene GCA_005502385.1_00678 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLNIGIIIIAIIIIVALLLLFSFVPVGLWISAIAAGVKVSIATLVGMRLRRVSPRKVIGPLIKAHKAGLNLTTNQLESHYLAGGNVDRVVDANIAAQRADINLPFERGAAIDLAGRDVLEAVQMSVNPKVIETPFIAGVAMNGIEVKAKARITVRANISRLVGGSGEETIIARVGEGIVSTIGSSEHHTQVLENPDNISKTVLSKGLDSGTAFEILSIDIADVDIGKNIGADLQTEQALADKNIAQAKAEERRAMAVASEQEMKARVQEMRAKVVEAESEVPLAMAEALRKGNIGVKDYYNLKNVEADTGMRNAINKRTEQNDDESPN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 153152 154138 . + . GCA_005502385.1_00678_mRNA GCA_005502385.1_00678 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLNIGIIIIAIIIIVALLLLFSFVPVGLWISAIAAGVKVSIATLVGMRLRRVSPRKVIGPLIKAHKAGLNLTTNQLESHYLAGGNVDRVVDANIAAQRADINLPFERGAAIDLAGRDVLEAVQMSVNPKVIETPFIAGVAMNGIEVKAKARITVRANISRLVGGSGEETIIARVGEGIVSTIGSSEHHTQVLENPDNISKTVLSKGLDSGTAFEILSIDIADVDIGKNIGADLQTEQALADKNIAQAKAEERRAMAVASEQEMKARVQEMRAKVVEAESEVPLAMAEALRKGNIGVKDYYNLKNVEADTGMRNAINKRTEQNDDESPN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 153152 154138 . + 0 GCA_005502385.1_00678 GCA_005502385.1_00678_gene,GCA_005502385.1_00678_mRNA GCA_005502385.1_00678 hypothetical protein UPF0365 protein SA1402 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLNIGIIIIAIIIIVALLLLFSFVPVGLWISAIAAGVKVSIATLVGMRLRRVSPRKVIGPLIKAHKAGLNLTTNQLESHYLAGGNVDRVVDANIAAQRADINLPFERGAAIDLAGRDVLEAVQMSVNPKVIETPFIAGVAMNGIEVKAKARITVRANISRLVGGSGEETIIARVGEGIVSTIGSSEHHTQVLENPDNISKTVLSKGLDSGTAFEILSIDIADVDIGKNIGADLQTEQALADKNIAQAKAEERRAMAVASEQEMKARVQEMRAKVVEAESEVPLAMAEALRKGNIGVKDYYNLKNVEADTGMRNAINKRTEQNDDESPN persistent 328 floA flotillin-like protein FloA GO:0005886,GO:0045121 COG4864,M WP_017176214.1 UPI0002D58399 UniRef100_A0A4Q9WRT8,UniRef50_P54466,UniRef90_Q49Y16 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 154155 154850 . + . GCA_005502385.1_00679_gene GCA_005502385.1_00679 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNIGILIFVISVIVTGISAMRDKSHEQRKNQTPPHKNTQRPTQNTPRKKGIFEQIEEAFNEMASEFDEEEQNKKTSSPKPSSKKETVHSDKNLKKEVKTEHPRGELKRFETKQSHTEKVPSKDSDSTSRERSQSEKDIKKQLEDSLSKELFNVRSEIDKEKEKQLSLIEKKAKEIINDKYLSEKTKRYKLNQLLNSKSIEKNMTHQTFQFDNDPIVDGIIWQEILNKPKKL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 154155 154850 . + . GCA_005502385.1_00679_mRNA GCA_005502385.1_00679 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNIGILIFVISVIVTGISAMRDKSHEQRKNQTPPHKNTQRPTQNTPRKKGIFEQIEEAFNEMASEFDEEEQNKKTSSPKPSSKKETVHSDKNLKKEVKTEHPRGELKRFETKQSHTEKVPSKDSDSTSRERSQSEKDIKKQLEDSLSKELFNVRSEIDKEKEKQLSLIEKKAKEIINDKYLSEKTKRYKLNQLLNSKSIEKNMTHQTFQFDNDPIVDGIIWQEILNKPKKL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 154155 154850 . + 0 GCA_005502385.1_00679 GCA_005502385.1_00679_gene,GCA_005502385.1_00679_mRNA GCA_005502385.1_00679 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNIGILIFVISVIVTGISAMRDKSHEQRKNQTPPHKNTQRPTQNTPRKKGIFEQIEEAFNEMASEFDEEEQNKKTSSPKPSSKKETVHSDKNLKKEVKTEHPRGELKRFETKQSHTEKVPSKDSDSTSRERSQSEKDIKKQLEDSLSKELFNVRSEIDKEKEKQLSLIEKKAKEIINDKYLSEKTKRYKLNQLLNSKSIEKNMTHQTFQFDNDPIVDGIIWQEILNKPKKL persistent 231 Iron transporter WP_048682790.1 UPI0006604C4B UniRef100_UPI0006604C4B,UniRef50_A0A151A4V3,UniRef90_A0A3S7GXQ7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 155123 156070 . + . GCA_005502385.1_00680_gene GCA_005502385.1_00680 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPGIIQIDNINHSQALIGNNDEHLKSIEEAFDVIIHARGQEIAVKGQVLEHVEKAELVLKNLLKVIELGHSITLKDVEAAIKMAKNDTIQYLLDLYDEEITKDAFGKTIRAKTMGQRLYINAMKRNDLVFGIGPAGTGKTFLAVVYAAKQLRKGTVKRIVLTRPAVEAGESLGFLPGDLKEKVDPYLRPLYDGLNTVLGREQTARFIERGTIEIAPLAYMRGRTLDDAFVILDEAQNTTHAQMKMFLTRLGFGSKMVVTGDQTQIDLPKGVKSGLKEAIKNLRGVKGINIMELDQSDVVRHPLVSKIIERYEGDN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 155123 156070 . + . GCA_005502385.1_00680_mRNA GCA_005502385.1_00680 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPGIIQIDNINHSQALIGNNDEHLKSIEEAFDVIIHARGQEIAVKGQVLEHVEKAELVLKNLLKVIELGHSITLKDVEAAIKMAKNDTIQYLLDLYDEEITKDAFGKTIRAKTMGQRLYINAMKRNDLVFGIGPAGTGKTFLAVVYAAKQLRKGTVKRIVLTRPAVEAGESLGFLPGDLKEKVDPYLRPLYDGLNTVLGREQTARFIERGTIEIAPLAYMRGRTLDDAFVILDEAQNTTHAQMKMFLTRLGFGSKMVVTGDQTQIDLPKGVKSGLKEAIKNLRGVKGINIMELDQSDVVRHPLVSKIIERYEGDN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 155123 156070 . + 0 GCA_005502385.1_00680 GCA_005502385.1_00680_gene,GCA_005502385.1_00680_mRNA GCA_005502385.1_00680 PhoH-like protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPGIIQIDNINHSQALIGNNDEHLKSIEEAFDVIIHARGQEIAVKGQVLEHVEKAELVLKNLLKVIELGHSITLKDVEAAIKMAKNDTIQYLLDLYDEEITKDAFGKTIRAKTMGQRLYINAMKRNDLVFGIGPAGTGKTFLAVVYAAKQLRKGTVKRIVLTRPAVEAGESLGFLPGDLKEKVDPYLRPLYDGLNTVLGREQTARFIERGTIEIAPLAYMRGRTLDDAFVILDEAQNTTHAQMKMFLTRLGFGSKMVVTGDQTQIDLPKGVKSGLKEAIKNLRGVKGINIMELDQSDVVRHPLVSKIIERYEGDN persistent 315 PhoH-like protein WP_002449734.1 UPI00019FAB50 UniRef100_A0A1L8Y625,UniRef50_A0A174T1P7,UniRef90_A0A1L8Y625 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 156071 156532 . + . GCA_005502385.1_00681_gene GCA_005502385.1_00681 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFTIDFNDHTNLVKDEWYHQIEDLINFAKEKENIHEVAELSVTFVDKDEIQEINKNYRDKDRVTDVISFALEEDEPDIIGLDIPRVLGDIIICTDVAKEQAESYNHSFERELGFLALHGFLHLLGYDHMNEEDEKEMFGRQKEILNAYGLTRD . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 156071 156532 . + . GCA_005502385.1_00681_mRNA GCA_005502385.1_00681 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFTIDFNDHTNLVKDEWYHQIEDLINFAKEKENIHEVAELSVTFVDKDEIQEINKNYRDKDRVTDVISFALEEDEPDIIGLDIPRVLGDIIICTDVAKEQAESYNHSFERELGFLALHGFLHLLGYDHMNEEDEKEMFGRQKEILNAYGLTRD . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 156071 156532 . + 0 GCA_005502385.1_00681 GCA_005502385.1_00681_gene,GCA_005502385.1_00681_mRNA GCA_005502385.1_00681 Endoribonuclease YbeY GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFTIDFNDHTNLVKDEWYHQIEDLINFAKEKENIHEVAELSVTFVDKDEIQEINKNYRDKDRVTDVISFALEEDEPDIIGLDIPRVLGDIIICTDVAKEQAESYNHSFERELGFLALHGFLHLLGYDHMNEEDEKEMFGRQKEILNAYGLTRD persistent 153 ybeY rRNA maturation RNase YbeY GO:0004540,GO:0042254,GO:0046872 WP_137689470.1 UPI0010F4C8D3 UniRef100_UPI0010F4C8D3,UniRef50_Q03F61,UniRef90_A0A657M2A7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 156889 157293 . + . GCA_005502385.1_00682_gene GCA_005502385.1_00682 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSYQSHYFQEVRKAQQRAYVPYSHFKVGAYLKTKDGRHFYGANVENAAYPATICAERSSLVAAISEGYRPGDFESITVTVDAEHPSSPCGTCRQVLKELCDDDMPVYMTNHKGEMIKSTVAELLPHGFSGKDLE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 156889 157293 . + . GCA_005502385.1_00682_mRNA GCA_005502385.1_00682 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSYQSHYFQEVRKAQQRAYVPYSHFKVGAYLKTKDGRHFYGANVENAAYPATICAERSSLVAAISEGYRPGDFESITVTVDAEHPSSPCGTCRQVLKELCDDDMPVYMTNHKGEMIKSTVAELLPHGFSGKDLE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 156889 157293 . + 0 GCA_005502385.1_00682 GCA_005502385.1_00682_gene,GCA_005502385.1_00682_mRNA GCA_005502385.1_00682 Cytidine deaminase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSYQSHYFQEVRKAQQRAYVPYSHFKVGAYLKTKDGRHFYGANVENAAYPATICAERSSLVAAISEGYRPGDFESITVTVDAEHPSSPCGTCRQVLKELCDDDMPVYMTNHKGEMIKSTVAELLPHGFSGKDLE persistent 134 cdd cytidine deaminase 3.5.4.5 GO:0004126,GO:0005737,GO:0008270,GO:0008655,GO:0009972 COG0295,F WP_002455278.1 UPI0001EF5355 UniRef100_A0A4Q9X0T1,UniRef50_A0A1W7AC49,UniRef90_A0A2A1K8S5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 157294 158193 . + . GCA_005502385.1_00683_gene GCA_005502385.1_00683 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEHKSGFVSIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTREDAQIIFLDTPGIHKPKHKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVKTPVFLVLNKIDLVHPDALMPKIEKYKTYMDFTEIVPISALEGLNVDHFIDVLKDYLPEGPKYYPDDQISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMIKESEERVRIEATIFVERDSQKGIVIGKGGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQKDWRNKVNFIRQMGYVEDQD . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 157294 158193 . + . GCA_005502385.1_00683_mRNA GCA_005502385.1_00683 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEHKSGFVSIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTREDAQIIFLDTPGIHKPKHKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVKTPVFLVLNKIDLVHPDALMPKIEKYKTYMDFTEIVPISALEGLNVDHFIDVLKDYLPEGPKYYPDDQISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMIKESEERVRIEATIFVERDSQKGIVIGKGGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQKDWRNKVNFIRQMGYVEDQD . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 157294 158193 . + 0 GCA_005502385.1_00683 GCA_005502385.1_00683_gene,GCA_005502385.1_00683_mRNA GCA_005502385.1_00683 GTPase Era GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEHKSGFVSIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTREDAQIIFLDTPGIHKPKHKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVKTPVFLVLNKIDLVHPDALMPKIEKYKTYMDFTEIVPISALEGLNVDHFIDVLKDYLPEGPKYYPDDQISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMIKESEERVRIEATIFVERDSQKGIVIGKGGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQKDWRNKVNFIRQMGYVEDQD persistent 299 era GTPase Era GO:0000028,GO:0003723,GO:0003924,GO:0005525,GO:0005829,GO:0005886,GO:0043024,GO:0070181 COG1159,J WP_002449851.1 UPI00019FAB4C UniRef100_A0A2A1MCZ2,UniRef50_P42182,UniRef90_Q2FY06 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 158227 158976 . + . GCA_005502385.1_00684_gene GCA_005502385.1_00684 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLEKQKGIIIKSVDYGESDKIITILNEHGAKIPIMVRRAKKSKTGLQAHTQLFVYGLFIYNKWKGMGTLSSIDVINQYYQLRLDIFDSSYATLCVEAIDRSLEPNEVSLYHYKLLEFVLNKISEGNSAQLMSIIVLLKCMNKFGFGAFFDYCAITGDTDQSKLIAYSFKYDGTISETVLNNDPYALKLSNKTFYLLDILQKLPIDKMNHFNINQALLDEMSELMIMLYREYAGMYFKGQKLINQLKRLE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 158227 158976 . + . GCA_005502385.1_00684_mRNA GCA_005502385.1_00684 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLEKQKGIIIKSVDYGESDKIITILNEHGAKIPIMVRRAKKSKTGLQAHTQLFVYGLFIYNKWKGMGTLSSIDVINQYYQLRLDIFDSSYATLCVEAIDRSLEPNEVSLYHYKLLEFVLNKISEGNSAQLMSIIVLLKCMNKFGFGAFFDYCAITGDTDQSKLIAYSFKYDGTISETVLNNDPYALKLSNKTFYLLDILQKLPIDKMNHFNINQALLDEMSELMIMLYREYAGMYFKGQKLINQLKRLE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 158227 158976 . + 0 GCA_005502385.1_00684 GCA_005502385.1_00684_gene,GCA_005502385.1_00684_mRNA GCA_005502385.1_00684 DNA repair protein RecO GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLEKQKGIIIKSVDYGESDKIITILNEHGAKIPIMVRRAKKSKTGLQAHTQLFVYGLFIYNKWKGMGTLSSIDVINQYYQLRLDIFDSSYATLCVEAIDRSLEPNEVSLYHYKLLEFVLNKISEGNSAQLMSIIVLLKCMNKFGFGAFFDYCAITGDTDQSKLIAYSFKYDGTISETVLNNDPYALKLSNKTFYLLDILQKLPIDKMNHFNINQALLDEMSELMIMLYREYAGMYFKGQKLINQLKRLE persistent 249 recO DNA repair protein RecO GO:0003677,GO:0006281,GO:0006310 WP_017176218.1 UPI0002D525BC UniRef100_A0A4Q9WV74,UniRef50_Q49Y09,UniRef90_A0A4Q9WV74 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 159049 160440 . - . GCA_005502385.1_00685_gene GCA_005502385.1_00685 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVKDMDTIVSLAKHRGFVFPGSDIYGGLSNTWDYGPLGVELKNNIKKAWWQKFITQSPYNVGIDAAILMNPKTWEASGHLGNFNDPMIDNKDSKIRYRADKLIEDYMQNEKGDENFIADGLSFEEMKRIIDDEGIVCPVSGTANWTDIRQFNLMFKTFQGVTEDSTNELFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFCKPGEEIEWQNYWKTFASQWLKDLNINEENMRLRDHDEEELSHYSNATTDIEYKFPFGWGELWGIASRTDFDLKKHSEHSGEDFRYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVMHFHPALAPYKAAVLPLSKKLSEEAIKIFEQLSSKFSVDFDESQSIGKRYRRQDEIGTPYCITFDFDSLEDNQVTVRDRDSMEQVRMPISELETFLAEKVKF . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 159049 160440 . - . GCA_005502385.1_00685_mRNA GCA_005502385.1_00685 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVKDMDTIVSLAKHRGFVFPGSDIYGGLSNTWDYGPLGVELKNNIKKAWWQKFITQSPYNVGIDAAILMNPKTWEASGHLGNFNDPMIDNKDSKIRYRADKLIEDYMQNEKGDENFIADGLSFEEMKRIIDDEGIVCPVSGTANWTDIRQFNLMFKTFQGVTEDSTNELFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFCKPGEEIEWQNYWKTFASQWLKDLNINEENMRLRDHDEEELSHYSNATTDIEYKFPFGWGELWGIASRTDFDLKKHSEHSGEDFRYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVMHFHPALAPYKAAVLPLSKKLSEEAIKIFEQLSSKFSVDFDESQSIGKRYRRQDEIGTPYCITFDFDSLEDNQVTVRDRDSMEQVRMPISELETFLAEKVKF . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 159049 160440 . - 0 GCA_005502385.1_00685 GCA_005502385.1_00685_gene,GCA_005502385.1_00685_mRNA GCA_005502385.1_00685 Glycine--tRNA ligase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVKDMDTIVSLAKHRGFVFPGSDIYGGLSNTWDYGPLGVELKNNIKKAWWQKFITQSPYNVGIDAAILMNPKTWEASGHLGNFNDPMIDNKDSKIRYRADKLIEDYMQNEKGDENFIADGLSFEEMKRIIDDEGIVCPVSGTANWTDIRQFNLMFKTFQGVTEDSTNELFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFCKPGEEIEWQNYWKTFASQWLKDLNINEENMRLRDHDEEELSHYSNATTDIEYKFPFGWGELWGIASRTDFDLKKHSEHSGEDFRYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVMHFHPALAPYKAAVLPLSKKLSEEAIKIFEQLSSKFSVDFDESQSIGKRYRRQDEIGTPYCITFDFDSLEDNQVTVRDRDSMEQVRMPISELETFLAEKVKF persistent 463 glyQS glycine--tRNA ligase 6.1.1.14 GO:0000166,GO:0004820,GO:0005524,GO:0005737,GO:0006426,GO:0016740,GO:0046983 COG0423,J WP_017176219.1 UPI0002DD8040 UniRef100_A0A3S7H066,UniRef50_Q2FY08,UniRef90_B9DNL1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 160903 161394 . + . GCA_005502385.1_00686_gene GCA_005502385.1_00686 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSGFIEARPRVGYYYSGKSKNKLVSDHLRQYIIKDHMSLPVIVKEDMTIYDAICTIFLEDTGTLFITNQKDELIGVSSRKDLLRASMIGQDIHTMPISVIMSRMPNIVYLEEEDLVIYAASQMIDKEIDSIPVVRKKENSKYKVVGRISKTTITKLFVSLFKE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 160903 161394 . + . GCA_005502385.1_00686_mRNA GCA_005502385.1_00686 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSGFIEARPRVGYYYSGKSKNKLVSDHLRQYIIKDHMSLPVIVKEDMTIYDAICTIFLEDTGTLFITNQKDELIGVSSRKDLLRASMIGQDIHTMPISVIMSRMPNIVYLEEEDLVIYAASQMIDKEIDSIPVVRKKENSKYKVVGRISKTTITKLFVSLFKE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 160903 161394 . + 0 GCA_005502385.1_00686 GCA_005502385.1_00686_gene,GCA_005502385.1_00686_mRNA GCA_005502385.1_00686 Transcriptional repressor CcpN GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSGFIEARPRVGYYYSGKSKNKLVSDHLRQYIIKDHMSLPVIVKEDMTIYDAICTIFLEDTGTLFITNQKDELIGVSSRKDLLRASMIGQDIHTMPISVIMSRMPNIVYLEEEDLVIYAASQMIDKEIDSIPVVRKKENSKYKVVGRISKTTITKLFVSLFKE persistent 163 Helix-turn-helix transcriptional regulator UPI00036A2D2F UniRef100_A0A4V2KXC4,UniRef50_O34994,UniRef90_A0A4V2KXC4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 161405 162217 . + . GCA_005502385.1_00687_gene GCA_005502385.1_00687 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MENIKIIIASDSIGDTAELVASACVAQFNPKACKHGFLRYPYIETFKDIDEVIQVAIDKNAIIVYTLVEPKIKAYMKKKVDAFSLKAVDIMGPLMTLLNQTHDEEPYNQPGRVHKLDDAYFKKIDAIEFAVKYDDGKDAKGLPKADIVLIGISRTSKTPLSQYLAHKSYKVMNIPLVPEVTPPDELFKINPNKCIALKISEDKLNLIRKQRLKQLGLGEHARYATEDRIKEEIQYFEKIVEKIGCPVIDVSDKAIEETANDVIQIIESKA . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 161405 162217 . + . GCA_005502385.1_00687_mRNA GCA_005502385.1_00687 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MENIKIIIASDSIGDTAELVASACVAQFNPKACKHGFLRYPYIETFKDIDEVIQVAIDKNAIIVYTLVEPKIKAYMKKKVDAFSLKAVDIMGPLMTLLNQTHDEEPYNQPGRVHKLDDAYFKKIDAIEFAVKYDDGKDAKGLPKADIVLIGISRTSKTPLSQYLAHKSYKVMNIPLVPEVTPPDELFKINPNKCIALKISEDKLNLIRKQRLKQLGLGEHARYATEDRIKEEIQYFEKIVEKIGCPVIDVSDKAIEETANDVIQIIESKA . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 161405 162217 . + 0 GCA_005502385.1_00687 GCA_005502385.1_00687_gene,GCA_005502385.1_00687_mRNA GCA_005502385.1_00687 Putative pyruvate%2C phosphate dikinase regulatory protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MENIKIIIASDSIGDTAELVASACVAQFNPKACKHGFLRYPYIETFKDIDEVIQVAIDKNAIIVYTLVEPKIKAYMKKKVDAFSLKAVDIMGPLMTLLNQTHDEEPYNQPGRVHKLDDAYFKKIDAIEFAVKYDDGKDAKGLPKADIVLIGISRTSKTPLSQYLAHKSYKVMNIPLVPEVTPPDELFKINPNKCIALKISEDKLNLIRKQRLKQLGLGEHARYATEDRIKEEIQYFEKIVEKIGCPVIDVSDKAIEETANDVIQIIESKA persistent 270 Putative pyruvate, phosphate dikinase regulatory protein WP_017176221.1 UPI0003064BE5 UniRef100_A0A8X8GGT4,UniRef50_Q2FY10,UniRef90_A0A8X8GGT4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 162281 164089 . + . GCA_005502385.1_00688_gene GCA_005502385.1_00688 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRIEQSVINEIKEKTDILDLVSEYVKLEKRGRNYIGLCPFHDEKTPSFTVSEDKQICHCFGCKKGGNVFQFIQDIKDISFVEAVQELGERVNIKVDIGHSNPSTTQIASEDLKMIEMHELINEYYMYALMKSVEGEEALNYLVNRGFTEELIKSRGIGYAPNNAHFCHDFLQQKGYDIELAYEAGLLSRNEENFSYYDRFRDRIMFPLKNAQGRIVGFSGRTYNNQEPKYLNSPETPIFQKRRLLYNLDSARKSIRKNDEVMLLEGFMDVIKADYAGLKTVVASMGTALSEDHITVLKKLTSNITLMFDGDFAGQEAILKTGEHLLKHGLNVFVVQLPKNMDPDEYIVKFGKEKFIEFINNEKKSFIIYKVQFYRDEIENNDLAYERHFKEITEDLSFVRSSILKNKIVNDVADIFNIDANTIMSNVHQQPEFISYEEDYIGNTNDNSNLNSQNLNIVFTHLNKSEKAQRALLKHFMMDKDVFLNYNRQLEANDFTNKYFQSIFKVLTDYYSENDYYSISDLILYIEDKDIREAIIQLDDYELNREPYDLEIEEYISTLNENKYEDSIEELNHKLKEALRIGDVESQKYYLQMIVNKNKQRM . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 162281 164089 . + . GCA_005502385.1_00688_mRNA GCA_005502385.1_00688 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRIEQSVINEIKEKTDILDLVSEYVKLEKRGRNYIGLCPFHDEKTPSFTVSEDKQICHCFGCKKGGNVFQFIQDIKDISFVEAVQELGERVNIKVDIGHSNPSTTQIASEDLKMIEMHELINEYYMYALMKSVEGEEALNYLVNRGFTEELIKSRGIGYAPNNAHFCHDFLQQKGYDIELAYEAGLLSRNEENFSYYDRFRDRIMFPLKNAQGRIVGFSGRTYNNQEPKYLNSPETPIFQKRRLLYNLDSARKSIRKNDEVMLLEGFMDVIKADYAGLKTVVASMGTALSEDHITVLKKLTSNITLMFDGDFAGQEAILKTGEHLLKHGLNVFVVQLPKNMDPDEYIVKFGKEKFIEFINNEKKSFIIYKVQFYRDEIENNDLAYERHFKEITEDLSFVRSSILKNKIVNDVADIFNIDANTIMSNVHQQPEFISYEEDYIGNTNDNSNLNSQNLNIVFTHLNKSEKAQRALLKHFMMDKDVFLNYNRQLEANDFTNKYFQSIFKVLTDYYSENDYYSISDLILYIEDKDIREAIIQLDDYELNREPYDLEIEEYISTLNENKYEDSIEELNHKLKEALRIGDVESQKYYLQMIVNKNKQRM . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 162281 164089 . + 0 GCA_005502385.1_00688 GCA_005502385.1_00688_gene,GCA_005502385.1_00688_mRNA GCA_005502385.1_00688 DNA primase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRIEQSVINEIKEKTDILDLVSEYVKLEKRGRNYIGLCPFHDEKTPSFTVSEDKQICHCFGCKKGGNVFQFIQDIKDISFVEAVQELGERVNIKVDIGHSNPSTTQIASEDLKMIEMHELINEYYMYALMKSVEGEEALNYLVNRGFTEELIKSRGIGYAPNNAHFCHDFLQQKGYDIELAYEAGLLSRNEENFSYYDRFRDRIMFPLKNAQGRIVGFSGRTYNNQEPKYLNSPETPIFQKRRLLYNLDSARKSIRKNDEVMLLEGFMDVIKADYAGLKTVVASMGTALSEDHITVLKKLTSNITLMFDGDFAGQEAILKTGEHLLKHGLNVFVVQLPKNMDPDEYIVKFGKEKFIEFINNEKKSFIIYKVQFYRDEIENNDLAYERHFKEITEDLSFVRSSILKNKIVNDVADIFNIDANTIMSNVHQQPEFISYEEDYIGNTNDNSNLNSQNLNIVFTHLNKSEKAQRALLKHFMMDKDVFLNYNRQLEANDFTNKYFQSIFKVLTDYYSENDYYSISDLILYIEDKDIREAIIQLDDYELNREPYDLEIEEYISTLNENKYEDSIEELNHKLKEALRIGDVESQKYYLQMIVNKNKQRM persistent 602 DNA primase 2.7.7.101 WP_017176222.1 UPI0002E2FBAA UniRef100_A0A8X8GMR0,UniRef50_O05338,UniRef90_A0A8X8GMR0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 164362 165468 . + . GCA_005502385.1_00689_gene GCA_005502385.1_00689 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSDNQVKIKKQTIDPTLTLEDVKKQLIEKGKKEGHLSHEEIAEKLQNFDMDSDQMDDFFDQLNDNDISLVNEKDSSDTDEKLNPNDLSAPPGVKINDPVRMYLKEIGRVNLLSAQEEIELAKRIEQGDEVAKSRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPAPEEIGEEMDLPPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEAQSPSDHAAYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKRLKDFMD . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 164362 165468 . + . GCA_005502385.1_00689_mRNA GCA_005502385.1_00689 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSDNQVKIKKQTIDPTLTLEDVKKQLIEKGKKEGHLSHEEIAEKLQNFDMDSDQMDDFFDQLNDNDISLVNEKDSSDTDEKLNPNDLSAPPGVKINDPVRMYLKEIGRVNLLSAQEEIELAKRIEQGDEVAKSRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPAPEEIGEEMDLPPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEAQSPSDHAAYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKRLKDFMD . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 164362 165468 . + 0 GCA_005502385.1_00689 GCA_005502385.1_00689_gene,GCA_005502385.1_00689_mRNA GCA_005502385.1_00689 RNA polymerase sigma factor SigA GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSDNQVKIKKQTIDPTLTLEDVKKQLIEKGKKEGHLSHEEIAEKLQNFDMDSDQMDDFFDQLNDNDISLVNEKDSSDTDEKLNPNDLSAPPGVKINDPVRMYLKEIGRVNLLSAQEEIELAKRIEQGDEVAKSRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPAPEEIGEEMDLPPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEAQSPSDHAAYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKRLKDFMD persistent 368 rpoD RNA polymerase sigma factor RpoD GO:0003677,GO:0005737,GO:0006352,GO:0006355,GO:0016987 COG0568,K WP_002449793.1 UPI00019FAB46 UniRef100_A0A1L8Y631,UniRef50_P0A0J0,UniRef90_P0A0J0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 165572 166261 . + . GCA_005502385.1_00690_gene GCA_005502385.1_00690 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MISLNHRLKVVSQYLLPNSLADIGSDHAYLPIYALQHHLCDDAIAGEVIKGPYTAAKTNVAQHQLTQHIDVRLGDGLSILTEKDKVDNVTICGMGGPLIAKILDEGKNKLAHHPRLILQSNIQTETLRKTLQHLNYDIIAEEILEEKGHIYEIVVSEWKENLNLLNKKSLKFGPILLNHKNDIFIKKWERELAALEYIRNQLNPIQHHERLEEIEEEISMIREVLYNEN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 165572 166261 . + . GCA_005502385.1_00690_mRNA GCA_005502385.1_00690 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MISLNHRLKVVSQYLLPNSLADIGSDHAYLPIYALQHHLCDDAIAGEVIKGPYTAAKTNVAQHQLTQHIDVRLGDGLSILTEKDKVDNVTICGMGGPLIAKILDEGKNKLAHHPRLILQSNIQTETLRKTLQHLNYDIIAEEILEEKGHIYEIVVSEWKENLNLLNKKSLKFGPILLNHKNDIFIKKWERELAALEYIRNQLNPIQHHERLEEIEEEISMIREVLYNEN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 165572 166261 . + 0 GCA_005502385.1_00690 GCA_005502385.1_00690_gene,GCA_005502385.1_00690_mRNA GCA_005502385.1_00690 tRNA (adenine(22)-N(1))-methyltransferase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MISLNHRLKVVSQYLLPNSLADIGSDHAYLPIYALQHHLCDDAIAGEVIKGPYTAAKTNVAQHQLTQHIDVRLGDGLSILTEKDKVDNVTICGMGGPLIAKILDEGKNKLAHHPRLILQSNIQTETLRKTLQHLNYDIIAEEILEEKGHIYEIVVSEWKENLNLLNKKSLKFGPILLNHKNDIFIKKWERELAALEYIRNQLNPIQHHERLEEIEEEISMIREVLYNEN persistent 229 trmK tRNA (Adenine(22)-N(1))-methyltransferase TrmK 2.1.1.217 WP_017176223.1 UPI0002E89AA2 UniRef100_A0A3S7GXQ6,UniRef50_A0A239Z5U5,UniRef90_A0A3S7GXQ6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 166251 167354 . + . GCA_005502385.1_00691_gene GCA_005502385.1_00691 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIKELMSIIDQHVPLKTAESWDNVGLLIGDDTKEITGILTALDCTMEVIEEAISKGYNTIIAHHPLIFKGVKSLVNDGYGKLIHMLIQNDIQLIALHTNLDNHIDGVNEMLAKKLNLTNIRFLNEEESFYYKVQTYIPEENLESFKYHINNIGLAKEGNYEYCFFESKGKGQFKPVGDARPHIGELNRIEHVNEVKVEFMIRKDQLSIAKNAIINYHPYETPVYDFIKMTTSANYGLGKIGELNEPLNLEDFAKYAKAHLNIPSVRYTGPSEALIKTVAIIGGAGIGFETSAFKKGADVFVTGDIKHHDALDAKTNGIHLLDINHYSEYVMKEGLKDLLGRWLFNNDSKQFNIEASEINTDPFNYI . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 166251 167354 . + . GCA_005502385.1_00691_mRNA GCA_005502385.1_00691 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIKELMSIIDQHVPLKTAESWDNVGLLIGDDTKEITGILTALDCTMEVIEEAISKGYNTIIAHHPLIFKGVKSLVNDGYGKLIHMLIQNDIQLIALHTNLDNHIDGVNEMLAKKLNLTNIRFLNEEESFYYKVQTYIPEENLESFKYHINNIGLAKEGNYEYCFFESKGKGQFKPVGDARPHIGELNRIEHVNEVKVEFMIRKDQLSIAKNAIINYHPYETPVYDFIKMTTSANYGLGKIGELNEPLNLEDFAKYAKAHLNIPSVRYTGPSEALIKTVAIIGGAGIGFETSAFKKGADVFVTGDIKHHDALDAKTNGIHLLDINHYSEYVMKEGLKDLLGRWLFNNDSKQFNIEASEINTDPFNYI . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 166251 167354 . + 0 GCA_005502385.1_00691 GCA_005502385.1_00691_gene,GCA_005502385.1_00691_mRNA GCA_005502385.1_00691 GTP cyclohydrolase 1 type 2 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIKELMSIIDQHVPLKTAESWDNVGLLIGDDTKEITGILTALDCTMEVIEEAISKGYNTIIAHHPLIFKGVKSLVNDGYGKLIHMLIQNDIQLIALHTNLDNHIDGVNEMLAKKLNLTNIRFLNEEESFYYKVQTYIPEENLESFKYHINNIGLAKEGNYEYCFFESKGKGQFKPVGDARPHIGELNRIEHVNEVKVEFMIRKDQLSIAKNAIINYHPYETPVYDFIKMTTSANYGLGKIGELNEPLNLEDFAKYAKAHLNIPSVRYTGPSEALIKTVAIIGGAGIGFETSAFKKGADVFVTGDIKHHDALDAKTNGIHLLDINHYSEYVMKEGLKDLLGRWLFNNDSKQFNIEASEINTDPFNYI persistent 367 Nif3-like dinuclear metal center hexameric protein 3.5.4.16 GO:0005737,GO:0051540 WP_048761601.1 UPI00065F8477 UniRef100_UPI00065F8477,UniRef50_P67272,UniRef90_A0A6N0I466 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 167379 168725 . + . GCA_005502385.1_00692_gene GCA_005502385.1_00692 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MANHPFEIFNLNPNLIDAVKDLNFNKPTEIQNRIIPRIKKGTNLIGQSQTGTGKSHAFLLPLIDLINTDIKEPQSIVVAPTRELAQQLYKVASHLASFQSDIKVSLFIGGTDIEKDKQRTNQQPQLVIGTPTRINDLAQSGHLHIHKASYLIIDEADLLIDLGLIEDVDYIAARLDENANIAVFSATIPKSLEPFLNKYLSHPEYVVVDNKSQNKKNIEFYLIPTKGTEKVDKTLQLIDILNPYLCIIFCNSRENANELAQSLNESGIKVGMIHGGLTPRERKQQMKRIRNLDFQYVIASDLASRGIDIEGVSHVVNFDVPNDIDFFTHRVGRTGRGNYKGVAITLYSPDEEHNISLIEDKGYHFDNVDIKNGELKPIKAHNTRHKRERKDDHLTNQVKHKVRSKSKNKVKPGYKKKFKQEVERMKRQERKQYSKQRSRQQRKNNKKG . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 167379 168725 . + . GCA_005502385.1_00692_mRNA GCA_005502385.1_00692 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MANHPFEIFNLNPNLIDAVKDLNFNKPTEIQNRIIPRIKKGTNLIGQSQTGTGKSHAFLLPLIDLINTDIKEPQSIVVAPTRELAQQLYKVASHLASFQSDIKVSLFIGGTDIEKDKQRTNQQPQLVIGTPTRINDLAQSGHLHIHKASYLIIDEADLLIDLGLIEDVDYIAARLDENANIAVFSATIPKSLEPFLNKYLSHPEYVVVDNKSQNKKNIEFYLIPTKGTEKVDKTLQLIDILNPYLCIIFCNSRENANELAQSLNESGIKVGMIHGGLTPRERKQQMKRIRNLDFQYVIASDLASRGIDIEGVSHVVNFDVPNDIDFFTHRVGRTGRGNYKGVAITLYSPDEEHNISLIEDKGYHFDNVDIKNGELKPIKAHNTRHKRERKDDHLTNQVKHKVRSKSKNKVKPGYKKKFKQEVERMKRQERKQYSKQRSRQQRKNNKKG . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 167379 168725 . + 0 GCA_005502385.1_00692 GCA_005502385.1_00692_gene,GCA_005502385.1_00692_mRNA GCA_005502385.1_00692 DEAD-box ATP-dependent RNA helicase CshB GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MANHPFEIFNLNPNLIDAVKDLNFNKPTEIQNRIIPRIKKGTNLIGQSQTGTGKSHAFLLPLIDLINTDIKEPQSIVVAPTRELAQQLYKVASHLASFQSDIKVSLFIGGTDIEKDKQRTNQQPQLVIGTPTRINDLAQSGHLHIHKASYLIIDEADLLIDLGLIEDVDYIAARLDENANIAVFSATIPKSLEPFLNKYLSHPEYVVVDNKSQNKKNIEFYLIPTKGTEKVDKTLQLIDILNPYLCIIFCNSRENANELAQSLNESGIKVGMIHGGLTPRERKQQMKRIRNLDFQYVIASDLASRGIDIEGVSHVVNFDVPNDIDFFTHRVGRTGRGNYKGVAITLYSPDEEHNISLIEDKGYHFDNVDIKNGELKPIKAHNTRHKRERKDDHLTNQVKHKVRSKSKNKVKPGYKKKFKQEVERMKRQERKQYSKQRSRQQRKNNKKG persistent 448 cshB DEAD-box ATP-dependent RNA helicase CshB WP_017176225.1 UPI00031A65A0 UniRef100_A0A8X8GPI9,UniRef50_Q2FY15,UniRef90_A0AAE5JML9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 168735 169625 . + . GCA_005502385.1_00693_gene GCA_005502385.1_00693 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLIGSHVSMSGKKMLEGSAEEAHQFGESTFMIYTGAPQNTRRKNINDLNIEKGHKVMEQYGLSNIVVHAPYIINIGNTTKPEVYELGVNFLQNEIERTQAIGAKDIVLHPGAHVGAGADKGINQIIKGLNEVLTHDHDVRIALETMAGKGTEIGRSFEELARIIDGVTHNDRLSICFDTCHTHDAGYNIKNDFDGVLNEFDKIIGIDRIKVVHVNDSKNEQGAHKDRHENIGFGYIGFDALNNVVHHEAFKDIPKILETPYVGEDKKNKKPPYRFEIEMLKSQIFDPKLKEKILNQ . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 168735 169625 . + . GCA_005502385.1_00693_mRNA GCA_005502385.1_00693 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLIGSHVSMSGKKMLEGSAEEAHQFGESTFMIYTGAPQNTRRKNINDLNIEKGHKVMEQYGLSNIVVHAPYIINIGNTTKPEVYELGVNFLQNEIERTQAIGAKDIVLHPGAHVGAGADKGINQIIKGLNEVLTHDHDVRIALETMAGKGTEIGRSFEELARIIDGVTHNDRLSICFDTCHTHDAGYNIKNDFDGVLNEFDKIIGIDRIKVVHVNDSKNEQGAHKDRHENIGFGYIGFDALNNVVHHEAFKDIPKILETPYVGEDKKNKKPPYRFEIEMLKSQIFDPKLKEKILNQ . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 168735 169625 . + 0 GCA_005502385.1_00693 GCA_005502385.1_00693_gene,GCA_005502385.1_00693_mRNA GCA_005502385.1_00693 putative endonuclease 4 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLIGSHVSMSGKKMLEGSAEEAHQFGESTFMIYTGAPQNTRRKNINDLNIEKGHKVMEQYGLSNIVVHAPYIINIGNTTKPEVYELGVNFLQNEIERTQAIGAKDIVLHPGAHVGAGADKGINQIIKGLNEVLTHDHDVRIALETMAGKGTEIGRSFEELARIIDGVTHNDRLSICFDTCHTHDAGYNIKNDFDGVLNEFDKIIGIDRIKVVHVNDSKNEQGAHKDRHENIGFGYIGFDALNNVVHHEAFKDIPKILETPYVGEDKKNKKPPYRFEIEMLKSQIFDPKLKEKILNQ persistent 296 deoxyribonuclease IV 3.1.21.2 GO:0003677,GO:0006281,GO:0008270 WP_048761604.1 UPI00066074C4 UniRef100_UPI00066074C4,UniRef50_P54476,UniRef90_A0A974KWP8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 169746 170522 . + . GCA_005502385.1_00694_gene GCA_005502385.1_00694 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNQPVFELKNIDYYFDNKQVLENINIRINKGDFLAIVGPNGAGKSTLLKVILGLLPLQHGEIYIDGKSYKKNTQSALKISYVSQKANAFTAGFPASVKEVVLSGLTKTKRIFQWFNKSDEQQVDNVLHRLNIHHLKNKNIAELSGGQQQRVLIARALISNPSVLVLDEPTNGIDAKHVNEFYATLQHLKEEGITIILVTHDIGVVVDTATKVACLNKHLHFHGSTEEFKSLDEVEISKIYGHPIKFVDHQHNRSCCEA . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 169746 170522 . + . GCA_005502385.1_00694_mRNA GCA_005502385.1_00694 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNQPVFELKNIDYYFDNKQVLENINIRINKGDFLAIVGPNGAGKSTLLKVILGLLPLQHGEIYIDGKSYKKNTQSALKISYVSQKANAFTAGFPASVKEVVLSGLTKTKRIFQWFNKSDEQQVDNVLHRLNIHHLKNKNIAELSGGQQQRVLIARALISNPSVLVLDEPTNGIDAKHVNEFYATLQHLKEEGITIILVTHDIGVVVDTATKVACLNKHLHFHGSTEEFKSLDEVEISKIYGHPIKFVDHQHNRSCCEA . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 169746 170522 . + 0 GCA_005502385.1_00694 GCA_005502385.1_00694_gene,GCA_005502385.1_00694_mRNA GCA_005502385.1_00694 High-affinity zinc uptake system ATP-binding protein ZnuC GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNQPVFELKNIDYYFDNKQVLENINIRINKGDFLAIVGPNGAGKSTLLKVILGLLPLQHGEIYIDGKSYKKNTQSALKISYVSQKANAFTAGFPASVKEVVLSGLTKTKRIFQWFNKSDEQQVDNVLHRLNIHHLKNKNIAELSGGQQQRVLIARALISNPSVLVLDEPTNGIDAKHVNEFYATLQHLKEEGITIILVTHDIGVVVDTATKVACLNKHLHFHGSTEEFKSLDEVEISKIYGHPIKFVDHQHNRSCCEA persistent 258 Metal ABC transporter ATP-binding protein WP_048761607.1 UPI000660E194 UniRef100_UPI0025569459,UniRef50_A0A1W7AC50,UniRef90_A0A3S7GY70 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 170579 171424 . + . GCA_005502385.1_00695_gene GCA_005502385.1_00695 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIEALLNFDFMRYSLLSGILIGFIAPLIGAFIVVRRLSLIADALSHVTLGGISFGMFIITLSPALAFINPMWFGIIFAIVGALLIEKLRTSYSNYQEIAIPIIMSAGIALSAIFISLADGFNQEIVGLLFGSISAVNLSDLITITIISIVVLLFILLLYKELFILSFDEEYSKVINIPKWIQFLFITIVAMVISASMRVVGILLVSALITLPVAIAMRLTKGFKQLIILSIVIGECSVILGLTLAFYINISPGGVIVVLLVLILGITMLLQKTKRTAKKEH . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 170579 171424 . + . GCA_005502385.1_00695_mRNA GCA_005502385.1_00695 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIEALLNFDFMRYSLLSGILIGFIAPLIGAFIVVRRLSLIADALSHVTLGGISFGMFIITLSPALAFINPMWFGIIFAIVGALLIEKLRTSYSNYQEIAIPIIMSAGIALSAIFISLADGFNQEIVGLLFGSISAVNLSDLITITIISIVVLLFILLLYKELFILSFDEEYSKVINIPKWIQFLFITIVAMVISASMRVVGILLVSALITLPVAIAMRLTKGFKQLIILSIVIGECSVILGLTLAFYINISPGGVIVVLLVLILGITMLLQKTKRTAKKEH . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 170579 171424 . + 0 GCA_005502385.1_00695 GCA_005502385.1_00695_gene,GCA_005502385.1_00695_mRNA GCA_005502385.1_00695 High-affinity zinc uptake system membrane protein ZnuB GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIEALLNFDFMRYSLLSGILIGFIAPLIGAFIVVRRLSLIADALSHVTLGGISFGMFIITLSPALAFINPMWFGIIFAIVGALLIEKLRTSYSNYQEIAIPIIMSAGIALSAIFISLADGFNQEIVGLLFGSISAVNLSDLITITIISIVVLLFILLLYKELFILSFDEEYSKVINIPKWIQFLFITIVAMVISASMRVVGILLVSALITLPVAIAMRLTKGFKQLIILSIVIGECSVILGLTLAFYINISPGGVIVVLLVLILGITMLLQKTKRTAKKEH persistent 281 Metal ABC transporter permease WP_017176228.1 UPI0003051A1F UniRef100_A0A4Q9WSP5,UniRef50_Q2FY18,UniRef90_A0A657ZQ46 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 171428 171850 . + . GCA_005502385.1_00696_gene GCA_005502385.1_00696 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNTNDAIKILKDNGLKYTKKREDMINIFVNEDKYINAKYIQQQLDNDYPGISFDTIYRNLHLFKDLNIVESTELDGEMKFRIACTNHHHHHFICENCGDTKVIDFCPIEQVKQFLPNVDIHTHKLEVYGICETCHNKGIN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 171428 171850 . + . GCA_005502385.1_00696_mRNA GCA_005502385.1_00696 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNTNDAIKILKDNGLKYTKKREDMINIFVNEDKYINAKYIQQQLDNDYPGISFDTIYRNLHLFKDLNIVESTELDGEMKFRIACTNHHHHHFICENCGDTKVIDFCPIEQVKQFLPNVDIHTHKLEVYGICETCHNKGIN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 171428 171850 . + 0 GCA_005502385.1_00696 GCA_005502385.1_00696_gene,GCA_005502385.1_00696_mRNA GCA_005502385.1_00696 Zinc-specific metallo-regulatory protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNTNDAIKILKDNGLKYTKKREDMINIFVNEDKYINAKYIQQQLDNDYPGISFDTIYRNLHLFKDLNIVESTELDGEMKFRIACTNHHHHHFICENCGDTKVIDFCPIEQVKQFLPNVDIHTHKLEVYGICETCHNKGIN persistent 140 Ferric uptake regulation protein WP_002455286.1 UPI0001EF535D UniRef100_A0A1L8Y636,UniRef50_Q2FY19,UniRef90_A0A380FZE9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 172080 172682 . + . GCA_005502385.1_00697_gene GCA_005502385.1_00697 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAFELPNLPYAADALEPHIDKETMEIHHDKHHNTYVTKLNSAVEGTDLESKSIEEIVANLDSVPENIQTAVRNNGGGHLNHSLFWELLTPNSEEKGTVIDKIKEQWGSLDEFKKEFADKAAARFGSGWAWLVVNNGKLEIVTTPNQDNPITEGKTPILGLDVWEHAYYLKYQNKRPDYISAFWNVVNWEKVDELYNAATK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 172080 172682 . + . GCA_005502385.1_00697_mRNA GCA_005502385.1_00697 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAFELPNLPYAADALEPHIDKETMEIHHDKHHNTYVTKLNSAVEGTDLESKSIEEIVANLDSVPENIQTAVRNNGGGHLNHSLFWELLTPNSEEKGTVIDKIKEQWGSLDEFKKEFADKAAARFGSGWAWLVVNNGKLEIVTTPNQDNPITEGKTPILGLDVWEHAYYLKYQNKRPDYISAFWNVVNWEKVDELYNAATK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 172080 172682 . + 0 GCA_005502385.1_00697 GCA_005502385.1_00697_gene,GCA_005502385.1_00697_mRNA GCA_005502385.1_00697 Superoxide dismutase [Mn/Fe] GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAFELPNLPYAADALEPHIDKETMEIHHDKHHNTYVTKLNSAVEGTDLESKSIEEIVANLDSVPENIQTAVRNNGGGHLNHSLFWELLTPNSEEKGTVIDKIKEQWGSLDEFKKEFADKAAARFGSGWAWLVVNNGKLEIVTTPNQDNPITEGKTPILGLDVWEHAYYLKYQNKRPDYISAFWNVVNWEKVDELYNAATK persistent 200 sodA Superoxide dismutase [Mn/Fe] 1.15.1.1 GO:0004784,GO:0005737,GO:0046872 COG0605,P WP_017176229.1 UPI0003128230 UniRef100_A0A4Q9WRV6,UniRef50_Q9K4V3,UniRef90_Q9K4V3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 172813 174858 . + . GCA_005502385.1_00698_gene GCA_005502385.1_00698 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLKRLKEKSNDEKIKHTMNKRISFIFCAIVLIFVLIVLRLGYLQIAQGAHYSQLVKNDENITVNESVPRGRILDRNGKILVDNASKLAITYTRSRKTSQQDMLNTAKKLAKLITMNTDKITKRDKQDFWIQNHPKEVNKLMKKETTMLNNGSISQEQYDKQLHSKITKTQLNSLSKHDLQVLAIYREMSAGSTLDPQMIKNEDVSEKEYAAVSQQLDNLPGVNTSMDWDRKYPYGETLRSIFGSVSTPSEGIPKELTEQYLAKGYSRNDRVGKAYLEYQYEDILRGKKKQLKYTTDKSGKVISSKVINPGSRGNDLQLTIDIDLQKKVESLLENEIKTLRSQGATNMDNALVVVQNPKNGDILAMAGRQIDKKGELLDYDLGNFTGQFAVGSSVKGATLLTGYQNHTIKVGEEMIDEPLHFSGGLTKRSYFNQNGKVLINDKEALMHSSNVYMFKTALRLAGDPYSSGMNLPNNIEEAGQKLRKGLNQVGLGVKTGIDLPNETIGQIEPLTNNPGNYLDLSIGQYDTYTPIQLSQYISTIANNGYRVQPHIGLAIHDATNSDQVGPVKDKIKGNILNKVNNSQDEIDEVKQGFKMAFNEKDGTGYASFHKTVVPSAGKTGTAEVYQNGQPRVNSTYIGYAPVKDPKLAFSIVYTNQPVPPPWLNGGDLGRDIINYYFKNEK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 172813 174858 . + . GCA_005502385.1_00698_mRNA GCA_005502385.1_00698 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLKRLKEKSNDEKIKHTMNKRISFIFCAIVLIFVLIVLRLGYLQIAQGAHYSQLVKNDENITVNESVPRGRILDRNGKILVDNASKLAITYTRSRKTSQQDMLNTAKKLAKLITMNTDKITKRDKQDFWIQNHPKEVNKLMKKETTMLNNGSISQEQYDKQLHSKITKTQLNSLSKHDLQVLAIYREMSAGSTLDPQMIKNEDVSEKEYAAVSQQLDNLPGVNTSMDWDRKYPYGETLRSIFGSVSTPSEGIPKELTEQYLAKGYSRNDRVGKAYLEYQYEDILRGKKKQLKYTTDKSGKVISSKVINPGSRGNDLQLTIDIDLQKKVESLLENEIKTLRSQGATNMDNALVVVQNPKNGDILAMAGRQIDKKGELLDYDLGNFTGQFAVGSSVKGATLLTGYQNHTIKVGEEMIDEPLHFSGGLTKRSYFNQNGKVLINDKEALMHSSNVYMFKTALRLAGDPYSSGMNLPNNIEEAGQKLRKGLNQVGLGVKTGIDLPNETIGQIEPLTNNPGNYLDLSIGQYDTYTPIQLSQYISTIANNGYRVQPHIGLAIHDATNSDQVGPVKDKIKGNILNKVNNSQDEIDEVKQGFKMAFNEKDGTGYASFHKTVVPSAGKTGTAEVYQNGQPRVNSTYIGYAPVKDPKLAFSIVYTNQPVPPPWLNGGDLGRDIINYYFKNEK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 172813 174858 . + 0 GCA_005502385.1_00698 GCA_005502385.1_00698_gene,GCA_005502385.1_00698_mRNA GCA_005502385.1_00698 Penicillin-binding protein H GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLKRLKEKSNDEKIKHTMNKRISFIFCAIVLIFVLIVLRLGYLQIAQGAHYSQLVKNDENITVNESVPRGRILDRNGKILVDNASKLAITYTRSRKTSQQDMLNTAKKLAKLITMNTDKITKRDKQDFWIQNHPKEVNKLMKKETTMLNNGSISQEQYDKQLHSKITKTQLNSLSKHDLQVLAIYREMSAGSTLDPQMIKNEDVSEKEYAAVSQQLDNLPGVNTSMDWDRKYPYGETLRSIFGSVSTPSEGIPKELTEQYLAKGYSRNDRVGKAYLEYQYEDILRGKKKQLKYTTDKSGKVISSKVINPGSRGNDLQLTIDIDLQKKVESLLENEIKTLRSQGATNMDNALVVVQNPKNGDILAMAGRQIDKKGELLDYDLGNFTGQFAVGSSVKGATLLTGYQNHTIKVGEEMIDEPLHFSGGLTKRSYFNQNGKVLINDKEALMHSSNVYMFKTALRLAGDPYSSGMNLPNNIEEAGQKLRKGLNQVGLGVKTGIDLPNETIGQIEPLTNNPGNYLDLSIGQYDTYTPIQLSQYISTIANNGYRVQPHIGLAIHDATNSDQVGPVKDKIKGNILNKVNNSQDEIDEVKQGFKMAFNEKDGTGYASFHKTVVPSAGKTGTAEVYQNGQPRVNSTYIGYAPVKDPKLAFSIVYTNQPVPPPWLNGGDLGRDIINYYFKNEK persistent 681 Penicillin-binding protein 2 3.4.-.- UniRef50_P83331,UniRef90_A0A8X8KGW1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 174981 175130 . + . GCA_005502385.1_00699_gene GCA_005502385.1_00699 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRVNVTLACTECGDRNYITTKNKRNNPERIEMKKYCSRDNKQTLHRETK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 174981 175130 . + . GCA_005502385.1_00699_mRNA GCA_005502385.1_00699 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRVNVTLACTECGDRNYITTKNKRNNPERIEMKKYCSRDNKQTLHRETK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 174981 175130 . + 0 GCA_005502385.1_00699 GCA_005502385.1_00699_gene,GCA_005502385.1_00699_mRNA GCA_005502385.1_00699 50S ribosomal protein L33 2 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRVNVTLACTECGDRNYITTKNKRNNPERIEMKKYCSRDNKQTLHRETK persistent 49 rpmG 50S ribosomal protein L33 GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:1990904 COG0267,J WP_002449881.1 UPI00019FA954 UniRef100_A0A1L8Y633,UniRef50_Q2FYU6,UniRef90_Q2FYU6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 175341 175892 . + . GCA_005502385.1_00700_gene GCA_005502385.1_00700 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGKKQIRKNILSQMKDFDKKSKHKADIWLMKQLIENEKFKNAHRIGIFLSMPHEINTYNIINFALDNGKQIFVPNTDYRSRNMNFKQLLDLSSIATDDKGINYVNEDTSISNDMDLLIVPGVAFQTNGFRIGYGGGYYDKFLNQHDINSISLIYDFQISDFDVEKHDQPVDNLIICNTKFGRN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 175341 175892 . + . GCA_005502385.1_00700_mRNA GCA_005502385.1_00700 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGKKQIRKNILSQMKDFDKKSKHKADIWLMKQLIENEKFKNAHRIGIFLSMPHEINTYNIINFALDNGKQIFVPNTDYRSRNMNFKQLLDLSSIATDDKGINYVNEDTSISNDMDLLIVPGVAFQTNGFRIGYGGGYYDKFLNQHDINSISLIYDFQISDFDVEKHDQPVDNLIICNTKFGRN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 175341 175892 . + 0 GCA_005502385.1_00700 GCA_005502385.1_00700_gene,GCA_005502385.1_00700_mRNA GCA_005502385.1_00700 putative protein YqgN GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGKKQIRKNILSQMKDFDKKSKHKADIWLMKQLIENEKFKNAHRIGIFLSMPHEINTYNIINFALDNGKQIFVPNTDYRSRNMNFKQLLDLSSIATDDKGINYVNEDTSISNDMDLLIVPGVAFQTNGFRIGYGGGYYDKFLNQHDINSISLIYDFQISDFDVEKHDQPVDNLIICNTKFGRN persistent 183 5-formyltetrahydrofolate cyclo-ligase 6.3.3.2 GO:0006730,GO:0030272 WP_017176231.1 UPI000304B5F8 UniRef100_A0A3S7GXR8,UniRef50_A0A380G6G9,UniRef90_A0A3S7GXR8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 175892 177349 . + . GCA_005502385.1_00701_gene GCA_005502385.1_00701 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNIDKLYWKSIYYWIKYFNYKLEHTDKNTNEIWLFNKKKEELIVFRKEVSSTQEIRFDKSKINDHKENLQKKLGFKIKKVEFFYFLETSMNIDNFDETHPTKLIYHSITNEKDLENTMPNFILKKRVNKKDKKSSLDYKKRVLNTNLVDKYMMIFSPMTYTLIAINVLVWLYMKIYLNHFSDIKLLDVGGLVHFNVVHGEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVETIVGPYKMLGIYLISGLFGNFASLSFNISTISVGASGAIFGLIGAILTMMYLSKTFNKKMIIQLLVVVLILIFVSLFMSNINLMAHLGGFIGGILITLIGYYFHENRNLFWLFLILLLVLFVLLQIRIFSIKEENIYDKLIKDEMISYNYDDALSIVEHTINKGYDDDETYYLKGLITATKSSKAEAMADWERGLRSHPNSALLNYELSIANRALNDNDKSLKYIKKALKIDANNQSYKNLEKELKDSNESKN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 175892 177349 . + . GCA_005502385.1_00701_mRNA GCA_005502385.1_00701 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNIDKLYWKSIYYWIKYFNYKLEHTDKNTNEIWLFNKKKEELIVFRKEVSSTQEIRFDKSKINDHKENLQKKLGFKIKKVEFFYFLETSMNIDNFDETHPTKLIYHSITNEKDLENTMPNFILKKRVNKKDKKSSLDYKKRVLNTNLVDKYMMIFSPMTYTLIAINVLVWLYMKIYLNHFSDIKLLDVGGLVHFNVVHGEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVETIVGPYKMLGIYLISGLFGNFASLSFNISTISVGASGAIFGLIGAILTMMYLSKTFNKKMIIQLLVVVLILIFVSLFMSNINLMAHLGGFIGGILITLIGYYFHENRNLFWLFLILLLVLFVLLQIRIFSIKEENIYDKLIKDEMISYNYDDALSIVEHTINKGYDDDETYYLKGLITATKSSKAEAMADWERGLRSHPNSALLNYELSIANRALNDNDKSLKYIKKALKIDANNQSYKNLEKELKDSNESKN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 175892 177349 . + 0 GCA_005502385.1_00701 GCA_005502385.1_00701_gene,GCA_005502385.1_00701_mRNA GCA_005502385.1_00701 Rhomboid protease GluP GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNIDKLYWKSIYYWIKYFNYKLEHTDKNTNEIWLFNKKKEELIVFRKEVSSTQEIRFDKSKINDHKENLQKKLGFKIKKVEFFYFLETSMNIDNFDETHPTKLIYHSITNEKDLENTMPNFILKKRVNKKDKKSSLDYKKRVLNTNLVDKYMMIFSPMTYTLIAINVLVWLYMKIYLNHFSDIKLLDVGGLVHFNVVHGEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVETIVGPYKMLGIYLISGLFGNFASLSFNISTISVGASGAIFGLIGAILTMMYLSKTFNKKMIIQLLVVVLILIFVSLFMSNINLMAHLGGFIGGILITLIGYYFHENRNLFWLFLILLLVLFVLLQIRIFSIKEENIYDKLIKDEMISYNYDDALSIVEHTINKGYDDDETYYLKGLITATKSSKAEAMADWERGLRSHPNSALLNYELSIANRALNDNDKSLKYIKKALKIDANNQSYKNLEKELKDSNESKN persistent 485 Rhomboid family intramembrane serine protease 3.4.21.105 WP_017176232.1 UPI0002DACA8A UniRef100_A0A3S7GY63,UniRef50_A0A4U9T9N5,UniRef90_A0A3S7GY63 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 177533 178519 . + . GCA_005502385.1_00702_gene GCA_005502385.1_00702 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKNIILAADIGGTTCKLGIFDTKLERLHKWSIETDTSDHTGRTLLRQVFDSFKEATESYHFDLQNVIGVGIGVPGPVDFETGIVHGAVNLHWPGNVNVREIFSEFIDCPVYVDNDANVAALGEKHKGAGQGANDVVAITLGTGLGGGIISNGEIVHGHNGSGAEIGHIRTDFDQRFNCNCGKSGCIETVASATGVVNLVNFYYPKLTFKSSILSLIKENKVTAKAVFDAAKAGDQFCIFITEKVANHIAYLCSIISATSNPKYIVLGGGMSTAGLILIENIKTEYHNLTFTPAQKDTEIVQAKLGNDAGITGAAGLIKTYIIEKDGVK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 177533 178519 . + . GCA_005502385.1_00702_mRNA GCA_005502385.1_00702 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKNIILAADIGGTTCKLGIFDTKLERLHKWSIETDTSDHTGRTLLRQVFDSFKEATESYHFDLQNVIGVGIGVPGPVDFETGIVHGAVNLHWPGNVNVREIFSEFIDCPVYVDNDANVAALGEKHKGAGQGANDVVAITLGTGLGGGIISNGEIVHGHNGSGAEIGHIRTDFDQRFNCNCGKSGCIETVASATGVVNLVNFYYPKLTFKSSILSLIKENKVTAKAVFDAAKAGDQFCIFITEKVANHIAYLCSIISATSNPKYIVLGGGMSTAGLILIENIKTEYHNLTFTPAQKDTEIVQAKLGNDAGITGAAGLIKTYIIEKDGVK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 177533 178519 . + 0 GCA_005502385.1_00702 GCA_005502385.1_00702_gene,GCA_005502385.1_00702_mRNA GCA_005502385.1_00702 Glucokinase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKNIILAADIGGTTCKLGIFDTKLERLHKWSIETDTSDHTGRTLLRQVFDSFKEATESYHFDLQNVIGVGIGVPGPVDFETGIVHGAVNLHWPGNVNVREIFSEFIDCPVYVDNDANVAALGEKHKGAGQGANDVVAITLGTGLGGGIISNGEIVHGHNGSGAEIGHIRTDFDQRFNCNCGKSGCIETVASATGVVNLVNFYYPKLTFKSSILSLIKENKVTAKAVFDAAKAGDQFCIFITEKVANHIAYLCSIISATSNPKYIVLGGGMSTAGLILIENIKTEYHNLTFTPAQKDTEIVQAKLGNDAGITGAAGLIKTYIIEKDGVK persistent 328 Glucokinase WP_002449785.1 UPI00019FA950 UniRef100_A0A1L8Y7E4,UniRef50_Q56198,UniRef90_A0A380G000 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 178519 178842 . + . GCA_005502385.1_00703_gene GCA_005502385.1_00703 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAIIDVVVIPVGTEGPSVSKYIAEIQTKLEAFKKQGKIDYQLTPMNTLIEGDLKDLFEVVQAIHELPFDKGLDRVCTNIRIDDRRDKSRKMNDKLKSVQKHLDKQGE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 178519 178842 . + . GCA_005502385.1_00703_mRNA GCA_005502385.1_00703 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAIIDVVVIPVGTEGPSVSKYIAEIQTKLEAFKKQGKIDYQLTPMNTLIEGDLKDLFEVVQAIHELPFDKGLDRVCTNIRIDDRRDKSRKMNDKLKSVQKHLDKQGE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 178519 178842 . + 0 GCA_005502385.1_00703 GCA_005502385.1_00703_gene,GCA_005502385.1_00703_mRNA GCA_005502385.1_00703 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAIIDVVVIPVGTEGPSVSKYIAEIQTKLEAFKKQGKIDYQLTPMNTLIEGDLKDLFEVVQAIHELPFDKGLDRVCTNIRIDDRRDKSRKMNDKLKSVQKHLDKQGE persistent 107 yqgV Thiamine-binding protein domain-containing protein COG0011,H WP_017176234.1 UPI00031739E0 UniRef100_A0A4Q9WV83,UniRef50_Q56200,UniRef90_A0A853V3R2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 178844 179470 . + . GCA_005502385.1_00704_gene GCA_005502385.1_00704 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRISNLSLGLVDTNAYFVESDNSVLLVDPAGESDKIFKKLNQINKPLKAILLTHAHFDHIGALDDVLSKYDVPVYMHKEEFSFLTDPEKNGSSKFKQYGMPLTTSKAQPIALDEGNFTIDEFKFNVLHTPGHSPGSLTYVFDDFAVVGDTLFNNGIGRTDLYRGDYETLVDSIKDKLFELDGDLPLFPGHGQYTTVDDEQLNPYLDGQ . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 178844 179470 . + . GCA_005502385.1_00704_mRNA GCA_005502385.1_00704 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRISNLSLGLVDTNAYFVESDNSVLLVDPAGESDKIFKKLNQINKPLKAILLTHAHFDHIGALDDVLSKYDVPVYMHKEEFSFLTDPEKNGSSKFKQYGMPLTTSKAQPIALDEGNFTIDEFKFNVLHTPGHSPGSLTYVFDDFAVVGDTLFNNGIGRTDLYRGDYETLVDSIKDKLFELDGDLPLFPGHGQYTTVDDEQLNPYLDGQ . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 178844 179470 . + 0 GCA_005502385.1_00704 GCA_005502385.1_00704_gene,GCA_005502385.1_00704_mRNA GCA_005502385.1_00704 putative metallo-hydrolase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRISNLSLGLVDTNAYFVESDNSVLLVDPAGESDKIFKKLNQINKPLKAILLTHAHFDHIGALDDVLSKYDVPVYMHKEEFSFLTDPEKNGSSKFKQYGMPLTTSKAQPIALDEGNFTIDEFKFNVLHTPGHSPGSLTYVFDDFAVVGDTLFNNGIGRTDLYRGDYETLVDSIKDKLFELDGDLPLFPGHGQYTTVDDEQLNPYLDGQ persistent 208 MBL fold metallo-hydrolase WP_017176235.1 UPI0002FB0FFC UniRef100_A0A4Q9WSQ3,UniRef50_Q2FY29,UniRef90_A0A657M2G9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 179522 180496 . + . GCA_005502385.1_00705_gene GCA_005502385.1_00705 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKLLFQEIINKAISKNASDVHFIPSEDKVHIKFRVNDILETYEMFSNDIYEKLLIYMKFKANLDVSTHQIAQSGRYTYHAKSIFYLRISTLPLSLGVESCVIRLIPQYFTSKREYKDFNDFKPLMNKKQGLILLTGPTGSGKSTLMYQLVLYAFQELNLNVITIENPVEQLLKGITQVSVNHKAGIDYVSSFKAILRCDPDVILIGEIRDAEVAKCVIQASLSGHLVLTTMHSSNCKGAILRLLEMGISVQEISQAINVISNQRLVTTTSNQRKLVCESITNNQIQYFFEHNHTLPKTFNNLKEKLLSLSKEGLICEDVVEKYI . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 179522 180496 . + . GCA_005502385.1_00705_mRNA GCA_005502385.1_00705 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKLLFQEIINKAISKNASDVHFIPSEDKVHIKFRVNDILETYEMFSNDIYEKLLIYMKFKANLDVSTHQIAQSGRYTYHAKSIFYLRISTLPLSLGVESCVIRLIPQYFTSKREYKDFNDFKPLMNKKQGLILLTGPTGSGKSTLMYQLVLYAFQELNLNVITIENPVEQLLKGITQVSVNHKAGIDYVSSFKAILRCDPDVILIGEIRDAEVAKCVIQASLSGHLVLTTMHSSNCKGAILRLLEMGISVQEISQAINVISNQRLVTTTSNQRKLVCESITNNQIQYFFEHNHTLPKTFNNLKEKLLSLSKEGLICEDVVEKYI . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 179522 180496 . + 0 GCA_005502385.1_00705 GCA_005502385.1_00705_gene,GCA_005502385.1_00705_mRNA GCA_005502385.1_00705 ComG operon protein 1 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKLLFQEIINKAISKNASDVHFIPSEDKVHIKFRVNDILETYEMFSNDIYEKLLIYMKFKANLDVSTHQIAQSGRYTYHAKSIFYLRISTLPLSLGVESCVIRLIPQYFTSKREYKDFNDFKPLMNKKQGLILLTGPTGSGKSTLMYQLVLYAFQELNLNVITIENPVEQLLKGITQVSVNHKAGIDYVSSFKAILRCDPDVILIGEIRDAEVAKCVIQASLSGHLVLTTMHSSNCKGAILRLLEMGISVQEISQAINVISNQRLVTTTSNQRKLVCESITNNQIQYFFEHNHTLPKTFNNLKEKLLSLSKEGLICEDVVEKYI persistent 324 comGA competence type IV pilus ATPase ComGA WP_019835698.1 UPI00036F150E UniRef100_UPI00036F150E,UniRef50_Q2FY30,UniRef90_A0A3S7H141 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 180468 181532 . + . GCA_005502385.1_00706_gene GCA_005502385.1_00706 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKMWLKNIFNKHSKVLNENQQIILLNNLNNLLKSGFTLLESFNFINLYFNYKNKDIANKIVKIIKTGGECDQILELIGYPKSIITQIQFAQKYGNINEALEEAMNYLKTNLQAKQRILKAIQYPIILIAIFITMLSILNYTVLPQFEHLYSMMDVKLNLSQTIITYLISHLPQIFLFVFFTLLTLSIIIFIFLNKLDISKKLTFISYIPIVRFYYSTIKTYQLANDLALFYKNGISIQQVVDMYIHLQNNSFLNYIGIVIQNELNRGINLPNILIKIPCYQYDLIQFIKQGEKNNKLDIELKMYCQILIQRLQQTALKQSKIIQPIVFIFLGAFIVSLYLVIMLPMFQLMQNIK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 180468 181532 . + . GCA_005502385.1_00706_mRNA GCA_005502385.1_00706 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKMWLKNIFNKHSKVLNENQQIILLNNLNNLLKSGFTLLESFNFINLYFNYKNKDIANKIVKIIKTGGECDQILELIGYPKSIITQIQFAQKYGNINEALEEAMNYLKTNLQAKQRILKAIQYPIILIAIFITMLSILNYTVLPQFEHLYSMMDVKLNLSQTIITYLISHLPQIFLFVFFTLLTLSIIIFIFLNKLDISKKLTFISYIPIVRFYYSTIKTYQLANDLALFYKNGISIQQVVDMYIHLQNNSFLNYIGIVIQNELNRGINLPNILIKIPCYQYDLIQFIKQGEKNNKLDIELKMYCQILIQRLQQTALKQSKIIQPIVFIFLGAFIVSLYLVIMLPMFQLMQNIK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 180468 181532 . + 0 GCA_005502385.1_00706 GCA_005502385.1_00706_gene,GCA_005502385.1_00706_mRNA GCA_005502385.1_00706 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKMWLKNIFNKHSKVLNENQQIILLNNLNNLLKSGFTLLESFNFINLYFNYKNKDIANKIVKIIKTGGECDQILELIGYPKSIITQIQFAQKYGNINEALEEAMNYLKTNLQAKQRILKAIQYPIILIAIFITMLSILNYTVLPQFEHLYSMMDVKLNLSQTIITYLISHLPQIFLFVFFTLLTLSIIIFIFLNKLDISKKLTFISYIPIVRFYYSTIKTYQLANDLALFYKNGISIQQVVDMYIHLQNNSFLNYIGIVIQNELNRGINLPNILIKIPCYQYDLIQFIKQGEKNNKLDIELKMYCQILIQRLQQTALKQSKIIQPIVFIFLGAFIVSLYLVIMLPMFQLMQNIK persistent 354 comGB competence type IV pilus assembly protein ComGB WP_017176237.1 UPI0003650A30 UniRef100_UPI0003650A30,UniRef50_Q4L6P3,UniRef90_A0A974KWI2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 181552 181863 . + . GCA_005502385.1_00707_gene GCA_005502385.1_00707 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKFKNKLKAFTLIEMLLVLLIISVLLILIIPNIAKQMSHIQSTGCEAQVKMVNSQIEAYTLKHNRVPNSIEDLVTEGFIKQGQSSCKSGETISIKNGEAVAE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 181552 181863 . + . GCA_005502385.1_00707_mRNA GCA_005502385.1_00707 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKFKNKLKAFTLIEMLLVLLIISVLLILIIPNIAKQMSHIQSTGCEAQVKMVNSQIEAYTLKHNRVPNSIEDLVTEGFIKQGQSSCKSGETISIKNGEAVAE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 181552 181863 . + 0 GCA_005502385.1_00707 GCA_005502385.1_00707_gene,GCA_005502385.1_00707_mRNA GCA_005502385.1_00707 ComG operon protein 3 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKFKNKLKAFTLIEMLLVLLIISVLLILIIPNIAKQMSHIQSTGCEAQVKMVNSQIEAYTLKHNRVPNSIEDLVTEGFIKQGQSSCKSGETISIKNGEAVAE persistent 103 comGC competence type IV pilus major pilin ComGC GO:0030420 WP_017176238.1 UPI0002F23758 UniRef100_A0A4Q9WRW5,UniRef50_A0A380G8S0,UniRef90_A0A4Q9WRW5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 181853 182287 . + . GCA_005502385.1_00708_gene GCA_005502385.1_00708 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQSKNIKAFTFIESLLIILILTILLNATLRVNVFNNISLSDDLKATQFVNQLEYFKSKAMHDHQSITLLISKHSSIIKVIEAHGGRYNYNIEDGKIVEVRNLEKITFNKEGRINQFGSLILKINQHQYKLIINIEKGRIRYFKI . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 181853 182287 . + . GCA_005502385.1_00708_mRNA GCA_005502385.1_00708 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQSKNIKAFTFIESLLIILILTILLNATLRVNVFNNISLSDDLKATQFVNQLEYFKSKAMHDHQSITLLISKHSSIIKVIEAHGGRYNYNIEDGKIVEVRNLEKITFNKEGRINQFGSLILKINQHQYKLIINIEKGRIRYFKI . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 181853 182287 . + 0 GCA_005502385.1_00708 GCA_005502385.1_00708_gene,GCA_005502385.1_00708_mRNA GCA_005502385.1_00708 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQSKNIKAFTFIESLLIILILTILLNATLRVNVFNNISLSDDLKATQFVNQLEYFKSKAMHDHQSITLLISKHSSIIKVIEAHGGRYNYNIEDGKIVEVRNLEKITFNKEGRINQFGSLILKINQHQYKLIINIEKGRIRYFKI persistent 144 comGD competence type IV pilus minor pilin ComGD WP_017176239.1 UPI000318E20C UniRef100_A0A8X8GVP2,UniRef50_A0A4Z1BHY4,UniRef90_A0A974KWP5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 182479 182976 . + . GCA_005502385.1_00709_gene GCA_005502385.1_00709 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIIILNFIPTKYVDFTKKLKSNHALNIKLKSFTLIEMLVSLFLTTMMLTFFPQLIKLTHSYLYESYNSYQTEYAFFQTNITQIISKKHHALIIKDKHTIIIDNESSKDYIEFKNNKLFYKINGNGNIVLLNNVINAEFQILPSNIIKLKLKIGDKNDYYEKNLFL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 182479 182976 . + . GCA_005502385.1_00709_mRNA GCA_005502385.1_00709 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIIILNFIPTKYVDFTKKLKSNHALNIKLKSFTLIEMLVSLFLTTMMLTFFPQLIKLTHSYLYESYNSYQTEYAFFQTNITQIISKKHHALIIKDKHTIIIDNESSKDYIEFKNNKLFYKINGNGNIVLLNNVINAEFQILPSNIIKLKLKIGDKNDYYEKNLFL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 182479 182976 . + 0 GCA_005502385.1_00709 GCA_005502385.1_00709_gene,GCA_005502385.1_00709_mRNA GCA_005502385.1_00709 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIIILNFIPTKYVDFTKKLKSNHALNIKLKSFTLIEMLVSLFLTTMMLTFFPQLIKLTHSYLYESYNSYQTEYAFFQTNITQIISKKHHALIIKDKHTIIIDNESSKDYIEFKNNKLFYKINGNGNIVLLNNVINAEFQILPSNIIKLKLKIGDKNDYYEKNLFL persistent 165 comG Competence protein ComG WP_017176240.1 UPI0002EAEB98 UniRef100_A0A4Q9WU27,UniRef50_A0A4Q9WU27,UniRef90_A0A4Q9WU27 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 183141 183650 . + . GCA_005502385.1_00710_gene GCA_005502385.1_00710 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTHSYLPLILTGFMGTGKSTIGKYLASKLHYSYIDLDTYIEMKEFKTIPDIFNEIGEKGFRKLEYKYLNDCIGKYDIISTGGGIIENDNSISLLKNKTVIWLDCDIDIIYNRIANDPHRPNAKNKSEKQLKDLYLSRVSRYNEIASKKVDSSKTIECVYKTILNHIPCE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 183141 183650 . + . GCA_005502385.1_00710_mRNA GCA_005502385.1_00710 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTHSYLPLILTGFMGTGKSTIGKYLASKLHYSYIDLDTYIEMKEFKTIPDIFNEIGEKGFRKLEYKYLNDCIGKYDIISTGGGIIENDNSISLLKNKTVIWLDCDIDIIYNRIANDPHRPNAKNKSEKQLKDLYLSRVSRYNEIASKKVDSSKTIECVYKTILNHIPCE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 183141 183650 . + 0 GCA_005502385.1_00710 GCA_005502385.1_00710_gene,GCA_005502385.1_00710_mRNA GCA_005502385.1_00710 Shikimate kinase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTHSYLPLILTGFMGTGKSTIGKYLASKLHYSYIDLDTYIEMKEFKTIPDIFNEIGEKGFRKLEYKYLNDCIGKYDIISTGGGIIENDNSISLLKNKTVIWLDCDIDIIYNRIANDPHRPNAKNKSEKQLKDLYLSRVSRYNEIASKKVDSSKTIECVYKTILNHIPCE persistent 169 Shikimate kinase WP_017176242.1 UPI0002FD1644 UniRef100_A0A8X8GHA0,UniRef50_Q5HP11,UniRef90_A0A657M442 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 183647 183768 . + . GCA_005502385.1_00711_gene GCA_005502385.1_00711 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 183647 183768 . + . GCA_005502385.1_00711_mRNA GCA_005502385.1_00711 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 Infernal:001001 misc_RNA 183647 183768 63.8 + . GCA_005502385.1_00711 GCA_005502385.1_00711_gene,GCA_005502385.1_00711_mRNA GCA_005502385.1_00711 Glycine GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 183845 184936 . + . GCA_005502385.1_00712_gene GCA_005502385.1_00712 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTNELKKTPLYETYVNSGAKIVEFGGWAMPVQFTSIKEEHNAVRYKVGMFDVSHMGEILIEGENASKFVQYLLSNDTTNLSETKAQYTALCNDEGGIIDDLVTYKIADNKYLLIVNAANTDKDFEWIQKHQSKFNATVTNVSEQYGQLAVQGPQARTLVSELVDIDVSEMKPFEFKQNVTIFGKNVILSQSGYTGEDGFEIYCNSNDTVDIWNGFIDKGVVPCGLGARDTLRLEAGLPLHGQDLTESITPYEGGIAFAAKPLIEDEFIGKSVLKDQKENGSKRRTVGLELIDKGIARTGYTVMNLDGKEIGEITSGTQSPSSGKSIAMAIIDRDEFELGKELLVQVRKRQLKAKIVKKNQIEK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 183845 184936 . + . GCA_005502385.1_00712_mRNA GCA_005502385.1_00712 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTNELKKTPLYETYVNSGAKIVEFGGWAMPVQFTSIKEEHNAVRYKVGMFDVSHMGEILIEGENASKFVQYLLSNDTTNLSETKAQYTALCNDEGGIIDDLVTYKIADNKYLLIVNAANTDKDFEWIQKHQSKFNATVTNVSEQYGQLAVQGPQARTLVSELVDIDVSEMKPFEFKQNVTIFGKNVILSQSGYTGEDGFEIYCNSNDTVDIWNGFIDKGVVPCGLGARDTLRLEAGLPLHGQDLTESITPYEGGIAFAAKPLIEDEFIGKSVLKDQKENGSKRRTVGLELIDKGIARTGYTVMNLDGKEIGEITSGTQSPSSGKSIAMAIIDRDEFELGKELLVQVRKRQLKAKIVKKNQIEK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 183845 184936 . + 0 GCA_005502385.1_00712 GCA_005502385.1_00712_gene,GCA_005502385.1_00712_mRNA GCA_005502385.1_00712 Aminomethyltransferase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTNELKKTPLYETYVNSGAKIVEFGGWAMPVQFTSIKEEHNAVRYKVGMFDVSHMGEILIEGENASKFVQYLLSNDTTNLSETKAQYTALCNDEGGIIDDLVTYKIADNKYLLIVNAANTDKDFEWIQKHQSKFNATVTNVSEQYGQLAVQGPQARTLVSELVDIDVSEMKPFEFKQNVTIFGKNVILSQSGYTGEDGFEIYCNSNDTVDIWNGFIDKGVVPCGLGARDTLRLEAGLPLHGQDLTESITPYEGGIAFAAKPLIEDEFIGKSVLKDQKENGSKRRTVGLELIDKGIARTGYTVMNLDGKEIGEITSGTQSPSSGKSIAMAIIDRDEFELGKELLVQVRKRQLKAKIVKKNQIEK persistent 363 gcvT glycine cleavage system aminomethyltransferase GcvT 2.1.2.10 GO:0004047,GO:0005737,GO:0019464 WP_017176243.1 UPI0002F1C0B2 UniRef100_A0A3S7GY29,UniRef50_Q2FY33,UniRef90_A0A657M489 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 184953 186305 . + . GCA_005502385.1_00713_gene GCA_005502385.1_00713 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSHRYIPLTDKDKKEMLETIGANSITELFGDIPKDILLNRDLNIDSAEAETSLLRRLNTIANKNITKETHVSFLGAGVYDHYTPAVVDAMISRSEFYTAYTPYQPEISQGELQAIFEFQTLICELTQMDVANSSMYDGITSFAEACILAFNHTKKNKIVVSKGLHYQALQVLKTYIKVRKEFEIVEVDLNGTITDLEKLEQAIDDDTAAVAVQYPNFYGSIEDLEKIHSYIENKKALFIVYSNPLALGVLTPPGQFGADIVVGDTQPFGIPTQFGGPHCGYFATTKKLMRKVPGRLVGQTQDDEGNRGFVLTLQAREQHIRRDKATSNICSNQALNALASSIAMSALGKQGIYDIAVQNLEHANYAKNQFKNNGFEVLDGTSFNEFVVKFNQPIKDVNKKLAEHGFIGGFDLGEASSDFDNYMLIAVTELRTKEEIDTFVEKAGELNGSK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 184953 186305 . + . GCA_005502385.1_00713_mRNA GCA_005502385.1_00713 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSHRYIPLTDKDKKEMLETIGANSITELFGDIPKDILLNRDLNIDSAEAETSLLRRLNTIANKNITKETHVSFLGAGVYDHYTPAVVDAMISRSEFYTAYTPYQPEISQGELQAIFEFQTLICELTQMDVANSSMYDGITSFAEACILAFNHTKKNKIVVSKGLHYQALQVLKTYIKVRKEFEIVEVDLNGTITDLEKLEQAIDDDTAAVAVQYPNFYGSIEDLEKIHSYIENKKALFIVYSNPLALGVLTPPGQFGADIVVGDTQPFGIPTQFGGPHCGYFATTKKLMRKVPGRLVGQTQDDEGNRGFVLTLQAREQHIRRDKATSNICSNQALNALASSIAMSALGKQGIYDIAVQNLEHANYAKNQFKNNGFEVLDGTSFNEFVVKFNQPIKDVNKKLAEHGFIGGFDLGEASSDFDNYMLIAVTELRTKEEIDTFVEKAGELNGSK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 184953 186305 . + 0 GCA_005502385.1_00713 GCA_005502385.1_00713_gene,GCA_005502385.1_00713_mRNA GCA_005502385.1_00713 putative glycine dehydrogenase (decarboxylating) subunit 1 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSHRYIPLTDKDKKEMLETIGANSITELFGDIPKDILLNRDLNIDSAEAETSLLRRLNTIANKNITKETHVSFLGAGVYDHYTPAVVDAMISRSEFYTAYTPYQPEISQGELQAIFEFQTLICELTQMDVANSSMYDGITSFAEACILAFNHTKKNKIVVSKGLHYQALQVLKTYIKVRKEFEIVEVDLNGTITDLEKLEQAIDDDTAAVAVQYPNFYGSIEDLEKIHSYIENKKALFIVYSNPLALGVLTPPGQFGADIVVGDTQPFGIPTQFGGPHCGYFATTKKLMRKVPGRLVGQTQDDEGNRGFVLTLQAREQHIRRDKATSNICSNQALNALASSIAMSALGKQGIYDIAVQNLEHANYAKNQFKNNGFEVLDGTSFNEFVVKFNQPIKDVNKKLAEHGFIGGFDLGEASSDFDNYMLIAVTELRTKEEIDTFVEKAGELNGSK persistent 450 gcvPA aminomethyl-transferring glycine dehydrogenase subunit GcvPA 1.4.4.2 GO:0004375,GO:0006546,GO:0009116,GO:0019464 COG0403,E WP_017176244.1 UPI0002F2F030 UniRef100_A0A4Q9WRW7,UniRef50_Q81M07,UniRef90_Q4L6N6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 186292 187770 . + . GCA_005502385.1_00714_gene GCA_005502385.1_00714 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVVSKSSPLIFERSREGRYAYSLPQSDIKTDSVESILDDKFIRKNKAEFPEVAELDLVRHYTELSNKNFGVDSGFYPLGSCTMKYNPKINEKVARISGFAESHPLQEEEQIQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHIKNGEGHRNEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVDIEDLKRVVNENTAAIMLTNPNTLGIFEKNIMDIREIVHEAGGLLYYDGANLNAIMDKVRPGDMGFDAVHLNLHKTFTGPHGGGGPGSGPVGVKKELASYLPKPMVIKDGDTFKYDNDIENSIGRVKPFYGNFGIYLRAYTYIRTMGAQGLKEVSEAAVLNANYIKARLKDRYEIPYEQYCKHEFVLSGSKQKEYGVRTLDMAKRLLDFGVHPPTIYFPLNVEEGMMIEPTETESKETLDYFIDAMLQIADEVESDPDKVLEAPHTTIIDRLDETTAARKPILKFEDLHQEKL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 186292 187770 . + . GCA_005502385.1_00714_mRNA GCA_005502385.1_00714 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVVSKSSPLIFERSREGRYAYSLPQSDIKTDSVESILDDKFIRKNKAEFPEVAELDLVRHYTELSNKNFGVDSGFYPLGSCTMKYNPKINEKVARISGFAESHPLQEEEQIQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHIKNGEGHRNEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVDIEDLKRVVNENTAAIMLTNPNTLGIFEKNIMDIREIVHEAGGLLYYDGANLNAIMDKVRPGDMGFDAVHLNLHKTFTGPHGGGGPGSGPVGVKKELASYLPKPMVIKDGDTFKYDNDIENSIGRVKPFYGNFGIYLRAYTYIRTMGAQGLKEVSEAAVLNANYIKARLKDRYEIPYEQYCKHEFVLSGSKQKEYGVRTLDMAKRLLDFGVHPPTIYFPLNVEEGMMIEPTETESKETLDYFIDAMLQIADEVESDPDKVLEAPHTTIIDRLDETTAARKPILKFEDLHQEKL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 186292 187770 . + 0 GCA_005502385.1_00714 GCA_005502385.1_00714_gene,GCA_005502385.1_00714_mRNA GCA_005502385.1_00714 putative glycine dehydrogenase (decarboxylating) subunit 2 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVVSKSSPLIFERSREGRYAYSLPQSDIKTDSVESILDDKFIRKNKAEFPEVAELDLVRHYTELSNKNFGVDSGFYPLGSCTMKYNPKINEKVARISGFAESHPLQEEEQIQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHIKNGEGHRNEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVDIEDLKRVVNENTAAIMLTNPNTLGIFEKNIMDIREIVHEAGGLLYYDGANLNAIMDKVRPGDMGFDAVHLNLHKTFTGPHGGGGPGSGPVGVKKELASYLPKPMVIKDGDTFKYDNDIENSIGRVKPFYGNFGIYLRAYTYIRTMGAQGLKEVSEAAVLNANYIKARLKDRYEIPYEQYCKHEFVLSGSKQKEYGVRTLDMAKRLLDFGVHPPTIYFPLNVEEGMMIEPTETESKETLDYFIDAMLQIADEVESDPDKVLEAPHTTIIDRLDETTAARKPILKFEDLHQEKL persistent 492 gcvPB aminomethyl-transferring glycine dehydrogenase subunit GcvPB 1.4.4.2 GO:0004375,GO:0005829,GO:0005960,GO:0006546,GO:0016594,GO:0019464,GO:0030170 COG1003,E WP_017176245.1 UPI0002EDF59E UniRef100_A0A3S7GY86,UniRef50_P54377,UniRef90_Q2FY35 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 187855 188241 . - . GCA_005502385.1_00715_gene GCA_005502385.1_00715 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNVSLIIALIIIVLIILYMVGNFFLNRRAVTELDQNEFHKGLRKAQVIDVREKVDYDYGHINGARNIPISMFRQRFQGLRKDQPVYLCDANGIASYRAARILKKNGYKDLYMLKGGYKKWTGKIKTKK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 187855 188241 . - . GCA_005502385.1_00715_mRNA GCA_005502385.1_00715 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNVSLIIALIIIVLIILYMVGNFFLNRRAVTELDQNEFHKGLRKAQVIDVREKVDYDYGHINGARNIPISMFRQRFQGLRKDQPVYLCDANGIASYRAARILKKNGYKDLYMLKGGYKKWTGKIKTKK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 187855 188241 . - 0 GCA_005502385.1_00715 GCA_005502385.1_00715_gene,GCA_005502385.1_00715_mRNA GCA_005502385.1_00715 putative protein YibN GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNVSLIIALIIIVLIILYMVGNFFLNRRAVTELDQNEFHKGLRKAQVIDVREKVDYDYGHINGARNIPISMFRQRFQGLRKDQPVYLCDANGIASYRAARILKKNGYKDLYMLKGGYKKWTGKIKTKK persistent 128 Rhodanese-like domain-containing protein WP_002449897.1 UPI00019FA944 UniRef100_A0A1L8Y7C5,UniRef50_Q2FY36,UniRef90_A0A1L8Y7C5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 188392 189222 . + . GCA_005502385.1_00716_gene GCA_005502385.1_00716 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTETWNFINTGSHDPYYNMAMDEALLNFVSRGEIDPVVRFYTWNPATLSVGYFQRLKKEIDIDKVKEKGFGLVRRQTGGRGVLHDKELTYSVIVPESHPNMPSTITEAYRVISEGLLEGFKLLGFDAYFAIPRSKEEREKLKQPRSAVCFDAPSWYELVVEGRKIAGSAQTRQKGVILQHGSLLQDVDVDELFDMFIFKNDRLKEKMKKAFVDKAVAINDISDRHISIEEMEKAFEEGFKKGLNIEFKPLSLTENQLAEVKVLEEKYRSEEWLYKK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 188392 189222 . + . GCA_005502385.1_00716_mRNA GCA_005502385.1_00716 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTETWNFINTGSHDPYYNMAMDEALLNFVSRGEIDPVVRFYTWNPATLSVGYFQRLKKEIDIDKVKEKGFGLVRRQTGGRGVLHDKELTYSVIVPESHPNMPSTITEAYRVISEGLLEGFKLLGFDAYFAIPRSKEEREKLKQPRSAVCFDAPSWYELVVEGRKIAGSAQTRQKGVILQHGSLLQDVDVDELFDMFIFKNDRLKEKMKKAFVDKAVAINDISDRHISIEEMEKAFEEGFKKGLNIEFKPLSLTENQLAEVKVLEEKYRSEEWLYKK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 188392 189222 . + 0 GCA_005502385.1_00716 GCA_005502385.1_00716_gene,GCA_005502385.1_00716_mRNA GCA_005502385.1_00716 Octanoyltransferase LipM GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTETWNFINTGSHDPYYNMAMDEALLNFVSRGEIDPVVRFYTWNPATLSVGYFQRLKKEIDIDKVKEKGFGLVRRQTGGRGVLHDKELTYSVIVPESHPNMPSTITEAYRVISEGLLEGFKLLGFDAYFAIPRSKEEREKLKQPRSAVCFDAPSWYELVVEGRKIAGSAQTRQKGVILQHGSLLQDVDVDELFDMFIFKNDRLKEKMKKAFVDKAVAINDISDRHISIEEMEKAFEEGFKKGLNIEFKPLSLTENQLAEVKVLEEKYRSEEWLYKK persistent 276 lplA Octanoyltransferase LipM COG0095,H WP_017176246.1 UPI00031A33EE UniRef100_A0A4V6MZH3,UniRef50_P54511,UniRef90_A0A2A1KAJ3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 189506 190087 . - . GCA_005502385.1_00717_gene GCA_005502385.1_00717 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKRLLTILGASLFLVGCGSQNLGPLEDKTTNLRDENHNLKLKIQQLNQDINNQKSQLEALNKDKKNVSKTVDNNNEANFLQASSNYYQDIAKIIDKFNQLDLNKTKKDDKNQNLEKLNSLSNDIDDAYSKYKSDTDKSNISNDNTNEDKTIKQINKNLQSAFKDIKNGYESNNKKKINQGKMKLSQINVSSSS . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 189506 190087 . - . GCA_005502385.1_00717_mRNA GCA_005502385.1_00717 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKRLLTILGASLFLVGCGSQNLGPLEDKTTNLRDENHNLKLKIQQLNQDINNQKSQLEALNKDKKNVSKTVDNNNEANFLQASSNYYQDIAKIIDKFNQLDLNKTKKDDKNQNLEKLNSLSNDIDDAYSKYKSDTDKSNISNDNTNEDKTIKQINKNLQSAFKDIKNGYESNNKKKINQGKMKLSQINVSSSS . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 189506 190087 . - 0 GCA_005502385.1_00717 GCA_005502385.1_00717_gene,GCA_005502385.1_00717_mRNA GCA_005502385.1_00717 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKRLLTILGASLFLVGCGSQNLGPLEDKTTNLRDENHNLKLKIQQLNQDINNQKSQLEALNKDKKNVSKTVDNNNEANFLQASSNYYQDIAKIIDKFNQLDLNKTKKDDKNQNLEKLNSLSNDIDDAYSKYKSDTDKSNISNDNTNEDKTIKQINKNLQSAFKDIKNGYESNNKKKINQGKMKLSQINVSSSS persistent 193 Lipoprotein WP_017176248.1 UPI0002ED021E UniRef100_A0A4Q9WRW1,UniRef50_A0A2A1KCH6,UniRef90_A0AAE5JMM8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 190188 191246 . + . GCA_005502385.1_00718_gene GCA_005502385.1_00718 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDKLAKVRHILKSENLDALVILSDYNRRYISDFTGTSGALIISNNENKLITDFRYIEQATNQATHFEIVNRRSGIIDEIKEIIKNKQYKTVGFEGHLVSYDTFQELSQIDTKYVSIGNAIEKIREIKSPEEIAKIKYAAKIVDDTYNYILNIAKVGMTERELKALLESKMLELGADGPSFDTIVASGYRGALPHGVASDKVIEKGDMITLDFGAYYRGYCSDITRTFAIGEPDKKLKEIYNIVLQSQIKAIEEIKPGMTTKEADALSRDYIKAHGYGNEFGHSLGHGIGLDIHEGPVLSKNTNDTVQVNNCVTIEPGIYVDGLGGVRIEDDILITENGCEVFTKCTKDLIIL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 190188 191246 . + . GCA_005502385.1_00718_mRNA GCA_005502385.1_00718 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDKLAKVRHILKSENLDALVILSDYNRRYISDFTGTSGALIISNNENKLITDFRYIEQATNQATHFEIVNRRSGIIDEIKEIIKNKQYKTVGFEGHLVSYDTFQELSQIDTKYVSIGNAIEKIREIKSPEEIAKIKYAAKIVDDTYNYILNIAKVGMTERELKALLESKMLELGADGPSFDTIVASGYRGALPHGVASDKVIEKGDMITLDFGAYYRGYCSDITRTFAIGEPDKKLKEIYNIVLQSQIKAIEEIKPGMTTKEADALSRDYIKAHGYGNEFGHSLGHGIGLDIHEGPVLSKNTNDTVQVNNCVTIEPGIYVDGLGGVRIEDDILITENGCEVFTKCTKDLIIL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 190188 191246 . + 0 GCA_005502385.1_00718 GCA_005502385.1_00718_gene,GCA_005502385.1_00718_mRNA GCA_005502385.1_00718 Aminopeptidase YpdF GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDKLAKVRHILKSENLDALVILSDYNRRYISDFTGTSGALIISNNENKLITDFRYIEQATNQATHFEIVNRRSGIIDEIKEIIKNKQYKTVGFEGHLVSYDTFQELSQIDTKYVSIGNAIEKIREIKSPEEIAKIKYAAKIVDDTYNYILNIAKVGMTERELKALLESKMLELGADGPSFDTIVASGYRGALPHGVASDKVIEKGDMITLDFGAYYRGYCSDITRTFAIGEPDKKLKEIYNIVLQSQIKAIEEIKPGMTTKEADALSRDYIKAHGYGNEFGHSLGHGIGLDIHEGPVLSKNTNDTVQVNNCVTIEPGIYVDGLGGVRIEDDILITENGCEVFTKCTKDLIIL persistent 352 Peptidase M24 3.4.11.9 UniRef50_A0A0D6XTL2,UniRef90_A0A3S7H0Q5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 191274 191831 . + . GCA_005502385.1_00719_gene GCA_005502385.1_00719 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MISVNDFKTGLTISVDNGIWKVIDFQHVKPGKGSAFVRSKLRNLRTGAIQEKTFRAGEKVEQAMIENRRMQYLYADGDTHVFMDNETFDQTELSGDYLKDELKYLKANMEVQIQSYEGETIGIELPKTVELEVTETEPGIKGDTATGATKSATVETGYTLNVPLFVNEGDVLVINTSDGSYISRA . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 191274 191831 . + . GCA_005502385.1_00719_mRNA GCA_005502385.1_00719 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MISVNDFKTGLTISVDNGIWKVIDFQHVKPGKGSAFVRSKLRNLRTGAIQEKTFRAGEKVEQAMIENRRMQYLYADGDTHVFMDNETFDQTELSGDYLKDELKYLKANMEVQIQSYEGETIGIELPKTVELEVTETEPGIKGDTATGATKSATVETGYTLNVPLFVNEGDVLVINTSDGSYISRA . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 191274 191831 . + 0 GCA_005502385.1_00719 GCA_005502385.1_00719_gene,GCA_005502385.1_00719_mRNA GCA_005502385.1_00719 Elongation factor P GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MISVNDFKTGLTISVDNGIWKVIDFQHVKPGKGSAFVRSKLRNLRTGAIQEKTFRAGEKVEQAMIENRRMQYLYADGDTHVFMDNETFDQTELSGDYLKDELKYLKANMEVQIQSYEGETIGIELPKTVELEVTETEPGIKGDTATGATKSATVETGYTLNVPLFVNEGDVLVINTSDGSYISRA persistent 185 efp elongation factor P GO:0003746,GO:0005737,GO:0006414,GO:0043043 COG0231,J WP_002449752.1 UPI00019FA940 UniRef100_A0A1L8Y7I2,UniRef50_Q2FY41,UniRef90_Q2FY41 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 192090 192566 . + . GCA_005502385.1_00720_gene GCA_005502385.1_00720 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNFKEIKELIQILDESSLTEINIEDNKGSVVNLKKQKETEIITPQYSQQPTVMASQPSVQTPMANEMSQTSEVNQENEMSNYETINAPMVGTFYKSPSPEEEAYVQVGDKVTNDSTVCILEAMKLFNEIQAEVTGEIVEILVEDGQMVEYGQPLFKVK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 192090 192566 . + . GCA_005502385.1_00720_mRNA GCA_005502385.1_00720 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNFKEIKELIQILDESSLTEINIEDNKGSVVNLKKQKETEIITPQYSQQPTVMASQPSVQTPMANEMSQTSEVNQENEMSNYETINAPMVGTFYKSPSPEEEAYVQVGDKVTNDSTVCILEAMKLFNEIQAEVTGEIVEILVEDGQMVEYGQPLFKVK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 192090 192566 . + 0 GCA_005502385.1_00720 GCA_005502385.1_00720_gene,GCA_005502385.1_00720_mRNA GCA_005502385.1_00720 Biotin carboxyl carrier protein of acetyl-CoA carboxylase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNFKEIKELIQILDESSLTEINIEDNKGSVVNLKKQKETEIITPQYSQQPTVMASQPSVQTPMANEMSQTSEVNQENEMSNYETINAPMVGTFYKSPSPEEEAYVQVGDKVTNDSTVCILEAMKLFNEIQAEVTGEIVEILVEDGQMVEYGQPLFKVK persistent 158 accB acetyl-CoA carboxylase biotin carboxyl carrier protein 6.4.1.2 GO:0003989,GO:0006633,GO:0009317 WP_019835214.1 UPI000369798B UniRef100_UPI000369798B,UniRef50_A0A090LU16,UniRef90_A0A8X8GLL2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 192566 193921 . + . GCA_005502385.1_00721_gene GCA_005502385.1_00721 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKVLIANRGEIAVRIIRACHDLGIQTVAIYSEGDKDALHTQIADEAYCVGPTQSKDSYLNIPNILSIATSTGCDAIHPGYGFLAENGDFAELCEACQLKFIGPSYQSIQKMGIKDVAKAEMIAANVPVVPGSDGLIDSIEDAKKVAKQIGYPVIIKATAGGGGKGIRVARNENDLENGYRMTQQEAQTAFGNGGLYLEKFIENFRHIEIQVIGDQFGNVIHLGERDCTIQRRMQKLVEESPSPILTDEKRKEMGKAAIRAAKAVNYENAGTIEFIYDLNENKFYFMEMNTRIQVEHPVTEMVTGVDLVKLQLKVAMGEPLPYKQDDITINGHAIEYRINAENPYKNFMPSPGKITQYLAPGGYGVRIESACYTNYTIPPYYDSMVAKLIVHEPTRDEAIMTGIRALSEYLILGIDTTIPFHLKLMNNDIFKSGDYNTNFLEKYNIMAESE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 192566 193921 . + . GCA_005502385.1_00721_mRNA GCA_005502385.1_00721 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKVLIANRGEIAVRIIRACHDLGIQTVAIYSEGDKDALHTQIADEAYCVGPTQSKDSYLNIPNILSIATSTGCDAIHPGYGFLAENGDFAELCEACQLKFIGPSYQSIQKMGIKDVAKAEMIAANVPVVPGSDGLIDSIEDAKKVAKQIGYPVIIKATAGGGGKGIRVARNENDLENGYRMTQQEAQTAFGNGGLYLEKFIENFRHIEIQVIGDQFGNVIHLGERDCTIQRRMQKLVEESPSPILTDEKRKEMGKAAIRAAKAVNYENAGTIEFIYDLNENKFYFMEMNTRIQVEHPVTEMVTGVDLVKLQLKVAMGEPLPYKQDDITINGHAIEYRINAENPYKNFMPSPGKITQYLAPGGYGVRIESACYTNYTIPPYYDSMVAKLIVHEPTRDEAIMTGIRALSEYLILGIDTTIPFHLKLMNNDIFKSGDYNTNFLEKYNIMAESE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 192566 193921 . + 0 GCA_005502385.1_00721 GCA_005502385.1_00721_gene,GCA_005502385.1_00721_mRNA GCA_005502385.1_00721 2-oxoglutarate carboxylase small subunit GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKVLIANRGEIAVRIIRACHDLGIQTVAIYSEGDKDALHTQIADEAYCVGPTQSKDSYLNIPNILSIATSTGCDAIHPGYGFLAENGDFAELCEACQLKFIGPSYQSIQKMGIKDVAKAEMIAANVPVVPGSDGLIDSIEDAKKVAKQIGYPVIIKATAGGGGKGIRVARNENDLENGYRMTQQEAQTAFGNGGLYLEKFIENFRHIEIQVIGDQFGNVIHLGERDCTIQRRMQKLVEESPSPILTDEKRKEMGKAAIRAAKAVNYENAGTIEFIYDLNENKFYFMEMNTRIQVEHPVTEMVTGVDLVKLQLKVAMGEPLPYKQDDITINGHAIEYRINAENPYKNFMPSPGKITQYLAPGGYGVRIESACYTNYTIPPYYDSMVAKLIVHEPTRDEAIMTGIRALSEYLILGIDTTIPFHLKLMNNDIFKSGDYNTNFLEKYNIMAESE persistent 451 accC acetyl-CoA carboxylase biotin carboxylase subunit 6.3.4.14 GO:0004075,GO:0009317,GO:0016874 WP_017176250.1 UPI0002F1AC2B UniRef100_A0A4Q9WT66,UniRef50_A0A0D0QX65,UniRef90_A0A4Q9WT66 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 193934 194293 . + . GCA_005502385.1_00722_gene GCA_005502385.1_00722 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVNVADYSHANLGKVEIVPEVISVIASIAVSEVEGVTGHFYELRKSNIEKISRKNLNKNLKVNTKDDGIHIDVYCSIKHGIKIAKVASKIQTSIFNSIKTMTAIEPKEINIHIMHITAE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 193934 194293 . + . GCA_005502385.1_00722_mRNA GCA_005502385.1_00722 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVNVADYSHANLGKVEIVPEVISVIASIAVSEVEGVTGHFYELRKSNIEKISRKNLNKNLKVNTKDDGIHIDVYCSIKHGIKIAKVASKIQTSIFNSIKTMTAIEPKEINIHIMHITAE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 193934 194293 . + 0 GCA_005502385.1_00722 GCA_005502385.1_00722_gene,GCA_005502385.1_00722_mRNA GCA_005502385.1_00722 putative protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVNVADYSHANLGKVEIVPEVISVIASIAVSEVEGVTGHFYELRKSNIEKISRKNLNKNLKVNTKDDGIHIDVYCSIKHGIKIAKVASKIQTSIFNSIKTMTAIEPKEINIHIMHITAE persistent 119 Alkaline shock protein 23 WP_017176251.1 UPI00031458B6 UniRef100_A0A4Q9WRX7,UniRef50_A0A853V4U3,UniRef90_A0AAE5JMP2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 194326 194712 . + . GCA_005502385.1_00723_gene GCA_005502385.1_00723 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSRKESRKQAFQTLFQLEMKNIDLTINEAINFIKDDYPDLDFEFIHWLVTGVKDHEQVLDQTIEPKLKDWSIQRLLKTDRIILRMATFELLHSDTPPKVIINEAVELTKQFSDEGHYKFINGVLSNIK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 194326 194712 . + . GCA_005502385.1_00723_mRNA GCA_005502385.1_00723 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSRKESRKQAFQTLFQLEMKNIDLTINEAINFIKDDYPDLDFEFIHWLVTGVKDHEQVLDQTIEPKLKDWSIQRLLKTDRIILRMATFELLHSDTPPKVIINEAVELTKQFSDEGHYKFINGVLSNIK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 194326 194712 . + 0 GCA_005502385.1_00723 GCA_005502385.1_00723_gene,GCA_005502385.1_00723_mRNA GCA_005502385.1_00723 Transcription antitermination protein NusB GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSRKESRKQAFQTLFQLEMKNIDLTINEAINFIKDDYPDLDFEFIHWLVTGVKDHEQVLDQTIEPKLKDWSIQRLLKTDRIILRMATFELLHSDTPPKVIINEAVELTKQFSDEGHYKFINGVLSNIK persistent 128 nusB transcription antitermination factor NusB GO:0006353 UniRef50_Q2FY45,UniRef90_A0A657ZU03 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 194733 196070 . + . GCA_005502385.1_00724_gene GCA_005502385.1_00724 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSEYLSVSTLTKYIKYKFDQDPHLQSILLKGELSNFKKHSSGHLYFNVKDKNSVISAMMFKGNASKLTFDPKEGDEVLLEARVSVYERRGNYQIYVNKMEIDGIGNLYQKLEQLKEKLNKQGIFNQNHKKAIPRFPKKIAILTADTGAAIRDIHTTIDSRYPLVEKISISTLVQGINAKNDIIEKIKYADTLGVDTIILGRGGGSIEDLWNFNEEEVVRAIYECHTPIISAVGHETDFTLSDFVADMRAATPTQAAVIATPDQYELIQQIHQYRFSLTKSIKQLVEKQHKQLDYLSSYYKFKQPTLLYDQQIQRRDDLEKKLTQRLTLNIEKNRNNITVLRQHFNIRRLNDLIVQYQKMSRNNENRLINLTYNLINHNKANLKNKIEQLNQLSPTNTMLRGYSIVNKDNKVITSTHDLNEQDEITLSMKDGNIDAIVKKVRCEDE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 194733 196070 . + . GCA_005502385.1_00724_mRNA GCA_005502385.1_00724 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSEYLSVSTLTKYIKYKFDQDPHLQSILLKGELSNFKKHSSGHLYFNVKDKNSVISAMMFKGNASKLTFDPKEGDEVLLEARVSVYERRGNYQIYVNKMEIDGIGNLYQKLEQLKEKLNKQGIFNQNHKKAIPRFPKKIAILTADTGAAIRDIHTTIDSRYPLVEKISISTLVQGINAKNDIIEKIKYADTLGVDTIILGRGGGSIEDLWNFNEEEVVRAIYECHTPIISAVGHETDFTLSDFVADMRAATPTQAAVIATPDQYELIQQIHQYRFSLTKSIKQLVEKQHKQLDYLSSYYKFKQPTLLYDQQIQRRDDLEKKLTQRLTLNIEKNRNNITVLRQHFNIRRLNDLIVQYQKMSRNNENRLINLTYNLINHNKANLKNKIEQLNQLSPTNTMLRGYSIVNKDNKVITSTHDLNEQDEITLSMKDGNIDAIVKKVRCEDE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 194733 196070 . + 0 GCA_005502385.1_00724 GCA_005502385.1_00724_gene,GCA_005502385.1_00724_mRNA GCA_005502385.1_00724 Exodeoxyribonuclease 7 large subunit GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSEYLSVSTLTKYIKYKFDQDPHLQSILLKGELSNFKKHSSGHLYFNVKDKNSVISAMMFKGNASKLTFDPKEGDEVLLEARVSVYERRGNYQIYVNKMEIDGIGNLYQKLEQLKEKLNKQGIFNQNHKKAIPRFPKKIAILTADTGAAIRDIHTTIDSRYPLVEKISISTLVQGINAKNDIIEKIKYADTLGVDTIILGRGGGSIEDLWNFNEEEVVRAIYECHTPIISAVGHETDFTLSDFVADMRAATPTQAAVIATPDQYELIQQIHQYRFSLTKSIKQLVEKQHKQLDYLSSYYKFKQPTLLYDQQIQRRDDLEKKLTQRLTLNIEKNRNNITVLRQHFNIRRLNDLIVQYQKMSRNNENRLINLTYNLINHNKANLKNKIEQLNQLSPTNTMLRGYSIVNKDNKVITSTHDLNEQDEITLSMKDGNIDAIVKKVRCEDE persistent 445 xseA exodeoxyribonuclease VII large subunit 3.1.11.6 GO:0006308,GO:0008855,GO:0009318 WP_048787740.1 UPI00065FEEB9 UniRef100_UPI00065FEEB9,UniRef50_Q2FY46,UniRef90_A0A974KXN4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 196063 196293 . + . GCA_005502385.1_00725_gene GCA_005502385.1_00725 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKEQQSFEEMMKELESIVQKLDNETVSLEESLDLYQRGMKLSSACDKTLKDAENKVNQLIKEETKDEDDVEEINE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 196063 196293 . + . GCA_005502385.1_00725_mRNA GCA_005502385.1_00725 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKEQQSFEEMMKELESIVQKLDNETVSLEESLDLYQRGMKLSSACDKTLKDAENKVNQLIKEETKDEDDVEEINE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 196063 196293 . + 0 GCA_005502385.1_00725 GCA_005502385.1_00725_gene,GCA_005502385.1_00725_mRNA GCA_005502385.1_00725 Exodeoxyribonuclease 7 small subunit GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKEQQSFEEMMKELESIVQKLDNETVSLEESLDLYQRGMKLSSACDKTLKDAENKVNQLIKEETKDEDDVEEINE persistent 76 exodeoxyribonuclease VII small subunit WP_017176254.1 UPI0002F9B144 UniRef100_A0A4V2KXC8,UniRef50_Q2FY47,UniRef90_A0A657ZRW1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 196268 197152 . + . GCA_005502385.1_00726_gene GCA_005502385.1_00726 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMLKKSMNELIEIINNNLDGIIKSSPLNTKLEESMQYSLDAGGKRIRPVLVLLTLEVLNENYKKGLQTALALEMIHTYSLIHDDLPAMDNDDFRRGKLTNHKVYGEWKAILAGDALLTKAFELIANDKNLEAETKVKVISRLAHDSGNLGMVGGQTLDMDSENTPIELHTLEQIHKAKTGALLKFSILSAADIANVNDETLNTLDCFSEHLGLMFQIKDDLLDVYGDEKKLGKKVGSDVENHKSTYVSLLGKSGAEEKLKYHKDAAIDAVNQLKSQYDVEPLLEIVDLFYSRDH . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 196268 197152 . + . GCA_005502385.1_00726_mRNA GCA_005502385.1_00726 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMLKKSMNELIEIINNNLDGIIKSSPLNTKLEESMQYSLDAGGKRIRPVLVLLTLEVLNENYKKGLQTALALEMIHTYSLIHDDLPAMDNDDFRRGKLTNHKVYGEWKAILAGDALLTKAFELIANDKNLEAETKVKVISRLAHDSGNLGMVGGQTLDMDSENTPIELHTLEQIHKAKTGALLKFSILSAADIANVNDETLNTLDCFSEHLGLMFQIKDDLLDVYGDEKKLGKKVGSDVENHKSTYVSLLGKSGAEEKLKYHKDAAIDAVNQLKSQYDVEPLLEIVDLFYSRDH . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 196268 197152 . + 0 GCA_005502385.1_00726 GCA_005502385.1_00726_gene,GCA_005502385.1_00726_mRNA GCA_005502385.1_00726 Farnesyl diphosphate synthase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMLKKSMNELIEIINNNLDGIIKSSPLNTKLEESMQYSLDAGGKRIRPVLVLLTLEVLNENYKKGLQTALALEMIHTYSLIHDDLPAMDNDDFRRGKLTNHKVYGEWKAILAGDALLTKAFELIANDKNLEAETKVKVISRLAHDSGNLGMVGGQTLDMDSENTPIELHTLEQIHKAKTGALLKFSILSAADIANVNDETLNTLDCFSEHLGLMFQIKDDLLDVYGDEKKLGKKVGSDVENHKSTYVSLLGKSGAEEKLKYHKDAAIDAVNQLKSQYDVEPLLEIVDLFYSRDH persistent 294 Polyprenyl synthetase family protein UniRef50_A0A4U9TB05,UniRef90_A0A974KXJ6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 197414 197866 . + . GCA_005502385.1_00727_gene GCA_005502385.1_00727 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKKSVRHIKIREIISSEQIETQDELVKRLNEYDLNVTQATVSRDIKELQLIKVPASSGQYVYSLPNDRKYHPLEKLGRYLMDSFVNIEGTGNLLVLKTLPGNAQSIGAILDQIDWDEVLGTICGDDTCLLICRDEEASHTIKTRIFNLL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 197414 197866 . + . GCA_005502385.1_00727_mRNA GCA_005502385.1_00727 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKKSVRHIKIREIISSEQIETQDELVKRLNEYDLNVTQATVSRDIKELQLIKVPASSGQYVYSLPNDRKYHPLEKLGRYLMDSFVNIEGTGNLLVLKTLPGNAQSIGAILDQIDWDEVLGTICGDDTCLLICRDEEASHTIKTRIFNLL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 197414 197866 . + 0 GCA_005502385.1_00727 GCA_005502385.1_00727_gene,GCA_005502385.1_00727_mRNA GCA_005502385.1_00727 Arginine repressor GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKKSVRHIKIREIISSEQIETQDELVKRLNEYDLNVTQATVSRDIKELQLIKVPASSGQYVYSLPNDRKYHPLEKLGRYLMDSFVNIEGTGNLLVLKTLPGNAQSIGAILDQIDWDEVLGTICGDDTCLLICRDEEASHTIKTRIFNLL persistent 150 ahrC transcriptional regulator AhrC/ArgR GO:0003677,GO:0003700,GO:0005737,GO:0006355,GO:0006526,GO:0034618,GO:0051259,GO:1900079 COG1438,K WP_002449839.1 UPI00019FA938 UniRef100_A0A1K1UW79,UniRef50_P17893,UniRef90_Q5HP32 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 197882 199555 . + . GCA_005502385.1_00728_gene GCA_005502385.1_00728 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLQTLSIKQFAIIDELEIHFSDGLTVLSGETGSGKSIIIDAIGQLIGMRASSDFVRHGEKKAIIEGIFDIDNSKEAISVLNELDIDIDEDFLLVKREIFSSGKSICRINNQIVTLQDLRKVMQELLDIHGQHETQTLLKQKYHLKLLDDYAENQYSRVKEQYETTFNEYKEKKKELEELQSADQALLQRLDLMKFQFEELQEASLKEGEITQLESDIKRIQNSEKLSLALNNAHVTLTDEHAITDRLYELSNHLQTIDDIIPGRFKKLKEDIDQFYYTLEDAKHELYDEMSNTEFDEQLLNELESRMNLLNNLKRKYGKTIDELITYQSKLESEIAKIENYEESTSQLKEEIDLLYEKVIKYGQSLSKERRIVARTLRDHIVAEIQNLQMKDANLEISFQPLETPTIEGIEFVEFLISPNKGEPLKSLNKIASGGELSRIMLALKSIFVESRGQTAILFDEVDSGVSGQAAQKMAEKMRDIAKYIQVICISHLPQVASMSDHHLLISKMSKNDRTTTQVKELKKEDKIDEIARMISGASVTELTRENAREMIAQNHK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 197882 199555 . + . GCA_005502385.1_00728_mRNA GCA_005502385.1_00728 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLQTLSIKQFAIIDELEIHFSDGLTVLSGETGSGKSIIIDAIGQLIGMRASSDFVRHGEKKAIIEGIFDIDNSKEAISVLNELDIDIDEDFLLVKREIFSSGKSICRINNQIVTLQDLRKVMQELLDIHGQHETQTLLKQKYHLKLLDDYAENQYSRVKEQYETTFNEYKEKKKELEELQSADQALLQRLDLMKFQFEELQEASLKEGEITQLESDIKRIQNSEKLSLALNNAHVTLTDEHAITDRLYELSNHLQTIDDIIPGRFKKLKEDIDQFYYTLEDAKHELYDEMSNTEFDEQLLNELESRMNLLNNLKRKYGKTIDELITYQSKLESEIAKIENYEESTSQLKEEIDLLYEKVIKYGQSLSKERRIVARTLRDHIVAEIQNLQMKDANLEISFQPLETPTIEGIEFVEFLISPNKGEPLKSLNKIASGGELSRIMLALKSIFVESRGQTAILFDEVDSGVSGQAAQKMAEKMRDIAKYIQVICISHLPQVASMSDHHLLISKMSKNDRTTTQVKELKKEDKIDEIARMISGASVTELTRENAREMIAQNHK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 197882 199555 . + 0 GCA_005502385.1_00728 GCA_005502385.1_00728_gene,GCA_005502385.1_00728_mRNA GCA_005502385.1_00728 DNA repair protein RecN GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLQTLSIKQFAIIDELEIHFSDGLTVLSGETGSGKSIIIDAIGQLIGMRASSDFVRHGEKKAIIEGIFDIDNSKEAISVLNELDIDIDEDFLLVKREIFSSGKSICRINNQIVTLQDLRKVMQELLDIHGQHETQTLLKQKYHLKLLDDYAENQYSRVKEQYETTFNEYKEKKKELEELQSADQALLQRLDLMKFQFEELQEASLKEGEITQLESDIKRIQNSEKLSLALNNAHVTLTDEHAITDRLYELSNHLQTIDDIIPGRFKKLKEDIDQFYYTLEDAKHELYDEMSNTEFDEQLLNELESRMNLLNNLKRKYGKTIDELITYQSKLESEIAKIENYEESTSQLKEEIDLLYEKVIKYGQSLSKERRIVARTLRDHIVAEIQNLQMKDANLEISFQPLETPTIEGIEFVEFLISPNKGEPLKSLNKIASGGELSRIMLALKSIFVESRGQTAILFDEVDSGVSGQAAQKMAEKMRDIAKYIQVICISHLPQVASMSDHHLLISKMSKNDRTTTQVKELKKEDKIDEIARMISGASVTELTRENAREMIAQNHK persistent 557 recN DNA repair protein RecN GO:0005524,GO:0006281,GO:0006310 WP_017176256.1 UPI0003184576 UniRef100_A0A3S7GSF0,UniRef50_B9E6Q3,UniRef90_A0A3S7GSF0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 199699 201123 . + . GCA_005502385.1_00729_gene GCA_005502385.1_00729 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSEKQYDLVVLGGGTAGYVAAIRASQLGKKVAIVEKSLLGGTCLHKGCIPTKALLKSAEVTRTVRQSSEFGIDTNDLHINFEKMMNRKTDIVNQMHNGVQSLMQKNHIDIYNGIGRIMGTSIFSPQSGTISVEYEDGSSELLPNQFVLIATGSRPQTLPFLEINHQNILSSDDILQIDTLPDIIAIVGGGVIGLEFASLLTDLNVNVKVIEAGKRILPSDSKSISTFLRDSLIERGVEFFEDCQLSEENIIHKNDVIQININEKTTITVDKILVAVGRVPNTSDIGIQNTKIQLDTHGYIKVNEFQQTSDKHLYAAGDCIGTLQLAHVASKEGITAVEHMFNDHPLPVNYHLMPKCVYTYPEVASIGLNIETAKSQNIKATSYKIPFNAIGKAVIEETKNKRGFCEIILNKDNGDIIGLSMVGPHVTELINEVALLQFMNGSTLELGLTTHAHPSLSEILMELGLKAENRAIHV . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 199699 201123 . + . GCA_005502385.1_00729_mRNA GCA_005502385.1_00729 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSEKQYDLVVLGGGTAGYVAAIRASQLGKKVAIVEKSLLGGTCLHKGCIPTKALLKSAEVTRTVRQSSEFGIDTNDLHINFEKMMNRKTDIVNQMHNGVQSLMQKNHIDIYNGIGRIMGTSIFSPQSGTISVEYEDGSSELLPNQFVLIATGSRPQTLPFLEINHQNILSSDDILQIDTLPDIIAIVGGGVIGLEFASLLTDLNVNVKVIEAGKRILPSDSKSISTFLRDSLIERGVEFFEDCQLSEENIIHKNDVIQININEKTTITVDKILVAVGRVPNTSDIGIQNTKIQLDTHGYIKVNEFQQTSDKHLYAAGDCIGTLQLAHVASKEGITAVEHMFNDHPLPVNYHLMPKCVYTYPEVASIGLNIETAKSQNIKATSYKIPFNAIGKAVIEETKNKRGFCEIILNKDNGDIIGLSMVGPHVTELINEVALLQFMNGSTLELGLTTHAHPSLSEILMELGLKAENRAIHV . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 199699 201123 . + 0 GCA_005502385.1_00729 GCA_005502385.1_00729_gene,GCA_005502385.1_00729_mRNA GCA_005502385.1_00729 Dihydrolipoyl dehydrogenase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSEKQYDLVVLGGGTAGYVAAIRASQLGKKVAIVEKSLLGGTCLHKGCIPTKALLKSAEVTRTVRQSSEFGIDTNDLHINFEKMMNRKTDIVNQMHNGVQSLMQKNHIDIYNGIGRIMGTSIFSPQSGTISVEYEDGSSELLPNQFVLIATGSRPQTLPFLEINHQNILSSDDILQIDTLPDIIAIVGGGVIGLEFASLLTDLNVNVKVIEAGKRILPSDSKSISTFLRDSLIERGVEFFEDCQLSEENIIHKNDVIQININEKTTITVDKILVAVGRVPNTSDIGIQNTKIQLDTHGYIKVNEFQQTSDKHLYAAGDCIGTLQLAHVASKEGITAVEHMFNDHPLPVNYHLMPKCVYTYPEVASIGLNIETAKSQNIKATSYKIPFNAIGKAVIEETKNKRGFCEIILNKDNGDIIGLSMVGPHVTELINEVALLQFMNGSTLELGLTTHAHPSLSEILMELGLKAENRAIHV persistent 474 lpdA dihydrolipoyl dehydrogenase 1.8.1.4 GO:0004148,GO:0050660 UniRef50_A0A0U1MLM9,UniRef90_A0A3S7GV80 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 201138 202139 . + . GCA_005502385.1_00730_gene GCA_005502385.1_00730 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIDYKSVGLTDEDLREIYKWMDLGRKLDERLWLLNRAGKIPFVVSGQGQEATQIGMAYAMKEGDISSPYYRDLAFVTYMGISPYDTMLASFGKKDDINSGGKQMPSHFSHRGKGILSQSSPVATQIPHSVGAALALKMNQQSNIATATVGEGSSNQGDFHEGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAATHLSDRAIGYGIHGETVDGNDPIAMYKAMKEARERALNGEGATLIEAITTRMTPHSSDDDDTYRSKEERDAFKTSDCNLKFKNELLDLGIIDEDWLNELDNAHKSIIDKATKDAENAQYPDVEETYQYVYDPEGDIFND . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 201138 202139 . + . GCA_005502385.1_00730_mRNA GCA_005502385.1_00730 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIDYKSVGLTDEDLREIYKWMDLGRKLDERLWLLNRAGKIPFVVSGQGQEATQIGMAYAMKEGDISSPYYRDLAFVTYMGISPYDTMLASFGKKDDINSGGKQMPSHFSHRGKGILSQSSPVATQIPHSVGAALALKMNQQSNIATATVGEGSSNQGDFHEGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAATHLSDRAIGYGIHGETVDGNDPIAMYKAMKEARERALNGEGATLIEAITTRMTPHSSDDDDTYRSKEERDAFKTSDCNLKFKNELLDLGIIDEDWLNELDNAHKSIIDKATKDAENAQYPDVEETYQYVYDPEGDIFND . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 201138 202139 . + 0 GCA_005502385.1_00730 GCA_005502385.1_00730_gene,GCA_005502385.1_00730_mRNA GCA_005502385.1_00730 2-oxoisovalerate dehydrogenase subunit alpha GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIDYKSVGLTDEDLREIYKWMDLGRKLDERLWLLNRAGKIPFVVSGQGQEATQIGMAYAMKEGDISSPYYRDLAFVTYMGISPYDTMLASFGKKDDINSGGKQMPSHFSHRGKGILSQSSPVATQIPHSVGAALALKMNQQSNIATATVGEGSSNQGDFHEGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAATHLSDRAIGYGIHGETVDGNDPIAMYKAMKEARERALNGEGATLIEAITTRMTPHSSDDDDTYRSKEERDAFKTSDCNLKFKNELLDLGIIDEDWLNELDNAHKSIIDKATKDAENAQYPDVEETYQYVYDPEGDIFND persistent 333 2-oxoisovalerate dehydrogenase subunit alpha WP_061544214.1 UPI000778C947 UniRef100_UPI000778C947,UniRef50_A0A085UCJ1,UniRef90_A0A4Q9WT27 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 202132 203115 . + . GCA_005502385.1_00731_gene GCA_005502385.1_00731 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTKMSYIEAIQNAQDLAMEKDNNIFILGEDVGRKGGVFGATRGLQEKYGELRVIDTPLAESNIIGTAIGAAMLGKRPIAEIQFADFILPAVNQIISEAAKMRYRSNNDWQCPLTVRAPFGGGVHGGLYHSQSIESIFASTPGLTIVIPSTPYDAKGLLLSSIESNDPVLFFEHKKAYRFLKDEVPDSYYTIPLGKADVKREGDDITVFTYGLCVNYCIQAADILEADGINVEVVDLRTVYPLDKTTIIERAKRNGKILLVTEDNLEGSVMSEVSAIIAEHCLFELDAPIMRLAGPDVPSMPFSPNLENEVMMNPDKILKKMRELAQF . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 202132 203115 . + . GCA_005502385.1_00731_mRNA GCA_005502385.1_00731 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTKMSYIEAIQNAQDLAMEKDNNIFILGEDVGRKGGVFGATRGLQEKYGELRVIDTPLAESNIIGTAIGAAMLGKRPIAEIQFADFILPAVNQIISEAAKMRYRSNNDWQCPLTVRAPFGGGVHGGLYHSQSIESIFASTPGLTIVIPSTPYDAKGLLLSSIESNDPVLFFEHKKAYRFLKDEVPDSYYTIPLGKADVKREGDDITVFTYGLCVNYCIQAADILEADGINVEVVDLRTVYPLDKTTIIERAKRNGKILLVTEDNLEGSVMSEVSAIIAEHCLFELDAPIMRLAGPDVPSMPFSPNLENEVMMNPDKILKKMRELAQF . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 202132 203115 . + 0 GCA_005502385.1_00731 GCA_005502385.1_00731_gene,GCA_005502385.1_00731_mRNA GCA_005502385.1_00731 2-oxoisovalerate dehydrogenase subunit beta GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTKMSYIEAIQNAQDLAMEKDNNIFILGEDVGRKGGVFGATRGLQEKYGELRVIDTPLAESNIIGTAIGAAMLGKRPIAEIQFADFILPAVNQIISEAAKMRYRSNNDWQCPLTVRAPFGGGVHGGLYHSQSIESIFASTPGLTIVIPSTPYDAKGLLLSSIESNDPVLFFEHKKAYRFLKDEVPDSYYTIPLGKADVKREGDDITVFTYGLCVNYCIQAADILEADGINVEVVDLRTVYPLDKTTIIERAKRNGKILLVTEDNLEGSVMSEVSAIIAEHCLFELDAPIMRLAGPDVPSMPFSPNLENEVMMNPDKILKKMRELAQF persistent 327 acoB Pyruvate dehydrogenase E1 component subunit beta C,COG0022 WP_049434813.1 UPI00066EC257 UniRef100_UPI00066EC257,UniRef50_P37941,UniRef90_A0A380G031 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 203128 204414 . + . GCA_005502385.1_00732_gene GCA_005502385.1_00732 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDVKMPKLGESVHEGTIEQWLVSEGDHVDEYEPLCEVVTDKVTAEVPSTISGTITELIATEGETIEINQTICKIQPDDTSLNSNQDDTNETNETPSQTQSNSVKSQSKPSNTNQSSKHSINNGRFSPVVFKIASENDIDLSQVPGTGFEGRVTKKDIETYIQENNQQNSKETYTTQITNHSETTSRNNNASSNEPLDDYTISVKGVRKAIAQNMVTSATEIPHGWMMIEVDATNLVKTRNHYKTVFKKQEGYNLTFFAFFVKAVAEALKSNPLLNSSWDGNEIIIHKDINISIAVADEDKLYVPVIKNADEKSIKGIAREINQLAQKARNQQLAQEDMTGGTFTVNNTGTFGSVSSMGIINHPQAAILQVESIVKKPVVIDDMIAIRNMVNLCISIDHRILDGVQTGRFMSQVKNRIESYSIETTNIY . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 203128 204414 . + . GCA_005502385.1_00732_mRNA GCA_005502385.1_00732 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDVKMPKLGESVHEGTIEQWLVSEGDHVDEYEPLCEVVTDKVTAEVPSTISGTITELIATEGETIEINQTICKIQPDDTSLNSNQDDTNETNETPSQTQSNSVKSQSKPSNTNQSSKHSINNGRFSPVVFKIASENDIDLSQVPGTGFEGRVTKKDIETYIQENNQQNSKETYTTQITNHSETTSRNNNASSNEPLDDYTISVKGVRKAIAQNMVTSATEIPHGWMMIEVDATNLVKTRNHYKTVFKKQEGYNLTFFAFFVKAVAEALKSNPLLNSSWDGNEIIIHKDINISIAVADEDKLYVPVIKNADEKSIKGIAREINQLAQKARNQQLAQEDMTGGTFTVNNTGTFGSVSSMGIINHPQAAILQVESIVKKPVVIDDMIAIRNMVNLCISIDHRILDGVQTGRFMSQVKNRIESYSIETTNIY . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 203128 204414 . + 0 GCA_005502385.1_00732 GCA_005502385.1_00732_gene,GCA_005502385.1_00732_mRNA GCA_005502385.1_00732 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDVKMPKLGESVHEGTIEQWLVSEGDHVDEYEPLCEVVTDKVTAEVPSTISGTITELIATEGETIEINQTICKIQPDDTSLNSNQDDTNETNETPSQTQSNSVKSQSKPSNTNQSSKHSINNGRFSPVVFKIASENDIDLSQVPGTGFEGRVTKKDIETYIQENNQQNSKETYTTQITNHSETTSRNNNASSNEPLDDYTISVKGVRKAIAQNMVTSATEIPHGWMMIEVDATNLVKTRNHYKTVFKKQEGYNLTFFAFFVKAVAEALKSNPLLNSSWDGNEIIIHKDINISIAVADEDKLYVPVIKNADEKSIKGIAREINQLAQKARNQQLAQEDMTGGTFTVNNTGTFGSVSSMGIINHPQAAILQVESIVKKPVVIDDMIAIRNMVNLCISIDHRILDGVQTGRFMSQVKNRIESYSIETTNIY persistent 428 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex WP_017176259.1 UPI0002EEDF4C UniRef100_A0A4Q9WRY6,UniRef50_P37942,UniRef90_A0A974KYW4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 204507 204944 . + . GCA_005502385.1_00733_gene GCA_005502385.1_00733 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDLNFDLYMNGVVEQARNEIESAGYEQLTTSDEVDKVFKQDGTTLVMINSVCGCAGGIARPAASHALHYDKLPNRLVTVFAGQDKEATQQARDYFEGYAPSSPSFALMKDGKITEMIERHQIEGHDVMDVINQLQKLFDKYCEER . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 204507 204944 . + . GCA_005502385.1_00733_mRNA GCA_005502385.1_00733 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDLNFDLYMNGVVEQARNEIESAGYEQLTTSDEVDKVFKQDGTTLVMINSVCGCAGGIARPAASHALHYDKLPNRLVTVFAGQDKEATQQARDYFEGYAPSSPSFALMKDGKITEMIERHQIEGHDVMDVINQLQKLFDKYCEER . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 204507 204944 . + 0 GCA_005502385.1_00733 GCA_005502385.1_00733_gene,GCA_005502385.1_00733_mRNA GCA_005502385.1_00733 hypothetical protein UPF0403 protein SA1345 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDLNFDLYMNGVVEQARNEIESAGYEQLTTSDEVDKVFKQDGTTLVMINSVCGCAGGIARPAASHALHYDKLPNRLVTVFAGQDKEATQQARDYFEGYAPSSPSFALMKDGKITEMIERHQIEGHDVMDVINQLQKLFDKYCEER persistent 145 Bacilliredoxin SAR1592 GO:0045454 WP_017176260.1 UPI0002F9785F UniRef100_A0A1K1UVQ2,UniRef50_Q2FY55,UniRef90_Q2FY55 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 204957 205934 . + . GCA_005502385.1_00734_gene GCA_005502385.1_00734 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLTLNPYRIGFRTLKTAVGITLGVILAKWIGLDNYASSAILIVLCIKHTKVHSLQAIGSRFVSCLLMLFFGSFIFNLLGQNAIVLGLIVLLFIPLTVMLNVQEGVVTSCVILLHVFNAKVIGLHLIINEILLLIIGLGIAFLMNLIMPSLDNTLGNFKKEIENEIKTIFTQYSEACLNINKQLSISFDTLENNIRKAKSIAFRDVKNHFVRNENSYYHYFDMREEQLEILRRIQTLIHNTSANDPLLETVAHLMAEIGDNVNSNDYTVLRLHSLYEIRLKLDELPLPESHQSLKSRASMMQILNELEEYLNIKSQFGSLKLHSEI . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 204957 205934 . + . GCA_005502385.1_00734_mRNA GCA_005502385.1_00734 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLTLNPYRIGFRTLKTAVGITLGVILAKWIGLDNYASSAILIVLCIKHTKVHSLQAIGSRFVSCLLMLFFGSFIFNLLGQNAIVLGLIVLLFIPLTVMLNVQEGVVTSCVILLHVFNAKVIGLHLIINEILLLIIGLGIAFLMNLIMPSLDNTLGNFKKEIENEIKTIFTQYSEACLNINKQLSISFDTLENNIRKAKSIAFRDVKNHFVRNENSYYHYFDMREEQLEILRRIQTLIHNTSANDPLLETVAHLMAEIGDNVNSNDYTVLRLHSLYEIRLKLDELPLPESHQSLKSRASMMQILNELEEYLNIKSQFGSLKLHSEI . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 204957 205934 . + 0 GCA_005502385.1_00734 GCA_005502385.1_00734_gene,GCA_005502385.1_00734_mRNA GCA_005502385.1_00734 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLTLNPYRIGFRTLKTAVGITLGVILAKWIGLDNYASSAILIVLCIKHTKVHSLQAIGSRFVSCLLMLFFGSFIFNLLGQNAIVLGLIVLLFIPLTVMLNVQEGVVTSCVILLHVFNAKVIGLHLIINEILLLIIGLGIAFLMNLIMPSLDNTLGNFKKEIENEIKTIFTQYSEACLNINKQLSISFDTLENNIRKAKSIAFRDVKNHFVRNENSYYHYFDMREEQLEILRRIQTLIHNTSANDPLLETVAHLMAEIGDNVNSNDYTVLRLHSLYEIRLKLDELPLPESHQSLKSRASMMQILNELEEYLNIKSQFGSLKLHSEI persistent 325 Putative aromatic acid exporter C-terminal domain-containing protein WP_017176261.1 UPI000312CF57 UniRef100_A0A4Q9WST1,UniRef50_Q49XV8,UniRef90_A0AAE5JMN6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 206350 207474 . + . GCA_005502385.1_00735_gene GCA_005502385.1_00735 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MINSRRLLNTFLELVQINSETGNEETIQPILKKKFIDLGLKVVEDNASKREWLGANNLICTLPSSKGKEHVSKIYFTSHMDTVVPGINVKPILKEDGYVYSNGTTVLGADDKAGIAALLEMIQTINEQQLPHGKIQFIITVGEEAGLKGAKELDQNLIDAEFGYAVDASQAVGTTVVGAPTQMIINTTIYGKTAHASKPNQGISAIHIAAKAINKMHLGQIDQDTTANIGKFYGGSATNIVADKVILEGEARSHNDKSLEYQVNHMKETFETTAKELGGKANVEISKSYPGFRRNDSETVTQYAIKSAKILGLSGKTVIAGGGSDGSIINTYHIPTVILGVGYEHIHTTSERIPVAALNQLTNQLIKIVELVAK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 206350 207474 . + . GCA_005502385.1_00735_mRNA GCA_005502385.1_00735 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MINSRRLLNTFLELVQINSETGNEETIQPILKKKFIDLGLKVVEDNASKREWLGANNLICTLPSSKGKEHVSKIYFTSHMDTVVPGINVKPILKEDGYVYSNGTTVLGADDKAGIAALLEMIQTINEQQLPHGKIQFIITVGEEAGLKGAKELDQNLIDAEFGYAVDASQAVGTTVVGAPTQMIINTTIYGKTAHASKPNQGISAIHIAAKAINKMHLGQIDQDTTANIGKFYGGSATNIVADKVILEGEARSHNDKSLEYQVNHMKETFETTAKELGGKANVEISKSYPGFRRNDSETVTQYAIKSAKILGLSGKTVIAGGGSDGSIINTYHIPTVILGVGYEHIHTTSERIPVAALNQLTNQLIKIVELVAK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 206350 207474 . + 0 GCA_005502385.1_00735 GCA_005502385.1_00735_gene,GCA_005502385.1_00735_mRNA GCA_005502385.1_00735 Peptidase T GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MINSRRLLNTFLELVQINSETGNEETIQPILKKKFIDLGLKVVEDNASKREWLGANNLICTLPSSKGKEHVSKIYFTSHMDTVVPGINVKPILKEDGYVYSNGTTVLGADDKAGIAALLEMIQTINEQQLPHGKIQFIITVGEEAGLKGAKELDQNLIDAEFGYAVDASQAVGTTVVGAPTQMIINTTIYGKTAHASKPNQGISAIHIAAKAINKMHLGQIDQDTTANIGKFYGGSATNIVADKVILEGEARSHNDKSLEYQVNHMKETFETTAKELGGKANVEISKSYPGFRRNDSETVTQYAIKSAKILGLSGKTVIAGGGSDGSIINTYHIPTVILGVGYEHIHTTSERIPVAALNQLTNQLIKIVELVAK persistent 374 Peptidase M20 dimerisation domain-containing protein 3.4.11.4 UniRef50_A0A380G6E1,UniRef90_A0AAE5JPD8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 207552 208958 . + . GCA_005502385.1_00736_gene GCA_005502385.1_00736 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTQQIGVVGLAVMGKNLAWNIESRGYSVSVYNRSSDKTDLMIKESEGKQIHPTYSLEDFVNSLEKPRKILLMVKAGPATDATIDSLLPLLDDDDILIDGGNTNYQDTIRRNKALAESGINFIGMGVSGGEIGALTGPSLMPGGQQEAYNKVSDILDAIAAKAKDGAACVEYIGPNGAGHYVKMVHNGIEYADMQLIAESYAMMKELLGMSHEEISKTFKEWNAGELESYLIEITGDIFTKLDENNEPLVEKILDTAGQKGTGKWTSINALELGIPLTIITESVFARFISSIKEERVNASKVLSGPKSNFDGNREDFLEKIRKALYMSKICSYAQGFAQMRKASNENEWNLKLGDLAMIWREGCIIRAQFLQKIKDAYDNNSGLQNLLLDPYFKGIVTEYQDALREVVATGVKNGVPTPGFSASISYYDSYRSEDLPANLIQAQRDYFGAHTYERKDKDGIFHTQWTEE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 207552 208958 . + . GCA_005502385.1_00736_mRNA GCA_005502385.1_00736 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTQQIGVVGLAVMGKNLAWNIESRGYSVSVYNRSSDKTDLMIKESEGKQIHPTYSLEDFVNSLEKPRKILLMVKAGPATDATIDSLLPLLDDDDILIDGGNTNYQDTIRRNKALAESGINFIGMGVSGGEIGALTGPSLMPGGQQEAYNKVSDILDAIAAKAKDGAACVEYIGPNGAGHYVKMVHNGIEYADMQLIAESYAMMKELLGMSHEEISKTFKEWNAGELESYLIEITGDIFTKLDENNEPLVEKILDTAGQKGTGKWTSINALELGIPLTIITESVFARFISSIKEERVNASKVLSGPKSNFDGNREDFLEKIRKALYMSKICSYAQGFAQMRKASNENEWNLKLGDLAMIWREGCIIRAQFLQKIKDAYDNNSGLQNLLLDPYFKGIVTEYQDALREVVATGVKNGVPTPGFSASISYYDSYRSEDLPANLIQAQRDYFGAHTYERKDKDGIFHTQWTEE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 207552 208958 . + 0 GCA_005502385.1_00736 GCA_005502385.1_00736_gene,GCA_005502385.1_00736_mRNA GCA_005502385.1_00736 6-phosphogluconate dehydrogenase%2C decarboxylating GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTQQIGVVGLAVMGKNLAWNIESRGYSVSVYNRSSDKTDLMIKESEGKQIHPTYSLEDFVNSLEKPRKILLMVKAGPATDATIDSLLPLLDDDDILIDGGNTNYQDTIRRNKALAESGINFIGMGVSGGEIGALTGPSLMPGGQQEAYNKVSDILDAIAAKAKDGAACVEYIGPNGAGHYVKMVHNGIEYADMQLIAESYAMMKELLGMSHEEISKTFKEWNAGELESYLIEITGDIFTKLDENNEPLVEKILDTAGQKGTGKWTSINALELGIPLTIITESVFARFISSIKEERVNASKVLSGPKSNFDGNREDFLEKIRKALYMSKICSYAQGFAQMRKASNENEWNLKLGDLAMIWREGCIIRAQFLQKIKDAYDNNSGLQNLLLDPYFKGIVTEYQDALREVVATGVKNGVPTPGFSASISYYDSYRSEDLPANLIQAQRDYFGAHTYERKDKDGIFHTQWTEE persistent 468 gndA NADP-dependent phosphogluconate dehydrogenase 1.1.1.44 GO:0004616,GO:0006098,GO:0016054,GO:0019521,GO:0050661 COG0362,G WP_017176264.1 UPI0002F55026 UniRef100_A0A4Q9WRZ1,UniRef50_P00350,UniRef90_Q931R3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 209319 210965 . + . GCA_005502385.1_00737_gene GCA_005502385.1_00737 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEKNWWKEAVAYQVYPRSFNDSNNDGIGDLPGMVEKLDYLKDLGIDVIWLSPMYKSPNDDNGYDISDYQDIMEEFGTMEDFNHLLSETHKRGMKLILDLVVNHTSDEHPWFIESRSSKDNPKRDWYIWADPKSDGSEPNNWESIFNGSTWEYDDTTKQYYFHLFSKKQPDLNWSNPDVREAVFKMMNWWFEKGIDGFRVDAITHIKKTFEAGDLPVPKGKQYAPAFDVDMNQPGIQDWLQEMKDKSLSHYDIMTVGEANGVNPDNAKEWVGEKEGKFNMIFQFEHLGLWSTGDSKFDVLSYKNVLNRWQKQLEGIGWNALFIENHDQPRRVSTWGDDTKYWFESATSHAVVYFLQQGTPFIYQGQEIGMTNYPFESIETFNDVAVKTEYQIVKSQGGDVNQLLDKYKMENRDNSRTPMQWTNEVNGGFTEGTPWFPVNPNYKTINVAQQSEDSDSVLNFYKRLIKLKKSDDIYTYGEFNLIDDANENIFAYTRKLNNKTVLVAGNLTDHVASLNLPFEVEASQIKLHNYKNDLDITNMKPFEAFVAEL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 209319 210965 . + . GCA_005502385.1_00737_mRNA GCA_005502385.1_00737 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEKNWWKEAVAYQVYPRSFNDSNNDGIGDLPGMVEKLDYLKDLGIDVIWLSPMYKSPNDDNGYDISDYQDIMEEFGTMEDFNHLLSETHKRGMKLILDLVVNHTSDEHPWFIESRSSKDNPKRDWYIWADPKSDGSEPNNWESIFNGSTWEYDDTTKQYYFHLFSKKQPDLNWSNPDVREAVFKMMNWWFEKGIDGFRVDAITHIKKTFEAGDLPVPKGKQYAPAFDVDMNQPGIQDWLQEMKDKSLSHYDIMTVGEANGVNPDNAKEWVGEKEGKFNMIFQFEHLGLWSTGDSKFDVLSYKNVLNRWQKQLEGIGWNALFIENHDQPRRVSTWGDDTKYWFESATSHAVVYFLQQGTPFIYQGQEIGMTNYPFESIETFNDVAVKTEYQIVKSQGGDVNQLLDKYKMENRDNSRTPMQWTNEVNGGFTEGTPWFPVNPNYKTINVAQQSEDSDSVLNFYKRLIKLKKSDDIYTYGEFNLIDDANENIFAYTRKLNNKTVLVAGNLTDHVASLNLPFEVEASQIKLHNYKNDLDITNMKPFEAFVAEL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 209319 210965 . + 0 GCA_005502385.1_00737 GCA_005502385.1_00737_gene,GCA_005502385.1_00737_mRNA GCA_005502385.1_00737 Oligo-1%2C6-glucosidase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEKNWWKEAVAYQVYPRSFNDSNNDGIGDLPGMVEKLDYLKDLGIDVIWLSPMYKSPNDDNGYDISDYQDIMEEFGTMEDFNHLLSETHKRGMKLILDLVVNHTSDEHPWFIESRSSKDNPKRDWYIWADPKSDGSEPNNWESIFNGSTWEYDDTTKQYYFHLFSKKQPDLNWSNPDVREAVFKMMNWWFEKGIDGFRVDAITHIKKTFEAGDLPVPKGKQYAPAFDVDMNQPGIQDWLQEMKDKSLSHYDIMTVGEANGVNPDNAKEWVGEKEGKFNMIFQFEHLGLWSTGDSKFDVLSYKNVLNRWQKQLEGIGWNALFIENHDQPRRVSTWGDDTKYWFESATSHAVVYFLQQGTPFIYQGQEIGMTNYPFESIETFNDVAVKTEYQIVKSQGGDVNQLLDKYKMENRDNSRTPMQWTNEVNGGFTEGTPWFPVNPNYKTINVAQQSEDSDSVLNFYKRLIKLKKSDDIYTYGEFNLIDDANENIFAYTRKLNNKTVLVAGNLTDHVASLNLPFEVEASQIKLHNYKNDLDITNMKPFEAFVAEL persistent 548 Alpha-amylase WP_019835223.1 UPI00038085C6 UniRef100_UPI00038085C6,UniRef50_A0A090XUH5,UniRef90_A0A8X8GVR4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 211019 211885 . - . GCA_005502385.1_00738_gene GCA_005502385.1_00738 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDVIKQIQQAIVYIEDHLLEPFNLQDLSDYVGLSPYHLDQSFKMIVGQPPESYAHSRKMTEAAKEMIQSSSRLVDVAKRYNYLSSNDFANDFSDFHGISPIQASTKKEELKMNERLYIKLTTTERAPYPYRLEATKDTPLVGYVKYIEANQLSNPYKVPDFLEDLYLDGKIKELKRYNNISPYELFVITCPLDEGVELFVGVPSERYPAHLESRLLPGRHYAKFNLQGQVDYTVNEAWYYIESSLQLTLPYEKNSLYVEIYPFDLSFEDPFTKIQLWLPIKQETYDIE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 211019 211885 . - . GCA_005502385.1_00738_mRNA GCA_005502385.1_00738 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDVIKQIQQAIVYIEDHLLEPFNLQDLSDYVGLSPYHLDQSFKMIVGQPPESYAHSRKMTEAAKEMIQSSSRLVDVAKRYNYLSSNDFANDFSDFHGISPIQASTKKEELKMNERLYIKLTTTERAPYPYRLEATKDTPLVGYVKYIEANQLSNPYKVPDFLEDLYLDGKIKELKRYNNISPYELFVITCPLDEGVELFVGVPSERYPAHLESRLLPGRHYAKFNLQGQVDYTVNEAWYYIESSLQLTLPYEKNSLYVEIYPFDLSFEDPFTKIQLWLPIKQETYDIE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 211019 211885 . - 0 GCA_005502385.1_00738 GCA_005502385.1_00738_gene,GCA_005502385.1_00738_mRNA GCA_005502385.1_00738 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDVIKQIQQAIVYIEDHLLEPFNLQDLSDYVGLSPYHLDQSFKMIVGQPPESYAHSRKMTEAAKEMIQSSSRLVDVAKRYNYLSSNDFANDFSDFHGISPIQASTKKEELKMNERLYIKLTTTERAPYPYRLEATKDTPLVGYVKYIEANQLSNPYKVPDFLEDLYLDGKIKELKRYNNISPYELFVITCPLDEGVELFVGVPSERYPAHLESRLLPGRHYAKFNLQGQVDYTVNEAWYYIESSLQLTLPYEKNSLYVEIYPFDLSFEDPFTKIQLWLPIKQETYDIE persistent 288 araC AraC family transcriptional regulator UniRef50_Q2FY65,UniRef90_A0A3S7GSH9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 212097 213581 . - . GCA_005502385.1_00739_gene GCA_005502385.1_00739 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNTHTKHIPCLITIFGATGDLSHRKLFPSLFHLYQQDNLDEHIAIIGVGRRDYTNDFFREQVKQSIQTHVKDTDRLDEFIEHVFYFKNDVNEEESYHELLAFSNELDDTFKLEGNRLFYLAMAPQFFGPISDYLKASGLTETKGFKRLVIEKPFGSDFKSAEKLNNQLRQSFKEEEIYRIDHYLGKDMVQNIEVLRFANAMFEPLWNNKYISNIQITSSEILGVEDRGGYYESSGALKDMVQNHMLQMVALLAMEAPISLKSEDIRAEKVKVLKSLRQLKPEEVNQNFVRGQYGEGTINDQRVIAYRDEDRVASDSNTPTFVSGRLTIDNFRWAGVPFYIRTGKRMKSKCIQVVVEFKEVPMNLYYQTDRLLDSNLLVINIQPNEGISLHLNAKKSIQGIETKPVQLSYAMSAQDKMNTVDAYENLLFDCLKGDATNFTHWEELKSTWKFVDAIQEHWTMIDPNFPNYKSGTNGPIESDLLLSRDGNHWWDDIQ . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 212097 213581 . - . GCA_005502385.1_00739_mRNA GCA_005502385.1_00739 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNTHTKHIPCLITIFGATGDLSHRKLFPSLFHLYQQDNLDEHIAIIGVGRRDYTNDFFREQVKQSIQTHVKDTDRLDEFIEHVFYFKNDVNEEESYHELLAFSNELDDTFKLEGNRLFYLAMAPQFFGPISDYLKASGLTETKGFKRLVIEKPFGSDFKSAEKLNNQLRQSFKEEEIYRIDHYLGKDMVQNIEVLRFANAMFEPLWNNKYISNIQITSSEILGVEDRGGYYESSGALKDMVQNHMLQMVALLAMEAPISLKSEDIRAEKVKVLKSLRQLKPEEVNQNFVRGQYGEGTINDQRVIAYRDEDRVASDSNTPTFVSGRLTIDNFRWAGVPFYIRTGKRMKSKCIQVVVEFKEVPMNLYYQTDRLLDSNLLVINIQPNEGISLHLNAKKSIQGIETKPVQLSYAMSAQDKMNTVDAYENLLFDCLKGDATNFTHWEELKSTWKFVDAIQEHWTMIDPNFPNYKSGTNGPIESDLLLSRDGNHWWDDIQ . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 212097 213581 . - 0 GCA_005502385.1_00739 GCA_005502385.1_00739_gene,GCA_005502385.1_00739_mRNA GCA_005502385.1_00739 Glucose-6-phosphate 1-dehydrogenase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNTHTKHIPCLITIFGATGDLSHRKLFPSLFHLYQQDNLDEHIAIIGVGRRDYTNDFFREQVKQSIQTHVKDTDRLDEFIEHVFYFKNDVNEEESYHELLAFSNELDDTFKLEGNRLFYLAMAPQFFGPISDYLKASGLTETKGFKRLVIEKPFGSDFKSAEKLNNQLRQSFKEEEIYRIDHYLGKDMVQNIEVLRFANAMFEPLWNNKYISNIQITSSEILGVEDRGGYYESSGALKDMVQNHMLQMVALLAMEAPISLKSEDIRAEKVKVLKSLRQLKPEEVNQNFVRGQYGEGTINDQRVIAYRDEDRVASDSNTPTFVSGRLTIDNFRWAGVPFYIRTGKRMKSKCIQVVVEFKEVPMNLYYQTDRLLDSNLLVINIQPNEGISLHLNAKKSIQGIETKPVQLSYAMSAQDKMNTVDAYENLLFDCLKGDATNFTHWEELKSTWKFVDAIQEHWTMIDPNFPNYKSGTNGPIESDLLLSRDGNHWWDDIQ persistent 494 zwf glucose-6-phosphate dehydrogenase 1.1.1.363,1.1.1.49 GO:0004345,GO:0006006,GO:0006098,GO:0016614,GO:0050661 WP_017176267.1 UPI0002F3146B UniRef100_A0A4Q9WS15,UniRef50_Q5HP46,UniRef90_A0A4Q9WS15 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 213824 214744 . + . GCA_005502385.1_00740_gene GCA_005502385.1_00740 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEVTFFGTSAGLPTKDRNTQAIALNLEPYSNSIWLFDVGEGTQHQILHHSIKLGKVDHIFITHMHGDHIFGLPGLLTSRSFQGGEDKPLTLIGPTGLQQFIETALKLSESHLNYPITYIEIDNNFTYHHNGFTVSSRLLYHGIPSYGYRIEAPTTPGTIDVTALKAIGLEPGPKYQEVKMFDTFEYNNQIYLSKDFKGPAKPGPIVTIFGDTKPCDNEYILAENADIMIHEATYIDGDKILANNYHHSHIDDVFRLIHQSNVKKSFITHLSNRYNLEDIEEINRALKEMKDTPNFEFVKDFDTFKF . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 213824 214744 . + . GCA_005502385.1_00740_mRNA GCA_005502385.1_00740 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEVTFFGTSAGLPTKDRNTQAIALNLEPYSNSIWLFDVGEGTQHQILHHSIKLGKVDHIFITHMHGDHIFGLPGLLTSRSFQGGEDKPLTLIGPTGLQQFIETALKLSESHLNYPITYIEIDNNFTYHHNGFTVSSRLLYHGIPSYGYRIEAPTTPGTIDVTALKAIGLEPGPKYQEVKMFDTFEYNNQIYLSKDFKGPAKPGPIVTIFGDTKPCDNEYILAENADIMIHEATYIDGDKILANNYHHSHIDDVFRLIHQSNVKKSFITHLSNRYNLEDIEEINRALKEMKDTPNFEFVKDFDTFKF . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 213824 214744 . + 0 GCA_005502385.1_00740 GCA_005502385.1_00740_gene,GCA_005502385.1_00740_mRNA GCA_005502385.1_00740 Ribonuclease Z GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEVTFFGTSAGLPTKDRNTQAIALNLEPYSNSIWLFDVGEGTQHQILHHSIKLGKVDHIFITHMHGDHIFGLPGLLTSRSFQGGEDKPLTLIGPTGLQQFIETALKLSESHLNYPITYIEIDNNFTYHHNGFTVSSRLLYHGIPSYGYRIEAPTTPGTIDVTALKAIGLEPGPKYQEVKMFDTFEYNNQIYLSKDFKGPAKPGPIVTIFGDTKPCDNEYILAENADIMIHEATYIDGDKILANNYHHSHIDDVFRLIHQSNVKKSFITHLSNRYNLEDIEEINRALKEMKDTPNFEFVKDFDTFKF persistent 306 rnz ribonuclease Z 3.1.26.11 GO:0016891,GO:0042780 UniRef50_Q2FY67,UniRef90_A0AAE5JMP6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 214839 215654 . - . GCA_005502385.1_00741_gene GCA_005502385.1_00741 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKLVFYGAGNMAQAIFKGIIDSKILNHNDIYLTNKSNENTLKSFAKELGVKYSYDDAFLLKDADYVFLGTKPHDFETVASRIKSHIQSDHRFISIMAGLSINYIREKLETNNPVARIMPNTNAQVSHSVTGISFSGNFDPHSKDEVTELISAFGSVIEVDEEYLHQVTAITGSGPAFLYHVFEQYVKAGTSLGLEKKQVEESIKNLIIGTSKMIERSDLSMEQLRKNITSKGGTTQAGLNELDRHDIESIFKACLDAAVHRSIALSKSEDE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 214839 215654 . - . GCA_005502385.1_00741_mRNA GCA_005502385.1_00741 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKLVFYGAGNMAQAIFKGIIDSKILNHNDIYLTNKSNENTLKSFAKELGVKYSYDDAFLLKDADYVFLGTKPHDFETVASRIKSHIQSDHRFISIMAGLSINYIREKLETNNPVARIMPNTNAQVSHSVTGISFSGNFDPHSKDEVTELISAFGSVIEVDEEYLHQVTAITGSGPAFLYHVFEQYVKAGTSLGLEKKQVEESIKNLIIGTSKMIERSDLSMEQLRKNITSKGGTTQAGLNELDRHDIESIFKACLDAAVHRSIALSKSEDE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 214839 215654 . - 0 GCA_005502385.1_00741 GCA_005502385.1_00741_gene,GCA_005502385.1_00741_mRNA GCA_005502385.1_00741 Pyrroline-5-carboxylate reductase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKLVFYGAGNMAQAIFKGIIDSKILNHNDIYLTNKSNENTLKSFAKELGVKYSYDDAFLLKDADYVFLGTKPHDFETVASRIKSHIQSDHRFISIMAGLSINYIREKLETNNPVARIMPNTNAQVSHSVTGISFSGNFDPHSKDEVTELISAFGSVIEVDEEYLHQVTAITGSGPAFLYHVFEQYVKAGTSLGLEKKQVEESIKNLIIGTSKMIERSDLSMEQLRKNITSKGGTTQAGLNELDRHDIESIFKACLDAAVHRSIALSKSEDE persistent 271 proC pyrroline-5-carboxylate reductase 1.5.1.2 GO:0004735,GO:0006561 UniRef50_Q49XV0,UniRef90_A0A3S7GWQ3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 215759 216517 . + . GCA_005502385.1_00742_gene GCA_005502385.1_00742 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIVGKHFIVTGGTSGLDLEITKELLKKGAYITLIVRSTEKFENIKFNPYKHRVSMIKCNLQDISQIDNISKSLCYPIDGIIYSAGLGFFKSIQSHSLEEIMETYDVNVLGFITLFKTVKPYLTMNASIVAISSQAAFVTQANAAFYGSSKAALNGVLNALRIEEQDFHVMTVNPGPINTPFHKKADPSLKYANKYASLMIDPKILAEDIVKGIITRKVEINKPLWMNPLLKLYQLAPRKIEKYFTSLFKNKI . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 215759 216517 . + . GCA_005502385.1_00742_mRNA GCA_005502385.1_00742 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIVGKHFIVTGGTSGLDLEITKELLKKGAYITLIVRSTEKFENIKFNPYKHRVSMIKCNLQDISQIDNISKSLCYPIDGIIYSAGLGFFKSIQSHSLEEIMETYDVNVLGFITLFKTVKPYLTMNASIVAISSQAAFVTQANAAFYGSSKAALNGVLNALRIEEQDFHVMTVNPGPINTPFHKKADPSLKYANKYASLMIDPKILAEDIVKGIITRKVEINKPLWMNPLLKLYQLAPRKIEKYFTSLFKNKI . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 215759 216517 . + 0 GCA_005502385.1_00742 GCA_005502385.1_00742_gene,GCA_005502385.1_00742_mRNA GCA_005502385.1_00742 hypothetical protein """""" GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIVGKHFIVTGGTSGLDLEITKELLKKGAYITLIVRSTEKFENIKFNPYKHRVSMIKCNLQDISQIDNISKSLCYPIDGIIYSAGLGFFKSIQSHSLEEIMETYDVNVLGFITLFKTVKPYLTMNASIVAISSQAAFVTQANAAFYGSSKAALNGVLNALRIEEQDFHVMTVNPGPINTPFHKKADPSLKYANKYASLMIDPKILAEDIVKGIITRKVEINKPLWMNPLLKLYQLAPRKIEKYFTSLFKNKI persistent 252 SDR family NAD(P)-dependent oxidoreductase UniRef50_A0A7I8NJV3,UniRef90_A0A3S7GXW6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 216614 217522 . - . GCA_005502385.1_00743_gene GCA_005502385.1_00743 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQKNILKSGIEISELGLGCMSLGTEYHHAEEIIECAIENGITYFDTADIYDRGVNEDIVGKSLKKYQNRDDIVIGTKVGNRPLNDGSTTWDPSKKYIKESVKSSLKRLGLEQLDLYQLHGGTIDDPLDETISAFDELKKEGVIKAYGISSIRPNVIEYYLKHSQIETIMSQFNLIDNRPERLLNHIHSHGVKVLARGPVFKGLLTSNSVNVLDQKFSDGIFDYNYHELGETIASVKEVESNLSALSFEYLKSHDALGSIIVGASSVSQLKDNIANFNKTISLDQIKSARHRVKDLEYTQHLE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 216614 217522 . - . GCA_005502385.1_00743_mRNA GCA_005502385.1_00743 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQKNILKSGIEISELGLGCMSLGTEYHHAEEIIECAIENGITYFDTADIYDRGVNEDIVGKSLKKYQNRDDIVIGTKVGNRPLNDGSTTWDPSKKYIKESVKSSLKRLGLEQLDLYQLHGGTIDDPLDETISAFDELKKEGVIKAYGISSIRPNVIEYYLKHSQIETIMSQFNLIDNRPERLLNHIHSHGVKVLARGPVFKGLLTSNSVNVLDQKFSDGIFDYNYHELGETIASVKEVESNLSALSFEYLKSHDALGSIIVGASSVSQLKDNIANFNKTISLDQIKSARHRVKDLEYTQHLE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 216614 217522 . - 0 GCA_005502385.1_00743 GCA_005502385.1_00743_gene,GCA_005502385.1_00743_mRNA GCA_005502385.1_00743 1-deoxyxylulose-5-phosphate synthase YajO GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQKNILKSGIEISELGLGCMSLGTEYHHAEEIIECAIENGITYFDTADIYDRGVNEDIVGKSLKKYQNRDDIVIGTKVGNRPLNDGSTTWDPSKKYIKESVKSSLKRLGLEQLDLYQLHGGTIDDPLDETISAFDELKKEGVIKAYGISSIRPNVIEYYLKHSQIETIMSQFNLIDNRPERLLNHIHSHGVKVLARGPVFKGLLTSNSVNVLDQKFSDGIFDYNYHELGETIASVKEVESNLSALSFEYLKSHDALGSIIVGASSVSQLKDNIANFNKTISLDQIKSARHRVKDLEYTQHLE persistent 302 Aldo/keto reductase WP_070547767.1 UPI0008A128DC UniRef100_UPI0008A128DC,UniRef50_A0A380G9Q4,UniRef90_A0AAE5MZC6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 217604 218146 . + . GCA_005502385.1_00744_gene GCA_005502385.1_00744 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDFNEKTFDRTVIYNGKIIDLEIHDVELPDGKTSKREIIKHNGAVAICAITPEKEVLLVKQYRKPIEKPLLEIPAGKLEEDEEREEAAKRELEEETGYKANHLTFITHMYGSPGFSNEKLTIYFTDHLSVGELNLDDDEFVELHKIHLDDIHALLENHEIEDAKTMIALQYVLLNYNHSK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 217604 218146 . + . GCA_005502385.1_00744_mRNA GCA_005502385.1_00744 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDFNEKTFDRTVIYNGKIIDLEIHDVELPDGKTSKREIIKHNGAVAICAITPEKEVLLVKQYRKPIEKPLLEIPAGKLEEDEEREEAAKRELEEETGYKANHLTFITHMYGSPGFSNEKLTIYFTDHLSVGELNLDDDEFVELHKIHLDDIHALLENHEIEDAKTMIALQYVLLNYNHSK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 217604 218146 . + 0 GCA_005502385.1_00744 GCA_005502385.1_00744_gene,GCA_005502385.1_00744_mRNA GCA_005502385.1_00744 ADP-ribose pyrophosphatase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDFNEKTFDRTVIYNGKIIDLEIHDVELPDGKTSKREIIKHNGAVAICAITPEKEVLLVKQYRKPIEKPLLEIPAGKLEEDEEREEAAKRELEEETGYKANHLTFITHMYGSPGFSNEKLTIYFTDHLSVGELNLDDDEFVELHKIHLDDIHALLENHEIEDAKTMIALQYVLLNYNHSK persistent 180 NUDIX hydrolase WP_049420513.1 UPI00066B5D46 UniRef100_UPI00066B5D46,UniRef50_A0A8I0L781,UniRef90_A0A657M2K0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 218247 218693 . + . GCA_005502385.1_00745_gene GCA_005502385.1_00745 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEERLNRVKQQLQQSSYKLTPQREATVRVLIENEKDHLSAEDVYLKVKDKAPEIGLATVYRTLELLAELKVVDKINFGDGVARFDLRKEGAKHFHHHLVCMECGKVDEIHEDLLPKVEERVESEYQFKILDHRLTFHGICSECQAKGK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 218247 218693 . + . GCA_005502385.1_00745_mRNA GCA_005502385.1_00745 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEERLNRVKQQLQQSSYKLTPQREATVRVLIENEKDHLSAEDVYLKVKDKAPEIGLATVYRTLELLAELKVVDKINFGDGVARFDLRKEGAKHFHHHLVCMECGKVDEIHEDLLPKVEERVESEYQFKILDHRLTFHGICSECQAKGK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 218247 218693 . + 0 GCA_005502385.1_00745 GCA_005502385.1_00745_gene,GCA_005502385.1_00745_mRNA GCA_005502385.1_00745 Ferric uptake regulation protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEERLNRVKQQLQQSSYKLTPQREATVRVLIENEKDHLSAEDVYLKVKDKAPEIGLATVYRTLELLAELKVVDKINFGDGVARFDLRKEGAKHFHHHLVCMECGKVDEIHEDLLPKVEERVESEYQFKILDHRLTFHGICSECQAKGK persistent 148 fur Transcriptional regulator, Fur, putative COG0735,P WP_048679284.1 UPI00065FFC43 UniRef100_UPI00065FFC43,UniRef50_Q2FY73,UniRef90_Q2FY73 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 218858 219745 . + . GCA_005502385.1_00746_gene GCA_005502385.1_00746 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNTIIEEFLKFIQIEKGLSENTIGAYRRDLAKYEEYMKEHKIAHIDFIDRQVIQECLGYLIDQGASAKSMARFISTIRNFHQFALREKYAAKDPTVLIETPKYEKKLPDVLEVEEVIQLLETPDLNKKNGYRDRTILELLYATGMRVSELIQINIEDINLIMGFVRVFGKGNKERIIPLGDTVIEFLDTYLEKIRPQLLKKTITNVLFLNMHGRPLTRQGIWKMIKQYGSKANINKTLTPHTLRHSFATHLLENGADLRAVQEMLGHSDISTTQLYTHVSKSQIRQMYNQFHPRA . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 218858 219745 . + . GCA_005502385.1_00746_mRNA GCA_005502385.1_00746 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNTIIEEFLKFIQIEKGLSENTIGAYRRDLAKYEEYMKEHKIAHIDFIDRQVIQECLGYLIDQGASAKSMARFISTIRNFHQFALREKYAAKDPTVLIETPKYEKKLPDVLEVEEVIQLLETPDLNKKNGYRDRTILELLYATGMRVSELIQINIEDINLIMGFVRVFGKGNKERIIPLGDTVIEFLDTYLEKIRPQLLKKTITNVLFLNMHGRPLTRQGIWKMIKQYGSKANINKTLTPHTLRHSFATHLLENGADLRAVQEMLGHSDISTTQLYTHVSKSQIRQMYNQFHPRA . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 218858 219745 . + 0 GCA_005502385.1_00746 GCA_005502385.1_00746_gene,GCA_005502385.1_00746_mRNA GCA_005502385.1_00746 Tyrosine recombinase XerD GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNTIIEEFLKFIQIEKGLSENTIGAYRRDLAKYEEYMKEHKIAHIDFIDRQVIQECLGYLIDQGASAKSMARFISTIRNFHQFALREKYAAKDPTVLIETPKYEKKLPDVLEVEEVIQLLETPDLNKKNGYRDRTILELLYATGMRVSELIQINIEDINLIMGFVRVFGKGNKERIIPLGDTVIEFLDTYLEKIRPQLLKKTITNVLFLNMHGRPLTRQGIWKMIKQYGSKANINKTLTPHTLRHSFATHLLENGADLRAVQEMLGHSDISTTQLYTHVSKSQIRQMYNQFHPRA persistent 295 xerD site-specific tyrosine recombinase XerD GO:0006310,GO:0009009 WP_017176274.1 UPI0002DF17D3 UniRef100_A0A8X8GMV3,UniRef50_Q5HP53,UniRef90_A0A380FZ60 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 219771 220274 . - . GCA_005502385.1_00747_gene GCA_005502385.1_00747 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNKALSHFYYQFHTHQHYFLCHDILEELWKSNPNFSKKDAVVSLILFSTAMYHYRRCNKLGALKSFKKALYTFKHAKDKETLGLKVNEFTLLIQNQIEKVKHDQTFQPIQLPIKSAVERKIINLYPNYEYKTQINNDDMIVHCHRLRDRSDIIAARKKALKNKRKKS . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 219771 220274 . - . GCA_005502385.1_00747_mRNA GCA_005502385.1_00747 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNKALSHFYYQFHTHQHYFLCHDILEELWKSNPNFSKKDAVVSLILFSTAMYHYRRCNKLGALKSFKKALYTFKHAKDKETLGLKVNEFTLLIQNQIEKVKHDQTFQPIQLPIKSAVERKIINLYPNYEYKTQINNDDMIVHCHRLRDRSDIIAARKKALKNKRKKS . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 219771 220274 . - 0 GCA_005502385.1_00747 GCA_005502385.1_00747_gene,GCA_005502385.1_00747_mRNA GCA_005502385.1_00747 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNKALSHFYYQFHTHQHYFLCHDILEELWKSNPNFSKKDAVVSLILFSTAMYHYRRCNKLGALKSFKKALYTFKHAKDKETLGLKVNEFTLLIQNQIEKVKHDQTFQPIQLPIKSAVERKIINLYPNYEYKTQINNDDMIVHCHRLRDRSDIIAARKKALKNKRKKS persistent 167 DUF309 domain-containing protein WP_137689480.1 UPI0010F69878 UniRef100_UPI0010F69878,UniRef50_Q2FY75,UniRef90_A0A657M3Q5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 220373 221104 . + . GCA_005502385.1_00748_gene GCA_005502385.1_00748 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYEVKLDAFNGPLDLLLHLIHKYEIDIYDIPMKALTEQYMQYVHAMKEVEINIASEYLVMASELLMIKSRLLLPQQETENDLEEDPREELVGRLIEYQNYKEYSLLLTELKKERELYYTKSPADLSHLEKETHWDKNQTIDLTQLIVAYQRVKNRVALNTPKAVEISKDTFTIQQATEVVAKHLEKQTSFNFFSLFNFNESVSKVVTHFLAILEMSKAGLINIEQSNNFEDINIIRGVNYSIG . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 220373 221104 . + . GCA_005502385.1_00748_mRNA GCA_005502385.1_00748 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYEVKLDAFNGPLDLLLHLIHKYEIDIYDIPMKALTEQYMQYVHAMKEVEINIASEYLVMASELLMIKSRLLLPQQETENDLEEDPREELVGRLIEYQNYKEYSLLLTELKKERELYYTKSPADLSHLEKETHWDKNQTIDLTQLIVAYQRVKNRVALNTPKAVEISKDTFTIQQATEVVAKHLEKQTSFNFFSLFNFNESVSKVVTHFLAILEMSKAGLINIEQSNNFEDINIIRGVNYSIG . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 220373 221104 . + 0 GCA_005502385.1_00748 GCA_005502385.1_00748_gene,GCA_005502385.1_00748_mRNA GCA_005502385.1_00748 Segregation and condensation protein A GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYEVKLDAFNGPLDLLLHLIHKYEIDIYDIPMKALTEQYMQYVHAMKEVEINIASEYLVMASELLMIKSRLLLPQQETENDLEEDPREELVGRLIEYQNYKEYSLLLTELKKERELYYTKSPADLSHLEKETHWDKNQTIDLTQLIVAYQRVKNRVALNTPKAVEISKDTFTIQQATEVVAKHLEKQTSFNFFSLFNFNESVSKVVTHFLAILEMSKAGLINIEQSNNFEDINIIRGVNYSIG persistent 243 Segregation and condensation protein A WP_048679292.1 UPI0006602D23 UniRef100_UPI0006602D23,UniRef50_Q6GGK3,UniRef90_A0A974KYX3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 221097 221630 . + . GCA_005502385.1_00749_gene GCA_005502385.1_00749 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDNIGIIESLLFTVGDEGLEAGQLADILKMDLDELDQLISTYHSKGLEIQRYGSIYMLTSKKESAPFIEVLVNQKANMKLSQAAMETLSIIAYNQPLTRSDIEVTRGINSDGAVRTLIARGLIEAKDMENSRSHLLMTTDLFLNVFGMKSIEELPSTEEDNEEIENFFSTLTEQKEK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 221097 221630 . + . GCA_005502385.1_00749_mRNA GCA_005502385.1_00749 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDNIGIIESLLFTVGDEGLEAGQLADILKMDLDELDQLISTYHSKGLEIQRYGSIYMLTSKKESAPFIEVLVNQKANMKLSQAAMETLSIIAYNQPLTRSDIEVTRGINSDGAVRTLIARGLIEAKDMENSRSHLLMTTDLFLNVFGMKSIEELPSTEEDNEEIENFFSTLTEQKEK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 221097 221630 . + 0 GCA_005502385.1_00749 GCA_005502385.1_00749_gene,GCA_005502385.1_00749_mRNA GCA_005502385.1_00749 Segregation and condensation protein B GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDNIGIIESLLFTVGDEGLEAGQLADILKMDLDELDQLISTYHSKGLEIQRYGSIYMLTSKKESAPFIEVLVNQKANMKLSQAAMETLSIIAYNQPLTRSDIEVTRGINSDGAVRTLIARGLIEAKDMENSRSHLLMTTDLFLNVFGMKSIEELPSTEEDNEEIENFFSTLTEQKEK persistent 177 scpB SMC-Scp complex subunit ScpB GO:0005515,GO:0007059 WP_049382022.1 UPI00066E880D UniRef100_UPI00066E880D,UniRef50_Q2FY77,UniRef90_A0AAE5JQ53 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 221632 222369 . + . GCA_005502385.1_00750_gene GCA_005502385.1_00750 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNKDLERLQKRIANSGYTSRRKAETLITEGKVKVNGQVVTELGTKVKSSDTVEVEGIKIEQEDKIYILFYKPTQVITSVSDDRGRTVVTDYFKDLEARIYPVGRLDYDTSGLLLLTNDGEFTNLMTHPRYHIQKKYVAKLKGYLMREEVKALEQGIELEDGFTQPAQVKIKNQNKEKNTTLVEITISEGRNRQVRRMFEHFNHTVDKLIRIEFGNLNLKGLNAGEGRVLTPHEVKILRHMAENGN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 221632 222369 . + . GCA_005502385.1_00750_mRNA GCA_005502385.1_00750 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNKDLERLQKRIANSGYTSRRKAETLITEGKVKVNGQVVTELGTKVKSSDTVEVEGIKIEQEDKIYILFYKPTQVITSVSDDRGRTVVTDYFKDLEARIYPVGRLDYDTSGLLLLTNDGEFTNLMTHPRYHIQKKYVAKLKGYLMREEVKALEQGIELEDGFTQPAQVKIKNQNKEKNTTLVEITISEGRNRQVRRMFEHFNHTVDKLIRIEFGNLNLKGLNAGEGRVLTPHEVKILRHMAENGN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 221632 222369 . + 0 GCA_005502385.1_00750 GCA_005502385.1_00750_gene,GCA_005502385.1_00750_mRNA GCA_005502385.1_00750 Ribosomal large subunit pseudouridine synthase B GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNKDLERLQKRIANSGYTSRRKAETLITEGKVKVNGQVVTELGTKVKSSDTVEVEGIKIEQEDKIYILFYKPTQVITSVSDDRGRTVVTDYFKDLEARIYPVGRLDYDTSGLLLLTNDGEFTNLMTHPRYHIQKKYVAKLKGYLMREEVKALEQGIELEDGFTQPAQVKIKNQNKEKNTTLVEITISEGRNRQVRRMFEHFNHTVDKLIRIEFGNLNLKGLNAGEGRVLTPHEVKILRHMAENGN persistent 245 Pseudouridine synthase 5.4.99.22 WP_017176278.1 UPI0002DCBD84 UniRef100_A0A1L8Y7G8,UniRef50_A0A090YKY4,UniRef90_A0A380G1R5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 222576 223301 . + . GCA_005502385.1_00751_gene GCA_005502385.1_00751 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMNEILIVDDEDRIRRLLKLYLERESFTIHEASDGREAYELAMENDYACILLDLMLPEMDGIEMSSKLREHKDTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRRTQTSKPEQSEPHARDVIEFNHLIIDNDAHRVLADQQQVNLTPKEYELLIYLAKTPNKVFDREQLLKEVWHYEFYGDLRTVDTHVKRLREKLNRVSEEAAHMIQTVWGVGYKFEVNTNDESTK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 222576 223301 . + . GCA_005502385.1_00751_mRNA GCA_005502385.1_00751 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMNEILIVDDEDRIRRLLKLYLERESFTIHEASDGREAYELAMENDYACILLDLMLPEMDGIEMSSKLREHKDTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRRTQTSKPEQSEPHARDVIEFNHLIIDNDAHRVLADQQQVNLTPKEYELLIYLAKTPNKVFDREQLLKEVWHYEFYGDLRTVDTHVKRLREKLNRVSEEAAHMIQTVWGVGYKFEVNTNDESTK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 222576 223301 . + 0 GCA_005502385.1_00751 GCA_005502385.1_00751_gene,GCA_005502385.1_00751_mRNA GCA_005502385.1_00751 Transcriptional regulatory protein SrrA GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMNEILIVDDEDRIRRLLKLYLERESFTIHEASDGREAYELAMENDYACILLDLMLPEMDGIEMSSKLREHKDTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRRTQTSKPEQSEPHARDVIEFNHLIIDNDAHRVLADQQQVNLTPKEYELLIYLAKTPNKVFDREQLLKEVWHYEFYGDLRTVDTHVKRLREKLNRVSEEAAHMIQTVWGVGYKFEVNTNDESTK persistent 241 srrA Transcriptional regulatory protein SrrA GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993 COG0745,TK WP_048681466.1 UPI0006605365 UniRef100_UPI0006605365,UniRef50_P35163,UniRef90_Q2FY79 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 223282 225051 . + . GCA_005502385.1_00752_gene GCA_005502385.1_00752 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMNRLNSVVIKLWLTIIFIVTTVLILLSAALITFIQYYYTQQTENAIREDASRISHLVEKADNKSLAIQHSQELIDGTGGVIIMSNKNMSAEKSYNLIKKRMLKEIQNNDNFNKVFDTGKSATQNVTISEKGASHSYILLGYPMQSQDRKHAKFSGVFIYQDLKTIEDTNNAITIIILITAIVFLIVSTIFAFFLSNRITKPLRKLSTQAINVSNGDYSQKTTVNTKDEIGELSYTFNNMSYKIQEHIEALSTQKNIRDRLFNSMIEGVVGLNDKSEIILSNKMADQILPTIDKSIYSEIKNQINATFHSKGTEFNEYTINSKYYVFIMSYIDRIQQDGRSGIVTIIRDMTNEHNLDQMKKDFIANVSHELRTPISLLQGYTESIVDGIVTEPNEIKESLSIVLDETKRLNRLVNELLNVARMDAEGLAINKEIQPIMPLLRKIQLKYRQQAQDLELNIDLLPNINEDDLWNYDADRIDQVLTNLIDNATRYTHPGDSITITANKDSQYQILNIKDTGSGIAPEHLDHVFDRFYKVEASRTRGKQGTGLGLFISKMIIQEHGGIISVESTVNKGTTFIIKLPKPSIDSK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 223282 225051 . + . GCA_005502385.1_00752_mRNA GCA_005502385.1_00752 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMNRLNSVVIKLWLTIIFIVTTVLILLSAALITFIQYYYTQQTENAIREDASRISHLVEKADNKSLAIQHSQELIDGTGGVIIMSNKNMSAEKSYNLIKKRMLKEIQNNDNFNKVFDTGKSATQNVTISEKGASHSYILLGYPMQSQDRKHAKFSGVFIYQDLKTIEDTNNAITIIILITAIVFLIVSTIFAFFLSNRITKPLRKLSTQAINVSNGDYSQKTTVNTKDEIGELSYTFNNMSYKIQEHIEALSTQKNIRDRLFNSMIEGVVGLNDKSEIILSNKMADQILPTIDKSIYSEIKNQINATFHSKGTEFNEYTINSKYYVFIMSYIDRIQQDGRSGIVTIIRDMTNEHNLDQMKKDFIANVSHELRTPISLLQGYTESIVDGIVTEPNEIKESLSIVLDETKRLNRLVNELLNVARMDAEGLAINKEIQPIMPLLRKIQLKYRQQAQDLELNIDLLPNINEDDLWNYDADRIDQVLTNLIDNATRYTHPGDSITITANKDSQYQILNIKDTGSGIAPEHLDHVFDRFYKVEASRTRGKQGTGLGLFISKMIIQEHGGIISVESTVNKGTTFIIKLPKPSIDSK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 223282 225051 . + 0 GCA_005502385.1_00752 GCA_005502385.1_00752_gene,GCA_005502385.1_00752_mRNA GCA_005502385.1_00752 Sensor protein SrrB GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMNRLNSVVIKLWLTIIFIVTTVLILLSAALITFIQYYYTQQTENAIREDASRISHLVEKADNKSLAIQHSQELIDGTGGVIIMSNKNMSAEKSYNLIKKRMLKEIQNNDNFNKVFDTGKSATQNVTISEKGASHSYILLGYPMQSQDRKHAKFSGVFIYQDLKTIEDTNNAITIIILITAIVFLIVSTIFAFFLSNRITKPLRKLSTQAINVSNGDYSQKTTVNTKDEIGELSYTFNNMSYKIQEHIEALSTQKNIRDRLFNSMIEGVVGLNDKSEIILSNKMADQILPTIDKSIYSEIKNQINATFHSKGTEFNEYTINSKYYVFIMSYIDRIQQDGRSGIVTIIRDMTNEHNLDQMKKDFIANVSHELRTPISLLQGYTESIVDGIVTEPNEIKESLSIVLDETKRLNRLVNELLNVARMDAEGLAINKEIQPIMPLLRKIQLKYRQQAQDLELNIDLLPNINEDDLWNYDADRIDQVLTNLIDNATRYTHPGDSITITANKDSQYQILNIKDTGSGIAPEHLDHVFDRFYKVEASRTRGKQGTGLGLFISKMIIQEHGGIISVESTVNKGTTFIIKLPKPSIDSK persistent 589 srrB Sensor protein SrrB 2.7.13.3 WP_017176280.1 UPI0002DC4325 UniRef100_A0A4Q9WS01,UniRef50_Q9L523,UniRef90_A0A3S7GWR3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 225297 225424 . + . GCA_005502385.1_00753_gene GCA_005502385.1_00753 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 225297 225424 . + . GCA_005502385.1_00753_mRNA GCA_005502385.1_00753 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 Infernal:001001 misc_RNA 225297 225424 118.4 + . GCA_005502385.1_00753 GCA_005502385.1_00753_gene,GCA_005502385.1_00753_mRNA GCA_005502385.1_00753 FMN GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 225489 226034 . + . GCA_005502385.1_00754_gene GCA_005502385.1_00754 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQQNKRLITISMLSAIAFILTFLKFPLPFLPPYLTLDFSDVPTLLATFIFGPLSGLLVALIKNILNFLFNIGDPVGPVANFLAGASFLLTAYFVSHRKQYSSRRSLIIGLVAGTIAMTIVLSILNYFVLLPLYGMIFNLGDVFTNLKVIILSGIIPFNIIKGCVISIIFILLYRRLKKVLK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 225489 226034 . + . GCA_005502385.1_00754_mRNA GCA_005502385.1_00754 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQQNKRLITISMLSAIAFILTFLKFPLPFLPPYLTLDFSDVPTLLATFIFGPLSGLLVALIKNILNFLFNIGDPVGPVANFLAGASFLLTAYFVSHRKQYSSRRSLIIGLVAGTIAMTIVLSILNYFVLLPLYGMIFNLGDVFTNLKVIILSGIIPFNIIKGCVISIIFILLYRRLKKVLK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 225489 226034 . + 0 GCA_005502385.1_00754 GCA_005502385.1_00754_gene,GCA_005502385.1_00754_mRNA GCA_005502385.1_00754 Riboflavin transporter RibU GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQQNKRLITISMLSAIAFILTFLKFPLPFLPPYLTLDFSDVPTLLATFIFGPLSGLLVALIKNILNFLFNIGDPVGPVANFLAGASFLLTAYFVSHRKQYSSRRSLIIGLVAGTIAMTIVLSILNYFVLLPLYGMIFNLGDVFTNLKVIILSGIIPFNIIKGCVISIIFILLYRRLKKVLK persistent 181 Riboflavin transporter WP_002449844.1 UPI00019FA730 UniRef100_A0A1L8Y7K0,UniRef50_E5QVT2,UniRef90_A0A6N0I448 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 226118 226366 . - . GCA_005502385.1_00755_gene GCA_005502385.1_00755 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKYTIVDMDTCIACGACGAAAPDIYDYDDEGIAFVILDDNQGTAEVPEELYEDMEDALEGCPTDSIKIEEEPFDGDALKFE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 226118 226366 . - . GCA_005502385.1_00755_mRNA GCA_005502385.1_00755 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKYTIVDMDTCIACGACGAAAPDIYDYDDEGIAFVILDDNQGTAEVPEELYEDMEDALEGCPTDSIKIEEEPFDGDALKFE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 226118 226366 . - 0 GCA_005502385.1_00755 GCA_005502385.1_00755_gene,GCA_005502385.1_00755_mRNA GCA_005502385.1_00755 Ferredoxin GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKYTIVDMDTCIACGACGAAAPDIYDYDDEGIAFVILDDNQGTAEVPEELYEDMEDALEGCPTDSIKIEEEPFDGDALKFE persistent 82 fer Ferredoxin C,COG1141 WP_002449743.1 UPI000054BB0C UniRef100_A0A380G0Z4,UniRef50_P50727,UniRef90_A0A380G0Z4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 226463 227428 . + . GCA_005502385.1_00756_gene GCA_005502385.1_00756 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQEMISYVKHHSFNYKTNKSIYNILSGKKSHQTFFDASSQQLLSLYHSLPKLKYQTFERLLNKNDIKELNIKVHPRFTYDSLNNTFKCIQLLIQTISQYLHHQLKFVPMNQQVIIQNKVKKVYGTIIENDLIKDFENEVTDLFQAISLNNNNKCYLHYYLHGYDEPMYTRQQVSLIENISISKLYTLELNNLVTLGSEIENKQRYPILSECIILSSLLNKTSITQQYLHQGLSLNEIAIAQNVKLNTIEDHILELFIKGYEKNYENYVGKKDIFQFTQYYTEHKGERLKRYKQEFDHLSYFEIKLMIVGIERGEMNVREQS . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 226463 227428 . + . GCA_005502385.1_00756_mRNA GCA_005502385.1_00756 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQEMISYVKHHSFNYKTNKSIYNILSGKKSHQTFFDASSQQLLSLYHSLPKLKYQTFERLLNKNDIKELNIKVHPRFTYDSLNNTFKCIQLLIQTISQYLHHQLKFVPMNQQVIIQNKVKKVYGTIIENDLIKDFENEVTDLFQAISLNNNNKCYLHYYLHGYDEPMYTRQQVSLIENISISKLYTLELNNLVTLGSEIENKQRYPILSECIILSSLLNKTSITQQYLHQGLSLNEIAIAQNVKLNTIEDHILELFIKGYEKNYENYVGKKDIFQFTQYYTEHKGERLKRYKQEFDHLSYFEIKLMIVGIERGEMNVREQS . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 226463 227428 . + 0 GCA_005502385.1_00756 GCA_005502385.1_00756_gene,GCA_005502385.1_00756_mRNA GCA_005502385.1_00756 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQEMISYVKHHSFNYKTNKSIYNILSGKKSHQTFFDASSQQLLSLYHSLPKLKYQTFERLLNKNDIKELNIKVHPRFTYDSLNNTFKCIQLLIQTISQYLHHQLKFVPMNQQVIIQNKVKKVYGTIIENDLIKDFENEVTDLFQAISLNNNNKCYLHYYLHGYDEPMYTRQQVSLIENISISKLYTLELNNLVTLGSEIENKQRYPILSECIILSSLLNKTSITQQYLHQGLSLNEIAIAQNVKLNTIEDHILELFIKGYEKNYENYVGKKDIFQFTQYYTEHKGERLKRYKQEFDHLSYFEIKLMIVGIERGEMNVREQS persistent 321 Helicase Helix-turn-helix domain-containing protein WP_017176281.1 UPI0002FD641B UniRef100_A0A8X8KER3,UniRef50_Q2FYE9,UniRef90_A0A974KXQ0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 227409 228788 . + . GCA_005502385.1_00757_gene GCA_005502385.1_00757 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLENNLKQWFGHESFHPGQKEVIESVLQGNHTLGVLPTGSGKSLCYQFPTYMQQKPTLIISPLISLMDDQVMQLKSQGERRVVCIHSGMDEQEKKENINVLNQSRFIFLSPEFILQSHHFNLIKNIPFGLVVLDEAHCLSEWGYDFRPHYALIGQITHHFKLATILALTATAPPHLTSDLEHILKVKLNTIQTTMNRKNISLSHFNFKDDDEKIEWLLKFIESSGPTIIYVSSKKICLQLAKLIYQHGYLTGIYHGDLTYQERQTVQNQFINNFIPVIVATSAFGMGVNKKDIRTVIHFHLSSSPSNYLQEIGRAGRDGKQSQAISLYQPDDAYILETLLFNDAIVSEDVETFELGAFLPPNKEEILTVLHQNYTFKELKHIFKTSYIRKQAGYQRIIGYTRIDQCRRKFLLEFFGESPNQSNECCDNDSDLSKIECYNRKKVKRQFTFNEKIKNLFRV . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 227409 228788 . + . GCA_005502385.1_00757_mRNA GCA_005502385.1_00757 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLENNLKQWFGHESFHPGQKEVIESVLQGNHTLGVLPTGSGKSLCYQFPTYMQQKPTLIISPLISLMDDQVMQLKSQGERRVVCIHSGMDEQEKKENINVLNQSRFIFLSPEFILQSHHFNLIKNIPFGLVVLDEAHCLSEWGYDFRPHYALIGQITHHFKLATILALTATAPPHLTSDLEHILKVKLNTIQTTMNRKNISLSHFNFKDDDEKIEWLLKFIESSGPTIIYVSSKKICLQLAKLIYQHGYLTGIYHGDLTYQERQTVQNQFINNFIPVIVATSAFGMGVNKKDIRTVIHFHLSSSPSNYLQEIGRAGRDGKQSQAISLYQPDDAYILETLLFNDAIVSEDVETFELGAFLPPNKEEILTVLHQNYTFKELKHIFKTSYIRKQAGYQRIIGYTRIDQCRRKFLLEFFGESPNQSNECCDNDSDLSKIECYNRKKVKRQFTFNEKIKNLFRV . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 227409 228788 . + 0 GCA_005502385.1_00757 GCA_005502385.1_00757_gene,GCA_005502385.1_00757_mRNA GCA_005502385.1_00757 ATP-dependent DNA helicase RecQ GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLENNLKQWFGHESFHPGQKEVIESVLQGNHTLGVLPTGSGKSLCYQFPTYMQQKPTLIISPLISLMDDQVMQLKSQGERRVVCIHSGMDEQEKKENINVLNQSRFIFLSPEFILQSHHFNLIKNIPFGLVVLDEAHCLSEWGYDFRPHYALIGQITHHFKLATILALTATAPPHLTSDLEHILKVKLNTIQTTMNRKNISLSHFNFKDDDEKIEWLLKFIESSGPTIIYVSSKKICLQLAKLIYQHGYLTGIYHGDLTYQERQTVQNQFINNFIPVIVATSAFGMGVNKKDIRTVIHFHLSSSPSNYLQEIGRAGRDGKQSQAISLYQPDDAYILETLLFNDAIVSEDVETFELGAFLPPNKEEILTVLHQNYTFKELKHIFKTSYIRKQAGYQRIIGYTRIDQCRRKFLLEFFGESPNQSNECCDNDSDLSKIECYNRKKVKRQFTFNEKIKNLFRV persistent 459 recQ ATP-dependent DNA helicase RecQ WP_017176282.1 UPI0002FD5379 UniRef100_A0A4Q9WS07,UniRef50_A0A380G6G1,UniRef90_A0A6N0I445 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 228936 230456 . + . GCA_005502385.1_00758_gene GCA_005502385.1_00758 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSRDNFKDDFEKNRQSIDSNDQFDRVNNETNDEIDNFNNETDQQFPPRNAQRRQRRRNQSSSRNKKFNDQVNDYEEGSLDDRYDEETFDKVHNESNSHHNHENDENNQRSNIDEHYDERNRHSNLNDRHNDDDRRNNSNHRFEDDSYENDDNSDDRMNSDHRRHRDFDQDNDRHEDHHSKIGKDATIAGGAAATGAVGAKASRNKKRKNNRHDEENYRDNENRSVQHDNEDNNELDNKHHRKKGNKGKKAAAVGAGAAGAGAAGAAASKHKHHNEHNNLNHHDDDKHREYEDNDGFQAHNGKKKRGLMGILLPLIALLLILAALAIFIGMYLNNDHKDKNNNTADNKTEQTENKDKDKDNATNEKDQSNETAATKEDKSSESDNSTKKDSDESNEVATTENSTSNDNNDKNSTENATSENDNNKSNVYNNSSSSDNNSNSQSTQNNTQSSNSVGQQTHVVSGNDNLYRIAIQYYGEGTVENVNKLKRANGLTSNNIVNGQKLVIPQ . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 228936 230456 . + . GCA_005502385.1_00758_mRNA GCA_005502385.1_00758 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSRDNFKDDFEKNRQSIDSNDQFDRVNNETNDEIDNFNNETDQQFPPRNAQRRQRRRNQSSSRNKKFNDQVNDYEEGSLDDRYDEETFDKVHNESNSHHNHENDENNQRSNIDEHYDERNRHSNLNDRHNDDDRRNNSNHRFEDDSYENDDNSDDRMNSDHRRHRDFDQDNDRHEDHHSKIGKDATIAGGAAATGAVGAKASRNKKRKNNRHDEENYRDNENRSVQHDNEDNNELDNKHHRKKGNKGKKAAAVGAGAAGAGAAGAAASKHKHHNEHNNLNHHDDDKHREYEDNDGFQAHNGKKKRGLMGILLPLIALLLILAALAIFIGMYLNNDHKDKNNNTADNKTEQTENKDKDKDNATNEKDQSNETAATKEDKSSESDNSTKKDSDESNEVATTENSTSNDNNDKNSTENATSENDNNKSNVYNNSSSSDNNSNSQSTQNNTQSSNSVGQQTHVVSGNDNLYRIAIQYYGEGTVENVNKLKRANGLTSNNIVNGQKLVIPQ . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 228936 230456 . + 0 GCA_005502385.1_00758 GCA_005502385.1_00758_gene,GCA_005502385.1_00758_mRNA GCA_005502385.1_00758 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSRDNFKDDFEKNRQSIDSNDQFDRVNNETNDEIDNFNNETDQQFPPRNAQRRQRRRNQSSSRNKKFNDQVNDYEEGSLDDRYDEETFDKVHNESNSHHNHENDENNQRSNIDEHYDERNRHSNLNDRHNDDDRRNNSNHRFEDDSYENDDNSDDRMNSDHRRHRDFDQDNDRHEDHHSKIGKDATIAGGAAATGAVGAKASRNKKRKNNRHDEENYRDNENRSVQHDNEDNNELDNKHHRKKGNKGKKAAAVGAGAAGAGAAGAAASKHKHHNEHNNLNHHDDDKHREYEDNDGFQAHNGKKKRGLMGILLPLIALLLILAALAIFIGMYLNNDHKDKNNNTADNKTEQTENKDKDKDNATNEKDQSNETAATKEDKSSESDNSTKKDSDESNEVATTENSTSNDNNDKNSTENATSENDNNKSNVYNNSSSSDNNSNSQSTQNNTQSSNSVGQQTHVVSGNDNLYRIAIQYYGEGTVENVNKLKRANGLTSNNIVNGQKLVIPQ persistent 506 ebpS elastin-binding protein EbpS WP_137689481.1 UPI000AB84363 UniRef100_UPI000AB84363,UniRef50_Q4L6I5,UniRef90_A0A8X8KHU0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 230607 231593 . + . GCA_005502385.1_00759_gene GCA_005502385.1_00759 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQTIESIIIGGGPCGLSAAIEQKKKGIETLVIEKGNIVDAIYHYPTHQTFFSSSDKLSIGDVPFIVEESKPRRNQALVYYREVVKFHQLNVHPFEEVLTVKKIGNKFTITTTKDVYECKFLTVATGYYGQHNTLDVKGADLSKVKHYFKEAHPYFNQDVVVIGGKNSAVDAALELEKAGANVTVLYRGDRYSAAIKPWILPNFESLVNHEKIDMEFDTNVTEITQHSVTYEKNGETVTIPNDFVFAMIGYHPDYEFLQSIGIDIHTNEFGTAPIYNKETYETNVENCYIAGVIAAGNDNNSIFIENGKYHGGIIAQNILRKKQTPLES . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 230607 231593 . + . GCA_005502385.1_00759_mRNA GCA_005502385.1_00759 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQTIESIIIGGGPCGLSAAIEQKKKGIETLVIEKGNIVDAIYHYPTHQTFFSSSDKLSIGDVPFIVEESKPRRNQALVYYREVVKFHQLNVHPFEEVLTVKKIGNKFTITTTKDVYECKFLTVATGYYGQHNTLDVKGADLSKVKHYFKEAHPYFNQDVVVIGGKNSAVDAALELEKAGANVTVLYRGDRYSAAIKPWILPNFESLVNHEKIDMEFDTNVTEITQHSVTYEKNGETVTIPNDFVFAMIGYHPDYEFLQSIGIDIHTNEFGTAPIYNKETYETNVENCYIAGVIAAGNDNNSIFIENGKYHGGIIAQNILRKKQTPLES . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 230607 231593 . + 0 GCA_005502385.1_00759 GCA_005502385.1_00759_gene,GCA_005502385.1_00759_mRNA GCA_005502385.1_00759 Ferredoxin--NADP reductase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQTIESIIIGGGPCGLSAAIEQKKKGIETLVIEKGNIVDAIYHYPTHQTFFSSSDKLSIGDVPFIVEESKPRRNQALVYYREVVKFHQLNVHPFEEVLTVKKIGNKFTITTTKDVYECKFLTVATGYYGQHNTLDVKGADLSKVKHYFKEAHPYFNQDVVVIGGKNSAVDAALELEKAGANVTVLYRGDRYSAAIKPWILPNFESLVNHEKIDMEFDTNVTEITQHSVTYEKNGETVTIPNDFVFAMIGYHPDYEFLQSIGIDIHTNEFGTAPIYNKETYETNVENCYIAGVIAAGNDNNSIFIENGKYHGGIIAQNILRKKQTPLES persistent 328 ypdA YpdA family putative bacillithiol disulfide reductase 1.8.1.- UniRef50_A0A380G2E5,UniRef90_A0A657M3R5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 231656 232624 . - . GCA_005502385.1_00760_gene GCA_005502385.1_00760 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKILVIHTGGTISMSQNQLNQVVTNDINPISLHKNIIGQYANVYEISPFNVPSPHITLSHVIKLKDIIIKEFSKNHYDGCVITHGTDTLEETAYLLDLTIDISQPIVITGAMRSSNEIGSDGLYNFISAIRVATSLEASDKGVMVVFNDEIHTARNVTKTHTSNINTFQSPNQGPLGILTKDRVQFYNRPYRQTVFPRIDESLNVPLIKAYMGMTKDVLEFYAQQNVQGIIIEALGQGNLPPSCLKGIESCVKKDIPIVLVSRSFNGIVSPVYDYEGGGFRLAEEGLIFSNGLNGPKARLKLLIGLSNHMNHKELKEYFET . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 231656 232624 . - . GCA_005502385.1_00760_mRNA GCA_005502385.1_00760 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKILVIHTGGTISMSQNQLNQVVTNDINPISLHKNIIGQYANVYEISPFNVPSPHITLSHVIKLKDIIIKEFSKNHYDGCVITHGTDTLEETAYLLDLTIDISQPIVITGAMRSSNEIGSDGLYNFISAIRVATSLEASDKGVMVVFNDEIHTARNVTKTHTSNINTFQSPNQGPLGILTKDRVQFYNRPYRQTVFPRIDESLNVPLIKAYMGMTKDVLEFYAQQNVQGIIIEALGQGNLPPSCLKGIESCVKKDIPIVLVSRSFNGIVSPVYDYEGGGFRLAEEGLIFSNGLNGPKARLKLLIGLSNHMNHKELKEYFET . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 231656 232624 . - 0 GCA_005502385.1_00760 GCA_005502385.1_00760_gene,GCA_005502385.1_00760_mRNA GCA_005502385.1_00760 L-asparaginase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKILVIHTGGTISMSQNQLNQVVTNDINPISLHKNIIGQYANVYEISPFNVPSPHITLSHVIKLKDIIIKEFSKNHYDGCVITHGTDTLEETAYLLDLTIDISQPIVITGAMRSSNEIGSDGLYNFISAIRVATSLEASDKGVMVVFNDEIHTARNVTKTHTSNINTFQSPNQGPLGILTKDRVQFYNRPYRQTVFPRIDESLNVPLIKAYMGMTKDVLEFYAQQNVQGIIIEALGQGNLPPSCLKGIESCVKKDIPIVLVSRSFNGIVSPVYDYEGGGFRLAEEGLIFSNGLNGPKARLKLLIGLSNHMNHKELKEYFET persistent 322 Asparaginase WP_017176285.1 UPI0002DF9A16 UniRef100_A0A4Q9WS32,UniRef50_K8E262,UniRef90_A0A657M2M1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 232700 233356 . + . GCA_005502385.1_00761_gene GCA_005502385.1_00761 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNPINIALDGPAAAGKSTIARQVASKLSMIYVDTGAMYRAITYKYLKQDAPEDFQNLINHTSLELTYNPSKGQRIILDNEDVTDYLRENDVTQHVSYVASKEPVRTYAVQKQKELAIKKGIVMDGRDIGTVVLPDAELKVYMIASVDERAERRQKENELRGISSTLNQLKKEIEERDHYDMNRDISPLRKAEDAITVDTTSKTIEEVTEEILKLVENL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 232700 233356 . + . GCA_005502385.1_00761_mRNA GCA_005502385.1_00761 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNPINIALDGPAAAGKSTIARQVASKLSMIYVDTGAMYRAITYKYLKQDAPEDFQNLINHTSLELTYNPSKGQRIILDNEDVTDYLRENDVTQHVSYVASKEPVRTYAVQKQKELAIKKGIVMDGRDIGTVVLPDAELKVYMIASVDERAERRQKENELRGISSTLNQLKKEIEERDHYDMNRDISPLRKAEDAITVDTTSKTIEEVTEEILKLVENL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 232700 233356 . + 0 GCA_005502385.1_00761 GCA_005502385.1_00761_gene,GCA_005502385.1_00761_mRNA GCA_005502385.1_00761 Cytidylate kinase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNPINIALDGPAAAGKSTIARQVASKLSMIYVDTGAMYRAITYKYLKQDAPEDFQNLINHTSLELTYNPSKGQRIILDNEDVTDYLRENDVTQHVSYVASKEPVRTYAVQKQKELAIKKGIVMDGRDIGTVVLPDAELKVYMIASVDERAERRQKENELRGISSTLNQLKKEIEERDHYDMNRDISPLRKAEDAITVDTTSKTIEEVTEEILKLVENL persistent 218 cmk (d)CMP kinase 2.7.4.25 GO:0004127,GO:0005524,GO:0015949 WP_017176286.1 UPI00031C4934 UniRef100_A0A4Q9WT52,UniRef50_B9DNU7,UniRef90_A0A6N0I477 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 233663 234844 . + . GCA_005502385.1_00762_gene GCA_005502385.1_00762 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMTEEFNESMINDIKEGDKVTAKVQQVEDKQVVVHIDGAKYNGIIPISQLSTHHIENPSEIISEGDEIEAYVTKIEIDEENESGAYILSKRQLETEKSYEYLQEKLDNDEVIEAKVTEVVKGGLVVDVGQRGFVPASLISTDFIEDFSVFEGQTIRLKVEELDPENNRVILSRKAVEQAENDVKKASLLDSLNEGDVIKGKVARLTNFGAFVDIGGVDGLVHVSELSHEHVQSPEDVVSVGQEVDVKVKSVEKDSERISLSIKDTLPTPFENIKGKFHENDVIEGKVIRLANFGAFVEIAPGVQGLVHISEIAHKHIGTPSEVLEPGQQVSVKILGIDEENERISLSIKATLPNEDVIESDEATTQSYLSNETDEDNPTLGDVFGDKFKNLKF . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 233663 234844 . + . GCA_005502385.1_00762_mRNA GCA_005502385.1_00762 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMTEEFNESMINDIKEGDKVTAKVQQVEDKQVVVHIDGAKYNGIIPISQLSTHHIENPSEIISEGDEIEAYVTKIEIDEENESGAYILSKRQLETEKSYEYLQEKLDNDEVIEAKVTEVVKGGLVVDVGQRGFVPASLISTDFIEDFSVFEGQTIRLKVEELDPENNRVILSRKAVEQAENDVKKASLLDSLNEGDVIKGKVARLTNFGAFVDIGGVDGLVHVSELSHEHVQSPEDVVSVGQEVDVKVKSVEKDSERISLSIKDTLPTPFENIKGKFHENDVIEGKVIRLANFGAFVEIAPGVQGLVHISEIAHKHIGTPSEVLEPGQQVSVKILGIDEENERISLSIKATLPNEDVIESDEATTQSYLSNETDEDNPTLGDVFGDKFKNLKF . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 233663 234844 . + 0 GCA_005502385.1_00762 GCA_005502385.1_00762_gene,GCA_005502385.1_00762_mRNA GCA_005502385.1_00762 30S ribosomal protein S1 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMTEEFNESMINDIKEGDKVTAKVQQVEDKQVVVHIDGAKYNGIIPISQLSTHHIENPSEIISEGDEIEAYVTKIEIDEENESGAYILSKRQLETEKSYEYLQEKLDNDEVIEAKVTEVVKGGLVVDVGQRGFVPASLISTDFIEDFSVFEGQTIRLKVEELDPENNRVILSRKAVEQAENDVKKASLLDSLNEGDVIKGKVARLTNFGAFVDIGGVDGLVHVSELSHEHVQSPEDVVSVGQEVDVKVKSVEKDSERISLSIKDTLPTPFENIKGKFHENDVIEGKVIRLANFGAFVEIAPGVQGLVHISEIAHKHIGTPSEVLEPGQQVSVKILGIDEENERISLSIKATLPNEDVIESDEATTQSYLSNETDEDNPTLGDVFGDKFKNLKF persistent 393 rpsA 30S ribosomal protein S1 GO:0003676,GO:0003729,GO:0003735,GO:0006412,GO:0022627 COG0539,J UniRef50_Q4L6I1,UniRef90_Q4L6I1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 235029 236339 . + . GCA_005502385.1_00763_gene GCA_005502385.1_00763 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTKPIVAIVGRPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGIEIGNAPFQTQIRAQAEIAIDEADVIIFMVNVREGLTQSDEMVAQLLYKSKKPVVLAVNKVDNPEMRSDIFDFYSLGFGDPYPISGSHGLGLGDLLDEVVKHFKEEDSDPYDDDTIRLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAVDTEYSYDGQDYVLIDTAGMRKKGKVYESTEKYSVLRALKAIERSNVVLLVIDAEEGIIEQDKRVAGYAHEEGKAMVIVVNKWDAVEKDTNTMKKFADDVRNQFQFLDYAPIAFVSAKERLRLKTLFPYIREASENHKKRVQSSTLNEVVTDAISMNPTPTDKGRRLNVFYTTQVAIEPPTFVVFVNDVELMHFSYKRYLENQIRDAFGFEGTPIHIIPRRRN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 235029 236339 . + . GCA_005502385.1_00763_mRNA GCA_005502385.1_00763 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTKPIVAIVGRPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGIEIGNAPFQTQIRAQAEIAIDEADVIIFMVNVREGLTQSDEMVAQLLYKSKKPVVLAVNKVDNPEMRSDIFDFYSLGFGDPYPISGSHGLGLGDLLDEVVKHFKEEDSDPYDDDTIRLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAVDTEYSYDGQDYVLIDTAGMRKKGKVYESTEKYSVLRALKAIERSNVVLLVIDAEEGIIEQDKRVAGYAHEEGKAMVIVVNKWDAVEKDTNTMKKFADDVRNQFQFLDYAPIAFVSAKERLRLKTLFPYIREASENHKKRVQSSTLNEVVTDAISMNPTPTDKGRRLNVFYTTQVAIEPPTFVVFVNDVELMHFSYKRYLENQIRDAFGFEGTPIHIIPRRRN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 235029 236339 . + 0 GCA_005502385.1_00763 GCA_005502385.1_00763_gene,GCA_005502385.1_00763_mRNA GCA_005502385.1_00763 GTPase Der GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTKPIVAIVGRPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGIEIGNAPFQTQIRAQAEIAIDEADVIIFMVNVREGLTQSDEMVAQLLYKSKKPVVLAVNKVDNPEMRSDIFDFYSLGFGDPYPISGSHGLGLGDLLDEVVKHFKEEDSDPYDDDTIRLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAVDTEYSYDGQDYVLIDTAGMRKKGKVYESTEKYSVLRALKAIERSNVVLLVIDAEEGIIEQDKRVAGYAHEEGKAMVIVVNKWDAVEKDTNTMKKFADDVRNQFQFLDYAPIAFVSAKERLRLKTLFPYIREASENHKKRVQSSTLNEVVTDAISMNPTPTDKGRRLNVFYTTQVAIEPPTFVVFVNDVELMHFSYKRYLENQIRDAFGFEGTPIHIIPRRRN persistent 436 der ribosome biogenesis GTPase Der 3.6.5.- GO:0003924,GO:0005525,GO:0005737,GO:0042254,GO:0043022 COG1160,J WP_017176288.1 UPI0002F9B182 UniRef100_A0A4Q9WS12,UniRef50_P50743,UniRef90_Q2FYG0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 236354 237352 . + . GCA_005502385.1_00764_gene GCA_005502385.1_00764 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTKITVFGTGSFGTALANVLAENGHSVLMWGKNENTVDEINQSHQNKRYLKDVTLNETIKATSQLEQAVNFSDIFLIALPTKAIRNVVTEIDQHIKTKKTFIHVAKGIENETFKRVSEMIEDSVSKNHKNGVGVLSGPSHAEEVVIKQPTTVAASSKDEHISKLIQDLFMNDYLRVYTNNDLIGVELGGALKNIIAVASGIVAGMGYGDNAKAALMTRGLAEISRLGEKLGADPMTFLGLGGIGDLIVTCTSTHSRNYTLGYKLGKGKTTEEALNEMNMVVEGIYTTNSVYHLAKSQNVDMPITNALYKVLFEDKPVKDSVKDLMGRDKKAE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 236354 237352 . + . GCA_005502385.1_00764_mRNA GCA_005502385.1_00764 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTKITVFGTGSFGTALANVLAENGHSVLMWGKNENTVDEINQSHQNKRYLKDVTLNETIKATSQLEQAVNFSDIFLIALPTKAIRNVVTEIDQHIKTKKTFIHVAKGIENETFKRVSEMIEDSVSKNHKNGVGVLSGPSHAEEVVIKQPTTVAASSKDEHISKLIQDLFMNDYLRVYTNNDLIGVELGGALKNIIAVASGIVAGMGYGDNAKAALMTRGLAEISRLGEKLGADPMTFLGLGGIGDLIVTCTSTHSRNYTLGYKLGKGKTTEEALNEMNMVVEGIYTTNSVYHLAKSQNVDMPITNALYKVLFEDKPVKDSVKDLMGRDKKAE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 236354 237352 . + 0 GCA_005502385.1_00764 GCA_005502385.1_00764_gene,GCA_005502385.1_00764_mRNA GCA_005502385.1_00764 Glycerol-3-phosphate dehydrogenase [NAD(P)+] GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTKITVFGTGSFGTALANVLAENGHSVLMWGKNENTVDEINQSHQNKRYLKDVTLNETIKATSQLEQAVNFSDIFLIALPTKAIRNVVTEIDQHIKTKKTFIHVAKGIENETFKRVSEMIEDSVSKNHKNGVGVLSGPSHAEEVVIKQPTTVAASSKDEHISKLIQDLFMNDYLRVYTNNDLIGVELGGALKNIIAVASGIVAGMGYGDNAKAALMTRGLAEISRLGEKLGADPMTFLGLGGIGDLIVTCTSTHSRNYTLGYKLGKGKTTEEALNEMNMVVEGIYTTNSVYHLAKSQNVDMPITNALYKVLFEDKPVKDSVKDLMGRDKKAE persistent 332 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1.1.1.94 GO:0009331,GO:0046168,GO:0047952,GO:0051287 WP_017176289.1 UPI00030915C2 UniRef100_A0A3S7GS15,UniRef50_P46919,UniRef90_A0A3S7GS15 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 237521 237793 . + . GCA_005502385.1_00765_gene GCA_005502385.1_00765 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNKTDLINAVAEQADLTKKEAGSAVDAVFESIQNSLSKGEKVQLIGFGNFEVRERAARKGRNPQTGKEIEIPASKVPAFKAGKALKDAVK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 237521 237793 . + . GCA_005502385.1_00765_mRNA GCA_005502385.1_00765 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNKTDLINAVAEQADLTKKEAGSAVDAVFESIQNSLSKGEKVQLIGFGNFEVRERAARKGRNPQTGKEIEIPASKVPAFKAGKALKDAVK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 237521 237793 . + 0 GCA_005502385.1_00765 GCA_005502385.1_00765_gene,GCA_005502385.1_00765_mRNA GCA_005502385.1_00765 DNA-binding protein HU GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNKTDLINAVAEQADLTKKEAGSAVDAVFESIQNSLSKGEKVQLIGFGNFEVRERAARKGRNPQTGKEIEIPASKVPAFKAGKALKDAVK persistent 90 hupA DNA-binding protein II HBsu B,COG0776 WP_002449794.1 UPI00019FA726 UniRef100_A0A1L8Y7G5,UniRef50_A0A838EBI8,UniRef90_A0A380H5H7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 237982 238563 . + . GCA_005502385.1_00766_gene GCA_005502385.1_00766 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MERTLSKLNRQITQRLKGINEYEAIHINKGLSDVLDHFNIPENAKLACLTIDTSMKHLDDISKNKLSKKSILIGDLLSAHFYTLISEIGDVSYQRLMSEAIIKSNELKTSLHHHSLERHDIYKAVLDIETLFPFITISHFTDIEISQYEIFEKLFNGVHQYYPSYLSEYDEDEINQIIKHIKQSDKEKSRGNN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 237982 238563 . + . GCA_005502385.1_00766_mRNA GCA_005502385.1_00766 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MERTLSKLNRQITQRLKGINEYEAIHINKGLSDVLDHFNIPENAKLACLTIDTSMKHLDDISKNKLSKKSILIGDLLSAHFYTLISEIGDVSYQRLMSEAIIKSNELKTSLHHHSLERHDIYKAVLDIETLFPFITISHFTDIEISQYEIFEKLFNGVHQYYPSYLSEYDEDEINQIIKHIKQSDKEKSRGNN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 237982 238563 . + 0 GCA_005502385.1_00766 GCA_005502385.1_00766_gene,GCA_005502385.1_00766_mRNA GCA_005502385.1_00766 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MERTLSKLNRQITQRLKGINEYEAIHINKGLSDVLDHFNIPENAKLACLTIDTSMKHLDDISKNKLSKKSILIGDLLSAHFYTLISEIGDVSYQRLMSEAIIKSNELKTSLHHHSLERHDIYKAVLDIETLFPFITISHFTDIEISQYEIFEKLFNGVHQYYPSYLSEYDEDEINQIIKHIKQSDKEKSRGNN persistent 193 Heptaprenyl pyrophosphate synthase subunit A 2.5.1.30 WP_017176290.1 UPI0002E8CC6B UniRef100_A0A4V2KXD1,UniRef50_Q2FYG4,UniRef90_A0A974QNB7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 238563 239264 . + . GCA_005502385.1_00767_gene GCA_005502385.1_00767 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTENNAKKEQVHTVFQNISKKYDRLNNIISFEQHKIWRKHVMKDMNVLPGSKALDVCCGTADWTIALSRAVGPNGEVTGLDFSENMLEVGKEKTKSMPNIHLVHGDAMNLPFEDNTFDYVTIGFGLRNVPDYLATLKELNRVLKPGGMIVCLETSQPTLPVFKQVYKLYFKFVMPIFGKLFAKSKEEYEWLQQSTFNFPDKTKLKRLFEQAGFSHVKVRSFTGGVAAMHLGYK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 238563 239264 . + . GCA_005502385.1_00767_mRNA GCA_005502385.1_00767 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTENNAKKEQVHTVFQNISKKYDRLNNIISFEQHKIWRKHVMKDMNVLPGSKALDVCCGTADWTIALSRAVGPNGEVTGLDFSENMLEVGKEKTKSMPNIHLVHGDAMNLPFEDNTFDYVTIGFGLRNVPDYLATLKELNRVLKPGGMIVCLETSQPTLPVFKQVYKLYFKFVMPIFGKLFAKSKEEYEWLQQSTFNFPDKTKLKRLFEQAGFSHVKVRSFTGGVAAMHLGYK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 238563 239264 . + 0 GCA_005502385.1_00767 GCA_005502385.1_00767_gene,GCA_005502385.1_00767_mRNA GCA_005502385.1_00767 Demethylmenaquinone methyltransferase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTENNAKKEQVHTVFQNISKKYDRLNNIISFEQHKIWRKHVMKDMNVLPGSKALDVCCGTADWTIALSRAVGPNGEVTGLDFSENMLEVGKEKTKSMPNIHLVHGDAMNLPFEDNTFDYVTIGFGLRNVPDYLATLKELNRVLKPGGMIVCLETSQPTLPVFKQVYKLYFKFVMPIFGKLFAKSKEEYEWLQQSTFNFPDKTKLKRLFEQAGFSHVKVRSFTGGVAAMHLGYK persistent 233 menG demethylmenaquinone methyltransferase 2.1.1.163 GO:0008168,GO:0009234,GO:0032259,GO:0043770 COG2226,HJ WP_017176291.1 UPI0002D27215 UniRef100_A0A4Q9WS16,UniRef50_P31113,UniRef90_Q4L6H3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 239294 240250 . + . GCA_005502385.1_00768_gene GCA_005502385.1_00768 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKLSMNSEIKNVEKRLKNAIKSNDSVLQEAAFHLLSSGGKRVRPAFVLLSSQFGPKKITEDTYHVAVALELIHMATLVHDDVIDKSDKRRGKLTIEKKWDVTTAILTGNFLLALGLKQLSKIEDHRVHTIISNAIVDVCRGELFQFQDQFNSHQNITNYLRRINRKTALLIQLSTEVGAITSQADNETIRKLKMIGHYIGMSFQIVDDILDFTSTEKKLGKPVGSDLMNGHITLPVLLEMKKDPVFKKQIAELSHLTNKNQFGPLIDQIKNSNSITQSQEVSDHYLNKALDLIDQLEEPNAQNLFRKLIKRMRSRNT . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 239294 240250 . + . GCA_005502385.1_00768_mRNA GCA_005502385.1_00768 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKLSMNSEIKNVEKRLKNAIKSNDSVLQEAAFHLLSSGGKRVRPAFVLLSSQFGPKKITEDTYHVAVALELIHMATLVHDDVIDKSDKRRGKLTIEKKWDVTTAILTGNFLLALGLKQLSKIEDHRVHTIISNAIVDVCRGELFQFQDQFNSHQNITNYLRRINRKTALLIQLSTEVGAITSQADNETIRKLKMIGHYIGMSFQIVDDILDFTSTEKKLGKPVGSDLMNGHITLPVLLEMKKDPVFKKQIAELSHLTNKNQFGPLIDQIKNSNSITQSQEVSDHYLNKALDLIDQLEEPNAQNLFRKLIKRMRSRNT . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 239294 240250 . + 0 GCA_005502385.1_00768 GCA_005502385.1_00768_gene,GCA_005502385.1_00768_mRNA GCA_005502385.1_00768 Heptaprenyl diphosphate synthase component 2 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKLSMNSEIKNVEKRLKNAIKSNDSVLQEAAFHLLSSGGKRVRPAFVLLSSQFGPKKITEDTYHVAVALELIHMATLVHDDVIDKSDKRRGKLTIEKKWDVTTAILTGNFLLALGLKQLSKIEDHRVHTIISNAIVDVCRGELFQFQDQFNSHQNITNYLRRINRKTALLIQLSTEVGAITSQADNETIRKLKMIGHYIGMSFQIVDDILDFTSTEKKLGKPVGSDLMNGHITLPVLLEMKKDPVFKKQIAELSHLTNKNQFGPLIDQIKNSNSITQSQEVSDHYLNKALDLIDQLEEPNAQNLFRKLIKRMRSRNT persistent 318 Heptaprenyl diphosphate synthase 2.5.1.30 WP_017176292.1 UPI00030AB390 UniRef100_A0A4Q9WS20,UniRef50_A0A0D6HKK2,UniRef90_A0AAE5JMP7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 240368 240820 . + . GCA_005502385.1_00769_gene GCA_005502385.1_00769 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MERTFLMIKPDAVQRNLIGEIISRIERKGLKIVGGKFIIPTKDTVNVHYAEHTEKPFFHKLVSFLTSGPVFAMVVEGEDAVAVSRHIIGKTNPTEADPGTIRGDYGLTVGRNIIHGSDSVESAEREINLWFNDDEIYSYEAIRENWLYEE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 240368 240820 . + . GCA_005502385.1_00769_mRNA GCA_005502385.1_00769 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MERTFLMIKPDAVQRNLIGEIISRIERKGLKIVGGKFIIPTKDTVNVHYAEHTEKPFFHKLVSFLTSGPVFAMVVEGEDAVAVSRHIIGKTNPTEADPGTIRGDYGLTVGRNIIHGSDSVESAEREINLWFNDDEIYSYEAIRENWLYEE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 240368 240820 . + 0 GCA_005502385.1_00769 GCA_005502385.1_00769_gene,GCA_005502385.1_00769_mRNA GCA_005502385.1_00769 Nucleoside diphosphate kinase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MERTFLMIKPDAVQRNLIGEIISRIERKGLKIVGGKFIIPTKDTVNVHYAEHTEKPFFHKLVSFLTSGPVFAMVVEGEDAVAVSRHIIGKTNPTEADPGTIRGDYGLTVGRNIIHGSDSVESAEREINLWFNDDEIYSYEAIRENWLYEE persistent 150 ndk nucleoside-diphosphate kinase 2.7.4.6 GO:0004550 WP_017176293.1 UPI0003013ADB UniRef100_A0A4Q9WU79,UniRef50_P22887,UniRef90_A0A4Q9WU79 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 241050 242216 . + . GCA_005502385.1_00770_gene GCA_005502385.1_00770 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRYLTSGESHGPQLTVIIEGVPANLEMRAEEINKEMFKRQGGYGRGRRMQIEKDAVEIVSGVRNGFTLGSPITIVVKNDDFTHWRNIMGIEPISDEARENMKRTITKPRPGHADLIGGMKYNHRDLRNVLERSSARETAARVAVGAVSKILLSQLDIHMYSRVVEIGGIKDEGLYDTETFKQNIDKNDVRVIDESIAQKMRDKIDEAKKEGDSIGGVVQVMVENMPVAVGSYVHYDRKLDGRIAQGVVSINAFKGVSFGEGFKAAEKPGSEIQDEILYHSERGYYRGSNHLGGFEGGMTNGMPIIVNGVMKPIPTLYKPLNSVDINTKEDFKATIERSDSCAVPAASVVCEHVVAFEVAKALLEEFQSNHIDQLKEQIEERRKLNIEF . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 241050 242216 . + . GCA_005502385.1_00770_mRNA GCA_005502385.1_00770 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRYLTSGESHGPQLTVIIEGVPANLEMRAEEINKEMFKRQGGYGRGRRMQIEKDAVEIVSGVRNGFTLGSPITIVVKNDDFTHWRNIMGIEPISDEARENMKRTITKPRPGHADLIGGMKYNHRDLRNVLERSSARETAARVAVGAVSKILLSQLDIHMYSRVVEIGGIKDEGLYDTETFKQNIDKNDVRVIDESIAQKMRDKIDEAKKEGDSIGGVVQVMVENMPVAVGSYVHYDRKLDGRIAQGVVSINAFKGVSFGEGFKAAEKPGSEIQDEILYHSERGYYRGSNHLGGFEGGMTNGMPIIVNGVMKPIPTLYKPLNSVDINTKEDFKATIERSDSCAVPAASVVCEHVVAFEVAKALLEEFQSNHIDQLKEQIEERRKLNIEF . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 241050 242216 . + 0 GCA_005502385.1_00770 GCA_005502385.1_00770_gene,GCA_005502385.1_00770_mRNA GCA_005502385.1_00770 Chorismate synthase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRYLTSGESHGPQLTVIIEGVPANLEMRAEEINKEMFKRQGGYGRGRRMQIEKDAVEIVSGVRNGFTLGSPITIVVKNDDFTHWRNIMGIEPISDEARENMKRTITKPRPGHADLIGGMKYNHRDLRNVLERSSARETAARVAVGAVSKILLSQLDIHMYSRVVEIGGIKDEGLYDTETFKQNIDKNDVRVIDESIAQKMRDKIDEAKKEGDSIGGVVQVMVENMPVAVGSYVHYDRKLDGRIAQGVVSINAFKGVSFGEGFKAAEKPGSEIQDEILYHSERGYYRGSNHLGGFEGGMTNGMPIIVNGVMKPIPTLYKPLNSVDINTKEDFKATIERSDSCAVPAASVVCEHVVAFEVAKALLEEFQSNHIDQLKEQIEERRKLNIEF persistent 388 aroC chorismate synthase 4.2.3.5 GO:0004107,GO:0005829,GO:0008652,GO:0009073,GO:0009423,GO:0010181 COG0082,E WP_017176294.1 UPI0002E93FE6 UniRef100_A0A3S7GSK6,UniRef50_P31104,UniRef90_Q4L6H0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 242254 243318 . + . GCA_005502385.1_00771_gene GCA_005502385.1_00771 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQLQTTYHSNNYPIIVEHHAFKYLSEYIQDYDKVFLIIDEFVDFNFRDKFETICHNSNIQKVIVPAGEKMKTFNHYQAIMEQLLGMNLTRNTCLVAIGGGATGDFTGFLASTLLRGVDFIQVPTTILAHDSSVGGKVGINSSHGKNLIGAFYRPKAVIYDLDFLKTLPYHEILSGYAEVYKHALLTGTVATEDIEKHFSDRKTLESLKDMDQFIFKGIKTKLNIIIKDEKESNVRKYLNLGHTFGHAVEYKYKIPHGHAIMIGMIYQFIVANHLLGTQFDIQHYINYMNQLNYPLDLIQQIDFEEMYQYMLSDKKNNGEGIQMVLLEKLGKPNVYHVEKNILKQSFKQLQLLVE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 242254 243318 . + . GCA_005502385.1_00771_mRNA GCA_005502385.1_00771 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQLQTTYHSNNYPIIVEHHAFKYLSEYIQDYDKVFLIIDEFVDFNFRDKFETICHNSNIQKVIVPAGEKMKTFNHYQAIMEQLLGMNLTRNTCLVAIGGGATGDFTGFLASTLLRGVDFIQVPTTILAHDSSVGGKVGINSSHGKNLIGAFYRPKAVIYDLDFLKTLPYHEILSGYAEVYKHALLTGTVATEDIEKHFSDRKTLESLKDMDQFIFKGIKTKLNIIIKDEKESNVRKYLNLGHTFGHAVEYKYKIPHGHAIMIGMIYQFIVANHLLGTQFDIQHYINYMNQLNYPLDLIQQIDFEEMYQYMLSDKKNNGEGIQMVLLEKLGKPNVYHVEKNILKQSFKQLQLLVE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 242254 243318 . + 0 GCA_005502385.1_00771 GCA_005502385.1_00771_gene,GCA_005502385.1_00771_mRNA GCA_005502385.1_00771 3-dehydroquinate synthase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQLQTTYHSNNYPIIVEHHAFKYLSEYIQDYDKVFLIIDEFVDFNFRDKFETICHNSNIQKVIVPAGEKMKTFNHYQAIMEQLLGMNLTRNTCLVAIGGGATGDFTGFLASTLLRGVDFIQVPTTILAHDSSVGGKVGINSSHGKNLIGAFYRPKAVIYDLDFLKTLPYHEILSGYAEVYKHALLTGTVATEDIEKHFSDRKTLESLKDMDQFIFKGIKTKLNIIIKDEKESNVRKYLNLGHTFGHAVEYKYKIPHGHAIMIGMIYQFIVANHLLGTQFDIQHYINYMNQLNYPLDLIQQIDFEEMYQYMLSDKKNNGEGIQMVLLEKLGKPNVYHVEKNILKQSFKQLQLLVE persistent 354 aroB 3-dehydroquinate synthase 4.2.3.4 GO:0003856,GO:0005737,GO:0009073,GO:0009423 WP_037541037.1 UPI0004531A1C UniRef100_A0A3S7GSK0,UniRef50_Q6GGU4,UniRef90_A0A3S7GSK0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 243329 244627 . + . GCA_005502385.1_00772_gene GCA_005502385.1_00772 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTTSQIIDIHGPLKGEIEVPGDKSMTHRAIMLSSLAKGKSIIEQPLLGEDCLRTIEIFKLLGVEIEIEEHRLIVNSPGYQHFNIPHQTLYTGNSGTTTRLLAGLLSGLGIECVLSGDASIGKRPMNRVLRPLKLMNANINGIENNYTPLIIKPSAINGINYQMEVASAQVKSAILFASLFSKDASQITELDISRNHTETMFKHYQIPIQVNQKVITTSPYAISNIQPKDFVVPGDISSAAFFIVAALISPGSDITIHNVGINPTRSGIIDIVEQMNGNIELFNVTESSEPTASIRVQYTNNLKPITIEGDLIPKAIDELPIIALLCTQASGTSMIKDAEELKVKETNRIDTTADMLNLLGFKLQATEDGLIIHPSKLTRNAIVDSLTDHRIGMMLAVASILSDSPLTIRQFDAVNVSFPGFLPKLKLLENEG . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 243329 244627 . + . GCA_005502385.1_00772_mRNA GCA_005502385.1_00772 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTTSQIIDIHGPLKGEIEVPGDKSMTHRAIMLSSLAKGKSIIEQPLLGEDCLRTIEIFKLLGVEIEIEEHRLIVNSPGYQHFNIPHQTLYTGNSGTTTRLLAGLLSGLGIECVLSGDASIGKRPMNRVLRPLKLMNANINGIENNYTPLIIKPSAINGINYQMEVASAQVKSAILFASLFSKDASQITELDISRNHTETMFKHYQIPIQVNQKVITTSPYAISNIQPKDFVVPGDISSAAFFIVAALISPGSDITIHNVGINPTRSGIIDIVEQMNGNIELFNVTESSEPTASIRVQYTNNLKPITIEGDLIPKAIDELPIIALLCTQASGTSMIKDAEELKVKETNRIDTTADMLNLLGFKLQATEDGLIIHPSKLTRNAIVDSLTDHRIGMMLAVASILSDSPLTIRQFDAVNVSFPGFLPKLKLLENEG . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 243329 244627 . + 0 GCA_005502385.1_00772 GCA_005502385.1_00772_gene,GCA_005502385.1_00772_mRNA GCA_005502385.1_00772 3-phosphoshikimate 1-carboxyvinyltransferase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTTSQIIDIHGPLKGEIEVPGDKSMTHRAIMLSSLAKGKSIIEQPLLGEDCLRTIEIFKLLGVEIEIEEHRLIVNSPGYQHFNIPHQTLYTGNSGTTTRLLAGLLSGLGIECVLSGDASIGKRPMNRVLRPLKLMNANINGIENNYTPLIIKPSAINGINYQMEVASAQVKSAILFASLFSKDASQITELDISRNHTETMFKHYQIPIQVNQKVITTSPYAISNIQPKDFVVPGDISSAAFFIVAALISPGSDITIHNVGINPTRSGIIDIVEQMNGNIELFNVTESSEPTASIRVQYTNNLKPITIEGDLIPKAIDELPIIALLCTQASGTSMIKDAEELKVKETNRIDTTADMLNLLGFKLQATEDGLIIHPSKLTRNAIVDSLTDHRIGMMLAVASILSDSPLTIRQFDAVNVSFPGFLPKLKLLENEG persistent 432 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 2.5.1.19 GO:0003866,GO:0009073 WP_017176296.1 UPI0002F4E484 UniRef100_A0A8X8KGY4,UniRef50_Q05615,UniRef90_A0A3S7GVC0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 244634 245878 . + . GCA_005502385.1_00773_gene GCA_005502385.1_00773 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEDIYKLIDDINLQKLDHLDTRVNEALTSNNDDALFILGETLYNFGLTPQGLEVFRTLYHKYPDESELLIYFIEGLMSENQTDEALEYLNQVELSPEKLMLEADLYQQINMTEVAIDKLTEARELEPNDPIIHFALAELLYFDGQYLRATREYEVVLDTGEYEINGINLFSRMADCALQSGNYSDAIQLFDEISEDEMISDDFFKKAIAYEKNDLTQEAIKIMTTLLSKDPDFIQGYFYLQSLYENEKNYPDAIETGKEGLRLNQFYKELMVSTGSLEIEHGDANEGVELLKKALEVDNAYHEPLLILSDLFRQEEDYEAIISLLSYVDEEDLDPVFMWHLAHAYGEEERDTEAQHFYELAYPTLKSQSLFLSDYYFYLIEIGQKDKAKVLLNELLIIDPTNETWNEELSRLND . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 244634 245878 . + . GCA_005502385.1_00773_mRNA GCA_005502385.1_00773 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEDIYKLIDDINLQKLDHLDTRVNEALTSNNDDALFILGETLYNFGLTPQGLEVFRTLYHKYPDESELLIYFIEGLMSENQTDEALEYLNQVELSPEKLMLEADLYQQINMTEVAIDKLTEARELEPNDPIIHFALAELLYFDGQYLRATREYEVVLDTGEYEINGINLFSRMADCALQSGNYSDAIQLFDEISEDEMISDDFFKKAIAYEKNDLTQEAIKIMTTLLSKDPDFIQGYFYLQSLYENEKNYPDAIETGKEGLRLNQFYKELMVSTGSLEIEHGDANEGVELLKKALEVDNAYHEPLLILSDLFRQEEDYEAIISLLSYVDEEDLDPVFMWHLAHAYGEEERDTEAQHFYELAYPTLKSQSLFLSDYYFYLIEIGQKDKAKVLLNELLIIDPTNETWNEELSRLND . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 244634 245878 . + 0 GCA_005502385.1_00773 GCA_005502385.1_00773_gene,GCA_005502385.1_00773_mRNA GCA_005502385.1_00773 Beta-barrel assembly-enhancing protease GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEDIYKLIDDINLQKLDHLDTRVNEALTSNNDDALFILGETLYNFGLTPQGLEVFRTLYHKYPDESELLIYFIEGLMSENQTDEALEYLNQVELSPEKLMLEADLYQQINMTEVAIDKLTEARELEPNDPIIHFALAELLYFDGQYLRATREYEVVLDTGEYEINGINLFSRMADCALQSGNYSDAIQLFDEISEDEMISDDFFKKAIAYEKNDLTQEAIKIMTTLLSKDPDFIQGYFYLQSLYENEKNYPDAIETGKEGLRLNQFYKELMVSTGSLEIEHGDANEGVELLKKALEVDNAYHEPLLILSDLFRQEEDYEAIISLLSYVDEEDLDPVFMWHLAHAYGEEERDTEAQHFYELAYPTLKSQSLFLSDYYFYLIEIGQKDKAKVLLNELLIIDPTNETWNEELSRLND persistent 414 Tetratricopeptide repeat protein WP_017176297.1 UPI000311C350 UniRef100_A0A2A1MEM6,UniRef50_Q49XR9,UniRef90_A0A2A1MEM6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 245893 246432 . + . GCA_005502385.1_00774_gene GCA_005502385.1_00774 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNDTLVKMKQSYIEYALFHYHFKSRISVWLLNYLKASPLKLNCSHFVNKKIKSHITLEIGLKHSNFSAIKLTKDDQTLINTNEIFNYIASKDICIDIFIHFEYNDEQDWRLNELIIQQLIYSDQYLAYLNNIYHLNLDLNKKYSLIEQLEHHIDVSLQMKDQQRFYQLSQILSVLTHHS . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 245893 246432 . + . GCA_005502385.1_00774_mRNA GCA_005502385.1_00774 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNDTLVKMKQSYIEYALFHYHFKSRISVWLLNYLKASPLKLNCSHFVNKKIKSHITLEIGLKHSNFSAIKLTKDDQTLINTNEIFNYIASKDICIDIFIHFEYNDEQDWRLNELIIQQLIYSDQYLAYLNNIYHLNLDLNKKYSLIEQLEHHIDVSLQMKDQQRFYQLSQILSVLTHHS . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 245893 246432 . + 0 GCA_005502385.1_00774 GCA_005502385.1_00774_gene,GCA_005502385.1_00774_mRNA GCA_005502385.1_00774 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNDTLVKMKQSYIEYALFHYHFKSRISVWLLNYLKASPLKLNCSHFVNKKIKSHITLEIGLKHSNFSAIKLTKDDQTLINTNEIFNYIASKDICIDIFIHFEYNDEQDWRLNELIIQQLIYSDQYLAYLNNIYHLNLDLNKKYSLIEQLEHHIDVSLQMKDQQRFYQLSQILSVLTHHS persistent 179 IDEAL domain-containing protein WP_017176298.1 UPI00030CF986 UniRef100_A0A4Q9WVB2,UniRef50_A0AAE5JNC1,UniRef90_A0AAE5JNC1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 246458 247075 . + . GCA_005502385.1_00775_gene GCA_005502385.1_00775 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPTLRQLWELSLYQRSILVILLICNVLGTIYGFIWYGDQLLKTQWHYLIFVPDSPIASLFLCISICLIILNKQNSIIEGLAFVTLFKYGLWAVIMNFIMIINNDDITIMNVFLIISHGIMVLESIYFYPRFKISMLSLFISMIWVFNNDYVDYILKKYPYYDFIQQHVNLVAFIALWLSIISLMLYYNFNKLIKVKLFDKKIDSQ . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 246458 247075 . + . GCA_005502385.1_00775_mRNA GCA_005502385.1_00775 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPTLRQLWELSLYQRSILVILLICNVLGTIYGFIWYGDQLLKTQWHYLIFVPDSPIASLFLCISICLIILNKQNSIIEGLAFVTLFKYGLWAVIMNFIMIINNDDITIMNVFLIISHGIMVLESIYFYPRFKISMLSLFISMIWVFNNDYVDYILKKYPYYDFIQQHVNLVAFIALWLSIISLMLYYNFNKLIKVKLFDKKIDSQ . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 246458 247075 . + 0 GCA_005502385.1_00775 GCA_005502385.1_00775_gene,GCA_005502385.1_00775_mRNA GCA_005502385.1_00775 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPTLRQLWELSLYQRSILVILLICNVLGTIYGFIWYGDQLLKTQWHYLIFVPDSPIASLFLCISICLIILNKQNSIIEGLAFVTLFKYGLWAVIMNFIMIINNDDITIMNVFLIISHGIMVLESIYFYPRFKISMLSLFISMIWVFNNDYVDYILKKYPYYDFIQQHVNLVAFIALWLSIISLMLYYNFNKLIKVKLFDKKIDSQ persistent 205 DUF1405 domain-containing protein WP_017176299.1 UPI00031F22DE UniRef100_A0A8X8GQW7,UniRef50_A0A654APD5,UniRef90_A0A3S7GS72 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 247103 247801 . + . GCA_005502385.1_00776_gene GCA_005502385.1_00776 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSIVSYIIYIVIIMLIPMWAQHKVKSNYEKYSQVRSTSGKTGREVAEEILHANGIYDVDVVKGEGFLTDHYDPNKKVVCLSPANFDRPSVAGTAIAAHEVGHAIQHQQGYAFLRFRTALVPLANIGSSLSYIVIMAGIFLTALGSAFGSTALWIGAGLMSLAVLFSIVTLPVEFDASSRAMKQITALNIVNEKEYKHARKVLSAAAMTYVAATATAVAELVRIILLARANDN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 247103 247801 . + . GCA_005502385.1_00776_mRNA GCA_005502385.1_00776 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSIVSYIIYIVIIMLIPMWAQHKVKSNYEKYSQVRSTSGKTGREVAEEILHANGIYDVDVVKGEGFLTDHYDPNKKVVCLSPANFDRPSVAGTAIAAHEVGHAIQHQQGYAFLRFRTALVPLANIGSSLSYIVIMAGIFLTALGSAFGSTALWIGAGLMSLAVLFSIVTLPVEFDASSRAMKQITALNIVNEKEYKHARKVLSAAAMTYVAATATAVAELVRIILLARANDN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 247103 247801 . + 0 GCA_005502385.1_00776 GCA_005502385.1_00776_gene,GCA_005502385.1_00776_mRNA GCA_005502385.1_00776 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSIVSYIIYIVIIMLIPMWAQHKVKSNYEKYSQVRSTSGKTGREVAEEILHANGIYDVDVVKGEGFLTDHYDPNKKVVCLSPANFDRPSVAGTAIAAHEVGHAIQHQQGYAFLRFRTALVPLANIGSSLSYIVIMAGIFLTALGSAFGSTALWIGAGLMSLAVLFSIVTLPVEFDASSRAMKQITALNIVNEKEYKHARKVLSAAAMTYVAATATAVAELVRIILLARANDN persistent 232 yugP Zinc metallopeptidase COG2738,O WP_017176300.1 UPI0003178904 UniRef100_A0A4V2KXC9,UniRef50_A0A7U7PY90,UniRef90_Q4L6G4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 248002 248319 . + . GCA_005502385.1_00777_gene GCA_005502385.1_00777 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKSLNQMQKEVDDYISQFKAGYFSPLANLARLTEEVGELAREINHYYGEKQKKPTEEENSVKAELGDNLFVLLCIANSLGIDMTESFNDTMEKFNTRDKNRFERK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 248002 248319 . + . GCA_005502385.1_00777_mRNA GCA_005502385.1_00777 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKSLNQMQKEVDDYISQFKAGYFSPLANLARLTEEVGELAREINHYYGEKQKKPTEEENSVKAELGDNLFVLLCIANSLGIDMTESFNDTMEKFNTRDKNRFERK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 248002 248319 . + 0 GCA_005502385.1_00777 GCA_005502385.1_00777_gene,GCA_005502385.1_00777_mRNA GCA_005502385.1_00777 putative protein YpjD GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKSLNQMQKEVDDYISQFKAGYFSPLANLARLTEEVGELAREINHYYGEKQKKPTEEENSVKAELGDNLFVLLCIANSLGIDMTESFNDTMEKFNTRDKNRFERK persistent 105 Nucleotide pyrophosphohydrolase WP_017176301.1 UPI0003106158 UniRef100_A0A4Q9WS25,UniRef50_B9EC53,UniRef90_A0A657ZS06 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 248342 249460 . + . GCA_005502385.1_00778_gene GCA_005502385.1_00778 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIGITCYPSMGGSGIIATELGIKMAERGHEVHFITSNIPFRIRKPLPNITIHQVEVNQYAVFQYPPYDITLSTKISEVIKEYDLDILHMHYAVPHAVCGILARQMAGKDIKIMTTLHGTDITVLGYDHSLKGAIKFGIEQSDLVTSVSQSLAKQTQSIIETDKEIIPIYNFVREKEFPTQHENQYKELYDIKPEEKVLIHVSNFRKVKRIDTILETFAKVHKHIPSKLILLGDGPELLDMRKIARSLHIEDDVLFLGKQAQVSKFYQMADLVLLLSEKESFGLTLLEAMTTGVVPIGSNAGGIKEVIKHGETGYIVDVGDSEQASDYALKLLTDEQLYQRLQSNMLKDIKQRFSSELIVDQYEYYYKKMLN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 248342 249460 . + . GCA_005502385.1_00778_mRNA GCA_005502385.1_00778 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIGITCYPSMGGSGIIATELGIKMAERGHEVHFITSNIPFRIRKPLPNITIHQVEVNQYAVFQYPPYDITLSTKISEVIKEYDLDILHMHYAVPHAVCGILARQMAGKDIKIMTTLHGTDITVLGYDHSLKGAIKFGIEQSDLVTSVSQSLAKQTQSIIETDKEIIPIYNFVREKEFPTQHENQYKELYDIKPEEKVLIHVSNFRKVKRIDTILETFAKVHKHIPSKLILLGDGPELLDMRKIARSLHIEDDVLFLGKQAQVSKFYQMADLVLLLSEKESFGLTLLEAMTTGVVPIGSNAGGIKEVIKHGETGYIVDVGDSEQASDYALKLLTDEQLYQRLQSNMLKDIKQRFSSELIVDQYEYYYKKMLN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 248342 249460 . + 0 GCA_005502385.1_00778 GCA_005502385.1_00778_gene,GCA_005502385.1_00778_mRNA GCA_005502385.1_00778 N-acetyl-alpha-D-glucosaminyl L-malate synthase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIGITCYPSMGGSGIIATELGIKMAERGHEVHFITSNIPFRIRKPLPNITIHQVEVNQYAVFQYPPYDITLSTKISEVIKEYDLDILHMHYAVPHAVCGILARQMAGKDIKIMTTLHGTDITVLGYDHSLKGAIKFGIEQSDLVTSVSQSLAKQTQSIIETDKEIIPIYNFVREKEFPTQHENQYKELYDIKPEEKVLIHVSNFRKVKRIDTILETFAKVHKHIPSKLILLGDGPELLDMRKIARSLHIEDDVLFLGKQAQVSKFYQMADLVLLLSEKESFGLTLLEAMTTGVVPIGSNAGGIKEVIKHGETGYIVDVGDSEQASDYALKLLTDEQLYQRLQSNMLKDIKQRFSSELIVDQYEYYYKKMLN persistent 372 bshA N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA GO:0016757,GO:0071793 WP_017176302.1 UPI0002EF7C51 UniRef100_A0A8X8GM92,UniRef50_P42982,UniRef90_A0A8X8GM92 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 249476 250678 . + . GCA_005502385.1_00779_gene GCA_005502385.1_00779 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGNELFEKALPILNQIETHHFEAYFVGGAVRDYIMHRTIHDIDITTSAMPDEIEDIFEHTIPIGKEHGTINVVFNNENYEVTTFRSEGDYLDHRRPSEVHFVRNLYEDVQRRDFTINAIAMDKNYKIFDYFGGQKDIQSKLIRTVGNPSERFKEDALRIIRGLRFQSQLTFDIHTETFEAMQLTCSDIEYLSIERIVVEFKKLILGSNVKQSYHNLLSLKLFNHIPFFNELDMTCVYINEPLEFEQWLAILLIKNDTLPSLKQLKISNKEKSDIHTYIDIIETLPQITSKDALKLFVYDYSDYYILKVLNIYSVLQNNQIPTASELIINSLSIKQVVQHLQLHERKEMDVNGKDLLDHFNKNGGPWLKNVLREIECAIVTDKIKNNKEEILKWVNENVKI . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 249476 250678 . + . GCA_005502385.1_00779_mRNA GCA_005502385.1_00779 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGNELFEKALPILNQIETHHFEAYFVGGAVRDYIMHRTIHDIDITTSAMPDEIEDIFEHTIPIGKEHGTINVVFNNENYEVTTFRSEGDYLDHRRPSEVHFVRNLYEDVQRRDFTINAIAMDKNYKIFDYFGGQKDIQSKLIRTVGNPSERFKEDALRIIRGLRFQSQLTFDIHTETFEAMQLTCSDIEYLSIERIVVEFKKLILGSNVKQSYHNLLSLKLFNHIPFFNELDMTCVYINEPLEFEQWLAILLIKNDTLPSLKQLKISNKEKSDIHTYIDIIETLPQITSKDALKLFVYDYSDYYILKVLNIYSVLQNNQIPTASELIINSLSIKQVVQHLQLHERKEMDVNGKDLLDHFNKNGGPWLKNVLREIECAIVTDKIKNNKEEILKWVNENVKI . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 249476 250678 . + 0 GCA_005502385.1_00779 GCA_005502385.1_00779_gene,GCA_005502385.1_00779_mRNA GCA_005502385.1_00779 CCA-adding enzyme GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGNELFEKALPILNQIETHHFEAYFVGGAVRDYIMHRTIHDIDITTSAMPDEIEDIFEHTIPIGKEHGTINVVFNNENYEVTTFRSEGDYLDHRRPSEVHFVRNLYEDVQRRDFTINAIAMDKNYKIFDYFGGQKDIQSKLIRTVGNPSERFKEDALRIIRGLRFQSQLTFDIHTETFEAMQLTCSDIEYLSIERIVVEFKKLILGSNVKQSYHNLLSLKLFNHIPFFNELDMTCVYINEPLEFEQWLAILLIKNDTLPSLKQLKISNKEKSDIHTYIDIIETLPQITSKDALKLFVYDYSDYYILKVLNIYSVLQNNQIPTASELIINSLSIKQVVQHLQLHERKEMDVNGKDLLDHFNKNGGPWLKNVLREIECAIVTDKIKNNKEEILKWVNENVKI persistent 400 CCA tRNA nucleotidyltransferase 2.7.7.72 GO:0001680,GO:0016779 WP_017176303.1 UPI0002EA3444 UniRef100_A0A8X8GJI0,UniRef50_Q49XR3,UniRef90_A0AAE5MZM8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 250665 251636 . + . GCA_005502385.1_00780_gene GCA_005502385.1_00780 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKYSQDVVKMLYDHQSEYISGQYIANQLNISRAAVKKVIDQLKADGCDIDSINHKGHKLNASPNRWYRGIINKVLESNHLVSKIEVYDSVESTQTIAKQSLVDNQYTMLILSDEQTKGRGRFNRNWSSSKGKGLWMSVVLRPNVSFAMIPKFNLFIALGIRDAIQAFSKDKVEIKWPNDIYINDKKVCGFLTEMVANADAVEAIICGIGINLNHQEEDFSDIIRHRATSIRLHNSEEINRYQFLKRLIEEIEKRYHQFLNSSFETIRDEYIRTSNIWHRKLTFTESGEQFIGEAIDIDNDGFLIVKDEDNQMRRLISADIDI . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 250665 251636 . + . GCA_005502385.1_00780_mRNA GCA_005502385.1_00780 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKYSQDVVKMLYDHQSEYISGQYIANQLNISRAAVKKVIDQLKADGCDIDSINHKGHKLNASPNRWYRGIINKVLESNHLVSKIEVYDSVESTQTIAKQSLVDNQYTMLILSDEQTKGRGRFNRNWSSSKGKGLWMSVVLRPNVSFAMIPKFNLFIALGIRDAIQAFSKDKVEIKWPNDIYINDKKVCGFLTEMVANADAVEAIICGIGINLNHQEEDFSDIIRHRATSIRLHNSEEINRYQFLKRLIEEIEKRYHQFLNSSFETIRDEYIRTSNIWHRKLTFTESGEQFIGEAIDIDNDGFLIVKDEDNQMRRLISADIDI . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 250665 251636 . + 0 GCA_005502385.1_00780 GCA_005502385.1_00780_gene,GCA_005502385.1_00780_mRNA GCA_005502385.1_00780 Bifunctional ligase/repressor BirA GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKYSQDVVKMLYDHQSEYISGQYIANQLNISRAAVKKVIDQLKADGCDIDSINHKGHKLNASPNRWYRGIINKVLESNHLVSKIEVYDSVESTQTIAKQSLVDNQYTMLILSDEQTKGRGRFNRNWSSSKGKGLWMSVVLRPNVSFAMIPKFNLFIALGIRDAIQAFSKDKVEIKWPNDIYINDKKVCGFLTEMVANADAVEAIICGIGINLNHQEEDFSDIIRHRATSIRLHNSEEINRYQFLKRLIEEIEKRYHQFLNSSFETIRDEYIRTSNIWHRKLTFTESGEQFIGEAIDIDNDGFLIVKDEDNQMRRLISADIDI persistent 323 birA Bifunctional ligase/repressor BirA 6.3.4.15 WP_017176304.1 UPI0003148521 UniRef100_A0A8X8GLP9,UniRef50_A0A2K4AIL1,UniRef90_A0AAE5MZP7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 251666 254374 . + . GCA_005502385.1_00781_gene GCA_005502385.1_00781 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAYTSFAVVDLETTGNQLEHDEIIQIGITFVRDNKISGTYHSMIRTDLEIPPFIQALTSIEETMLEQAPYFYEIADDIYEQLKDCIFVAHNVDFDLNFIKKAFEKSNIHFKPKKVLDTLELFKIAFPTEKSYQLSELANAHNIPLTNAHRADEDATTTAYLMIKAFKKFESLPIDTLKQLYYLSKHLKYDLFNILFEMVRQHHNHDIDYQYAQFEQIIYKKQQDLKVPQIEFKGSLKDLYLEVTTALELTYRPQQLYLSEIILEQLMHNDKALIEAPLGSGKSLAYLLAALMYNIETGKHVMISTNTKLLQHQLLQKDIPSINRALDFKINAALIKSKTDYISLGLISQILKDDTANYEVNILKMQLLIWILETNTGDIQELNLKGGQKMYFDQKLETYVPVRHDIHYYNYIKRNAQNIQIGITNHAHLIHSDQENSIYQLFDDCIIDEAHRLPDYALNQVTNELNYSDIKYQLGLIGKNENEKLLKLVDHLEQQRILERLDIPPIDVFGLKSNISDLHELNETLFNHIFDIVQHSDVHDDDVHRYHYVFDFDATRILKDLHAIVDKINKTLEFFNGINHKTIKSIRKQLLYINDNYRYIELSLKQNHTAFISIKNLNQKSTIRLIVKDYEVRDILTKQVLEKFKSLTFISGTLTFNHSFEAFKNWFKEDVEFNTYEVQSSLQNHKSTNIYIPSDVVSYDFKNTEDYVASIVDYIQEYVTVTQSKCLVLFTSYRMMHMVQELLNELPIFDDYVILTQQQNQNYKIVQQFNHFDKAILLGTSTFFEGFDYQSNGIKCVMIAKLPFMNKYNTKHWLMDSEFESTFKDYVLPDAVTRFRQGLGRLIRNEDDKGLIVSFDDRLTNSNYKHFFEQSLESYSQKKGNIQQFSKLLHRMQASKLKNRKK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 251666 254374 . + . GCA_005502385.1_00781_mRNA GCA_005502385.1_00781 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAYTSFAVVDLETTGNQLEHDEIIQIGITFVRDNKISGTYHSMIRTDLEIPPFIQALTSIEETMLEQAPYFYEIADDIYEQLKDCIFVAHNVDFDLNFIKKAFEKSNIHFKPKKVLDTLELFKIAFPTEKSYQLSELANAHNIPLTNAHRADEDATTTAYLMIKAFKKFESLPIDTLKQLYYLSKHLKYDLFNILFEMVRQHHNHDIDYQYAQFEQIIYKKQQDLKVPQIEFKGSLKDLYLEVTTALELTYRPQQLYLSEIILEQLMHNDKALIEAPLGSGKSLAYLLAALMYNIETGKHVMISTNTKLLQHQLLQKDIPSINRALDFKINAALIKSKTDYISLGLISQILKDDTANYEVNILKMQLLIWILETNTGDIQELNLKGGQKMYFDQKLETYVPVRHDIHYYNYIKRNAQNIQIGITNHAHLIHSDQENSIYQLFDDCIIDEAHRLPDYALNQVTNELNYSDIKYQLGLIGKNENEKLLKLVDHLEQQRILERLDIPPIDVFGLKSNISDLHELNETLFNHIFDIVQHSDVHDDDVHRYHYVFDFDATRILKDLHAIVDKINKTLEFFNGINHKTIKSIRKQLLYINDNYRYIELSLKQNHTAFISIKNLNQKSTIRLIVKDYEVRDILTKQVLEKFKSLTFISGTLTFNHSFEAFKNWFKEDVEFNTYEVQSSLQNHKSTNIYIPSDVVSYDFKNTEDYVASIVDYIQEYVTVTQSKCLVLFTSYRMMHMVQELLNELPIFDDYVILTQQQNQNYKIVQQFNHFDKAILLGTSTFFEGFDYQSNGIKCVMIAKLPFMNKYNTKHWLMDSEFESTFKDYVLPDAVTRFRQGLGRLIRNEDDKGLIVSFDDRLTNSNYKHFFEQSLESYSQKKGNIQQFSKLLHRMQASKLKNRKK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 251666 254374 . + 0 GCA_005502385.1_00781 GCA_005502385.1_00781_gene,GCA_005502385.1_00781_mRNA GCA_005502385.1_00781 3'-5' exonuclease DinG GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAYTSFAVVDLETTGNQLEHDEIIQIGITFVRDNKISGTYHSMIRTDLEIPPFIQALTSIEETMLEQAPYFYEIADDIYEQLKDCIFVAHNVDFDLNFIKKAFEKSNIHFKPKKVLDTLELFKIAFPTEKSYQLSELANAHNIPLTNAHRADEDATTTAYLMIKAFKKFESLPIDTLKQLYYLSKHLKYDLFNILFEMVRQHHNHDIDYQYAQFEQIIYKKQQDLKVPQIEFKGSLKDLYLEVTTALELTYRPQQLYLSEIILEQLMHNDKALIEAPLGSGKSLAYLLAALMYNIETGKHVMISTNTKLLQHQLLQKDIPSINRALDFKINAALIKSKTDYISLGLISQILKDDTANYEVNILKMQLLIWILETNTGDIQELNLKGGQKMYFDQKLETYVPVRHDIHYYNYIKRNAQNIQIGITNHAHLIHSDQENSIYQLFDDCIIDEAHRLPDYALNQVTNELNYSDIKYQLGLIGKNENEKLLKLVDHLEQQRILERLDIPPIDVFGLKSNISDLHELNETLFNHIFDIVQHSDVHDDDVHRYHYVFDFDATRILKDLHAIVDKINKTLEFFNGINHKTIKSIRKQLLYINDNYRYIELSLKQNHTAFISIKNLNQKSTIRLIVKDYEVRDILTKQVLEKFKSLTFISGTLTFNHSFEAFKNWFKEDVEFNTYEVQSSLQNHKSTNIYIPSDVVSYDFKNTEDYVASIVDYIQEYVTVTQSKCLVLFTSYRMMHMVQELLNELPIFDDYVILTQQQNQNYKIVQQFNHFDKAILLGTSTFFEGFDYQSNGIKCVMIAKLPFMNKYNTKHWLMDSEFESTFKDYVLPDAVTRFRQGLGRLIRNEDDKGLIVSFDDRLTNSNYKHFFEQSLESYSQKKGNIQQFSKLLHRMQASKLKNRKK persistent 902 dinG 3'-5' exonuclease DinG 5.6.2.3 WP_070436444.1 UPI0008A475AD UniRef100_UPI0008A475AD,UniRef50_Q6GGV4,UniRef90_A0A3S7GSL1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 254481 255773 . + . GCA_005502385.1_00782_gene GCA_005502385.1_00782 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKTTIKQAKQYINQEVTIGAWLTNKRSSGKIAFLQLRDGSGFMQGVVVKSEVDEETFKLAKDITQESSLYVTGTITEDNRSDLGYEMQVKSIEVIHEAHDYPITPKNHGTEFLMDHRHLWLRSKKQHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDQDAFLSQSGQLYMEAAAMAHGRVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHEESLQVQEQYVSHIVKSVLEHCKLELKALDRDTSKLEKVSAPFPRISYDDAIKFLKEEGFDDIEWGEDFGAPHETAIANHYDLPVFITNYPTKIKPFYMQPNPDNEDTVLCADLIAPEGYGEIIGGSERINDLELLEQRIDEHQLDTESYNYYLDLRRYGSVPHSGFGLGLERTVAWISGVEHVRETSPFPRLLNRLYP . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 254481 255773 . + . GCA_005502385.1_00782_mRNA GCA_005502385.1_00782 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKTTIKQAKQYINQEVTIGAWLTNKRSSGKIAFLQLRDGSGFMQGVVVKSEVDEETFKLAKDITQESSLYVTGTITEDNRSDLGYEMQVKSIEVIHEAHDYPITPKNHGTEFLMDHRHLWLRSKKQHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDQDAFLSQSGQLYMEAAAMAHGRVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHEESLQVQEQYVSHIVKSVLEHCKLELKALDRDTSKLEKVSAPFPRISYDDAIKFLKEEGFDDIEWGEDFGAPHETAIANHYDLPVFITNYPTKIKPFYMQPNPDNEDTVLCADLIAPEGYGEIIGGSERINDLELLEQRIDEHQLDTESYNYYLDLRRYGSVPHSGFGLGLERTVAWISGVEHVRETSPFPRLLNRLYP . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 254481 255773 . + 0 GCA_005502385.1_00782 GCA_005502385.1_00782_gene,GCA_005502385.1_00782_mRNA GCA_005502385.1_00782 Asparagine--tRNA ligase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKTTIKQAKQYINQEVTIGAWLTNKRSSGKIAFLQLRDGSGFMQGVVVKSEVDEETFKLAKDITQESSLYVTGTITEDNRSDLGYEMQVKSIEVIHEAHDYPITPKNHGTEFLMDHRHLWLRSKKQHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDQDAFLSQSGQLYMEAAAMAHGRVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHEESLQVQEQYVSHIVKSVLEHCKLELKALDRDTSKLEKVSAPFPRISYDDAIKFLKEEGFDDIEWGEDFGAPHETAIANHYDLPVFITNYPTKIKPFYMQPNPDNEDTVLCADLIAPEGYGEIIGGSERINDLELLEQRIDEHQLDTESYNYYLDLRRYGSVPHSGFGLGLERTVAWISGVEHVRETSPFPRLLNRLYP persistent 430 asnS asparagine--tRNA ligase 6.1.1.22 GO:0003676,GO:0004816,GO:0005524,GO:0005737,GO:0006421,GO:0016740 COG0017,J WP_048682152.1 UPI0006612066 UniRef100_UPI0006612066,UniRef50_P54262,UniRef90_Q2FYH6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 255871 256557 . + . GCA_005502385.1_00783_gene GCA_005502385.1_00783 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDTHQLKTRPVVVRRELFDHYNELGLNEKDLVILIKLIYAAEVSNKQPSIEFLQKGSNMEPREITSIIQNLIQRDLLALHVSKDEEGKFTEYMNLNRFYEKLSDILTQEKNETTHHQTQQNFKDLFQYIEQLFSRPLSPYEIETLNQWIDIDQHDYTLIRAALDEAYSHDKLSFKYVDRILLNWKKNNVTTLEESNKVREKFNKPKLTHTVKHIPKFDWLNGENLDGK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 255871 256557 . + . GCA_005502385.1_00783_mRNA GCA_005502385.1_00783 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDTHQLKTRPVVVRRELFDHYNELGLNEKDLVILIKLIYAAEVSNKQPSIEFLQKGSNMEPREITSIIQNLIQRDLLALHVSKDEEGKFTEYMNLNRFYEKLSDILTQEKNETTHHQTQQNFKDLFQYIEQLFSRPLSPYEIETLNQWIDIDQHDYTLIRAALDEAYSHDKLSFKYVDRILLNWKKNNVTTLEESNKVREKFNKPKLTHTVKHIPKFDWLNGENLDGK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 255871 256557 . + 0 GCA_005502385.1_00783 GCA_005502385.1_00783_gene,GCA_005502385.1_00783_mRNA GCA_005502385.1_00783 DNA replication protein DnaD GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MDTHQLKTRPVVVRRELFDHYNELGLNEKDLVILIKLIYAAEVSNKQPSIEFLQKGSNMEPREITSIIQNLIQRDLLALHVSKDEEGKFTEYMNLNRFYEKLSDILTQEKNETTHHQTQQNFKDLFQYIEQLFSRPLSPYEIETLNQWIDIDQHDYTLIRAALDEAYSHDKLSFKYVDRILLNWKKNNVTTLEESNKVREKFNKPKLTHTVKHIPKFDWLNGENLDGK persistent 228 dnaD DnaD domain protein WP_048762449.1 UPI000660EDCA UniRef100_UPI000660EDCA,UniRef50_A0A2T4RL44,UniRef90_A0A657ZSE0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 256547 257206 . + . GCA_005502385.1_00784_gene GCA_005502385.1_00784 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVSKKKALEMIDVIADMFPDAECELKHDNPFELTIAVLLSAQCTDNLVNKVTRSLFKKYKTPEDYLKVDIEELQNDIKSIGLYRNKAKNIKKLCQSLLDQYDGQVPHTHKDLESLAGVGRKTANVVMSVAFDEPSLAVDTHVERVSKRLGINKWKDNVKQVEERLCDIIPKERWSKSHHQLIFFGRYHCIARKPKCDICPLLEDCREGQKRMKAMKKEV . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 256547 257206 . + . GCA_005502385.1_00784_mRNA GCA_005502385.1_00784 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVSKKKALEMIDVIADMFPDAECELKHDNPFELTIAVLLSAQCTDNLVNKVTRSLFKKYKTPEDYLKVDIEELQNDIKSIGLYRNKAKNIKKLCQSLLDQYDGQVPHTHKDLESLAGVGRKTANVVMSVAFDEPSLAVDTHVERVSKRLGINKWKDNVKQVEERLCDIIPKERWSKSHHQLIFFGRYHCIARKPKCDICPLLEDCREGQKRMKAMKKEV . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 256547 257206 . + 0 GCA_005502385.1_00784 GCA_005502385.1_00784_gene,GCA_005502385.1_00784_mRNA GCA_005502385.1_00784 Endonuclease III GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVSKKKALEMIDVIADMFPDAECELKHDNPFELTIAVLLSAQCTDNLVNKVTRSLFKKYKTPEDYLKVDIEELQNDIKSIGLYRNKAKNIKKLCQSLLDQYDGQVPHTHKDLESLAGVGRKTANVVMSVAFDEPSLAVDTHVERVSKRLGINKWKDNVKQVEERLCDIIPKERWSKSHHQLIFFGRYHCIARKPKCDICPLLEDCREGQKRMKAMKKEV persistent 219 nth endonuclease III 4.2.99.18 GO:0006281,GO:0140078 WP_048678915.1 UPI000660CCCA UniRef100_UPI00265C4629,UniRef50_A0A7X2ZB98,UniRef90_A0AAE5JP19 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 257211 257546 . + . GCA_005502385.1_00785_gene GCA_005502385.1_00785 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MINKSQFESLENELDVYAKKRQLNSDLAKQYIDDYFELLLLFFRQINEIESIDLNQLDQYPVVPMNFLERYQYMLKRKYHFMGYSQMKTLKNELIKMNASYQIRRKNQNNN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 257211 257546 . + . GCA_005502385.1_00785_mRNA GCA_005502385.1_00785 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MINKSQFESLENELDVYAKKRQLNSDLAKQYIDDYFELLLLFFRQINEIESIDLNQLDQYPVVPMNFLERYQYMLKRKYHFMGYSQMKTLKNELIKMNASYQIRRKNQNNN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 257211 257546 . + 0 GCA_005502385.1_00785 GCA_005502385.1_00785_gene,GCA_005502385.1_00785_mRNA GCA_005502385.1_00785 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MINKSQFESLENELDVYAKKRQLNSDLAKQYIDDYFELLLLFFRQINEIESIDLNQLDQYPVVPMNFLERYQYMLKRKYHFMGYSQMKTLKNELIKMNASYQIRRKNQNNN persistent 111 YpoC-like domain-containing protein WP_048762447.1 UPI000660E18D UniRef100_UPI000660E18D,UniRef50_A0A143PAF6,UniRef90_A0A657M4H5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 257640 260024 . - . GCA_005502385.1_00786_gene GCA_005502385.1_00786 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTENKGFSQPNKGKNGKSKSKKNKNVKRTIIKIIGFLFIAFIVLLLLGILLFAYYAWKAPAFNESKLQDPKPAEIYDKNGDLVKKLDNGARREHVDLKDVPKNMKNAVLATEDNRFYEHGALDYKRLFGAIGKNVTGGFGSQGASTLTQQVVKRSFLSEKKSIGRKAQEAYLSYRLEQEYSKDDIFQMYLNKIYYSDGVYGVRAAAKYYFNKNLNELNLAEEAYLAGLPQVPNLYNIYDNPKEAENRKETVLYLMHYHHRISDKQWKEAKATSLEDNLVKRTTKERQISNNDSDTEYDSYVNFVKAELIGNKHFKNKNYSDLMQSGIKIYTNMDKDVQKTLQDRIDNGNYYKNDDQQVGSTILDSKTGGIVAISGGRNYKDVVDRNAATDTHLTGSSLKPFLSYGPAIENMQWATNHAIQDESSYSIDGGTFRNYDSQGHGTVSAYDALRQSFNIPALKAWQQVSSSAGKDAPKEFASKVGLDYDIDLGPSEILGGGASEFSPTQLASAFASIANGGTYNNAHSIRKVVTSDDETIEFDHTSHKAMEDYTAYMLAEMLTGTFKPYGSAYGHGVAGVNMGAKTGTSTYGTEVNNQYNLPDNAAKDIWMNGFTPKYTMSIWMGFSQIKQGGEDSFLGHSEQEYAQYLYKDVMSDITSSNDGDFKKPDSVVGSGASTLSVKDHPDNNTTSGSKYDNMSTNNSDSSSSSNSSSTGNSSSNSNSTSDNNSNTTSTTNSNTTTNTGNTTDNSVNNSTTNNSANNSTTSTQQNNNNDNTNNNSSLSNIFKANTIFNFRKAS . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 257640 260024 . - . GCA_005502385.1_00786_mRNA GCA_005502385.1_00786 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTENKGFSQPNKGKNGKSKSKKNKNVKRTIIKIIGFLFIAFIVLLLLGILLFAYYAWKAPAFNESKLQDPKPAEIYDKNGDLVKKLDNGARREHVDLKDVPKNMKNAVLATEDNRFYEHGALDYKRLFGAIGKNVTGGFGSQGASTLTQQVVKRSFLSEKKSIGRKAQEAYLSYRLEQEYSKDDIFQMYLNKIYYSDGVYGVRAAAKYYFNKNLNELNLAEEAYLAGLPQVPNLYNIYDNPKEAENRKETVLYLMHYHHRISDKQWKEAKATSLEDNLVKRTTKERQISNNDSDTEYDSYVNFVKAELIGNKHFKNKNYSDLMQSGIKIYTNMDKDVQKTLQDRIDNGNYYKNDDQQVGSTILDSKTGGIVAISGGRNYKDVVDRNAATDTHLTGSSLKPFLSYGPAIENMQWATNHAIQDESSYSIDGGTFRNYDSQGHGTVSAYDALRQSFNIPALKAWQQVSSSAGKDAPKEFASKVGLDYDIDLGPSEILGGGASEFSPTQLASAFASIANGGTYNNAHSIRKVVTSDDETIEFDHTSHKAMEDYTAYMLAEMLTGTFKPYGSAYGHGVAGVNMGAKTGTSTYGTEVNNQYNLPDNAAKDIWMNGFTPKYTMSIWMGFSQIKQGGEDSFLGHSEQEYAQYLYKDVMSDITSSNDGDFKKPDSVVGSGASTLSVKDHPDNNTTSGSKYDNMSTNNSDSSSSSNSSSTGNSSSNSNSTSDNNSNTTSTTNSNTTTNTGNTTDNSVNNSTTNNSANNSTTSTQQNNNNDNTNNNSSLSNIFKANTIFNFRKAS . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 257640 260024 . - 0 GCA_005502385.1_00786 GCA_005502385.1_00786_gene,GCA_005502385.1_00786_mRNA GCA_005502385.1_00786 Penicillin-binding protein 1A/1B GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTENKGFSQPNKGKNGKSKSKKNKNVKRTIIKIIGFLFIAFIVLLLLGILLFAYYAWKAPAFNESKLQDPKPAEIYDKNGDLVKKLDNGARREHVDLKDVPKNMKNAVLATEDNRFYEHGALDYKRLFGAIGKNVTGGFGSQGASTLTQQVVKRSFLSEKKSIGRKAQEAYLSYRLEQEYSKDDIFQMYLNKIYYSDGVYGVRAAAKYYFNKNLNELNLAEEAYLAGLPQVPNLYNIYDNPKEAENRKETVLYLMHYHHRISDKQWKEAKATSLEDNLVKRTTKERQISNNDSDTEYDSYVNFVKAELIGNKHFKNKNYSDLMQSGIKIYTNMDKDVQKTLQDRIDNGNYYKNDDQQVGSTILDSKTGGIVAISGGRNYKDVVDRNAATDTHLTGSSLKPFLSYGPAIENMQWATNHAIQDESSYSIDGGTFRNYDSQGHGTVSAYDALRQSFNIPALKAWQQVSSSAGKDAPKEFASKVGLDYDIDLGPSEILGGGASEFSPTQLASAFASIANGGTYNNAHSIRKVVTSDDETIEFDHTSHKAMEDYTAYMLAEMLTGTFKPYGSAYGHGVAGVNMGAKTGTSTYGTEVNNQYNLPDNAAKDIWMNGFTPKYTMSIWMGFSQIKQGGEDSFLGHSEQEYAQYLYKDVMSDITSSNDGDFKKPDSVVGSGASTLSVKDHPDNNTTSGSKYDNMSTNNSDSSSSSNSSSTGNSSSNSNSTSDNNSNTTSTTNSNTTTNTGNTTDNSVNNSTTNNSANNSTTSTQQNNNNDNTNNNSSLSNIFKANTIFNFRKAS persistent 794 peptidoglycan glycosyltransferase UniRef50_F4NA87,UniRef90_A0A3S7GW20 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 260021 260650 . - . GCA_005502385.1_00787_gene GCA_005502385.1_00787 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MINYPNGKPFKLNPTKVGSNQSDASSNIKYGGRGMTLEKDIEQSNNYYFKHGVAVIHKKPTPIQIVNVHYPKRSKAVINEAYFRTPSTTDYNGVYRGYYIDFEAKETKNKTSFPLNNIHDHQVEHMKSCFLQKGLVFLLIRFKMLDEVYLLPFSKFEPFWERYKKEIKKSITVEEIKKNSYYIPYQYQPRLNYLKAVDKLILDESEDRV . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 260021 260650 . - . GCA_005502385.1_00787_mRNA GCA_005502385.1_00787 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MINYPNGKPFKLNPTKVGSNQSDASSNIKYGGRGMTLEKDIEQSNNYYFKHGVAVIHKKPTPIQIVNVHYPKRSKAVINEAYFRTPSTTDYNGVYRGYYIDFEAKETKNKTSFPLNNIHDHQVEHMKSCFLQKGLVFLLIRFKMLDEVYLLPFSKFEPFWERYKKEIKKSITVEEIKKNSYYIPYQYQPRLNYLKAVDKLILDESEDRV . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 260021 260650 . - 0 GCA_005502385.1_00787 GCA_005502385.1_00787_gene,GCA_005502385.1_00787_mRNA GCA_005502385.1_00787 Holliday junction resolvase RecU GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MINYPNGKPFKLNPTKVGSNQSDASSNIKYGGRGMTLEKDIEQSNNYYFKHGVAVIHKKPTPIQIVNVHYPKRSKAVINEAYFRTPSTTDYNGVYRGYYIDFEAKETKNKTSFPLNNIHDHQVEHMKSCFLQKGLVFLLIRFKMLDEVYLLPFSKFEPFWERYKKEIKKSITVEEIKKNSYYIPYQYQPRLNYLKAVDKLILDESEDRV persistent 209 recU Holliday junction resolvase RecU 3.1.21.10 UniRef50_Q5HP94,UniRef90_A0A533ISU0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 260909 261262 . + . GCA_005502385.1_00788_gene GCA_005502385.1_00788 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYTLINEILKELQYMASSYNEIKLTQSEKQFHRDVVPYVKKIDGLTEELSHYHDELIQFPYMNKEKLEILVKHIKELSVECHYNKTSKKLFNEKLKSANYDLTNLLKHIKDKEESIH . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 260909 261262 . + . GCA_005502385.1_00788_mRNA GCA_005502385.1_00788 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYTLINEILKELQYMASSYNEIKLTQSEKQFHRDVVPYVKKIDGLTEELSHYHDELIQFPYMNKEKLEILVKHIKELSVECHYNKTSKKLFNEKLKSANYDLTNLLKHIKDKEESIH . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 260909 261262 . + 0 GCA_005502385.1_00788 GCA_005502385.1_00788_gene,GCA_005502385.1_00788_mRNA GCA_005502385.1_00788 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYTLINEILKELQYMASSYNEIKLTQSEKQFHRDVVPYVKKIDGLTEELSHYHDELIQFPYMNKEKLEILVKHIKELSVECHYNKTSKKLFNEKLKSANYDLTNLLKHIKDKEESIH persistent 117 DUF1798 domain-containing protein WP_017176309.1 UPI0002F8BE21 UniRef100_A0A4Q9WS34,UniRef50_A0AAE5JPG6,UniRef90_A0AAE5JPG6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 261259 261822 . + . GCA_005502385.1_00789_gene GCA_005502385.1_00789 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKTVYVTGYKSFELNIFKDDMKEVDYLKQFIEHKLLQYIDEGLEWVLIQGQIGIELWAAEVVLKLQDTYPELKLGIITPFYGHTSKWNEHNIAKYESIASNAQFLESVFHSEYQGPFQFKQTDQFILDHTDMTLLIYDDEQEGSPKYFKRMLVDFMEKTTYNCDIVTFDELTDFINDLQWQQDQSFE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 261259 261822 . + . GCA_005502385.1_00789_mRNA GCA_005502385.1_00789 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKTVYVTGYKSFELNIFKDDMKEVDYLKQFIEHKLLQYIDEGLEWVLIQGQIGIELWAAEVVLKLQDTYPELKLGIITPFYGHTSKWNEHNIAKYESIASNAQFLESVFHSEYQGPFQFKQTDQFILDHTDMTLLIYDDEQEGSPKYFKRMLVDFMEKTTYNCDIVTFDELTDFINDLQWQQDQSFE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 261259 261822 . + 0 GCA_005502385.1_00789 GCA_005502385.1_00789_gene,GCA_005502385.1_00789_mRNA GCA_005502385.1_00789 hypothetical protein UPF0398 protein YpsA GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKTVYVTGYKSFELNIFKDDMKEVDYLKQFIEHKLLQYIDEGLEWVLIQGQIGIELWAAEVVLKLQDTYPELKLGIITPFYGHTSKWNEHNIAKYESIASNAQFLESVFHSEYQGPFQFKQTDQFILDHTDMTLLIYDDEQEGSPKYFKRMLVDFMEKTTYNCDIVTFDELTDFINDLQWQQDQSFE persistent 187 UPF0398 protein FOB69_10380 WP_017176310.1 UPI0002E8A716 UniRef100_A0A8I1BFB6,UniRef50_Q2FYI4,UniRef90_A0A6N0I436 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 261834 262172 . + . GCA_005502385.1_00790_gene GCA_005502385.1_00790 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MADVSLKLSAKDIYEKDFEKTMARGYRREEVDAFLDDIITDYQKMADMNNEVVRLSEENNKLKKEVEELRIRVATSRPSDNKSFASSNSKSANNNVDILKRISNLEKAVFGK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 261834 262172 . + . GCA_005502385.1_00790_mRNA GCA_005502385.1_00790 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MADVSLKLSAKDIYEKDFEKTMARGYRREEVDAFLDDIITDYQKMADMNNEVVRLSEENNKLKKEVEELRIRVATSRPSDNKSFASSNSKSANNNVDILKRISNLEKAVFGK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 261834 262172 . + 0 GCA_005502385.1_00790 GCA_005502385.1_00790_gene,GCA_005502385.1_00790_mRNA GCA_005502385.1_00790 Cell cycle protein GpsB GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MADVSLKLSAKDIYEKDFEKTMARGYRREEVDAFLDDIITDYQKMADMNNEVVRLSEENNKLKKEVEELRIRVATSRPSDNKSFASSNSKSANNNVDILKRISNLEKAVFGK persistent 112 gpsB cell division regulator GpsB GO:0005737,GO:0008360,GO:0051301 COG3599,D WP_002449866.1 UPI00019FA51C UniRef100_A0A1L8Y7M0,UniRef50_Q2FYI5,UniRef90_Q5HP97 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 262309 262695 . + . GCA_005502385.1_00791_gene GCA_005502385.1_00791 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 262309 262695 . + . GCA_005502385.1_00791_mRNA GCA_005502385.1_00791 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 Infernal:001001 misc_RNA 262309 262695 298.9 + . GCA_005502385.1_00791 GCA_005502385.1_00791_gene,GCA_005502385.1_00791_mRNA GCA_005502385.1_00791 RNaseP_bact_b GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 262813 263949 . + . GCA_005502385.1_00792_gene GCA_005502385.1_00792 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYQLLAVCPMGLEAVVAKEIQELGYNTQVENGRIFFEGDANAIVKCNLWLRTADRLKIVVGRFNAKTFDELFEKTKALPWETIIDKEGQFPVQGRSVKSTLHSVPDCQAITKKAIVERLKKAYNEKGWLNESGAKYPVEVAILKDNVLLTIDTSGSGLNRRGYRIAQGEAPIKETLAASLVRLANWKGDTPFIDPFCGSGTIAIEACLIAQNIAPGFNREFVSEEWNIMPPNIYDVMRDEADQQADYDKDIQVYASDIDPEMVEIAKRNAEEVGLGDIIQFSVKDVNTLTIDQEGPVALVGNPPYGERIGGRAEVEEMYRYVGKLMKQHPYLSTYILTSNKEFEYLVDRKATKRRKLFNGYIECTYYQYWGKKPNIDK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 262813 263949 . + . GCA_005502385.1_00792_mRNA GCA_005502385.1_00792 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYQLLAVCPMGLEAVVAKEIQELGYNTQVENGRIFFEGDANAIVKCNLWLRTADRLKIVVGRFNAKTFDELFEKTKALPWETIIDKEGQFPVQGRSVKSTLHSVPDCQAITKKAIVERLKKAYNEKGWLNESGAKYPVEVAILKDNVLLTIDTSGSGLNRRGYRIAQGEAPIKETLAASLVRLANWKGDTPFIDPFCGSGTIAIEACLIAQNIAPGFNREFVSEEWNIMPPNIYDVMRDEADQQADYDKDIQVYASDIDPEMVEIAKRNAEEVGLGDIIQFSVKDVNTLTIDQEGPVALVGNPPYGERIGGRAEVEEMYRYVGKLMKQHPYLSTYILTSNKEFEYLVDRKATKRRKLFNGYIECTYYQYWGKKPNIDK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 262813 263949 . + 0 GCA_005502385.1_00792 GCA_005502385.1_00792_gene,GCA_005502385.1_00792_mRNA GCA_005502385.1_00792 Ribosomal RNA large subunit methyltransferase L GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYQLLAVCPMGLEAVVAKEIQELGYNTQVENGRIFFEGDANAIVKCNLWLRTADRLKIVVGRFNAKTFDELFEKTKALPWETIIDKEGQFPVQGRSVKSTLHSVPDCQAITKKAIVERLKKAYNEKGWLNESGAKYPVEVAILKDNVLLTIDTSGSGLNRRGYRIAQGEAPIKETLAASLVRLANWKGDTPFIDPFCGSGTIAIEACLIAQNIAPGFNREFVSEEWNIMPPNIYDVMRDEADQQADYDKDIQVYASDIDPEMVEIAKRNAEEVGLGDIIQFSVKDVNTLTIDQEGPVALVGNPPYGERIGGRAEVEEMYRYVGKLMKQHPYLSTYILTSNKEFEYLVDRKATKRRKLFNGYIECTYYQYWGKKPNIDK persistent 378 rlmL THUMP domain-containing protein COG0116,J WP_017176312.1 UPI0003038916 UniRef100_A0A4Q9WS62,UniRef50_P50840,UniRef90_Q4L6E9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 264128 264766 . + . GCA_005502385.1_00793_gene GCA_005502385.1_00793 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQTVLIVGANGKVSIEATKIFLENSSFNVDLFLRNAHRIPDYASNRITVFEGDAKNVEDLEKALDQVDIVFASLSGSLDREAQAIIDAMNKKNVKRLIFVAAPGIYDELPDKFNTFNKEQFGEKLTKYRKAADLIEASDLDYTIIRPAWLTFKNESDYEITQKGDTFKGTEVSRRSVANLAVRIAKQPELYSRQNIGVNKPNTDGDKPAWFN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 264128 264766 . + . GCA_005502385.1_00793_mRNA GCA_005502385.1_00793 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQTVLIVGANGKVSIEATKIFLENSSFNVDLFLRNAHRIPDYASNRITVFEGDAKNVEDLEKALDQVDIVFASLSGSLDREAQAIIDAMNKKNVKRLIFVAAPGIYDELPDKFNTFNKEQFGEKLTKYRKAADLIEASDLDYTIIRPAWLTFKNESDYEITQKGDTFKGTEVSRRSVANLAVRIAKQPELYSRQNIGVNKPNTDGDKPAWFN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 264128 264766 . + 0 GCA_005502385.1_00793 GCA_005502385.1_00793_gene,GCA_005502385.1_00793_mRNA GCA_005502385.1_00793 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQTVLIVGANGKVSIEATKIFLENSSFNVDLFLRNAHRIPDYASNRITVFEGDAKNVEDLEKALDQVDIVFASLSGSLDREAQAIIDAMNKKNVKRLIFVAAPGIYDELPDKFNTFNKEQFGEKLTKYRKAADLIEASDLDYTIIRPAWLTFKNESDYEITQKGDTFKGTEVSRRSVANLAVRIAKQPELYSRQNIGVNKPNTDGDKPAWFN persistent 212 NAD-dependent dehydratase WP_002455331.1 UPI0001EF5416 UniRef100_A0A4Q9X0L8,UniRef50_A0A7U7JRP4,UniRef90_A0A4Q9X0L8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 264930 268373 . + . GCA_005502385.1_00794_gene GCA_005502385.1_00794 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQNNEQLDVLYKLKKEIEKSNNEALVHTINQVIKKVYLNQYTLSFVGHFSAGKSTLINLLLEQDILPSSPVPTTSNTAIVSVSKEEEIIANLEYQKYAKLKTYDDVKIMNRLNIDVESIEIKFPSNKFNLGFTLQDTPGVDSNVSTHQSTTEQFLYTSNMIVYIVDYNHVQSALNFQFMKRMNQVGIPIIFVINQIDKHNENEISFDTFKQKVEQSIQDWDIKVAQLFYVSKFDHPNNQLHLFSEFLVEQDKLREPIEDFVTRIIEFIHRTQLSYIQEHMQNILDALNINESEFEESYKQFQQNQAISEEAQLLNHSSQLLTYLKEKRKNILDNAYIMTHDMREDIRYYLESMALDFKVGGLLNKKKKTEEERAKRLQIVVDRLQEKVNRHIRQPMREDLSFVTRFIHHSEVNQRILNQHYEIEPTLISNLYQVQTSINNTYVLTFSDDVLKAIARAIEKQSDSLFKDIIEHTEATELSNIEDNDAHLYEQYLEFKNLKQSLTTENYKHYYIHINDSLDKLIDRTETHYKLNQSTISSTNDLDEDITSTKDTTTHHFDIQKALAIIEPVPLFNKTKQDIKATLQRIDNKIVKIGVFGTFSAGKSSLINALLGDHYLVSSPNPTTAATTEISYGHDSQITLKTNTQLLNELNQLLEYQNVSFNSLEKFMNSNIESLKQQLEKNQLAFITSVEKHFSMYQDMLTEGITHTISQNEIKQWSAEDEYATFVKTVHIQLPLDWLKDKIIVDSLGLHSNNQRHTNETERILTSSDLILYVSYFNHSFTDNDKAFIEHMKDINQLNEAQTFKMIINAIDLAETNEDLIAVEQYVKDALSQVNLPSELFGVSSKRALETKDEGILKLKESINHFVETESKTILEKQMIHQIEQMRDNFNQIIYEFKTNQTRMLEQQQQLETYKNKTPLTNQIIHTSEQHTKNEVEEQIYHLNKRLQLQLLDEVKKVYNSQMTQNNDFNDEKKRATKMYLDQVHQRLYLEQTLLVERIKTYFTSQLDQQIAPTIQKLNSVHVLIQPHFKITAPFTDDALLRISLEEMLSVLPKQLSKRKILNANAQRELQEMICTNTLELLQPSLNVLKQQLNYYVSNLTHDANIELNQLNNNVLEQINDLLSKRIDNSLIEQLETVNQQLEPLLN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 264930 268373 . + . GCA_005502385.1_00794_mRNA GCA_005502385.1_00794 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQNNEQLDVLYKLKKEIEKSNNEALVHTINQVIKKVYLNQYTLSFVGHFSAGKSTLINLLLEQDILPSSPVPTTSNTAIVSVSKEEEIIANLEYQKYAKLKTYDDVKIMNRLNIDVESIEIKFPSNKFNLGFTLQDTPGVDSNVSTHQSTTEQFLYTSNMIVYIVDYNHVQSALNFQFMKRMNQVGIPIIFVINQIDKHNENEISFDTFKQKVEQSIQDWDIKVAQLFYVSKFDHPNNQLHLFSEFLVEQDKLREPIEDFVTRIIEFIHRTQLSYIQEHMQNILDALNINESEFEESYKQFQQNQAISEEAQLLNHSSQLLTYLKEKRKNILDNAYIMTHDMREDIRYYLESMALDFKVGGLLNKKKKTEEERAKRLQIVVDRLQEKVNRHIRQPMREDLSFVTRFIHHSEVNQRILNQHYEIEPTLISNLYQVQTSINNTYVLTFSDDVLKAIARAIEKQSDSLFKDIIEHTEATELSNIEDNDAHLYEQYLEFKNLKQSLTTENYKHYYIHINDSLDKLIDRTETHYKLNQSTISSTNDLDEDITSTKDTTTHHFDIQKALAIIEPVPLFNKTKQDIKATLQRIDNKIVKIGVFGTFSAGKSSLINALLGDHYLVSSPNPTTAATTEISYGHDSQITLKTNTQLLNELNQLLEYQNVSFNSLEKFMNSNIESLKQQLEKNQLAFITSVEKHFSMYQDMLTEGITHTISQNEIKQWSAEDEYATFVKTVHIQLPLDWLKDKIIVDSLGLHSNNQRHTNETERILTSSDLILYVSYFNHSFTDNDKAFIEHMKDINQLNEAQTFKMIINAIDLAETNEDLIAVEQYVKDALSQVNLPSELFGVSSKRALETKDEGILKLKESINHFVETESKTILEKQMIHQIEQMRDNFNQIIYEFKTNQTRMLEQQQQLETYKNKTPLTNQIIHTSEQHTKNEVEEQIYHLNKRLQLQLLDEVKKVYNSQMTQNNDFNDEKKRATKMYLDQVHQRLYLEQTLLVERIKTYFTSQLDQQIAPTIQKLNSVHVLIQPHFKITAPFTDDALLRISLEEMLSVLPKQLSKRKILNANAQRELQEMICTNTLELLQPSLNVLKQQLNYYVSNLTHDANIELNQLNNNVLEQINDLLSKRIDNSLIEQLETVNQQLEPLLN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 264930 268373 . + 0 GCA_005502385.1_00794 GCA_005502385.1_00794_gene,GCA_005502385.1_00794_mRNA GCA_005502385.1_00794 GTPase Der GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQNNEQLDVLYKLKKEIEKSNNEALVHTINQVIKKVYLNQYTLSFVGHFSAGKSTLINLLLEQDILPSSPVPTTSNTAIVSVSKEEEIIANLEYQKYAKLKTYDDVKIMNRLNIDVESIEIKFPSNKFNLGFTLQDTPGVDSNVSTHQSTTEQFLYTSNMIVYIVDYNHVQSALNFQFMKRMNQVGIPIIFVINQIDKHNENEISFDTFKQKVEQSIQDWDIKVAQLFYVSKFDHPNNQLHLFSEFLVEQDKLREPIEDFVTRIIEFIHRTQLSYIQEHMQNILDALNINESEFEESYKQFQQNQAISEEAQLLNHSSQLLTYLKEKRKNILDNAYIMTHDMREDIRYYLESMALDFKVGGLLNKKKKTEEERAKRLQIVVDRLQEKVNRHIRQPMREDLSFVTRFIHHSEVNQRILNQHYEIEPTLISNLYQVQTSINNTYVLTFSDDVLKAIARAIEKQSDSLFKDIIEHTEATELSNIEDNDAHLYEQYLEFKNLKQSLTTENYKHYYIHINDSLDKLIDRTETHYKLNQSTISSTNDLDEDITSTKDTTTHHFDIQKALAIIEPVPLFNKTKQDIKATLQRIDNKIVKIGVFGTFSAGKSSLINALLGDHYLVSSPNPTTAATTEISYGHDSQITLKTNTQLLNELNQLLEYQNVSFNSLEKFMNSNIESLKQQLEKNQLAFITSVEKHFSMYQDMLTEGITHTISQNEIKQWSAEDEYATFVKTVHIQLPLDWLKDKIIVDSLGLHSNNQRHTNETERILTSSDLILYVSYFNHSFTDNDKAFIEHMKDINQLNEAQTFKMIINAIDLAETNEDLIAVEQYVKDALSQVNLPSELFGVSSKRALETKDEGILKLKESINHFVETESKTILEKQMIHQIEQMRDNFNQIIYEFKTNQTRMLEQQQQLETYKNKTPLTNQIIHTSEQHTKNEVEEQIYHLNKRLQLQLLDEVKKVYNSQMTQNNDFNDEKKRATKMYLDQVHQRLYLEQTLLVERIKTYFTSQLDQQIAPTIQKLNSVHVLIQPHFKITAPFTDDALLRISLEEMLSVLPKQLSKRKILNANAQRELQEMICTNTLELLQPSLNVLKQQLNYYVSNLTHDANIELNQLNNNVLEQINDLLSKRIDNSLIEQLETVNQQLEPLLN persistent 1147 Dynamin family protein WP_049415971.1 UPI00066E46C9 UniRef100_UPI00374FC6BB,UniRef50_K9B117,UniRef90_A0A8X8GMA2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 268388 269272 . + . GCA_005502385.1_00795_gene GCA_005502385.1_00795 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTQRVLLVDGMALLFRHFYATSLHNQFMYNSKGMPTNGIQGFVRHIFTAIKDIKPSHVAICWDMGQATFRNAMYTSYKQNRPAPPEELIPQFDYVKDISEQFGFVNIGVANYEADDVIGTLAKIYSKDNEVHIVTGDRDILQCINEQVEVWLIRKGFNIYHHYTLNRFNEEYALHPLQLIDIKAFMGDSADGYPGVKGIGEKTAIKLIQSYGSVENVLDHIESLTPGQQKKIATDKENLILSKQLAEIYTDVPIDTTALYKEMEYTHSLNHILSICNEHELYVSGKYLASKILM . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 268388 269272 . + . GCA_005502385.1_00795_mRNA GCA_005502385.1_00795 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTQRVLLVDGMALLFRHFYATSLHNQFMYNSKGMPTNGIQGFVRHIFTAIKDIKPSHVAICWDMGQATFRNAMYTSYKQNRPAPPEELIPQFDYVKDISEQFGFVNIGVANYEADDVIGTLAKIYSKDNEVHIVTGDRDILQCINEQVEVWLIRKGFNIYHHYTLNRFNEEYALHPLQLIDIKAFMGDSADGYPGVKGIGEKTAIKLIQSYGSVENVLDHIESLTPGQQKKIATDKENLILSKQLAEIYTDVPIDTTALYKEMEYTHSLNHILSICNEHELYVSGKYLASKILM . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 268388 269272 . + 0 GCA_005502385.1_00795 GCA_005502385.1_00795_gene,GCA_005502385.1_00795_mRNA GCA_005502385.1_00795 5'-3' exonuclease GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTQRVLLVDGMALLFRHFYATSLHNQFMYNSKGMPTNGIQGFVRHIFTAIKDIKPSHVAICWDMGQATFRNAMYTSYKQNRPAPPEELIPQFDYVKDISEQFGFVNIGVANYEADDVIGTLAKIYSKDNEVHIVTGDRDILQCINEQVEVWLIRKGFNIYHHYTLNRFNEEYALHPLQLIDIKAFMGDSADGYPGVKGIGEKTAIKLIQSYGSVENVLDHIESLTPGQQKKIATDKENLILSKQLAEIYTDVPIDTTALYKEMEYTHSLNHILSICNEHELYVSGKYLASKILM persistent 294 5'-3' exonuclease WP_048762443.1 UPI0006615625 UniRef100_UPI0006615625,UniRef50_A0A380G7N4,UniRef90_A0A3S7GWV3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 269336 269737 . - . GCA_005502385.1_00796_gene GCA_005502385.1_00796 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKIFFDAATSGNPGRSTCGIVIKENDIKYTYTHDLGELDNHSAEWSAFIHALEHARELNVSNALLHTDSKLIEDSVNQGYVKNARFKPFFENMEILEASFDLLFVKWVPRDKNKEANQLAQQALYKLIKNKQ . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 269336 269737 . - . GCA_005502385.1_00796_mRNA GCA_005502385.1_00796 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKIFFDAATSGNPGRSTCGIVIKENDIKYTYTHDLGELDNHSAEWSAFIHALEHARELNVSNALLHTDSKLIEDSVNQGYVKNARFKPFFENMEILEASFDLLFVKWVPRDKNKEANQLAQQALYKLIKNKQ . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 269336 269737 . - 0 GCA_005502385.1_00796 GCA_005502385.1_00796_gene,GCA_005502385.1_00796_mRNA GCA_005502385.1_00796 14.7 kDa ribonuclease H-like protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKIFFDAATSGNPGRSTCGIVIKENDIKYTYTHDLGELDNHSAEWSAFIHALEHARELNVSNALLHTDSKLIEDSVNQGYVKNARFKPFFENMEILEASFDLLFVKWVPRDKNKEANQLAQQALYKLIKNKQ persistent 133 Ribonuclease H WP_002449811.1 UPI00019FA517 UniRef100_A0A1L8Y7P0,UniRef50_Q2FYJ7,UniRef90_A0A1L8Y7P0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 269837 270544 . - . GCA_005502385.1_00797_gene GCA_005502385.1_00797 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMYNEFFGIATFFVTFIVMVLMYRCFGKQGLIAWVAIGTIIANIQVIKTVDIFGISATLGNVMFASIYLATDILNDIYGRKVAKRAVWLGFSSTLVMIIVMQMSLHFIPAPEDISQKALSTIFDLVPRIALGSIIAYIIGQHVDVFIFSMIKKVFQSDKTFIIRAYGSTVLSSIIDTALFVTIAFIGTLPASVVFEIFITTYVLKLVSTIFNVPFGYIAKSFYRKGKIQKLDEGY . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 269837 270544 . - . GCA_005502385.1_00797_mRNA GCA_005502385.1_00797 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMYNEFFGIATFFVTFIVMVLMYRCFGKQGLIAWVAIGTIIANIQVIKTVDIFGISATLGNVMFASIYLATDILNDIYGRKVAKRAVWLGFSSTLVMIIVMQMSLHFIPAPEDISQKALSTIFDLVPRIALGSIIAYIIGQHVDVFIFSMIKKVFQSDKTFIIRAYGSTVLSSIIDTALFVTIAFIGTLPASVVFEIFITTYVLKLVSTIFNVPFGYIAKSFYRKGKIQKLDEGY . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 269837 270544 . - 0 GCA_005502385.1_00797 GCA_005502385.1_00797_gene,GCA_005502385.1_00797_mRNA GCA_005502385.1_00797 queuosine precursor transporter GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMYNEFFGIATFFVTFIVMVLMYRCFGKQGLIAWVAIGTIIANIQVIKTVDIFGISATLGNVMFASIYLATDILNDIYGRKVAKRAVWLGFSSTLVMIIVMQMSLHFIPAPEDISQKALSTIFDLVPRIALGSIIAYIIGQHVDVFIFSMIKKVFQSDKTFIIRAYGSTVLSSIIDTALFVTIAFIGTLPASVVFEIFITTYVLKLVSTIFNVPFGYIAKSFYRKGKIQKLDEGY persistent 235 queuosine precursor transporter GO:1990397 UniRef50_A0A380CFB3,UniRef90_A0A974KZ76 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 270947 271195 . + . GCA_005502385.1_00798_gene GCA_005502385.1_00798 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MHIKSIEDTPNYNTIKINLSEKRKDNQSNTYTSAQDGQPDFINRLFDIEGVKSVFYVMDFISVDKEEYANWDDLVPKIEDTF . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 270947 271195 . + . GCA_005502385.1_00798_mRNA GCA_005502385.1_00798 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MHIKSIEDTPNYNTIKINLSEKRKDNQSNTYTSAQDGQPDFINRLFDIEGVKSVFYVMDFISVDKEEYANWDDLVPKIEDTF . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 270947 271195 . + 0 GCA_005502385.1_00798 GCA_005502385.1_00798_gene,GCA_005502385.1_00798_mRNA GCA_005502385.1_00798 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MHIKSIEDTPNYNTIKINLSEKRKDNQSNTYTSAQDGQPDFINRLFDIEGVKSVFYVMDFISVDKEEYANWDDLVPKIEDTF persistent 82 nifU NifU N-terminal domain-containing protein WP_002449746.1 UPI00019FA514 UniRef100_A0A1L8Y7L2,UniRef50_Q5HPA6,UniRef90_A0A1L8Y7L2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 271213 272328 . + . GCA_005502385.1_00799_gene GCA_005502385.1_00799 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEILKIEPTPSPNTMKIVLSEKRADNQSNTYTEVKTSQPDFINDLLQIKDVKSIFHVIDFLAIDKYPKANWEEVLPQITASLQKEETISQSSQFDEHYGEVKAEILTFKNIPYQIKLTNAHEEVRKQLPDIFINSMLKAQEDDDNVIFLRKWKELGLRYGELSLVMEEVYEEIIALYPKSRLEQLVVQALSTQTKNTSHFYQHVSYEEYLNESDWKVRLRMLTEFPTPTLEDIPLLEQALNENKLPLRRQAIVLFGMIESKEILPYLYKGLNDQHPAIRRTAGDCISDLGYKEALPEMEKALDDPQKIVRWRAAMFLFEEGGEAQLASLRAHANDNAYEVKLQVKMAISRIENGDEALGSVWKQIANRNKH . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 271213 272328 . + . GCA_005502385.1_00799_mRNA GCA_005502385.1_00799 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEILKIEPTPSPNTMKIVLSEKRADNQSNTYTEVKTSQPDFINDLLQIKDVKSIFHVIDFLAIDKYPKANWEEVLPQITASLQKEETISQSSQFDEHYGEVKAEILTFKNIPYQIKLTNAHEEVRKQLPDIFINSMLKAQEDDDNVIFLRKWKELGLRYGELSLVMEEVYEEIIALYPKSRLEQLVVQALSTQTKNTSHFYQHVSYEEYLNESDWKVRLRMLTEFPTPTLEDIPLLEQALNENKLPLRRQAIVLFGMIESKEILPYLYKGLNDQHPAIRRTAGDCISDLGYKEALPEMEKALDDPQKIVRWRAAMFLFEEGGEAQLASLRAHANDNAYEVKLQVKMAISRIENGDEALGSVWKQIANRNKH . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 271213 272328 . + 0 GCA_005502385.1_00799 GCA_005502385.1_00799_gene,GCA_005502385.1_00799_mRNA GCA_005502385.1_00799 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEILKIEPTPSPNTMKIVLSEKRADNQSNTYTEVKTSQPDFINDLLQIKDVKSIFHVIDFLAIDKYPKANWEEVLPQITASLQKEETISQSSQFDEHYGEVKAEILTFKNIPYQIKLTNAHEEVRKQLPDIFINSMLKAQEDDDNVIFLRKWKELGLRYGELSLVMEEVYEEIIALYPKSRLEQLVVQALSTQTKNTSHFYQHVSYEEYLNESDWKVRLRMLTEFPTPTLEDIPLLEQALNENKLPLRRQAIVLFGMIESKEILPYLYKGLNDQHPAIRRTAGDCISDLGYKEALPEMEKALDDPQKIVRWRAAMFLFEEGGEAQLASLRAHANDNAYEVKLQVKMAISRIENGDEALGSVWKQIANRNKH persistent 371 Conserved virulence factor C WP_137689484.1 UPI0010F4C340 UniRef100_UPI0010F4C340,UniRef50_Q49XP0,UniRef90_A0A3S7GSP5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 272342 272776 . + . GCA_005502385.1_00800_gene GCA_005502385.1_00800 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNPYEQYMHELAQQMRSELTDNGFTSLESSEDVSNYMNNVKDDETTFVVINSTCGCAAGLARPAAVAVADQNDKKPTHKVTVFAGQDKEATQTMRDYIQQVPSSPSYALFKGTELKHFIPREHIEGRDIQDICMDIKDAFDENC . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 272342 272776 . + . GCA_005502385.1_00800_mRNA GCA_005502385.1_00800 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNPYEQYMHELAQQMRSELTDNGFTSLESSEDVSNYMNNVKDDETTFVVINSTCGCAAGLARPAAVAVADQNDKKPTHKVTVFAGQDKEATQTMRDYIQQVPSSPSYALFKGTELKHFIPREHIEGRDIQDICMDIKDAFDENC . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 272342 272776 . + 0 GCA_005502385.1_00800 GCA_005502385.1_00800_gene,GCA_005502385.1_00800_mRNA GCA_005502385.1_00800 hypothetical protein UPF0403 protein SA1261 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNPYEQYMHELAQQMRSELTDNGFTSLESSEDVSNYMNNVKDDETTFVVINSTCGCAAGLARPAAVAVADQNDKKPTHKVTVFAGQDKEATQTMRDYIQQVPSSPSYALFKGTELKHFIPREHIEGRDIQDICMDIKDAFDENC persistent 144 BrxA/BrxB family bacilliredoxin WP_017176317.1 UPI0002EF90B1 UniRef100_A0A2A1MGY7,UniRef50_Q2FYK4,UniRef90_A0AAE5JMR1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 272958 273914 . + . GCA_005502385.1_00801_gene GCA_005502385.1_00801 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLNPFDSAYHDLCNDILEIGNQRDDRTHTGTISKFGHQIRFDLTKGFPLLTTKKISFKLIATELLWFIKGDTNIQYLLKYNNNIWNEWAFEKYIQSEDYHGPDMTNFGHRSQEDENFNKMYQQEMKKFKEKVLNDDTFAKKYGDLGNVYGKQWRDWVDQYGNHFDQLKTVIQQIKTNPNSRRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECNLEVGEFIHTFGDAHIYSNHIEAIKTQLSREGFAPPTLKINSEHSIFDINYEDLELVDYQSHPAIKAPIAV . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 272958 273914 . + . GCA_005502385.1_00801_mRNA GCA_005502385.1_00801 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLNPFDSAYHDLCNDILEIGNQRDDRTHTGTISKFGHQIRFDLTKGFPLLTTKKISFKLIATELLWFIKGDTNIQYLLKYNNNIWNEWAFEKYIQSEDYHGPDMTNFGHRSQEDENFNKMYQQEMKKFKEKVLNDDTFAKKYGDLGNVYGKQWRDWVDQYGNHFDQLKTVIQQIKTNPNSRRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECNLEVGEFIHTFGDAHIYSNHIEAIKTQLSREGFAPPTLKINSEHSIFDINYEDLELVDYQSHPAIKAPIAV . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 272958 273914 . + 0 GCA_005502385.1_00801 GCA_005502385.1_00801_gene,GCA_005502385.1_00801_mRNA GCA_005502385.1_00801 Thymidylate synthase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLNPFDSAYHDLCNDILEIGNQRDDRTHTGTISKFGHQIRFDLTKGFPLLTTKKISFKLIATELLWFIKGDTNIQYLLKYNNNIWNEWAFEKYIQSEDYHGPDMTNFGHRSQEDENFNKMYQQEMKKFKEKVLNDDTFAKKYGDLGNVYGKQWRDWVDQYGNHFDQLKTVIQQIKTNPNSRRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECNLEVGEFIHTFGDAHIYSNHIEAIKTQLSREGFAPPTLKINSEHSIFDINYEDLELVDYQSHPAIKAPIAV persistent 318 thymidylate synthase 2.1.1.45 GO:0004799,GO:0006231 WP_017176318.1 UPI00030326DB UniRef100_A0A8X8KES7,UniRef50_P00469,UniRef90_A0A974QNE7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 273956 274432 . + . GCA_005502385.1_00802_gene GCA_005502385.1_00802 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTLSILVAHDQQRVIGYKNALPWHIPNDLKHVKQLSTGHTLVMGRKTFESIGKPLPNRKNVVLTRDNNFKPDGVEVIHTIDDIYNLEGHVFIFGGQTLFEVMIDKVDDMYITVVDGKHQGDTFFPPYTFEDWTVVSSEEGQLDGKNTIPHTFLHLVRK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 273956 274432 . + . GCA_005502385.1_00802_mRNA GCA_005502385.1_00802 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTLSILVAHDQQRVIGYKNALPWHIPNDLKHVKQLSTGHTLVMGRKTFESIGKPLPNRKNVVLTRDNNFKPDGVEVIHTIDDIYNLEGHVFIFGGQTLFEVMIDKVDDMYITVVDGKHQGDTFFPPYTFEDWTVVSSEEGQLDGKNTIPHTFLHLVRK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 273956 274432 . + 0 GCA_005502385.1_00802 GCA_005502385.1_00802_gene,GCA_005502385.1_00802_mRNA GCA_005502385.1_00802 Dihydrofolate reductase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTLSILVAHDQQRVIGYKNALPWHIPNDLKHVKQLSTGHTLVMGRKTFESIGKPLPNRKNVVLTRDNNFKPDGVEVIHTIDDIYNLEGHVFIFGGQTLFEVMIDKVDDMYITVVDGKHQGDTFFPPYTFEDWTVVSSEEGQLDGKNTIPHTFLHLVRK persistent 158 Dihydrofolate reductase 1.5.1.3 WP_048679885.1 UPI000660C4EF UniRef100_UPI000660C4EF,UniRef50_Q5HFZ7,UniRef90_A0A3S7GSN1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 274454 275299 . + . GCA_005502385.1_00803_gene GCA_005502385.1_00803 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTKQVIVTDSTSDLSAEYLNQHNIHVVPLNLTIDKESFVDQVDISSEEYIKRIEEDADVKTSQPSIGKFIELYEQLDKDNDDVEIFSIHMSSGLSGTYQTALQASNMIEAKVNVIDSKSISFGLAYQIQRLVELVNTNLSSAEIIKHISELQKNIKLFVVIGQLNQLIKGGRISKTKGLIGNIMKIKPIGTLREGYLEIVHNSRTQNSSIQYLKKEIAKFIENHTIQSIGIAHANTIEFIEKVKHQFNEAFGQQNYDVNVTTPVISTHTGQGAIGLVVVRG . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 274454 275299 . + . GCA_005502385.1_00803_mRNA GCA_005502385.1_00803 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTKQVIVTDSTSDLSAEYLNQHNIHVVPLNLTIDKESFVDQVDISSEEYIKRIEEDADVKTSQPSIGKFIELYEQLDKDNDDVEIFSIHMSSGLSGTYQTALQASNMIEAKVNVIDSKSISFGLAYQIQRLVELVNTNLSSAEIIKHISELQKNIKLFVVIGQLNQLIKGGRISKTKGLIGNIMKIKPIGTLREGYLEIVHNSRTQNSSIQYLKKEIAKFIENHTIQSIGIAHANTIEFIEKVKHQFNEAFGQQNYDVNVTTPVISTHTGQGAIGLVVVRG . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 274454 275299 . + 0 GCA_005502385.1_00803 GCA_005502385.1_00803_gene,GCA_005502385.1_00803_mRNA GCA_005502385.1_00803 DegV domain-containing protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTKQVIVTDSTSDLSAEYLNQHNIHVVPLNLTIDKESFVDQVDISSEEYIKRIEEDADVKTSQPSIGKFIELYEQLDKDNDDVEIFSIHMSSGLSGTYQTALQASNMIEAKVNVIDSKSISFGLAYQIQRLVELVNTNLSSAEIIKHISELQKNIKLFVVIGQLNQLIKGGRISKTKGLIGNIMKIKPIGTLREGYLEIVHNSRTQNSSIQYLKKEIAKFIENHTIQSIGIAHANTIEFIEKVKHQFNEAFGQQNYDVNVTTPVISTHTGQGAIGLVVVRG persistent 281 degV DegV family protein WP_017176320.1 UPI0002E5EFC3 UniRef100_A0A4Q9WTD5,UniRef50_Q8NWR0,UniRef90_A0A6N0I427 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 275401 275928 . + . GCA_005502385.1_00804_gene GCA_005502385.1_00804 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAYATLAGGCFWCMVKPFTSYPGIEDVVSGYSGGNIENPTYEQVCSNQTGHREAVQITYNPDITSFENILDVYFKLFDPTDNKGQFFDRGESYEPAIFYHDEQQKKAAELKIQQLNEEGIFKKPIITPVLPYKNFYPAEDYHQDYYKKNPMHYEQYQRGSGRKAFIESHWGSQND . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 275401 275928 . + . GCA_005502385.1_00804_mRNA GCA_005502385.1_00804 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAYATLAGGCFWCMVKPFTSYPGIEDVVSGYSGGNIENPTYEQVCSNQTGHREAVQITYNPDITSFENILDVYFKLFDPTDNKGQFFDRGESYEPAIFYHDEQQKKAAELKIQQLNEEGIFKKPIITPVLPYKNFYPAEDYHQDYYKKNPMHYEQYQRGSGRKAFIESHWGSQND . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 275401 275928 . + 0 GCA_005502385.1_00804 GCA_005502385.1_00804_gene,GCA_005502385.1_00804_mRNA GCA_005502385.1_00804 Peptide methionine sulfoxide reductase MsrA 2 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAYATLAGGCFWCMVKPFTSYPGIEDVVSGYSGGNIENPTYEQVCSNQTGHREAVQITYNPDITSFENILDVYFKLFDPTDNKGQFFDRGESYEPAIFYHDEQQKKAAELKIQQLNEEGIFKKPIITPVLPYKNFYPAEDYHQDYYKKNPMHYEQYQRGSGRKAFIESHWGSQND persistent 175 msrA Peptide methionine sulfoxide reductase MsrA COG0225,O WP_017176321.1 UPI0003068C66 UniRef100_A0A2A1MEQ7,UniRef50_P0A086,UniRef90_A0A2K0A826 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 275921 276349 . + . GCA_005502385.1_00805_gene GCA_005502385.1_00805 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIKKDKSELNDMEYLVTQENGTEPPFQNEYWNHFDKGIYVDKISGKPLFTSEEKFESDCGWPSFSKALDDDEIVELVDKSFGMIRTEVRSEDANSHLGHVFNDGPKESGGLRYCINSAAIQFIPYEKLEELGYGDLIQYFNK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 275921 276349 . + . GCA_005502385.1_00805_mRNA GCA_005502385.1_00805 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIKKDKSELNDMEYLVTQENGTEPPFQNEYWNHFDKGIYVDKISGKPLFTSEEKFESDCGWPSFSKALDDDEIVELVDKSFGMIRTEVRSEDANSHLGHVFNDGPKESGGLRYCINSAAIQFIPYEKLEELGYGDLIQYFNK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 275921 276349 . + 0 GCA_005502385.1_00805 GCA_005502385.1_00805_gene,GCA_005502385.1_00805_mRNA GCA_005502385.1_00805 Peptide methionine sulfoxide reductase MsrB GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIKKDKSELNDMEYLVTQENGTEPPFQNEYWNHFDKGIYVDKISGKPLFTSEEKFESDCGWPSFSKALDDDEIVELVDKSFGMIRTEVRSEDANSHLGHVFNDGPKESGGLRYCINSAAIQFIPYEKLEELGYGDLIQYFNK persistent 142 msrB Peptide methionine sulfoxide reductase MsrB 1.8.4.12 GO:0005737,GO:0006979,GO:0030091,GO:0033743 COG0229,O UniRef50_P0A088,UniRef90_Q4L6D3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 276362 276862 . + . GCA_005502385.1_00806_gene GCA_005502385.1_00806 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFKKLFGKDKEVNKETQLYAPLTGEYVKIEDIPDPVFAQKMMGEGFGINPTEGEVVSPVAGKVDNVFPTKHAIGLKTKNGLEILVHIGLDTVQLDGEGFNVLVSSGDTVQVGDPLLKFDLEFIRNNAKSVISPIIITNSDQTESISLDDVKAVIKGETKVVDVTMS . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 276362 276862 . + . GCA_005502385.1_00806_mRNA GCA_005502385.1_00806 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFKKLFGKDKEVNKETQLYAPLTGEYVKIEDIPDPVFAQKMMGEGFGINPTEGEVVSPVAGKVDNVFPTKHAIGLKTKNGLEILVHIGLDTVQLDGEGFNVLVSSGDTVQVGDPLLKFDLEFIRNNAKSVISPIIITNSDQTESISLDDVKAVIKGETKVVDVTMS . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 276362 276862 . + 0 GCA_005502385.1_00806 GCA_005502385.1_00806_gene,GCA_005502385.1_00806_mRNA GCA_005502385.1_00806 PTS system glucose-specific EIIA component GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFKKLFGKDKEVNKETQLYAPLTGEYVKIEDIPDPVFAQKMMGEGFGINPTEGEVVSPVAGKVDNVFPTKHAIGLKTKNGLEILVHIGLDTVQLDGEGFNVLVSSGDTVQVGDPLLKFDLEFIRNNAKSVISPIIITNSDQTESISLDDVKAVIKGETKVVDVTMS persistent 166 PTS system glucose-specific EIIA component WP_002449797.1 UPI00019FA50C UniRef100_A0A1L8Y7L8,UniRef50_Q81JY0,UniRef90_A0A1L8Y7L8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 276862 277083 . + . GCA_005502385.1_00807_gene GCA_005502385.1_00807 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKDHSFYQFALTARGRKDDKGELAEDIFNDLSFPKHESDFNVLSDYIEMQSDITLPMSVFDDLYEEYTEWLKF . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 276862 277083 . + . GCA_005502385.1_00807_mRNA GCA_005502385.1_00807 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKDHSFYQFALTARGRKDDKGELAEDIFNDLSFPKHESDFNVLSDYIEMQSDITLPMSVFDDLYEEYTEWLKF . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 276862 277083 . + 0 GCA_005502385.1_00807 GCA_005502385.1_00807_gene,GCA_005502385.1_00807_mRNA GCA_005502385.1_00807 hypothetical protein UPF0346 protein MW1311 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKDHSFYQFALTARGRKDDKGELAEDIFNDLSFPKHESDFNVLSDYIEMQSDITLPMSVFDDLYEEYTEWLKF persistent 73 UPF0346 protein J7T32_001465 WP_017176322.1 UPI0002E778DE UniRef100_A0A4V2KXD3,UniRef50_Q2FYL1,UniRef90_A0A4V2KXD3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 277285 278754 . + . GCA_005502385.1_00808_gene GCA_005502385.1_00808 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNNHSEEHHDGQSDEKRHASPKKKMHLKIWQFILILLSVIIITTIIAVFATIGISHKLSGLTKEERQEMKKIEFAYKTLDTDYYKKQNSSKLSEAAINGMVKELKDPYSEYMTKSETKSFNEDVSGDFVGIGAEMQKKNKDIMITSPMKDSPAEKAGLQPKDVVTKVNGKSVVGKPLDQVVKVVRGKEGTNVRLTIKRGSEEKDINIKRGKIHVKSVEYKKKGNIAVFTITKFQQNTAGELKSAIIKAHDAGVRNIILDLRNNPGGLLDEAVKMANIFIDKGQTVVQLEKGNDKEAIKTSNDALKDVKDMKVSILVNEGSASASEVFTGAMKDHHKAKVYGSKTFGKGIVQTTRELKDGSLLKYTQMKWLTPDDHYIHGKGIRPDVTIDSPKYQSLSVIPSDKTYSVGDNNKNVKSIKIGLDALGYYNGDESNQFDNQLANAIKLFQSDNQLSETGKFDTKTNEKFTQLLVEKSNKEDTVLDKLLKLIK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 277285 278754 . + . GCA_005502385.1_00808_mRNA GCA_005502385.1_00808 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNNHSEEHHDGQSDEKRHASPKKKMHLKIWQFILILLSVIIITTIIAVFATIGISHKLSGLTKEERQEMKKIEFAYKTLDTDYYKKQNSSKLSEAAINGMVKELKDPYSEYMTKSETKSFNEDVSGDFVGIGAEMQKKNKDIMITSPMKDSPAEKAGLQPKDVVTKVNGKSVVGKPLDQVVKVVRGKEGTNVRLTIKRGSEEKDINIKRGKIHVKSVEYKKKGNIAVFTITKFQQNTAGELKSAIIKAHDAGVRNIILDLRNNPGGLLDEAVKMANIFIDKGQTVVQLEKGNDKEAIKTSNDALKDVKDMKVSILVNEGSASASEVFTGAMKDHHKAKVYGSKTFGKGIVQTTRELKDGSLLKYTQMKWLTPDDHYIHGKGIRPDVTIDSPKYQSLSVIPSDKTYSVGDNNKNVKSIKIGLDALGYYNGDESNQFDNQLANAIKLFQSDNQLSETGKFDTKTNEKFTQLLVEKSNKEDTVLDKLLKLIK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 277285 278754 . + 0 GCA_005502385.1_00808 GCA_005502385.1_00808_gene,GCA_005502385.1_00808_mRNA GCA_005502385.1_00808 putative CtpA-like serine protease GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNNHSEEHHDGQSDEKRHASPKKKMHLKIWQFILILLSVIIITTIIAVFATIGISHKLSGLTKEERQEMKKIEFAYKTLDTDYYKKQNSSKLSEAAINGMVKELKDPYSEYMTKSETKSFNEDVSGDFVGIGAEMQKKNKDIMITSPMKDSPAEKAGLQPKDVVTKVNGKSVVGKPLDQVVKVVRGKEGTNVRLTIKRGSEEKDINIKRGKIHVKSVEYKKKGNIAVFTITKFQQNTAGELKSAIIKAHDAGVRNIILDLRNNPGGLLDEAVKMANIFIDKGQTVVQLEKGNDKEAIKTSNDALKDVKDMKVSILVNEGSASASEVFTGAMKDHHKAKVYGSKTFGKGIVQTTRELKDGSLLKYTQMKWLTPDDHYIHGKGIRPDVTIDSPKYQSLSVIPSDKTYSVGDNNKNVKSIKIGLDALGYYNGDESNQFDNQLANAIKLFQSDNQLSETGKFDTKTNEKFTQLLVEKSNKEDTVLDKLLKLIK persistent 489 putative CtpA-like serine protease WP_017176323.1 UPI000319B08A UniRef100_A0A4Q9WS50,UniRef50_Q4L6D0,UniRef90_A0A4Q9WS50 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 278772 279275 . + . GCA_005502385.1_00809_gene GCA_005502385.1_00809 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIRLGKHEDINQIETLVSEAKDLMKSFGNNQWDDKYPATEHFKEDIDTETLYVLEENNTIYGFIVVDQQQSEWYDDLEWPVDRNNAYVIHRLAGSKDYKGAATQLFDFAVKLAEEHHIHVILTDTFALNKPAQGLFEKFGFQKVGETEIDYHPFDRGAPFYAYYKNI . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 278772 279275 . + . GCA_005502385.1_00809_mRNA GCA_005502385.1_00809 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIRLGKHEDINQIETLVSEAKDLMKSFGNNQWDDKYPATEHFKEDIDTETLYVLEENNTIYGFIVVDQQQSEWYDDLEWPVDRNNAYVIHRLAGSKDYKGAATQLFDFAVKLAEEHHIHVILTDTFALNKPAQGLFEKFGFQKVGETEIDYHPFDRGAPFYAYYKNI . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 278772 279275 . + 0 GCA_005502385.1_00809 GCA_005502385.1_00809_gene,GCA_005502385.1_00809_mRNA GCA_005502385.1_00809 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIRLGKHEDINQIETLVSEAKDLMKSFGNNQWDDKYPATEHFKEDIDTETLYVLEENNTIYGFIVVDQQQSEWYDDLEWPVDRNNAYVIHRLAGSKDYKGAATQLFDFAVKLAEEHHIHVILTDTFALNKPAQGLFEKFGFQKVGETEIDYHPFDRGAPFYAYYKNI persistent 167 GNAT family N-acetyltransferase WP_019835253.1 UPI000365712C UniRef100_UPI000365712C,UniRef50_Q2FYL4,UniRef90_A0A6N0I426 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 279294 280361 . + . GCA_005502385.1_00810_gene GCA_005502385.1_00810 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKIAFTGGGTVGHVSVNLSLIPTALEKGHQVFYIGSKNGIEREMIESQLSNIKYYPISSGKLRRYLSFENAKDVFKVLKGILDARRVLKKEKPDLLFSKGGFVSVPVVIAARSLNIPTIIHESDLTPGLANKISLKFSKKIYTTFEDTLKYLPKDKADFVGATIREDLKEGNQQKGYEITGFDSDKKVLLVMGGSLGSKKLNDIIRENLEALLHDYQIIHLTGHGLVDESYKQKGYIQYEFVKEELTHLLSITDTVVSRAGSNAIYEFLTLRIPMLLIPLGLDQSRGDQIDNAKYFESKGYGKMIPEDQLTQFKLLEQLKQIESHRTDITHQMESYKESYTKEDLFNKILNDAL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 279294 280361 . + . GCA_005502385.1_00810_mRNA GCA_005502385.1_00810 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKIAFTGGGTVGHVSVNLSLIPTALEKGHQVFYIGSKNGIEREMIESQLSNIKYYPISSGKLRRYLSFENAKDVFKVLKGILDARRVLKKEKPDLLFSKGGFVSVPVVIAARSLNIPTIIHESDLTPGLANKISLKFSKKIYTTFEDTLKYLPKDKADFVGATIREDLKEGNQQKGYEITGFDSDKKVLLVMGGSLGSKKLNDIIRENLEALLHDYQIIHLTGHGLVDESYKQKGYIQYEFVKEELTHLLSITDTVVSRAGSNAIYEFLTLRIPMLLIPLGLDQSRGDQIDNAKYFESKGYGKMIPEDQLTQFKLLEQLKQIESHRTDITHQMESYKESYTKEDLFNKILNDAL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 279294 280361 . + 0 GCA_005502385.1_00810 GCA_005502385.1_00810_gene,GCA_005502385.1_00810_mRNA GCA_005502385.1_00810 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKIAFTGGGTVGHVSVNLSLIPTALEKGHQVFYIGSKNGIEREMIESQLSNIKYYPISSGKLRRYLSFENAKDVFKVLKGILDARRVLKKEKPDLLFSKGGFVSVPVVIAARSLNIPTIIHESDLTPGLANKISLKFSKKIYTTFEDTLKYLPKDKADFVGATIREDLKEGNQQKGYEITGFDSDKKVLLVMGGSLGSKKLNDIIRENLEALLHDYQIIHLTGHGLVDESYKQKGYIQYEFVKEELTHLLSITDTVVSRAGSNAIYEFLTLRIPMLLIPLGLDQSRGDQIDNAKYFESKGYGKMIPEDQLTQFKLLEQLKQIESHRTDITHQMESYKESYTKEDLFNKILNDAL persistent 355 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 2.4.1.227 GO:0050511 WP_017176325.1 UPI0002D41457 UniRef100_A0A4Q9WUB3,UniRef50_Q2FYL5,UniRef90_A0A4Q9WUB3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 279822 279996 . - . GCA_005502385.1_00811_gene GCA_005502385.1_00811 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 279822 279996 . - . GCA_005502385.1_00811_mRNA GCA_005502385.1_00811 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 Infernal:001001 misc_RNA 279822 279996 124.9 - . GCA_005502385.1_00811 GCA_005502385.1_00811_gene,GCA_005502385.1_00811_mRNA GCA_005502385.1_00811 S414 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 280379 281002 . + . GCA_005502385.1_00812_gene GCA_005502385.1_00812 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNRTKRITLLIVFTLIFGIIAFFHESRLGKWIDNEVYEFIYASESFITTSILLGATKIGEVWAMVCLSLMLVAYLMLKRYKIEALFFVITMSLSSILNPLLKNIFDRERPTLLLLIDISGFSFPSGHAMGSTSFFGSAMYIAQRRASGSTKGVIIGLCAALILLISISRVYLGVHYPTDIIAGIIGGAFCIVLSTLVLKGLHEPTTL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 280379 281002 . + . GCA_005502385.1_00812_mRNA GCA_005502385.1_00812 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNRTKRITLLIVFTLIFGIIAFFHESRLGKWIDNEVYEFIYASESFITTSILLGATKIGEVWAMVCLSLMLVAYLMLKRYKIEALFFVITMSLSSILNPLLKNIFDRERPTLLLLIDISGFSFPSGHAMGSTSFFGSAMYIAQRRASGSTKGVIIGLCAALILLISISRVYLGVHYPTDIIAGIIGGAFCIVLSTLVLKGLHEPTTL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 280379 281002 . + 0 GCA_005502385.1_00812 GCA_005502385.1_00812_gene,GCA_005502385.1_00812_mRNA GCA_005502385.1_00812 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNRTKRITLLIVFTLIFGIIAFFHESRLGKWIDNEVYEFIYASESFITTSILLGATKIGEVWAMVCLSLMLVAYLMLKRYKIEALFFVITMSLSSILNPLLKNIFDRERPTLLLLIDISGFSFPSGHAMGSTSFFGSAMYIAQRRASGSTKGVIIGLCAALILLISISRVYLGVHYPTDIIAGIIGGAFCIVLSTLVLKGLHEPTTL persistent 207 Phosphatase PAP2 family protein UniRef50_Q2FYL6,UniRef90_A0A974KZ85 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 281327 281986 . + . GCA_005502385.1_00813_gene GCA_005502385.1_00813 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTNILIVEDEQNLARFLELELTHENYKVDIEYDGEPGLEKALNNDFDLIILDLMLPNINGLEICRRVRQVQSTPIIIITAKSDTYDKVTGLDYGADDYIVKPFEIEELFARIRAVLRRQPHKDIIDINGIRIDIDAFKVTVDGKQLDFTKTEYDLLYLLATNRNHVLQREQILNHVWGYNSEVETNVVDVYIRYLRNKLKPFNKEKVIETVRGVGYVIR . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 281327 281986 . + . GCA_005502385.1_00813_mRNA GCA_005502385.1_00813 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTNILIVEDEQNLARFLELELTHENYKVDIEYDGEPGLEKALNNDFDLIILDLMLPNINGLEICRRVRQVQSTPIIIITAKSDTYDKVTGLDYGADDYIVKPFEIEELFARIRAVLRRQPHKDIIDINGIRIDIDAFKVTVDGKQLDFTKTEYDLLYLLATNRNHVLQREQILNHVWGYNSEVETNVVDVYIRYLRNKLKPFNKEKVIETVRGVGYVIR . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 281327 281986 . + 0 GCA_005502385.1_00813 GCA_005502385.1_00813_gene,GCA_005502385.1_00813_mRNA GCA_005502385.1_00813 Response regulator ArlR GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTNILIVEDEQNLARFLELELTHENYKVDIEYDGEPGLEKALNNDFDLIILDLMLPNINGLEICRRVRQVQSTPIIIITAKSDTYDKVTGLDYGADDYIVKPFEIEELFARIRAVLRRQPHKDIIDINGIRIDIDAFKVTVDGKQLDFTKTEYDLLYLLATNRNHVLQREQILNHVWGYNSEVETNVVDVYIRYLRNKLKPFNKEKVIETVRGVGYVIR persistent 219 arlR Response regulator ArlR WP_054105577.1 UPI0006B9F78E UniRef100_UPI0006B9F78E,UniRef50_Q49XM7,UniRef90_A0A3S7GSP0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 281986 283344 . + . GCA_005502385.1_00814_gene GCA_005502385.1_00814 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKNHTLQYKWMTITTLIMFTTIILFCLIIIFFLKDTLREGEVDEAEHSLSDIVNLIQTRPINNISILDLSASLENYEEVIIYNHTGQRIMKSSNESTIQFIPNNNLQKTDRIQVMRNNGKEYLVITEPLHSPNFKGYSVLIHSLEHYNNLVKSLYIIAVVFGLLATVITACISYFISKNITKPLVTMSNKMNQIRRDGFQNKLELDTSYEETDNLIETFNEMMYQIEASFNQQRQFVEDASHELRTPLQIIQGHLNLIKRWGKKDPAILEESLNISLEEMNRITKLVEELLLLTKDKVNMQSLEKEDVDINEEIQSRIKALQQLHPDYLFEIELEQKPLVLQINRHQFEQLILIFIDNAMKYDKERKHICIKTQLRNKQISIEITDHGLGIPKEDQEFIFDRFYRVDKSRARSQGGNGLGLSIAEKIVSQYGGYISVHSELNKFTTFKINFK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 281986 283344 . + . GCA_005502385.1_00814_mRNA GCA_005502385.1_00814 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKNHTLQYKWMTITTLIMFTTIILFCLIIIFFLKDTLREGEVDEAEHSLSDIVNLIQTRPINNISILDLSASLENYEEVIIYNHTGQRIMKSSNESTIQFIPNNNLQKTDRIQVMRNNGKEYLVITEPLHSPNFKGYSVLIHSLEHYNNLVKSLYIIAVVFGLLATVITACISYFISKNITKPLVTMSNKMNQIRRDGFQNKLELDTSYEETDNLIETFNEMMYQIEASFNQQRQFVEDASHELRTPLQIIQGHLNLIKRWGKKDPAILEESLNISLEEMNRITKLVEELLLLTKDKVNMQSLEKEDVDINEEIQSRIKALQQLHPDYLFEIELEQKPLVLQINRHQFEQLILIFIDNAMKYDKERKHICIKTQLRNKQISIEITDHGLGIPKEDQEFIFDRFYRVDKSRARSQGGNGLGLSIAEKIVSQYGGYISVHSELNKFTTFKINFK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 281986 283344 . + 0 GCA_005502385.1_00814 GCA_005502385.1_00814_gene,GCA_005502385.1_00814_mRNA GCA_005502385.1_00814 Signal transduction histidine-protein kinase ArlS GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKNHTLQYKWMTITTLIMFTTIILFCLIIIFFLKDTLREGEVDEAEHSLSDIVNLIQTRPINNISILDLSASLENYEEVIIYNHTGQRIMKSSNESTIQFIPNNNLQKTDRIQVMRNNGKEYLVITEPLHSPNFKGYSVLIHSLEHYNNLVKSLYIIAVVFGLLATVITACISYFISKNITKPLVTMSNKMNQIRRDGFQNKLELDTSYEETDNLIETFNEMMYQIEASFNQQRQFVEDASHELRTPLQIIQGHLNLIKRWGKKDPAILEESLNISLEEMNRITKLVEELLLLTKDKVNMQSLEKEDVDINEEIQSRIKALQQLHPDYLFEIELEQKPLVLQINRHQFEQLILIFIDNAMKYDKERKHICIKTQLRNKQISIEITDHGLGIPKEDQEFIFDRFYRVDKSRARSQGGNGLGLSIAEKIVSQYGGYISVHSELNKFTTFKINFK persistent 452 arlS Signal transduction histidine-protein kinase ArlS 2.7.13.3 UniRef50_Q9KJN3,UniRef90_A0A3S7GVG7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 283515 286322 . + . GCA_005502385.1_00815_gene GCA_005502385.1_00815 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKDKRDVTEAPVNFGANLGLMLDLYNDYLQDPTSVSDDLQVLFSTIKNGEAQVKAKFTTDGSGTSADDNTIKRVMRLIDNIRQYGHLKADIYPVNAPKRTHIPKLEIEAFNLDKETLKNISSGIVSDHFSDIYDNAYEALKRMEKRYKGSIAFEYNHINNNKERTWLKRRIETPYKATINSDEKINLFKTLAHVEGFEKYLHKNFVGAKRFSIEGVDTLVPMLQHTLKRAAQEDIQNIQIGMAHRGRLNVLTHVLEKPYEMMISEFMHTDPMKFLPEDGSLKLTAGWTGDVKYHLGGVKTTSSYGIEQCISLANNPSHLEIVAPVVIGKTRAAQDDTHHAGGPTTDFHHGMPIIIHGDAAYPGQGINFETMNLSNLDGYSTGGALHIITNNRIGFTTEPIDGRSTTYSSDIAKGYDVPILHVNADDVEATIEAIDIAMEFRKEFHKDFVIDLVGYRRYGHNEMDEPSITNPTLYHNIRQHDSVEVIYGNKLVDEGILTKEQMSEIIDSVQKEMRTAQDKIDKSDKMNSTAMNKPESLQLPLQSDEKEFSFEHLKEINDAMLNYPEDFQVFRKLNKVLEKRREPFENENGLVDWAQAEQLAFATIVQDGISIRLTGQDSERGTFSHRHAVLHDEDNGNTYTPLHHVPNQKATFEVHNSPLSEAAVVGFEYGYNVENKNSMNIWEAQYGDFSNMAQMMFDNFMSSARAKWGERSGLTLFLPHAFEGQGPEHSSARLERFLQLAAENNSTVVNLSSSSNYFHLLRAQAKSLNTEAMRPLIVMSPKSLLRNKTVAKPISEFTTGSFKPIIVEDAQKAKVTKVILASGKMFIDLKETLAKEPNENIQLIAVERLYPFPEEDIKKALEELPNLESVAWVQEEPKNQGAWLFVYPYLKSIVGHQYNLSYQGRIQRAAPAEGDGEIHKLVQHKIIENSVKNN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 283515 286322 . + . GCA_005502385.1_00815_mRNA GCA_005502385.1_00815 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKDKRDVTEAPVNFGANLGLMLDLYNDYLQDPTSVSDDLQVLFSTIKNGEAQVKAKFTTDGSGTSADDNTIKRVMRLIDNIRQYGHLKADIYPVNAPKRTHIPKLEIEAFNLDKETLKNISSGIVSDHFSDIYDNAYEALKRMEKRYKGSIAFEYNHINNNKERTWLKRRIETPYKATINSDEKINLFKTLAHVEGFEKYLHKNFVGAKRFSIEGVDTLVPMLQHTLKRAAQEDIQNIQIGMAHRGRLNVLTHVLEKPYEMMISEFMHTDPMKFLPEDGSLKLTAGWTGDVKYHLGGVKTTSSYGIEQCISLANNPSHLEIVAPVVIGKTRAAQDDTHHAGGPTTDFHHGMPIIIHGDAAYPGQGINFETMNLSNLDGYSTGGALHIITNNRIGFTTEPIDGRSTTYSSDIAKGYDVPILHVNADDVEATIEAIDIAMEFRKEFHKDFVIDLVGYRRYGHNEMDEPSITNPTLYHNIRQHDSVEVIYGNKLVDEGILTKEQMSEIIDSVQKEMRTAQDKIDKSDKMNSTAMNKPESLQLPLQSDEKEFSFEHLKEINDAMLNYPEDFQVFRKLNKVLEKRREPFENENGLVDWAQAEQLAFATIVQDGISIRLTGQDSERGTFSHRHAVLHDEDNGNTYTPLHHVPNQKATFEVHNSPLSEAAVVGFEYGYNVENKNSMNIWEAQYGDFSNMAQMMFDNFMSSARAKWGERSGLTLFLPHAFEGQGPEHSSARLERFLQLAAENNSTVVNLSSSSNYFHLLRAQAKSLNTEAMRPLIVMSPKSLLRNKTVAKPISEFTTGSFKPIIVEDAQKAKVTKVILASGKMFIDLKETLAKEPNENIQLIAVERLYPFPEEDIKKALEELPNLESVAWVQEEPKNQGAWLFVYPYLKSIVGHQYNLSYQGRIQRAAPAEGDGEIHKLVQHKIIENSVKNN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 283515 286322 . + 0 GCA_005502385.1_00815 GCA_005502385.1_00815_gene,GCA_005502385.1_00815_mRNA GCA_005502385.1_00815 2-oxoglutarate dehydrogenase E1 component GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKDKRDVTEAPVNFGANLGLMLDLYNDYLQDPTSVSDDLQVLFSTIKNGEAQVKAKFTTDGSGTSADDNTIKRVMRLIDNIRQYGHLKADIYPVNAPKRTHIPKLEIEAFNLDKETLKNISSGIVSDHFSDIYDNAYEALKRMEKRYKGSIAFEYNHINNNKERTWLKRRIETPYKATINSDEKINLFKTLAHVEGFEKYLHKNFVGAKRFSIEGVDTLVPMLQHTLKRAAQEDIQNIQIGMAHRGRLNVLTHVLEKPYEMMISEFMHTDPMKFLPEDGSLKLTAGWTGDVKYHLGGVKTTSSYGIEQCISLANNPSHLEIVAPVVIGKTRAAQDDTHHAGGPTTDFHHGMPIIIHGDAAYPGQGINFETMNLSNLDGYSTGGALHIITNNRIGFTTEPIDGRSTTYSSDIAKGYDVPILHVNADDVEATIEAIDIAMEFRKEFHKDFVIDLVGYRRYGHNEMDEPSITNPTLYHNIRQHDSVEVIYGNKLVDEGILTKEQMSEIIDSVQKEMRTAQDKIDKSDKMNSTAMNKPESLQLPLQSDEKEFSFEHLKEINDAMLNYPEDFQVFRKLNKVLEKRREPFENENGLVDWAQAEQLAFATIVQDGISIRLTGQDSERGTFSHRHAVLHDEDNGNTYTPLHHVPNQKATFEVHNSPLSEAAVVGFEYGYNVENKNSMNIWEAQYGDFSNMAQMMFDNFMSSARAKWGERSGLTLFLPHAFEGQGPEHSSARLERFLQLAAENNSTVVNLSSSSNYFHLLRAQAKSLNTEAMRPLIVMSPKSLLRNKTVAKPISEFTTGSFKPIIVEDAQKAKVTKVILASGKMFIDLKETLAKEPNENIQLIAVERLYPFPEEDIKKALEELPNLESVAWVQEEPKNQGAWLFVYPYLKSIVGHQYNLSYQGRIQRAAPAEGDGEIHKLVQHKIIENSVKNN persistent 935 2-oxoglutarate dehydrogenase E1 component 1.2.4.2 GO:0004591,GO:0006099,GO:0030976 UniRef50_P0C601,UniRef90_A0A974QNH1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 286334 287641 . + . GCA_005502385.1_00816_gene GCA_005502385.1_00816 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAEVKVPELAESITEGTVAEWLKNIGDNIEKGDAILELETDKVNVEVVSEEDGILQEQLASEGDTVEVGQAIAIVGEGKGSTSSSSESQNNDSNSENENTKTDSAKTNHSTSHTSTEAQGSDTSSNDDSESINNKRVNATPSARRHARKNGIDLNEVAGKGSDVIRKEDVDNRQKPSQSNQNTQPNSQQETSKKSTANTPNKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDMTNVMELRKRKKEQFIKDHDGTKLGFMSFFTKAAVAALKKYPEVNAEIDGDDMITKQYYDIGIAVSTDDGLLVPFVRDCDKKNFAELEKSIADLAVKARDKKLGLDDMVNGSFTITNGGVFGSMMSTPIINGNQAAILGMHSIITRPIAIDKDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIESPEDLLLES . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 286334 287641 . + . GCA_005502385.1_00816_mRNA GCA_005502385.1_00816 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAEVKVPELAESITEGTVAEWLKNIGDNIEKGDAILELETDKVNVEVVSEEDGILQEQLASEGDTVEVGQAIAIVGEGKGSTSSSSESQNNDSNSENENTKTDSAKTNHSTSHTSTEAQGSDTSSNDDSESINNKRVNATPSARRHARKNGIDLNEVAGKGSDVIRKEDVDNRQKPSQSNQNTQPNSQQETSKKSTANTPNKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDMTNVMELRKRKKEQFIKDHDGTKLGFMSFFTKAAVAALKKYPEVNAEIDGDDMITKQYYDIGIAVSTDDGLLVPFVRDCDKKNFAELEKSIADLAVKARDKKLGLDDMVNGSFTITNGGVFGSMMSTPIINGNQAAILGMHSIITRPIAIDKDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIESPEDLLLES . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 286334 287641 . + 0 GCA_005502385.1_00816 GCA_005502385.1_00816_gene,GCA_005502385.1_00816_mRNA GCA_005502385.1_00816 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAEVKVPELAESITEGTVAEWLKNIGDNIEKGDAILELETDKVNVEVVSEEDGILQEQLASEGDTVEVGQAIAIVGEGKGSTSSSSESQNNDSNSENENTKTDSAKTNHSTSHTSTEAQGSDTSSNDDSESINNKRVNATPSARRHARKNGIDLNEVAGKGSDVIRKEDVDNRQKPSQSNQNTQPNSQQETSKKSTANTPNKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDMTNVMELRKRKKEQFIKDHDGTKLGFMSFFTKAAVAALKKYPEVNAEIDGDDMITKQYYDIGIAVSTDDGLLVPFVRDCDKKNFAELEKSIADLAVKARDKKLGLDDMVNGSFTITNGGVFGSMMSTPIINGNQAAILGMHSIITRPIAIDKDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIESPEDLLLES persistent 435 odhB 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase 2.3.1.61 GO:0004149,GO:0006099,GO:0045252 WP_054105579.1 UPI0006B9B981 UniRef100_UPI0006B9B981,UniRef50_P16263,UniRef90_A0A657M117 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 287839 288015 . + . GCA_005502385.1_00817_gene GCA_005502385.1_00817 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYPNNENIKNSREAHPSLSIYDFSKADANMYKNDKLSIIFGQKTTNILKSITKESIKK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 287839 288015 . + . GCA_005502385.1_00817_mRNA GCA_005502385.1_00817 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYPNNENIKNSREAHPSLSIYDFSKADANMYKNDKLSIIFGQKTTNILKSITKESIKK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 287839 288015 . + 0 GCA_005502385.1_00817 GCA_005502385.1_00817_gene,GCA_005502385.1_00817_mRNA GCA_005502385.1_00817 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYPNNENIKNSREAHPSLSIYDFSKADANMYKNDKLSIIFGQKTTNILKSITKESIKK shell 58 hypothetical protein WP_170076340.1 UPI0008C7BB92 UniRef100_UPI0008C7BB92,UniRef50_A0A6N0I4P1,UniRef90_A0A8X8KET3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 288321 289130 . + . GCA_005502385.1_00818_gene GCA_005502385.1_00818 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSGLRSVTIGTSDLSKTQNLFHNILGLNVATKRQALRFGDAELNPGTRLHFVEVPNPNYRNVHISSVGLRTPSNAGLEEYQQILEKNNIQFSSITELNGNQHFNFKDDNHQIFDIYSNELNVGIGLGTPTFESAVNPLHQIQGLGPVIIKVNELLVTTSIFKNVFNLTHYAEYESTEFPDQTVQVFKIGDGGLGGEIHLYQSNEQVELKEEGIVEQIEFSTNSTEDFEHARKELDEIGIPYQILNQGDAQSLRITEGSGISFIYTLEKK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 288321 289130 . + . GCA_005502385.1_00818_mRNA GCA_005502385.1_00818 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSGLRSVTIGTSDLSKTQNLFHNILGLNVATKRQALRFGDAELNPGTRLHFVEVPNPNYRNVHISSVGLRTPSNAGLEEYQQILEKNNIQFSSITELNGNQHFNFKDDNHQIFDIYSNELNVGIGLGTPTFESAVNPLHQIQGLGPVIIKVNELLVTTSIFKNVFNLTHYAEYESTEFPDQTVQVFKIGDGGLGGEIHLYQSNEQVELKEEGIVEQIEFSTNSTEDFEHARKELDEIGIPYQILNQGDAQSLRITEGSGISFIYTLEKK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 288321 289130 . + 0 GCA_005502385.1_00818 GCA_005502385.1_00818_gene,GCA_005502385.1_00818_mRNA GCA_005502385.1_00818 Putative ring-cleaving dioxygenase MhqA GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSGLRSVTIGTSDLSKTQNLFHNILGLNVATKRQALRFGDAELNPGTRLHFVEVPNPNYRNVHISSVGLRTPSNAGLEEYQQILEKNNIQFSSITELNGNQHFNFKDDNHQIFDIYSNELNVGIGLGTPTFESAVNPLHQIQGLGPVIIKVNELLVTTSIFKNVFNLTHYAEYESTEFPDQTVQVFKIGDGGLGGEIHLYQSNEQVELKEEGIVEQIEFSTNSTEDFEHARKELDEIGIPYQILNQGDAQSLRITEGSGISFIYTLEKK persistent 269 Lactoylglutathione lyase WP_017176332.1 UPI0002E2F2CA UniRef100_A0A4Q9WT11,UniRef50_A0A6N3AGB1,UniRef90_A0AAE5JP49 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 289159 289368 . + . GCA_005502385.1_00819_gene GCA_005502385.1_00819 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAMLHEDWKSRTPIKQVMVVNTDAKKFTVSDMLTIGKQYDVINETEEYYQIIDNSGLVGGYYKDYFKEV . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 289159 289368 . + . GCA_005502385.1_00819_mRNA GCA_005502385.1_00819 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAMLHEDWKSRTPIKQVMVVNTDAKKFTVSDMLTIGKQYDVINETEEYYQIIDNSGLVGGYYKDYFKEV . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 289159 289368 . + 0 GCA_005502385.1_00819 GCA_005502385.1_00819_gene,GCA_005502385.1_00819_mRNA GCA_005502385.1_00819 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAMLHEDWKSRTPIKQVMVVNTDAKKFTVSDMLTIGKQYDVINETEEYYQIIDNSGLVGGYYKDYFKEV persistent 69 DUF6501 domain-containing protein UniRef50_O31848,UniRef90_UPI000D1FB5BC . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 289486 290277 . + . GCA_005502385.1_00820_gene GCA_005502385.1_00820 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPNNHYINSDQSVFNDAQALFNLNKNILLKGPTGSGKTRLAETLSEVVQTPMHQVNCSVDLDAESLLGFKTIKTNEQGQQEIIFIDGPVIKAMREGHILYIDEINMAKPETLPILNGVLDYRRQLTNPFTGEVIKAAPGFNVIAAINEGYVGTLPMNEALKNRFIVIQVDYIGGDILKDVIKQQSQLQDDDIIKKIIKFNEDLRTMSKQGQISEEAASIRALIDLSDLITVMPIERAIQRTIIDKLEDEREQQAIRNAIELNF . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 289486 290277 . + . GCA_005502385.1_00820_mRNA GCA_005502385.1_00820 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPNNHYINSDQSVFNDAQALFNLNKNILLKGPTGSGKTRLAETLSEVVQTPMHQVNCSVDLDAESLLGFKTIKTNEQGQQEIIFIDGPVIKAMREGHILYIDEINMAKPETLPILNGVLDYRRQLTNPFTGEVIKAAPGFNVIAAINEGYVGTLPMNEALKNRFIVIQVDYIGGDILKDVIKQQSQLQDDDIIKKIIKFNEDLRTMSKQGQISEEAASIRALIDLSDLITVMPIERAIQRTIIDKLEDEREQQAIRNAIELNF . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 289486 290277 . + 0 GCA_005502385.1_00820 GCA_005502385.1_00820_gene,GCA_005502385.1_00820_mRNA GCA_005502385.1_00820 Denitrification regulatory protein NirQ GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPNNHYINSDQSVFNDAQALFNLNKNILLKGPTGSGKTRLAETLSEVVQTPMHQVNCSVDLDAESLLGFKTIKTNEQGQQEIIFIDGPVIKAMREGHILYIDEINMAKPETLPILNGVLDYRRQLTNPFTGEVIKAAPGFNVIAAINEGYVGTLPMNEALKNRFIVIQVDYIGGDILKDVIKQQSQLQDDDIIKKIIKFNEDLRTMSKQGQISEEAASIRALIDLSDLITVMPIERAIQRTIIDKLEDEREQQAIRNAIELNF persistent 263 mMP0363 Uncharacterized protein SH1500 GO:0005524,GO:0016887 COG0714,R WP_017176334.1 UPI0002EE6E64 UniRef100_A0A4V6MZH4,UniRef50_Q49XL1,UniRef90_Q4L6B6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 290290 292179 . + . GCA_005502385.1_00821_gene GCA_005502385.1_00821 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSDRFIKFNDEQLDAKQVMMLQDLARLLLKNEQTKVKIQKFPYYDPINNTLITSWFWSHRPKDIESAGLKTDVMLAAYGYKMMDEAIVNEVLHDNEFSHSKFYHQLFRLLEDMRVFNFIKEERPSTAKQIDLRVKTRLSYTESQIKFYKTKTVYTDLLFLYLERAFLSQNFFDIPTIHPQLDDILNHMFQYLPDFFQNESSEDNMYLAQRVMFQIDEMLSHDMLNEYYHLPRKVYEAIHEMSYEDIKRMDASNVDGQDNTNEETDTTSAEAETNAQDSKSEGGAYLEMELHEGENSDVMSDNDTAREGDSTDDMTDMMTKKGRGSNHALDRDEGGSIGSNPSFALRGINENVEIEWKVPDIEPEYISSYQQVKNEVQFETKDLIQIIKKTIDREHVDERHNLTKGRLQRDLTNWFIDDQYKLFYKKQDLSKTFDATFTLLIDVSASMFDKMEETIKGVVLFHETLKALNVKHEILAFNEDAFDSDDRKQPNIIDEIVHYDRSIMEKSGPRIMSLHPQDDNRDGVAIRIASERLLRRSHQQRFLIIFSDGEPSAYNYAQDGILDTYEAVEMARKFGIEVFNVFLSQDPITEDIEETIHNIYGQFALFVEGVENLPSHLSPLLKKLLLKSF . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 290290 292179 . + . GCA_005502385.1_00821_mRNA GCA_005502385.1_00821 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSDRFIKFNDEQLDAKQVMMLQDLARLLLKNEQTKVKIQKFPYYDPINNTLITSWFWSHRPKDIESAGLKTDVMLAAYGYKMMDEAIVNEVLHDNEFSHSKFYHQLFRLLEDMRVFNFIKEERPSTAKQIDLRVKTRLSYTESQIKFYKTKTVYTDLLFLYLERAFLSQNFFDIPTIHPQLDDILNHMFQYLPDFFQNESSEDNMYLAQRVMFQIDEMLSHDMLNEYYHLPRKVYEAIHEMSYEDIKRMDASNVDGQDNTNEETDTTSAEAETNAQDSKSEGGAYLEMELHEGENSDVMSDNDTAREGDSTDDMTDMMTKKGRGSNHALDRDEGGSIGSNPSFALRGINENVEIEWKVPDIEPEYISSYQQVKNEVQFETKDLIQIIKKTIDREHVDERHNLTKGRLQRDLTNWFIDDQYKLFYKKQDLSKTFDATFTLLIDVSASMFDKMEETIKGVVLFHETLKALNVKHEILAFNEDAFDSDDRKQPNIIDEIVHYDRSIMEKSGPRIMSLHPQDDNRDGVAIRIASERLLRRSHQQRFLIIFSDGEPSAYNYAQDGILDTYEAVEMARKFGIEVFNVFLSQDPITEDIEETIHNIYGQFALFVEGVENLPSHLSPLLKKLLLKSF . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 290290 292179 . + 0 GCA_005502385.1_00821 GCA_005502385.1_00821_gene,GCA_005502385.1_00821_mRNA GCA_005502385.1_00821 hypothetical protein """""" GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSDRFIKFNDEQLDAKQVMMLQDLARLLLKNEQTKVKIQKFPYYDPINNTLITSWFWSHRPKDIESAGLKTDVMLAAYGYKMMDEAIVNEVLHDNEFSHSKFYHQLFRLLEDMRVFNFIKEERPSTAKQIDLRVKTRLSYTESQIKFYKTKTVYTDLLFLYLERAFLSQNFFDIPTIHPQLDDILNHMFQYLPDFFQNESSEDNMYLAQRVMFQIDEMLSHDMLNEYYHLPRKVYEAIHEMSYEDIKRMDASNVDGQDNTNEETDTTSAEAETNAQDSKSEGGAYLEMELHEGENSDVMSDNDTAREGDSTDDMTDMMTKKGRGSNHALDRDEGGSIGSNPSFALRGINENVEIEWKVPDIEPEYISSYQQVKNEVQFETKDLIQIIKKTIDREHVDERHNLTKGRLQRDLTNWFIDDQYKLFYKKQDLSKTFDATFTLLIDVSASMFDKMEETIKGVVLFHETLKALNVKHEILAFNEDAFDSDDRKQPNIIDEIVHYDRSIMEKSGPRIMSLHPQDDNRDGVAIRIASERLLRRSHQQRFLIIFSDGEPSAYNYAQDGILDTYEAVEMARKFGIEVFNVFLSQDPITEDIEETIHNIYGQFALFVEGVENLPSHLSPLLKKLLLKSF persistent 629 VWFA domain-containing protein WP_137689489.1 UPI000929A14C UniRef100_UPI000929A14C,UniRef50_A0A380G8L3,UniRef90_A0A6N0I459 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 292299 293642 . + . GCA_005502385.1_00822_gene GCA_005502385.1_00822 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNKHTWIIGFTLFAMFFGAGNLIFPPNLGQESGAYFWPAILAFCLTGIGLPLLGVVVGALDKQGYIGAFNKLSPRFSVIFLIIIYLTIGPLFAIPRTASTSFEMTITPITHSNSNMSLFIFTLIYFIVVLYLCINPGKIVDRIGSLLTPLLLITILAMIIKGFVDYKGHSSSHGNPEIYSSNIESFSHGFIEGYLTMDAIAAIAFSMIVVNAIKATGVKHTNQIFKQTVIAGFIAALALIFIYVSLGYIGNHMGISQNTITSLMAKNQNIGTYLLTTMATNGFGILGKYLLGIIVALACLTTACGLIVSVSQYFYSIFSKISYKVYVIGFTIISFILANLGLNSVINMSVPVLSIIYPVAITMIILILLARFIPTKPIAQQIPIIIVSLVSIVSTINTLGLIKLNVINHLPLKQYSLEWLPIAIISIIMGYIVSKFINQSYIVYQKE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 292299 293642 . + . GCA_005502385.1_00822_mRNA GCA_005502385.1_00822 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNKHTWIIGFTLFAMFFGAGNLIFPPNLGQESGAYFWPAILAFCLTGIGLPLLGVVVGALDKQGYIGAFNKLSPRFSVIFLIIIYLTIGPLFAIPRTASTSFEMTITPITHSNSNMSLFIFTLIYFIVVLYLCINPGKIVDRIGSLLTPLLLITILAMIIKGFVDYKGHSSSHGNPEIYSSNIESFSHGFIEGYLTMDAIAAIAFSMIVVNAIKATGVKHTNQIFKQTVIAGFIAALALIFIYVSLGYIGNHMGISQNTITSLMAKNQNIGTYLLTTMATNGFGILGKYLLGIIVALACLTTACGLIVSVSQYFYSIFSKISYKVYVIGFTIISFILANLGLNSVINMSVPVLSIIYPVAITMIILILLARFIPTKPIAQQIPIIIVSLVSIVSTINTLGLIKLNVINHLPLKQYSLEWLPIAIISIIMGYIVSKFINQSYIVYQKE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 292299 293642 . + 0 GCA_005502385.1_00822 GCA_005502385.1_00822_gene,GCA_005502385.1_00822_mRNA GCA_005502385.1_00822 Branched-chain amino acid transport system 2 carrier protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNKHTWIIGFTLFAMFFGAGNLIFPPNLGQESGAYFWPAILAFCLTGIGLPLLGVVVGALDKQGYIGAFNKLSPRFSVIFLIIIYLTIGPLFAIPRTASTSFEMTITPITHSNSNMSLFIFTLIYFIVVLYLCINPGKIVDRIGSLLTPLLLITILAMIIKGFVDYKGHSSSHGNPEIYSSNIESFSHGFIEGYLTMDAIAAIAFSMIVVNAIKATGVKHTNQIFKQTVIAGFIAALALIFIYVSLGYIGNHMGISQNTITSLMAKNQNIGTYLLTTMATNGFGILGKYLLGIIVALACLTTACGLIVSVSQYFYSIFSKISYKVYVIGFTIISFILANLGLNSVINMSVPVLSIIYPVAITMIILILLARFIPTKPIAQQIPIIIVSLVSIVSTINTLGLIKLNVINHLPLKQYSLEWLPIAIISIIMGYIVSKFINQSYIVYQKE persistent 447 brnQ branched-chain amino acid transport system II carrier protein GO:0015658,GO:0015803,GO:0016020 WP_048681471.1 UPI0006605870 UniRef100_UPI0006605870,UniRef50_Q2FYM4,UniRef90_A0A8X8GH14 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 293699 294838 . - . GCA_005502385.1_00823_gene GCA_005502385.1_00823 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNQKDQFINSHPLDDYIDHQTHDVSTQNVKQDFEQQFNEQDLKKIDSISQQIKPLDSEGLLSFGTHLQQNMSQFSHQMLDEVQSKDVGPIGDTLNQLMSKLREVNPDDLNQDNQSKLKRLFRRTKASINEVFSRMQSVSSQVDRITIQLDKHKGNLTKDIQLLDHLYEQNKVYFEDVSLYIAAAQRKKQEINANELPKLRQHAEQSGNQMDIQSVADMEQFVDRLDKKIYDLQLSRQIAIQTAPQIRMIQNVNQALAEKIQSSILTSIPLWKNQMAIALTLMRQKNAVTAQRAVTDTTNDLLTRNAAMLKQNAIETATENERGIVDIETLKATQNDIIETIEQTLQIQYNGRQKRQQAERELSQLENELKEHLLTMKKE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 293699 294838 . - . GCA_005502385.1_00823_mRNA GCA_005502385.1_00823 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNQKDQFINSHPLDDYIDHQTHDVSTQNVKQDFEQQFNEQDLKKIDSISQQIKPLDSEGLLSFGTHLQQNMSQFSHQMLDEVQSKDVGPIGDTLNQLMSKLREVNPDDLNQDNQSKLKRLFRRTKASINEVFSRMQSVSSQVDRITIQLDKHKGNLTKDIQLLDHLYEQNKVYFEDVSLYIAAAQRKKQEINANELPKLRQHAEQSGNQMDIQSVADMEQFVDRLDKKIYDLQLSRQIAIQTAPQIRMIQNVNQALAEKIQSSILTSIPLWKNQMAIALTLMRQKNAVTAQRAVTDTTNDLLTRNAAMLKQNAIETATENERGIVDIETLKATQNDIIETIEQTLQIQYNGRQKRQQAERELSQLENELKEHLLTMKKE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 293699 294838 . - 0 GCA_005502385.1_00823 GCA_005502385.1_00823_gene,GCA_005502385.1_00823_mRNA GCA_005502385.1_00823 TelA-like protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNQKDQFINSHPLDDYIDHQTHDVSTQNVKQDFEQQFNEQDLKKIDSISQQIKPLDSEGLLSFGTHLQQNMSQFSHQMLDEVQSKDVGPIGDTLNQLMSKLREVNPDDLNQDNQSKLKRLFRRTKASINEVFSRMQSVSSQVDRITIQLDKHKGNLTKDIQLLDHLYEQNKVYFEDVSLYIAAAQRKKQEINANELPKLRQHAEQSGNQMDIQSVADMEQFVDRLDKKIYDLQLSRQIAIQTAPQIRMIQNVNQALAEKIQSSILTSIPLWKNQMAIALTLMRQKNAVTAQRAVTDTTNDLLTRNAAMLKQNAIETATENERGIVDIETLKATQNDIIETIEQTLQIQYNGRQKRQQAERELSQLENELKEHLLTMKKE persistent 379 TelA-like protein WP_048762438.1 UPI0006616568 UniRef100_UPI0006616568,UniRef50_Q49XK7,UniRef90_A0A8X8GN16 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 294874 295500 . - . GCA_005502385.1_00824_gene GCA_005502385.1_00824 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRYNLSRLLGVLVGIPIAIISWVTSVFGFDLSFILDALIGIGMFFVSYFPTQRLTSKKYLNEIGLSRRDYRFVNQQLNQSHNKIRNILKSYINIRSIKDFRQINDIYKISKSIHFAVKQRPSSFFKVESFFYSHIDNALNLIDAYTRLSKMPKKSAEEKQKLEQTRITLDEVKRTLIADLKRLNEDDYERLDIEMELNRLQHKRYKKY . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 294874 295500 . - . GCA_005502385.1_00824_mRNA GCA_005502385.1_00824 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRYNLSRLLGVLVGIPIAIISWVTSVFGFDLSFILDALIGIGMFFVSYFPTQRLTSKKYLNEIGLSRRDYRFVNQQLNQSHNKIRNILKSYINIRSIKDFRQINDIYKISKSIHFAVKQRPSSFFKVESFFYSHIDNALNLIDAYTRLSKMPKKSAEEKQKLEQTRITLDEVKRTLIADLKRLNEDDYERLDIEMELNRLQHKRYKKY . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 294874 295500 . - 0 GCA_005502385.1_00824 GCA_005502385.1_00824_gene,GCA_005502385.1_00824_mRNA GCA_005502385.1_00824 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRYNLSRLLGVLVGIPIAIISWVTSVFGFDLSFILDALIGIGMFFVSYFPTQRLTSKKYLNEIGLSRRDYRFVNQQLNQSHNKIRNILKSYINIRSIKDFRQINDIYKISKSIHFAVKQRPSSFFKVESFFYSHIDNALNLIDAYTRLSKMPKKSAEEKQKLEQTRITLDEVKRTLIADLKRLNEDDYERLDIEMELNRLQHKRYKKY persistent 208 5-bromo-4-chloroindolyl phosphate hydrolase WP_017176338.1 UPI0003180387 UniRef100_A0A4Q9WS90,UniRef50_K9AM25,UniRef90_A0AAE5JND8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 295518 295793 . - . GCA_005502385.1_00825_gene GCA_005502385.1_00825 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMQHKHIQVFGTVQGVGFRHHTELIAKKLDIFGTVQNVEDYVDIYAQGDEEKIKSFINKVIAGASPASSVSDYSIEDLDVTNRYSEFKTIY . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 295518 295793 . - . GCA_005502385.1_00825_mRNA GCA_005502385.1_00825 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMQHKHIQVFGTVQGVGFRHHTELIAKKLDIFGTVQNVEDYVDIYAQGDEEKIKSFINKVIAGASPASSVSDYSIEDLDVTNRYSEFKTIY . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 295518 295793 . - 0 GCA_005502385.1_00825 GCA_005502385.1_00825_gene,GCA_005502385.1_00825_mRNA GCA_005502385.1_00825 Acylphosphatase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMQHKHIQVFGTVQGVGFRHHTELIAKKLDIFGTVQNVEDYVDIYAQGDEEKIKSFINKVIAGASPASSVSDYSIEDLDVTNRYSEFKTIY persistent 91 acylphosphatase UniRef50_Q4L6A9,UniRef90_A0A4Q9WSD6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 295958 296266 . + . GCA_005502385.1_00826_gene GCA_005502385.1_00826 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MWTVAKIRADYEGWWLFSDWTEKIVEQHHYSNYEEMLEDYQSIIKKSKKYYNNYVIGKYNIYAFYNNCDLNFCEDCDEDLQIFYSFIVLNNKEVYYNLPKIN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 295958 296266 . + . GCA_005502385.1_00826_mRNA GCA_005502385.1_00826 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MWTVAKIRADYEGWWLFSDWTEKIVEQHHYSNYEEMLEDYQSIIKKSKKYYNNYVIGKYNIYAFYNNCDLNFCEDCDEDLQIFYSFIVLNNKEVYYNLPKIN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 295958 296266 . + 0 GCA_005502385.1_00826 GCA_005502385.1_00826_gene,GCA_005502385.1_00826_mRNA GCA_005502385.1_00826 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MWTVAKIRADYEGWWLFSDWTEKIVEQHHYSNYEEMLEDYQSIIKKSKKYYNNYVIGKYNIYAFYNNCDLNFCEDCDEDLQIFYSFIVLNNKEVYYNLPKIN persistent 102 msaA regulatory protein MsaA WP_017176340.1 UPI0003157C9F UniRef100_A0A4Q9WTA7,UniRef50_Q2FYN0,UniRef90_A0AAE5JMU8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 296472 296672 . + . GCA_005502385.1_00827_gene GCA_005502385.1_00827 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKQGTVKWFNAEKGFGFIEVEGENDVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQAANVVKL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 296472 296672 . + . GCA_005502385.1_00827_mRNA GCA_005502385.1_00827 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKQGTVKWFNAEKGFGFIEVEGENDVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQAANVVKL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 296472 296672 . + 0 GCA_005502385.1_00827 GCA_005502385.1_00827_gene,GCA_005502385.1_00827_mRNA GCA_005502385.1_00827 Cold shock protein CspA GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKQGTVKWFNAEKGFGFIEVEGENDVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQAANVVKL persistent 66 cspA cold shock protein CspA GO:0003676,GO:0005737 COG1278,K WP_001831260.1 UPI00000E5289 UniRef100_Q5HPE0,UniRef50_P42016,UniRef90_Q2FYN2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 296858 298123 . - . GCA_005502385.1_00828_gene GCA_005502385.1_00828 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSVKYNDYGELTMAGTSLKTLAQSFGTPTIVYDEDEIRNQMRRFHNAFQKSGLKYNISYASKAFTCIQMVKLVQEENLQLDVVSEGELYTALEAKFDPSRIHFHGNNKTKREIQYALESGVGYFVIDSLEEIELIDRYASDRVNVVIRVNPGVEAHTHEFIQTGQEDSKFGLSIRHGLAIQAVEKVEASKHLHLKGIHFHVGSQIEGTEAMIETAKIVLNWLNEHHIQVELLNLGGGFGIKYVEGDVSFPIEEGIAEITDAIKSESEKLNYDVPEIGIEPGRSIVGEAGITLYEVGTIKDIPEVNKYVSIDGGMSDHIRTALYGAKYQALLVNRHEKADETVTIAGKLCESGDIIIRDAMLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIINDTK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 296858 298123 . - . GCA_005502385.1_00828_mRNA GCA_005502385.1_00828 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSVKYNDYGELTMAGTSLKTLAQSFGTPTIVYDEDEIRNQMRRFHNAFQKSGLKYNISYASKAFTCIQMVKLVQEENLQLDVVSEGELYTALEAKFDPSRIHFHGNNKTKREIQYALESGVGYFVIDSLEEIELIDRYASDRVNVVIRVNPGVEAHTHEFIQTGQEDSKFGLSIRHGLAIQAVEKVEASKHLHLKGIHFHVGSQIEGTEAMIETAKIVLNWLNEHHIQVELLNLGGGFGIKYVEGDVSFPIEEGIAEITDAIKSESEKLNYDVPEIGIEPGRSIVGEAGITLYEVGTIKDIPEVNKYVSIDGGMSDHIRTALYGAKYQALLVNRHEKADETVTIAGKLCESGDIIIRDAMLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIINDTK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 296858 298123 . - 0 GCA_005502385.1_00828 GCA_005502385.1_00828_gene,GCA_005502385.1_00828_mRNA GCA_005502385.1_00828 Diaminopimelate decarboxylase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSVKYNDYGELTMAGTSLKTLAQSFGTPTIVYDEDEIRNQMRRFHNAFQKSGLKYNISYASKAFTCIQMVKLVQEENLQLDVVSEGELYTALEAKFDPSRIHFHGNNKTKREIQYALESGVGYFVIDSLEEIELIDRYASDRVNVVIRVNPGVEAHTHEFIQTGQEDSKFGLSIRHGLAIQAVEKVEASKHLHLKGIHFHVGSQIEGTEAMIETAKIVLNWLNEHHIQVELLNLGGGFGIKYVEGDVSFPIEEGIAEITDAIKSESEKLNYDVPEIGIEPGRSIVGEAGITLYEVGTIKDIPEVNKYVSIDGGMSDHIRTALYGAKYQALLVNRHEKADETVTIAGKLCESGDIIIRDAMLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIINDTK persistent 421 lysA diaminopimelate decarboxylase 4.1.1.20 GO:0008836,GO:0009089 COG0019,E WP_017174711.1 UPI00030A3ACD UniRef100_A0A8X8GKA6,UniRef50_A0A640MVN4,UniRef90_A0A640MVN4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 298125 299198 . - . GCA_005502385.1_00829_gene GCA_005502385.1_00829 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTAVWSVDSKIFLRNATKVKNNQSIMAVVKNNAYHYGLEFAVRTFLEAGIHTFSTTSLKEAVRVRKLAPHATIFLMNAVYDFDTVRNNNIQMTLPSLEYYYQYKSELKDINVHLEFENLLHRSGFKNLDEIKEVLHHHENDNGSEMNIVGLWTHFGYADEFDVPEYGIEREAWLNVVNTLLNEGYQFELIHAQNSASYYREGQQLLTYHTHARVGIALYGSRPYSKLDEHEIEQALTVKGNVIQVREVNKGDYCGYSFAFEATHDHTHLAVVDIGYGDGILKKRATHEALINGKRYPIRALMMSHMFVEVDDDVHAQDEVILYNNDIRIDEYTFKGVGANSEQLSAMNHDSLIKEFR . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 298125 299198 . - . GCA_005502385.1_00829_mRNA GCA_005502385.1_00829 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTAVWSVDSKIFLRNATKVKNNQSIMAVVKNNAYHYGLEFAVRTFLEAGIHTFSTTSLKEAVRVRKLAPHATIFLMNAVYDFDTVRNNNIQMTLPSLEYYYQYKSELKDINVHLEFENLLHRSGFKNLDEIKEVLHHHENDNGSEMNIVGLWTHFGYADEFDVPEYGIEREAWLNVVNTLLNEGYQFELIHAQNSASYYREGQQLLTYHTHARVGIALYGSRPYSKLDEHEIEQALTVKGNVIQVREVNKGDYCGYSFAFEATHDHTHLAVVDIGYGDGILKKRATHEALINGKRYPIRALMMSHMFVEVDDDVHAQDEVILYNNDIRIDEYTFKGVGANSEQLSAMNHDSLIKEFR . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 298125 299198 . - 0 GCA_005502385.1_00829 GCA_005502385.1_00829_gene,GCA_005502385.1_00829_mRNA GCA_005502385.1_00829 Alanine racemase 1 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTAVWSVDSKIFLRNATKVKNNQSIMAVVKNNAYHYGLEFAVRTFLEAGIHTFSTTSLKEAVRVRKLAPHATIFLMNAVYDFDTVRNNNIQMTLPSLEYYYQYKSELKDINVHLEFENLLHRSGFKNLDEIKEVLHHHENDNGSEMNIVGLWTHFGYADEFDVPEYGIEREAWLNVVNTLLNEGYQFELIHAQNSASYYREGQQLLTYHTHARVGIALYGSRPYSKLDEHEIEQALTVKGNVIQVREVNKGDYCGYSFAFEATHDHTHLAVVDIGYGDGILKKRATHEALINGKRYPIRALMMSHMFVEVDDDVHAQDEVILYNNDIRIDEYTFKGVGANSEQLSAMNHDSLIKEFR persistent 357 Alanine racemase 5.1.1.1 UniRef50_Q9EZ08,UniRef90_A0A4Q9WVD5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 299205 300356 . - . GCA_005502385.1_00830_gene GCA_005502385.1_00830 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSELEFVTQHRRHLHQHPELSLHEFETTQYITRFLDELNVSYEQPLETGAIAYLEGNSDHTIAFRADIDALPIFEENNVDYRSQTDNVMHACGHDGHTTALMLFVKRCKAMADQHQLPHNVVFIFQPAEETGGGANRLIKAGAFNQYPIEAVFGIHVNPFADEGQVVIRDEEITASATEYRFFLKGLSSHVADKEQGHSCGEALIHVLNQVGQIQQYHLNGLKRNIVHMGHFNAGEAINTVPSNGYLEGTIRTYDATDLNIVKNQMNKIAKSVKLLFNVDCEVKFEEGYPATMNSPKLRHIVEQSILSANLKVIEKPLPFLFGEDFSFYGQQLAPSYFAFVGTRNEDKGFITGLHTSHLNFDEKVLIDVANYYEQILNHYGKE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 299205 300356 . - . GCA_005502385.1_00830_mRNA GCA_005502385.1_00830 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSELEFVTQHRRHLHQHPELSLHEFETTQYITRFLDELNVSYEQPLETGAIAYLEGNSDHTIAFRADIDALPIFEENNVDYRSQTDNVMHACGHDGHTTALMLFVKRCKAMADQHQLPHNVVFIFQPAEETGGGANRLIKAGAFNQYPIEAVFGIHVNPFADEGQVVIRDEEITASATEYRFFLKGLSSHVADKEQGHSCGEALIHVLNQVGQIQQYHLNGLKRNIVHMGHFNAGEAINTVPSNGYLEGTIRTYDATDLNIVKNQMNKIAKSVKLLFNVDCEVKFEEGYPATMNSPKLRHIVEQSILSANLKVIEKPLPFLFGEDFSFYGQQLAPSYFAFVGTRNEDKGFITGLHTSHLNFDEKVLIDVANYYEQILNHYGKE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 299205 300356 . - 0 GCA_005502385.1_00830 GCA_005502385.1_00830_gene,GCA_005502385.1_00830_mRNA GCA_005502385.1_00830 N-acetylcysteine deacetylase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSELEFVTQHRRHLHQHPELSLHEFETTQYITRFLDELNVSYEQPLETGAIAYLEGNSDHTIAFRADIDALPIFEENNVDYRSQTDNVMHACGHDGHTTALMLFVKRCKAMADQHQLPHNVVFIFQPAEETGGGANRLIKAGAFNQYPIEAVFGIHVNPFADEGQVVIRDEEITASATEYRFFLKGLSSHVADKEQGHSCGEALIHVLNQVGQIQQYHLNGLKRNIVHMGHFNAGEAINTVPSNGYLEGTIRTYDATDLNIVKNQMNKIAKSVKLLFNVDCEVKFEEGYPATMNSPKLRHIVEQSILSANLKVIEKPLPFLFGEDFSFYGQQLAPSYFAFVGTRNEDKGFITGLHTSHLNFDEKVLIDVANYYEQILNHYGKE persistent 383 Hydrolase WP_019835541.1 UPI00037580D9 UniRef100_A0A3S7GW64,UniRef50_Q2FYN6,UniRef90_A0A3S7GW64 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 300465 301184 . - . GCA_005502385.1_00831_gene GCA_005502385.1_00831 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVQHLSAQEIIQYISDAKKSTPLKVYVNGQFNDVTFPNTFKVFGSDDSKVIFCEADDWKTFYETNQSYITDLEIEMDRRNSAIPLKDLTNTNARIEPGSFIREQAIIEDGAVVMMGATINIGAVVGEGTMIDMNATLGGRATTGKNVHVGAGAVLAGVIEPPSASPVVIEDNVLIGANAVILEGVRVGEGAIVAAGAIVTQDVPAGAVVAGTPAKVIKQTSEVQDSKREIVAALRKLND . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 300465 301184 . - . GCA_005502385.1_00831_mRNA GCA_005502385.1_00831 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVQHLSAQEIIQYISDAKKSTPLKVYVNGQFNDVTFPNTFKVFGSDDSKVIFCEADDWKTFYETNQSYITDLEIEMDRRNSAIPLKDLTNTNARIEPGSFIREQAIIEDGAVVMMGATINIGAVVGEGTMIDMNATLGGRATTGKNVHVGAGAVLAGVIEPPSASPVVIEDNVLIGANAVILEGVRVGEGAIVAAGAIVTQDVPAGAVVAGTPAKVIKQTSEVQDSKREIVAALRKLND . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 300465 301184 . - 0 GCA_005502385.1_00831 GCA_005502385.1_00831_gene,GCA_005502385.1_00831_mRNA GCA_005502385.1_00831 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVQHLSAQEIIQYISDAKKSTPLKVYVNGQFNDVTFPNTFKVFGSDDSKVIFCEADDWKTFYETNQSYITDLEIEMDRRNSAIPLKDLTNTNARIEPGSFIREQAIIEDGAVVMMGATINIGAVVGEGTMIDMNATLGGRATTGKNVHVGAGAVLAGVIEPPSASPVVIEDNVLIGANAVILEGVRVGEGAIVAAGAIVTQDVPAGAVVAGTPAKVIKQTSEVQDSKREIVAALRKLND persistent 239 dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 2.3.1.89 GO:0009089,GO:0019877,GO:0047200 COG2171,E WP_019835540.1 UPI000382F32F UniRef100_A0A8X8KJG8,UniRef50_A8F8L8,UniRef90_Q4L6A2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 301209 301934 . - . GCA_005502385.1_00832_gene GCA_005502385.1_00832 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKILLIGYGTMNQRVARLAEEKGHEIVGTIEPEEHQHSPYKAYHHIADAQNEADVAIDFSNPNLLLPLLDEEFELPLVIATTGEKEKLIQKLEQLSERMPVFFSANMSYGVHALTKILEAAVPLLQDYDIELTEAHHNKKVDAPSGTLVKLYDVIKELRENVTPVYDRHERTEKREKDEVGIHSVRGGTIVGEHDVLFAGTDETITISHKAQSKDIFANGAITAAEKLNTKSNGFYTFDNL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 301209 301934 . - . GCA_005502385.1_00832_mRNA GCA_005502385.1_00832 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKILLIGYGTMNQRVARLAEEKGHEIVGTIEPEEHQHSPYKAYHHIADAQNEADVAIDFSNPNLLLPLLDEEFELPLVIATTGEKEKLIQKLEQLSERMPVFFSANMSYGVHALTKILEAAVPLLQDYDIELTEAHHNKKVDAPSGTLVKLYDVIKELRENVTPVYDRHERTEKREKDEVGIHSVRGGTIVGEHDVLFAGTDETITISHKAQSKDIFANGAITAAEKLNTKSNGFYTFDNL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 301209 301934 . - 0 GCA_005502385.1_00832 GCA_005502385.1_00832_gene,GCA_005502385.1_00832_mRNA GCA_005502385.1_00832 4-hydroxy-tetrahydrodipicolinate reductase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKILLIGYGTMNQRVARLAEEKGHEIVGTIEPEEHQHSPYKAYHHIADAQNEADVAIDFSNPNLLLPLLDEEFELPLVIATTGEKEKLIQKLEQLSERMPVFFSANMSYGVHALTKILEAAVPLLQDYDIELTEAHHNKKVDAPSGTLVKLYDVIKELRENVTPVYDRHERTEKREKDEVGIHSVRGGTIVGEHDVLFAGTDETITISHKAQSKDIFANGAITAAEKLNTKSNGFYTFDNL persistent 241 dapB 4-hydroxy-tetrahydrodipicolinate reductase 1.17.1.8 GO:0008839,GO:0009089 WP_017174707.1 UPI0002D8CA55 UniRef100_A0A8X8KLC2,UniRef50_Q9EZ11,UniRef90_A0A8X8KLC2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 301937 302818 . - . GCA_005502385.1_00833_gene GCA_005502385.1_00833 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAHIFEGVGVALATPFTNNEVDYKALERHVQFLLDNNVKAIIVNGTTAESPTLTEEEKEKVLQAVIKQVNHQVAIIAGTGTNNTAKSIQASLRAKELGVDGIMLITPYYNKTNQRGLIKHFETIANEVKLPVVLYNVPSRTNMTIDPETVETLSHNDYIVAIKDATNDFNYYEEVKKRIHQDEFAFYSGNDDNVVEFYNRGGNGVISVIANVIPKEFQALYDAKQNGKEIEKDFEPIGQLLDALSVDVNPIPIKALTSHLGFGNYELRLPLLPLEKEKANVLVNAYKAFKTEE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 301937 302818 . - . GCA_005502385.1_00833_mRNA GCA_005502385.1_00833 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAHIFEGVGVALATPFTNNEVDYKALERHVQFLLDNNVKAIIVNGTTAESPTLTEEEKEKVLQAVIKQVNHQVAIIAGTGTNNTAKSIQASLRAKELGVDGIMLITPYYNKTNQRGLIKHFETIANEVKLPVVLYNVPSRTNMTIDPETVETLSHNDYIVAIKDATNDFNYYEEVKKRIHQDEFAFYSGNDDNVVEFYNRGGNGVISVIANVIPKEFQALYDAKQNGKEIEKDFEPIGQLLDALSVDVNPIPIKALTSHLGFGNYELRLPLLPLEKEKANVLVNAYKAFKTEE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 301937 302818 . - 0 GCA_005502385.1_00833 GCA_005502385.1_00833_gene,GCA_005502385.1_00833_mRNA GCA_005502385.1_00833 4-hydroxy-tetrahydrodipicolinate synthase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAHIFEGVGVALATPFTNNEVDYKALERHVQFLLDNNVKAIIVNGTTAESPTLTEEEKEKVLQAVIKQVNHQVAIIAGTGTNNTAKSIQASLRAKELGVDGIMLITPYYNKTNQRGLIKHFETIANEVKLPVVLYNVPSRTNMTIDPETVETLSHNDYIVAIKDATNDFNYYEEVKKRIHQDEFAFYSGNDDNVVEFYNRGGNGVISVIANVIPKEFQALYDAKQNGKEIEKDFEPIGQLLDALSVDVNPIPIKALTSHLGFGNYELRLPLLPLEKEKANVLVNAYKAFKTEE persistent 293 dapA 4-hydroxy-tetrahydrodipicolinate synthase 4.3.3.7 GO:0008840,GO:0009089 WP_017174706.1 UPI0002D7C828 UniRef100_A0A3S7GSS2,UniRef50_Q6GH13,UniRef90_A0A4Q9WS77 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 302820 303809 . - . GCA_005502385.1_00834_gene GCA_005502385.1_00834 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTRLAVVGATGLVGTKMLETIDRKHIQFDELVLFSSARSAGKEIEFQGKTYTVQELTEEAASEKFDYVLMSAGGGTSKQFAPIFEKAGAIVIDNSSQWRMTNDVDLIVPEVNQPEFKRGIIANPNCSTIQSVVPLKVLYDAFGLKRVAYTTYQAVSGSGVKGKRDLAEGANGKAPEAYPHPIYNNVLPHIDVFLEDGYTKEEQKMIDETRKILGQPDLRVTATCARVPVQDSHSVEIDVTLDKEATVQEIKDLFENDNRVVLVDNPENNEYPLAINSTGKDEVFVGRIRRDDSLDNTFHVWCTSDNLLKGAALNAVQVLEQVIKLKGAR . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 302820 303809 . - . GCA_005502385.1_00834_mRNA GCA_005502385.1_00834 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTRLAVVGATGLVGTKMLETIDRKHIQFDELVLFSSARSAGKEIEFQGKTYTVQELTEEAASEKFDYVLMSAGGGTSKQFAPIFEKAGAIVIDNSSQWRMTNDVDLIVPEVNQPEFKRGIIANPNCSTIQSVVPLKVLYDAFGLKRVAYTTYQAVSGSGVKGKRDLAEGANGKAPEAYPHPIYNNVLPHIDVFLEDGYTKEEQKMIDETRKILGQPDLRVTATCARVPVQDSHSVEIDVTLDKEATVQEIKDLFENDNRVVLVDNPENNEYPLAINSTGKDEVFVGRIRRDDSLDNTFHVWCTSDNLLKGAALNAVQVLEQVIKLKGAR . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 302820 303809 . - 0 GCA_005502385.1_00834 GCA_005502385.1_00834_gene,GCA_005502385.1_00834_mRNA GCA_005502385.1_00834 Aspartate-semialdehyde dehydrogenase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTRLAVVGATGLVGTKMLETIDRKHIQFDELVLFSSARSAGKEIEFQGKTYTVQELTEEAASEKFDYVLMSAGGGTSKQFAPIFEKAGAIVIDNSSQWRMTNDVDLIVPEVNQPEFKRGIIANPNCSTIQSVVPLKVLYDAFGLKRVAYTTYQAVSGSGVKGKRDLAEGANGKAPEAYPHPIYNNVLPHIDVFLEDGYTKEEQKMIDETRKILGQPDLRVTATCARVPVQDSHSVEIDVTLDKEATVQEIKDLFENDNRVVLVDNPENNEYPLAINSTGKDEVFVGRIRRDDSLDNTFHVWCTSDNLLKGAALNAVQVLEQVIKLKGAR persistent 329 asd aspartate-semialdehyde dehydrogenase 1.2.1.11 GO:0004073,GO:0008652,GO:0016620,GO:0051287 COG0136,E WP_017174705.1 UPI0002D352EE UniRef100_A0A4Q9WUD4,UniRef50_A0A2T4PUK5,UniRef90_A0A640MW60 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 303869 305071 . - . GCA_005502385.1_00835_gene GCA_005502385.1_00835 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKRRVLKFGGSSVADFTKIKNIAEMLKRRVDDGEQLIVVVSAMGKTTDQLMENVSHLTTTPKDEELALLLTTGEQQTVSYLSMVLNDIGVSARAMTGYQAGIKTVGHHLKSRIAEINPETFNKEFKDKDVLVVAGFQGVNDELELTTLGRGGSDTTAVALAASNQIPCEIYTDVDGVYATDPRILSEAKRLDYVSYEEMMEMSALGAGVLETRSVELAKNYDIPLYLGRTLSNVKGTWIMPRTEILEKKAVTGVALDTHMMHVTISYPLPDNRLLTQLFTALDEGSVNVDMISQIVNVEGLQLSFSIKDSDVQQISSILEELSTTFDALDYKINEAYVKISLIGSGMRDMSGVASKAFITLINSNIPFYQTTTSEISISYVIDAENGNKAVEVLYDAFDI . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 303869 305071 . - . GCA_005502385.1_00835_mRNA GCA_005502385.1_00835 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKRRVLKFGGSSVADFTKIKNIAEMLKRRVDDGEQLIVVVSAMGKTTDQLMENVSHLTTTPKDEELALLLTTGEQQTVSYLSMVLNDIGVSARAMTGYQAGIKTVGHHLKSRIAEINPETFNKEFKDKDVLVVAGFQGVNDELELTTLGRGGSDTTAVALAASNQIPCEIYTDVDGVYATDPRILSEAKRLDYVSYEEMMEMSALGAGVLETRSVELAKNYDIPLYLGRTLSNVKGTWIMPRTEILEKKAVTGVALDTHMMHVTISYPLPDNRLLTQLFTALDEGSVNVDMISQIVNVEGLQLSFSIKDSDVQQISSILEELSTTFDALDYKINEAYVKISLIGSGMRDMSGVASKAFITLINSNIPFYQTTTSEISISYVIDAENGNKAVEVLYDAFDI . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 303869 305071 . - 0 GCA_005502385.1_00835 GCA_005502385.1_00835_gene,GCA_005502385.1_00835_mRNA GCA_005502385.1_00835 Aspartokinase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKRRVLKFGGSSVADFTKIKNIAEMLKRRVDDGEQLIVVVSAMGKTTDQLMENVSHLTTTPKDEELALLLTTGEQQTVSYLSMVLNDIGVSARAMTGYQAGIKTVGHHLKSRIAEINPETFNKEFKDKDVLVVAGFQGVNDELELTTLGRGGSDTTAVALAASNQIPCEIYTDVDGVYATDPRILSEAKRLDYVSYEEMMEMSALGAGVLETRSVELAKNYDIPLYLGRTLSNVKGTWIMPRTEILEKKAVTGVALDTHMMHVTISYPLPDNRLLTQLFTALDEGSVNVDMISQIVNVEGLQLSFSIKDSDVQQISSILEELSTTFDALDYKINEAYVKISLIGSGMRDMSGVASKAFITLINSNIPFYQTTTSEISISYVIDAENGNKAVEVLYDAFDI persistent 400 metL1 aspartate kinase 2.7.2.4 COG0527,E UniRef50_B9EBZ4,UniRef90_Q4L698 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 305152 305327 . - . GCA_005502385.1_00836_gene GCA_005502385.1_00836 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 305152 305327 . - . GCA_005502385.1_00836_mRNA GCA_005502385.1_00836 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 Infernal:001001 misc_RNA 305152 305327 96.2 - . GCA_005502385.1_00836 GCA_005502385.1_00836_gene,GCA_005502385.1_00836_mRNA GCA_005502385.1_00836 Lysine GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 305600 307204 . - . GCA_005502385.1_00837_gene GCA_005502385.1_00837 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLQVTDVSLRFGDRKLFEDVNIKFTEGNCYGLIGANGAGKSTFLKILSGEIDSQTGHVSLGKDERLAVLKQDHFAYEDERVLDVVIKGHERLFEVMKEKDEIYMKPDFSDEDGIRAAELEGEFAEMNGWNAEADAASLLSGLGITPDLHDKQMSELENNQKVKVLLAQSLFGDPDVLLLDEPTNGLDIPAISWLEDFLINFENTVIVVSHDRHFLNNVCTHIADLDFGKIKVYVGNYDFWYQSSQLAQKMAQEQNKKKEEKIKELQDFIARFSANASKSKQATSRKKQLEKIELDDIQPSSRRYPYVKFTPEREIGNDLLVVDGISKTIEGEKVLDNISFTMNPNDKAILIGDSEIAKTTLLKILAGEMEPDEGSFKWGVTTSLSYFPKDNSDFFEGVDMNLVEWLRQYAPEDEQTETFLRGFLGRMLFSGEEVKKKASVLSGGEKVRCMLSKMMLSSANVLLLDEPTNHLDLESITAVNDGLASFKGSIIFTSYDFEFINTIANRVIDLNQPGSLSKELPYEEYLKEIGVLQN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 305600 307204 . - . GCA_005502385.1_00837_mRNA GCA_005502385.1_00837 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLQVTDVSLRFGDRKLFEDVNIKFTEGNCYGLIGANGAGKSTFLKILSGEIDSQTGHVSLGKDERLAVLKQDHFAYEDERVLDVVIKGHERLFEVMKEKDEIYMKPDFSDEDGIRAAELEGEFAEMNGWNAEADAASLLSGLGITPDLHDKQMSELENNQKVKVLLAQSLFGDPDVLLLDEPTNGLDIPAISWLEDFLINFENTVIVVSHDRHFLNNVCTHIADLDFGKIKVYVGNYDFWYQSSQLAQKMAQEQNKKKEEKIKELQDFIARFSANASKSKQATSRKKQLEKIELDDIQPSSRRYPYVKFTPEREIGNDLLVVDGISKTIEGEKVLDNISFTMNPNDKAILIGDSEIAKTTLLKILAGEMEPDEGSFKWGVTTSLSYFPKDNSDFFEGVDMNLVEWLRQYAPEDEQTETFLRGFLGRMLFSGEEVKKKASVLSGGEKVRCMLSKMMLSSANVLLLDEPTNHLDLESITAVNDGLASFKGSIIFTSYDFEFINTIANRVIDLNQPGSLSKELPYEEYLKEIGVLQN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 305600 307204 . - 0 GCA_005502385.1_00837 GCA_005502385.1_00837_gene,GCA_005502385.1_00837_mRNA GCA_005502385.1_00837 putative ABC transporter ATP-binding protein YbiT GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLQVTDVSLRFGDRKLFEDVNIKFTEGNCYGLIGANGAGKSTFLKILSGEIDSQTGHVSLGKDERLAVLKQDHFAYEDERVLDVVIKGHERLFEVMKEKDEIYMKPDFSDEDGIRAAELEGEFAEMNGWNAEADAASLLSGLGITPDLHDKQMSELENNQKVKVLLAQSLFGDPDVLLLDEPTNGLDIPAISWLEDFLINFENTVIVVSHDRHFLNNVCTHIADLDFGKIKVYVGNYDFWYQSSQLAQKMAQEQNKKKEEKIKELQDFIARFSANASKSKQATSRKKQLEKIELDDIQPSSRRYPYVKFTPEREIGNDLLVVDGISKTIEGEKVLDNISFTMNPNDKAILIGDSEIAKTTLLKILAGEMEPDEGSFKWGVTTSLSYFPKDNSDFFEGVDMNLVEWLRQYAPEDEQTETFLRGFLGRMLFSGEEVKKKASVLSGGEKVRCMLSKMMLSSANVLLLDEPTNHLDLESITAVNDGLASFKGSIIFTSYDFEFINTIANRVIDLNQPGSLSKELPYEEYLKEIGVLQN persistent 534 uup ABC transporter domain-containing protein COG0488,R WP_017174704.1 UPI0002FC4FDC UniRef100_A0A8X8GQH6,UniRef50_R5Y8E8,UniRef90_S2YJP1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 307353 308249 . + . GCA_005502385.1_00838_gene GCA_005502385.1_00838 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MALDKDIVGSIEFLEVLGLEGSTYLLKGPNGEQVKLNQSEINEEDEFEIGEEYSFFIYPNRSGELFATQNMPDITKDKYDFAKVLKTDRDGARVDVGLPREVLIPWEDLPKVKSLWPQSGDYVLVTLRIDRNHQMFARLASETIVEKMFTPVSNDDMQNQVLKARPYRLLRIGTFLLTEDGYKVFVHESERKHEPRLGEAVEVRIIGHNEKGELNGSFLPLAHERLDEDGQVIFDLLVEYDGELPFWDKSSPEAIKEVFNMSKGSFKRAIGHLYKRKIINIETGKITLTKKGKSLIQE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 307353 308249 . + . GCA_005502385.1_00838_mRNA GCA_005502385.1_00838 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MALDKDIVGSIEFLEVLGLEGSTYLLKGPNGEQVKLNQSEINEEDEFEIGEEYSFFIYPNRSGELFATQNMPDITKDKYDFAKVLKTDRDGARVDVGLPREVLIPWEDLPKVKSLWPQSGDYVLVTLRIDRNHQMFARLASETIVEKMFTPVSNDDMQNQVLKARPYRLLRIGTFLLTEDGYKVFVHESERKHEPRLGEAVEVRIIGHNEKGELNGSFLPLAHERLDEDGQVIFDLLVEYDGELPFWDKSSPEAIKEVFNMSKGSFKRAIGHLYKRKIINIETGKITLTKKGKSLIQE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 307353 308249 . + 0 GCA_005502385.1_00838 GCA_005502385.1_00838_gene,GCA_005502385.1_00838_mRNA GCA_005502385.1_00838 Conserved virulence factor B GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MALDKDIVGSIEFLEVLGLEGSTYLLKGPNGEQVKLNQSEINEEDEFEIGEEYSFFIYPNRSGELFATQNMPDITKDKYDFAKVLKTDRDGARVDVGLPREVLIPWEDLPKVKSLWPQSGDYVLVTLRIDRNHQMFARLASETIVEKMFTPVSNDDMQNQVLKARPYRLLRIGTFLLTEDGYKVFVHESERKHEPRLGEAVEVRIIGHNEKGELNGSFLPLAHERLDEDGQVIFDLLVEYDGELPFWDKSSPEAIKEVFNMSKGSFKRAIGHLYKRKIINIETGKITLTKKGKSLIQE persistent 298 cvfB RNA-binding virulence regulatory protein CvfB WP_017174703.1 UPI0002F228C5 UniRef100_A0A8X8GMP6,UniRef50_Q2FYP3,UniRef90_A0A380G176 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 308483 309433 . + . GCA_005502385.1_00839_gene GCA_005502385.1_00839 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKWQLVGTTVLGATVLLGACGGGNSGGSGSGDGKDLKGSAKGEGSSTVAPIVEKLNEKWSKDHPSATISSGQAGTGAGFEKFIAGETDFSQASRPIKDEEKQKLEDKNIKYKEFKIAQDGVTVAVNKDNDFVKELSKDQLKKIYSGEAKTWKDVDSSWPNKEIKAFSPNSSHGTYDFWEEEVMDKQDIKAQKNGDTNVIVQSVEKNKESIGYFGYNFYKQNKDKLKEVKIKGDDGKSVEPTKKTIQDGSYPLSRPLFLYVKEKSLEDNDVMREFLKFTLDDKGKSAEDAGYVASPSKVYKDEIKELDKYKKDSDK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 308483 309433 . + . GCA_005502385.1_00839_mRNA GCA_005502385.1_00839 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKWQLVGTTVLGATVLLGACGGGNSGGSGSGDGKDLKGSAKGEGSSTVAPIVEKLNEKWSKDHPSATISSGQAGTGAGFEKFIAGETDFSQASRPIKDEEKQKLEDKNIKYKEFKIAQDGVTVAVNKDNDFVKELSKDQLKKIYSGEAKTWKDVDSSWPNKEIKAFSPNSSHGTYDFWEEEVMDKQDIKAQKNGDTNVIVQSVEKNKESIGYFGYNFYKQNKDKLKEVKIKGDDGKSVEPTKKTIQDGSYPLSRPLFLYVKEKSLEDNDVMREFLKFTLDDKGKSAEDAGYVASPSKVYKDEIKELDKYKKDSDK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 308483 309433 . + 0 GCA_005502385.1_00839 GCA_005502385.1_00839_gene,GCA_005502385.1_00839_mRNA GCA_005502385.1_00839 Phosphate-binding protein PstS GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKWQLVGTTVLGATVLLGACGGGNSGGSGSGDGKDLKGSAKGEGSSTVAPIVEKLNEKWSKDHPSATISSGQAGTGAGFEKFIAGETDFSQASRPIKDEEKQKLEDKNIKYKEFKIAQDGVTVAVNKDNDFVKELSKDQLKKIYSGEAKTWKDVDSSWPNKEIKAFSPNSSHGTYDFWEEEVMDKQDIKAQKNGDTNVIVQSVEKNKESIGYFGYNFYKQNKDKLKEVKIKGDDGKSVEPTKKTIQDGSYPLSRPLFLYVKEKSLEDNDVMREFLKFTLDDKGKSAEDAGYVASPSKVYKDEIKELDKYKKDSDK persistent 316 pstS Phosphate-binding protein PstS GO:0005886,GO:0006817,GO:0042301 COG0226,P WP_017174702.1 UPI0002D49387 UniRef100_A0A4Q9WS76,UniRef50_Q49XJ1,UniRef90_Q4L694 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 309621 310547 . + . GCA_005502385.1_00840_gene GCA_005502385.1_00840 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MASNTNVREMIAKNNAKKGGFSDKIVPIILGIIAAISILTTIGILFTLITETITFFTRVSITEFLFTKDWNPTSSDPKYGIWALILGTLKITFIGTLVAVPIGLGAAIYLSEYASDKARRIIKPILEILAGIPTIVFGFFALTFVTPLLRTFIPQLDSFNSISPGIVVGIMIVPIITSMSEDAMASVPNKMREGAFGLGSTKFEVATKVVLPAAASGVIASIVLGISRAIGETMIVSLAAGSSPTSSLTLTSSIQTMTGYIVEIATGDATFGSDIYYSIYAVGFTLFIFTLIMNLISYWISKRYREEY . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 309621 310547 . + . GCA_005502385.1_00840_mRNA GCA_005502385.1_00840 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MASNTNVREMIAKNNAKKGGFSDKIVPIILGIIAAISILTTIGILFTLITETITFFTRVSITEFLFTKDWNPTSSDPKYGIWALILGTLKITFIGTLVAVPIGLGAAIYLSEYASDKARRIIKPILEILAGIPTIVFGFFALTFVTPLLRTFIPQLDSFNSISPGIVVGIMIVPIITSMSEDAMASVPNKMREGAFGLGSTKFEVATKVVLPAAASGVIASIVLGISRAIGETMIVSLAAGSSPTSSLTLTSSIQTMTGYIVEIATGDATFGSDIYYSIYAVGFTLFIFTLIMNLISYWISKRYREEY . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 309621 310547 . + 0 GCA_005502385.1_00840 GCA_005502385.1_00840_gene,GCA_005502385.1_00840_mRNA GCA_005502385.1_00840 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MASNTNVREMIAKNNAKKGGFSDKIVPIILGIIAAISILTTIGILFTLITETITFFTRVSITEFLFTKDWNPTSSDPKYGIWALILGTLKITFIGTLVAVPIGLGAAIYLSEYASDKARRIIKPILEILAGIPTIVFGFFALTFVTPLLRTFIPQLDSFNSISPGIVVGIMIVPIITSMSEDAMASVPNKMREGAFGLGSTKFEVATKVVLPAAASGVIASIVLGISRAIGETMIVSLAAGSSPTSSLTLTSSIQTMTGYIVEIATGDATFGSDIYYSIYAVGFTLFIFTLIMNLISYWISKRYREEY persistent 308 pstC phosphate ABC transporter permease subunit PstC GO:0005886,GO:0006817,GO:0015415,GO:0055052 COG0573,P WP_017174701.1 UPI0002DBEA2B UniRef100_A0A4Q9WVD7,UniRef50_A0A235FA99,UniRef90_A0A533IWU3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 310549 311469 . + . GCA_005502385.1_00841_gene GCA_005502385.1_00841 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTATTDPRAKGLVDKSKVEKNLSSRDKKNSLNKWLFFACIVFALIVLAALLIQTLVKGVGHLTPEFFTSFSSSTPSQAGIKGALAGTLWLMITIIPISIILGVGTAIYLEEYARDNMFTSFVKICISNLAGVPSIVFGLLGLTLFVRGAGIESLSLGNTVIAAALTMSLLILPIIIVSSQEAIRAVPNSVREASYGLGGNKWQTIRKVVLPAALPGILTGFILSLSRALGETAPLILIGIPTIFLAVPSGLFSMFTALPTQIYTWAKMPQAEFQNVASAGIIVLLVILLLMNGLAIFLRNKFSRKY . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 310549 311469 . + . GCA_005502385.1_00841_mRNA GCA_005502385.1_00841 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTATTDPRAKGLVDKSKVEKNLSSRDKKNSLNKWLFFACIVFALIVLAALLIQTLVKGVGHLTPEFFTSFSSSTPSQAGIKGALAGTLWLMITIIPISIILGVGTAIYLEEYARDNMFTSFVKICISNLAGVPSIVFGLLGLTLFVRGAGIESLSLGNTVIAAALTMSLLILPIIIVSSQEAIRAVPNSVREASYGLGGNKWQTIRKVVLPAALPGILTGFILSLSRALGETAPLILIGIPTIFLAVPSGLFSMFTALPTQIYTWAKMPQAEFQNVASAGIIVLLVILLLMNGLAIFLRNKFSRKY . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 310549 311469 . + 0 GCA_005502385.1_00841 GCA_005502385.1_00841_gene,GCA_005502385.1_00841_mRNA GCA_005502385.1_00841 Phosphate transport system permease protein PstA GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTATTDPRAKGLVDKSKVEKNLSSRDKKNSLNKWLFFACIVFALIVLAALLIQTLVKGVGHLTPEFFTSFSSSTPSQAGIKGALAGTLWLMITIIPISIILGVGTAIYLEEYARDNMFTSFVKICISNLAGVPSIVFGLLGLTLFVRGAGIESLSLGNTVIAAALTMSLLILPIIIVSSQEAIRAVPNSVREASYGLGGNKWQTIRKVVLPAALPGILTGFILSLSRALGETAPLILIGIPTIFLAVPSGLFSMFTALPTQIYTWAKMPQAEFQNVASAGIIVLLVILLLMNGLAIFLRNKFSRKY persistent 306 pstA phosphate ABC transporter permease PstA GO:0005886,GO:0006817,GO:0015415,GO:0055052 WP_037541016.1 UPI00044B74CF UniRef100_A0A3S7GW78,UniRef50_B9E6T5,UniRef90_A0A974KW62 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 311547 312473 . + . GCA_005502385.1_00842_gene GCA_005502385.1_00842 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKINVDEKKKNIEQHTNDVVDQHSNHTHPTNDNQSQKTTIVTTNSENKKNIKPDSERKVVYSTQNLDLWYGENHALQNINLDILENNVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTAGKILYREQNIFDNNYSKEKLRTNVGMVFQQPNPFPKSIYDNITYGPKIHGIKDKKLLDEIVEKSLRGAAIWDELKDRLHTNAYGLSGGQQQRVCIARCLAIEPDVILMDEPTSALDPISTLRVEELVQELKENYSIIMVTHNMQQAARVSDKTAFFLNGYVNEYDDTDKIFSNPSDKQTEDYISGRFG . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 311547 312473 . + . GCA_005502385.1_00842_mRNA GCA_005502385.1_00842 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKINVDEKKKNIEQHTNDVVDQHSNHTHPTNDNQSQKTTIVTTNSENKKNIKPDSERKVVYSTQNLDLWYGENHALQNINLDILENNVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTAGKILYREQNIFDNNYSKEKLRTNVGMVFQQPNPFPKSIYDNITYGPKIHGIKDKKLLDEIVEKSLRGAAIWDELKDRLHTNAYGLSGGQQQRVCIARCLAIEPDVILMDEPTSALDPISTLRVEELVQELKENYSIIMVTHNMQQAARVSDKTAFFLNGYVNEYDDTDKIFSNPSDKQTEDYISGRFG . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 311547 312473 . + 0 GCA_005502385.1_00842 GCA_005502385.1_00842_gene,GCA_005502385.1_00842_mRNA GCA_005502385.1_00842 Phosphate import ATP-binding protein PstB 3 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKINVDEKKKNIEQHTNDVVDQHSNHTHPTNDNQSQKTTIVTTNSENKKNIKPDSERKVVYSTQNLDLWYGENHALQNINLDILENNVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTAGKILYREQNIFDNNYSKEKLRTNVGMVFQQPNPFPKSIYDNITYGPKIHGIKDKKLLDEIVEKSLRGAAIWDELKDRLHTNAYGLSGGQQQRVCIARCLAIEPDVILMDEPTSALDPISTLRVEELVQELKENYSIIMVTHNMQQAARVSDKTAFFLNGYVNEYDDTDKIFSNPSDKQTEDYISGRFG persistent 308 pstB phosphate ABC transporter ATP-binding protein PstB 7.3.2.1 GO:0005524,GO:0006817,GO:0009898,GO:0015415,GO:0055052 WP_017174699.1 UPI0002DC9F00 UniRef100_A0A4V2KXD7,UniRef50_Q2FYQ0,UniRef90_A0A4V2KXD7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 312480 313130 . + . GCA_005502385.1_00843_gene GCA_005502385.1_00843 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIIRQKYEGQLDDLIKELRRLGLRVYSNVNNAIESLSEDDRNFARHVIEKDKEINKFDYDINEQVIMLITKQQPIATDLRMMMAALKISTDFERMGDNAANIAHIRLRVKITDHYVLTRLKTMGKLALLMLEDLNTAVKSEDLTLIKEIIERDKDIDDLYVNIVNTTYLIDNDPFVAGQAHLAARNLERVGDHVRNIAESIYYYFTGEHFDKYDR . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 312480 313130 . + . GCA_005502385.1_00843_mRNA GCA_005502385.1_00843 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIIRQKYEGQLDDLIKELRRLGLRVYSNVNNAIESLSEDDRNFARHVIEKDKEINKFDYDINEQVIMLITKQQPIATDLRMMMAALKISTDFERMGDNAANIAHIRLRVKITDHYVLTRLKTMGKLALLMLEDLNTAVKSEDLTLIKEIIERDKDIDDLYVNIVNTTYLIDNDPFVAGQAHLAARNLERVGDHVRNIAESIYYYFTGEHFDKYDR . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 312480 313130 . + 0 GCA_005502385.1_00843 GCA_005502385.1_00843_gene,GCA_005502385.1_00843_mRNA GCA_005502385.1_00843 Phosphate-specific transport system accessory protein PhoU GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIIRQKYEGQLDDLIKELRRLGLRVYSNVNNAIESLSEDDRNFARHVIEKDKEINKFDYDINEQVIMLITKQQPIATDLRMMMAALKISTDFERMGDNAANIAHIRLRVKITDHYVLTRLKTMGKLALLMLEDLNTAVKSEDLTLIKEIIERDKDIDDLYVNIVNTTYLIDNDPFVAGQAHLAARNLERVGDHVRNIAESIYYYFTGEHFDKYDR persistent 216 phoU phosphate signaling complex protein PhoU GO:0006817,GO:0030643,GO:0045936 WP_017174698.1 UPI0002EB1664 UniRef100_A0A4Q9WS78,UniRef50_A0A4R6BXI3,UniRef90_A0A6N0I415 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 313230 315038 . - . GCA_005502385.1_00844_gene GCA_005502385.1_00844 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNTGLPLRKHVPDNEKWNLEDLFTNDEAFYNTLNDVLEKSAQFNQKYKNNLSETKIILDALKEYEDLLIQFDRLGNYAELRLSVDTTNELAQTLNAKLSTSYGKISSLLSFVESEIMILSDDKLKELKEQFNSPHYLEKLIKRKPYQLSSEVEEVLASLSPTFQSAYELYGTTKMLDIAFESFEHNHEMYPLDYATFENEYEDSSDPEFRRKSFEAFSNALRKYQHTTAATYNQHVQQEKIEANLRGYDSVIDFLLQEQEVTREMYDRQIDVIMSDLAPVMQKYAKILQRIHNLDKMRFEDLKISVDPSYEPDISIEDSKQYIHGALGVLGDDYIKMVDNAYNHQWIDFAQNKGKDTGAYCASPYFTHSYVFISWTGKMAETFVLAHELGHAGHFTLSQKHQHLLDSEASMYFVEAPSTMNEMLMANYLFSNSNDARFKRWVIGSIISRTYYHNMVTHLLEAAYQREVYKKVDNGESLTAPVLNKLMRNVYEQFFGDAVELTDGMELTWMRQPHYYMGLYSYTYSAGLTIGTVVSQKIKKEGQKAVDAWLETLKAGGSKNPVELAKVAGVDITTNAPLKSTIAYISELVDEVETLTNEIEHN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 313230 315038 . - . GCA_005502385.1_00844_mRNA GCA_005502385.1_00844 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNTGLPLRKHVPDNEKWNLEDLFTNDEAFYNTLNDVLEKSAQFNQKYKNNLSETKIILDALKEYEDLLIQFDRLGNYAELRLSVDTTNELAQTLNAKLSTSYGKISSLLSFVESEIMILSDDKLKELKEQFNSPHYLEKLIKRKPYQLSSEVEEVLASLSPTFQSAYELYGTTKMLDIAFESFEHNHEMYPLDYATFENEYEDSSDPEFRRKSFEAFSNALRKYQHTTAATYNQHVQQEKIEANLRGYDSVIDFLLQEQEVTREMYDRQIDVIMSDLAPVMQKYAKILQRIHNLDKMRFEDLKISVDPSYEPDISIEDSKQYIHGALGVLGDDYIKMVDNAYNHQWIDFAQNKGKDTGAYCASPYFTHSYVFISWTGKMAETFVLAHELGHAGHFTLSQKHQHLLDSEASMYFVEAPSTMNEMLMANYLFSNSNDARFKRWVIGSIISRTYYHNMVTHLLEAAYQREVYKKVDNGESLTAPVLNKLMRNVYEQFFGDAVELTDGMELTWMRQPHYYMGLYSYTYSAGLTIGTVVSQKIKKEGQKAVDAWLETLKAGGSKNPVELAKVAGVDITTNAPLKSTIAYISELVDEVETLTNEIEHN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 313230 315038 . - 0 GCA_005502385.1_00844 GCA_005502385.1_00844_gene,GCA_005502385.1_00844_mRNA GCA_005502385.1_00844 Oligoendopeptidase F%2C plasmid GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNTGLPLRKHVPDNEKWNLEDLFTNDEAFYNTLNDVLEKSAQFNQKYKNNLSETKIILDALKEYEDLLIQFDRLGNYAELRLSVDTTNELAQTLNAKLSTSYGKISSLLSFVESEIMILSDDKLKELKEQFNSPHYLEKLIKRKPYQLSSEVEEVLASLSPTFQSAYELYGTTKMLDIAFESFEHNHEMYPLDYATFENEYEDSSDPEFRRKSFEAFSNALRKYQHTTAATYNQHVQQEKIEANLRGYDSVIDFLLQEQEVTREMYDRQIDVIMSDLAPVMQKYAKILQRIHNLDKMRFEDLKISVDPSYEPDISIEDSKQYIHGALGVLGDDYIKMVDNAYNHQWIDFAQNKGKDTGAYCASPYFTHSYVFISWTGKMAETFVLAHELGHAGHFTLSQKHQHLLDSEASMYFVEAPSTMNEMLMANYLFSNSNDARFKRWVIGSIISRTYYHNMVTHLLEAAYQREVYKKVDNGESLTAPVLNKLMRNVYEQFFGDAVELTDGMELTWMRQPHYYMGLYSYTYSAGLTIGTVVSQKIKKEGQKAVDAWLETLKAGGSKNPVELAKVAGVDITTNAPLKSTIAYISELVDEVETLTNEIEHN persistent 602 pepF oligoendopeptidase F 3.4.24.- GO:0004222,GO:0006508 WP_070436436.1 UPI0008A2E644 UniRef100_UPI0008A2E644,UniRef50_A0A7X9ZKX9,UniRef90_A0A4Q9WS86 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 315206 315550 . + . GCA_005502385.1_00845_gene GCA_005502385.1_00845 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTIFDMPNYLWITILAMMVLTVFCTLVLKKWLSAAVITFVVLAVLAFFIPNFYNITFQPLLGYAAFLAIISLMISFLLWYFTRGWRRERKEKQLEKEMKKYDNDEYMYRRRDRR . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 315206 315550 . + . GCA_005502385.1_00845_mRNA GCA_005502385.1_00845 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTIFDMPNYLWITILAMMVLTVFCTLVLKKWLSAAVITFVVLAVLAFFIPNFYNITFQPLLGYAAFLAIISLMISFLLWYFTRGWRRERKEKQLEKEMKKYDNDEYMYRRRDRR . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 315206 315550 . + 0 GCA_005502385.1_00845 GCA_005502385.1_00845_gene,GCA_005502385.1_00845_mRNA GCA_005502385.1_00845 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTIFDMPNYLWITILAMMVLTVFCTLVLKKWLSAAVITFVVLAVLAFFIPNFYNITFQPLLGYAAFLAIISLMISFLLWYFTRGWRRERKEKQLEKEMKKYDNDEYMYRRRDRR persistent 114 Permease WP_070436435.1 UPI0008A64237 UniRef100_UPI0008A64237,UniRef50_A0A3A0VJ57,UniRef90_A0AAE5JMV2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 315602 316642 . - . GCA_005502385.1_00846_gene GCA_005502385.1_00846 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQKSFKYILLILSVILILSACDKQSDSNSSSSKDTITVKNTYEFKDKNHTHSRGKNKTETVKVPVNPKRVAVLDYGALDIMQQMGLQDKIVSIAKGQGASFLPSSLSEFKNSKYTNLGNPGRPNYDELAKSKPNVIFASFRQAHTKTIDEMKKAAPNAKILFVSPDNDNYISSIKEHTTLFGKIFKKEEKAKALNHKLSEEVKEAKKVINKDTVLLLNVDDKGISAFGPTGRFGGFLNKDLGINHADPKMKANSAGNIVTNEYLNKINPDKLFVINRTKNADDKTLPSALNNQVIKDMKAIKNHQVYQFEANAWYFSEGGIETTIHQLNKIEKAFKKKSFYTLLKI . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 315602 316642 . - . GCA_005502385.1_00846_mRNA GCA_005502385.1_00846 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQKSFKYILLILSVILILSACDKQSDSNSSSSKDTITVKNTYEFKDKNHTHSRGKNKTETVKVPVNPKRVAVLDYGALDIMQQMGLQDKIVSIAKGQGASFLPSSLSEFKNSKYTNLGNPGRPNYDELAKSKPNVIFASFRQAHTKTIDEMKKAAPNAKILFVSPDNDNYISSIKEHTTLFGKIFKKEEKAKALNHKLSEEVKEAKKVINKDTVLLLNVDDKGISAFGPTGRFGGFLNKDLGINHADPKMKANSAGNIVTNEYLNKINPDKLFVINRTKNADDKTLPSALNNQVIKDMKAIKNHQVYQFEANAWYFSEGGIETTIHQLNKIEKAFKKKSFYTLLKI . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 315602 316642 . - 0 GCA_005502385.1_00846 GCA_005502385.1_00846_gene,GCA_005502385.1_00846_mRNA GCA_005502385.1_00846 Petrobactin-binding protein YclQ GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MQKSFKYILLILSVILILSACDKQSDSNSSSSKDTITVKNTYEFKDKNHTHSRGKNKTETVKVPVNPKRVAVLDYGALDIMQQMGLQDKIVSIAKGQGASFLPSSLSEFKNSKYTNLGNPGRPNYDELAKSKPNVIFASFRQAHTKTIDEMKKAAPNAKILFVSPDNDNYISSIKEHTTLFGKIFKKEEKAKALNHKLSEEVKEAKKVINKDTVLLLNVDDKGISAFGPTGRFGGFLNKDLGINHADPKMKANSAGNIVTNEYLNKINPDKLFVINRTKNADDKTLPSALNNQVIKDMKAIKNHQVYQFEANAWYFSEGGIETTIHQLNKIEKAFKKKSFYTLLKI persistent 346 Transferrin-binding protein WP_070548573.1 UPI0008A44389 UniRef100_A0A4Q9WSB0,UniRef50_Q4L687,UniRef90_A0AAE5JPG7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 317874 319133 . - . GCA_005502385.1_00847_gene GCA_005502385.1_00847 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKFTELTVKEYETFVQNPSLESHYFQVTENIKTRENDGFEVVLLGVKDESNKVMAASLFSKIPTMGSYVYYSNRGPVMDYSDLGLVDFYLRELEKYLHQHQCLYVKLDPYWIYQIYDKDINPVEGHEKNDALVNLFKSHGYEHHGFTTKYDRSSQVRWMGVNYLKGETPASLKKQFDSQRKRNINKAINYGVKVRFLKRDELNIFLDLYRETEARTGFVSKTDEYFYNFIDTYGDKALVPLAYIDLDDYIKSLQTSLNDKETRRDQMMSKDNKSDKQLKKIAELDKQIEHDQKELLHASELRQTDGQILNLASGVYFANAYEVNYFSGGSSEKYNNYMGPYMMHWFMMNYCFDHGYDRYNFYGLSGDFTENSEDYGVYRFKRGFNVYIEELIGDFYKPINKPKYWLFKTLNRIRKKIKK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 317874 319133 . - . GCA_005502385.1_00847_mRNA GCA_005502385.1_00847 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKFTELTVKEYETFVQNPSLESHYFQVTENIKTRENDGFEVVLLGVKDESNKVMAASLFSKIPTMGSYVYYSNRGPVMDYSDLGLVDFYLRELEKYLHQHQCLYVKLDPYWIYQIYDKDINPVEGHEKNDALVNLFKSHGYEHHGFTTKYDRSSQVRWMGVNYLKGETPASLKKQFDSQRKRNINKAINYGVKVRFLKRDELNIFLDLYRETEARTGFVSKTDEYFYNFIDTYGDKALVPLAYIDLDDYIKSLQTSLNDKETRRDQMMSKDNKSDKQLKKIAELDKQIEHDQKELLHASELRQTDGQILNLASGVYFANAYEVNYFSGGSSEKYNNYMGPYMMHWFMMNYCFDHGYDRYNFYGLSGDFTENSEDYGVYRFKRGFNVYIEELIGDFYKPINKPKYWLFKTLNRIRKKIKK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 317874 319133 . - 0 GCA_005502385.1_00847 GCA_005502385.1_00847_gene,GCA_005502385.1_00847_mRNA GCA_005502385.1_00847 Aminoacyltransferase FemB GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKFTELTVKEYETFVQNPSLESHYFQVTENIKTRENDGFEVVLLGVKDESNKVMAASLFSKIPTMGSYVYYSNRGPVMDYSDLGLVDFYLRELEKYLHQHQCLYVKLDPYWIYQIYDKDINPVEGHEKNDALVNLFKSHGYEHHGFTTKYDRSSQVRWMGVNYLKGETPASLKKQFDSQRKRNINKAINYGVKVRFLKRDELNIFLDLYRETEARTGFVSKTDEYFYNFIDTYGDKALVPLAYIDLDDYIKSLQTSLNDKETRRDQMMSKDNKSDKQLKKIAELDKQIEHDQKELLHASELRQTDGQILNLASGVYFANAYEVNYFSGGSSEKYNNYMGPYMMHWFMMNYCFDHGYDRYNFYGLSGDFTENSEDYGVYRFKRGFNVYIEELIGDFYKPINKPKYWLFKTLNRIRKKIKK persistent 419 fmhB Methicillin resistance protein FemB 2.3.2.18 COG2348,M WP_049417592.1 UPI00066A4F36 UniRef100_A0A6N0I410,UniRef50_Q2FYR1,UniRef90_A0A380G190 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 319152 320414 . - . GCA_005502385.1_00848_gene GCA_005502385.1_00848 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKFTNLTATEFGDFTEKMPYSHFTQMTENYELKVAEKTETHLVGIKNRDNEVIAACMLTAVPVMKIFKYFYSNRGPVIDYENKELVHFFFNELSKYLKQQHCLYVRIDPYLPYQYRNHDGDITGNAGNDWFFDKMKQLGYQHEGFTTGFDPILQIRFHSVLNLKDKTAKDVLNGMDSLRKRNTKKVQKNGVKVRFLTKEELPIFRSFMEDTSETKEFSDREDSFYYNRFDHFKDRVLVPLAYIKFDEYLEELHAERQTLNKDLNKALKDIEKRPDNKKAQNKKINLEQQLKANEQKIDEATQLQLEHGNELPISAGFFFINPFEVVYYAGGTSNKYRHFAGSYAVQWTMINYAIDHGIDRYNFYGISGHFTDDAEDAGVVKFKKGFNADVIEYVGDFVKPINKPMYSLYTTLKKIKKRLN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 319152 320414 . - . GCA_005502385.1_00848_mRNA GCA_005502385.1_00848 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKFTNLTATEFGDFTEKMPYSHFTQMTENYELKVAEKTETHLVGIKNRDNEVIAACMLTAVPVMKIFKYFYSNRGPVIDYENKELVHFFFNELSKYLKQQHCLYVRIDPYLPYQYRNHDGDITGNAGNDWFFDKMKQLGYQHEGFTTGFDPILQIRFHSVLNLKDKTAKDVLNGMDSLRKRNTKKVQKNGVKVRFLTKEELPIFRSFMEDTSETKEFSDREDSFYYNRFDHFKDRVLVPLAYIKFDEYLEELHAERQTLNKDLNKALKDIEKRPDNKKAQNKKINLEQQLKANEQKIDEATQLQLEHGNELPISAGFFFINPFEVVYYAGGTSNKYRHFAGSYAVQWTMINYAIDHGIDRYNFYGISGHFTDDAEDAGVVKFKKGFNADVIEYVGDFVKPINKPMYSLYTTLKKIKKRLN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 319152 320414 . - 0 GCA_005502385.1_00848 GCA_005502385.1_00848_gene,GCA_005502385.1_00848_mRNA GCA_005502385.1_00848 Aminoacyltransferase FemA GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKFTNLTATEFGDFTEKMPYSHFTQMTENYELKVAEKTETHLVGIKNRDNEVIAACMLTAVPVMKIFKYFYSNRGPVIDYENKELVHFFFNELSKYLKQQHCLYVRIDPYLPYQYRNHDGDITGNAGNDWFFDKMKQLGYQHEGFTTGFDPILQIRFHSVLNLKDKTAKDVLNGMDSLRKRNTKKVQKNGVKVRFLTKEELPIFRSFMEDTSETKEFSDREDSFYYNRFDHFKDRVLVPLAYIKFDEYLEELHAERQTLNKDLNKALKDIEKRPDNKKAQNKKINLEQQLKANEQKIDEATQLQLEHGNELPISAGFFFINPFEVVYYAGGTSNKYRHFAGSYAVQWTMINYAIDHGIDRYNFYGISGHFTDDAEDAGVVKFKKGFNADVIEYVGDFVKPINKPMYSLYTTLKKIKKRLN persistent 420 femA Aminoacyltransferase FemA 2.3.2.17 WP_137689491.1 UPI0010F4BA0E UniRef100_UPI0010F4BA0E,UniRef50_Q2FYR2,UniRef90_O33650 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 320758 321492 . - . GCA_005502385.1_00849_gene GCA_005502385.1_00849 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKLFIPYIMGNRQFLENVKLLDKSGADMIEIGIPFSDPVADGPIIMKASHEALQNHITIDYIFDELDKHQNEINCKYVLMTYYNVILSYGEKAFFKKCDDIGVYGVIIPDLPFELIEQLKQQLNDNRVVKIISLIAMTADTNRIQNIAKHAEGFIYTVTMNATTGQDGTFHPKLKDQIKMIKSFTNLPVVVGFGIRTTDHIKDLVKDVDGVVIGSEIVRRFENDDLSQTGEYLREIRQILDNY . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 320758 321492 . - . GCA_005502385.1_00849_mRNA GCA_005502385.1_00849 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKLFIPYIMGNRQFLENVKLLDKSGADMIEIGIPFSDPVADGPIIMKASHEALQNHITIDYIFDELDKHQNEINCKYVLMTYYNVILSYGEKAFFKKCDDIGVYGVIIPDLPFELIEQLKQQLNDNRVVKIISLIAMTADTNRIQNIAKHAEGFIYTVTMNATTGQDGTFHPKLKDQIKMIKSFTNLPVVVGFGIRTTDHIKDLVKDVDGVVIGSEIVRRFENDDLSQTGEYLREIRQILDNY . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 320758 321492 . - 0 GCA_005502385.1_00849 GCA_005502385.1_00849_gene,GCA_005502385.1_00849_mRNA GCA_005502385.1_00849 Tryptophan synthase alpha chain GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSKLFIPYIMGNRQFLENVKLLDKSGADMIEIGIPFSDPVADGPIIMKASHEALQNHITIDYIFDELDKHQNEINCKYVLMTYYNVILSYGEKAFFKKCDDIGVYGVIIPDLPFELIEQLKQQLNDNRVVKIISLIAMTADTNRIQNIAKHAEGFIYTVTMNATTGQDGTFHPKLKDQIKMIKSFTNLPVVVGFGIRTTDHIKDLVKDVDGVVIGSEIVRRFENDDLSQTGEYLREIRQILDNY persistent 244 trpA tryptophan synthase subunit alpha 4.2.1.20 GO:0000162,GO:0004834 WP_137689492.1 UPI0010F459A5 UniRef100_UPI0010F459A5,UniRef50_Q2FYR3,UniRef90_A0A8X8GTZ6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 321485 322699 . - . GCA_005502385.1_00850_gene GCA_005502385.1_00850 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKQIQTEANELGFFGEYGGQYVPETLMPAIIELKRAYKKAKNDPKFQQEIAYYLKDYVGRETPLTYAKSYTETLGGAKIYLKREDLNHTGAHKINNAIGQALLAKRMGKHKLVAETGAGQHGVASATVAALFDMELIVFMGREDIKRQQLNVFRMELLGAKVEAVDEGQGTLSDAVNKALQYWVSHVEDTHYLLGSALGPDPFPTMVRDFQSVIGQEIKSQLLEKEHRLPDAVVACVGGGSNAIGTFYPFIKDNVKLYGVEAAGRGKDTNQHALAIGKGKAGVLHGSKMYLIQDEHGQIELAHSISAGLDYPGIGPEHSYYHDIGRVTYECASDEEAMEALVRFTKIEGIIPAIESAHALSYVEKLAPQMKQNDILVVTISGRGDKDMETIQQYIQQRKEDKNE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 321485 322699 . - . GCA_005502385.1_00850_mRNA GCA_005502385.1_00850 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKQIQTEANELGFFGEYGGQYVPETLMPAIIELKRAYKKAKNDPKFQQEIAYYLKDYVGRETPLTYAKSYTETLGGAKIYLKREDLNHTGAHKINNAIGQALLAKRMGKHKLVAETGAGQHGVASATVAALFDMELIVFMGREDIKRQQLNVFRMELLGAKVEAVDEGQGTLSDAVNKALQYWVSHVEDTHYLLGSALGPDPFPTMVRDFQSVIGQEIKSQLLEKEHRLPDAVVACVGGGSNAIGTFYPFIKDNVKLYGVEAAGRGKDTNQHALAIGKGKAGVLHGSKMYLIQDEHGQIELAHSISAGLDYPGIGPEHSYYHDIGRVTYECASDEEAMEALVRFTKIEGIIPAIESAHALSYVEKLAPQMKQNDILVVTISGRGDKDMETIQQYIQQRKEDKNE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 321485 322699 . - 0 GCA_005502385.1_00850 GCA_005502385.1_00850_gene,GCA_005502385.1_00850_mRNA GCA_005502385.1_00850 Tryptophan synthase beta chain GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKQIQTEANELGFFGEYGGQYVPETLMPAIIELKRAYKKAKNDPKFQQEIAYYLKDYVGRETPLTYAKSYTETLGGAKIYLKREDLNHTGAHKINNAIGQALLAKRMGKHKLVAETGAGQHGVASATVAALFDMELIVFMGREDIKRQQLNVFRMELLGAKVEAVDEGQGTLSDAVNKALQYWVSHVEDTHYLLGSALGPDPFPTMVRDFQSVIGQEIKSQLLEKEHRLPDAVVACVGGGSNAIGTFYPFIKDNVKLYGVEAAGRGKDTNQHALAIGKGKAGVLHGSKMYLIQDEHGQIELAHSISAGLDYPGIGPEHSYYHDIGRVTYECASDEEAMEALVRFTKIEGIIPAIESAHALSYVEKLAPQMKQNDILVVTISGRGDKDMETIQQYIQQRKEDKNE persistent 404 trpB tryptophan synthase subunit beta 4.2.1.20 GO:0000162,GO:0004834 WP_019835378.1 UPI0003795015 UniRef100_UPI0003795015,UniRef50_Q822W3,UniRef90_A0AAE5MZH1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 322680 323330 . - . GCA_005502385.1_00851_gene GCA_005502385.1_00851 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNILKFCGFKTKSDILKVNSLDIDMIGFIHYPKSKRHLNIEQINYLNQFVAKHINQVIVVVNPTYKELSTLLQQTNVNAIQFHGNETIELIQKVKLNFKNIKIIKALPATENLNRDINQYKPWTDLFIIDTPSIQFGGTGQTFNWQILESVSQDIPYLIAGGINISAIQQIEKLDLSHKGYDISSGIETNECKDKLKMETIINYVKRSLEYETDTN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 322680 323330 . - . GCA_005502385.1_00851_mRNA GCA_005502385.1_00851 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNILKFCGFKTKSDILKVNSLDIDMIGFIHYPKSKRHLNIEQINYLNQFVAKHINQVIVVVNPTYKELSTLLQQTNVNAIQFHGNETIELIQKVKLNFKNIKIIKALPATENLNRDINQYKPWTDLFIIDTPSIQFGGTGQTFNWQILESVSQDIPYLIAGGINISAIQQIEKLDLSHKGYDISSGIETNECKDKLKMETIINYVKRSLEYETDTN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 322680 323330 . - 0 GCA_005502385.1_00851 GCA_005502385.1_00851_gene,GCA_005502385.1_00851_mRNA GCA_005502385.1_00851 N-(5'-phosphoribosyl)anthranilate isomerase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNILKFCGFKTKSDILKVNSLDIDMIGFIHYPKSKRHLNIEQINYLNQFVAKHINQVIVVVNPTYKELSTLLQQTNVNAIQFHGNETIELIQKVKLNFKNIKIIKALPATENLNRDINQYKPWTDLFIIDTPSIQFGGTGQTFNWQILESVSQDIPYLIAGGINISAIQQIEKLDLSHKGYDISSGIETNECKDKLKMETIINYVKRSLEYETDTN persistent 216 phosphoribosylanthranilate isomerase 5.3.1.24 WP_019835379.1 UPI00037023BB UniRef100_UPI00037023BB,UniRef50_Q2FYR5,UniRef90_A0A3S7GW90 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 323327 324106 . - . GCA_005502385.1_00852_gene GCA_005502385.1_00852 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTILDEIVQYKKQLLSDGYYTDKIKHIKKVDVSYKSALETTLKRESTLSIIAEIKSKSPSVKAFKDINLEHQIAKYENHGANAISILTDEKYFGGSFERLQTLTQLTHLPVLCKDFIIDPLQIDLAKRAGASIILLIVNILTNDTLQSLYHYAMSQNLEVLVEVHNKEELERAYQIKPKIIGVNNRDLKTFITKVEHTNDILEMKKEGYYYISESGITTLNDVKKIVSSGIDGLLVGGALMNSNNISSLLPSLKLNKEK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 323327 324106 . - . GCA_005502385.1_00852_mRNA GCA_005502385.1_00852 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTILDEIVQYKKQLLSDGYYTDKIKHIKKVDVSYKSALETTLKRESTLSIIAEIKSKSPSVKAFKDINLEHQIAKYENHGANAISILTDEKYFGGSFERLQTLTQLTHLPVLCKDFIIDPLQIDLAKRAGASIILLIVNILTNDTLQSLYHYAMSQNLEVLVEVHNKEELERAYQIKPKIIGVNNRDLKTFITKVEHTNDILEMKKEGYYYISESGITTLNDVKKIVSSGIDGLLVGGALMNSNNISSLLPSLKLNKEK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 323327 324106 . - 0 GCA_005502385.1_00852 GCA_005502385.1_00852_gene,GCA_005502385.1_00852_mRNA GCA_005502385.1_00852 Tryptophan biosynthesis protein TrpCF GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTILDEIVQYKKQLLSDGYYTDKIKHIKKVDVSYKSALETTLKRESTLSIIAEIKSKSPSVKAFKDINLEHQIAKYENHGANAISILTDEKYFGGSFERLQTLTQLTHLPVLCKDFIIDPLQIDLAKRAGASIILLIVNILTNDTLQSLYHYAMSQNLEVLVEVHNKEELERAYQIKPKIIGVNNRDLKTFITKVEHTNDILEMKKEGYYYISESGITTLNDVKKIVSSGIDGLLVGGALMNSNNISSLLPSLKLNKEK persistent 259 trpC indole-3-glycerol phosphate synthase TrpC 4.1.1.48 GO:0004425,GO:0006568 WP_002449783.1 UPI00019FC0F2 UniRef100_UPI00019FC0F2,UniRef50_Q2FYR6,UniRef90_A0A4V2KXD6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 324109 325116 . - . GCA_005502385.1_00853_gene GCA_005502385.1_00853 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMTLTLLNQIQSHVTLSQHETTEFIQYLINPECNIQDKVKLLQAFTNKSIQQKELTYIVKSLIHTMYSTQPEYKGSICVCGTGGDKSNSFNISTTVSFVVASADVPVIKHGNKSITSNSGSTDLLQQLHIPTTKVANVAKQVSKTHLAFISAMESYPIMKYIQPIRKLIHEPTIFNIVGPLINPFKLDYQVMGVYDASQLSMIIKTMKDLGRRRGIVLHGANRMDEATLSGDNEIYELHEDGTISHYVLNARDYGIAHANNIELQGGTPEENKNITIDILSGKDHSPKRNVVVLNAALALYISNRVDSIKKGVDLAKDLIDSGKALKQYQLMKGE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 324109 325116 . - . GCA_005502385.1_00853_mRNA GCA_005502385.1_00853 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMTLTLLNQIQSHVTLSQHETTEFIQYLINPECNIQDKVKLLQAFTNKSIQQKELTYIVKSLIHTMYSTQPEYKGSICVCGTGGDKSNSFNISTTVSFVVASADVPVIKHGNKSITSNSGSTDLLQQLHIPTTKVANVAKQVSKTHLAFISAMESYPIMKYIQPIRKLIHEPTIFNIVGPLINPFKLDYQVMGVYDASQLSMIIKTMKDLGRRRGIVLHGANRMDEATLSGDNEIYELHEDGTISHYVLNARDYGIAHANNIELQGGTPEENKNITIDILSGKDHSPKRNVVVLNAALALYISNRVDSIKKGVDLAKDLIDSGKALKQYQLMKGE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 324109 325116 . - 0 GCA_005502385.1_00853 GCA_005502385.1_00853_gene,GCA_005502385.1_00853_mRNA GCA_005502385.1_00853 Anthranilate phosphoribosyltransferase 2 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMTLTLLNQIQSHVTLSQHETTEFIQYLINPECNIQDKVKLLQAFTNKSIQQKELTYIVKSLIHTMYSTQPEYKGSICVCGTGGDKSNSFNISTTVSFVVASADVPVIKHGNKSITSNSGSTDLLQQLHIPTTKVANVAKQVSKTHLAFISAMESYPIMKYIQPIRKLIHEPTIFNIVGPLINPFKLDYQVMGVYDASQLSMIIKTMKDLGRRRGIVLHGANRMDEATLSGDNEIYELHEDGTISHYVLNARDYGIAHANNIELQGGTPEENKNITIDILSGKDHSPKRNVVVLNAALALYISNRVDSIKKGVDLAKDLIDSGKALKQYQLMKGE persistent 335 Anthranilate phosphoribosyltransferase 2.4.2.18 UPI00047310FD UniRef100_A0AAE5JP75,UniRef50_Q2FYR7,UniRef90_A0A974KVU0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 325058 325687 . - . GCA_005502385.1_00854_gene GCA_005502385.1_00854 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MILIIDNYDSFTYNLVDIVSQLDDVIVKYPDDKDVLNYVNQSDGLIISPGPGHPLDSNHLLNIIERYKSLPILGVCLGAQAITCYYGGHVIQGEKVMHGKVDILTVIQQTKLYNNLANQFNIMRYHSLISDEISFPSQLIITGRTKDCIQSYETKNGLHFGIQYHPESFATDQGQQIIKNFIDIVKERGKYDDLNITQPNSKPCNTLTT . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 325058 325687 . - . GCA_005502385.1_00854_mRNA GCA_005502385.1_00854 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MILIIDNYDSFTYNLVDIVSQLDDVIVKYPDDKDVLNYVNQSDGLIISPGPGHPLDSNHLLNIIERYKSLPILGVCLGAQAITCYYGGHVIQGEKVMHGKVDILTVIQQTKLYNNLANQFNIMRYHSLISDEISFPSQLIITGRTKDCIQSYETKNGLHFGIQYHPESFATDQGQQIIKNFIDIVKERGKYDDLNITQPNSKPCNTLTT . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 325058 325687 . - 0 GCA_005502385.1_00854 GCA_005502385.1_00854_gene,GCA_005502385.1_00854_mRNA GCA_005502385.1_00854 Aminodeoxychorismate/anthranilate synthase component 2 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MILIIDNYDSFTYNLVDIVSQLDDVIVKYPDDKDVLNYVNQSDGLIISPGPGHPLDSNHLLNIIERYKSLPILGVCLGAQAITCYYGGHVIQGEKVMHGKVDILTVIQQTKLYNNLANQFNIMRYHSLISDEISFPSQLIITGRTKDCIQSYETKNGLHFGIQYHPESFATDQGQQIIKNFIDIVKERGKYDDLNITQPNSKPCNTLTT persistent 209 Glutamine amidotransferase WP_002449807.1 UPI00019FC0F0 UniRef100_A0AAE5JNG3,UniRef50_B9DP49,UniRef90_A0AAE5JNG3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 325684 327093 . - . GCA_005502385.1_00855_gene GCA_005502385.1_00855 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIYYEILRANITPEVLGKLKKNKIILESTSQKQVKGRYSIVAFESYGSVVLNNDLLTIKTKKQNIEITEKSYEYLKDYINQFNIQITDEKLKHLPFVSGFIGTCSFDLIRHEFPILKQQSIQEIKDSNDIEFHMIEDVYVFDHYKDELYVIATNQFSEVEQKDLEERVKNRVKALSQIKAYTDDYIHPPTPSNIMPNVSDDEFINTIKQLKELIKEGDMFQVVPSRIYSYNHYFKNNTLQLSYQLYQNLKRRNPSPYMYYINMNTQIIVGSSPESFVAVQDGTVITNPIAGTIKRGKTIKEDKQNAEQLLSDEKELSEHRMLVDLGRNDIHRVSRTGSSKITKLMEIEKYEHVMHIVSEVRGEIKRELSPMTVIANLLPTGTVSGAPKLRAIRRIYETYPYKRGLYSGGVGYINCNQNLDFALAIRTMLIDDTTVKVEAGCGVVYDSVPEKELEETLLKAKSLLEVTP . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 325684 327093 . - . GCA_005502385.1_00855_mRNA GCA_005502385.1_00855 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIYYEILRANITPEVLGKLKKNKIILESTSQKQVKGRYSIVAFESYGSVVLNNDLLTIKTKKQNIEITEKSYEYLKDYINQFNIQITDEKLKHLPFVSGFIGTCSFDLIRHEFPILKQQSIQEIKDSNDIEFHMIEDVYVFDHYKDELYVIATNQFSEVEQKDLEERVKNRVKALSQIKAYTDDYIHPPTPSNIMPNVSDDEFINTIKQLKELIKEGDMFQVVPSRIYSYNHYFKNNTLQLSYQLYQNLKRRNPSPYMYYINMNTQIIVGSSPESFVAVQDGTVITNPIAGTIKRGKTIKEDKQNAEQLLSDEKELSEHRMLVDLGRNDIHRVSRTGSSKITKLMEIEKYEHVMHIVSEVRGEIKRELSPMTVIANLLPTGTVSGAPKLRAIRRIYETYPYKRGLYSGGVGYINCNQNLDFALAIRTMLIDDTTVKVEAGCGVVYDSVPEKELEETLLKAKSLLEVTP . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 325684 327093 . - 0 GCA_005502385.1_00855 GCA_005502385.1_00855_gene,GCA_005502385.1_00855_mRNA GCA_005502385.1_00855 Aminodeoxychorismate synthase component 1 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIYYEILRANITPEVLGKLKKNKIILESTSQKQVKGRYSIVAFESYGSVVLNNDLLTIKTKKQNIEITEKSYEYLKDYINQFNIQITDEKLKHLPFVSGFIGTCSFDLIRHEFPILKQQSIQEIKDSNDIEFHMIEDVYVFDHYKDELYVIATNQFSEVEQKDLEERVKNRVKALSQIKAYTDDYIHPPTPSNIMPNVSDDEFINTIKQLKELIKEGDMFQVVPSRIYSYNHYFKNNTLQLSYQLYQNLKRRNPSPYMYYINMNTQIIVGSSPESFVAVQDGTVITNPIAGTIKRGKTIKEDKQNAEQLLSDEKELSEHRMLVDLGRNDIHRVSRTGSSKITKLMEIEKYEHVMHIVSEVRGEIKRELSPMTVIANLLPTGTVSGAPKLRAIRRIYETYPYKRGLYSGGVGYINCNQNLDFALAIRTMLIDDTTVKVEAGCGVVYDSVPEKELEETLLKAKSLLEVTP persistent 469 anthranilate synthase component I 4.1.3.27 WP_137689493.1 UPI0010F457E9 UniRef100_UPI0010F457E9,UniRef50_A0A6N3A4A0,UniRef90_A0A4Q9WUE9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 327581 328615 . - . GCA_005502385.1_00856_gene GCA_005502385.1_00856 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MESKILELIQNLTNINSPSGNAYKAISYVKQKVEHLGYSTQLTNKGALIITVEGEDNERQRCITAHVDTLGAMVKEIKEDGRLTIDLIGGFKYNAIEGEYCQIETDSGETYTGTICLHETSVHVYRENEKIPRDIEHMEVRIDEKTSSKQETEDLGIEIGNFISFDPRTEITSSGFIKSRHLDDKASVAMILDLLERIKSEQIKLPHTIQFYISNNEEIGYGANASISNKIVEFIAFDMGALGEGQSSNEYTVSICAKDASGPYHKGLKTHLVNLCKFNHIPYKIDIYPYYTSDASAALKAGADIKHGLFGAGIESSHALERTHIDSIHAAQNLLYAYCLSSIN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 327581 328615 . - . GCA_005502385.1_00856_mRNA GCA_005502385.1_00856 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MESKILELIQNLTNINSPSGNAYKAISYVKQKVEHLGYSTQLTNKGALIITVEGEDNERQRCITAHVDTLGAMVKEIKEDGRLTIDLIGGFKYNAIEGEYCQIETDSGETYTGTICLHETSVHVYRENEKIPRDIEHMEVRIDEKTSSKQETEDLGIEIGNFISFDPRTEITSSGFIKSRHLDDKASVAMILDLLERIKSEQIKLPHTIQFYISNNEEIGYGANASISNKIVEFIAFDMGALGEGQSSNEYTVSICAKDASGPYHKGLKTHLVNLCKFNHIPYKIDIYPYYTSDASAALKAGADIKHGLFGAGIESSHALERTHIDSIHAAQNLLYAYCLSSIN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 327581 328615 . - 0 GCA_005502385.1_00856 GCA_005502385.1_00856_gene,GCA_005502385.1_00856_mRNA GCA_005502385.1_00856 Putative aminopeptidase YsdC GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MESKILELIQNLTNINSPSGNAYKAISYVKQKVEHLGYSTQLTNKGALIITVEGEDNERQRCITAHVDTLGAMVKEIKEDGRLTIDLIGGFKYNAIEGEYCQIETDSGETYTGTICLHETSVHVYRENEKIPRDIEHMEVRIDEKTSSKQETEDLGIEIGNFISFDPRTEITSSGFIKSRHLDDKASVAMILDLLERIKSEQIKLPHTIQFYISNNEEIGYGANASISNKIVEFIAFDMGALGEGQSSNEYTVSICAKDASGPYHKGLKTHLVNLCKFNHIPYKIDIYPYYTSDASAALKAGADIKHGLFGAGIESSHALERTHIDSIHAAQNLLYAYCLSSIN persistent 344 M42 family metallopeptidase WP_019835382.1 UPI00037AD824 UniRef100_UPI00037AD824,UniRef50_O07603,UniRef90_A0A4Q9WSB8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 328751 329842 . + . GCA_005502385.1_00857_gene GCA_005502385.1_00857 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKNILFVGLGLIGGSLASNLKFYQSDFIISAYDTDVTQLDKAMSIGIIDKKINDYALGVKEADIIIFATPVHQTAIYLNSLPNYETKSHLIVTDTGSTKLIIQNFEKRLLESNIHLVSGHPMAGSHKSGVLNSKKHLFENAYYILVYDDEHNTQAAKTLQDLLSPTLAKFIVTNAKEHDYVTGIVSHVPHIIASSLVHLSSSHANDHALVKQLAAGGFRDITRIASSNAEMWKDISLSNKQNIISLLEDMQTNIKDMIVKLKNEEEQQIYQFFEEAKIFRDQLPLKQHGVVNVGYDLYIDIPDKAGMINKITSILSLHNISIRNLKILEVREDILGALQVTFKTPKDRELGIVALNEFDTYIP . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 328751 329842 . + . GCA_005502385.1_00857_mRNA GCA_005502385.1_00857 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKNILFVGLGLIGGSLASNLKFYQSDFIISAYDTDVTQLDKAMSIGIIDKKINDYALGVKEADIIIFATPVHQTAIYLNSLPNYETKSHLIVTDTGSTKLIIQNFEKRLLESNIHLVSGHPMAGSHKSGVLNSKKHLFENAYYILVYDDEHNTQAAKTLQDLLSPTLAKFIVTNAKEHDYVTGIVSHVPHIIASSLVHLSSSHANDHALVKQLAAGGFRDITRIASSNAEMWKDISLSNKQNIISLLEDMQTNIKDMIVKLKNEEEQQIYQFFEEAKIFRDQLPLKQHGVVNVGYDLYIDIPDKAGMINKITSILSLHNISIRNLKILEVREDILGALQVTFKTPKDRELGIVALNEFDTYIP . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 328751 329842 . + 0 GCA_005502385.1_00857 GCA_005502385.1_00857_gene,GCA_005502385.1_00857_mRNA GCA_005502385.1_00857 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKNILFVGLGLIGGSLASNLKFYQSDFIISAYDTDVTQLDKAMSIGIIDKKINDYALGVKEADIIIFATPVHQTAIYLNSLPNYETKSHLIVTDTGSTKLIIQNFEKRLLESNIHLVSGHPMAGSHKSGVLNSKKHLFENAYYILVYDDEHNTQAAKTLQDLLSPTLAKFIVTNAKEHDYVTGIVSHVPHIIASSLVHLSSSHANDHALVKQLAAGGFRDITRIASSNAEMWKDISLSNKQNIISLLEDMQTNIKDMIVKLKNEEEQQIYQFFEEAKIFRDQLPLKQHGVVNVGYDLYIDIPDKAGMINKITSILSLHNISIRNLKILEVREDILGALQVTFKTPKDRELGIVALNEFDTYIP persistent 363 prephenate dehydrogenase 1.3.1.12 WP_049336310.1 UPI00066CE760 UniRef100_UPI00066CE760,UniRef50_Q2FYS1,UniRef90_A0A3S7GVL5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 329894 331156 . - . GCA_005502385.1_00858_gene GCA_005502385.1_00858 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYDYNLLEDRDILCVDQKSFYASVSCIEKGLDPLTTKLAVVADTKRQGSVVLAATPKLKELGIKTGSRLFEIPQRNDIYIINPSMRRYLEVSLEISKIALKYVPEEDLHQYSIDEFFMDVTNSYHLFNTTVYSFAKCFQKEVLDKTGIYCTIGIGSNLLLSKVAMDVEAKHLKEGITEWRYHDIPDKLWCISPLKSFWGINKKTEIKLNKKGIITIGDLAHYPHRYLKKDFGILGTDMHLHANGIDQSKIREKSKIHNPAICKSQILMRDYQFNETKIVMQELIEDVACRLRERKQLARTINFSFGYTEGGGIHKQHTLTDATNLEQDMFKVVNDYANQLCDKHALYRTLSVSLTQFINEENRQLNLFIDEYKRQRDENLAKTIDTLQKKYGKGIVSKAISYTESGTKHNRLGLMAGHKM . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 329894 331156 . - . GCA_005502385.1_00858_mRNA GCA_005502385.1_00858 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYDYNLLEDRDILCVDQKSFYASVSCIEKGLDPLTTKLAVVADTKRQGSVVLAATPKLKELGIKTGSRLFEIPQRNDIYIINPSMRRYLEVSLEISKIALKYVPEEDLHQYSIDEFFMDVTNSYHLFNTTVYSFAKCFQKEVLDKTGIYCTIGIGSNLLLSKVAMDVEAKHLKEGITEWRYHDIPDKLWCISPLKSFWGINKKTEIKLNKKGIITIGDLAHYPHRYLKKDFGILGTDMHLHANGIDQSKIREKSKIHNPAICKSQILMRDYQFNETKIVMQELIEDVACRLRERKQLARTINFSFGYTEGGGIHKQHTLTDATNLEQDMFKVVNDYANQLCDKHALYRTLSVSLTQFINEENRQLNLFIDEYKRQRDENLAKTIDTLQKKYGKGIVSKAISYTESGTKHNRLGLMAGHKM . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 329894 331156 . - 0 GCA_005502385.1_00858 GCA_005502385.1_00858_gene,GCA_005502385.1_00858_mRNA GCA_005502385.1_00858 Protein UmuC GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MYDYNLLEDRDILCVDQKSFYASVSCIEKGLDPLTTKLAVVADTKRQGSVVLAATPKLKELGIKTGSRLFEIPQRNDIYIINPSMRRYLEVSLEISKIALKYVPEEDLHQYSIDEFFMDVTNSYHLFNTTVYSFAKCFQKEVLDKTGIYCTIGIGSNLLLSKVAMDVEAKHLKEGITEWRYHDIPDKLWCISPLKSFWGINKKTEIKLNKKGIITIGDLAHYPHRYLKKDFGILGTDMHLHANGIDQSKIREKSKIHNPAICKSQILMRDYQFNETKIVMQELIEDVACRLRERKQLARTINFSFGYTEGGGIHKQHTLTDATNLEQDMFKVVNDYANQLCDKHALYRTLSVSLTQFINEENRQLNLFIDEYKRQRDENLAKTIDTLQKKYGKGIVSKAISYTESGTKHNRLGLMAGHKM persistent 420 Y-family DNA polymerase WP_137689494.1 UPI0009C94A11 UniRef100_UPI0009C94A11,UniRef50_A0A6N3A9E1,UniRef90_A0A4Q9WTH6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 331305 331427 . + . GCA_005502385.1_00859_gene GCA_005502385.1_00859 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPIVNVKLLEGRSDEQLKNLVTEVTNAVEKTTGANREQSM . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 331305 331427 . + . GCA_005502385.1_00859_mRNA GCA_005502385.1_00859 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPIVNVKLLEGRSDEQLKNLVTEVTNAVEKTTGANREQSM . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 331305 331427 . + 0 GCA_005502385.1_00859 GCA_005502385.1_00859_gene,GCA_005502385.1_00859_mRNA GCA_005502385.1_00859 putative tautomerase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MPIVNVKLLEGRSDEQLKNLVTEVTNAVEKTTGANREQSM persistent 40 hypothetical protein . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 331568 332551 . - . GCA_005502385.1_00860_gene GCA_005502385.1_00860 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEEKDNTILRRQTGTTIPSKRRKKKKLRKLPFVILIIVVLLIVMITYVVHGYQSGMKYAQEHAKDIKFHKFNGAVKNDGKITVLMLGADQANGGKSRTDSIMVVQYDYIKKKMKMMSIMRDIYAEIPGYDKYKINAAYSLGGPELLRQTLNKNLGINPEYYAVIDFTGFEKMIDELEPNGVPIDVEKDMSENIGVSLKKGHHRLNGKELLGYARFRHDPEGDFGRVRRQQQVMQTLKKELITPSTIVKLPKVAGILRGYINTDMPNSAIFQTGLSFGIRGDKNVETLTVPLKNSYQNINTNNDGSALDIDKEKNKKAIESFLKDNK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 331568 332551 . - . GCA_005502385.1_00860_mRNA GCA_005502385.1_00860 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEEKDNTILRRQTGTTIPSKRRKKKKLRKLPFVILIIVVLLIVMITYVVHGYQSGMKYAQEHAKDIKFHKFNGAVKNDGKITVLMLGADQANGGKSRTDSIMVVQYDYIKKKMKMMSIMRDIYAEIPGYDKYKINAAYSLGGPELLRQTLNKNLGINPEYYAVIDFTGFEKMIDELEPNGVPIDVEKDMSENIGVSLKKGHHRLNGKELLGYARFRHDPEGDFGRVRRQQQVMQTLKKELITPSTIVKLPKVAGILRGYINTDMPNSAIFQTGLSFGIRGDKNVETLTVPLKNSYQNINTNNDGSALDIDKEKNKKAIESFLKDNK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 331568 332551 . - 0 GCA_005502385.1_00860 GCA_005502385.1_00860_gene,GCA_005502385.1_00860_mRNA GCA_005502385.1_00860 Regulatory protein MsrR GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEEKDNTILRRQTGTTIPSKRRKKKKLRKLPFVILIIVVLLIVMITYVVHGYQSGMKYAQEHAKDIKFHKFNGAVKNDGKITVLMLGADQANGGKSRTDSIMVVQYDYIKKKMKMMSIMRDIYAEIPGYDKYKINAAYSLGGPELLRQTLNKNLGINPEYYAVIDFTGFEKMIDELEPNGVPIDVEKDMSENIGVSLKKGHHRLNGKELLGYARFRHDPEGDFGRVRRQQQVMQTLKKELITPSTIVKLPKVAGILRGYINTDMPNSAIFQTGLSFGIRGDKNVETLTVPLKNSYQNINTNNDGSALDIDKEKNKKAIESFLKDNK persistent 327 msrR Regulatory protein MsrR 2.7.8.- WP_019835385.1 UPI00038057E9 UniRef100_UPI00038057E9,UniRef50_Q7BHL7,UniRef90_A0A4Q9WVE1 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 332692 333207 . + . GCA_005502385.1_00861_gene GCA_005502385.1_00861 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNINTAYFAGGCFWCMTKPFDQFEGIESVTSGFMGGSVKNPTYEQVKSGTTGHYETVKIEYDVALFSYHKLLEIFFSVIDPLDAGGQFQDRGSQYQTAIFYTNDDQRKVAINYIKDLEQTMHSDKAIATKVLPASNFYKAEEYHQNFYKKNPERYAQEQRDRANYDPRSNS . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 332692 333207 . + . GCA_005502385.1_00861_mRNA GCA_005502385.1_00861 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNINTAYFAGGCFWCMTKPFDQFEGIESVTSGFMGGSVKNPTYEQVKSGTTGHYETVKIEYDVALFSYHKLLEIFFSVIDPLDAGGQFQDRGSQYQTAIFYTNDDQRKVAINYIKDLEQTMHSDKAIATKVLPASNFYKAEEYHQNFYKKNPERYAQEQRDRANYDPRSNS . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 332692 333207 . + 0 GCA_005502385.1_00861 GCA_005502385.1_00861_gene,GCA_005502385.1_00861_mRNA GCA_005502385.1_00861 Peptide methionine sulfoxide reductase MsrA 1 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNINTAYFAGGCFWCMTKPFDQFEGIESVTSGFMGGSVKNPTYEQVKSGTTGHYETVKIEYDVALFSYHKLLEIFFSVIDPLDAGGQFQDRGSQYQTAIFYTNDDQRKVAINYIKDLEQTMHSDKAIATKVLPASNFYKAEEYHQNFYKKNPERYAQEQRDRANYDPRSNS persistent 171 msrA Peptide methionine sulfoxide reductase MsrA WP_002449832.1 UPI00019FC0E9 UniRef100_A0A2A1MEN5,UniRef50_P0A084,UniRef90_A0A2A1MEN5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 333245 335767 . - . GCA_005502385.1_00862_gene GCA_005502385.1_00862 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEEHKNRLISILKVVFAVTLFIVVVATLYHELSHINFKQTLEAFSKINRWFLIGLFICGGASMLLLSLYDVILVKTLKLSIPLNKVFRLSYIINAFNAIVGFGGFIGAGFRTFIYKNYTSDRKRLLHAISIILVSMLTGLSFLSILVVLHIFDASHILDKVRFVKWVLYVVALFLPIFIVYTVVKPVTEHNKLVGIYCTLVSSIEWIAAAVVLYLSAWMIDIHVAFTTLLGIFIIAALSGLISFIPGGFGAFDLVVLLGLKSLDIPEEKILIALLLYRFAYYFVPVIIALILSTFEFGNSARKYFEESKYFVPAKDVTSFILSYQKDIISKIPAFALSILALLTSFIFFINNVTIVYDGLYDADHFIYYIMLSIHTSACLILLVNVRGIYKQSKRAIMYSTISLVLIFLATLYTYASIMLLTWLIIIFILLILAYRRAKVFKRPFRLKNLIFTLIISVIVLYINHFIISETLYALDLYHLEMDTSLLKYYFWLTVVVVILLIVGIAWLFGRRFERPHQFQEFSQCKSIIETYGGNYLSHLIYSGDKDVFMHDSEQAFLMYRYKSNALVVLGDPIGNTASFQSLLDDFYSYAEKLGYDVIFYQVSDRFMPLYHNFGNQFFKLGEEAIIDLTQFTTSGKKRRGFRATLNKFNDLNIKFEIIEPPFSKAFIEELRKVSDKWLDGRTEMHFSVGQFTEQYLDKAPIGIMKNEEGKIIAFCTLMPTYYNEAISVDLIRWLPELDLPLMDGLYLHMLLWGKEKGYKAFNMGMATLSNVGQLDYSYLRERIAGRVFEHFNGLYRFQGLRRYKEKYSPQWEPRFLVYRKDSSLWYSMLKVMRVIRHK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 333245 335767 . - . GCA_005502385.1_00862_mRNA GCA_005502385.1_00862 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEEHKNRLISILKVVFAVTLFIVVVATLYHELSHINFKQTLEAFSKINRWFLIGLFICGGASMLLLSLYDVILVKTLKLSIPLNKVFRLSYIINAFNAIVGFGGFIGAGFRTFIYKNYTSDRKRLLHAISIILVSMLTGLSFLSILVVLHIFDASHILDKVRFVKWVLYVVALFLPIFIVYTVVKPVTEHNKLVGIYCTLVSSIEWIAAAVVLYLSAWMIDIHVAFTTLLGIFIIAALSGLISFIPGGFGAFDLVVLLGLKSLDIPEEKILIALLLYRFAYYFVPVIIALILSTFEFGNSARKYFEESKYFVPAKDVTSFILSYQKDIISKIPAFALSILALLTSFIFFINNVTIVYDGLYDADHFIYYIMLSIHTSACLILLVNVRGIYKQSKRAIMYSTISLVLIFLATLYTYASIMLLTWLIIIFILLILAYRRAKVFKRPFRLKNLIFTLIISVIVLYINHFIISETLYALDLYHLEMDTSLLKYYFWLTVVVVILLIVGIAWLFGRRFERPHQFQEFSQCKSIIETYGGNYLSHLIYSGDKDVFMHDSEQAFLMYRYKSNALVVLGDPIGNTASFQSLLDDFYSYAEKLGYDVIFYQVSDRFMPLYHNFGNQFFKLGEEAIIDLTQFTTSGKKRRGFRATLNKFNDLNIKFEIIEPPFSKAFIEELRKVSDKWLDGRTEMHFSVGQFTEQYLDKAPIGIMKNEEGKIIAFCTLMPTYYNEAISVDLIRWLPELDLPLMDGLYLHMLLWGKEKGYKAFNMGMATLSNVGQLDYSYLRERIAGRVFEHFNGLYRFQGLRRYKEKYSPQWEPRFLVYRKDSSLWYSMLKVMRVIRHK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 333245 335767 . - 0 GCA_005502385.1_00862 GCA_005502385.1_00862_gene,GCA_005502385.1_00862_mRNA GCA_005502385.1_00862 Phosphatidylglycerol lysyltransferase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTEEHKNRLISILKVVFAVTLFIVVVATLYHELSHINFKQTLEAFSKINRWFLIGLFICGGASMLLLSLYDVILVKTLKLSIPLNKVFRLSYIINAFNAIVGFGGFIGAGFRTFIYKNYTSDRKRLLHAISIILVSMLTGLSFLSILVVLHIFDASHILDKVRFVKWVLYVVALFLPIFIVYTVVKPVTEHNKLVGIYCTLVSSIEWIAAAVVLYLSAWMIDIHVAFTTLLGIFIIAALSGLISFIPGGFGAFDLVVLLGLKSLDIPEEKILIALLLYRFAYYFVPVIIALILSTFEFGNSARKYFEESKYFVPAKDVTSFILSYQKDIISKIPAFALSILALLTSFIFFINNVTIVYDGLYDADHFIYYIMLSIHTSACLILLVNVRGIYKQSKRAIMYSTISLVLIFLATLYTYASIMLLTWLIIIFILLILAYRRAKVFKRPFRLKNLIFTLIISVIVLYINHFIISETLYALDLYHLEMDTSLLKYYFWLTVVVVILLIVGIAWLFGRRFERPHQFQEFSQCKSIIETYGGNYLSHLIYSGDKDVFMHDSEQAFLMYRYKSNALVVLGDPIGNTASFQSLLDDFYSYAEKLGYDVIFYQVSDRFMPLYHNFGNQFFKLGEEAIIDLTQFTTSGKKRRGFRATLNKFNDLNIKFEIIEPPFSKAFIEELRKVSDKWLDGRTEMHFSVGQFTEQYLDKAPIGIMKNEEGKIIAFCTLMPTYYNEAISVDLIRWLPELDLPLMDGLYLHMLLWGKEKGYKAFNMGMATLSNVGQLDYSYLRERIAGRVFEHFNGLYRFQGLRRYKEKYSPQWEPRFLVYRKDSSLWYSMLKVMRVIRHK persistent 840 mprF bifunctional lysylphosphatidylglycerol flippase/synthetase MprF 2.3.2.3 WP_070663356.1 UPI0008A5C417 UniRef100_UPI0008A5C417,UniRef50_Q2G2M2,UniRef90_A0A3S7GSJ3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 335977 337206 . - . GCA_005502385.1_00863_gene GCA_005502385.1_00863 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSMDHKKDEGKKANKLSFSETRFMKFLGGKDLLFALVSLVLLGITIFIFDKISYVFQPFVIIFNTIAAPIILSLILYYLLNPVINLMERYNIPRLLAIIIVFLVIIGGATLIIDLLIPVIGDQIKQLASNFPKYIEKFNRAIDKVTHMSILSSFYNQIQEWLDSTSKKIPSLTSDYFSGFGTKIRTFAEAIVNVGVVIATTPFVLFFMLKDGTKFRDYTTKIMPPKFRKDYHDLLEKMSVQVGSYIQGQIIVSFCIGILLFIGYSIIGLDYGLVLASIAAVTSVVPYLGPTIAISPAIIIAIITSPFMLLKLIIVWTLVQFIEGHFISPNIMGKTLKIHPLTIIFILLSAGNLLGIVGVILGIPGYAILKVLVSHIFLLFKRRYNKYYGDDAGQYEMKKEEHKDYTESE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 335977 337206 . - . GCA_005502385.1_00863_mRNA GCA_005502385.1_00863 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSMDHKKDEGKKANKLSFSETRFMKFLGGKDLLFALVSLVLLGITIFIFDKISYVFQPFVIIFNTIAAPIILSLILYYLLNPVINLMERYNIPRLLAIIIVFLVIIGGATLIIDLLIPVIGDQIKQLASNFPKYIEKFNRAIDKVTHMSILSSFYNQIQEWLDSTSKKIPSLTSDYFSGFGTKIRTFAEAIVNVGVVIATTPFVLFFMLKDGTKFRDYTTKIMPPKFRKDYHDLLEKMSVQVGSYIQGQIIVSFCIGILLFIGYSIIGLDYGLVLASIAAVTSVVPYLGPTIAISPAIIIAIITSPFMLLKLIIVWTLVQFIEGHFISPNIMGKTLKIHPLTIIFILLSAGNLLGIVGVILGIPGYAILKVLVSHIFLLFKRRYNKYYGDDAGQYEMKKEEHKDYTESE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 335977 337206 . - 0 GCA_005502385.1_00863 GCA_005502385.1_00863_gene,GCA_005502385.1_00863_mRNA GCA_005502385.1_00863 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSMDHKKDEGKKANKLSFSETRFMKFLGGKDLLFALVSLVLLGITIFIFDKISYVFQPFVIIFNTIAAPIILSLILYYLLNPVINLMERYNIPRLLAIIIVFLVIIGGATLIIDLLIPVIGDQIKQLASNFPKYIEKFNRAIDKVTHMSILSSFYNQIQEWLDSTSKKIPSLTSDYFSGFGTKIRTFAEAIVNVGVVIATTPFVLFFMLKDGTKFRDYTTKIMPPKFRKDYHDLLEKMSVQVGSYIQGQIIVSFCIGILLFIGYSIIGLDYGLVLASIAAVTSVVPYLGPTIAISPAIIIAIITSPFMLLKLIIVWTLVQFIEGHFISPNIMGKTLKIHPLTIIFILLSAGNLLGIVGVILGIPGYAILKVLVSHIFLLFKRRYNKYYGDDAGQYEMKKEEHKDYTESE persistent 409 AI-2E family transporter WP_137689495.1 UPI0010F7822C UniRef100_UPI0010F7822C,UniRef50_S2XJ07,UniRef90_A0A3S7GSU9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 337270 338127 . - . GCA_005502385.1_00864_gene GCA_005502385.1_00864 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMSKYHISKILNNNVIICINSNQEVILIGKGIGFNKKPGMVVNDNASIEKVYKLDQKQQQEYYKSLVEIADEEVLQAIIESVNYITSTTYMKDDKQLVIALTDHITFAYKRLKQNQIISNPFAMETKHLYSEAYDIATQVIQRLNEKLDVTFPDDEIGFIALHIASNKEDLPMSEISLINKMISKCVLIIENDIGYPVNPRTVQYQRFIRHIQFLIRRLNKKEYVHAQDEFINMVKTYYPNCYSTAYKISKVIQKDLDIDIDDSEIVYLALHIYHFQSQNNTQNE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 337270 338127 . - . GCA_005502385.1_00864_mRNA GCA_005502385.1_00864 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMSKYHISKILNNNVIICINSNQEVILIGKGIGFNKKPGMVVNDNASIEKVYKLDQKQQQEYYKSLVEIADEEVLQAIIESVNYITSTTYMKDDKQLVIALTDHITFAYKRLKQNQIISNPFAMETKHLYSEAYDIATQVIQRLNEKLDVTFPDDEIGFIALHIASNKEDLPMSEISLINKMISKCVLIIENDIGYPVNPRTVQYQRFIRHIQFLIRRLNKKEYVHAQDEFINMVKTYYPNCYSTAYKISKVIQKDLDIDIDDSEIVYLALHIYHFQSQNNTQNE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 337270 338127 . - 0 GCA_005502385.1_00864 GCA_005502385.1_00864_gene,GCA_005502385.1_00864_mRNA GCA_005502385.1_00864 GlcA/glcB genes antiterminator GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMSKYHISKILNNNVIICINSNQEVILIGKGIGFNKKPGMVVNDNASIEKVYKLDQKQQQEYYKSLVEIADEEVLQAIIESVNYITSTTYMKDDKQLVIALTDHITFAYKRLKQNQIISNPFAMETKHLYSEAYDIATQVIQRLNEKLDVTFPDDEIGFIALHIASNKEDLPMSEISLINKMISKCVLIIENDIGYPVNPRTVQYQRFIRHIQFLIRRLNKKEYVHAQDEFINMVKTYYPNCYSTAYKISKVIQKDLDIDIDDSEIVYLALHIYHFQSQNNTQNE persistent 285 glcT glucose PTS transporter transcription antiterminator GlcT UniRef50_O33618,UniRef90_A0A1L8Y9I8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 338254 339714 . - . GCA_005502385.1_00865_gene GCA_005502385.1_00865 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRDFDSLIPDWFKSVVQVGNDLIWSQYLIGLLLTVGIFFTISSKFVQLRMLPEMFRALVEKPETLKNGEKGISPFQAFAISAGSRVGTGNIAGVATAIVLGGPGAVFWMWIIAFIGAASAFIEATLAQVYKVHDKEGGFRGGPAYYITKGLNQKWLGITFAVLITVTFAFVFNTVQSNTIAESLRTQYHISPVITGIILAVITAIIIFGGVRSIATLSSLIVPIMAIVYIGIVLVILLMNFDQIIPMIGTIIKSAFGIEQVAGGAVGTAILQGIKRGLFSNEAGMGSAPNAAATAAVPHPVKQGLLQSLGVFFDTMLVCTATAIMILLYSGLKFGEKAPQGVEVTQSALNEHLGSPGGIFLTVAITLFAFSSVVGNYYYGQSNIEFLSKNKAILFIFRCLVVVLVFIGAVVKTETVWSTADLFMGLMAIVNLVSIIGLSNIAFAVMKDYIQQKRAGLKPVFKPENLEINLFGIESWGREDKISKKH . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 338254 339714 . - . GCA_005502385.1_00865_mRNA GCA_005502385.1_00865 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRDFDSLIPDWFKSVVQVGNDLIWSQYLIGLLLTVGIFFTISSKFVQLRMLPEMFRALVEKPETLKNGEKGISPFQAFAISAGSRVGTGNIAGVATAIVLGGPGAVFWMWIIAFIGAASAFIEATLAQVYKVHDKEGGFRGGPAYYITKGLNQKWLGITFAVLITVTFAFVFNTVQSNTIAESLRTQYHISPVITGIILAVITAIIIFGGVRSIATLSSLIVPIMAIVYIGIVLVILLMNFDQIIPMIGTIIKSAFGIEQVAGGAVGTAILQGIKRGLFSNEAGMGSAPNAAATAAVPHPVKQGLLQSLGVFFDTMLVCTATAIMILLYSGLKFGEKAPQGVEVTQSALNEHLGSPGGIFLTVAITLFAFSSVVGNYYYGQSNIEFLSKNKAILFIFRCLVVVLVFIGAVVKTETVWSTADLFMGLMAIVNLVSIIGLSNIAFAVMKDYIQQKRAGLKPVFKPENLEINLFGIESWGREDKISKKH . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 338254 339714 . - 0 GCA_005502385.1_00865 GCA_005502385.1_00865_gene,GCA_005502385.1_00865_mRNA GCA_005502385.1_00865 Amino-acid carrier protein AlsT GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRDFDSLIPDWFKSVVQVGNDLIWSQYLIGLLLTVGIFFTISSKFVQLRMLPEMFRALVEKPETLKNGEKGISPFQAFAISAGSRVGTGNIAGVATAIVLGGPGAVFWMWIIAFIGAASAFIEATLAQVYKVHDKEGGFRGGPAYYITKGLNQKWLGITFAVLITVTFAFVFNTVQSNTIAESLRTQYHISPVITGIILAVITAIIIFGGVRSIATLSSLIVPIMAIVYIGIVLVILLMNFDQIIPMIGTIIKSAFGIEQVAGGAVGTAILQGIKRGLFSNEAGMGSAPNAAATAAVPHPVKQGLLQSLGVFFDTMLVCTATAIMILLYSGLKFGEKAPQGVEVTQSALNEHLGSPGGIFLTVAITLFAFSSVVGNYYYGQSNIEFLSKNKAILFIFRCLVVVLVFIGAVVKTETVWSTADLFMGLMAIVNLVSIIGLSNIAFAVMKDYIQQKRAGLKPVFKPENLEINLFGIESWGREDKISKKH persistent 486 Alanine:cation symporter family protein WP_070663359.1 UPI0008A4FE6C UniRef100_UPI0008A4FE6C,UniRef50_A0A078M5B3,UniRef90_A0A4Q9WUF4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 339924 342323 . - . GCA_005502385.1_00866_gene GCA_005502385.1_00866 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSEIIQDLSLEDVIGDRFGRYSKYIIQERALPDVRDGLKPVQRRILFAMYSSGNTYDKNFRKSAKTVGDVIGQYHPHGDSSVYDAMVRLSQDWKLRHVLIEMHGNNGSIDNDPPAAMRYTEAKLSQLSEELVRDINKETVSFVPNYDDTTLEPIVLPARFPNLLVNGSTGISAGYATDIPPHNLGEVIQATLKYIDHPNISVNQLMKYIKGPDFPTGGIIQGIDGIKKAYETGKGKIVVRSKVEEEALRNGRKQLIVTEIPYEVNKSSLVKRIDELRADKKVDGIIEVRDETDRTGLRIAIELKKDVNSESIKNYLYKNSDLQITYNFNMVAISDGRPKLMGLREIIDSYLNHQIEVVANRTKYDLNHAEKRMHIVEGLMKALSILDEVIALIRHSKNKKDAKDNLVKEFDFTEAQAEAIVMLQLYRLTNTDIVALEEEHEELQKLIEEYRNILDNHDALLNVIKKELTEIRKRFKTSRLSSIEAEISEIKIDKEVIVPSEEVVLSVTRHGYIKRTSTRSFNASGVTEVGLKEGDSLLKYQTVNTQDTALVFTNKGRYLFIPIHKIADVRWKELGQHVSQIVPLEENERIIDVFNEKTFDGKAFYVIATRNGMIKKSNQSLFKTTRFNKPLIATKLKNEDEVVNVLRITQEQMITVITHKGMSLTYSTEELSDTGLRAAGVKSINLKDEDYVIMTDTVDKNSSIIMATQRGAIKRIAKDILQDAKRAQRGITLLKELKKNPHRIVAAYVVRDETYYTLYSDKHAETGEISNIHLSEQYTNGSFVVDTNEFGNVKSMIIN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 339924 342323 . - . GCA_005502385.1_00866_mRNA GCA_005502385.1_00866 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSEIIQDLSLEDVIGDRFGRYSKYIIQERALPDVRDGLKPVQRRILFAMYSSGNTYDKNFRKSAKTVGDVIGQYHPHGDSSVYDAMVRLSQDWKLRHVLIEMHGNNGSIDNDPPAAMRYTEAKLSQLSEELVRDINKETVSFVPNYDDTTLEPIVLPARFPNLLVNGSTGISAGYATDIPPHNLGEVIQATLKYIDHPNISVNQLMKYIKGPDFPTGGIIQGIDGIKKAYETGKGKIVVRSKVEEEALRNGRKQLIVTEIPYEVNKSSLVKRIDELRADKKVDGIIEVRDETDRTGLRIAIELKKDVNSESIKNYLYKNSDLQITYNFNMVAISDGRPKLMGLREIIDSYLNHQIEVVANRTKYDLNHAEKRMHIVEGLMKALSILDEVIALIRHSKNKKDAKDNLVKEFDFTEAQAEAIVMLQLYRLTNTDIVALEEEHEELQKLIEEYRNILDNHDALLNVIKKELTEIRKRFKTSRLSSIEAEISEIKIDKEVIVPSEEVVLSVTRHGYIKRTSTRSFNASGVTEVGLKEGDSLLKYQTVNTQDTALVFTNKGRYLFIPIHKIADVRWKELGQHVSQIVPLEENERIIDVFNEKTFDGKAFYVIATRNGMIKKSNQSLFKTTRFNKPLIATKLKNEDEVVNVLRITQEQMITVITHKGMSLTYSTEELSDTGLRAAGVKSINLKDEDYVIMTDTVDKNSSIIMATQRGAIKRIAKDILQDAKRAQRGITLLKELKKNPHRIVAAYVVRDETYYTLYSDKHAETGEISNIHLSEQYTNGSFVVDTNEFGNVKSMIIN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 339924 342323 . - 0 GCA_005502385.1_00866 GCA_005502385.1_00866_gene,GCA_005502385.1_00866_mRNA GCA_005502385.1_00866 DNA topoisomerase 4 subunit A GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSEIIQDLSLEDVIGDRFGRYSKYIIQERALPDVRDGLKPVQRRILFAMYSSGNTYDKNFRKSAKTVGDVIGQYHPHGDSSVYDAMVRLSQDWKLRHVLIEMHGNNGSIDNDPPAAMRYTEAKLSQLSEELVRDINKETVSFVPNYDDTTLEPIVLPARFPNLLVNGSTGISAGYATDIPPHNLGEVIQATLKYIDHPNISVNQLMKYIKGPDFPTGGIIQGIDGIKKAYETGKGKIVVRSKVEEEALRNGRKQLIVTEIPYEVNKSSLVKRIDELRADKKVDGIIEVRDETDRTGLRIAIELKKDVNSESIKNYLYKNSDLQITYNFNMVAISDGRPKLMGLREIIDSYLNHQIEVVANRTKYDLNHAEKRMHIVEGLMKALSILDEVIALIRHSKNKKDAKDNLVKEFDFTEAQAEAIVMLQLYRLTNTDIVALEEEHEELQKLIEEYRNILDNHDALLNVIKKELTEIRKRFKTSRLSSIEAEISEIKIDKEVIVPSEEVVLSVTRHGYIKRTSTRSFNASGVTEVGLKEGDSLLKYQTVNTQDTALVFTNKGRYLFIPIHKIADVRWKELGQHVSQIVPLEENERIIDVFNEKTFDGKAFYVIATRNGMIKKSNQSLFKTTRFNKPLIATKLKNEDEVVNVLRITQEQMITVITHKGMSLTYSTEELSDTGLRAAGVKSINLKDEDYVIMTDTVDKNSSIIMATQRGAIKRIAKDILQDAKRAQRGITLLKELKKNPHRIVAAYVVRDETYYTLYSDKHAETGEISNIHLSEQYTNGSFVVDTNEFGNVKSMIIN persistent 799 parC DNA topoisomerase IV subunit A 5.6.2.2 GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0006265 UniRef50_P72525,UniRef90_I7KMS5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 342320 344320 . - . GCA_005502385.1_00867_gene GCA_005502385.1_00867 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVTKMTNHYSDDSIQVLEGLEAVRKRPGMYIGSTDKRGLHHLVYEIVDNSVDEVLNGYGNEIDVTINKDNSISVEDNGRGMPTGMHASGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVVNALSEWLEVEIHRDGQIYKQSFKDGGIPTSGLVKAGKTKKTGTKVTFKPDSSIFKATTSFNFDTLSERLQESAFLLKNLKITLKDLRDGKEREDVYHYEEGIKEFVSYINEGKEVLHDVTTFTGAANGIEVDVAFQYNDQYSESILSFVNNVRTKDGGTHEVGFKTAMTRVFNDYARRINELKDKDKNLDGNDIREGLTAVISVRIPEELLQFEGQTKSKLGTSEARSAVDSVVSEKLPYYLEEKGQLSKSLVKKAIKAQQAREAARKAREDARSGKKNKRKDTLLSGKLTPAQSKNTEKNELYLVEGDSAGGSAKLGRDRKFQAILPLRGKVINTEKAKLEDIFKNEEINTIIHTIGAGVGNDFKLEDSNYNRVIIMTDADTDGAHIQVLLLTFFFKYMRPLVQAGRVFIALPPLYKLEKGKGKSKKVEYAWTDDELEKLQKQLGKGLILQRYKGLGEMNPEQLWETTMNPETRTLIRVQIDDEVRSSKRVTTLMGDKVAPRREWIENHVEFGMQEDQSILDNTEVQILDTEEYDEEEVN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 342320 344320 . - . GCA_005502385.1_00867_mRNA GCA_005502385.1_00867 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVTKMTNHYSDDSIQVLEGLEAVRKRPGMYIGSTDKRGLHHLVYEIVDNSVDEVLNGYGNEIDVTINKDNSISVEDNGRGMPTGMHASGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVVNALSEWLEVEIHRDGQIYKQSFKDGGIPTSGLVKAGKTKKTGTKVTFKPDSSIFKATTSFNFDTLSERLQESAFLLKNLKITLKDLRDGKEREDVYHYEEGIKEFVSYINEGKEVLHDVTTFTGAANGIEVDVAFQYNDQYSESILSFVNNVRTKDGGTHEVGFKTAMTRVFNDYARRINELKDKDKNLDGNDIREGLTAVISVRIPEELLQFEGQTKSKLGTSEARSAVDSVVSEKLPYYLEEKGQLSKSLVKKAIKAQQAREAARKAREDARSGKKNKRKDTLLSGKLTPAQSKNTEKNELYLVEGDSAGGSAKLGRDRKFQAILPLRGKVINTEKAKLEDIFKNEEINTIIHTIGAGVGNDFKLEDSNYNRVIIMTDADTDGAHIQVLLLTFFFKYMRPLVQAGRVFIALPPLYKLEKGKGKSKKVEYAWTDDELEKLQKQLGKGLILQRYKGLGEMNPEQLWETTMNPETRTLIRVQIDDEVRSSKRVTTLMGDKVAPRREWIENHVEFGMQEDQSILDNTEVQILDTEEYDEEEVN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 342320 344320 . - 0 GCA_005502385.1_00867 GCA_005502385.1_00867_gene,GCA_005502385.1_00867_mRNA GCA_005502385.1_00867 DNA topoisomerase 4 subunit B GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVTKMTNHYSDDSIQVLEGLEAVRKRPGMYIGSTDKRGLHHLVYEIVDNSVDEVLNGYGNEIDVTINKDNSISVEDNGRGMPTGMHASGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVVNALSEWLEVEIHRDGQIYKQSFKDGGIPTSGLVKAGKTKKTGTKVTFKPDSSIFKATTSFNFDTLSERLQESAFLLKNLKITLKDLRDGKEREDVYHYEEGIKEFVSYINEGKEVLHDVTTFTGAANGIEVDVAFQYNDQYSESILSFVNNVRTKDGGTHEVGFKTAMTRVFNDYARRINELKDKDKNLDGNDIREGLTAVISVRIPEELLQFEGQTKSKLGTSEARSAVDSVVSEKLPYYLEEKGQLSKSLVKKAIKAQQAREAARKAREDARSGKKNKRKDTLLSGKLTPAQSKNTEKNELYLVEGDSAGGSAKLGRDRKFQAILPLRGKVINTEKAKLEDIFKNEEINTIIHTIGAGVGNDFKLEDSNYNRVIIMTDADTDGAHIQVLLLTFFFKYMRPLVQAGRVFIALPPLYKLEKGKGKSKKVEYAWTDDELEKLQKQLGKGLILQRYKGLGEMNPEQLWETTMNPETRTLIRVQIDDEVRSSKRVTTLMGDKVAPRREWIENHVEFGMQEDQSILDNTEVQILDTEEYDEEEVN persistent 666 parE DNA topoisomerase IV subunit B 5.6.2.2 GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0006265,GO:0007059,GO:0034335,GO:0046872 COG0187,L UniRef50_Q59961,UniRef90_Q2FYS5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 344525 345133 . + . GCA_005502385.1_00868_gene GCA_005502385.1_00868 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMIVLMLILSYLIGAIPNGYVIGKVFFKKDIREFGSGNTGATNSFRVLGKPAGFIVTFLDIFKGFITVFFPLWFPVHAHGPISTFFTHGLIVGIFAIIGHVYPIYLKFKGGKAVATSAGVVLGVNPILLLILAVIFFGILYLTKYVSLSSIIAAISCVIGSLIIHDYILFGMSAFVSIILIFRHRSNIVRIFKGEEPKIKWM . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 344525 345133 . + . GCA_005502385.1_00868_mRNA GCA_005502385.1_00868 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMIVLMLILSYLIGAIPNGYVIGKVFFKKDIREFGSGNTGATNSFRVLGKPAGFIVTFLDIFKGFITVFFPLWFPVHAHGPISTFFTHGLIVGIFAIIGHVYPIYLKFKGGKAVATSAGVVLGVNPILLLILAVIFFGILYLTKYVSLSSIIAAISCVIGSLIIHDYILFGMSAFVSIILIFRHRSNIVRIFKGEEPKIKWM . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 344525 345133 . + 0 GCA_005502385.1_00868 GCA_005502385.1_00868_gene,GCA_005502385.1_00868_mRNA GCA_005502385.1_00868 Glycerol-3-phosphate acyltransferase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MMIVLMLILSYLIGAIPNGYVIGKVFFKKDIREFGSGNTGATNSFRVLGKPAGFIVTFLDIFKGFITVFFPLWFPVHAHGPISTFFTHGLIVGIFAIIGHVYPIYLKFKGGKAVATSAGVVLGVNPILLLILAVIFFGILYLTKYVSLSSIIAAISCVIGSLIIHDYILFGMSAFVSIILIFRHRSNIVRIFKGEEPKIKWM persistent 202 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 2.3.1.15,2.3.1.275 GO:0005886,GO:0006654,GO:0008374,GO:0008654,GO:0043772 COG0344,I WP_070672422.1 UPI0008A142B7 UniRef100_UPI0008A142B7,UniRef50_Q2FYS6,UniRef90_Q4L661 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 345292 345591 . + . GCA_005502385.1_00869_gene GCA_005502385.1_00869 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKINLTDEAVEWFKNELDLPEENKVLQFYVRYGGEFQLKQGFSPAFRVESSNDVEIGYHENYNDLIVVVSEDDLWYFEDHEVLVEKVDHEDEIVYSTTN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 345292 345591 . + . GCA_005502385.1_00869_mRNA GCA_005502385.1_00869 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKINLTDEAVEWFKNELDLPEENKVLQFYVRYGGEFQLKQGFSPAFRVESSNDVEIGYHENYNDLIVVVSEDDLWYFEDHEVLVEKVDHEDEIVYSTTN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 345292 345591 . + 0 GCA_005502385.1_00869 GCA_005502385.1_00869_gene,GCA_005502385.1_00869_mRNA GCA_005502385.1_00869 putative protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKINLTDEAVEWFKNELDLPEENKVLQFYVRYGGEFQLKQGFSPAFRVESSNDVEIGYHENYNDLIVVVSEDDLWYFEDHEVLVEKVDHEDEIVYSTTN persistent 99 HesB/YadR/YfhF family protein WP_071859406.1 UPI0009003C2C UniRef100_A0AAE5N013,UniRef50_Q2FYS7,UniRef90_A0A6N0I482 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 345640 346110 . - . GCA_005502385.1_00870_gene GCA_005502385.1_00870 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIYSMTEIEARYQETDKMGVIYHGNYATWFEVARTDYIRKLGFSYADMEKEGIISPVVDLQVQYKKSIFYPEKVKVKTWVEHYSRLRSTYCYEVYNEKGELATTGSTQLLCIKASDFRPIRLDRYFPEWHQVYSEVEALNNEGKELEVTQRSDLNI . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 345640 346110 . - . GCA_005502385.1_00870_mRNA GCA_005502385.1_00870 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIYSMTEIEARYQETDKMGVIYHGNYATWFEVARTDYIRKLGFSYADMEKEGIISPVVDLQVQYKKSIFYPEKVKVKTWVEHYSRLRSTYCYEVYNEKGELATTGSTQLLCIKASDFRPIRLDRYFPEWHQVYSEVEALNNEGKELEVTQRSDLNI . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 345640 346110 . - 0 GCA_005502385.1_00870 GCA_005502385.1_00870_gene,GCA_005502385.1_00870_mRNA GCA_005502385.1_00870 1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIYSMTEIEARYQETDKMGVIYHGNYATWFEVARTDYIRKLGFSYADMEKEGIISPVVDLQVQYKKSIFYPEKVKVKTWVEHYSRLRSTYCYEVYNEKGELATTGSTQLLCIKASDFRPIRLDRYFPEWHQVYSEVEALNNEGKELEVTQRSDLNI persistent 156 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase MenI 3.1.2.-,3.1.2.28 GO:0009234 WP_017174672.1 UPI0002DE5E9E UniRef100_A0A533IXR2,UniRef50_Q2FYS8,UniRef90_A0A533IXR2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 346306 349011 . - . GCA_005502385.1_00871_gene GCA_005502385.1_00871 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTSNIKEQAKKSFEVRGKSYTYYDLKSLEEQGLTKISKLPYSIRVLLESVLRQEDDFVITDDHIKALAHFGKEGNEGEVPFKPSRVILQDFTGVPAVVDLASLRKAMNDVGGDINKINPEVPVDLVIDHSVQVDSYANPRALERNMKLEFERNYERYQFLNWATKAFNNYNAVPPATGIVHQVNLEYLAKVVHVRDVDGEQTAFPDTLVGTDSHTTMINGIGVLGWGVGGIEAEAGMLGQPSYFPIPEVIGVRLTNSLPQGSTATDLALRVTQELRKKGVVGKFIEFFGPGVADLPLADRATIANMAPEYGATCGFFPVDEESLKYMKLTGRSEEHVELVKAYLQQNNMFFTSDKEDPQYTDVINLDLSTVEASLSGPKRPQDLIFLSDMKKEFEKSVTAPAGNQGHGLDQSEFDKSAHIQFNDGSETTMKTGDIAIAAITSCTNTSNPYVMLGAGLVAKKAVEKGLKVPEYVKTSLAPGSKVVTGYLRDSGLQKYLDDLGFNLVGYGCTTCIGNSGPLLPEIEKAIAKEDLLVTSVLSGNRNFEGRIHPLVKANYLASPQLVVAYALAGTVDIDLQNEPLGKGKDGQDVYLNDIWPSIKEVADTVDSVVTPELFKEEYKNVYNNNEMWNEIDVTDSPLYDFDPNSTYIQNPTFFQGLSKKPGTIEPLKDLRVMGKFGNSVTTDHISPAGAIGKDTPAGKYLLNHDVPIRDFNSYGSRRGNHEVMVRGTFANIRIKNQLAPGTEGGFTTYWPTDEIMPIYDAAMKYKEDGTGLAVLAGNDYGMGSSRDWAAKGTNLLGVKTVIAQSYERIHRSNLVMMGVLPLQFKDGESADSLGLNGREEISVDINEDVQPHDIIKVHAKKENGEVVDFDVIVRFDSQVEIDYYRHGGILQMVLRNKLAQ . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 346306 349011 . - . GCA_005502385.1_00871_mRNA GCA_005502385.1_00871 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTSNIKEQAKKSFEVRGKSYTYYDLKSLEEQGLTKISKLPYSIRVLLESVLRQEDDFVITDDHIKALAHFGKEGNEGEVPFKPSRVILQDFTGVPAVVDLASLRKAMNDVGGDINKINPEVPVDLVIDHSVQVDSYANPRALERNMKLEFERNYERYQFLNWATKAFNNYNAVPPATGIVHQVNLEYLAKVVHVRDVDGEQTAFPDTLVGTDSHTTMINGIGVLGWGVGGIEAEAGMLGQPSYFPIPEVIGVRLTNSLPQGSTATDLALRVTQELRKKGVVGKFIEFFGPGVADLPLADRATIANMAPEYGATCGFFPVDEESLKYMKLTGRSEEHVELVKAYLQQNNMFFTSDKEDPQYTDVINLDLSTVEASLSGPKRPQDLIFLSDMKKEFEKSVTAPAGNQGHGLDQSEFDKSAHIQFNDGSETTMKTGDIAIAAITSCTNTSNPYVMLGAGLVAKKAVEKGLKVPEYVKTSLAPGSKVVTGYLRDSGLQKYLDDLGFNLVGYGCTTCIGNSGPLLPEIEKAIAKEDLLVTSVLSGNRNFEGRIHPLVKANYLASPQLVVAYALAGTVDIDLQNEPLGKGKDGQDVYLNDIWPSIKEVADTVDSVVTPELFKEEYKNVYNNNEMWNEIDVTDSPLYDFDPNSTYIQNPTFFQGLSKKPGTIEPLKDLRVMGKFGNSVTTDHISPAGAIGKDTPAGKYLLNHDVPIRDFNSYGSRRGNHEVMVRGTFANIRIKNQLAPGTEGGFTTYWPTDEIMPIYDAAMKYKEDGTGLAVLAGNDYGMGSSRDWAAKGTNLLGVKTVIAQSYERIHRSNLVMMGVLPLQFKDGESADSLGLNGREEISVDINEDVQPHDIIKVHAKKENGEVVDFDVIVRFDSQVEIDYYRHGGILQMVLRNKLAQ . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 346306 349011 . - 0 GCA_005502385.1_00871 GCA_005502385.1_00871_gene,GCA_005502385.1_00871_mRNA GCA_005502385.1_00871 Aconitate hydratase A GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTSNIKEQAKKSFEVRGKSYTYYDLKSLEEQGLTKISKLPYSIRVLLESVLRQEDDFVITDDHIKALAHFGKEGNEGEVPFKPSRVILQDFTGVPAVVDLASLRKAMNDVGGDINKINPEVPVDLVIDHSVQVDSYANPRALERNMKLEFERNYERYQFLNWATKAFNNYNAVPPATGIVHQVNLEYLAKVVHVRDVDGEQTAFPDTLVGTDSHTTMINGIGVLGWGVGGIEAEAGMLGQPSYFPIPEVIGVRLTNSLPQGSTATDLALRVTQELRKKGVVGKFIEFFGPGVADLPLADRATIANMAPEYGATCGFFPVDEESLKYMKLTGRSEEHVELVKAYLQQNNMFFTSDKEDPQYTDVINLDLSTVEASLSGPKRPQDLIFLSDMKKEFEKSVTAPAGNQGHGLDQSEFDKSAHIQFNDGSETTMKTGDIAIAAITSCTNTSNPYVMLGAGLVAKKAVEKGLKVPEYVKTSLAPGSKVVTGYLRDSGLQKYLDDLGFNLVGYGCTTCIGNSGPLLPEIEKAIAKEDLLVTSVLSGNRNFEGRIHPLVKANYLASPQLVVAYALAGTVDIDLQNEPLGKGKDGQDVYLNDIWPSIKEVADTVDSVVTPELFKEEYKNVYNNNEMWNEIDVTDSPLYDFDPNSTYIQNPTFFQGLSKKPGTIEPLKDLRVMGKFGNSVTTDHISPAGAIGKDTPAGKYLLNHDVPIRDFNSYGSRRGNHEVMVRGTFANIRIKNQLAPGTEGGFTTYWPTDEIMPIYDAAMKYKEDGTGLAVLAGNDYGMGSSRDWAAKGTNLLGVKTVIAQSYERIHRSNLVMMGVLPLQFKDGESADSLGLNGREEISVDINEDVQPHDIIKVHAKKENGEVVDFDVIVRFDSQVEIDYYRHGGILQMVLRNKLAQ persistent 901 acnA aconitate hydratase AcnA 4.2.1.3,4.2.1.99 GO:0003994,GO:0006099 C,COG1048 UniRef50_Q54X73,UniRef90_A0A5B2Z2U0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 349384 351030 . - . GCA_005502385.1_00872_gene GCA_005502385.1_00872 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNSSSESSKKGKKFSPVFIYSAIIVAIIVLIGAIVPEQFDSITSSISGWITDKLGWYYLILTTIIVFFCVFLIFSPIGKLKLGKPDDKPEFNTISWFAMLFSAGMGIGLVFYGAAEPMSHFAAPPTASPKTTEAFTESLRSTFFHWGFHAWAVYGVVALALAYAQFRKDEPGLVSRTLRPLLGDKVEGPIGTIIDVLSVFATVVGVAVSLGMGALQINGGLNYLFGVPNNVWVQSIIIVVVTILFIISAWSGLSKGIQYLSNANIGLGTILMIVALIVGPTVLILNMFTSSIGSLFNTFLFNSFDTAALNSQKREWMSSWTLYYWGWWLSWSPFVGVFIARVSKGRSIREFISGVLLVPALVSFLWFSVFGVLGIEMGKKHSELFKMSAETQLFGVFNHLPLGMILSLVALILIGSFFITSADSATFVLGMQTTYGSLEPSNVVKVTWGIAQSLIAFILLLAGGGDGAEALGALQSAAIISALPFSFVVILMMISFYKDANQERKFLGLTLQPNKHRLKEYIEYQQKDYESDILEKRQNRRNAEKAEQ . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 349384 351030 . - . GCA_005502385.1_00872_mRNA GCA_005502385.1_00872 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNSSSESSKKGKKFSPVFIYSAIIVAIIVLIGAIVPEQFDSITSSISGWITDKLGWYYLILTTIIVFFCVFLIFSPIGKLKLGKPDDKPEFNTISWFAMLFSAGMGIGLVFYGAAEPMSHFAAPPTASPKTTEAFTESLRSTFFHWGFHAWAVYGVVALALAYAQFRKDEPGLVSRTLRPLLGDKVEGPIGTIIDVLSVFATVVGVAVSLGMGALQINGGLNYLFGVPNNVWVQSIIIVVVTILFIISAWSGLSKGIQYLSNANIGLGTILMIVALIVGPTVLILNMFTSSIGSLFNTFLFNSFDTAALNSQKREWMSSWTLYYWGWWLSWSPFVGVFIARVSKGRSIREFISGVLLVPALVSFLWFSVFGVLGIEMGKKHSELFKMSAETQLFGVFNHLPLGMILSLVALILIGSFFITSADSATFVLGMQTTYGSLEPSNVVKVTWGIAQSLIAFILLLAGGGDGAEALGALQSAAIISALPFSFVVILMMISFYKDANQERKFLGLTLQPNKHRLKEYIEYQQKDYESDILEKRQNRRNAEKAEQ . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 349384 351030 . - 0 GCA_005502385.1_00872 GCA_005502385.1_00872_gene,GCA_005502385.1_00872_mRNA GCA_005502385.1_00872 Glycine betaine transporter OpuD GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNSSSESSKKGKKFSPVFIYSAIIVAIIVLIGAIVPEQFDSITSSISGWITDKLGWYYLILTTIIVFFCVFLIFSPIGKLKLGKPDDKPEFNTISWFAMLFSAGMGIGLVFYGAAEPMSHFAAPPTASPKTTEAFTESLRSTFFHWGFHAWAVYGVVALALAYAQFRKDEPGLVSRTLRPLLGDKVEGPIGTIIDVLSVFATVVGVAVSLGMGALQINGGLNYLFGVPNNVWVQSIIIVVVTILFIISAWSGLSKGIQYLSNANIGLGTILMIVALIVGPTVLILNMFTSSIGSLFNTFLFNSFDTAALNSQKREWMSSWTLYYWGWWLSWSPFVGVFIARVSKGRSIREFISGVLLVPALVSFLWFSVFGVLGIEMGKKHSELFKMSAETQLFGVFNHLPLGMILSLVALILIGSFFITSADSATFVLGMQTTYGSLEPSNVVKVTWGIAQSLIAFILLLAGGGDGAEALGALQSAAIISALPFSFVVILMMISFYKDANQERKFLGLTLQPNKHRLKEYIEYQQKDYESDILEKRQNRRNAEKAEQ persistent 548 BCCT family transporter UniRef50_A0A1D4R1U3,UniRef90_A0A1J6DNA3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 351246 351602 . + . GCA_005502385.1_00873_gene GCA_005502385.1_00873 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLKEFKEFAFKGNVLDLAIAVVIGAAFNKIVSSLVTYIIMPLIGKLFGSVDFAKDWQLWGIKYGLFIQSIIDFIIVAFALFIFVKIANTIMRKEEPEEEIDTNTVLLTEIRDLLKTNK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 351246 351602 . + . GCA_005502385.1_00873_mRNA GCA_005502385.1_00873 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLKEFKEFAFKGNVLDLAIAVVIGAAFNKIVSSLVTYIIMPLIGKLFGSVDFAKDWQLWGIKYGLFIQSIIDFIIVAFALFIFVKIANTIMRKEEPEEEIDTNTVLLTEIRDLLKTNK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 351246 351602 . + 0 GCA_005502385.1_00873 GCA_005502385.1_00873_gene,GCA_005502385.1_00873_mRNA GCA_005502385.1_00873 Large-conductance mechanosensitive channel GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLKEFKEFAFKGNVLDLAIAVVIGAAFNKIVSSLVTYIIMPLIGKLFGSVDFAKDWQLWGIKYGLFIQSIIDFIIVAFALFIFVKIANTIMRKEEPEEEIDTNTVLLTEIRDLLKTNK persistent 118 mscL large conductance mechanosensitive channel protein MscL WP_002455375.1 UPI0001EF5524 UniRef100_A0AAE5JMV1,UniRef50_P68805,UniRef90_A0A4V2KXD9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 352093 352434 . - . GCA_005502385.1_00874_gene GCA_005502385.1_00874 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKNGQLKPGYHLQIATNSQFVLSYHVYQNLTDTRTMIPFLNSIQETYGHIPEYIVADAGYGSEPNYMAIIDDFNRTSLITYGMLKKDKTKKYKVTSLILKIGIMTKLTMNTFV . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 352093 352434 . - . GCA_005502385.1_00874_mRNA GCA_005502385.1_00874 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKNGQLKPGYHLQIATNSQFVLSYHVYQNLTDTRTMIPFLNSIQETYGHIPEYIVADAGYGSEPNYMAIIDDFNRTSLITYGMLKKDKTKKYKVTSLILKIGIMTKLTMNTFV . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 352093 352434 . - 0 GCA_005502385.1_00874 GCA_005502385.1_00874_gene,GCA_005502385.1_00874_mRNA GCA_005502385.1_00874 hypothetical protein """""" GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKNGQLKPGYHLQIATNSQFVLSYHVYQNLTDTRTMIPFLNSIQETYGHIPEYIVADAGYGSEPNYMAIIDDFNRTSLITYGMLKKDKTKKYKVTSLILKIGIMTKLTMNTFV shell 113 IS1272 transposase UniRef50_A0A0R2LAM8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 352613 355648 . - . GCA_005502385.1_00875_gene GCA_005502385.1_00875 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKPIKLTLNNFGPFLHEKIDFTQIKNDQLFLISGKTGSGKTMIFDAIVFSLFGKASTEGRSEAGLRSHFAEAKSPMWVEYEFQLNEKYFKIIRQGAFTKEGNTSQTPGKLDVYEYDSKSETYELRESKISAGNQYIKSLLGVNAEQFRQLFILPQGEFKKFLVSNSTDKQGILRTLFNSIRFEEIQNLLKNEMKEEKKQIEKRYDQIKLLWEDIDAFDDEQLIQLKQIHHIKTQELLQAIPNFKTIGHQLEEQRLHIKNEQKEQLHSIIKRIDLNKKLEQQLIELEEYHQLKHQLDEQIEDIQALKVKLNRLKDTGMLFNLYDQQRLKEEKYQIIKTKIIETENKISQINNKINILEKEHKQLNKMSDSYPLKSENLEQSKPFYHQLDKYQQAFEEQEHIIHNYNEMMKEQEQLINKGHKMSQSIDSYKVDNKAIDELTEQIYQLQKQLDEQQSLKDKYEKQVSLKQQYHQHSKKIQNLKNDIETLNQQLESIDKRNIDLNDKQTFIIEIQSALRIGDTCPICGNEVESLNQHIDFETINQNHQLLDKLSDEINEKKQHLSKSETTCELLSQNISDLGEIEYESINLDQIKEKLQCAKSEKIQLQQQLEELDKLQQQFHALQQEKHQQELKLEKLASQKRQNQTLIQDFEISTGYSSIETFKNYYLSLRKEIDEYHQHVDDTNKNMQSYQNALALEKNSVDNYLTTSKELQNELDYFTTTIRKEMKRLGLENEDEIKKLKHELQDIEHIEKRINHFDKEQYKYNVEIERLTRLTSEKELEDISNLEMQKEHIEEKYNQYVNDVVSIQYKIKKNDEKFAKIEKHIHYLDEELKEQQQIFNLSEVLSGKNHQKLSLENYVLIYYLERIIHQANIRLDIMSGRRYQLKRRESISQGYSGLEIDVFDLYSNKSRHISSLSGGETFQASLALALGLSEVVQQESGGITLESMFIDEGFGTLDQETLETSLDTLLNLKTSGRMVGIISHVSELKQRIPLILEVNTNQYQSYTKFKWK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 352613 355648 . - . GCA_005502385.1_00875_mRNA GCA_005502385.1_00875 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKPIKLTLNNFGPFLHEKIDFTQIKNDQLFLISGKTGSGKTMIFDAIVFSLFGKASTEGRSEAGLRSHFAEAKSPMWVEYEFQLNEKYFKIIRQGAFTKEGNTSQTPGKLDVYEYDSKSETYELRESKISAGNQYIKSLLGVNAEQFRQLFILPQGEFKKFLVSNSTDKQGILRTLFNSIRFEEIQNLLKNEMKEEKKQIEKRYDQIKLLWEDIDAFDDEQLIQLKQIHHIKTQELLQAIPNFKTIGHQLEEQRLHIKNEQKEQLHSIIKRIDLNKKLEQQLIELEEYHQLKHQLDEQIEDIQALKVKLNRLKDTGMLFNLYDQQRLKEEKYQIIKTKIIETENKISQINNKINILEKEHKQLNKMSDSYPLKSENLEQSKPFYHQLDKYQQAFEEQEHIIHNYNEMMKEQEQLINKGHKMSQSIDSYKVDNKAIDELTEQIYQLQKQLDEQQSLKDKYEKQVSLKQQYHQHSKKIQNLKNDIETLNQQLESIDKRNIDLNDKQTFIIEIQSALRIGDTCPICGNEVESLNQHIDFETINQNHQLLDKLSDEINEKKQHLSKSETTCELLSQNISDLGEIEYESINLDQIKEKLQCAKSEKIQLQQQLEELDKLQQQFHALQQEKHQQELKLEKLASQKRQNQTLIQDFEISTGYSSIETFKNYYLSLRKEIDEYHQHVDDTNKNMQSYQNALALEKNSVDNYLTTSKELQNELDYFTTTIRKEMKRLGLENEDEIKKLKHELQDIEHIEKRINHFDKEQYKYNVEIERLTRLTSEKELEDISNLEMQKEHIEEKYNQYVNDVVSIQYKIKKNDEKFAKIEKHIHYLDEELKEQQQIFNLSEVLSGKNHQKLSLENYVLIYYLERIIHQANIRLDIMSGRRYQLKRRESISQGYSGLEIDVFDLYSNKSRHISSLSGGETFQASLALALGLSEVVQQESGGITLESMFIDEGFGTLDQETLETSLDTLLNLKTSGRMVGIISHVSELKQRIPLILEVNTNQYQSYTKFKWK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 352613 355648 . - 0 GCA_005502385.1_00875 GCA_005502385.1_00875_gene,GCA_005502385.1_00875_mRNA GCA_005502385.1_00875 Nuclease SbcCD subunit C GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKPIKLTLNNFGPFLHEKIDFTQIKNDQLFLISGKTGSGKTMIFDAIVFSLFGKASTEGRSEAGLRSHFAEAKSPMWVEYEFQLNEKYFKIIRQGAFTKEGNTSQTPGKLDVYEYDSKSETYELRESKISAGNQYIKSLLGVNAEQFRQLFILPQGEFKKFLVSNSTDKQGILRTLFNSIRFEEIQNLLKNEMKEEKKQIEKRYDQIKLLWEDIDAFDDEQLIQLKQIHHIKTQELLQAIPNFKTIGHQLEEQRLHIKNEQKEQLHSIIKRIDLNKKLEQQLIELEEYHQLKHQLDEQIEDIQALKVKLNRLKDTGMLFNLYDQQRLKEEKYQIIKTKIIETENKISQINNKINILEKEHKQLNKMSDSYPLKSENLEQSKPFYHQLDKYQQAFEEQEHIIHNYNEMMKEQEQLINKGHKMSQSIDSYKVDNKAIDELTEQIYQLQKQLDEQQSLKDKYEKQVSLKQQYHQHSKKIQNLKNDIETLNQQLESIDKRNIDLNDKQTFIIEIQSALRIGDTCPICGNEVESLNQHIDFETINQNHQLLDKLSDEINEKKQHLSKSETTCELLSQNISDLGEIEYESINLDQIKEKLQCAKSEKIQLQQQLEELDKLQQQFHALQQEKHQQELKLEKLASQKRQNQTLIQDFEISTGYSSIETFKNYYLSLRKEIDEYHQHVDDTNKNMQSYQNALALEKNSVDNYLTTSKELQNELDYFTTTIRKEMKRLGLENEDEIKKLKHELQDIEHIEKRINHFDKEQYKYNVEIERLTRLTSEKELEDISNLEMQKEHIEEKYNQYVNDVVSIQYKIKKNDEKFAKIEKHIHYLDEELKEQQQIFNLSEVLSGKNHQKLSLENYVLIYYLERIIHQANIRLDIMSGRRYQLKRRESISQGYSGLEIDVFDLYSNKSRHISSLSGGETFQASLALALGLSEVVQQESGGITLESMFIDEGFGTLDQETLETSLDTLLNLKTSGRMVGIISHVSELKQRIPLILEVNTNQYQSYTKFKWK persistent 1011 sbcC exonuclease subunit SbcC 3.1.11.- GO:0004527,GO:0006260,GO:0006310 UniRef50_Q4L655,UniRef90_A0A3S7GSV7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 355650 356849 . - . GCA_005502385.1_00876_gene GCA_005502385.1_00876 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSSLRIQSRSFLKLKYNALKSKGNVMKIIHTGDWHLGKILNGKQFLEDQSFILEQFIQCLKDEKPDVVVIAGDIYDTTYPSKETIHLFENAIHTINIDMNIPMIISNGNHDGKERLNYGASWFEHSKLFIRTKLKHMNQPIEFNDVHFYVLPFATISEVKEFFKDASIQTYQQATEKCINYIVENLNKEKINILIGHLTINGGKTSDSERPLTIGTVESVTKSCFNVFDKVLLGHLHHPFSIKDDIIDYSGSLLQYSFSEINQPKGYKRLVVQDKNELSTSFVQLKPLRELEVVEGEYDEVIQGHIQPKNKDNYIHFKLKNMSHISDPMIHLKQLFPNTLALSNITFENEGPLHQTQIQQQDDQTIIKQFYKMITDNEMTKYQEEKINNLITLVSNKEV . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 355650 356849 . - . GCA_005502385.1_00876_mRNA GCA_005502385.1_00876 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSSLRIQSRSFLKLKYNALKSKGNVMKIIHTGDWHLGKILNGKQFLEDQSFILEQFIQCLKDEKPDVVVIAGDIYDTTYPSKETIHLFENAIHTINIDMNIPMIISNGNHDGKERLNYGASWFEHSKLFIRTKLKHMNQPIEFNDVHFYVLPFATISEVKEFFKDASIQTYQQATEKCINYIVENLNKEKINILIGHLTINGGKTSDSERPLTIGTVESVTKSCFNVFDKVLLGHLHHPFSIKDDIIDYSGSLLQYSFSEINQPKGYKRLVVQDKNELSTSFVQLKPLRELEVVEGEYDEVIQGHIQPKNKDNYIHFKLKNMSHISDPMIHLKQLFPNTLALSNITFENEGPLHQTQIQQQDDQTIIKQFYKMITDNEMTKYQEEKINNLITLVSNKEV . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 355650 356849 . - 0 GCA_005502385.1_00876 GCA_005502385.1_00876_gene,GCA_005502385.1_00876_mRNA GCA_005502385.1_00876 Nuclease SbcCD subunit D GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSSLRIQSRSFLKLKYNALKSKGNVMKIIHTGDWHLGKILNGKQFLEDQSFILEQFIQCLKDEKPDVVVIAGDIYDTTYPSKETIHLFENAIHTINIDMNIPMIISNGNHDGKERLNYGASWFEHSKLFIRTKLKHMNQPIEFNDVHFYVLPFATISEVKEFFKDASIQTYQQATEKCINYIVENLNKEKINILIGHLTINGGKTSDSERPLTIGTVESVTKSCFNVFDKVLLGHLHHPFSIKDDIIDYSGSLLQYSFSEINQPKGYKRLVVQDKNELSTSFVQLKPLRELEVVEGEYDEVIQGHIQPKNKDNYIHFKLKNMSHISDPMIHLKQLFPNTLALSNITFENEGPLHQTQIQQQDDQTIIKQFYKMITDNEMTKYQEEKINNLITLVSNKEV persistent 399 sbcD exonuclease subunit SbcD 3.1.11.- GO:0004527,GO:0006260,GO:0006310 UniRef50_Q2FYT4,UniRef90_A0A3S7GSV8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 356935 357402 . - . GCA_005502385.1_00877_gene GCA_005502385.1_00877 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAYLVFSIVFALFMGIVVIVIRMKAQKFPVNEKKIILPPIFMSTGALMYVIPYFRLTGAEILESIILGVIFSSVLIWTSHFEVQGAEVYMKRSKAFPIILISLLIIRTIIKIFISSSIDPGEIGGMFFLLAFSMIVPWRLAMLYKYKNVKKSLVS . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 356935 357402 . - . GCA_005502385.1_00877_mRNA GCA_005502385.1_00877 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAYLVFSIVFALFMGIVVIVIRMKAQKFPVNEKKIILPPIFMSTGALMYVIPYFRLTGAEILESIILGVIFSSVLIWTSHFEVQGAEVYMKRSKAFPIILISLLIIRTIIKIFISSSIDPGEIGGMFFLLAFSMIVPWRLAMLYKYKNVKKSLVS . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 356935 357402 . - 0 GCA_005502385.1_00877 GCA_005502385.1_00877_gene,GCA_005502385.1_00877_mRNA GCA_005502385.1_00877 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAYLVFSIVFALFMGIVVIVIRMKAQKFPVNEKKIILPPIFMSTGALMYVIPYFRLTGAEILESIILGVIFSSVLIWTSHFEVQGAEVYMKRSKAFPIILISLLIIRTIIKIFISSSIDPGEIGGMFFLLAFSMIVPWRLAMLYKYKNVKKSLVS persistent 155 DUF1453 domain-containing protein WP_002449105.1 UPI00019FC1B3 UniRef100_A0A2A1MFZ7,UniRef50_Q2FYT5,UniRef90_A0A2A1MFZ7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 357535 357789 . - . GCA_005502385.1_00878_gene GCA_005502385.1_00878 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGETMATWLAILLIIVALIIGLVGGFFLARKYMMDYLKKNPPINEEMLRMMMMQMGQKPSQKKINQMMTMMNKNMDQNMKSSKK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 357535 357789 . - . GCA_005502385.1_00878_mRNA GCA_005502385.1_00878 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGETMATWLAILLIIVALIIGLVGGFFLARKYMMDYLKKNPPINEEMLRMMMMQMGQKPSQKKINQMMTMMNKNMDQNMKSSKK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 357535 357789 . - 0 GCA_005502385.1_00878 GCA_005502385.1_00878_gene,GCA_005502385.1_00878_mRNA GCA_005502385.1_00878 hypothetical protein UPF0154 protein SA1178 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MGETMATWLAILLIIVALIIGLVGGFFLARKYMMDYLKKNPPINEEMLRMMMMQMGQKPSQKKINQMMTMMNKNMDQNMKSSKK persistent 84 yneF UPF0154 protein SH1564 GO:0005886 COG3763,S UniRef50_P67288,UniRef90_Q4L652 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 358009 359997 . - . GCA_005502385.1_00879_gene GCA_005502385.1_00879 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFNEKDQLAIDTIRALSIDAIEEANSGHPGLPMGAAPMAYTLWTRHLNFNPQSKDYFNRDRFILSAGHGSALLYSLLHVSGSLELEELKQFRQWGSKTPGHPEFRHTDGVEVTTGPLGQGFAMSVGMALAEAHLGGKFNKDDINVVDHYTYVLASDGDLMEGISHEAASFAGHNQLDKLIVLYDSNDISLDGELNKSFSEDVKQRFESYGWNHILVKDGNNLEEIDNAITKAKQQNGPTLIEVKTIIGYGAPNVSGTNGVHGAPLGTDERKLTFEAYGLDPEKRFNVPEEVYEIFQTTMLKRANEHEDEWKEKLETYTEKYPELAEEFKLAISGKLPENYKDELPKFSSDHNAATRADSGEIIQAISKSVPSFFGGSADLAGSNKSNVKEATDYNPNTPEGKNVWFGVREFAMGAAVNGMAAHGGLHPYGATFFVFSDYLKPALRLSAIMGLNATFIFTHDSIAVGEDGPTHEPIEQLAGLRAIPNMNVIRPADGNETRVAWEVALESKQTPTSLVLTRQNLPYLDVDEETVEEGVRKGAYVVFETETKPEYLLLATGSEVSLAIEVAKDLDKQGKGVRVVSMPNWFAFEQQTDEYKESVIPKELTKRVAIEMASPLGWHKYVGTEGKVIGIDGFGASAPGDLVVEKYGFTKENILNQIRTF . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 358009 359997 . - . GCA_005502385.1_00879_mRNA GCA_005502385.1_00879 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFNEKDQLAIDTIRALSIDAIEEANSGHPGLPMGAAPMAYTLWTRHLNFNPQSKDYFNRDRFILSAGHGSALLYSLLHVSGSLELEELKQFRQWGSKTPGHPEFRHTDGVEVTTGPLGQGFAMSVGMALAEAHLGGKFNKDDINVVDHYTYVLASDGDLMEGISHEAASFAGHNQLDKLIVLYDSNDISLDGELNKSFSEDVKQRFESYGWNHILVKDGNNLEEIDNAITKAKQQNGPTLIEVKTIIGYGAPNVSGTNGVHGAPLGTDERKLTFEAYGLDPEKRFNVPEEVYEIFQTTMLKRANEHEDEWKEKLETYTEKYPELAEEFKLAISGKLPENYKDELPKFSSDHNAATRADSGEIIQAISKSVPSFFGGSADLAGSNKSNVKEATDYNPNTPEGKNVWFGVREFAMGAAVNGMAAHGGLHPYGATFFVFSDYLKPALRLSAIMGLNATFIFTHDSIAVGEDGPTHEPIEQLAGLRAIPNMNVIRPADGNETRVAWEVALESKQTPTSLVLTRQNLPYLDVDEETVEEGVRKGAYVVFETETKPEYLLLATGSEVSLAIEVAKDLDKQGKGVRVVSMPNWFAFEQQTDEYKESVIPKELTKRVAIEMASPLGWHKYVGTEGKVIGIDGFGASAPGDLVVEKYGFTKENILNQIRTF . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 358009 359997 . - 0 GCA_005502385.1_00879 GCA_005502385.1_00879_gene,GCA_005502385.1_00879_mRNA GCA_005502385.1_00879 Transketolase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MFNEKDQLAIDTIRALSIDAIEEANSGHPGLPMGAAPMAYTLWTRHLNFNPQSKDYFNRDRFILSAGHGSALLYSLLHVSGSLELEELKQFRQWGSKTPGHPEFRHTDGVEVTTGPLGQGFAMSVGMALAEAHLGGKFNKDDINVVDHYTYVLASDGDLMEGISHEAASFAGHNQLDKLIVLYDSNDISLDGELNKSFSEDVKQRFESYGWNHILVKDGNNLEEIDNAITKAKQQNGPTLIEVKTIIGYGAPNVSGTNGVHGAPLGTDERKLTFEAYGLDPEKRFNVPEEVYEIFQTTMLKRANEHEDEWKEKLETYTEKYPELAEEFKLAISGKLPENYKDELPKFSSDHNAATRADSGEIIQAISKSVPSFFGGSADLAGSNKSNVKEATDYNPNTPEGKNVWFGVREFAMGAAVNGMAAHGGLHPYGATFFVFSDYLKPALRLSAIMGLNATFIFTHDSIAVGEDGPTHEPIEQLAGLRAIPNMNVIRPADGNETRVAWEVALESKQTPTSLVLTRQNLPYLDVDEETVEEGVRKGAYVVFETETKPEYLLLATGSEVSLAIEVAKDLDKQGKGVRVVSMPNWFAFEQQTDEYKESVIPKELTKRVAIEMASPLGWHKYVGTEGKVIGIDGFGASAPGDLVVEKYGFTKENILNQIRTF persistent 662 tkt transketolase 2.2.1.1 GO:0004802 COG0021,G WP_017174666.1 UPI00031D4B4A UniRef100_A0A3S7GSU7,UniRef50_A0A0I9QGZ2,UniRef90_A0A3S7GSU7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 360099 360338 . - . GCA_005502385.1_00880_gene GCA_005502385.1_00880 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSNNNLNIDRINELAKKKKEQGLTEAEAKEQSKLRKQYLDSFREGFKQQIESTKVIDPEGNDVTPEKLKKIQESKKNDQ . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 360099 360338 . - . GCA_005502385.1_00880_mRNA GCA_005502385.1_00880 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSNNNLNIDRINELAKKKKEQGLTEAEAKEQSKLRKQYLDSFREGFKQQIESTKVIDPEGNDVTPEKLKKIQESKKNDQ . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 360099 360338 . - 0 GCA_005502385.1_00880 GCA_005502385.1_00880_gene,GCA_005502385.1_00880_mRNA GCA_005502385.1_00880 hypothetical protein UPF0291 protein SA1176 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSNNNLNIDRINELAKKKKEQGLTEAEAKEQSKLRKQYLDSFREGFKQQIESTKVIDPEGNDVTPEKLKKIQESKKNDQ persistent 79 UPF0291 protein J7T32_009420 WP_017174665.1 UPI0002F1A550 UniRef100_A0A4Q9WQZ8,UniRef50_P60076,UniRef90_A0A4Q9WQZ8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 360524 360757 . - . GCA_005502385.1_00881_gene GCA_005502385.1_00881 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLSNYTSNIIKNIIVLVVSCIVFLVFFTNLYQNAHTEHMYEITDHTIPKKAILNDDYKNDIPDNTEQTDYKVFALVK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 360524 360757 . - . GCA_005502385.1_00881_mRNA GCA_005502385.1_00881 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLSNYTSNIIKNIIVLVVSCIVFLVFFTNLYQNAHTEHMYEITDHTIPKKAILNDDYKNDIPDNTEQTDYKVFALVK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 360524 360757 . - 0 GCA_005502385.1_00881 GCA_005502385.1_00881_gene,GCA_005502385.1_00881_mRNA GCA_005502385.1_00881 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MLSNYTSNIIKNIIVLVVSCIVFLVFFTNLYQNAHTEHMYEITDHTIPKKAILNDDYKNDIPDNTEQTDYKVFALVK persistent 77 sosA DNA damage-induced cell division inhibitor SosA WP_017174664.1 UPI00035E85DC UniRef100_A0A4Q9WNB3,UniRef50_A0A974KXL9,UniRef90_A0A974KXL9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 360901 361521 . + . GCA_005502385.1_00882_gene GCA_005502385.1_00882 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRELTKRQSEIYDYIKHVVQIKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQNNDMTREETIYVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDVFILNVIGESMIEAGILDGDKVIVRSQTIAENGDIIVAMTEDDEATVKRFFKEKNRYRLQPENSAMSPIYLDNVTVIGKVIGLYREL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 360901 361521 . + . GCA_005502385.1_00882_mRNA GCA_005502385.1_00882 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRELTKRQSEIYDYIKHVVQIKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQNNDMTREETIYVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDVFILNVIGESMIEAGILDGDKVIVRSQTIAENGDIIVAMTEDDEATVKRFFKEKNRYRLQPENSAMSPIYLDNVTVIGKVIGLYREL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 360901 361521 . + 0 GCA_005502385.1_00882 GCA_005502385.1_00882_gene,GCA_005502385.1_00882_mRNA GCA_005502385.1_00882 LexA repressor GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRELTKRQSEIYDYIKHVVQIKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQNNDMTREETIYVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDVFILNVIGESMIEAGILDGDKVIVRSQTIAENGDIIVAMTEDDEATVKRFFKEKNRYRLQPENSAMSPIYLDNVTVIGKVIGLYREL persistent 206 lexA transcriptional repressor LexA 3.4.21.88 GO:0004252,GO:0009432,GO:0045892 WP_002449099.1 UPI00019FC1B8 UniRef100_A0A4V2KWW8,UniRef50_Q8EQM5,UniRef90_A0A4V2KWW8 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 361727 362752 . - . GCA_005502385.1_00883_gene GCA_005502385.1_00883 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNVIKKFLLFTAIFLLFIIIKPIEENQFFIHLQNNVRDKVEVLLNEDTSYKNNVLKVPKKQEFAVNNIQLNMSQKEVENKIGRPKRVTSNEYGTKWYTYYNDDYQNFLMVSYINNKVNALFSNQNIITSKSKIKYNTPKKVVEQRLGKPVDKIAKGRNRFVVKNDEYDVFYKDHIYTTAFYDKHNKNNLTGLLQVSESMENRLQKQYGAPSTTLEKSFEYQNFDLVNAERKQHGLNTLDYSKKISNTARKHSEDMVKNNYFEHTDLNGHSPFDRMKRDGIQFNAAAENLAYGQQSSIYAHEGLMNSLGHRENILNTHVNTLGVGVDFNNKRQPFWTENYAG . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 361727 362752 . - . GCA_005502385.1_00883_mRNA GCA_005502385.1_00883 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNVIKKFLLFTAIFLLFIIIKPIEENQFFIHLQNNVRDKVEVLLNEDTSYKNNVLKVPKKQEFAVNNIQLNMSQKEVENKIGRPKRVTSNEYGTKWYTYYNDDYQNFLMVSYINNKVNALFSNQNIITSKSKIKYNTPKKVVEQRLGKPVDKIAKGRNRFVVKNDEYDVFYKDHIYTTAFYDKHNKNNLTGLLQVSESMENRLQKQYGAPSTTLEKSFEYQNFDLVNAERKQHGLNTLDYSKKISNTARKHSEDMVKNNYFEHTDLNGHSPFDRMKRDGIQFNAAAENLAYGQQSSIYAHEGLMNSLGHRENILNTHVNTLGVGVDFNNKRQPFWTENYAG . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 361727 362752 . - 0 GCA_005502385.1_00883 GCA_005502385.1_00883_gene,GCA_005502385.1_00883_mRNA GCA_005502385.1_00883 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNVIKKFLLFTAIFLLFIIIKPIEENQFFIHLQNNVRDKVEVLLNEDTSYKNNVLKVPKKQEFAVNNIQLNMSQKEVENKIGRPKRVTSNEYGTKWYTYYNDDYQNFLMVSYINNKVNALFSNQNIITSKSKIKYNTPKKVVEQRLGKPVDKIAKGRNRFVVKNDEYDVFYKDHIYTTAFYDKHNKNNLTGLLQVSESMENRLQKQYGAPSTTLEKSFEYQNFDLVNAERKQHGLNTLDYSKKISNTARKHSEDMVKNNYFEHTDLNGHSPFDRMKRDGIQFNAAAENLAYGQQSSIYAHEGLMNSLGHRENILNTHVNTLGVGVDFNNKRQPFWTENYAG persistent 341 CAP domain-containing protein WP_019835491.1 UPI000371ED87 UniRef100_UPI000371ED87,UniRef50_Q49XD3,UniRef90_A0A3S7GSH4 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 362767 363744 . - . GCA_005502385.1_00884_gene GCA_005502385.1_00884 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIFDYEDIQLIPNKCIVNSRSECDTTVQFGPKTFKLPVVPANMQTVMNESLAEWFAENDYFYIMHRFDEAGRIPFIKKMQNKGLFASISVGVKETEFEFIEKLKTEHLIPEYITIDIAHGHANSVINMIKHIKKHIPQSFVIAGNVGTPEGVRELENAGADATKVGIGPGRVCITKIKTGFGTGGWQLAALNICSKAARKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAAHEESPGKTVELDGKRYKEYFGSASEFQKGEHKNVEGKKMFVEHKGSLKDTLVEMQQDLQSSISYAGGKDLKSLTTVDYVIVRNSIFNGDRD . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 362767 363744 . - . GCA_005502385.1_00884_mRNA GCA_005502385.1_00884 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIFDYEDIQLIPNKCIVNSRSECDTTVQFGPKTFKLPVVPANMQTVMNESLAEWFAENDYFYIMHRFDEAGRIPFIKKMQNKGLFASISVGVKETEFEFIEKLKTEHLIPEYITIDIAHGHANSVINMIKHIKKHIPQSFVIAGNVGTPEGVRELENAGADATKVGIGPGRVCITKIKTGFGTGGWQLAALNICSKAARKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAAHEESPGKTVELDGKRYKEYFGSASEFQKGEHKNVEGKKMFVEHKGSLKDTLVEMQQDLQSSISYAGGKDLKSLTTVDYVIVRNSIFNGDRD . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 362767 363744 . - 0 GCA_005502385.1_00884 GCA_005502385.1_00884_gene,GCA_005502385.1_00884_mRNA GCA_005502385.1_00884 GMP reductase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKIFDYEDIQLIPNKCIVNSRSECDTTVQFGPKTFKLPVVPANMQTVMNESLAEWFAENDYFYIMHRFDEAGRIPFIKKMQNKGLFASISVGVKETEFEFIEKLKTEHLIPEYITIDIAHGHANSVINMIKHIKKHIPQSFVIAGNVGTPEGVRELENAGADATKVGIGPGRVCITKIKTGFGTGGWQLAALNICSKAARKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAAHEESPGKTVELDGKRYKEYFGSASEFQKGEHKNVEGKKMFVEHKGSLKDTLVEMQQDLQSSISYAGGKDLKSLTTVDYVIVRNSIFNGDRD persistent 325 GMP reductase WP_017174662.1 UPI0002DBB06E UniRef100_A0A4Q9WMI9,UniRef90_Q4L646 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 363939 364208 . - . GCA_005502385.1_00885_gene GCA_005502385.1_00885 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKKSKIAKELKREKLVNQYYELRKELKEKGDYKALKKLPRDSSPTRLTRRCKVTGRPRGVMRKFEMSRIAFREHAHKGQIPGVKKSSW . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 363939 364208 . - . GCA_005502385.1_00885_mRNA GCA_005502385.1_00885 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKKSKIAKELKREKLVNQYYELRKELKEKGDYKALKKLPRDSSPTRLTRRCKVTGRPRGVMRKFEMSRIAFREHAHKGQIPGVKKSSW . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 363939 364208 . - 0 GCA_005502385.1_00885 GCA_005502385.1_00885_gene,GCA_005502385.1_00885_mRNA GCA_005502385.1_00885 Alternate 30S ribosomal protein S14 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MAKKSKIAKELKREKLVNQYYELRKELKEKGDYKALKKLPRDSSPTRLTRRCKVTGRPRGVMRKFEMSRIAFREHAHKGQIPGVKKSSW persistent 89 rpsN 30S ribosomal protein S14 GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0015935,GO:0019843 COG0199,J WP_002449108.1 UPI00019FC1BB UniRef100_A0A8X8GPN1,UniRef50_Q5HPK6,UniRef90_Q5HPK6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 364380 364529 . - . GCA_005502385.1_00886_gene GCA_005502385.1_00886 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRVNVTLACTECGDRNYITTKNKRNNPERIEMKKYCPRLNKYTLHRETK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 364380 364529 . - . GCA_005502385.1_00886_mRNA GCA_005502385.1_00886 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRVNVTLACTECGDRNYITTKNKRNNPERIEMKKYCPRLNKYTLHRETK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 364380 364529 . - 0 GCA_005502385.1_00886 GCA_005502385.1_00886_gene,GCA_005502385.1_00886_mRNA GCA_005502385.1_00886 50S ribosomal protein L33 2 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MRVNVTLACTECGDRNYITTKNKRNNPERIEMKKYCPRLNKYTLHRETK persistent 49 rpmG 50S ribosomal protein L33 GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:1990904 COG0267,J WP_001265708.1 UPI0000132FC6 UniRef100_Q2FYU6,UniRef50_Q2FYU6,UniRef90_Q2FYU6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 364779 366227 . + . GCA_005502385.1_00887_gene GCA_005502385.1_00887 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEDNNMKRGLKSRHISMIAIGGAIGTGLFVATGSVVSQAGPGGAILAYLLIGIMLYFLMSSIGELATFYPVSGSFSSYATRFIDPSIGFTMGWLYYILWSLVSSVDVMVASNVLFYWDVFKIFSPLVWSLIFITIIFLLNIFTVKAFGETEFWLSLIKVITIIVFIVVGILMIFGILGGHTYGFENYTKGEAPFVGGLSGFLAVLLVAGFSVGGTEVVAVTAGESDNPEKTMPRAVKQVFWRILLFYVLSIVVIAAIIPYTDPLLLNKNQSVSQSPFTIVFDRIGIAFAASIINAVILTSLLSAANSGMYTTSRMLFSLSDEKQAPKFLSKLNNKTKLPMRSIVTTYILVVAIIILANFYANAVFSLLNIIGSLVIIVWAISAWAQIRLRRGIKRQGKDINTLLPYKSPLFPLGPIIVFATLIFLYLGNSIGDLFNGNIGDFFVNIMPLIVLAIIFIVHKLIRKTKFVKLDHMDLTTHHYHD . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 364779 366227 . + . GCA_005502385.1_00887_mRNA GCA_005502385.1_00887 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEDNNMKRGLKSRHISMIAIGGAIGTGLFVATGSVVSQAGPGGAILAYLLIGIMLYFLMSSIGELATFYPVSGSFSSYATRFIDPSIGFTMGWLYYILWSLVSSVDVMVASNVLFYWDVFKIFSPLVWSLIFITIIFLLNIFTVKAFGETEFWLSLIKVITIIVFIVVGILMIFGILGGHTYGFENYTKGEAPFVGGLSGFLAVLLVAGFSVGGTEVVAVTAGESDNPEKTMPRAVKQVFWRILLFYVLSIVVIAAIIPYTDPLLLNKNQSVSQSPFTIVFDRIGIAFAASIINAVILTSLLSAANSGMYTTSRMLFSLSDEKQAPKFLSKLNNKTKLPMRSIVTTYILVVAIIILANFYANAVFSLLNIIGSLVIIVWAISAWAQIRLRRGIKRQGKDINTLLPYKSPLFPLGPIIVFATLIFLYLGNSIGDLFNGNIGDFFVNIMPLIVLAIIFIVHKLIRKTKFVKLDHMDLTTHHYHD . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 364779 366227 . + 0 GCA_005502385.1_00887 GCA_005502385.1_00887_gene,GCA_005502385.1_00887_mRNA GCA_005502385.1_00887 Lysine-specific permease GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MEDNNMKRGLKSRHISMIAIGGAIGTGLFVATGSVVSQAGPGGAILAYLLIGIMLYFLMSSIGELATFYPVSGSFSSYATRFIDPSIGFTMGWLYYILWSLVSSVDVMVASNVLFYWDVFKIFSPLVWSLIFITIIFLLNIFTVKAFGETEFWLSLIKVITIIVFIVVGILMIFGILGGHTYGFENYTKGEAPFVGGLSGFLAVLLVAGFSVGGTEVVAVTAGESDNPEKTMPRAVKQVFWRILLFYVLSIVVIAAIIPYTDPLLLNKNQSVSQSPFTIVFDRIGIAFAASIINAVILTSLLSAANSGMYTTSRMLFSLSDEKQAPKFLSKLNNKTKLPMRSIVTTYILVVAIIILANFYANAVFSLLNIIGSLVIIVWAISAWAQIRLRRGIKRQGKDINTLLPYKSPLFPLGPIIVFATLIFLYLGNSIGDLFNGNIGDFFVNIMPLIVLAIIFIVHKLIRKTKFVKLDHMDLTTHHYHD persistent 482 Amino acid permease WP_019835492.1 UPI000375E06A UniRef100_UPI000375E06A,UniRef50_Q2FYU8,UniRef90_A0A3S7GSW7 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 366364 366678 . + . GCA_005502385.1_00888_gene GCA_005502385.1_00888 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVGQTNLFDDVIKSDERFVIVVQSLEERNGQLLKRTLREYPSLTHDQMENLFTHLKDVFRDEPFHVNQSAYTITVYTNLDYAADQVYAHVKRNKGKHDWTHTAK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 366364 366678 . + . GCA_005502385.1_00888_mRNA GCA_005502385.1_00888 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVGQTNLFDDVIKSDERFVIVVQSLEERNGQLLKRTLREYPSLTHDQMENLFTHLKDVFRDEPFHVNQSAYTITVYTNLDYAADQVYAHVKRNKGKHDWTHTAK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 366364 366678 . + 0 GCA_005502385.1_00888 GCA_005502385.1_00888_gene,GCA_005502385.1_00888_mRNA GCA_005502385.1_00888 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MVGQTNLFDDVIKSDERFVIVVQSLEERNGQLLKRTLREYPSLTHDQMENLFTHLKDVFRDEPFHVNQSAYTITVYTNLDYAADQVYAHVKRNKGKHDWTHTAK persistent 104 Phage protein WP_017174660.1 UPI0002E0B534 UniRef100_A0A4Q9WNG4,UniRef50_B9DP93,UniRef90_A0A6N0I444 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 366762 367565 . - . GCA_005502385.1_00889_gene GCA_005502385.1_00889 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSNYKMIVMDMDDTLMTSDNVVSPETKDYLIQLQEEGYKIVLASGRPTEGMIPVAKELKLDHYQSYIISYNGGKTINAKTEEIEVSKSVTKDHFDKITDYCRKKGFLTLTYQDGQIIFDTEHEYRKIESELTGLPMKQVDDIKAYIQSDVPKTMGVDYEENISKARNELNGTFNSDIDVTTSKPFFLEFMAKDVSKGNAIKALCEKLNISLSEVICFGDSLNDQSMFKVVGYAVAMGNASEELKKIADKVTLDNDSNGIPVALKELL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 366762 367565 . - . GCA_005502385.1_00889_mRNA GCA_005502385.1_00889 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSNYKMIVMDMDDTLMTSDNVVSPETKDYLIQLQEEGYKIVLASGRPTEGMIPVAKELKLDHYQSYIISYNGGKTINAKTEEIEVSKSVTKDHFDKITDYCRKKGFLTLTYQDGQIIFDTEHEYRKIESELTGLPMKQVDDIKAYIQSDVPKTMGVDYEENISKARNELNGTFNSDIDVTTSKPFFLEFMAKDVSKGNAIKALCEKLNISLSEVICFGDSLNDQSMFKVVGYAVAMGNASEELKKIADKVTLDNDSNGIPVALKELL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 366762 367565 . - 0 GCA_005502385.1_00889 GCA_005502385.1_00889_gene,GCA_005502385.1_00889_mRNA GCA_005502385.1_00889 Putative phosphatase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSNYKMIVMDMDDTLMTSDNVVSPETKDYLIQLQEEGYKIVLASGRPTEGMIPVAKELKLDHYQSYIISYNGGKTINAKTEEIEVSKSVTKDHFDKITDYCRKKGFLTLTYQDGQIIFDTEHEYRKIESELTGLPMKQVDDIKAYIQSDVPKTMGVDYEENISKARNELNGTFNSDIDVTTSKPFFLEFMAKDVSKGNAIKALCEKLNISLSEVICFGDSLNDQSMFKVVGYAVAMGNASEELKKIADKVTLDNDSNGIPVALKELL persistent 267 Cof-type HAD-IIB family hydrolase 3.1.3.104 WP_017174659.1 UPI0002F1877E UniRef100_A0A3S7GSV5,UniRef50_Q2FYV1,UniRef90_A0A657M6H9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 367616 368533 . - . GCA_005502385.1_00890_gene GCA_005502385.1_00890 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKPSLHLKIPASTANLGVGFDSIGMAINKYLYLYVEEAEGSNWEFKYLNEELDSLPKDKSNYVYKVAQQVAEKYNVTLPNLKVSMRSEIPLARGLGSSASALVGALYIANYFGNIQLSKYELLQLATEIEGHPDNVAPTIYGGLLAGYYNPETKETNVAHIDIPDVDVILTIPTYELKTEDSRRVLPDNYSHEKAVQNSAISNTMICALIQHNYDLAGKMMTQDGFHEPYRQHLIPEFEKVKVLSQKYDAYATVISGAGPTILTLSRKEKSGELVRTLKSEITTCDSEHATINNVGVIEEVVYPS . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 367616 368533 . - . GCA_005502385.1_00890_mRNA GCA_005502385.1_00890 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKPSLHLKIPASTANLGVGFDSIGMAINKYLYLYVEEAEGSNWEFKYLNEELDSLPKDKSNYVYKVAQQVAEKYNVTLPNLKVSMRSEIPLARGLGSSASALVGALYIANYFGNIQLSKYELLQLATEIEGHPDNVAPTIYGGLLAGYYNPETKETNVAHIDIPDVDVILTIPTYELKTEDSRRVLPDNYSHEKAVQNSAISNTMICALIQHNYDLAGKMMTQDGFHEPYRQHLIPEFEKVKVLSQKYDAYATVISGAGPTILTLSRKEKSGELVRTLKSEITTCDSEHATINNVGVIEEVVYPS . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 367616 368533 . - 0 GCA_005502385.1_00890 GCA_005502385.1_00890_gene,GCA_005502385.1_00890_mRNA GCA_005502385.1_00890 Homoserine kinase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKPSLHLKIPASTANLGVGFDSIGMAINKYLYLYVEEAEGSNWEFKYLNEELDSLPKDKSNYVYKVAQQVAEKYNVTLPNLKVSMRSEIPLARGLGSSASALVGALYIANYFGNIQLSKYELLQLATEIEGHPDNVAPTIYGGLLAGYYNPETKETNVAHIDIPDVDVILTIPTYELKTEDSRRVLPDNYSHEKAVQNSAISNTMICALIQHNYDLAGKMMTQDGFHEPYRQHLIPEFEKVKVLSQKYDAYATVISGAGPTILTLSRKEKSGELVRTLKSEITTCDSEHATINNVGVIEEVVYPS persistent 305 thrB homoserine kinase 2.7.1.39 GO:0004413,GO:0005524,GO:0009088 WP_017174658.1 UPI00031E905D UniRef100_A0A4Q9WMK2,UniRef50_Q2FYV2,UniRef90_A0A4Q9WMK2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 368535 369596 . - . GCA_005502385.1_00891_gene GCA_005502385.1_00891 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKRWQGLVEEFKDYLPVNEDTPKLTLNEGHTPLIHCANISEMLDIDLYVKYEGANPTGSFKDRGMVMAVTKAKEQGKKVVICASTGNTSASAAAYAARAGLKAIVVIPEGKIALGKLSQAVMYGAEIVSIEGNFDEALEIVKEIAQNDDDIELVNSVNPFRIEGQKTGAFEIVEQLEEAPDVLAIPVGNAGNITAYWKGFKEYHEKKGSQLPQLFGFQAEGASPIVQNKVIKNPETIATAIRIGNPASWKKATVALEESNGLIDSVTDDEILEAYQLMTSKEGVFSEPASNASIAGLIKLQRAGKLPKGKKVVAILTGNGLKDPDTAISILDNPIQPLPNNKESIINYIKGTL . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 368535 369596 . - . GCA_005502385.1_00891_mRNA GCA_005502385.1_00891 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKRWQGLVEEFKDYLPVNEDTPKLTLNEGHTPLIHCANISEMLDIDLYVKYEGANPTGSFKDRGMVMAVTKAKEQGKKVVICASTGNTSASAAAYAARAGLKAIVVIPEGKIALGKLSQAVMYGAEIVSIEGNFDEALEIVKEIAQNDDDIELVNSVNPFRIEGQKTGAFEIVEQLEEAPDVLAIPVGNAGNITAYWKGFKEYHEKKGSQLPQLFGFQAEGASPIVQNKVIKNPETIATAIRIGNPASWKKATVALEESNGLIDSVTDDEILEAYQLMTSKEGVFSEPASNASIAGLIKLQRAGKLPKGKKVVAILTGNGLKDPDTAISILDNPIQPLPNNKESIINYIKGTL . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 368535 369596 . - 0 GCA_005502385.1_00891 GCA_005502385.1_00891_gene,GCA_005502385.1_00891_mRNA GCA_005502385.1_00891 Threonine synthase GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKRWQGLVEEFKDYLPVNEDTPKLTLNEGHTPLIHCANISEMLDIDLYVKYEGANPTGSFKDRGMVMAVTKAKEQGKKVVICASTGNTSASAAAYAARAGLKAIVVIPEGKIALGKLSQAVMYGAEIVSIEGNFDEALEIVKEIAQNDDDIELVNSVNPFRIEGQKTGAFEIVEQLEEAPDVLAIPVGNAGNITAYWKGFKEYHEKKGSQLPQLFGFQAEGASPIVQNKVIKNPETIATAIRIGNPASWKKATVALEESNGLIDSVTDDEILEAYQLMTSKEGVFSEPASNASIAGLIKLQRAGKLPKGKKVVAILTGNGLKDPDTAISILDNPIQPLPNNKESIINYIKGTL persistent 353 thrC threonine synthase 4.2.3.1 GO:0004795,GO:0009088 COG0498,E WP_017174657.1 UPI0002DA7B68 UniRef100_A0A8X8KL78,UniRef50_Q9K7E3,UniRef90_A0A380G0K3 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 369602 370879 . - . GCA_005502385.1_00892_gene GCA_005502385.1_00892 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKELNVALLGLGTVGSGVVKIIEENRQQIKDTLNKDIVIKHILVRDTTKKRPINISQYHLTEDINEILNDDDIDIVIEVMGGIEPTVDWLRESLKRKKHVITANKDLLAVHLELLENLAEQQGVALKFEASVAGGIPIVNAINNGLNANNISKFMGILNGTSNFILSKMTREQTSFEDALAEAQRLGFAEADPTDDVEGIDAARKVVITSYLSFNQVIKLNDVKVKGISKTTLSDINVADKLGYKIKLIGKSTYHHREVNASVEPTLIHKSHQLAAVENEYNAIYVIGDAVGDTMFYGKGAGSLATGSAVVSDLLNVALFFESNLHTLPPHFELKTNKTRELMDNGDAIAIGEKLNYYVVIHSDESIDKLKDQLKSDLPFHKSLQIEQRDSSSYGVVVIGLDQSPESLLSKANYNIEKIYPVEGV . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 369602 370879 . - . GCA_005502385.1_00892_mRNA GCA_005502385.1_00892 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKELNVALLGLGTVGSGVVKIIEENRQQIKDTLNKDIVIKHILVRDTTKKRPINISQYHLTEDINEILNDDDIDIVIEVMGGIEPTVDWLRESLKRKKHVITANKDLLAVHLELLENLAEQQGVALKFEASVAGGIPIVNAINNGLNANNISKFMGILNGTSNFILSKMTREQTSFEDALAEAQRLGFAEADPTDDVEGIDAARKVVITSYLSFNQVIKLNDVKVKGISKTTLSDINVADKLGYKIKLIGKSTYHHREVNASVEPTLIHKSHQLAAVENEYNAIYVIGDAVGDTMFYGKGAGSLATGSAVVSDLLNVALFFESNLHTLPPHFELKTNKTRELMDNGDAIAIGEKLNYYVVIHSDESIDKLKDQLKSDLPFHKSLQIEQRDSSSYGVVVIGLDQSPESLLSKANYNIEKIYPVEGV . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 369602 370879 . - 0 GCA_005502385.1_00892 GCA_005502385.1_00892_gene,GCA_005502385.1_00892_mRNA GCA_005502385.1_00892 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKELNVALLGLGTVGSGVVKIIEENRQQIKDTLNKDIVIKHILVRDTTKKRPINISQYHLTEDINEILNDDDIDIVIEVMGGIEPTVDWLRESLKRKKHVITANKDLLAVHLELLENLAEQQGVALKFEASVAGGIPIVNAINNGLNANNISKFMGILNGTSNFILSKMTREQTSFEDALAEAQRLGFAEADPTDDVEGIDAARKVVITSYLSFNQVIKLNDVKVKGISKTTLSDINVADKLGYKIKLIGKSTYHHREVNASVEPTLIHKSHQLAAVENEYNAIYVIGDAVGDTMFYGKGAGSLATGSAVVSDLLNVALFFESNLHTLPPHFELKTNKTRELMDNGDAIAIGEKLNYYVVIHSDESIDKLKDQLKSDLPFHKSLQIEQRDSSSYGVVVIGLDQSPESLLSKANYNIEKIYPVEGV persistent 425 Homoserine dehydrogenase WP_017174656.1 UPI0002D46643 UniRef100_A0A4Q9WNC2,UniRef50_B9DP89,UniRef90_A0A4Q9WNC2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 371079 372458 . + . GCA_005502385.1_00893_gene GCA_005502385.1_00893 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKVAKFGGSSVSNATQIKKVLNIVNDDPDRKIIIVSAPGKRHKNDVKTTDLLIRLYEKVINQLDYQDKKREIIQRYADILEELHMESTLLETIDETLETIIKQLNDKHDRLYDALLSCGENFNAQLIAKYNDSQGIKTTYLSPKDAGILVTDLPQQAQILEDAYDKIYKLREIEGKIIIPGFFGVSKHNYVVTFPRGGSDITGAIIARGIKASLYENFTDVSGIFKANPNVIKNPELIEEITYREMRELSYAGFSVFHDEALQPLYKHRIPVVIKNTNHPEDKGTFIRHDREVTDKNQIIGISCDKDFTVINIKKYLMNRQIGFTRRILEILEDYHISFDHMPSGIDNISIIMRSNQIKNKENEVLSAIRKKCDIDELSIDHDLAILMIVGEGMTQSVGTANKITHALAESNINLKMINQGASEISMMFGISRENADKAVLSTYEYCYHGVCLKNLCPK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 371079 372458 . + . GCA_005502385.1_00893_mRNA GCA_005502385.1_00893 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKVAKFGGSSVSNATQIKKVLNIVNDDPDRKIIIVSAPGKRHKNDVKTTDLLIRLYEKVINQLDYQDKKREIIQRYADILEELHMESTLLETIDETLETIIKQLNDKHDRLYDALLSCGENFNAQLIAKYNDSQGIKTTYLSPKDAGILVTDLPQQAQILEDAYDKIYKLREIEGKIIIPGFFGVSKHNYVVTFPRGGSDITGAIIARGIKASLYENFTDVSGIFKANPNVIKNPELIEEITYREMRELSYAGFSVFHDEALQPLYKHRIPVVIKNTNHPEDKGTFIRHDREVTDKNQIIGISCDKDFTVINIKKYLMNRQIGFTRRILEILEDYHISFDHMPSGIDNISIIMRSNQIKNKENEVLSAIRKKCDIDELSIDHDLAILMIVGEGMTQSVGTANKITHALAESNINLKMINQGASEISMMFGISRENADKAVLSTYEYCYHGVCLKNLCPK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 371079 372458 . + 0 GCA_005502385.1_00893 GCA_005502385.1_00893_gene,GCA_005502385.1_00893_mRNA GCA_005502385.1_00893 Aspartokinase 3 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKVAKFGGSSVSNATQIKKVLNIVNDDPDRKIIIVSAPGKRHKNDVKTTDLLIRLYEKVINQLDYQDKKREIIQRYADILEELHMESTLLETIDETLETIIKQLNDKHDRLYDALLSCGENFNAQLIAKYNDSQGIKTTYLSPKDAGILVTDLPQQAQILEDAYDKIYKLREIEGKIIIPGFFGVSKHNYVVTFPRGGSDITGAIIARGIKASLYENFTDVSGIFKANPNVIKNPELIEEITYREMRELSYAGFSVFHDEALQPLYKHRIPVVIKNTNHPEDKGTFIRHDREVTDKNQIIGISCDKDFTVINIKKYLMNRQIGFTRRILEILEDYHISFDHMPSGIDNISIIMRSNQIKNKENEVLSAIRKKCDIDELSIDHDLAILMIVGEGMTQSVGTANKITHALAESNINLKMINQGASEISMMFGISRENADKAVLSTYEYCYHGVCLKNLCPK persistent 459 aspartate kinase 2.7.2.4 GO:0004072,GO:0009089 WP_070492235.1 UPI0008A2B71C UniRef100_UPI0008A2B71C,UniRef50_A0A6V7RA03,UniRef90_A0A974KXE6 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 372509 373090 . - . GCA_005502385.1_00894_gene GCA_005502385.1_00894 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSHHQNHVEELVGILKNQCRTAFKFHGEVAIQLFLNELFELPSKVDICVERKRIVEVLKVIPSSYTFKYYDTSNHNMDKDNLDIPSISHINVVNNDKVILSIFIYDVINEEWIFRLNTNIRLPKNNIYFHSLTWDVDYIKPEIVLMYDLLDYQQNNSEANYKSVLDALSYYQFVILKMVVGEHKIKKALTQKV . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 372509 373090 . - . GCA_005502385.1_00894_mRNA GCA_005502385.1_00894 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSHHQNHVEELVGILKNQCRTAFKFHGEVAIQLFLNELFELPSKVDICVERKRIVEVLKVIPSSYTFKYYDTSNHNMDKDNLDIPSISHINVVNNDKVILSIFIYDVINEEWIFRLNTNIRLPKNNIYFHSLTWDVDYIKPEIVLMYDLLDYQQNNSEANYKSVLDALSYYQFVILKMVVGEHKIKKALTQKV . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 372509 373090 . - 0 GCA_005502385.1_00894 GCA_005502385.1_00894_gene,GCA_005502385.1_00894_mRNA GCA_005502385.1_00894 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSHHQNHVEELVGILKNQCRTAFKFHGEVAIQLFLNELFELPSKVDICVERKRIVEVLKVIPSSYTFKYYDTSNHNMDKDNLDIPSISHINVVNNDKVILSIFIYDVINEEWIFRLNTNIRLPKNNIYFHSLTWDVDYIKPEIVLMYDLLDYQQNNSEANYKSVLDALSYYQFVILKMVVGEHKIKKALTQKV persistent 193 Abortive infection protein WP_137689500.1 UPI0010F5AECA UniRef100_UPI0010F5AECA,UniRef50_A0A1S1GQT7,UniRef90_A0A4Q9WMJ9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 373409 374230 . + . GCA_005502385.1_00895_gene GCA_005502385.1_00895 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTHTIILIIIIVILILAFVLNQRYMQDRIDTEVYAKNQMVSKNKILSSNNEISPHSKRNAKRELQDILDRFKASGKLKYYNIITTSNLATKHPLFEYARTFDYIVVSDVGLINIDVKSWKQKTFYHFDLPTSDHLEGDNQSVEQIVGHYISKQYHSQFDSNRNEIYTFIEKIQNNRVIYEFYQHDPYEQAAINAKILKDGIEKYFNHKVQSIGVIYFSDGSVNIIEGAEEREKYIDTVSTKSSLESVINNAIELSKHPLSETQVNTIVENFHN . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 373409 374230 . + . GCA_005502385.1_00895_mRNA GCA_005502385.1_00895 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTHTIILIIIIVILILAFVLNQRYMQDRIDTEVYAKNQMVSKNKILSSNNEISPHSKRNAKRELQDILDRFKASGKLKYYNIITTSNLATKHPLFEYARTFDYIVVSDVGLINIDVKSWKQKTFYHFDLPTSDHLEGDNQSVEQIVGHYISKQYHSQFDSNRNEIYTFIEKIQNNRVIYEFYQHDPYEQAAINAKILKDGIEKYFNHKVQSIGVIYFSDGSVNIIEGAEEREKYIDTVSTKSSLESVINNAIELSKHPLSETQVNTIVENFHN . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 373409 374230 . + 0 GCA_005502385.1_00895 GCA_005502385.1_00895_gene,GCA_005502385.1_00895_mRNA GCA_005502385.1_00895 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MTHTIILIIIIVILILAFVLNQRYMQDRIDTEVYAKNQMVSKNKILSSNNEISPHSKRNAKRELQDILDRFKASGKLKYYNIITTSNLATKHPLFEYARTFDYIVVSDVGLINIDVKSWKQKTFYHFDLPTSDHLEGDNQSVEQIVGHYISKQYHSQFDSNRNEIYTFIEKIQNNRVIYEFYQHDPYEQAAINAKILKDGIEKYFNHKVQSIGVIYFSDGSVNIIEGAEEREKYIDTVSTKSSLESVINNAIELSKHPLSETQVNTIVENFHN persistent 273 NERD domain-containing protein UniRef50_G5JGH5,UniRef90_A0A974KYX2 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 374282 374827 . - . GCA_005502385.1_00896_gene GCA_005502385.1_00896 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNSKKNLTIIVLAIIVIGVLAFQFLNHTGPFKDDSQHSSSNSTQTELKGKEKVHVDRVVDGDTFAAKKSNGEQIKVRLIGVDTPETVKPNTPVQPYGKEASNYSKQHLNNKDVYLEYDKEKEDRYGRTLAYVWLDEKTMYNEELVKKGLAREKYFSPNGKYRSTFEKDEQQAKKDKVNLWS . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 374282 374827 . - . GCA_005502385.1_00896_mRNA GCA_005502385.1_00896 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNSKKNLTIIVLAIIVIGVLAFQFLNHTGPFKDDSQHSSSNSTQTELKGKEKVHVDRVVDGDTFAAKKSNGEQIKVRLIGVDTPETVKPNTPVQPYGKEASNYSKQHLNNKDVYLEYDKEKEDRYGRTLAYVWLDEKTMYNEELVKKGLAREKYFSPNGKYRSTFEKDEQQAKKDKVNLWS . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 374282 374827 . - 0 GCA_005502385.1_00896 GCA_005502385.1_00896_gene,GCA_005502385.1_00896_mRNA GCA_005502385.1_00896 Thermonuclease GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNSKKNLTIIVLAIIVIGVLAFQFLNHTGPFKDDSQHSSSNSTQTELKGKEKVHVDRVVDGDTFAAKKSNGEQIKVRLIGVDTPETVKPNTPVQPYGKEASNYSKQHLNNKDVYLEYDKEKEDRYGRTLAYVWLDEKTMYNEELVKKGLAREKYFSPNGKYRSTFEKDEQQAKKDKVNLWS persistent 181 nucI thermonuclease NucI 3.1.31.1 GO:0003676,GO:0016894 WP_049382339.1 UPI000209D957 UniRef100_F2Z952,UniRef50_P43270,UniRef90_F2Z951 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 374996 375187 . + . GCA_005502385.1_00897_gene GCA_005502385.1_00897 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSERNENLVTMIAVVIAIIVGVILQIVYKLPIIVSVVIAVLLGILVGFIVYIIQSIIRKRKGK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 374996 375187 . + . GCA_005502385.1_00897_mRNA GCA_005502385.1_00897 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSERNENLVTMIAVVIAIIVGVILQIVYKLPIIVSVVIAVLLGILVGFIVYIIQSIIRKRKGK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 374996 375187 . + 0 GCA_005502385.1_00897 GCA_005502385.1_00897_gene,GCA_005502385.1_00897_mRNA GCA_005502385.1_00897 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MSERNENLVTMIAVVIAIIVGVILQIVYKLPIIVSVVIAVLLGILVGFIVYIIQSIIRKRKGK persistent 63 lapA LapA family protein WP_017174651.1 UPI00031D84E7 UniRef100_A0A4Q9WMM9,UniRef50_Q2FYV9,UniRef90_A0A974QN96 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 375293 375895 . - . GCA_005502385.1_00898_gene GCA_005502385.1_00898 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MISIIIAEDQYMLRKAMVQLIEFNDQMKVVNDCDNGGDAFEFIEKYHPDIAILDIEMSGLTGLEVLSKIREFKIDTKVIIVTTFKRPGYFEKAVANEVDAYVLKERSVEDLIQTIKHVMNGEKEYSTSLMTTLFKESNPLTYKEQVVLREIGDNLSSKDIAEKLYLSDGTVRNYTSNIIDKLNAENRFNAWKKAKEKGWI . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 375293 375895 . - . GCA_005502385.1_00898_mRNA GCA_005502385.1_00898 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MISIIIAEDQYMLRKAMVQLIEFNDQMKVVNDCDNGGDAFEFIEKYHPDIAILDIEMSGLTGLEVLSKIREFKIDTKVIIVTTFKRPGYFEKAVANEVDAYVLKERSVEDLIQTIKHVMNGEKEYSTSLMTTLFKESNPLTYKEQVVLREIGDNLSSKDIAEKLYLSDGTVRNYTSNIIDKLNAENRFNAWKKAKEKGWI . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 375293 375895 . - 0 GCA_005502385.1_00898 GCA_005502385.1_00898_gene,GCA_005502385.1_00898_mRNA GCA_005502385.1_00898 Transcriptional regulatory protein DesR GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MISIIIAEDQYMLRKAMVQLIEFNDQMKVVNDCDNGGDAFEFIEKYHPDIAILDIEMSGLTGLEVLSKIREFKIDTKVIIVTTFKRPGYFEKAVANEVDAYVLKERSVEDLIQTIKHVMNGEKEYSTSLMTTLFKESNPLTYKEQVVLREIGDNLSSKDIAEKLYLSDGTVRNYTSNIIDKLNAENRFNAWKKAKEKGWI persistent 200 Response regulator transcription factor WP_048679256.1 UPI000660FB60 UniRef100_UPI000660FB60,UniRef50_Q2FYW0,UniRef90_A0A3S7GSX0 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 375892 376986 . - . GCA_005502385.1_00899_gene GCA_005502385.1_00899 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKRKWNVRLGELSTLIYLLFPIISIFNEKRGSQTVYLIVLAIFIVSYLMLVIYYYRFNNNVIYSLLVVHYVGIIYFVYAINPMNSLFFFFSAFALPFMFEVTIKSKEFITFIIAIFLCLIITSIYQIQYITVLVIFYLVILIITLGNFKTKKDEALKKEIEEKNKYINTLIAEQERQRIGQDLHDTLGHVFVSLSLKSELAYKLIDKDQEKAKNEILAINQISKDTLIKVRNIIENLKSQSFEEEVQSIKTVLKDANIQFELKNIRKVNVLTPTKQSILSMILREAINNVIKHAKASKIYCEMIQEDNNLYLIIQDNGKGCNTTENFKLKSIENRVQLLKGKLEIKSKNGMHIRIMIPREDIK . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 375892 376986 . - . GCA_005502385.1_00899_mRNA GCA_005502385.1_00899 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKRKWNVRLGELSTLIYLLFPIISIFNEKRGSQTVYLIVLAIFIVSYLMLVIYYYRFNNNVIYSLLVVHYVGIIYFVYAINPMNSLFFFFSAFALPFMFEVTIKSKEFITFIIAIFLCLIITSIYQIQYITVLVIFYLVILIITLGNFKTKKDEALKKEIEEKNKYINTLIAEQERQRIGQDLHDTLGHVFVSLSLKSELAYKLIDKDQEKAKNEILAINQISKDTLIKVRNIIENLKSQSFEEEVQSIKTVLKDANIQFELKNIRKVNVLTPTKQSILSMILREAINNVIKHAKASKIYCEMIQEDNNLYLIIQDNGKGCNTTENFKLKSIENRVQLLKGKLEIKSKNGMHIRIMIPREDIK . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 375892 376986 . - 0 GCA_005502385.1_00899 GCA_005502385.1_00899_gene,GCA_005502385.1_00899_mRNA GCA_005502385.1_00899 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MKKRKWNVRLGELSTLIYLLFPIISIFNEKRGSQTVYLIVLAIFIVSYLMLVIYYYRFNNNVIYSLLVVHYVGIIYFVYAINPMNSLFFFFSAFALPFMFEVTIKSKEFITFIIAIFLCLIITSIYQIQYITVLVIFYLVILIITLGNFKTKKDEALKKEIEEKNKYINTLIAEQERQRIGQDLHDTLGHVFVSLSLKSELAYKLIDKDQEKAKNEILAINQISKDTLIKVRNIIENLKSQSFEEEVQSIKTVLKDANIQFELKNIRKVNVLTPTKQSILSMILREAINNVIKHAKASKIYCEMIQEDNNLYLIIQDNGKGCNTTENFKLKSIENRVQLLKGKLEIKSKNGMHIRIMIPREDIK persistent 364 histidine kinase 2.7.13.3 WP_093514698.1 UPI0008C2AF53 UniRef100_UPI0008C2AF53,UniRef50_A0A4U9TN42,UniRef90_A0A3S7GSW9 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 376987 377721 . - . GCA_005502385.1_00900_gene GCA_005502385.1_00900 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNNIALLKTEFKIIFRKKLTTFLSIILPVGFYLLFTSLLDLPEEAKQQFYKEYMYSMTVFSLMSFCLMQFPIEIIEERNTGWFKRLMVTPLSSKTYFTTKMIKTILLFLLAIILIFTVAHLYKHVNMSIQQWLLSGVSLWIGASLFLTLGLIIAQFNETQKASSIANIVNMVLAILGGLWFPMQTFPSWLQRISNITPTYHLKNFALELAKNQGLNITSLFILIVYSILFLIITVWINHRKEVS . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 376987 377721 . - . GCA_005502385.1_00900_mRNA GCA_005502385.1_00900 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNNIALLKTEFKIIFRKKLTTFLSIILPVGFYLLFTSLLDLPEEAKQQFYKEYMYSMTVFSLMSFCLMQFPIEIIEERNTGWFKRLMVTPLSSKTYFTTKMIKTILLFLLAIILIFTVAHLYKHVNMSIQQWLLSGVSLWIGASLFLTLGLIIAQFNETQKASSIANIVNMVLAILGGLWFPMQTFPSWLQRISNITPTYHLKNFALELAKNQGLNITSLFILIVYSILFLIITVWINHRKEVS . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 376987 377721 . - 0 GCA_005502385.1_00900 GCA_005502385.1_00900_gene,GCA_005502385.1_00900_mRNA GCA_005502385.1_00900 hypothetical protein GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MNNIALLKTEFKIIFRKKLTTFLSIILPVGFYLLFTSLLDLPEEAKQQFYKEYMYSMTVFSLMSFCLMQFPIEIIEERNTGWFKRLMVTPLSSKTYFTTKMIKTILLFLLAIILIFTVAHLYKHVNMSIQQWLLSGVSLWIGASLFLTLGLIIAQFNETQKASSIANIVNMVLAILGGLWFPMQTFPSWLQRISNITPTYHLKNFALELAKNQGLNITSLFILIVYSILFLIITVWINHRKEVS persistent 244 ABC transporter permease WP_049416210.1 UPI00066A6A90 UniRef100_UPI00066A6A90,UniRef50_Q49XA5,UniRef90_A0A3S7GVR5 . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka gene 377714 378592 . - . GCA_005502385.1_00901_gene GCA_005502385.1_00901 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIQIRHLSKKYNGKTVLKNISLNIEKGMSTALIGKNGAGKSTLINILINHLKAETGEIIDIDHLLNLNHIGVLFQKTSFPRLIKVKELYKLFCQLYKDAISIDEFKKITKLNDSQLNLYANHLSGGQQRILDFGLCLIGKPKLLILDEPTAAMDVEMREHFWTMIGKLKKENVSIFYTSHYIEEVERMADKVIFLDQGIIKLNDSPRNILTNQQYSIIKVPNTVDNNLQNLTNYFDVKIEDTILKIKTSDVKKVIYYLEKLNINLNDMTIEKQTLLETILFADVKEGGTKNE . . . . . . . GCA_005502385.1|SCOV01000001.1 prokka mRNA 377714 378592 . - . GCA_005502385.1_00901_mRNA GCA_005502385.1_00901 GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIQIRHLSKKYNGKTVLKNISLNIEKGMSTALIGKNGAGKSTLINILINHLKAETGEIIDIDHLLNLNHIGVLFQKTSFPRLIKVKELYKLFCQLYKDAISIDEFKKITKLNDSQLNLYANHLSGGQQRILDFGLCLIGKPKLLILDEPTAAMDVEMREHFWTMIGKLKKENVSIFYTSHYIEEVERMADKVIFLDQGIIKLNDSPRNILTNQQYSIIKVPNTVDNNLQNLTNYFDVKIEDTILKIKTSDVKKVIYYLEKLNINLNDMTIEKQTLLETILFADVKEGGTKNE . . . . . . . GCA_005502385.1|SCOV01000001.1 Prodigal:002006 CDS 377714 378592 . - 0 GCA_005502385.1_00901 GCA_005502385.1_00901_gene,GCA_005502385.1_00901_mRNA GCA_005502385.1_00901 Vitamin B12 import ATP-binding protein BtuD GCA_005502385.1 SCOV01000001.1 GCA_005502385.1|SCOV01000001.1 GCA_005502385.1_SCOV01000001.1 MIQIRHLSKKYNGKTVLKNISLNIEKGMSTALIGKNGAGKSTLINILINHLKAETGEIIDIDHLLNLNHIGVLFQKTSFPRLIKVKELYKLFCQLYKDAISIDEFKKITKLNDSQLNLYANHLSGGQQRILDFGLCLIGKPKLLILDEPTAAMDVEMREHFWTMIGKLKKENVSIFYTSHYIEEVERMADKVIFLDQGIIKLNDSPRNILTNQQYSIIKVPNTVDNNLQNLTNYFDVKIEDTILKIKTSDVKKVIYYLEKLNINLNDMTIEKQTLLETILFADVKEGGTKNE persistent 292 ABC transporter ATP-binding protein WP_017174647.1 UPI0002F8B3C3 UniRef100_A0A3S7GX60,UniRef50_A0A9X6AJG3,UniRef90_A0A3S7GX60 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 121 1602 . - . GCA_005502385.1_00960_gene GCA_005502385.1_00960 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MISLFGPKIGTILNIILVLGFLGNLVLAFILIFLERNRRSASSTWAWIFVLFVLPVLGFILYLFFGRTVSKRKMEKNNGKELDVYKDLIDEQAHKIDHYNYHTENKQLQNHQDMARMLLKKQDAFITEDNKIDLFIDGHELYDKVLEDIYNAKDYIHLEYFGFEIDGLGKRIIDALETKLKEGLEVKLLYDDVGSKNLKRHKFKHFESLGGEVEAFFASKLPIINFRMNNRNHRKIIVIDGQIGYIGGFNVGDDYLGLGKLGYWRDTHLRVQGDVVNALQIRFILDWNSQAHRPQFEYDDKYFPKKKVQDGHSAIQIGSSGPAYELHQIEFGYTKMIMSAKKSIYIQTPYFIPDRSYINALKMAANTGVDVNIMIPCKPDHPFVYWSTFSNVAELLEYGVKVYTYQNGFIHSKMLMIDDEVSSVGSSNMDYRSFVLNFEVNAFVYDEQLAKKLKEAYKEDIKKSKQLTLEKYKKRPLSIKFKEDIAKLLSPIL . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 121 1602 . - . GCA_005502385.1_00960_mRNA GCA_005502385.1_00960 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MISLFGPKIGTILNIILVLGFLGNLVLAFILIFLERNRRSASSTWAWIFVLFVLPVLGFILYLFFGRTVSKRKMEKNNGKELDVYKDLIDEQAHKIDHYNYHTENKQLQNHQDMARMLLKKQDAFITEDNKIDLFIDGHELYDKVLEDIYNAKDYIHLEYFGFEIDGLGKRIIDALETKLKEGLEVKLLYDDVGSKNLKRHKFKHFESLGGEVEAFFASKLPIINFRMNNRNHRKIIVIDGQIGYIGGFNVGDDYLGLGKLGYWRDTHLRVQGDVVNALQIRFILDWNSQAHRPQFEYDDKYFPKKKVQDGHSAIQIGSSGPAYELHQIEFGYTKMIMSAKKSIYIQTPYFIPDRSYINALKMAANTGVDVNIMIPCKPDHPFVYWSTFSNVAELLEYGVKVYTYQNGFIHSKMLMIDDEVSSVGSSNMDYRSFVLNFEVNAFVYDEQLAKKLKEAYKEDIKKSKQLTLEKYKKRPLSIKFKEDIAKLLSPIL . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 121 1602 . - 0 GCA_005502385.1_00960 GCA_005502385.1_00960_gene,GCA_005502385.1_00960_mRNA GCA_005502385.1_00960 Cardiolipin synthase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MISLFGPKIGTILNIILVLGFLGNLVLAFILIFLERNRRSASSTWAWIFVLFVLPVLGFILYLFFGRTVSKRKMEKNNGKELDVYKDLIDEQAHKIDHYNYHTENKQLQNHQDMARMLLKKQDAFITEDNKIDLFIDGHELYDKVLEDIYNAKDYIHLEYFGFEIDGLGKRIIDALETKLKEGLEVKLLYDDVGSKNLKRHKFKHFESLGGEVEAFFASKLPIINFRMNNRNHRKIIVIDGQIGYIGGFNVGDDYLGLGKLGYWRDTHLRVQGDVVNALQIRFILDWNSQAHRPQFEYDDKYFPKKKVQDGHSAIQIGSSGPAYELHQIEFGYTKMIMSAKKSIYIQTPYFIPDRSYINALKMAANTGVDVNIMIPCKPDHPFVYWSTFSNVAELLEYGVKVYTYQNGFIHSKMLMIDDEVSSVGSSNMDYRSFVLNFEVNAFVYDEQLAKKLKEAYKEDIKKSKQLTLEKYKKRPLSIKFKEDIAKLLSPIL persistent 493 cls cardiolipin synthase 2.7.8.- GO:0008808,GO:0016780,GO:0032049 WP_017174646.1 UPI0002EC36FC UniRef100_A0A3S7GSE9,UniRef50_Q8CPD8,UniRef90_A0A3S7GSE9 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 1635 1829 . - . GCA_005502385.1_00961_gene GCA_005502385.1_00961 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKVKFKRIQEQTIEELENEINQYLASEEGRRYELLNVSIDKIEERQFPNNEEILSAFLILADK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 1635 1829 . - . GCA_005502385.1_00961_mRNA GCA_005502385.1_00961 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKVKFKRIQEQTIEELENEINQYLASEEGRRYELLNVSIDKIEERQFPNNEEILSAFLILADK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 1635 1829 . - 0 GCA_005502385.1_00961 GCA_005502385.1_00961_gene,GCA_005502385.1_00961_mRNA GCA_005502385.1_00961 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKVKFKRIQEQTIEELENEINQYLASEEGRRYELLNVSIDKIEERQFPNNEEILSAFLILADK persistent 64 Phage protein WP_017174645.1 UPI0002D8DFCD UniRef100_A0A3S7GSJ1,UniRef50_A0A380FZZ9,UniRef90_A0A657M4U2 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 2054 3079 . + . GCA_005502385.1_00962_gene GCA_005502385.1_00962 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MISFENDYLEGAHPKVLQRFIDTNYIQASGYGDDQFSKQAADQIRKTIQCPEATVRFLIGGTQTNQVVINTVLEPYEGVISADTGHVAVHEGGAIEFSGHKVLAVPSHEGKISPKEVNTYLETFYNDFKREHMVFPGMVYISHPTEYGTLYSKEELKNLSEVCKEHHIPLFMDGARLGYGLMSNETDVTIEDIANYCDIFYIGGTKIGALCGEAIVFTNNNEPKHFTTRIKQHGALLAKGRLVGIQFLELFTNNLYFDISRHAINMANKMKQGFINKGYKVYFDSPTNQQFFVLNDDKIKDLQSKVKFAIWEKYDDTHRVVRFATSWATTEENVDKLLELI . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 2054 3079 . + . GCA_005502385.1_00962_mRNA GCA_005502385.1_00962 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MISFENDYLEGAHPKVLQRFIDTNYIQASGYGDDQFSKQAADQIRKTIQCPEATVRFLIGGTQTNQVVINTVLEPYEGVISADTGHVAVHEGGAIEFSGHKVLAVPSHEGKISPKEVNTYLETFYNDFKREHMVFPGMVYISHPTEYGTLYSKEELKNLSEVCKEHHIPLFMDGARLGYGLMSNETDVTIEDIANYCDIFYIGGTKIGALCGEAIVFTNNNEPKHFTTRIKQHGALLAKGRLVGIQFLELFTNNLYFDISRHAINMANKMKQGFINKGYKVYFDSPTNQQFFVLNDDKIKDLQSKVKFAIWEKYDDTHRVVRFATSWATTEENVDKLLELI . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 2054 3079 . + 0 GCA_005502385.1_00962 GCA_005502385.1_00962_gene,GCA_005502385.1_00962_mRNA GCA_005502385.1_00962 Low specificity L-threonine aldolase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MISFENDYLEGAHPKVLQRFIDTNYIQASGYGDDQFSKQAADQIRKTIQCPEATVRFLIGGTQTNQVVINTVLEPYEGVISADTGHVAVHEGGAIEFSGHKVLAVPSHEGKISPKEVNTYLETFYNDFKREHMVFPGMVYISHPTEYGTLYSKEELKNLSEVCKEHHIPLFMDGARLGYGLMSNETDVTIEDIANYCDIFYIGGTKIGALCGEAIVFTNNNEPKHFTTRIKQHGALLAKGRLVGIQFLELFTNNLYFDISRHAINMANKMKQGFINKGYKVYFDSPTNQQFFVLNDDKIKDLQSKVKFAIWEKYDDTHRVVRFATSWATTEENVDKLLELI persistent 341 Low specificity L-threonine aldolase 4.1.2.48 WP_048681125.1 UPI00066082F1 UniRef100_UPI00066082F1,UniRef50_A0AA94M436,UniRef90_A0A6N0I430 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 3207 3311 . + . GCA_005502385.1_00963_gene GCA_005502385.1_00963 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKYLVVDEHEKTKKAKQSMIKLENFEKYIKNVF . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 3207 3311 . + . GCA_005502385.1_00963_mRNA GCA_005502385.1_00963 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKYLVVDEHEKTKKAKQSMIKLENFEKYIKNVF . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 3207 3311 . + 0 GCA_005502385.1_00963 GCA_005502385.1_00963_gene,GCA_005502385.1_00963_mRNA GCA_005502385.1_00963 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKYLVVDEHEKTKKAKQSMIKLENFEKYIKNVF shell 34 hypothetical protein . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 3456 4796 . - . GCA_005502385.1_00964_gene GCA_005502385.1_00964 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPKHTFTKEDIRKFAKEENVRYLRLQFTDILGTIKNVEVPVSQLEKVLDNEMMFDGSSIEGFVRIEESDMYLYPDLDTWVIFPWTAGQGKVARLICDVYTTDGEPFAGDPRTNLKRILKEMEDLGYTDFNLGPEPEFFLFKLDEKGEPTLELNDNGGYFDLAPTDLGENCRRDIVLELEDMGFDIEASHHEVAPGQHEIDFKYADAISACDNIQTFKLVVKTIARKHNLHATFMPKPLFGVNGSGMHFNVSLFKGKENAFFDPNGKDQLTEDAYHFTAGILNNARGFTAVCNPLVNSYKRLVPGYEAPCYIAWSGKNRSPLVRVPTSRGLSTRIEVRSVDPAANPYMALAAILQAGLDGIKNKTKVPEPVNQNIYEMNREEREAVGIQDLPSTLYTALKAMRENDTVKKALGNHIYNQFINSKSIEWDYYRTQVSEWERDQYMKQY . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 3456 4796 . - . GCA_005502385.1_00964_mRNA GCA_005502385.1_00964 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPKHTFTKEDIRKFAKEENVRYLRLQFTDILGTIKNVEVPVSQLEKVLDNEMMFDGSSIEGFVRIEESDMYLYPDLDTWVIFPWTAGQGKVARLICDVYTTDGEPFAGDPRTNLKRILKEMEDLGYTDFNLGPEPEFFLFKLDEKGEPTLELNDNGGYFDLAPTDLGENCRRDIVLELEDMGFDIEASHHEVAPGQHEIDFKYADAISACDNIQTFKLVVKTIARKHNLHATFMPKPLFGVNGSGMHFNVSLFKGKENAFFDPNGKDQLTEDAYHFTAGILNNARGFTAVCNPLVNSYKRLVPGYEAPCYIAWSGKNRSPLVRVPTSRGLSTRIEVRSVDPAANPYMALAAILQAGLDGIKNKTKVPEPVNQNIYEMNREEREAVGIQDLPSTLYTALKAMRENDTVKKALGNHIYNQFINSKSIEWDYYRTQVSEWERDQYMKQY . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 3456 4796 . - 0 GCA_005502385.1_00964 GCA_005502385.1_00964_gene,GCA_005502385.1_00964_mRNA GCA_005502385.1_00964 Glutamine synthetase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPKHTFTKEDIRKFAKEENVRYLRLQFTDILGTIKNVEVPVSQLEKVLDNEMMFDGSSIEGFVRIEESDMYLYPDLDTWVIFPWTAGQGKVARLICDVYTTDGEPFAGDPRTNLKRILKEMEDLGYTDFNLGPEPEFFLFKLDEKGEPTLELNDNGGYFDLAPTDLGENCRRDIVLELEDMGFDIEASHHEVAPGQHEIDFKYADAISACDNIQTFKLVVKTIARKHNLHATFMPKPLFGVNGSGMHFNVSLFKGKENAFFDPNGKDQLTEDAYHFTAGILNNARGFTAVCNPLVNSYKRLVPGYEAPCYIAWSGKNRSPLVRVPTSRGLSTRIEVRSVDPAANPYMALAAILQAGLDGIKNKTKVPEPVNQNIYEMNREEREAVGIQDLPSTLYTALKAMRENDTVKKALGNHIYNQFINSKSIEWDYYRTQVSEWERDQYMKQY persistent 446 glnA type I glutamate--ammonia ligase 6.3.1.2 GO:0004356,GO:0005524,GO:0005737,GO:0006542,GO:0046872 COG0174,E WP_017174642.1 UPI00031E02FA UniRef100_A0A4V2KXE1,UniRef50_P12425,UniRef90_Q5HGC3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 4817 5182 . - . GCA_005502385.1_00965_gene GCA_005502385.1_00965 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSNDTIRRNMAVFSMSVVCKLTELTARQIRYYETHELIKPERTEGNKRLFSMNDLERLLEIKTLIEKGFNLKGIKQIITNNQGHLTTDEQETRKRMIVDATQKPRSEALPINRGDLSRFIN . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 4817 5182 . - . GCA_005502385.1_00965_mRNA GCA_005502385.1_00965 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSNDTIRRNMAVFSMSVVCKLTELTARQIRYYETHELIKPERTEGNKRLFSMNDLERLLEIKTLIEKGFNLKGIKQIITNNQGHLTTDEQETRKRMIVDATQKPRSEALPINRGDLSRFIN . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 4817 5182 . - 0 GCA_005502385.1_00965 GCA_005502385.1_00965_gene,GCA_005502385.1_00965_mRNA GCA_005502385.1_00965 HTH-type transcriptional regulator GlnR GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSNDTIRRNMAVFSMSVVCKLTELTARQIRYYETHELIKPERTEGNKRLFSMNDLERLLEIKTLIEKGFNLKGIKQIITNNQGHLTTDEQETRKRMIVDATQKPRSEALPINRGDLSRFIN persistent 121 soxR MerR family transcriptional regulator COG0789,K UniRef50_Q2FYY7,UniRef90_A0A657ZS39 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 5410 6384 . - . GCA_005502385.1_00966_gene GCA_005502385.1_00966 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKENFWNELPRPFFILAPMEDVTDIVFRHVVSEAARPDVFFTEFTNTESFCHPEGIHSVRGRLTFSEDEQPMVAHIWGDKPEQFKEMSFGLADMGFKGIDLNMGCPVANVAKKGKGSGLILRPERAAEIIQAAKAGGLPVSVKTRLGYYNIEEWKEWLRHVFKQDIANLSIHLRTRKEMSKVDAHWELIEAIKEMRDEVAPQTLLTINGDIPDRQKGMELATKYGIDGVMIGRGIFHNPFAFEKEPREHTSKELLDLFRLHLELFEKYSNEETQQFKSLRRFFKIYVRGIRGASELRHQLMSTETVDEARALLDDFEANMEDNH . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 5410 6384 . - . GCA_005502385.1_00966_mRNA GCA_005502385.1_00966 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKENFWNELPRPFFILAPMEDVTDIVFRHVVSEAARPDVFFTEFTNTESFCHPEGIHSVRGRLTFSEDEQPMVAHIWGDKPEQFKEMSFGLADMGFKGIDLNMGCPVANVAKKGKGSGLILRPERAAEIIQAAKAGGLPVSVKTRLGYYNIEEWKEWLRHVFKQDIANLSIHLRTRKEMSKVDAHWELIEAIKEMRDEVAPQTLLTINGDIPDRQKGMELATKYGIDGVMIGRGIFHNPFAFEKEPREHTSKELLDLFRLHLELFEKYSNEETQQFKSLRRFFKIYVRGIRGASELRHQLMSTETVDEARALLDDFEANMEDNH . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 5410 6384 . - 0 GCA_005502385.1_00966 GCA_005502385.1_00966_gene,GCA_005502385.1_00966_mRNA GCA_005502385.1_00966 putative tRNA-dihydrouridine synthase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKENFWNELPRPFFILAPMEDVTDIVFRHVVSEAARPDVFFTEFTNTESFCHPEGIHSVRGRLTFSEDEQPMVAHIWGDKPEQFKEMSFGLADMGFKGIDLNMGCPVANVAKKGKGSGLILRPERAAEIIQAAKAGGLPVSVKTRLGYYNIEEWKEWLRHVFKQDIANLSIHLRTRKEMSKVDAHWELIEAIKEMRDEVAPQTLLTINGDIPDRQKGMELATKYGIDGVMIGRGIFHNPFAFEKEPREHTSKELLDLFRLHLELFEKYSNEETQQFKSLRRFFKIYVRGIRGASELRHQLMSTETVDEARALLDDFEANMEDNH persistent 324 tRNA-dihydrouridine synthase WP_049379239.1 UPI00066ED2FF UniRef100_UPI00066ED2FF,UniRef50_O31546,UniRef90_A0A4U9T0U4 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 6525 7763 . - . GCA_005502385.1_00967_gene GCA_005502385.1_00967 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSDIQHIVSKVEETLTPLFKEIEETAYINQEKVLNAFHHVKASENDLVGSTGYGYDDFGRDHLEEIYAHTFKAEDALVRPQIISGTHAITLALQSTLKYGDELMYITGSPYDTLLEVIGVNGNGIESLKEHGVTYKEVALKDGMIDVETVLNTISKQTKVIAIQRSKGYGQRPSITVDEIETAISQIKQRYPNVIIFVDNCYGEFVERREPIEVGADLIAGSLIKNPGGGLAKIGGYIAGRKDLIERCGYRLTAPGIGKEAGASLFSLQEMYQGFFLAPHVVSQSLKGSLFTSLLLEKMNMNTVPKYDAKRTDLIQTVQFDTKEQMIAFCQSIQHASPINAHFSPEPSYMPGYEDDVIMAAGTFVQGSSIELSADGPIRPPYEAYVQGGLTYEHVKIAVTRAVMNLKEQNLI . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 6525 7763 . - . GCA_005502385.1_00967_mRNA GCA_005502385.1_00967 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSDIQHIVSKVEETLTPLFKEIEETAYINQEKVLNAFHHVKASENDLVGSTGYGYDDFGRDHLEEIYAHTFKAEDALVRPQIISGTHAITLALQSTLKYGDELMYITGSPYDTLLEVIGVNGNGIESLKEHGVTYKEVALKDGMIDVETVLNTISKQTKVIAIQRSKGYGQRPSITVDEIETAISQIKQRYPNVIIFVDNCYGEFVERREPIEVGADLIAGSLIKNPGGGLAKIGGYIAGRKDLIERCGYRLTAPGIGKEAGASLFSLQEMYQGFFLAPHVVSQSLKGSLFTSLLLEKMNMNTVPKYDAKRTDLIQTVQFDTKEQMIAFCQSIQHASPINAHFSPEPSYMPGYEDDVIMAAGTFVQGSSIELSADGPIRPPYEAYVQGGLTYEHVKIAVTRAVMNLKEQNLI . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 6525 7763 . - 0 GCA_005502385.1_00967 GCA_005502385.1_00967_gene,GCA_005502385.1_00967_mRNA GCA_005502385.1_00967 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSDIQHIVSKVEETLTPLFKEIEETAYINQEKVLNAFHHVKASENDLVGSTGYGYDDFGRDHLEEIYAHTFKAEDALVRPQIISGTHAITLALQSTLKYGDELMYITGSPYDTLLEVIGVNGNGIESLKEHGVTYKEVALKDGMIDVETVLNTISKQTKVIAIQRSKGYGQRPSITVDEIETAISQIKQRYPNVIIFVDNCYGEFVERREPIEVGADLIAGSLIKNPGGGLAKIGGYIAGRKDLIERCGYRLTAPGIGKEAGASLFSLQEMYQGFFLAPHVVSQSLKGSLFTSLLLEKMNMNTVPKYDAKRTDLIQTVQFDTKEQMIAFCQSIQHASPINAHFSPEPSYMPGYEDDVIMAAGTFVQGSSIELSADGPIRPPYEAYVQGGLTYEHVKIAVTRAVMNLKEQNLI persistent 412 methionine gamma-lyase family protein UniRef50_A0A202F6W0,UniRef90_UPI0008FFF43C . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 7789 9027 . - . GCA_005502385.1_00968_gene GCA_005502385.1_00968 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAQQHTYDTKKKLETAVLVGVHAQSDHQYNFESTMEELEALALTCQLDVKGQVTQNKDQFDYKYYVGKGKIDEIKAFIEFHDIDVVVTNDELTTAQSKTLNDNLGIKIIDRTQLILEIFALRARSREGKLQVELAQLDYLLPRLQGHGKSLSRLGGGIGTRGPGETKLEMDRRHIRTRMNEIKLQLKTVVEHRERYRNQREQNQVFQIALIGYTNAGKSSWFNVLANETTFEKDLLFATLDPKTRQIQINNGFNLIISDTVGFIQKLPTTLVAAFKSTLEEAKSADLLLHVVDASHPEYRAQYDTVNQLVKDLDMDDLPQAIIFNKKDQCSEETDVPVSGHPSVFVSSRNSEDKLKVKQLLFDQIKATLSYYVETVSSEDADRLYFLKQHTLIEEMKFDENNESYIVKGYRK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 7789 9027 . - . GCA_005502385.1_00968_mRNA GCA_005502385.1_00968 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAQQHTYDTKKKLETAVLVGVHAQSDHQYNFESTMEELEALALTCQLDVKGQVTQNKDQFDYKYYVGKGKIDEIKAFIEFHDIDVVVTNDELTTAQSKTLNDNLGIKIIDRTQLILEIFALRARSREGKLQVELAQLDYLLPRLQGHGKSLSRLGGGIGTRGPGETKLEMDRRHIRTRMNEIKLQLKTVVEHRERYRNQREQNQVFQIALIGYTNAGKSSWFNVLANETTFEKDLLFATLDPKTRQIQINNGFNLIISDTVGFIQKLPTTLVAAFKSTLEEAKSADLLLHVVDASHPEYRAQYDTVNQLVKDLDMDDLPQAIIFNKKDQCSEETDVPVSGHPSVFVSSRNSEDKLKVKQLLFDQIKATLSYYVETVSSEDADRLYFLKQHTLIEEMKFDENNESYIVKGYRK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 7789 9027 . - 0 GCA_005502385.1_00968 GCA_005502385.1_00968_gene,GCA_005502385.1_00968_mRNA GCA_005502385.1_00968 GTPase HflX GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAQQHTYDTKKKLETAVLVGVHAQSDHQYNFESTMEELEALALTCQLDVKGQVTQNKDQFDYKYYVGKGKIDEIKAFIEFHDIDVVVTNDELTTAQSKTLNDNLGIKIIDRTQLILEIFALRARSREGKLQVELAQLDYLLPRLQGHGKSLSRLGGGIGTRGPGETKLEMDRRHIRTRMNEIKLQLKTVVEHRERYRNQREQNQVFQIALIGYTNAGKSSWFNVLANETTFEKDLLFATLDPKTRQIQINNGFNLIISDTVGFIQKLPTTLVAAFKSTLEEAKSADLLLHVVDASHPEYRAQYDTVNQLVKDLDMDDLPQAIIFNKKDQCSEETDVPVSGHPSVFVSSRNSEDKLKVKQLLFDQIKATLSYYVETVSSEDADRLYFLKQHTLIEEMKFDENNESYIVKGYRK persistent 412 hflX GTPase HflX GO:0005525 WP_037541003.1 UPI000447FB81 UniRef100_A0A3S7GSX9,UniRef50_B9DPA4,UniRef90_A0A3S7GSX9 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 9137 9613 . + . GCA_005502385.1_00969_gene GCA_005502385.1_00969 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MENIYDFEVQKSNGENYKLDVYKGDVMLIVNTASECGFTPQFEGLQELYNKYKDQGFIVLGFPCNQFGGQEPGSGAEANQNCKINYGVTFPIHEKIDVKGDNQHPLFRYLTSQAKGMLSEKIKWNFTKFLVDREGNIVQRFSPQKKPAQIEKDIEKLL . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 9137 9613 . + . GCA_005502385.1_00969_mRNA GCA_005502385.1_00969 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MENIYDFEVQKSNGENYKLDVYKGDVMLIVNTASECGFTPQFEGLQELYNKYKDQGFIVLGFPCNQFGGQEPGSGAEANQNCKINYGVTFPIHEKIDVKGDNQHPLFRYLTSQAKGMLSEKIKWNFTKFLVDREGNIVQRFSPQKKPAQIEKDIEKLL . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 9137 9613 . + 0 GCA_005502385.1_00969 GCA_005502385.1_00969_gene,GCA_005502385.1_00969_mRNA GCA_005502385.1_00969 Glutathione peroxidase BsaA GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MENIYDFEVQKSNGENYKLDVYKGDVMLIVNTASECGFTPQFEGLQELYNKYKDQGFIVLGFPCNQFGGQEPGSGAEANQNCKINYGVTFPIHEKIDVKGDNQHPLFRYLTSQAKGMLSEKIKWNFTKFLVDREGNIVQRFSPQKKPAQIEKDIEKLL persistent 158 Glutathione peroxidase 1.11.1.9 WP_037541002.1 UPI00044A5E08 UniRef100_UPI00044A5E08,UniRef50_E3E934,UniRef90_A0A8X8GNB6 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 9804 10046 . - . GCA_005502385.1_00970_gene GCA_005502385.1_00970 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MIANQNIQDQALENFKAEQTEITVFFLNGFQMKGVIEDFDKYMISLVSQGKQHLIYKHAISTFTVDTESTDSEATGEGEE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 9804 10046 . - . GCA_005502385.1_00970_mRNA GCA_005502385.1_00970 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MIANQNIQDQALENFKAEQTEITVFFLNGFQMKGVIEDFDKYMISLVSQGKQHLIYKHAISTFTVDTESTDSEATGEGEE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 9804 10046 . - 0 GCA_005502385.1_00970 GCA_005502385.1_00970_gene,GCA_005502385.1_00970_mRNA GCA_005502385.1_00970 RNA-binding protein Hfq GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MIANQNIQDQALENFKAEQTEITVFFLNGFQMKGVIEDFDKYMISLVSQGKQHLIYKHAISTFTVDTESTDSEATGEGEE persistent 80 hfq RNA chaperone Hfq GO:0003723,GO:0016070 WP_002448741.1 UPI00019FC632 UniRef100_A0A1L8Y9N8,UniRef50_A0A640MVL3,UniRef90_A0A1L8Y9N8 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 10000 10998 . - . GCA_005502385.1_00971_gene GCA_005502385.1_00971 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQASKKPFLVVIVGPTASGKTELSIELAKKMNGEIISGDSMQVYRQMNIGTAKVTETEMEGIPHYLIDILNPDESFSAYEFKKRAEVLIEDITKRGKVPIIAGGTGLYIQSLIYDYPFDDENVSVEKELRVKEKLDALNQLNNDDLHRYLASFDETSAKDIHPNNRKRVLRAIEYYLKTKKLLSSRKKVQQFTENYDTLLVGIEMSRKTLYTRINKRVDIMLGHGLFNEVKALVEQGFESSQSMQAIGYKELVPVIKGEMELEPAVELLKQHSRQYAKRQLTWFKNKMNVQWFDRETMSLQMMLDEITTQINKRSSKHDCKPKHPRSSTREL . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 10000 10998 . - . GCA_005502385.1_00971_mRNA GCA_005502385.1_00971 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQASKKPFLVVIVGPTASGKTELSIELAKKMNGEIISGDSMQVYRQMNIGTAKVTETEMEGIPHYLIDILNPDESFSAYEFKKRAEVLIEDITKRGKVPIIAGGTGLYIQSLIYDYPFDDENVSVEKELRVKEKLDALNQLNNDDLHRYLASFDETSAKDIHPNNRKRVLRAIEYYLKTKKLLSSRKKVQQFTENYDTLLVGIEMSRKTLYTRINKRVDIMLGHGLFNEVKALVEQGFESSQSMQAIGYKELVPVIKGEMELEPAVELLKQHSRQYAKRQLTWFKNKMNVQWFDRETMSLQMMLDEITTQINKRSSKHDCKPKHPRSSTREL . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 10000 10998 . - 0 GCA_005502385.1_00971 GCA_005502385.1_00971_gene,GCA_005502385.1_00971_mRNA GCA_005502385.1_00971 tRNA dimethylallyltransferase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQASKKPFLVVIVGPTASGKTELSIELAKKMNGEIISGDSMQVYRQMNIGTAKVTETEMEGIPHYLIDILNPDESFSAYEFKKRAEVLIEDITKRGKVPIIAGGTGLYIQSLIYDYPFDDENVSVEKELRVKEKLDALNQLNNDDLHRYLASFDETSAKDIHPNNRKRVLRAIEYYLKTKKLLSSRKKVQQFTENYDTLLVGIEMSRKTLYTRINKRVDIMLGHGLFNEVKALVEQGFESSQSMQAIGYKELVPVIKGEMELEPAVELLKQHSRQYAKRQLTWFKNKMNVQWFDRETMSLQMMLDEITTQINKRSSKHDCKPKHPRSSTREL persistent 332 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 2.5.1.75 GO:0005737,GO:0006400,GO:0052381 WP_037541000.1 UPI00044AADC5 UniRef100_UPI00044AADC5,UniRef50_Q5HPN8,UniRef90_A0A8X8KIL5 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 11002 11937 . - . GCA_005502385.1_00972_gene GCA_005502385.1_00972 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGQSAYKITVEDGTTLEVKVDKANIATYGIVHIFHGMAEHMDRYETLVKALTHQGYDVIRHNHRGHGKEIDEKERGHYDSMNQVVQDAFEIAQTLYDSEKGLPYIVLGHSMGSIIARLFVETYPNFANGLILTGTGQYPKWKGIPAGISLKLISIFTGKRKRLKWVNQLVYKSFNKKIDQPRTESDWLSSQSTEVDKFVNDEYTGFLVSNQLIYETVKHMTRTANYTQLKKMNKQLPILMISGKNDPFGEYGRGVKSLARKFTKAGIKHITVQLYANRRHEILFEVDQQMIWNHMFDWIQKQVLKNNQSEA . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 11002 11937 . - . GCA_005502385.1_00972_mRNA GCA_005502385.1_00972 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGQSAYKITVEDGTTLEVKVDKANIATYGIVHIFHGMAEHMDRYETLVKALTHQGYDVIRHNHRGHGKEIDEKERGHYDSMNQVVQDAFEIAQTLYDSEKGLPYIVLGHSMGSIIARLFVETYPNFANGLILTGTGQYPKWKGIPAGISLKLISIFTGKRKRLKWVNQLVYKSFNKKIDQPRTESDWLSSQSTEVDKFVNDEYTGFLVSNQLIYETVKHMTRTANYTQLKKMNKQLPILMISGKNDPFGEYGRGVKSLARKFTKAGIKHITVQLYANRRHEILFEVDQQMIWNHMFDWIQKQVLKNNQSEA . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 11002 11937 . - 0 GCA_005502385.1_00972 GCA_005502385.1_00972_gene,GCA_005502385.1_00972_mRNA GCA_005502385.1_00972 Monoacylglycerol lipase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGQSAYKITVEDGTTLEVKVDKANIATYGIVHIFHGMAEHMDRYETLVKALTHQGYDVIRHNHRGHGKEIDEKERGHYDSMNQVVQDAFEIAQTLYDSEKGLPYIVLGHSMGSIIARLFVETYPNFANGLILTGTGQYPKWKGIPAGISLKLISIFTGKRKRLKWVNQLVYKSFNKKIDQPRTESDWLSSQSTEVDKFVNDEYTGFLVSNQLIYETVKHMTRTANYTQLKKMNKQLPILMISGKNDPFGEYGRGVKSLARKFTKAGIKHITVQLYANRRHEILFEVDQQMIWNHMFDWIQKQVLKNNQSEA persistent 311 Lysophospholipase UniRef50_A0A380G939,UniRef90_A0A3S7GSJ8 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 12145 13815 . - . GCA_005502385.1_00973_gene GCA_005502385.1_00973 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MALSTFNRNLIKKNLRNKEFDVVVIGGGITGAGIALDATQRGMKVALVEMQDFAQGTSSRSTKLVHGGLRYLKQAQIKVVAETGKERAIVYENGPHVTTPEWMLLPMHKGGTFGKFTTNIGLTMYDRLAGVKRYERKKMLSKQATLNKEPLVKKDGLKGGGYYVEYRTDDARLTIEVMKRAAEKGAEVINHTKSTDFVYDAKNKVSGIKVKDMLTGEEYQINAKKVINAAGPWVDEVRKKDYTRNNKQLRLTKGVHVVIDQSKFPLRQAVYFDTEKDGRMIFAIPREGKAYVGTTDTFYNNEKTKPLTNQEDRDYLIDAINYMFPDVHVTDADIESTWAGVRPLILEDGKDPSEISRKDEIWEGKSGLLTIAGGKLTGYRHMALEIVDLLAKRLKQEYGLKFADSKTKNTPISGGDVGGSKNFENYVNRKVQEGKALGLSTDVAHNLASKYGSNVDKLFAIAQLTNEKDLNMPLELYVQLVYSVQNEMVYKPTDFLIRRTGKLYFDINTVKQYKQAIIDELDKLLNYTAEQKNEFSKEVDEAIEEATHGNHQPAEK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 12145 13815 . - . GCA_005502385.1_00973_mRNA GCA_005502385.1_00973 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MALSTFNRNLIKKNLRNKEFDVVVIGGGITGAGIALDATQRGMKVALVEMQDFAQGTSSRSTKLVHGGLRYLKQAQIKVVAETGKERAIVYENGPHVTTPEWMLLPMHKGGTFGKFTTNIGLTMYDRLAGVKRYERKKMLSKQATLNKEPLVKKDGLKGGGYYVEYRTDDARLTIEVMKRAAEKGAEVINHTKSTDFVYDAKNKVSGIKVKDMLTGEEYQINAKKVINAAGPWVDEVRKKDYTRNNKQLRLTKGVHVVIDQSKFPLRQAVYFDTEKDGRMIFAIPREGKAYVGTTDTFYNNEKTKPLTNQEDRDYLIDAINYMFPDVHVTDADIESTWAGVRPLILEDGKDPSEISRKDEIWEGKSGLLTIAGGKLTGYRHMALEIVDLLAKRLKQEYGLKFADSKTKNTPISGGDVGGSKNFENYVNRKVQEGKALGLSTDVAHNLASKYGSNVDKLFAIAQLTNEKDLNMPLELYVQLVYSVQNEMVYKPTDFLIRRTGKLYFDINTVKQYKQAIIDELDKLLNYTAEQKNEFSKEVDEAIEEATHGNHQPAEK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 12145 13815 . - 0 GCA_005502385.1_00973 GCA_005502385.1_00973_gene,GCA_005502385.1_00973_mRNA GCA_005502385.1_00973 Aerobic glycerol-3-phosphate dehydrogenase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MALSTFNRNLIKKNLRNKEFDVVVIGGGITGAGIALDATQRGMKVALVEMQDFAQGTSSRSTKLVHGGLRYLKQAQIKVVAETGKERAIVYENGPHVTTPEWMLLPMHKGGTFGKFTTNIGLTMYDRLAGVKRYERKKMLSKQATLNKEPLVKKDGLKGGGYYVEYRTDDARLTIEVMKRAAEKGAEVINHTKSTDFVYDAKNKVSGIKVKDMLTGEEYQINAKKVINAAGPWVDEVRKKDYTRNNKQLRLTKGVHVVIDQSKFPLRQAVYFDTEKDGRMIFAIPREGKAYVGTTDTFYNNEKTKPLTNQEDRDYLIDAINYMFPDVHVTDADIESTWAGVRPLILEDGKDPSEISRKDEIWEGKSGLLTIAGGKLTGYRHMALEIVDLLAKRLKQEYGLKFADSKTKNTPISGGDVGGSKNFENYVNRKVQEGKALGLSTDVAHNLASKYGSNVDKLFAIAQLTNEKDLNMPLELYVQLVYSVQNEMVYKPTDFLIRRTGKLYFDINTVKQYKQAIIDELDKLLNYTAEQKNEFSKEVDEAIEEATHGNHQPAEK persistent 556 Glycerol-3-phosphate dehydrogenase 1.1.5.3 WP_002488651.1 UPI00024E1643 UniRef100_UPI002554705C,UniRef50_Q6GHD4,UniRef90_A0A974QNA5 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 13965 15464 . - . GCA_005502385.1_00974_gene GCA_005502385.1_00974 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEQYIMSIDQGTTSSRAILFDKEGQIQGVAQREFKQYFPKSGWVEHDANEIWTSVLAVMAEVINENEIDPEQIKGIGITNQRETTVIWDKKTGRPIYHAIVWQSRQTQHICNELKEQGHEKTFRNKTGLLLDPYFSGTKVRWILDNVKGAREKAENGDLLFGTIDTWLVWKLSGGEAHITDYSNASRTLMYNIHELKWDDELLELLDIPKAILPEVKESSEVYAHTKDYHFFGQEVPIAGIAGDQQAALFGQACFERGDVKNTYGTGGFMLMNTGEEPVTSESGLLTTIAYGLDGKVNYALEGSIFVSGSAIQWLRDGLRIINSAPQTENYATRVNSTDNVYFVPAFVGLGTPYWDSEARGAIFGLTRGTEKEHFIRATLESLCYQTRDVMEAMSKDSGIEVNNLRVDGGAVKNNFIMQFQADIVDTSVERPEVQETTALGAAYLAGLAVDFWEDKKDIADGWKLEKEFNPEMSEETRTKLYKGWKKAVEATQVFKLED . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 13965 15464 . - . GCA_005502385.1_00974_mRNA GCA_005502385.1_00974 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEQYIMSIDQGTTSSRAILFDKEGQIQGVAQREFKQYFPKSGWVEHDANEIWTSVLAVMAEVINENEIDPEQIKGIGITNQRETTVIWDKKTGRPIYHAIVWQSRQTQHICNELKEQGHEKTFRNKTGLLLDPYFSGTKVRWILDNVKGAREKAENGDLLFGTIDTWLVWKLSGGEAHITDYSNASRTLMYNIHELKWDDELLELLDIPKAILPEVKESSEVYAHTKDYHFFGQEVPIAGIAGDQQAALFGQACFERGDVKNTYGTGGFMLMNTGEEPVTSESGLLTTIAYGLDGKVNYALEGSIFVSGSAIQWLRDGLRIINSAPQTENYATRVNSTDNVYFVPAFVGLGTPYWDSEARGAIFGLTRGTEKEHFIRATLESLCYQTRDVMEAMSKDSGIEVNNLRVDGGAVKNNFIMQFQADIVDTSVERPEVQETTALGAAYLAGLAVDFWEDKKDIADGWKLEKEFNPEMSEETRTKLYKGWKKAVEATQVFKLED . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 13965 15464 . - 0 GCA_005502385.1_00974 GCA_005502385.1_00974_gene,GCA_005502385.1_00974_mRNA GCA_005502385.1_00974 Glycerol kinase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEQYIMSIDQGTTSSRAILFDKEGQIQGVAQREFKQYFPKSGWVEHDANEIWTSVLAVMAEVINENEIDPEQIKGIGITNQRETTVIWDKKTGRPIYHAIVWQSRQTQHICNELKEQGHEKTFRNKTGLLLDPYFSGTKVRWILDNVKGAREKAENGDLLFGTIDTWLVWKLSGGEAHITDYSNASRTLMYNIHELKWDDELLELLDIPKAILPEVKESSEVYAHTKDYHFFGQEVPIAGIAGDQQAALFGQACFERGDVKNTYGTGGFMLMNTGEEPVTSESGLLTTIAYGLDGKVNYALEGSIFVSGSAIQWLRDGLRIINSAPQTENYATRVNSTDNVYFVPAFVGLGTPYWDSEARGAIFGLTRGTEKEHFIRATLESLCYQTRDVMEAMSKDSGIEVNNLRVDGGAVKNNFIMQFQADIVDTSVERPEVQETTALGAAYLAGLAVDFWEDKKDIADGWKLEKEFNPEMSEETRTKLYKGWKKAVEATQVFKLED persistent 499 glpK glycerol kinase GlpK 2.7.1.30 GO:0004370,GO:0005524,GO:0005829,GO:0006071,GO:0006072,GO:0019563 C,COG0554 WP_002448786.1 UPI00019FC6E3 UniRef100_A0AAE5JNB0,UniRef50_O34153,UniRef90_Q4L607 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 15560 16378 . - . GCA_005502385.1_00975_gene GCA_005502385.1_00975 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNAYLAEFLGTAILILFGGGVCANVNLKRSAGQESDWIVIAAGWGLAVTMGVYAVGQFSGAHLNPAVSIALAVEGSFSWVKVPGYIVCQMLGGIVGATLVWLMYLPHWKATKDQGAKLGVFSTAPAIKNYFANFLSEIIGTAILSLGILFIGVNKIADGLNPLIVGSLIIAIGLSLGGPTGYAINPARDLGPRIAHAILPIAGKGGSNWWYAIVPVLGPIAGGMLGAVIYQVFYKNEFTFMSGVSIIVLIVTLLIGLALNKSNKHKDIESIY . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 15560 16378 . - . GCA_005502385.1_00975_mRNA GCA_005502385.1_00975 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNAYLAEFLGTAILILFGGGVCANVNLKRSAGQESDWIVIAAGWGLAVTMGVYAVGQFSGAHLNPAVSIALAVEGSFSWVKVPGYIVCQMLGGIVGATLVWLMYLPHWKATKDQGAKLGVFSTAPAIKNYFANFLSEIIGTAILSLGILFIGVNKIADGLNPLIVGSLIIAIGLSLGGPTGYAINPARDLGPRIAHAILPIAGKGGSNWWYAIVPVLGPIAGGMLGAVIYQVFYKNEFTFMSGVSIIVLIVTLLIGLALNKSNKHKDIESIY . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 15560 16378 . - 0 GCA_005502385.1_00975 GCA_005502385.1_00975_gene,GCA_005502385.1_00975_mRNA GCA_005502385.1_00975 Glycerol uptake facilitator protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNAYLAEFLGTAILILFGGGVCANVNLKRSAGQESDWIVIAAGWGLAVTMGVYAVGQFSGAHLNPAVSIALAVEGSFSWVKVPGYIVCQMLGGIVGATLVWLMYLPHWKATKDQGAKLGVFSTAPAIKNYFANFLSEIIGTAILSLGILFIGVNKIADGLNPLIVGSLIIAIGLSLGGPTGYAINPARDLGPRIAHAILPIAGKGGSNWWYAIVPVLGPIAGGMLGAVIYQVFYKNEFTFMSGVSIIVLIVTLLIGLALNKSNKHKDIESIY persistent 272 Aquaporin UniRef50_P18156,UniRef90_A0AAE5JLQ5 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 16629 17162 . - . GCA_005502385.1_00976_gene GCA_005502385.1_00976 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKEHVLPAIRNMKDLEKLIQTDYKVCVLLDMHVGHLRSIIELLKKHDIKAYIHIDLIKGMAHDEYACEYIIQTYKPKGIVSTKTKVIQKAKSLNVLTIFRVFIIDSQALNRSIQLIKKVDPDYVEVLPGIAHKIVENVREATTAKIIAGGLIEEEKEVNDAINSGASYVTTSNRKLW . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 16629 17162 . - . GCA_005502385.1_00976_mRNA GCA_005502385.1_00976 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKEHVLPAIRNMKDLEKLIQTDYKVCVLLDMHVGHLRSIIELLKKHDIKAYIHIDLIKGMAHDEYACEYIIQTYKPKGIVSTKTKVIQKAKSLNVLTIFRVFIIDSQALNRSIQLIKKVDPDYVEVLPGIAHKIVENVREATTAKIIAGGLIEEEKEVNDAINSGASYVTTSNRKLW . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 16629 17162 . - 0 GCA_005502385.1_00976 GCA_005502385.1_00976_gene,GCA_005502385.1_00976_mRNA GCA_005502385.1_00976 Glycerol uptake operon antiterminator regulatory protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKEHVLPAIRNMKDLEKLIQTDYKVCVLLDMHVGHLRSIIELLKKHDIKAYIHIDLIKGMAHDEYACEYIIQTYKPKGIVSTKTKVIQKAKSLNVLTIFRVFIIDSQALNRSIQLIKKVDPDYVEVLPGIAHKIVENVREATTAKIIAGGLIEEEKEVNDAINSGASYVTTSNRKLW persistent 177 Glycerol uptake operon antiterminator regulatory protein WP_137689506.1 UPI0010F7C7B4 UniRef100_UPI0010F7C7B4,UniRef50_Q2FYZ7,UniRef90_A0A4Q9WSD8 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 17178 19202 . - . GCA_005502385.1_00977_gene GCA_005502385.1_00977 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGKIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAKATEINIEVEQSGISSIRVVDNGTGIEQDDLQLVFHRHATSKINDDDDLFHIRTLGFRGEALASISSVAKVTLKTCTDNENGHEIYAENGEILSQKPAKAKKGTDIKVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPNIRFSLISDGKTMLKTNGSGRTNEVMAEIYGIKVAKDLVHISGDTSDYHLEGFVAKPEHSRSNKHYISIFINGRYIKNFALNKAITEGYHTLLTIGRYPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYNLIIEKIRHAFKDRILIPKNDLDRTPKKNKVLHTFEQQKIDFEQKQQNISNETKQLENKNDPNISTNNTFSTISHQYDEAHTSDDSYTREDNENSSVYNNKRSMDKDYFDIQKDILNSLDRAESSIDNTRHDETNIYNYDENDDFQENVTNQEEQDIKGKVSSTPSRRVPYMEVVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVSNEVQDLLIPLTFHFSKDEQLIIDQYREELDKVGVHLEHFGGYDYIVNSYPVWFPKVEAEEIIKDMIELVLNHKKIDVKKMREDAAIMMSCKKSIKANHYLKKNEMADLIDQLREAEDPFTCPHGRPIIINFSNYELEKLFKRVM . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 17178 19202 . - . GCA_005502385.1_00977_mRNA GCA_005502385.1_00977 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGKIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAKATEINIEVEQSGISSIRVVDNGTGIEQDDLQLVFHRHATSKINDDDDLFHIRTLGFRGEALASISSVAKVTLKTCTDNENGHEIYAENGEILSQKPAKAKKGTDIKVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPNIRFSLISDGKTMLKTNGSGRTNEVMAEIYGIKVAKDLVHISGDTSDYHLEGFVAKPEHSRSNKHYISIFINGRYIKNFALNKAITEGYHTLLTIGRYPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYNLIIEKIRHAFKDRILIPKNDLDRTPKKNKVLHTFEQQKIDFEQKQQNISNETKQLENKNDPNISTNNTFSTISHQYDEAHTSDDSYTREDNENSSVYNNKRSMDKDYFDIQKDILNSLDRAESSIDNTRHDETNIYNYDENDDFQENVTNQEEQDIKGKVSSTPSRRVPYMEVVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVSNEVQDLLIPLTFHFSKDEQLIIDQYREELDKVGVHLEHFGGYDYIVNSYPVWFPKVEAEEIIKDMIELVLNHKKIDVKKMREDAAIMMSCKKSIKANHYLKKNEMADLIDQLREAEDPFTCPHGRPIIINFSNYELEKLFKRVM . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 17178 19202 . - 0 GCA_005502385.1_00977 GCA_005502385.1_00977_gene,GCA_005502385.1_00977_mRNA GCA_005502385.1_00977 DNA mismatch repair protein MutL GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGKIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAKATEINIEVEQSGISSIRVVDNGTGIEQDDLQLVFHRHATSKINDDDDLFHIRTLGFRGEALASISSVAKVTLKTCTDNENGHEIYAENGEILSQKPAKAKKGTDIKVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPNIRFSLISDGKTMLKTNGSGRTNEVMAEIYGIKVAKDLVHISGDTSDYHLEGFVAKPEHSRSNKHYISIFINGRYIKNFALNKAITEGYHTLLTIGRYPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYNLIIEKIRHAFKDRILIPKNDLDRTPKKNKVLHTFEQQKIDFEQKQQNISNETKQLENKNDPNISTNNTFSTISHQYDEAHTSDDSYTREDNENSSVYNNKRSMDKDYFDIQKDILNSLDRAESSIDNTRHDETNIYNYDENDDFQENVTNQEEQDIKGKVSSTPSRRVPYMEVVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVSNEVQDLLIPLTFHFSKDEQLIIDQYREELDKVGVHLEHFGGYDYIVNSYPVWFPKVEAEEIIKDMIELVLNHKKIDVKKMREDAAIMMSCKKSIKANHYLKKNEMADLIDQLREAEDPFTCPHGRPIIINFSNYELEKLFKRVM persistent 674 mutL DNA mismatch repair endonuclease MutL GO:0005524,GO:0006298,GO:0016887,GO:0030983,GO:0032300 WP_037540998.1 UPI0004526C7C UniRef100_A0A3S7GSY9,UniRef50_Q93T05,UniRef90_A0A8X8KIP5 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 19215 21836 . - . GCA_005502385.1_00978_gene GCA_005502385.1_00978 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MANVTPMMQQYLKIKSQYQDCLLFFRLGDFYEMFFEDAKEASRVLEITLTKRDAKKENPIPMCGVPYHSANSYIETLINNGYKVAICEQMEDPKQTKGMVKREVVKVVTPGTMMEQGGMDENQNNYILSFIQNENGYALSYCDVSTGELKATNFEDESTLINEIITINPNEIVVREDINEDLKKQISLTTETITVREEISDMEYSVNTLENNLMFLTTQLLLDYIHHTQKRDLSHIEDVITYAAIDFMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTPMGARRLKQWIDRPLIHKDNIEQRLDIVESFIDHFIERDTLRSYLNQVYDIERLVGRVSYGNVNARDLIQLKHSISEIPNIKSLLEQMNSVTTTQFSTLEPLEDLLTVLEDSLVEEPPISVKDGGLFKQGFSKQLDEYLEASKNGKDWLAQLQAKERERTGIKSLKISYNKVFGYFIEITRANLQGFEPSEHGYHRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFIRLREHVKSYTERLQRQAKVISELDCLQSFAEIAQKYNYVRPKFSDDKTLNLENSRHPVVERVMDYNDYVPNDCYLDQNNFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCDNAILPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATADSLIIFDEIGRGTSTYDGLSLAQAMIEYVSETSHAKTLFSTHYHELTTLDQQLSSLKNVHVAADEYQGELIFLHKVKEGAVDDSYGIQVAKLANLPEKVIERAQVILKAFEQNGVLDENVHRQHYNDNSKDIENKNHLNNKEEHSTIKQTDVFEQTSFDLFNSNETQSEIEAQIKNLNISNMTPIEALLKLSELQNQLR . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 19215 21836 . - . GCA_005502385.1_00978_mRNA GCA_005502385.1_00978 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MANVTPMMQQYLKIKSQYQDCLLFFRLGDFYEMFFEDAKEASRVLEITLTKRDAKKENPIPMCGVPYHSANSYIETLINNGYKVAICEQMEDPKQTKGMVKREVVKVVTPGTMMEQGGMDENQNNYILSFIQNENGYALSYCDVSTGELKATNFEDESTLINEIITINPNEIVVREDINEDLKKQISLTTETITVREEISDMEYSVNTLENNLMFLTTQLLLDYIHHTQKRDLSHIEDVITYAAIDFMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTPMGARRLKQWIDRPLIHKDNIEQRLDIVESFIDHFIERDTLRSYLNQVYDIERLVGRVSYGNVNARDLIQLKHSISEIPNIKSLLEQMNSVTTTQFSTLEPLEDLLTVLEDSLVEEPPISVKDGGLFKQGFSKQLDEYLEASKNGKDWLAQLQAKERERTGIKSLKISYNKVFGYFIEITRANLQGFEPSEHGYHRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFIRLREHVKSYTERLQRQAKVISELDCLQSFAEIAQKYNYVRPKFSDDKTLNLENSRHPVVERVMDYNDYVPNDCYLDQNNFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCDNAILPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATADSLIIFDEIGRGTSTYDGLSLAQAMIEYVSETSHAKTLFSTHYHELTTLDQQLSSLKNVHVAADEYQGELIFLHKVKEGAVDDSYGIQVAKLANLPEKVIERAQVILKAFEQNGVLDENVHRQHYNDNSKDIENKNHLNNKEEHSTIKQTDVFEQTSFDLFNSNETQSEIEAQIKNLNISNMTPIEALLKLSELQNQLR . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 19215 21836 . - 0 GCA_005502385.1_00978 GCA_005502385.1_00978_gene,GCA_005502385.1_00978_mRNA GCA_005502385.1_00978 DNA mismatch repair protein MutS GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MANVTPMMQQYLKIKSQYQDCLLFFRLGDFYEMFFEDAKEASRVLEITLTKRDAKKENPIPMCGVPYHSANSYIETLINNGYKVAICEQMEDPKQTKGMVKREVVKVVTPGTMMEQGGMDENQNNYILSFIQNENGYALSYCDVSTGELKATNFEDESTLINEIITINPNEIVVREDINEDLKKQISLTTETITVREEISDMEYSVNTLENNLMFLTTQLLLDYIHHTQKRDLSHIEDVITYAAIDFMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTPMGARRLKQWIDRPLIHKDNIEQRLDIVESFIDHFIERDTLRSYLNQVYDIERLVGRVSYGNVNARDLIQLKHSISEIPNIKSLLEQMNSVTTTQFSTLEPLEDLLTVLEDSLVEEPPISVKDGGLFKQGFSKQLDEYLEASKNGKDWLAQLQAKERERTGIKSLKISYNKVFGYFIEITRANLQGFEPSEHGYHRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFIRLREHVKSYTERLQRQAKVISELDCLQSFAEIAQKYNYVRPKFSDDKTLNLENSRHPVVERVMDYNDYVPNDCYLDQNNFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCDNAILPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATADSLIIFDEIGRGTSTYDGLSLAQAMIEYVSETSHAKTLFSTHYHELTTLDQQLSSLKNVHVAADEYQGELIFLHKVKEGAVDDSYGIQVAKLANLPEKVIERAQVILKAFEQNGVLDENVHRQHYNDNSKDIENKNHLNNKEEHSTIKQTDVFEQTSFDLFNSNETQSEIEAQIKNLNISNMTPIEALLKLSELQNQLR persistent 873 mutS DNA mismatch repair protein MutS GO:0005524,GO:0006298,GO:0030983 UniRef50_Q2FYZ9,UniRef90_A0A974KYU9 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 22034 22522 . - . GCA_005502385.1_00979_gene GCA_005502385.1_00979 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKTKKLTITALLIAFNVVFSSFIIIPLGPVKAAPVQHFVNVLCAVFVGPWYGLAQALISSLIRIIFGTGSAFAFPGSMIGVFLASIFYMYRKHIFMAAVGEVIGTGIIGSLMCIPLSWILGLQHFFIKPLMLVFLVSSFLGAAISYILLIVLKKRGLLDKFK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 22034 22522 . - . GCA_005502385.1_00979_mRNA GCA_005502385.1_00979 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKTKKLTITALLIAFNVVFSSFIIIPLGPVKAAPVQHFVNVLCAVFVGPWYGLAQALISSLIRIIFGTGSAFAFPGSMIGVFLASIFYMYRKHIFMAAVGEVIGTGIIGSLMCIPLSWILGLQHFFIKPLMLVFLVSSFLGAAISYILLIVLKKRGLLDKFK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 22034 22522 . - 0 GCA_005502385.1_00979 GCA_005502385.1_00979_gene,GCA_005502385.1_00979_mRNA GCA_005502385.1_00979 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKTKKLTITALLIAFNVVFSSFIIIPLGPVKAAPVQHFVNVLCAVFVGPWYGLAQALISSLIRIIFGTGSAFAFPGSMIGVFLASIFYMYRKHIFMAAVGEVIGTGIIGSLMCIPLSWILGLQHFFIKPLMLVFLVSSFLGAAISYILLIVLKKRGLLDKFK persistent 162 thiW energy coupling factor transporter S component ThiW GO:0005215,GO:0006810,GO:0009228 WP_017174631.1 UPI0002D2B101 UniRef100_A0A4Q9WTI0,UniRef50_Q2FZ00,UniRef90_A0A974KVT7 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 22543 22911 . - . GCA_005502385.1_00980_gene GCA_005502385.1_00980 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MYEKEDILKQADSVSNKIKGLELIKQYQNVEQQIHENSSIDQKMKQLKLQQKQSVNFQNYGKHQAYQKSEKEISQLEKEINALPIVEEFRSAQFEANEFLQLMVSTMEQSLNKHNEKAHHDS . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 22543 22911 . - . GCA_005502385.1_00980_mRNA GCA_005502385.1_00980 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MYEKEDILKQADSVSNKIKGLELIKQYQNVEQQIHENSSIDQKMKQLKLQQKQSVNFQNYGKHQAYQKSEKEISQLEKEINALPIVEEFRSAQFEANEFLQLMVSTMEQSLNKHNEKAHHDS . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 22543 22911 . - 0 GCA_005502385.1_00980 GCA_005502385.1_00980_gene,GCA_005502385.1_00980_mRNA GCA_005502385.1_00980 putative protein YmcA GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MYEKEDILKQADSVSNKIKGLELIKQYQNVEQQIHENSSIDQKMKQLKLQQKQSVNFQNYGKHQAYQKSEKEISQLEKEINALPIVEEFRSAQFEANEFLQLMVSTMEQSLNKHNEKAHHDS persistent 122 ylbF YlbF family regulator WP_049416231.1 UPI00066EB5BC UniRef100_UPI00066EB5BC,UniRef50_Q49X86,UniRef90_A0A974KVM2 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 22913 24457 . - . GCA_005502385.1_00981_gene GCA_005502385.1_00981 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNEEQRKAGTIDILNERNKKAEKDYSKYFEHVYQPPNLKEAKKRGKQDVQYNRDFHIEDKYKGMGKGRTFLIKTYGCQMNAHDTEVMAGILQALDYQATDDINEADVILINTCAIRENAENKVFSEIGNLKHLKKNRPETLIGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHKLPEILEEAYLSKAMVVEVWSKEGDVIENLPKVREGSTKAWVNIMYGCDKFCTYCIVPFTRGKERSRRPQDIIEEVRGLAREGYKEITLLGQNVNSYGKDIKDLDYGLGDLLEDISKIDIPRVRFTTSHPWDFTDRMIEVIAKGGNIVPHIHLPVQSGNNAVLKIMGRKYSRESYLDLVDRIKEAIPNVALTTDIIVGYPNETEEQFEETLSLYDEVQFEHAYTYLYSQRDGTPAAKMKDNVPTEVKKDRLQRLNKKVGQYSEKAMQHYEGQVVTVLCEGTSKKDETVLAGYTEKNKLVNFKGPREAIGQLVDVKIKEAKQYSLNGEFLHFHNQVMVTN . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 22913 24457 . - . GCA_005502385.1_00981_mRNA GCA_005502385.1_00981 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNEEQRKAGTIDILNERNKKAEKDYSKYFEHVYQPPNLKEAKKRGKQDVQYNRDFHIEDKYKGMGKGRTFLIKTYGCQMNAHDTEVMAGILQALDYQATDDINEADVILINTCAIRENAENKVFSEIGNLKHLKKNRPETLIGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHKLPEILEEAYLSKAMVVEVWSKEGDVIENLPKVREGSTKAWVNIMYGCDKFCTYCIVPFTRGKERSRRPQDIIEEVRGLAREGYKEITLLGQNVNSYGKDIKDLDYGLGDLLEDISKIDIPRVRFTTSHPWDFTDRMIEVIAKGGNIVPHIHLPVQSGNNAVLKIMGRKYSRESYLDLVDRIKEAIPNVALTTDIIVGYPNETEEQFEETLSLYDEVQFEHAYTYLYSQRDGTPAAKMKDNVPTEVKKDRLQRLNKKVGQYSEKAMQHYEGQVVTVLCEGTSKKDETVLAGYTEKNKLVNFKGPREAIGQLVDVKIKEAKQYSLNGEFLHFHNQVMVTN . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 22913 24457 . - 0 GCA_005502385.1_00981 GCA_005502385.1_00981_gene,GCA_005502385.1_00981_mRNA GCA_005502385.1_00981 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNEEQRKAGTIDILNERNKKAEKDYSKYFEHVYQPPNLKEAKKRGKQDVQYNRDFHIEDKYKGMGKGRTFLIKTYGCQMNAHDTEVMAGILQALDYQATDDINEADVILINTCAIRENAENKVFSEIGNLKHLKKNRPETLIGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHKLPEILEEAYLSKAMVVEVWSKEGDVIENLPKVREGSTKAWVNIMYGCDKFCTYCIVPFTRGKERSRRPQDIIEEVRGLAREGYKEITLLGQNVNSYGKDIKDLDYGLGDLLEDISKIDIPRVRFTTSHPWDFTDRMIEVIAKGGNIVPHIHLPVQSGNNAVLKIMGRKYSRESYLDLVDRIKEAIPNVALTTDIIVGYPNETEEQFEETLSLYDEVQFEHAYTYLYSQRDGTPAAKMKDNVPTEVKKDRLQRLNKKVGQYSEKAMQHYEGQVVTVLCEGTSKKDETVLAGYTEKNKLVNFKGPREAIGQLVDVKIKEAKQYSLNGEFLHFHNQVMVTN persistent 514 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 2.8.4.3 GO:0006400,GO:0016782,GO:0051539,GO:1904047 UniRef50_O31778,UniRef90_A0A3S7GSG5 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 24642 24938 . - . GCA_005502385.1_00982_gene GCA_005502385.1_00982 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQDTLMSVQIVPKTPNNDDVIPYVDEAIKIIDQSGLHYRVGPLETTVQGDMSECLILIQKLNERMVELECPSIISQVKFYHVPEGISIETLTGKYDEA . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 24642 24938 . - . GCA_005502385.1_00982_mRNA GCA_005502385.1_00982 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQDTLMSVQIVPKTPNNDDVIPYVDEAIKIIDQSGLHYRVGPLETTVQGDMSECLILIQKLNERMVELECPSIISQVKFYHVPEGISIETLTGKYDEA . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 24642 24938 . - 0 GCA_005502385.1_00982 GCA_005502385.1_00982_gene,GCA_005502385.1_00982_mRNA GCA_005502385.1_00982 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQDTLMSVQIVPKTPNNDDVIPYVDEAIKIIDQSGLHYRVGPLETTVQGDMSECLILIQKLNERMVELECPSIISQVKFYHVPEGISIETLTGKYDEA persistent 98 yqgV Thiamine-binding protein domain-containing protein COG0011,H WP_002448768.1 UPI00019FC6EB UniRef100_A0A8X8GP05,UniRef50_Q49X83,UniRef90_Q5HPP9 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 25002 25625 . - . GCA_005502385.1_00983_gene GCA_005502385.1_00983 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLDKFKSMQELEKETIENEDWKIITRNRNSSVSILAIHGGGIEPATTELASIIADEGGYNYFIFEGLRSKGNKELHVTSTRYDNKDAMNLVTESNQAIAIHGCEGNESIAYVGGKDERLKSLIKEQLNHIGIKAKEAPSHISGQQDNNIVNCTTRGRGVQIELTTSLRKAFFKNNKINRKSRENQSNWDKLMYDFAKAIKSAIENIE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 25002 25625 . - . GCA_005502385.1_00983_mRNA GCA_005502385.1_00983 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLDKFKSMQELEKETIENEDWKIITRNRNSSVSILAIHGGGIEPATTELASIIADEGGYNYFIFEGLRSKGNKELHVTSTRYDNKDAMNLVTESNQAIAIHGCEGNESIAYVGGKDERLKSLIKEQLNHIGIKAKEAPSHISGQQDNNIVNCTTRGRGVQIELTTSLRKAFFKNNKINRKSRENQSNWDKLMYDFAKAIKSAIENIE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 25002 25625 . - 0 GCA_005502385.1_00983 GCA_005502385.1_00983_gene,GCA_005502385.1_00983_mRNA GCA_005502385.1_00983 hypothetical protein UPF0714 protein YndL GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLDKFKSMQELEKETIENEDWKIITRNRNSSVSILAIHGGGIEPATTELASIIADEGGYNYFIFEGLRSKGNKELHVTSTRYDNKDAMNLVTESNQAIAIHGCEGNESIAYVGGKDERLKSLIKEQLNHIGIKAKEAPSHISGQQDNNIVNCTTRGRGVQIELTTSLRKAFFKNNKINRKSRENQSNWDKLMYDFAKAIKSAIENIE persistent 207 Phage-related replication protein UniRef50_A0AAP8PRJ4,UniRef90_A0AAE5JLQ1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 25769 26635 . - . GCA_005502385.1_00984_gene GCA_005502385.1_00984 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MATFKDFRNSVKPNWCPGCGDFSVQAAIQKAAANLGLEPEEVALITGIGCSGRLSGYINSYGVHGIHGRALPLAQGVKMANKDLTVIASGGDGDGYAIGMGHTIHALRRNMNITYIVMDNQIYGLTKGQTSPSSAVGFVTKSTPKGNIEKNVAPLELALSSGATFVAQGFSSDIKALTKLIEDAINHDGFSFVNVFSPCVTYNKMNTYDWFKEHLTSIEDIENYDPTDKQLAMKTVLEHESLVKGIVYQDTTTPSYESQIEELDESALTKRDIRLSEQEFNDLTAQFV . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 25769 26635 . - . GCA_005502385.1_00984_mRNA GCA_005502385.1_00984 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MATFKDFRNSVKPNWCPGCGDFSVQAAIQKAAANLGLEPEEVALITGIGCSGRLSGYINSYGVHGIHGRALPLAQGVKMANKDLTVIASGGDGDGYAIGMGHTIHALRRNMNITYIVMDNQIYGLTKGQTSPSSAVGFVTKSTPKGNIEKNVAPLELALSSGATFVAQGFSSDIKALTKLIEDAINHDGFSFVNVFSPCVTYNKMNTYDWFKEHLTSIEDIENYDPTDKQLAMKTVLEHESLVKGIVYQDTTTPSYESQIEELDESALTKRDIRLSEQEFNDLTAQFV . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 25769 26635 . - 0 GCA_005502385.1_00984 GCA_005502385.1_00984_gene,GCA_005502385.1_00984_mRNA GCA_005502385.1_00984 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MATFKDFRNSVKPNWCPGCGDFSVQAAIQKAAANLGLEPEEVALITGIGCSGRLSGYINSYGVHGIHGRALPLAQGVKMANKDLTVIASGGDGDGYAIGMGHTIHALRRNMNITYIVMDNQIYGLTKGQTSPSSAVGFVTKSTPKGNIEKNVAPLELALSSGATFVAQGFSSDIKALTKLIEDAINHDGFSFVNVFSPCVTYNKMNTYDWFKEHLTSIEDIENYDPTDKQLAMKTVLEHESLVKGIVYQDTTTPSYESQIEELDESALTKRDIRLSEQEFNDLTAQFV persistent 288 2-oxoglutarate ferredoxin oxidoreductase subunit beta UniRef50_A0A239ZH51,UniRef90_A0A380H4M1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 26636 28396 . - . GCA_005502385.1_00985_gene GCA_005502385.1_00985 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKPQISWKVGGQQGEGIESTGEIFATAMNRKGYYLYGYRHFSSRIKGGHTNNKIRVSTSPVHAISDDLDILVAFDQETIELNHHEMREDSIIIADAKAKPSKPEHCRAQLIELPLTLTAKELGTALMKNMVAIGATCAVMKLDTTTFETLITNMFTKKGQKVVEMNIEALHQGYELMKDKLDTVNGDYLLEDSEGTPHLYMIGNDAIGLGAISAGSRFMAAYPITPASEIMEYMIANVPKVGGTVVQTEDEIAAANMAIGANYAGVRAFTASAGPGLSLMMEAIGLSGMTETPLVIVNTQRGGPSTGLPTKQEQSDLMQMIYGTHGDIPKIVVAPTDAEDAFYLTMEAFNLAEEYQCPVIVLSDLQLSLGKQTVKQLDYNRIQIKRGELIQSDIERDEDDRSYFKRYALTTSGISQRPIPGVKGGIHHVTGVEHNQEGKPSEAADNRREQMEKRMSKTANLLIETPVDYDEKHEKADILYIGFISSKGAIEEGSKRLNNNGIKVNTMQIRQLHPLPKDIIQQAIDKASSVIVAEHNYQGQLSNILKMNTAIQDKLVNQTKYDGTPFLPHEIEEKGLSVAKDMKEMM . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 26636 28396 . - . GCA_005502385.1_00985_mRNA GCA_005502385.1_00985 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKPQISWKVGGQQGEGIESTGEIFATAMNRKGYYLYGYRHFSSRIKGGHTNNKIRVSTSPVHAISDDLDILVAFDQETIELNHHEMREDSIIIADAKAKPSKPEHCRAQLIELPLTLTAKELGTALMKNMVAIGATCAVMKLDTTTFETLITNMFTKKGQKVVEMNIEALHQGYELMKDKLDTVNGDYLLEDSEGTPHLYMIGNDAIGLGAISAGSRFMAAYPITPASEIMEYMIANVPKVGGTVVQTEDEIAAANMAIGANYAGVRAFTASAGPGLSLMMEAIGLSGMTETPLVIVNTQRGGPSTGLPTKQEQSDLMQMIYGTHGDIPKIVVAPTDAEDAFYLTMEAFNLAEEYQCPVIVLSDLQLSLGKQTVKQLDYNRIQIKRGELIQSDIERDEDDRSYFKRYALTTSGISQRPIPGVKGGIHHVTGVEHNQEGKPSEAADNRREQMEKRMSKTANLLIETPVDYDEKHEKADILYIGFISSKGAIEEGSKRLNNNGIKVNTMQIRQLHPLPKDIIQQAIDKASSVIVAEHNYQGQLSNILKMNTAIQDKLVNQTKYDGTPFLPHEIEEKGLSVAKDMKEMM . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 26636 28396 . - 0 GCA_005502385.1_00985 GCA_005502385.1_00985_gene,GCA_005502385.1_00985_mRNA GCA_005502385.1_00985 2-oxoglutarate oxidoreductase subunit KorA GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKPQISWKVGGQQGEGIESTGEIFATAMNRKGYYLYGYRHFSSRIKGGHTNNKIRVSTSPVHAISDDLDILVAFDQETIELNHHEMREDSIIIADAKAKPSKPEHCRAQLIELPLTLTAKELGTALMKNMVAIGATCAVMKLDTTTFETLITNMFTKKGQKVVEMNIEALHQGYELMKDKLDTVNGDYLLEDSEGTPHLYMIGNDAIGLGAISAGSRFMAAYPITPASEIMEYMIANVPKVGGTVVQTEDEIAAANMAIGANYAGVRAFTASAGPGLSLMMEAIGLSGMTETPLVIVNTQRGGPSTGLPTKQEQSDLMQMIYGTHGDIPKIVVAPTDAEDAFYLTMEAFNLAEEYQCPVIVLSDLQLSLGKQTVKQLDYNRIQIKRGELIQSDIERDEDDRSYFKRYALTTSGISQRPIPGVKGGIHHVTGVEHNQEGKPSEAADNRREQMEKRMSKTANLLIETPVDYDEKHEKADILYIGFISSKGAIEEGSKRLNNNGIKVNTMQIRQLHPLPKDIIQQAIDKASSVIVAEHNYQGQLSNILKMNTAIQDKLVNQTKYDGTPFLPHEIEEKGLSVAKDMKEMM persistent 586 2-oxoacid:acceptor oxidoreductase subunit alpha 1.2.7.11,1.2.7.3 WP_017174626.1 UPI0002FD61AB UniRef100_A0A4Q9WSD9,UniRef50_A0A840PSQ9,UniRef90_A0A4Q9WSD9 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 28506 29300 . - . GCA_005502385.1_00986_gene GCA_005502385.1_00986 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRILFIGDIVGKVGRNTIAEYLPKLKQAYKPTLSIVNAENAAHGKGLTEKLYKQLLRDGVDFMTMGNHTYGQREIYDFIDDAKRMIRPANFPSEAPGVGMRFIQVNDIKVAIINLQGRSFMQDIDDPFKKADQLIEEAKKETNYIFVDFHAETTSEKNAMGWYLDGRVSAVVGTHTHIQTSDERILPNGTGYITDVGMTGYYDGILGINREEVIKRFITSLPQRHVVPDNGRSVLSGVIIDLDKNGRTKLIERILINEDHPFDK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 28506 29300 . - . GCA_005502385.1_00986_mRNA GCA_005502385.1_00986 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRILFIGDIVGKVGRNTIAEYLPKLKQAYKPTLSIVNAENAAHGKGLTEKLYKQLLRDGVDFMTMGNHTYGQREIYDFIDDAKRMIRPANFPSEAPGVGMRFIQVNDIKVAIINLQGRSFMQDIDDPFKKADQLIEEAKKETNYIFVDFHAETTSEKNAMGWYLDGRVSAVVGTHTHIQTSDERILPNGTGYITDVGMTGYYDGILGINREEVIKRFITSLPQRHVVPDNGRSVLSGVIIDLDKNGRTKLIERILINEDHPFDK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 28506 29300 . - 0 GCA_005502385.1_00986 GCA_005502385.1_00986_gene,GCA_005502385.1_00986_mRNA GCA_005502385.1_00986 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRILFIGDIVGKVGRNTIAEYLPKLKQAYKPTLSIVNAENAAHGKGLTEKLYKQLLRDGVDFMTMGNHTYGQREIYDFIDDAKRMIRPANFPSEAPGVGMRFIQVNDIKVAIINLQGRSFMQDIDDPFKKADQLIEEAKKETNYIFVDFHAETTSEKNAMGWYLDGRVSAVVGTHTHIQTSDERILPNGTGYITDVGMTGYYDGILGINREEVIKRFITSLPQRHVVPDNGRSVLSGVIIDLDKNGRTKLIERILINEDHPFDK persistent 264 ymdB Metallophosphoesterase 3.1.4.16 COG1692,T WP_017174625.1 UPI0002E85AB9 UniRef100_A0A4Q9WSE7,UniRef50_O31775,UniRef90_A0A2A1KFN5 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 29454 29669 . + . GCA_005502385.1_00987_gene GCA_005502385.1_00987 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSINIDPEKFAELVVKANPSKSEDAEDIAKESLELYINAYRLAERYSNIATNCYDTAEILSEIKKTDLQLK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 29454 29669 . + . GCA_005502385.1_00987_mRNA GCA_005502385.1_00987 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSINIDPEKFAELVVKANPSKSEDAEDIAKESLELYINAYRLAERYSNIATNCYDTAEILSEIKKTDLQLK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 29454 29669 . + 0 GCA_005502385.1_00987 GCA_005502385.1_00987_gene,GCA_005502385.1_00987_mRNA GCA_005502385.1_00987 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSINIDPEKFAELVVKANPSKSEDAEDIAKESLELYINAYRLAERYSNIATNCYDTAEILSEIKKTDLQLK persistent 71 Phage protein WP_137689510.1 UPI0010F5E361 UniRef100_UPI0010F5E361,UniRef50_Q2FZ07,UniRef90_A0A1J6ETT3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 29743 31302 . - . GCA_005502385.1_00988_gene GCA_005502385.1_00988 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNLLDLLLILLGIILGVVVGYFLARNILHQKQIQARQTANDIIKQGQKEADNIKKEKLLEAKEENQIIREQVETELRERRSELQRQEARNLQKEENLDRKSELLDKKDEILDQKESKIEERQQQVDAKESSVQTLIMKHEQELERISGLTQEEAVNEQLHRVEEELSQDIAVLVKEKEREAKEKVNKTAKELLATTVQRLAADHTTESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGIDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDGRIHPGRIEEMVDKARKEVDDIIRDAGEQATFEINVHNMHPDLVKILGRLNYRTSYGQNVLKHSMEVAHLSGMLAAELGEDVSLAKRAGLLHDVGKAIDHEVEGSHVEIGVELAKKYGEVETVINAIHSHHGDVEPTSIISILVAAADALSAARPGARKETLENYIRRLERLETLSESYEGVEKAFAIQAGREIRVIVSPEEIDDLKSYRLARDIKNQIEEELQYPGHIKVTVVRETRAVEYAK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 29743 31302 . - . GCA_005502385.1_00988_mRNA GCA_005502385.1_00988 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNLLDLLLILLGIILGVVVGYFLARNILHQKQIQARQTANDIIKQGQKEADNIKKEKLLEAKEENQIIREQVETELRERRSELQRQEARNLQKEENLDRKSELLDKKDEILDQKESKIEERQQQVDAKESSVQTLIMKHEQELERISGLTQEEAVNEQLHRVEEELSQDIAVLVKEKEREAKEKVNKTAKELLATTVQRLAADHTTESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGIDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDGRIHPGRIEEMVDKARKEVDDIIRDAGEQATFEINVHNMHPDLVKILGRLNYRTSYGQNVLKHSMEVAHLSGMLAAELGEDVSLAKRAGLLHDVGKAIDHEVEGSHVEIGVELAKKYGEVETVINAIHSHHGDVEPTSIISILVAAADALSAARPGARKETLENYIRRLERLETLSESYEGVEKAFAIQAGREIRVIVSPEEIDDLKSYRLARDIKNQIEEELQYPGHIKVTVVRETRAVEYAK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 29743 31302 . - 0 GCA_005502385.1_00988 GCA_005502385.1_00988_gene,GCA_005502385.1_00988_mRNA GCA_005502385.1_00988 Ribonuclease Y GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNLLDLLLILLGIILGVVVGYFLARNILHQKQIQARQTANDIIKQGQKEADNIKKEKLLEAKEENQIIREQVETELRERRSELQRQEARNLQKEENLDRKSELLDKKDEILDQKESKIEERQQQVDAKESSVQTLIMKHEQELERISGLTQEEAVNEQLHRVEEELSQDIAVLVKEKEREAKEKVNKTAKELLATTVQRLAADHTTESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGIDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDGRIHPGRIEEMVDKARKEVDDIIRDAGEQATFEINVHNMHPDLVKILGRLNYRTSYGQNVLKHSMEVAHLSGMLAAELGEDVSLAKRAGLLHDVGKAIDHEVEGSHVEIGVELAKKYGEVETVINAIHSHHGDVEPTSIISILVAAADALSAARPGARKETLENYIRRLERLETLSESYEGVEKAFAIQAGREIRVIVSPEEIDDLKSYRLARDIKNQIEEELQYPGHIKVTVVRETRAVEYAK persistent 519 rny ribonuclease Y 3.1.-.- GO:0003723,GO:0004521,GO:0005886,GO:0006402,GO:0016020 COG1418,JR WP_002448856.1 UPI00019FC6F1 UniRef100_A0A1K1V715,UniRef50_O31774,UniRef90_Q2FZ08 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 31566 32612 . - . GCA_005502385.1_00989_gene GCA_005502385.1_00989 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDNDRQKALDTVIKNMEKSFGKGAVMKLGDNKGRRVSSVSSGSVTLDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIAEVQKNGGVAAFIDAEHALDPVYAEALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDIVGNRTKIKVVKNKVAPPFRIAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGERMGQGKENVKTYLKENPQIKDEIDRKLREKLGIFDGDVEENEDKSSQTLFDEE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 31566 32612 . - . GCA_005502385.1_00989_mRNA GCA_005502385.1_00989 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDNDRQKALDTVIKNMEKSFGKGAVMKLGDNKGRRVSSVSSGSVTLDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIAEVQKNGGVAAFIDAEHALDPVYAEALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDIVGNRTKIKVVKNKVAPPFRIAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGERMGQGKENVKTYLKENPQIKDEIDRKLREKLGIFDGDVEENEDKSSQTLFDEE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 31566 32612 . - 0 GCA_005502385.1_00989 GCA_005502385.1_00989_gene,GCA_005502385.1_00989_mRNA GCA_005502385.1_00989 Protein RecA GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDNDRQKALDTVIKNMEKSFGKGAVMKLGDNKGRRVSSVSSGSVTLDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIAEVQKNGGVAAFIDAEHALDPVYAEALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDIVGNRTKIKVVKNKVAPPFRIAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGERMGQGKENVKTYLKENPQIKDEIDRKLREKLGIFDGDVEENEDKSSQTLFDEE persistent 348 recA recombinase RecA GO:0003677,GO:0003684,GO:0003697,GO:0005524,GO:0005829,GO:0006281,GO:0006310,GO:0008094,GO:0009432,GO:0016887,GO:0140664 COG0468,L WP_002448773.1 UPI00019FC6F2 UniRef100_A0A1L8Y9S1,UniRef50_P0A452,UniRef90_Q5HPQ6 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 32790 33929 . - . GCA_005502385.1_00990_gene GCA_005502385.1_00990 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNISIIAVGSELLLGQIANTNGQYLSKLFNQIGKNIVEHTVIGDNPDRLEFIIREGLKRFDTLVLTGGLGPTKDDLTKHTVAKVLNKNLVTNEEALNYIEDFFKEQGQEMTPNNKQQALVVEGAKVLKNHYGMAPGMFIEMDNKKVILLPGPPSEMQPMAKNELLPLLIDNDNTIFSEQLRFAGIGESKVETEVMDLIEKQTNPTIAPLAGKHEVYIRLTANASTQSECKTLIQPIKEEILERIGQFYYGSDDTLLEQSVMEQMNSTVSIYDGVTDGAIYTRLKRFDKQNILKGILPDNDIFLNHHSSIEIQLRDASSYVKDLYKTEMGIAILHEKENVYLAINTKDDFKMTTFKITQSRNILPNRSQNYVLIRLLNWH . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 32790 33929 . - . GCA_005502385.1_00990_mRNA GCA_005502385.1_00990 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNISIIAVGSELLLGQIANTNGQYLSKLFNQIGKNIVEHTVIGDNPDRLEFIIREGLKRFDTLVLTGGLGPTKDDLTKHTVAKVLNKNLVTNEEALNYIEDFFKEQGQEMTPNNKQQALVVEGAKVLKNHYGMAPGMFIEMDNKKVILLPGPPSEMQPMAKNELLPLLIDNDNTIFSEQLRFAGIGESKVETEVMDLIEKQTNPTIAPLAGKHEVYIRLTANASTQSECKTLIQPIKEEILERIGQFYYGSDDTLLEQSVMEQMNSTVSIYDGVTDGAIYTRLKRFDKQNILKGILPDNDIFLNHHSSIEIQLRDASSYVKDLYKTEMGIAILHEKENVYLAINTKDDFKMTTFKITQSRNILPNRSQNYVLIRLLNWH . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 32790 33929 . - 0 GCA_005502385.1_00990 GCA_005502385.1_00990_gene,GCA_005502385.1_00990_mRNA GCA_005502385.1_00990 Putative competence-damage inducible protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNISIIAVGSELLLGQIANTNGQYLSKLFNQIGKNIVEHTVIGDNPDRLEFIIREGLKRFDTLVLTGGLGPTKDDLTKHTVAKVLNKNLVTNEEALNYIEDFFKEQGQEMTPNNKQQALVVEGAKVLKNHYGMAPGMFIEMDNKKVILLPGPPSEMQPMAKNELLPLLIDNDNTIFSEQLRFAGIGESKVETEVMDLIEKQTNPTIAPLAGKHEVYIRLTANASTQSECKTLIQPIKEEILERIGQFYYGSDDTLLEQSVMEQMNSTVSIYDGVTDGAIYTRLKRFDKQNILKGILPDNDIFLNHHSSIEIQLRDASSYVKDLYKTEMGIAILHEKENVYLAINTKDDFKMTTFKITQSRNILPNRSQNYVLIRLLNWH persistent 379 Putative competence-damage inducible protein WP_049420544.1 UPI00066C0AD4 UniRef100_UPI00066C0AD4,UniRef50_A0A380G809,UniRef90_A0A8X8KFH3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 34062 34637 . - . GCA_005502385.1_00991_gene GCA_005502385.1_00991 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNIPNQITVFRVILIPVFILFALVNFGFGSVSVLGGYDIRIEQLIAAIIFIVASLSDFLDGYLARKWQLVTNMGKFLDPLADKLLVSSALIVMVQLGLTNSVVAIIIIAREFAVTGLRLLQIEQGFVSAAGQLGKIKTAVTMVAIIWILLGDLFSNWIGFQLGQVLLYIGVFFTILSGIEYFYKGRDVFKQ . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 34062 34637 . - . GCA_005502385.1_00991_mRNA GCA_005502385.1_00991 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNIPNQITVFRVILIPVFILFALVNFGFGSVSVLGGYDIRIEQLIAAIIFIVASLSDFLDGYLARKWQLVTNMGKFLDPLADKLLVSSALIVMVQLGLTNSVVAIIIIAREFAVTGLRLLQIEQGFVSAAGQLGKIKTAVTMVAIIWILLGDLFSNWIGFQLGQVLLYIGVFFTILSGIEYFYKGRDVFKQ . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 34062 34637 . - 0 GCA_005502385.1_00991 GCA_005502385.1_00991_gene,GCA_005502385.1_00991_mRNA GCA_005502385.1_00991 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNIPNQITVFRVILIPVFILFALVNFGFGSVSVLGGYDIRIEQLIAAIIFIVASLSDFLDGYLARKWQLVTNMGKFLDPLADKLLVSSALIVMVQLGLTNSVVAIIIIAREFAVTGLRLLQIEQGFVSAAGQLGKIKTAVTMVAIIWILLGDLFSNWIGFQLGQVLLYIGVFFTILSGIEYFYKGRDVFKQ persistent 191 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2.7.8.5 GO:0008444,GO:0008654,GO:0016020 COG0558,I WP_017174623.1 UPI0002ED1BB3 UniRef100_A0A4Q9WSF0,UniRef50_Q8DMX8,UniRef90_A0A5B2YSM1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 34670 35062 . - . GCA_005502385.1_00992_gene GCA_005502385.1_00992 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKTIGETLKGRRERLGMTLTELEQRTQLKRETLKYIEENKFDQLAKVDYAEGFIRRYASVVNMDVNQLIKVHHEEIPNQHNQLDTLLHHYRHNEVPEYRTKNKEPIQLLIMISIVIIITFIMWVLAVLLI . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 34670 35062 . - . GCA_005502385.1_00992_mRNA GCA_005502385.1_00992 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKTIGETLKGRRERLGMTLTELEQRTQLKRETLKYIEENKFDQLAKVDYAEGFIRRYASVVNMDVNQLIKVHHEEIPNQHNQLDTLLHHYRHNEVPEYRTKNKEPIQLLIMISIVIIITFIMWVLAVLLI . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 34670 35062 . - 0 GCA_005502385.1_00992 GCA_005502385.1_00992_gene,GCA_005502385.1_00992_mRNA GCA_005502385.1_00992 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKTIGETLKGRRERLGMTLTELEQRTQLKRETLKYIEENKFDQLAKVDYAEGFIRRYASVVNMDVNQLIKVHHEEIPNQHNQLDTLLHHYRHNEVPEYRTKNKEPIQLLIMISIVIIITFIMWVLAVLLI persistent 130 Helix-turn-helix domain-containing protein WP_017174622.1 UPI0002F4B386 UniRef100_A0A4Q9WVF2,UniRef50_Q2FZ12,UniRef90_A0A974KVN1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 35083 35925 . - . GCA_005502385.1_00993_gene GCA_005502385.1_00993 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTVAKKKEWYLEYEIIVNRAGLLGDVSSLLGMLGISIITINGVDQGRRGLLIKTDSLEKVTRFENIIHELKEIEITKLRIPELRDRLAVRHGRYIEQDAGDKKTFRFEREDLGLLVDFLAELFKEDGHKLIGIRGMPRVGKTESIVAGSVCAHKRWLFISSTLIKQTVRSSLIKGEYDANHVYIIDGAVTARETNPKHQQLVEEVMTLPSIKVVEHPDLFIETNQYSIDDFDYIIELREHENQKIEYDHMKQQVKQQAIKSKNTLDFGEDVFGGGFGFFE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 35083 35925 . - . GCA_005502385.1_00993_mRNA GCA_005502385.1_00993 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTVAKKKEWYLEYEIIVNRAGLLGDVSSLLGMLGISIITINGVDQGRRGLLIKTDSLEKVTRFENIIHELKEIEITKLRIPELRDRLAVRHGRYIEQDAGDKKTFRFEREDLGLLVDFLAELFKEDGHKLIGIRGMPRVGKTESIVAGSVCAHKRWLFISSTLIKQTVRSSLIKGEYDANHVYIIDGAVTARETNPKHQQLVEEVMTLPSIKVVEHPDLFIETNQYSIDDFDYIIELREHENQKIEYDHMKQQVKQQAIKSKNTLDFGEDVFGGGFGFFE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 35083 35925 . - 0 GCA_005502385.1_00993 GCA_005502385.1_00993_gene,GCA_005502385.1_00993_mRNA GCA_005502385.1_00993 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTVAKKKEWYLEYEIIVNRAGLLGDVSSLLGMLGISIITINGVDQGRRGLLIKTDSLEKVTRFENIIHELKEIEITKLRIPELRDRLAVRHGRYIEQDAGDKKTFRFEREDLGLLVDFLAELFKEDGHKLIGIRGMPRVGKTESIVAGSVCAHKRWLFISSTLIKQTVRSSLIKGEYDANHVYIIDGAVTARETNPKHQQLVEEVMTLPSIKVVEHPDLFIETNQYSIDDFDYIIELREHENQKIEYDHMKQQVKQQAIKSKNTLDFGEDVFGGGFGFFE persistent 280 DUF3388 domain-containing protein WP_002448864.1 UPI00019FC6F6 UniRef100_A0A1L8Y9Q9,UniRef50_Q49X69,UniRef90_A0A974KW94 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 36044 36748 . - . GCA_005502385.1_00994_gene GCA_005502385.1_00994 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKALVFGGSGSIGSAIVDRLLKEGYEVVLQYYQSDISSLEKKYKGEAVEFIQMDLTHDIDLNDIFSHIKQLDCLIYSSGTSLYGMLQDMKDKEIDECYHIHVKQLIRCCRYFIDLLRKSTNGRIIVISSIWGETGASMETIYSAMKSAQIGFVKALSQELALTNVTVNAIAPGFVSGRMAKAFSDEEKAVILSELPQQRMIAPQEVAHVCAYLCHPNAKSITGTVQKVNGGWYI . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 36044 36748 . - . GCA_005502385.1_00994_mRNA GCA_005502385.1_00994 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKALVFGGSGSIGSAIVDRLLKEGYEVVLQYYQSDISSLEKKYKGEAVEFIQMDLTHDIDLNDIFSHIKQLDCLIYSSGTSLYGMLQDMKDKEIDECYHIHVKQLIRCCRYFIDLLRKSTNGRIIVISSIWGETGASMETIYSAMKSAQIGFVKALSQELALTNVTVNAIAPGFVSGRMAKAFSDEEKAVILSELPQQRMIAPQEVAHVCAYLCHPNAKSITGTVQKVNGGWYI . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 36044 36748 . - 0 GCA_005502385.1_00994 GCA_005502385.1_00994_gene,GCA_005502385.1_00994_mRNA GCA_005502385.1_00994 3-oxoacyl-[acyl-carrier-protein] reductase FabG GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKALVFGGSGSIGSAIVDRLLKEGYEVVLQYYQSDISSLEKKYKGEAVEFIQMDLTHDIDLNDIFSHIKQLDCLIYSSGTSLYGMLQDMKDKEIDECYHIHVKQLIRCCRYFIDLLRKSTNGRIIVISSIWGETGASMETIYSAMKSAQIGFVKALSQELALTNVTVNAIAPGFVSGRMAKAFSDEEKAVILSELPQQRMIAPQEVAHVCAYLCHPNAKSITGTVQKVNGGWYI persistent 234 ymfI elongation factor P 5-aminopentanone reductase WP_017174621.1 UPI00030BAE69 UniRef100_A0A8X8GSG3,UniRef50_A0A380G8X7,UniRef90_A0AAE5JNF0 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 36751 38037 . - . GCA_005502385.1_00995_gene GCA_005502385.1_00995 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQEQYYELIDERVYKHELNNGLRLFVIPKKGFQKTYVTYTTQFGSLDNTFKPHHKDQYVTVPDGVAHFLEHKLFEKDDDEDLFTAFANDNAQVNAFTSFDRTSYLFSATDQVERNILRLLDMVETPYFSKETVDKEKGIIAEEIKMYQEQPGYKIMFNTLRAMYHHHPIKVDIAGSVESIYSITKDDLYLCYETFYHPSNMVLFVVGDVDPKRICNVIEEHENRRHKTNQPSIQRGAIKEPNEVVQSFVSEKMKLQSPRLMLGFKNEPLDEAPEKYVQRDLEMTLFFELVFGEETDFYQSLLNDDLIDDSFGYQFVLEPTYSFSIITSATHEPDQLKDRLLTELKKYRGNLKDSEAFELLKKQFIGEFISSLNSPEYIANQYAKLYFEGVSVFDMLDIVENITLDSINETAKQYLNIDRLVDSRLEID . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 36751 38037 . - . GCA_005502385.1_00995_mRNA GCA_005502385.1_00995 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQEQYYELIDERVYKHELNNGLRLFVIPKKGFQKTYVTYTTQFGSLDNTFKPHHKDQYVTVPDGVAHFLEHKLFEKDDDEDLFTAFANDNAQVNAFTSFDRTSYLFSATDQVERNILRLLDMVETPYFSKETVDKEKGIIAEEIKMYQEQPGYKIMFNTLRAMYHHHPIKVDIAGSVESIYSITKDDLYLCYETFYHPSNMVLFVVGDVDPKRICNVIEEHENRRHKTNQPSIQRGAIKEPNEVVQSFVSEKMKLQSPRLMLGFKNEPLDEAPEKYVQRDLEMTLFFELVFGEETDFYQSLLNDDLIDDSFGYQFVLEPTYSFSIITSATHEPDQLKDRLLTELKKYRGNLKDSEAFELLKKQFIGEFISSLNSPEYIANQYAKLYFEGVSVFDMLDIVENITLDSINETAKQYLNIDRLVDSRLEID . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 36751 38037 . - 0 GCA_005502385.1_00995 GCA_005502385.1_00995_gene,GCA_005502385.1_00995_mRNA GCA_005502385.1_00995 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQEQYYELIDERVYKHELNNGLRLFVIPKKGFQKTYVTYTTQFGSLDNTFKPHHKDQYVTVPDGVAHFLEHKLFEKDDDEDLFTAFANDNAQVNAFTSFDRTSYLFSATDQVERNILRLLDMVETPYFSKETVDKEKGIIAEEIKMYQEQPGYKIMFNTLRAMYHHHPIKVDIAGSVESIYSITKDDLYLCYETFYHPSNMVLFVVGDVDPKRICNVIEEHENRRHKTNQPSIQRGAIKEPNEVVQSFVSEKMKLQSPRLMLGFKNEPLDEAPEKYVQRDLEMTLFFELVFGEETDFYQSLLNDDLIDDSFGYQFVLEPTYSFSIITSATHEPDQLKDRLLTELKKYRGNLKDSEAFELLKKQFIGEFISSLNSPEYIANQYAKLYFEGVSVFDMLDIVENITLDSINETAKQYLNIDRLVDSRLEID persistent 428 yfmH EF-P 5-aminopentanol modification-associated protein YfmH WP_048679827.1 UPI00066085D5 UniRef100_UPI00066085D5,UniRef50_A0A7U7PY37,UniRef90_A0A3S7GT12 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 38037 39302 . - . GCA_005502385.1_00996_gene GCA_005502385.1_00996 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKQHTNHQIHIDILPTEKFKTTMITFKFIAPLDYETITARSLLSKVLVRATKKWPTDKSFNKQLSELYGAYINSFVSKFKDKHVITISLEIVNEHYLKDTTPLFEKGLNLLKEVIMNPLVENNSFNSTFVTQEKSLLHKKIEAMIDNKAQYSFINLLKYMFKNEAYRYLAIGQIENIARITNESLYDTYKSMINNDMCSVYVVGNVNEKEVTSLIENSFSLSSTTFDFNHNVNTDCTDQSTETIIEKDTVDQAKLNLGYRFPTHYGNEDYYALVVLNTMFGGDPSSVLFNEVREKQSLAYSIHSQLDGKNGYLFVLSGVSVEKYDIAKTTIIEEFEKFKVGDFSEEKLALAKKIIISQRQEIADRPKGIIEVMQNQLLLNQPQSDKEYMELINKVTKEDVVKMANQAYLDTIYVLTKGGQS . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 38037 39302 . - . GCA_005502385.1_00996_mRNA GCA_005502385.1_00996 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKQHTNHQIHIDILPTEKFKTTMITFKFIAPLDYETITARSLLSKVLVRATKKWPTDKSFNKQLSELYGAYINSFVSKFKDKHVITISLEIVNEHYLKDTTPLFEKGLNLLKEVIMNPLVENNSFNSTFVTQEKSLLHKKIEAMIDNKAQYSFINLLKYMFKNEAYRYLAIGQIENIARITNESLYDTYKSMINNDMCSVYVVGNVNEKEVTSLIENSFSLSSTTFDFNHNVNTDCTDQSTETIIEKDTVDQAKLNLGYRFPTHYGNEDYYALVVLNTMFGGDPSSVLFNEVREKQSLAYSIHSQLDGKNGYLFVLSGVSVEKYDIAKTTIIEEFEKFKVGDFSEEKLALAKKIIISQRQEIADRPKGIIEVMQNQLLLNQPQSDKEYMELINKVTKEDVVKMANQAYLDTIYVLTKGGQS . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 38037 39302 . - 0 GCA_005502385.1_00996 GCA_005502385.1_00996_gene,GCA_005502385.1_00996_mRNA GCA_005502385.1_00996 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKQHTNHQIHIDILPTEKFKTTMITFKFIAPLDYETITARSLLSKVLVRATKKWPTDKSFNKQLSELYGAYINSFVSKFKDKHVITISLEIVNEHYLKDTTPLFEKGLNLLKEVIMNPLVENNSFNSTFVTQEKSLLHKKIEAMIDNKAQYSFINLLKYMFKNEAYRYLAIGQIENIARITNESLYDTYKSMINNDMCSVYVVGNVNEKEVTSLIENSFSLSSTTFDFNHNVNTDCTDQSTETIIEKDTVDQAKLNLGYRFPTHYGNEDYYALVVLNTMFGGDPSSVLFNEVREKQSLAYSIHSQLDGKNGYLFVLSGVSVEKYDIAKTTIIEEFEKFKVGDFSEEKLALAKKIIISQRQEIADRPKGIIEVMQNQLLLNQPQSDKEYMELINKVTKEDVVKMANQAYLDTIYVLTKGGQS persistent 421 yfmF EF-P 5-aminopentanol modification-associated protein YfmF WP_137689511.1 UPI0010F879C0 UniRef100_UPI0010F879C0,UniRef50_Q2FZ16,UniRef90_A0A3S7GT14 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 39330 40046 . - . GCA_005502385.1_00997_gene GCA_005502385.1_00997 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTELNSVFKVKEYIFKKIKNHSLKPGDKLPSNLSIAREVNVKTDDVYEAIGELIIEQVLTDNFEEGTSIKALQPFYYPLNKLFSISEMIKKAGYEASTEYLSLEQQPASLLDAKMLDIKDKQPITIIERLRTANHHPVIYCLDKIAEHHLTCTEYQESDGSMLNAIELNTGHKVASAETEIEAISYEPHISSILNAEPHEGLMLLKVVHYDEMGKPILYSLNYIKSSLVKFKLTRTKI . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 39330 40046 . - . GCA_005502385.1_00997_mRNA GCA_005502385.1_00997 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTELNSVFKVKEYIFKKIKNHSLKPGDKLPSNLSIAREVNVKTDDVYEAIGELIIEQVLTDNFEEGTSIKALQPFYYPLNKLFSISEMIKKAGYEASTEYLSLEQQPASLLDAKMLDIKDKQPITIIERLRTANHHPVIYCLDKIAEHHLTCTEYQESDGSMLNAIELNTGHKVASAETEIEAISYEPHISSILNAEPHEGLMLLKVVHYDEMGKPILYSLNYIKSSLVKFKLTRTKI . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 39330 40046 . - 0 GCA_005502385.1_00997 GCA_005502385.1_00997_gene,GCA_005502385.1_00997_mRNA GCA_005502385.1_00997 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTELNSVFKVKEYIFKKIKNHSLKPGDKLPSNLSIAREVNVKTDDVYEAIGELIIEQVLTDNFEEGTSIKALQPFYYPLNKLFSISEMIKKAGYEASTEYLSLEQQPASLLDAKMLDIKDKQPITIIERLRTANHHPVIYCLDKIAEHHLTCTEYQESDGSMLNAIELNTGHKVASAETEIEAISYEPHISSILNAEPHEGLMLLKVVHYDEMGKPILYSLNYIKSSLVKFKLTRTKI persistent 238 gntR GntR family transcriptional regulator WP_017174618.1 UPI0002E5D9C0 UniRef100_A0A3S7GT08,UniRef50_Q2FZ17,UniRef90_A0A974QMC3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 40049 42472 . - . GCA_005502385.1_00998_gene GCA_005502385.1_00998 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPRTKKKTTTRKTNSKSKTKARQTKKKKQQKTDSSVRYIIAIVIVIISILGIFQLGLFGRMIDSFFNYLFGASRYLTYILVSLITIYIAMQRHFPKTRRTFGLILLQFVLLIVSQLIYYFSKGEVAKREPVLSYVYKSYEHTHFPNFGGGIIGFYLLKLFVPLISIAGIIIVTLILLISSFILLLKLHHRDVARNTIDYFKRSTQSASSTLKEKREANKIRREERLREKEEQRQALAHQRELEEQQRKDEVMKDVSDFPEVKQQHEDIPIYSHHAATDEEKVRSKRKKRQFDIDHQDKEPTHVSASNSMKKDKIKHVSNDDDTNNSSIIEAGEVGNVAYHIPPLSLLKQPTKQTTTSRAEVQRKGQILESTMKNFGVNAKVTQIKIGPAVTQYEVQPAQGVKVNKIVNLHNDIALALAAKDIRIEAPIPGRSAVGIEVPNDKISLVTLKEVLESKFPAKNKLEVGLGRDISGEPMTIELNETPHLLVAGSTGSGKSVCINGIITSILLNAKPHEVKLMLIDPKMVELNVYNGVPHLLIPVVTNPHKASQALEKIVAEMERRYDLFQHSSTRNIEGYNQFIRRQNEELDEKQSELPYIVVIVDELADLMMVAGKEVENAIQRITQMARAAGIHLIVATQRPSVDVITGIIKNNIPSRIAFAVSSQTDSRTIIGSGGAEKLLGKGDMLYVGNGESTQTRVQGAFLSDQEVQEVVNYVVEQQKANYVKEMEPDAPVEKSEMKSEDALYDDAYAFVIEKQKASTSLLQRQFRIGYNRASRLMDDLERNNVIGPQKGSKPRQVLIDFENEEV . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 40049 42472 . - . GCA_005502385.1_00998_mRNA GCA_005502385.1_00998 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPRTKKKTTTRKTNSKSKTKARQTKKKKQQKTDSSVRYIIAIVIVIISILGIFQLGLFGRMIDSFFNYLFGASRYLTYILVSLITIYIAMQRHFPKTRRTFGLILLQFVLLIVSQLIYYFSKGEVAKREPVLSYVYKSYEHTHFPNFGGGIIGFYLLKLFVPLISIAGIIIVTLILLISSFILLLKLHHRDVARNTIDYFKRSTQSASSTLKEKREANKIRREERLREKEEQRQALAHQRELEEQQRKDEVMKDVSDFPEVKQQHEDIPIYSHHAATDEEKVRSKRKKRQFDIDHQDKEPTHVSASNSMKKDKIKHVSNDDDTNNSSIIEAGEVGNVAYHIPPLSLLKQPTKQTTTSRAEVQRKGQILESTMKNFGVNAKVTQIKIGPAVTQYEVQPAQGVKVNKIVNLHNDIALALAAKDIRIEAPIPGRSAVGIEVPNDKISLVTLKEVLESKFPAKNKLEVGLGRDISGEPMTIELNETPHLLVAGSTGSGKSVCINGIITSILLNAKPHEVKLMLIDPKMVELNVYNGVPHLLIPVVTNPHKASQALEKIVAEMERRYDLFQHSSTRNIEGYNQFIRRQNEELDEKQSELPYIVVIVDELADLMMVAGKEVENAIQRITQMARAAGIHLIVATQRPSVDVITGIIKNNIPSRIAFAVSSQTDSRTIIGSGGAEKLLGKGDMLYVGNGESTQTRVQGAFLSDQEVQEVVNYVVEQQKANYVKEMEPDAPVEKSEMKSEDALYDDAYAFVIEKQKASTSLLQRQFRIGYNRASRLMDDLERNNVIGPQKGSKPRQVLIDFENEEV . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 40049 42472 . - 0 GCA_005502385.1_00998 GCA_005502385.1_00998_gene,GCA_005502385.1_00998_mRNA GCA_005502385.1_00998 DNA translocase FtsK GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPRTKKKTTTRKTNSKSKTKARQTKKKKQQKTDSSVRYIIAIVIVIISILGIFQLGLFGRMIDSFFNYLFGASRYLTYILVSLITIYIAMQRHFPKTRRTFGLILLQFVLLIVSQLIYYFSKGEVAKREPVLSYVYKSYEHTHFPNFGGGIIGFYLLKLFVPLISIAGIIIVTLILLISSFILLLKLHHRDVARNTIDYFKRSTQSASSTLKEKREANKIRREERLREKEEQRQALAHQRELEEQQRKDEVMKDVSDFPEVKQQHEDIPIYSHHAATDEEKVRSKRKKRQFDIDHQDKEPTHVSASNSMKKDKIKHVSNDDDTNNSSIIEAGEVGNVAYHIPPLSLLKQPTKQTTTSRAEVQRKGQILESTMKNFGVNAKVTQIKIGPAVTQYEVQPAQGVKVNKIVNLHNDIALALAAKDIRIEAPIPGRSAVGIEVPNDKISLVTLKEVLESKFPAKNKLEVGLGRDISGEPMTIELNETPHLLVAGSTGSGKSVCINGIITSILLNAKPHEVKLMLIDPKMVELNVYNGVPHLLIPVVTNPHKASQALEKIVAEMERRYDLFQHSSTRNIEGYNQFIRRQNEELDEKQSELPYIVVIVDELADLMMVAGKEVENAIQRITQMARAAGIHLIVATQRPSVDVITGIIKNNIPSRIAFAVSSQTDSRTIIGSGGAEKLLGKGDMLYVGNGESTQTRVQGAFLSDQEVQEVVNYVVEQQKANYVKEMEPDAPVEKSEMKSEDALYDDAYAFVIEKQKASTSLLQRQFRIGYNRASRLMDDLERNNVIGPQKGSKPRQVLIDFENEEV persistent 807 ftsK Cell division protein FtsK WP_037540994.1 UPI0004533A4B UniRef100_A0A3S7GT07,UniRef50_Q5HGF5,UniRef90_A0A3S7GT07 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 42809 44482 . - . GCA_005502385.1_00999_gene GCA_005502385.1_00999 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSLVKKKNDDIRIIPLGGVGEIAKNMYIVEVDDEMFMLDAGLMFPEDEMLGVDIVIPDIQYVVENKDKLKGIFLSHGHEHAIGAVSYILEQVDAPIYGSKLTLALVKESIKERNIKKKVRYYTVNHDSVMRFKNVNITFFNTSHSIPDSLGICIHTSHGSIVYTGEFKFDQSLQGHYAPDMKRMAEIGEEGVFALISDSTEAEKPGYNTPENVIESHIYDAFAKVKGRLIVSCYASNFIRIQQVLNVASKLNRKVSFLGKSLESSFNTARKMGYFDIPKDLLLPINEVENYPKNEVVIIATGMEGEPIEALSQMAQHKHKILNIEEGDSVYLAITASANMEVIIANTLNELVRAGAHIIPNNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLANEAGVAPEKIFLVEKGDVIHFDGSHMVLNEKVNSGNILIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNRRIAAGPEIQSRGFVYVRESEELMQEAEDKVREIVEAGLQEKRIEWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 42809 44482 . - . GCA_005502385.1_00999_mRNA GCA_005502385.1_00999 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSLVKKKNDDIRIIPLGGVGEIAKNMYIVEVDDEMFMLDAGLMFPEDEMLGVDIVIPDIQYVVENKDKLKGIFLSHGHEHAIGAVSYILEQVDAPIYGSKLTLALVKESIKERNIKKKVRYYTVNHDSVMRFKNVNITFFNTSHSIPDSLGICIHTSHGSIVYTGEFKFDQSLQGHYAPDMKRMAEIGEEGVFALISDSTEAEKPGYNTPENVIESHIYDAFAKVKGRLIVSCYASNFIRIQQVLNVASKLNRKVSFLGKSLESSFNTARKMGYFDIPKDLLLPINEVENYPKNEVVIIATGMEGEPIEALSQMAQHKHKILNIEEGDSVYLAITASANMEVIIANTLNELVRAGAHIIPNNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLANEAGVAPEKIFLVEKGDVIHFDGSHMVLNEKVNSGNILIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNRRIAAGPEIQSRGFVYVRESEELMQEAEDKVREIVEAGLQEKRIEWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 42809 44482 . - 0 GCA_005502385.1_00999 GCA_005502385.1_00999_gene,GCA_005502385.1_00999_mRNA GCA_005502385.1_00999 Ribonuclease J 2 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSLVKKKNDDIRIIPLGGVGEIAKNMYIVEVDDEMFMLDAGLMFPEDEMLGVDIVIPDIQYVVENKDKLKGIFLSHGHEHAIGAVSYILEQVDAPIYGSKLTLALVKESIKERNIKKKVRYYTVNHDSVMRFKNVNITFFNTSHSIPDSLGICIHTSHGSIVYTGEFKFDQSLQGHYAPDMKRMAEIGEEGVFALISDSTEAEKPGYNTPENVIESHIYDAFAKVKGRLIVSCYASNFIRIQQVLNVASKLNRKVSFLGKSLESSFNTARKMGYFDIPKDLLLPINEVENYPKNEVVIIATGMEGEPIEALSQMAQHKHKILNIEEGDSVYLAITASANMEVIIANTLNELVRAGAHIIPNNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLANEAGVAPEKIFLVEKGDVIHFDGSHMVLNEKVNSGNILIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNRRIAAGPEIQSRGFVYVRESEELMQEAEDKVREIVEAGLQEKRIEWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI persistent 557 rnj2 Ribonuclease J 2 3.1.-.- GO:0003723,GO:0004521,GO:0004534,GO:0005737,GO:0006364,GO:0008270 COG0595,J WP_017174616.1 UPI000308BD8F UniRef100_A0A8X8GND6,UniRef50_Q2FZ19,UniRef90_Q2FZ19 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 44688 46784 . - . GCA_005502385.1_01000_gene GCA_005502385.1_01000 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSQEKKVFKTEWAGRSLTIETGQLAKQANGAVLVRYGDTVVLSTAVASKEPRDGDFFPLTVNYEEKMYAAGKIPGGFKKREGRPGDEATLTARLIDRPIRPLFPKGYRHDVQIMNTVLSADPDCSPEMAAMIGSSMALSVSDIPFQGPIAGVNVGYIDGKYVINPTLEQKEVSRLDLEVAGHKDAVNMVEAGASEITEQEMLEAIFFGHEEIKRLVAFQEKVVEHIQPVKKEFIPVERDEELVQRVKSLTEEKGLKETVLTFDKQQRDENLDALKAEIATEFVDEADPENELLIDEVYAILNDLVKEEVRRLIADEKIRPDGRKPDEIRPLESEVGLLPRAHGSGLFTRGQTQALSVLTLGALGDYQLIDGLGPEIEKRFMHHYNFPNFSVGETGPVRAPGRREIGHGALGERALRYIIPDTTEFPYTIRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTREDSYTILTDIQGMEDALGDMDFKVAGTKEGITAIQMDIKIDGLTREVIEEALEQARQGRLAIMDHMLQTIDQPRSELSAYAPKVEIMHIKPEKIRDVIGPGGKKINEIIDETGVKLDIEQDGTIFIGAVDQEMINRAREIINEITREAEVGQVYHAKVKRIEKYGAFVELFPGKDALLHISQISKDRINKVEDVLKIGDTIEVKITEIDKQGRVNASHKVLDE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 44688 46784 . - . GCA_005502385.1_01000_mRNA GCA_005502385.1_01000 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSQEKKVFKTEWAGRSLTIETGQLAKQANGAVLVRYGDTVVLSTAVASKEPRDGDFFPLTVNYEEKMYAAGKIPGGFKKREGRPGDEATLTARLIDRPIRPLFPKGYRHDVQIMNTVLSADPDCSPEMAAMIGSSMALSVSDIPFQGPIAGVNVGYIDGKYVINPTLEQKEVSRLDLEVAGHKDAVNMVEAGASEITEQEMLEAIFFGHEEIKRLVAFQEKVVEHIQPVKKEFIPVERDEELVQRVKSLTEEKGLKETVLTFDKQQRDENLDALKAEIATEFVDEADPENELLIDEVYAILNDLVKEEVRRLIADEKIRPDGRKPDEIRPLESEVGLLPRAHGSGLFTRGQTQALSVLTLGALGDYQLIDGLGPEIEKRFMHHYNFPNFSVGETGPVRAPGRREIGHGALGERALRYIIPDTTEFPYTIRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTREDSYTILTDIQGMEDALGDMDFKVAGTKEGITAIQMDIKIDGLTREVIEEALEQARQGRLAIMDHMLQTIDQPRSELSAYAPKVEIMHIKPEKIRDVIGPGGKKINEIIDETGVKLDIEQDGTIFIGAVDQEMINRAREIINEITREAEVGQVYHAKVKRIEKYGAFVELFPGKDALLHISQISKDRINKVEDVLKIGDTIEVKITEIDKQGRVNASHKVLDE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 44688 46784 . - 0 GCA_005502385.1_01000 GCA_005502385.1_01000_gene,GCA_005502385.1_01000_mRNA GCA_005502385.1_01000 Polyribonucleotide nucleotidyltransferase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSQEKKVFKTEWAGRSLTIETGQLAKQANGAVLVRYGDTVVLSTAVASKEPRDGDFFPLTVNYEEKMYAAGKIPGGFKKREGRPGDEATLTARLIDRPIRPLFPKGYRHDVQIMNTVLSADPDCSPEMAAMIGSSMALSVSDIPFQGPIAGVNVGYIDGKYVINPTLEQKEVSRLDLEVAGHKDAVNMVEAGASEITEQEMLEAIFFGHEEIKRLVAFQEKVVEHIQPVKKEFIPVERDEELVQRVKSLTEEKGLKETVLTFDKQQRDENLDALKAEIATEFVDEADPENELLIDEVYAILNDLVKEEVRRLIADEKIRPDGRKPDEIRPLESEVGLLPRAHGSGLFTRGQTQALSVLTLGALGDYQLIDGLGPEIEKRFMHHYNFPNFSVGETGPVRAPGRREIGHGALGERALRYIIPDTTEFPYTIRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTREDSYTILTDIQGMEDALGDMDFKVAGTKEGITAIQMDIKIDGLTREVIEEALEQARQGRLAIMDHMLQTIDQPRSELSAYAPKVEIMHIKPEKIRDVIGPGGKKINEIIDETGVKLDIEQDGTIFIGAVDQEMINRAREIINEITREAEVGQVYHAKVKRIEKYGAFVELFPGKDALLHISQISKDRINKVEDVLKIGDTIEVKITEIDKQGRVNASHKVLDE persistent 698 pnp polyribonucleotide nucleotidyltransferase 2.7.7.8 GO:0000175,GO:0000287,GO:0003723,GO:0004654,GO:0005829,GO:0006396,GO:0006402 COG1185,J WP_061815411.1 UPI00077C6491 UniRef100_UPI00077C6491,UniRef50_Q2FZ20,UniRef90_Q2FZ20 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 46629 46815 . + . GCA_005502385.1_01001_gene GCA_005502385.1_01001 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 46629 46815 . + . GCA_005502385.1_01001_mRNA GCA_005502385.1_01001 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 . . . . . . . GCA_005502385.1|SCOV01000002.1 Infernal:001001 misc_RNA 46629 46815 60.4 + . GCA_005502385.1_01001 GCA_005502385.1_01001_gene,GCA_005502385.1_01001_mRNA GCA_005502385.1_01001 rliD GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 46921 47190 . - . GCA_005502385.1_01002_gene GCA_005502385.1_01002 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAITQERKNEIIKEYRVHETDTGSPEVQIAVLTAEISALNEHLREHKKDHHSRRGLLKMVGRRRHLLNYLRSKDIQRYRELIKSLGIRR . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 46921 47190 . - . GCA_005502385.1_01002_mRNA GCA_005502385.1_01002 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAITQERKNEIIKEYRVHETDTGSPEVQIAVLTAEISALNEHLREHKKDHHSRRGLLKMVGRRRHLLNYLRSKDIQRYRELIKSLGIRR . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 46921 47190 . - 0 GCA_005502385.1_01002 GCA_005502385.1_01002_gene,GCA_005502385.1_01002_mRNA GCA_005502385.1_01002 30S ribosomal protein S15 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAITQERKNEIIKEYRVHETDTGSPEVQIAVLTAEISALNEHLREHKKDHHSRRGLLKMVGRRRHLLNYLRSKDIQRYRELIKSLGIRR persistent 89 rpsO 30S ribosomal protein S15 GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022627 COG0184,J WP_017174614.1 UPI00031E3D3F UniRef100_A0A1L8Y9T1,UniRef50_Q2G2Q1,UniRef90_Q2G2Q1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 47301 48272 . - . GCA_005502385.1_01003_gene GCA_005502385.1_01003 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKVIEITHPIQNEQLIKEDVAMAFGFFDGMHRGHSKVFEALDIRAKEKNLKKAVTTFDPHPSVVLNPERKRTDYLTPLSDKLEMIEQHDIDYCIVINFSSRFANVTAEEFIKDYIINNHVKEVVAGFDFTFGKFGKGNMAVLNEIDEFNTTIVGKLDLDSEKISTTSIRQALHEGNLQKANDELGYLYRIKGTVVQGEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSIEIGAEHKIYRGVANVGVKPTFHDPSKAEVVIEVNIFDFEENIYGERVIVYWHHYLRPEVKFDGIDALVSQMNDDKERAKYLLAVDFGDDVSYNI . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 47301 48272 . - . GCA_005502385.1_01003_mRNA GCA_005502385.1_01003 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKVIEITHPIQNEQLIKEDVAMAFGFFDGMHRGHSKVFEALDIRAKEKNLKKAVTTFDPHPSVVLNPERKRTDYLTPLSDKLEMIEQHDIDYCIVINFSSRFANVTAEEFIKDYIINNHVKEVVAGFDFTFGKFGKGNMAVLNEIDEFNTTIVGKLDLDSEKISTTSIRQALHEGNLQKANDELGYLYRIKGTVVQGEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSIEIGAEHKIYRGVANVGVKPTFHDPSKAEVVIEVNIFDFEENIYGERVIVYWHHYLRPEVKFDGIDALVSQMNDDKERAKYLLAVDFGDDVSYNI . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 47301 48272 . - 0 GCA_005502385.1_01003 GCA_005502385.1_01003_gene,GCA_005502385.1_01003_mRNA GCA_005502385.1_01003 Bifunctional riboflavin kinase/FMN adenylyltransferase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKVIEITHPIQNEQLIKEDVAMAFGFFDGMHRGHSKVFEALDIRAKEKNLKKAVTTFDPHPSVVLNPERKRTDYLTPLSDKLEMIEQHDIDYCIVINFSSRFANVTAEEFIKDYIINNHVKEVVAGFDFTFGKFGKGNMAVLNEIDEFNTTIVGKLDLDSEKISTTSIRQALHEGNLQKANDELGYLYRIKGTVVQGEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSIEIGAEHKIYRGVANVGVKPTFHDPSKAEVVIEVNIFDFEENIYGERVIVYWHHYLRPEVKFDGIDALVSQMNDDKERAKYLLAVDFGDDVSYNI persistent 323 ribF riboflavin biosynthesis protein RibF 2.7.1.26,2.7.7.2 GO:0003919,GO:0005737,GO:0006747,GO:0009398 WP_002448787.1 UPI00019FC700 UniRef100_A0A4Q9WVF4,UniRef50_Q2G2Q2,UniRef90_A0A4Q9WVF4 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 48290 49207 . - . GCA_005502385.1_01004_gene GCA_005502385.1_01004 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MYNGILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVSGVLPICIGTATRVSDYVMDMGKSYQATITLGESTTTEDQTGEVIEKVNISSNTITSIEVDRVLEEFKGVIEQIPPMYSSVKVNGKKLYEYARKGETIERPKRQVKIDEIERISDLTFIEQTCHFDIKVTCGKGTYIRTLATDIGKALGYPAHMSLLTRINSGGFNINESLSLEKISELHEHETLQHYLFPIEYGLKSLQHVVIDDDTLKYRILNGQKLLKKDFTLSLEKQFVFIDKISEKALAIYEHHPDKINEIKPKKVFN . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 48290 49207 . - . GCA_005502385.1_01004_mRNA GCA_005502385.1_01004 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MYNGILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVSGVLPICIGTATRVSDYVMDMGKSYQATITLGESTTTEDQTGEVIEKVNISSNTITSIEVDRVLEEFKGVIEQIPPMYSSVKVNGKKLYEYARKGETIERPKRQVKIDEIERISDLTFIEQTCHFDIKVTCGKGTYIRTLATDIGKALGYPAHMSLLTRINSGGFNINESLSLEKISELHEHETLQHYLFPIEYGLKSLQHVVIDDDTLKYRILNGQKLLKKDFTLSLEKQFVFIDKISEKALAIYEHHPDKINEIKPKKVFN . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 48290 49207 . - 0 GCA_005502385.1_01004 GCA_005502385.1_01004_gene,GCA_005502385.1_01004_mRNA GCA_005502385.1_01004 tRNA pseudouridine synthase B GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MYNGILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVSGVLPICIGTATRVSDYVMDMGKSYQATITLGESTTTEDQTGEVIEKVNISSNTITSIEVDRVLEEFKGVIEQIPPMYSSVKVNGKKLYEYARKGETIERPKRQVKIDEIERISDLTFIEQTCHFDIKVTCGKGTYIRTLATDIGKALGYPAHMSLLTRINSGGFNINESLSLEKISELHEHETLQHYLFPIEYGLKSLQHVVIDDDTLKYRILNGQKLLKKDFTLSLEKQFVFIDKISEKALAIYEHHPDKINEIKPKKVFN persistent 305 truB tRNA pseudouridine(55) synthase TruB 5.4.99.25 GO:0001522,GO:0003723,GO:0009451,GO:0009982 WP_017174613.1 UPI0002E28184 UniRef100_A0A3S7GWI7,UniRef50_Q2G2Q3,UniRef90_A0A974KXY6 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 49419 49769 . - . GCA_005502385.1_01005_gene GCA_005502385.1_01005 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSNMRAERVGEQMKKEVMDIINNKVKDPRVGFITITDVELTNDLSQAKVFLTVLGNKKEVNDTFKALDKAKGFIKSELGSRMRLRIVPELFFEYDESIEYGNKIEKMIQDLHKQDK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 49419 49769 . - . GCA_005502385.1_01005_mRNA GCA_005502385.1_01005 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSNMRAERVGEQMKKEVMDIINNKVKDPRVGFITITDVELTNDLSQAKVFLTVLGNKKEVNDTFKALDKAKGFIKSELGSRMRLRIVPELFFEYDESIEYGNKIEKMIQDLHKQDK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 49419 49769 . - 0 GCA_005502385.1_01005 GCA_005502385.1_01005_gene,GCA_005502385.1_01005_mRNA GCA_005502385.1_01005 Ribosome-binding factor A GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSNMRAERVGEQMKKEVMDIINNKVKDPRVGFITITDVELTNDLSQAKVFLTVLGNKKEVNDTFKALDKAKGFIKSELGSRMRLRIVPELFFEYDESIEYGNKIEKMIQDLHKQDK persistent 116 rbfA 30S ribosome-binding factor RbfA GO:0006364 WP_002448740.1 UPI00019FC702 UniRef100_A0A1L8Y9R4,UniRef50_P32731,UniRef90_G5JJA3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 49864 51960 . - . GCA_005502385.1_01006_gene GCA_005502385.1_01006 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKKRIYEYAKELNVKSKEIIDELKKMDVEVSNHMQALEDDQIKMLDKKFKSSQNEENKKQNTQNNHQKQQSKKDNNQNKSNSKKKNNKNSKNNKNNKNNNKGKNNKSAAEPKEMPSKITYEEGITVGELADKLNIESSGIIKKLFLLGIVANINQSLDEETLELIADDYGVEIEKEVVVNEEDLTTYFDDEEDDPDAIERPAVVTIMGHVDHGKTTLLDSIRNTKVTAGEAGGITQHIGAYQIENNGKKITFLDTPGHAAFTTMRARGAQVTDITILVVAADDGVMPQTIEAINHAKEADVPTIVAVNKVDKPTANPDRVMQELTEYGLIPEDWGGDTIFVPLSALNGDGIDDLLEMIGLVAEVQELKANPDKQAVGTVIEAELDKSRGPAASLLVQNGTLHVGDSIVVGNTYGRVRAMVNDLGQRIKTAGPSTPVEITGINDVPQAGDRFVIFKDEKQARRIGEARHEASVIQQRQESKNVSLDNLFEQMKQGEMKDLNVIIKGDVQGSVEALAASLMKIDVEGVNVRIIHTAVGAINESDVTLANASNGIIVGFNVRPDAGAKRAAEAENVDMRLHRVIYNVIEEIESAMKGLLDPEFEEQVIGQAEVRQTFKVSKVGTIAGSYVTEGKITRNAGVRVIRDGIVQFEGELDTLKRFKDDAKEVSQGYECGITIANFNDIKEGDIIEAFEMVEIER . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 49864 51960 . - . GCA_005502385.1_01006_mRNA GCA_005502385.1_01006 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKKRIYEYAKELNVKSKEIIDELKKMDVEVSNHMQALEDDQIKMLDKKFKSSQNEENKKQNTQNNHQKQQSKKDNNQNKSNSKKKNNKNSKNNKNNKNNNKGKNNKSAAEPKEMPSKITYEEGITVGELADKLNIESSGIIKKLFLLGIVANINQSLDEETLELIADDYGVEIEKEVVVNEEDLTTYFDDEEDDPDAIERPAVVTIMGHVDHGKTTLLDSIRNTKVTAGEAGGITQHIGAYQIENNGKKITFLDTPGHAAFTTMRARGAQVTDITILVVAADDGVMPQTIEAINHAKEADVPTIVAVNKVDKPTANPDRVMQELTEYGLIPEDWGGDTIFVPLSALNGDGIDDLLEMIGLVAEVQELKANPDKQAVGTVIEAELDKSRGPAASLLVQNGTLHVGDSIVVGNTYGRVRAMVNDLGQRIKTAGPSTPVEITGINDVPQAGDRFVIFKDEKQARRIGEARHEASVIQQRQESKNVSLDNLFEQMKQGEMKDLNVIIKGDVQGSVEALAASLMKIDVEGVNVRIIHTAVGAINESDVTLANASNGIIVGFNVRPDAGAKRAAEAENVDMRLHRVIYNVIEEIESAMKGLLDPEFEEQVIGQAEVRQTFKVSKVGTIAGSYVTEGKITRNAGVRVIRDGIVQFEGELDTLKRFKDDAKEVSQGYECGITIANFNDIKEGDIIEAFEMVEIER . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 49864 51960 . - 0 GCA_005502385.1_01006 GCA_005502385.1_01006_gene,GCA_005502385.1_01006_mRNA GCA_005502385.1_01006 Translation initiation factor IF-2 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKKRIYEYAKELNVKSKEIIDELKKMDVEVSNHMQALEDDQIKMLDKKFKSSQNEENKKQNTQNNHQKQQSKKDNNQNKSNSKKKNNKNSKNNKNNKNNNKGKNNKSAAEPKEMPSKITYEEGITVGELADKLNIESSGIIKKLFLLGIVANINQSLDEETLELIADDYGVEIEKEVVVNEEDLTTYFDDEEDDPDAIERPAVVTIMGHVDHGKTTLLDSIRNTKVTAGEAGGITQHIGAYQIENNGKKITFLDTPGHAAFTTMRARGAQVTDITILVVAADDGVMPQTIEAINHAKEADVPTIVAVNKVDKPTANPDRVMQELTEYGLIPEDWGGDTIFVPLSALNGDGIDDLLEMIGLVAEVQELKANPDKQAVGTVIEAELDKSRGPAASLLVQNGTLHVGDSIVVGNTYGRVRAMVNDLGQRIKTAGPSTPVEITGINDVPQAGDRFVIFKDEKQARRIGEARHEASVIQQRQESKNVSLDNLFEQMKQGEMKDLNVIIKGDVQGSVEALAASLMKIDVEGVNVRIIHTAVGAINESDVTLANASNGIIVGFNVRPDAGAKRAAEAENVDMRLHRVIYNVIEEIESAMKGLLDPEFEEQVIGQAEVRQTFKVSKVGTIAGSYVTEGKITRNAGVRVIRDGIVQFEGELDTLKRFKDDAKEVSQGYECGITIANFNDIKEGDIIEAFEMVEIER persistent 698 infB translation initiation factor IF-2 GO:0003743,GO:0003924,GO:0005525,GO:0005737,GO:0005829,GO:0006413 COG0532,J WP_049382489.1 UPI00066C042F UniRef100_UPI00066C042F,UniRef50_P17889,UniRef90_Q4L5X1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 51965 52282 . - . GCA_005502385.1_01007_gene GCA_005502385.1_01007 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MIKEQIFNFLGLAMRARKVKVGESVLISEIKKRNIKLVILSTDASDNAKKNIKNKCDTYHVPFRVFGTRVELGQSLGKEERVNVGVTDSGFAKKLMSMIDEYCKE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 51965 52282 . - . GCA_005502385.1_01007_mRNA GCA_005502385.1_01007 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MIKEQIFNFLGLAMRARKVKVGESVLISEIKKRNIKLVILSTDASDNAKKNIKNKCDTYHVPFRVFGTRVELGQSLGKEERVNVGVTDSGFAKKLMSMIDEYCKE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 51965 52282 . - 0 GCA_005502385.1_01007 GCA_005502385.1_01007_gene,GCA_005502385.1_01007_mRNA GCA_005502385.1_01007 putative ribosomal protein YlxQ GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MIKEQIFNFLGLAMRARKVKVGESVLISEIKKRNIKLVILSTDASDNAKKNIKNKCDTYHVPFRVFGTRVELGQSLGKEERVNVGVTDSGFAKKLMSMIDEYCKE persistent 105 Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein WP_017174611.1 UPI00030ACAA6 UniRef100_A0A4Q9WSG5,UniRef50_A0A974KY52,UniRef90_A0A974KY52 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 52279 52563 . - . GCA_005502385.1_01008_gene GCA_005502385.1_01008 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKKKIPMRKCIITNEMRPKKDMIRVVINKEGEIFADGTGKQQGRGAYVSKDVKSVEDAQKNGVLEKYFNESPEKLDPVYKEVIRLIYREEIPK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 52279 52563 . - . GCA_005502385.1_01008_mRNA GCA_005502385.1_01008 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKKKIPMRKCIITNEMRPKKDMIRVVINKEGEIFADGTGKQQGRGAYVSKDVKSVEDAQKNGVLEKYFNESPEKLDPVYKEVIRLIYREEIPK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 52279 52563 . - 0 GCA_005502385.1_01008 GCA_005502385.1_01008_gene,GCA_005502385.1_01008_mRNA GCA_005502385.1_01008 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKKKIPMRKCIITNEMRPKKDMIRVVINKEGEIFADGTGKQQGRGAYVSKDVKSVEDAQKNGVLEKYFNESPEKLDPVYKEVIRLIYREEIPK persistent 94 rnpM RNase P modulator RnpM WP_002448835.1 UPI00019FC7AF UniRef100_A0A1L8Y9U3,UniRef50_A0A920C274,UniRef90_A0A1L8Y9U3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 52593 53819 . - . GCA_005502385.1_01009_gene GCA_005502385.1_01009 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MASNELLLATEYLEKEKKIPREVLIDAIEAALITAYKKNYDSARNVRVELNMDEGTFKVIARKEVVEEVFDDREEVDLSTALVKNPAYEIGDIYEEDVTPKDFGRVGAQAAKQAVMQRLRDAEREILYSEFIDKEEDILTGVIDRVDHRYVYVNLGRIEAVLSEAERSPNETYIPNERIKVYVNKVEQTTKGPQIYVSRSHPGLLKRLFEQEVPEIYDGTVIVKSVAREAGDRSKISVYSENPDIDAVGACVGAKGSRVEAVVEELGGEKIDIVQWDEDPNVFVRNALSPSQVLEVIVDEDNQSTVVVVPDYQLSLAIGKRGQNARLAAKLTGWKIDIKSETDAREAGIYPVIESEEKADEIVFSEDKDIEIDDINLEETNLTTAELSAEVDETSNEAQDASDNKEEH . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 52593 53819 . - . GCA_005502385.1_01009_mRNA GCA_005502385.1_01009 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MASNELLLATEYLEKEKKIPREVLIDAIEAALITAYKKNYDSARNVRVELNMDEGTFKVIARKEVVEEVFDDREEVDLSTALVKNPAYEIGDIYEEDVTPKDFGRVGAQAAKQAVMQRLRDAEREILYSEFIDKEEDILTGVIDRVDHRYVYVNLGRIEAVLSEAERSPNETYIPNERIKVYVNKVEQTTKGPQIYVSRSHPGLLKRLFEQEVPEIYDGTVIVKSVAREAGDRSKISVYSENPDIDAVGACVGAKGSRVEAVVEELGGEKIDIVQWDEDPNVFVRNALSPSQVLEVIVDEDNQSTVVVVPDYQLSLAIGKRGQNARLAAKLTGWKIDIKSETDAREAGIYPVIESEEKADEIVFSEDKDIEIDDINLEETNLTTAELSAEVDETSNEAQDASDNKEEH . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 52593 53819 . - 0 GCA_005502385.1_01009 GCA_005502385.1_01009_gene,GCA_005502385.1_01009_mRNA GCA_005502385.1_01009 Transcription termination/antitermination protein NusA GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MASNELLLATEYLEKEKKIPREVLIDAIEAALITAYKKNYDSARNVRVELNMDEGTFKVIARKEVVEEVFDDREEVDLSTALVKNPAYEIGDIYEEDVTPKDFGRVGAQAAKQAVMQRLRDAEREILYSEFIDKEEDILTGVIDRVDHRYVYVNLGRIEAVLSEAERSPNETYIPNERIKVYVNKVEQTTKGPQIYVSRSHPGLLKRLFEQEVPEIYDGTVIVKSVAREAGDRSKISVYSENPDIDAVGACVGAKGSRVEAVVEELGGEKIDIVQWDEDPNVFVRNALSPSQVLEVIVDEDNQSTVVVVPDYQLSLAIGKRGQNARLAAKLTGWKIDIKSETDAREAGIYPVIESEEKADEIVFSEDKDIEIDDINLEETNLTTAELSAEVDETSNEAQDASDNKEEH persistent 408 nusA Transcription termination/antitermination protein NusA COG0195,K WP_019835114.1 UPI000362C98D UniRef100_A0A4Q9WSI8,UniRef50_A0A380G0S3,UniRef90_A0A380G0S3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 53840 54307 . - . GCA_005502385.1_01010_gene GCA_005502385.1_01010 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKITEEVETIITPILDDLNFELVDVEYAKEGKDRFLRISIDKEGGVDLNDCTLASEKISEAMDQNDPIPEMYYLDVASPGAERPLKKEKDYQNAIEQPIFVSLYAPIEGDKEWLGILKSVDDDTITMEVKEKAKKKTIEIPRNKIAKARHAVMI . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 53840 54307 . - . GCA_005502385.1_01010_mRNA GCA_005502385.1_01010 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKITEEVETIITPILDDLNFELVDVEYAKEGKDRFLRISIDKEGGVDLNDCTLASEKISEAMDQNDPIPEMYYLDVASPGAERPLKKEKDYQNAIEQPIFVSLYAPIEGDKEWLGILKSVDDDTITMEVKEKAKKKTIEIPRNKIAKARHAVMI . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 53840 54307 . - 0 GCA_005502385.1_01010 GCA_005502385.1_01010_gene,GCA_005502385.1_01010_mRNA GCA_005502385.1_01010 Ribosome maturation factor RimP GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKITEEVETIITPILDDLNFELVDVEYAKEGKDRFLRISIDKEGGVDLNDCTLASEKISEAMDQNDPIPEMYYLDVASPGAERPLKKEKDYQNAIEQPIFVSLYAPIEGDKEWLGILKSVDDDTITMEVKEKAKKKTIEIPRNKIAKARHAVMI persistent 155 rimP ribosome maturation factor RimP GO:0000028,GO:0005829,GO:0006412,GO:0042274 COG0779,J WP_017174609.1 UPI0002F63E5A UniRef100_A0A4Q9WTK7,UniRef50_P32726,UniRef90_Q4L5W7 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 54453 58769 . - . GCA_005502385.1_01011_gene GCA_005502385.1_01011 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAMTSQEKFRVLADQIKISNQLDKEILEKGELTRIDVSNKNRSWEFQITLPYFLSNEDYLIFTHAIKEEFKDIAHVDWHFTIQNTSNQDEHVIKYFGHCIEHTALSPKVKGQLKQKRLIMSGNVLKVMTSNDIERNHFDKVCNGSLVKAFQKCGFDIDKVIFETDDSNRDEDLASLEAHIQEEDQQSAKEATEKIEKIKAEKAKQQDNNGSSVEKCQIGKPIHVENIKPIETIIEEEFKVAIEGVIFDINIKELKSGRHIVELKVTDYTDSLVLKMFTRKNKDDLNHFKALSVGKWVRAQGRIEEDTFVRDLVMMMSDIEEIKKTPKQDKAEEKRVEFHLHSSMSQMDGIPNISAYVNQAAAWGHKAIAVTDHNVVQAFPDAHSAAEKNGIKMIYGMEGMLVDDGVPIAYKPTDRDLKEATYVVFDVETTGLSNQYDQIIELAAVKVKDGEIIDKFERFSNPHEKLSETIINLTHITDDMLVDAPEIEEVLTEFKEWVGDAIFVAHNASFDMGFIDTGYERLGFGPSTNGVIDTLELSRTINTEYGKHGLNFLAKKYGVELTQHHRAIYDTEATAYIFIKMVQQMKELGVTNHKDINKKLSNEDAYKRARPTHVTLIVQNQDGLKNLFKIVSASLVKYYYRTPRIPRSLLNEYREGILVGTACDEGELFTAVMQRDQSEVEKIAKYYDFIEVQPPKLYQDLIDRELIRDTETLYEIYDRILKAGESTGIPVIATGNAHYLFEHDAIARKILIASQPGNPLNRSTLPEAHFRTTDEMLDEFHFLGEDKAYDIVVKNTNELADRIEKVIPIKDQLFTPRMEGANEEIRELSYTNAKKLYGDDLPQIVIDRLEKELDSIIGNGFSVIYLISQRLVKKSLDDGYLVGSRGSVGSSFVATMTEITEVNPLPPHYICPHCKTSEFFDDGSVGSGFDLPDKTCETCGGELIKEGQDIPFETFLGFKGDKVPDIDLNFSGEYQPHAHNYTKVLFGEDKVFRAGTIGTVAEKTAFGFVKGYLNDQGIHKRGAEIDRLVKGCTGVKRTTGQHPGGIIVVPDYMDIYDFTPIQYPADDQSASWMTTHFDFHSIHDNVLKLDILGHDDPTMIRMLQDLSGIDPKTIPVDDKETMQIFSSPASLGVTEEDILCKTGTFGVPEFGTGFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIRSGICDLSSVIGCRDDIMVYLMYAGLEPSMAFKTMESVRKGKGLTDEMIDAMKANDVPDWYLDSCLKIKYMFPKAHAAAYVLMAVRIAYFKVHHPLYYYAAYFTIRASDFDLITMIKDKESIKNTVKDMYSRYMDLGKKEKDVLTVLEIMNEMAHRGFKMQPISLEKSQAFDFIIEDDTLIPPFIAVPGLGENVAKRIVEAREDGPFLSKEDLNKKAGLSQKIIEYLDDLGSLPDLPDKAQLSIFDM . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 54453 58769 . - . GCA_005502385.1_01011_mRNA GCA_005502385.1_01011 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAMTSQEKFRVLADQIKISNQLDKEILEKGELTRIDVSNKNRSWEFQITLPYFLSNEDYLIFTHAIKEEFKDIAHVDWHFTIQNTSNQDEHVIKYFGHCIEHTALSPKVKGQLKQKRLIMSGNVLKVMTSNDIERNHFDKVCNGSLVKAFQKCGFDIDKVIFETDDSNRDEDLASLEAHIQEEDQQSAKEATEKIEKIKAEKAKQQDNNGSSVEKCQIGKPIHVENIKPIETIIEEEFKVAIEGVIFDINIKELKSGRHIVELKVTDYTDSLVLKMFTRKNKDDLNHFKALSVGKWVRAQGRIEEDTFVRDLVMMMSDIEEIKKTPKQDKAEEKRVEFHLHSSMSQMDGIPNISAYVNQAAAWGHKAIAVTDHNVVQAFPDAHSAAEKNGIKMIYGMEGMLVDDGVPIAYKPTDRDLKEATYVVFDVETTGLSNQYDQIIELAAVKVKDGEIIDKFERFSNPHEKLSETIINLTHITDDMLVDAPEIEEVLTEFKEWVGDAIFVAHNASFDMGFIDTGYERLGFGPSTNGVIDTLELSRTINTEYGKHGLNFLAKKYGVELTQHHRAIYDTEATAYIFIKMVQQMKELGVTNHKDINKKLSNEDAYKRARPTHVTLIVQNQDGLKNLFKIVSASLVKYYYRTPRIPRSLLNEYREGILVGTACDEGELFTAVMQRDQSEVEKIAKYYDFIEVQPPKLYQDLIDRELIRDTETLYEIYDRILKAGESTGIPVIATGNAHYLFEHDAIARKILIASQPGNPLNRSTLPEAHFRTTDEMLDEFHFLGEDKAYDIVVKNTNELADRIEKVIPIKDQLFTPRMEGANEEIRELSYTNAKKLYGDDLPQIVIDRLEKELDSIIGNGFSVIYLISQRLVKKSLDDGYLVGSRGSVGSSFVATMTEITEVNPLPPHYICPHCKTSEFFDDGSVGSGFDLPDKTCETCGGELIKEGQDIPFETFLGFKGDKVPDIDLNFSGEYQPHAHNYTKVLFGEDKVFRAGTIGTVAEKTAFGFVKGYLNDQGIHKRGAEIDRLVKGCTGVKRTTGQHPGGIIVVPDYMDIYDFTPIQYPADDQSASWMTTHFDFHSIHDNVLKLDILGHDDPTMIRMLQDLSGIDPKTIPVDDKETMQIFSSPASLGVTEEDILCKTGTFGVPEFGTGFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIRSGICDLSSVIGCRDDIMVYLMYAGLEPSMAFKTMESVRKGKGLTDEMIDAMKANDVPDWYLDSCLKIKYMFPKAHAAAYVLMAVRIAYFKVHHPLYYYAAYFTIRASDFDLITMIKDKESIKNTVKDMYSRYMDLGKKEKDVLTVLEIMNEMAHRGFKMQPISLEKSQAFDFIIEDDTLIPPFIAVPGLGENVAKRIVEAREDGPFLSKEDLNKKAGLSQKIIEYLDDLGSLPDLPDKAQLSIFDM . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 54453 58769 . - 0 GCA_005502385.1_01011 GCA_005502385.1_01011_gene,GCA_005502385.1_01011_mRNA GCA_005502385.1_01011 DNA polymerase III PolC-type GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAMTSQEKFRVLADQIKISNQLDKEILEKGELTRIDVSNKNRSWEFQITLPYFLSNEDYLIFTHAIKEEFKDIAHVDWHFTIQNTSNQDEHVIKYFGHCIEHTALSPKVKGQLKQKRLIMSGNVLKVMTSNDIERNHFDKVCNGSLVKAFQKCGFDIDKVIFETDDSNRDEDLASLEAHIQEEDQQSAKEATEKIEKIKAEKAKQQDNNGSSVEKCQIGKPIHVENIKPIETIIEEEFKVAIEGVIFDINIKELKSGRHIVELKVTDYTDSLVLKMFTRKNKDDLNHFKALSVGKWVRAQGRIEEDTFVRDLVMMMSDIEEIKKTPKQDKAEEKRVEFHLHSSMSQMDGIPNISAYVNQAAAWGHKAIAVTDHNVVQAFPDAHSAAEKNGIKMIYGMEGMLVDDGVPIAYKPTDRDLKEATYVVFDVETTGLSNQYDQIIELAAVKVKDGEIIDKFERFSNPHEKLSETIINLTHITDDMLVDAPEIEEVLTEFKEWVGDAIFVAHNASFDMGFIDTGYERLGFGPSTNGVIDTLELSRTINTEYGKHGLNFLAKKYGVELTQHHRAIYDTEATAYIFIKMVQQMKELGVTNHKDINKKLSNEDAYKRARPTHVTLIVQNQDGLKNLFKIVSASLVKYYYRTPRIPRSLLNEYREGILVGTACDEGELFTAVMQRDQSEVEKIAKYYDFIEVQPPKLYQDLIDRELIRDTETLYEIYDRILKAGESTGIPVIATGNAHYLFEHDAIARKILIASQPGNPLNRSTLPEAHFRTTDEMLDEFHFLGEDKAYDIVVKNTNELADRIEKVIPIKDQLFTPRMEGANEEIRELSYTNAKKLYGDDLPQIVIDRLEKELDSIIGNGFSVIYLISQRLVKKSLDDGYLVGSRGSVGSSFVATMTEITEVNPLPPHYICPHCKTSEFFDDGSVGSGFDLPDKTCETCGGELIKEGQDIPFETFLGFKGDKVPDIDLNFSGEYQPHAHNYTKVLFGEDKVFRAGTIGTVAEKTAFGFVKGYLNDQGIHKRGAEIDRLVKGCTGVKRTTGQHPGGIIVVPDYMDIYDFTPIQYPADDQSASWMTTHFDFHSIHDNVLKLDILGHDDPTMIRMLQDLSGIDPKTIPVDDKETMQIFSSPASLGVTEEDILCKTGTFGVPEFGTGFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIRSGICDLSSVIGCRDDIMVYLMYAGLEPSMAFKTMESVRKGKGLTDEMIDAMKANDVPDWYLDSCLKIKYMFPKAHAAAYVLMAVRIAYFKVHHPLYYYAAYFTIRASDFDLITMIKDKESIKNTVKDMYSRYMDLGKKEKDVLTVLEIMNEMAHRGFKMQPISLEKSQAFDFIIEDDTLIPPFIAVPGLGENVAKRIVEAREDGPFLSKEDLNKKAGLSQKIIEYLDDLGSLPDLPDKAQLSIFDM persistent 1438 polC PolC-type DNA polymerase III 2.7.7.7 GO:0003677,GO:0003887,GO:0005737,GO:0006260,GO:0006261,GO:0008408 COG2176,L UniRef50_Q2G1Z8,UniRef90_Q2G1Z8 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 58932 60632 . - . GCA_005502385.1_01012_gene GCA_005502385.1_01012 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKQSKVFIPTMREVPSEAEALSHQLLLKAGLIKQSTSGIYSYLPLATRVLNHISKIIREEMENIDAVEILMPALQQAELWEESGRWGAYGPELMRLKDRNGREFALGPTHEEVVTSIVRDELKSYKQLPLTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQEMYNAYSRIFKRVGINARPVVADSGAIGGNHTHEFMALSEIGEDTIVYSENSDYAANIEKAEVKYYPNEKHTDIKSLEKIETPNIKTAQELADFLNRPIDEIVKTMIFKVDGEFMMFLVRGHHELNDVKVKAYFETDNVEMATQDEIVNLLGANPGSLGPIHNKDIKIIADNFVKDLNNIVVGANEDGYHYINANVERDFNIDEYGDFRFILEGEPLSDGSGNAKFAEGIEVGQVFKLGTKYSEAMNAKFLDNQGKAQPLIMGCYGIGVSRTLSAIVEQNNDENGIIWPKSVTPFDLHLITINPKKEEQLELGDKLYSELQSKYDVLYDDRKERAGVKFNDADLIGLPIRIVVGKNASEGIVEVKVRQTGESEEVHVNELDNHIASLYEKL . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 58932 60632 . - . GCA_005502385.1_01012_mRNA GCA_005502385.1_01012 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKQSKVFIPTMREVPSEAEALSHQLLLKAGLIKQSTSGIYSYLPLATRVLNHISKIIREEMENIDAVEILMPALQQAELWEESGRWGAYGPELMRLKDRNGREFALGPTHEEVVTSIVRDELKSYKQLPLTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQEMYNAYSRIFKRVGINARPVVADSGAIGGNHTHEFMALSEIGEDTIVYSENSDYAANIEKAEVKYYPNEKHTDIKSLEKIETPNIKTAQELADFLNRPIDEIVKTMIFKVDGEFMMFLVRGHHELNDVKVKAYFETDNVEMATQDEIVNLLGANPGSLGPIHNKDIKIIADNFVKDLNNIVVGANEDGYHYINANVERDFNIDEYGDFRFILEGEPLSDGSGNAKFAEGIEVGQVFKLGTKYSEAMNAKFLDNQGKAQPLIMGCYGIGVSRTLSAIVEQNNDENGIIWPKSVTPFDLHLITINPKKEEQLELGDKLYSELQSKYDVLYDDRKERAGVKFNDADLIGLPIRIVVGKNASEGIVEVKVRQTGESEEVHVNELDNHIASLYEKL . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 58932 60632 . - 0 GCA_005502385.1_01012 GCA_005502385.1_01012_gene,GCA_005502385.1_01012_mRNA GCA_005502385.1_01012 Proline--tRNA ligase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKQSKVFIPTMREVPSEAEALSHQLLLKAGLIKQSTSGIYSYLPLATRVLNHISKIIREEMENIDAVEILMPALQQAELWEESGRWGAYGPELMRLKDRNGREFALGPTHEEVVTSIVRDELKSYKQLPLTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQEMYNAYSRIFKRVGINARPVVADSGAIGGNHTHEFMALSEIGEDTIVYSENSDYAANIEKAEVKYYPNEKHTDIKSLEKIETPNIKTAQELADFLNRPIDEIVKTMIFKVDGEFMMFLVRGHHELNDVKVKAYFETDNVEMATQDEIVNLLGANPGSLGPIHNKDIKIIADNFVKDLNNIVVGANEDGYHYINANVERDFNIDEYGDFRFILEGEPLSDGSGNAKFAEGIEVGQVFKLGTKYSEAMNAKFLDNQGKAQPLIMGCYGIGVSRTLSAIVEQNNDENGIIWPKSVTPFDLHLITINPKKEEQLELGDKLYSELQSKYDVLYDDRKERAGVKFNDADLIGLPIRIVVGKNASEGIVEVKVRQTGESEEVHVNELDNHIASLYEKL persistent 566 proS proline--tRNA ligase 6.1.1.15 GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524,GO:0005829,GO:0006418,GO:0006433,GO:0016740 COG0442,J WP_017174607.1 UPI0002FA75EC UniRef100_A0A8X8GPR6,UniRef50_Q2G1Z4,UniRef90_Q4L5W5 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 60649 61935 . - . GCA_005502385.1_01013_gene GCA_005502385.1_01013 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSYLITIVSFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKDETLYTIRLLPVGGYVRMAGDGLEEPPVQPGMNVKIKLNEQDEITHIILDDQHKFQKIEAIEVKRCDFKDDLYIEGITAYDNERHHFNIAKKAYFVENGSLIQIAPRHRQFTHKKPLPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTPTVKQLADHYPAQEAGLKPGDKIVQVGHYKINDFSDIQNALNKTKDHQTTIKIVRYGHTKSLDVTPKKQVIKQTKLNSKTSYVLGFQPANEHSLFKPLALGVQQFFDKSVLIFKAVGTMIGSIFTGGFTFDMLNGPVGIYHNVDSVVKQGIIALTYYTALLSVNLGIMNLLPIPALDGGRILFVIYEAIFRRPVNKRAETAIIAVGAIFVVIIMVLVTWNDIQRYFL . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 60649 61935 . - . GCA_005502385.1_01013_mRNA GCA_005502385.1_01013 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSYLITIVSFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKDETLYTIRLLPVGGYVRMAGDGLEEPPVQPGMNVKIKLNEQDEITHIILDDQHKFQKIEAIEVKRCDFKDDLYIEGITAYDNERHHFNIAKKAYFVENGSLIQIAPRHRQFTHKKPLPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTPTVKQLADHYPAQEAGLKPGDKIVQVGHYKINDFSDIQNALNKTKDHQTTIKIVRYGHTKSLDVTPKKQVIKQTKLNSKTSYVLGFQPANEHSLFKPLALGVQQFFDKSVLIFKAVGTMIGSIFTGGFTFDMLNGPVGIYHNVDSVVKQGIIALTYYTALLSVNLGIMNLLPIPALDGGRILFVIYEAIFRRPVNKRAETAIIAVGAIFVVIIMVLVTWNDIQRYFL . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 60649 61935 . - 0 GCA_005502385.1_01013 GCA_005502385.1_01013_gene,GCA_005502385.1_01013_mRNA GCA_005502385.1_01013 Putative zinc metalloprotease GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSYLITIVSFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKDETLYTIRLLPVGGYVRMAGDGLEEPPVQPGMNVKIKLNEQDEITHIILDDQHKFQKIEAIEVKRCDFKDDLYIEGITAYDNERHHFNIAKKAYFVENGSLIQIAPRHRQFTHKKPLPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTPTVKQLADHYPAQEAGLKPGDKIVQVGHYKINDFSDIQNALNKTKDHQTTIKIVRYGHTKSLDVTPKKQVIKQTKLNSKTSYVLGFQPANEHSLFKPLALGVQQFFDKSVLIFKAVGTMIGSIFTGGFTFDMLNGPVGIYHNVDSVVKQGIIALTYYTALLSVNLGIMNLLPIPALDGGRILFVIYEAIFRRPVNKRAETAIIAVGAIFVVIIMVLVTWNDIQRYFL persistent 428 rseP RIP metalloprotease RseP GO:0004222,GO:0006508,GO:0016020 WP_070585931.1 UPI0008A3AA62 UniRef100_UPI0008A3AA62,UniRef50_P63333,UniRef90_A0A974QP02 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 62148 62930 . - . GCA_005502385.1_01014_gene GCA_005502385.1_01014 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKVRTLTAIIALLIFLPILLKGGTILMLFAYLLALIALKELLNMNMIKFLSIPGIFSAIALIIIMLPQSAGDWVSDVQLKSLIAMSFILLSYTVLSKNRFSFMDAAFCLMSVAYVGIGFMYFYATRSYGLHYILFAFLIVWLTDTGAYIFGRLMGKHKLWPVISPNKTIEGFIGGLICSLIVPLVMMFFVDFHLNIWLLLLITIILSVFGQLGDLVESGFKRHFGVKDSGRILPGHGGILDRFDSFMFVLPLLNILLLQM . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 62148 62930 . - . GCA_005502385.1_01014_mRNA GCA_005502385.1_01014 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKVRTLTAIIALLIFLPILLKGGTILMLFAYLLALIALKELLNMNMIKFLSIPGIFSAIALIIIMLPQSAGDWVSDVQLKSLIAMSFILLSYTVLSKNRFSFMDAAFCLMSVAYVGIGFMYFYATRSYGLHYILFAFLIVWLTDTGAYIFGRLMGKHKLWPVISPNKTIEGFIGGLICSLIVPLVMMFFVDFHLNIWLLLLITIILSVFGQLGDLVESGFKRHFGVKDSGRILPGHGGILDRFDSFMFVLPLLNILLLQM . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 62148 62930 . - 0 GCA_005502385.1_01014 GCA_005502385.1_01014_gene,GCA_005502385.1_01014_mRNA GCA_005502385.1_01014 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKVRTLTAIIALLIFLPILLKGGTILMLFAYLLALIALKELLNMNMIKFLSIPGIFSAIALIIIMLPQSAGDWVSDVQLKSLIAMSFILLSYTVLSKNRFSFMDAAFCLMSVAYVGIGFMYFYATRSYGLHYILFAFLIVWLTDTGAYIFGRLMGKHKLWPVISPNKTIEGFIGGLICSLIVPLVMMFFVDFHLNIWLLLLITIILSVFGQLGDLVESGFKRHFGVKDSGRILPGHGGILDRFDSFMFVLPLLNILLLQM persistent 260 cdsA Phosphatidate cytidylyltransferase 2.7.7.41 GO:0004605,GO:0005886,GO:0016024 COG0575,I WP_017174605.1 UPI0002D2986E UniRef100_A0A8X8GL79,UniRef50_Q5HPT0,UniRef90_Q4L5W3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 62934 63704 . - . GCA_005502385.1_01015_gene GCA_005502385.1_01015 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MFRKLIKRNKTKINQNDDLDIHNLPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKVTREASHLGIKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKIETIGFLDAVPQSTIEAINYAKEKTKNNTGLKLVFAINYGGRAELVQSMKSIYDELQRNGQNSDDIDELMISKHLMTHPDPDPDLLIRTSGEQRLSNFLIWQASYSEFIFNEKLWPDFDGEELKQCIKIYQSRQRRFGGLSEE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 62934 63704 . - . GCA_005502385.1_01015_mRNA GCA_005502385.1_01015 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MFRKLIKRNKTKINQNDDLDIHNLPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKVTREASHLGIKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKIETIGFLDAVPQSTIEAINYAKEKTKNNTGLKLVFAINYGGRAELVQSMKSIYDELQRNGQNSDDIDELMISKHLMTHPDPDPDLLIRTSGEQRLSNFLIWQASYSEFIFNEKLWPDFDGEELKQCIKIYQSRQRRFGGLSEE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 62934 63704 . - 0 GCA_005502385.1_01015 GCA_005502385.1_01015_gene,GCA_005502385.1_01015_mRNA GCA_005502385.1_01015 Isoprenyl transferase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MFRKLIKRNKTKINQNDDLDIHNLPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKVTREASHLGIKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKIETIGFLDAVPQSTIEAINYAKEKTKNNTGLKLVFAINYGGRAELVQSMKSIYDELQRNGQNSDDIDELMISKHLMTHPDPDPDLLIRTSGEQRLSNFLIWQASYSEFIFNEKLWPDFDGEELKQCIKIYQSRQRRFGGLSEE persistent 256 isoprenyl transferase GO:0016765 WP_017174604.1 UPI0002FC64DF UniRef100_A0A8X8GNE4,UniRef50_O82827,UniRef90_A0AAE5JMX8 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 63890 64444 . - . GCA_005502385.1_01016_gene GCA_005502385.1_01016 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSEIIQDTKSRMKKSIENLSRELANISAGRANSNLLNGVNVDYYGAPTPVQQLASINVPEARLLVISPYDKSSVADIEKAIIAANLGVNPTSDGEVIRITVPALTEERRKELVKNVKKIGEDSKVSIRNIRRDINDQLKKDEKNGDITEDDLRSQTEDVQKVTDNSIKEIDNLVDEKEKDIMSV . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 63890 64444 . - . GCA_005502385.1_01016_mRNA GCA_005502385.1_01016 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSEIIQDTKSRMKKSIENLSRELANISAGRANSNLLNGVNVDYYGAPTPVQQLASINVPEARLLVISPYDKSSVADIEKAIIAANLGVNPTSDGEVIRITVPALTEERRKELVKNVKKIGEDSKVSIRNIRRDINDQLKKDEKNGDITEDDLRSQTEDVQKVTDNSIKEIDNLVDEKEKDIMSV . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 63890 64444 . - 0 GCA_005502385.1_01016 GCA_005502385.1_01016_gene,GCA_005502385.1_01016_mRNA GCA_005502385.1_01016 Ribosome-recycling factor GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSEIIQDTKSRMKKSIENLSRELANISAGRANSNLLNGVNVDYYGAPTPVQQLASINVPEARLLVISPYDKSSVADIEKAIIAANLGVNPTSDGEVIRITVPALTEERRKELVKNVKKIGEDSKVSIRNIRRDINDQLKKDEKNGDITEDDLRSQTEDVQKVTDNSIKEIDNLVDEKEKDIMSV persistent 184 frr ribosome recycling factor GO:0005737,GO:0006412,GO:0006415,GO:0008135,GO:0043023 COG0233,J WP_017174603.1 UPI0002F741F1 UniRef100_A0A2A1MEA4,UniRef50_Q044C7,UniRef90_Q5HPT2 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 64461 65183 . - . GCA_005502385.1_01017_gene GCA_005502385.1_01017 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAQTSKYKRVVLKLSGEALAGEKGFGINPIIIKSVAKQVAEVAKMDCEIAVIVGGGNIWRGKTGSDLGMDRGTADYMGMLATVMNALALQDSLEQLDCDTRVLTSIEMKQVAEPYIRRRAIRHLEKKRVVIFAAGIGNPYFSTDTTAALRAAEVEADVILMGKNNVDGVYSADPKIDKNAVKYDHLTHIQMLQEGLQVMDSTASSFCMDNNIPLNVFSIMEEGNIKRAVMGEKIGTLITK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 64461 65183 . - . GCA_005502385.1_01017_mRNA GCA_005502385.1_01017 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAQTSKYKRVVLKLSGEALAGEKGFGINPIIIKSVAKQVAEVAKMDCEIAVIVGGGNIWRGKTGSDLGMDRGTADYMGMLATVMNALALQDSLEQLDCDTRVLTSIEMKQVAEPYIRRRAIRHLEKKRVVIFAAGIGNPYFSTDTTAALRAAEVEADVILMGKNNVDGVYSADPKIDKNAVKYDHLTHIQMLQEGLQVMDSTASSFCMDNNIPLNVFSIMEEGNIKRAVMGEKIGTLITK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 64461 65183 . - 0 GCA_005502385.1_01017 GCA_005502385.1_01017_gene,GCA_005502385.1_01017_mRNA GCA_005502385.1_01017 Uridylate kinase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAQTSKYKRVVLKLSGEALAGEKGFGINPIIIKSVAKQVAEVAKMDCEIAVIVGGGNIWRGKTGSDLGMDRGTADYMGMLATVMNALALQDSLEQLDCDTRVLTSIEMKQVAEPYIRRRAIRHLEKKRVVIFAAGIGNPYFSTDTTAALRAAEVEADVILMGKNNVDGVYSADPKIDKNAVKYDHLTHIQMLQEGLQVMDSTASSFCMDNNIPLNVFSIMEEGNIKRAVMGEKIGTLITK persistent 240 pyrH UMP kinase 2.7.4.22 GO:0005524,GO:0005737,GO:0006221,GO:0006225,GO:0015949,GO:0033862,GO:0044210 COG0528,F WP_017174602.1 UPI0002ECF2A9 UniRef100_A0A4Q9WSG6,UniRef50_O31749,UniRef90_Q2FZ22 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 65322 66200 . - . GCA_005502385.1_01018_gene GCA_005502385.1_01018 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAISAKLVKELRERTGAGMMDCKKALTETDGDIDKAIDYLREKGIAKAAKKADRIAAEGLVHVEVKGNEAAIVEINSETDFVARNEGFQELVKEIANQILESKAETVEALLETKLASGQTVDERMKEAISTIGEKLSIRRFAIRTKSDNDAFGAYLHMGGRIGVLTVVEGSTDEEAAKDVAMHIAAINPKYVSSDQVSDEEINHEREVLKQQALNEGKPENIVEKMVEGRLRKYLQEICAVDQNFVKDPDQTVEAFLKSKGGKLADFVRYEVGEGMEKREENFADEVKGQMK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 65322 66200 . - . GCA_005502385.1_01018_mRNA GCA_005502385.1_01018 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAISAKLVKELRERTGAGMMDCKKALTETDGDIDKAIDYLREKGIAKAAKKADRIAAEGLVHVEVKGNEAAIVEINSETDFVARNEGFQELVKEIANQILESKAETVEALLETKLASGQTVDERMKEAISTIGEKLSIRRFAIRTKSDNDAFGAYLHMGGRIGVLTVVEGSTDEEAAKDVAMHIAAINPKYVSSDQVSDEEINHEREVLKQQALNEGKPENIVEKMVEGRLRKYLQEICAVDQNFVKDPDQTVEAFLKSKGGKLADFVRYEVGEGMEKREENFADEVKGQMK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 65322 66200 . - 0 GCA_005502385.1_01018 GCA_005502385.1_01018_gene,GCA_005502385.1_01018_mRNA GCA_005502385.1_01018 Elongation factor Ts GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAISAKLVKELRERTGAGMMDCKKALTETDGDIDKAIDYLREKGIAKAAKKADRIAAEGLVHVEVKGNEAAIVEINSETDFVARNEGFQELVKEIANQILESKAETVEALLETKLASGQTVDERMKEAISTIGEKLSIRRFAIRTKSDNDAFGAYLHMGGRIGVLTVVEGSTDEEAAKDVAMHIAAINPKYVSSDQVSDEEINHEREVLKQQALNEGKPENIVEKMVEGRLRKYLQEICAVDQNFVKDPDQTVEAFLKSKGGKLADFVRYEVGEGMEKREENFADEVKGQMK persistent 292 tsf translation elongation factor Ts GO:0003746,GO:0005737,GO:0006414 COG0264,J WP_017174601.1 UPI0002D6AF30 UniRef100_A0A4Q9WSH4,UniRef50_Q2FZ23,UniRef90_Q2FZ23 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 66461 67249 . - . GCA_005502385.1_01019_gene GCA_005502385.1_01019 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFLKQVSEDGGKVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKMEEDGLFDVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLNIPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAVLEGQQGISNDEVAAEQNIDLDESEETQKAESTEENTTVESN . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 66461 67249 . - . GCA_005502385.1_01019_mRNA GCA_005502385.1_01019 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFLKQVSEDGGKVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKMEEDGLFDVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLNIPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAVLEGQQGISNDEVAAEQNIDLDESEETQKAESTEENTTVESN . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 66461 67249 . - 0 GCA_005502385.1_01019 GCA_005502385.1_01019_gene,GCA_005502385.1_01019_mRNA GCA_005502385.1_01019 30S ribosomal protein S2 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFLKQVSEDGGKVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKMEEDGLFDVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLNIPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAVLEGQQGISNDEVAAEQNIDLDESEETQKAESTEENTTVESN persistent 262 rpsB 30S ribosomal protein S2 GO:0003735,GO:0006412,GO:0015935,GO:0022627 COG0052,J WP_002448842.1 UPI00019FC7BB UniRef100_A0A1L8Y9T6,UniRef50_P21464,UniRef90_Q2FZ25 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 67470 68246 . - . GCA_005502385.1_01020_gene GCA_005502385.1_01020 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSLLSKTRELNTLLQKHKGIAVDFKDVAQTISNVTVTNVFIVSRRGKILGSSLNELLKSERISNMLTESKHIPSEYTELLMQVQQTEANIDIDSDLTVFPPEHRDVFINSRTTIFPILGGGERLGTLILGRVKDDFNENDLVLGEYAATVIGMEILREKHNEVEKEARDKAAITMAINSLSYSEKEAIEHIFEELGGNEGLLIASKVADRVGITRSVIVNALRKLESAGVIESRSLGMKGTFIKVKKEKFLDELNRSE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 67470 68246 . - . GCA_005502385.1_01020_mRNA GCA_005502385.1_01020 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSLLSKTRELNTLLQKHKGIAVDFKDVAQTISNVTVTNVFIVSRRGKILGSSLNELLKSERISNMLTESKHIPSEYTELLMQVQQTEANIDIDSDLTVFPPEHRDVFINSRTTIFPILGGGERLGTLILGRVKDDFNENDLVLGEYAATVIGMEILREKHNEVEKEARDKAAITMAINSLSYSEKEAIEHIFEELGGNEGLLIASKVADRVGITRSVIVNALRKLESAGVIESRSLGMKGTFIKVKKEKFLDELNRSE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 67470 68246 . - 0 GCA_005502385.1_01020 GCA_005502385.1_01020_gene,GCA_005502385.1_01020_mRNA GCA_005502385.1_01020 GTP-sensing transcriptional pleiotropic repressor CodY GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSLLSKTRELNTLLQKHKGIAVDFKDVAQTISNVTVTNVFIVSRRGKILGSSLNELLKSERISNMLTESKHIPSEYTELLMQVQQTEANIDIDSDLTVFPPEHRDVFINSRTTIFPILGGGERLGTLILGRVKDDFNENDLVLGEYAATVIGMEILREKHNEVEKEARDKAAITMAINSLSYSEKEAIEHIFEELGGNEGLLIASKVADRVGITRSVIVNALRKLESAGVIESRSLGMKGTFIKVKKEKFLDELNRSE persistent 258 codY GTP-sensing pleiotropic transcriptional regulator CodY GO:0003677,GO:0003700,GO:0005525,GO:0005737,GO:0045892 COG4465,K WP_017174600.1 UPI0002E21C7D UniRef100_A0A4Q9WSJ7,UniRef50_P39779,UniRef90_Q2FZ27 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 68268 69668 . - . GCA_005502385.1_01021_gene GCA_005502385.1_01021 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDANGIKLTPKDIVSKLDEYIVGQEDAKRKVAIALRNRYRRSLLDEETKQEIAPKNILMIGPTGVGKTEIARRMAKVVGAPFIKVEATKFTEVGYVGRDVESMVRDLVDVSVRLVKEQKKSLVEDEATQKANEKLVKLLVPSMKKKAAQNNNPLESLLGGAIPNFNQNDEEEEAPTEEIKTKRSEIRQQLLAGKLEEEKVRIKVEQDPGALGMLGTSQNQQMQDMMNQLMPKRKVEREVPVKTARKILTDDFADELIDQETANQEALELAEQMGIIFIDEIDKVATNNSNSGQDVSRQGVQRDILPILEGSMIQTKYGTVNTEHMLFIGAGAFHVSKPSDLIPELQGRFPIRVELESLTVNDFYRILTEPKLSLIKQYEALLKTEEVTVNFSDEAITRLAEMAYQVNQDTDNIGARRLHTILEKMLEDLSFEAPNMPNAVVDITPQYVDDKLKSISTNKDLSAFIL . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 68268 69668 . - . GCA_005502385.1_01021_mRNA GCA_005502385.1_01021 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDANGIKLTPKDIVSKLDEYIVGQEDAKRKVAIALRNRYRRSLLDEETKQEIAPKNILMIGPTGVGKTEIARRMAKVVGAPFIKVEATKFTEVGYVGRDVESMVRDLVDVSVRLVKEQKKSLVEDEATQKANEKLVKLLVPSMKKKAAQNNNPLESLLGGAIPNFNQNDEEEEAPTEEIKTKRSEIRQQLLAGKLEEEKVRIKVEQDPGALGMLGTSQNQQMQDMMNQLMPKRKVEREVPVKTARKILTDDFADELIDQETANQEALELAEQMGIIFIDEIDKVATNNSNSGQDVSRQGVQRDILPILEGSMIQTKYGTVNTEHMLFIGAGAFHVSKPSDLIPELQGRFPIRVELESLTVNDFYRILTEPKLSLIKQYEALLKTEEVTVNFSDEAITRLAEMAYQVNQDTDNIGARRLHTILEKMLEDLSFEAPNMPNAVVDITPQYVDDKLKSISTNKDLSAFIL . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 68268 69668 . - 0 GCA_005502385.1_01021 GCA_005502385.1_01021_gene,GCA_005502385.1_01021_mRNA GCA_005502385.1_01021 ATP-dependent protease ATPase subunit HslU GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDANGIKLTPKDIVSKLDEYIVGQEDAKRKVAIALRNRYRRSLLDEETKQEIAPKNILMIGPTGVGKTEIARRMAKVVGAPFIKVEATKFTEVGYVGRDVESMVRDLVDVSVRLVKEQKKSLVEDEATQKANEKLVKLLVPSMKKKAAQNNNPLESLLGGAIPNFNQNDEEEEAPTEEIKTKRSEIRQQLLAGKLEEEKVRIKVEQDPGALGMLGTSQNQQMQDMMNQLMPKRKVEREVPVKTARKILTDDFADELIDQETANQEALELAEQMGIIFIDEIDKVATNNSNSGQDVSRQGVQRDILPILEGSMIQTKYGTVNTEHMLFIGAGAFHVSKPSDLIPELQGRFPIRVELESLTVNDFYRILTEPKLSLIKQYEALLKTEEVTVNFSDEAITRLAEMAYQVNQDTDNIGARRLHTILEKMLEDLSFEAPNMPNAVVDITPQYVDDKLKSISTNKDLSAFIL persistent 466 hslU ATP-dependent protease ATPase subunit HslU 3.4.25.2 GO:0005524,GO:0008233,GO:0009376,GO:0016887,GO:0036402,GO:0043335,GO:0051603 COG1220,O WP_017174599.1 UPI0003177966 UniRef100_A0A4Q9WTL7,UniRef50_P63796,UniRef90_P63796 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 69735 70280 . - . GCA_005502385.1_01022_gene GCA_005502385.1_01022 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKTSLHATTIYAVRHNGEAAMAGDGQVTLGEQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTLFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDGILVVSGTGEVIAPDDDLIAIGSGGNYALSAGRALKRHASHMTAKEMAYESLKVASDICVFTNDNIIVETL . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 69735 70280 . - . GCA_005502385.1_01022_mRNA GCA_005502385.1_01022 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKTSLHATTIYAVRHNGEAAMAGDGQVTLGEQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTLFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDGILVVSGTGEVIAPDDDLIAIGSGGNYALSAGRALKRHASHMTAKEMAYESLKVASDICVFTNDNIIVETL . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 69735 70280 . - 0 GCA_005502385.1_01022 GCA_005502385.1_01022_gene,GCA_005502385.1_01022_mRNA GCA_005502385.1_01022 ATP-dependent protease subunit HslV GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKTSLHATTIYAVRHNGEAAMAGDGQVTLGEQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTLFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDGILVVSGTGEVIAPDDDLIAIGSGGNYALSAGRALKRHASHMTAKEMAYESLKVASDICVFTNDNIIVETL persistent 181 hslV ATP-dependent protease subunit HslV 3.4.25.2 GO:0004298,GO:0005839,GO:0009376,GO:0046872,GO:0051603 COG5405,O WP_002448739.1 UPI00019FC7BF UniRef100_A0A1L8Y9S9,UniRef50_Q2FZ29,UniRef90_Q2FZ29 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 70281 71174 . - . GCA_005502385.1_01023_gene GCA_005502385.1_01023 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEEIQKKFLNMLKVERNFSDHTLKAYHDDLAQFNQFLEQELLNLRTFEYKDARNYLSYLYSNNLKRTTVSRKISTLRTFYEFWMTQDTSVNNPFIQLVHPKKEQYLPQFFYEEEMEALFNTVSNDAKKGLRDRVVIELLYATGIRVSELVNIKVMDLDMNLPGVKVLGKGNKERFVPFGEFCRQSIEQYLEKFKPLKGKSHPYLIVNMKGDPITERGIRYLLNDVVKRTAGVTEIHPHKLRHTFATHLLNQGADLRTVQSLLGHVNLSTTGKYTHVSNQQLRKVYLNAHPRAKKESK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 70281 71174 . - . GCA_005502385.1_01023_mRNA GCA_005502385.1_01023 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEEIQKKFLNMLKVERNFSDHTLKAYHDDLAQFNQFLEQELLNLRTFEYKDARNYLSYLYSNNLKRTTVSRKISTLRTFYEFWMTQDTSVNNPFIQLVHPKKEQYLPQFFYEEEMEALFNTVSNDAKKGLRDRVVIELLYATGIRVSELVNIKVMDLDMNLPGVKVLGKGNKERFVPFGEFCRQSIEQYLEKFKPLKGKSHPYLIVNMKGDPITERGIRYLLNDVVKRTAGVTEIHPHKLRHTFATHLLNQGADLRTVQSLLGHVNLSTTGKYTHVSNQQLRKVYLNAHPRAKKESK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 70281 71174 . - 0 GCA_005502385.1_01023 GCA_005502385.1_01023_gene,GCA_005502385.1_01023_mRNA GCA_005502385.1_01023 Tyrosine recombinase XerC GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEEIQKKFLNMLKVERNFSDHTLKAYHDDLAQFNQFLEQELLNLRTFEYKDARNYLSYLYSNNLKRTTVSRKISTLRTFYEFWMTQDTSVNNPFIQLVHPKKEQYLPQFFYEEEMEALFNTVSNDAKKGLRDRVVIELLYATGIRVSELVNIKVMDLDMNLPGVKVLGKGNKERFVPFGEFCRQSIEQYLEKFKPLKGKSHPYLIVNMKGDPITERGIRYLLNDVVKRTAGVTEIHPHKLRHTFATHLLNQGADLRTVQSLLGHVNLSTTGKYTHVSNQQLRKVYLNAHPRAKKESK persistent 297 xerC tyrosine recombinase XerC GO:0003677,GO:0006310,GO:0007059,GO:0015074,GO:0051301 WP_017174598.1 UPI0002DCC052 UniRef100_A0A4Q9WSH8,UniRef50_Q2FZ30,UniRef90_A0A6N0I3X6 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 71312 72619 . - . GCA_005502385.1_01024_gene GCA_005502385.1_01024 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSQTVNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNGVGVLKEEMRRLDSLIIAAADKARVPAGGALAVDRHDFAGYITDTLKNHPNVTVLNKEIHSIPEGHTIIATGPLTTEHLAKEIVEITGKDQLYFYDAAAPIIEKDSIDMDKVYLKSRYDKGEAAYLNCPMTEEEFNRFYDAVLEAEVAPVNEFEKEKYFEGCMPFEVMAGRGRKTLLFGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIQLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELINNDRIQFAGQMTGVEGYVESAASGLVAGINLAHKLLGKGEVIFPRETMIGSMAYYISHAKNEKNFQPMNANFGLLPSLDRRIKDKKERYEAQAYRALDYLENFKKTL . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 71312 72619 . - . GCA_005502385.1_01024_mRNA GCA_005502385.1_01024 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSQTVNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNGVGVLKEEMRRLDSLIIAAADKARVPAGGALAVDRHDFAGYITDTLKNHPNVTVLNKEIHSIPEGHTIIATGPLTTEHLAKEIVEITGKDQLYFYDAAAPIIEKDSIDMDKVYLKSRYDKGEAAYLNCPMTEEEFNRFYDAVLEAEVAPVNEFEKEKYFEGCMPFEVMAGRGRKTLLFGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIQLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELINNDRIQFAGQMTGVEGYVESAASGLVAGINLAHKLLGKGEVIFPRETMIGSMAYYISHAKNEKNFQPMNANFGLLPSLDRRIKDKKERYEAQAYRALDYLENFKKTL . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 71312 72619 . - 0 GCA_005502385.1_01024 GCA_005502385.1_01024_gene,GCA_005502385.1_01024_mRNA GCA_005502385.1_01024 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSQTVNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNGVGVLKEEMRRLDSLIIAAADKARVPAGGALAVDRHDFAGYITDTLKNHPNVTVLNKEIHSIPEGHTIIATGPLTTEHLAKEIVEITGKDQLYFYDAAAPIIEKDSIDMDKVYLKSRYDKGEAAYLNCPMTEEEFNRFYDAVLEAEVAPVNEFEKEKYFEGCMPFEVMAGRGRKTLLFGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIQLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELINNDRIQFAGQMTGVEGYVESAASGLVAGINLAHKLLGKGEVIFPRETMIGSMAYYISHAKNEKNFQPMNANFGLLPSLDRRIKDKKERYEAQAYRALDYLENFKKTL persistent 435 trmFO methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO 2.1.1.74 GO:0002098,GO:0005829,GO:0008033,GO:0030488,GO:0047151,GO:0050660 COG1206,J WP_002455420.1 UPI0001EF504F UniRef100_UPI0001EF504F,UniRef50_Q2FZ31,UniRef90_Q2FZ31 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 72643 74712 . - . GCA_005502385.1_01025_gene GCA_005502385.1_01025 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MADNLVIVESPAKAKTIEKYLGKRYKVIASMGHVRDLPRSQMGVDVEDNYEPKYITIRGKGPVVKDLKKYAKKAKKVFLASDPDREGEAIAWHLSKILELEESKENRVVFNEITKDAVKESFKHPRGIEMNLVDAQQARRILDRLVGYNISPVLWKKVKKGLSAGRVQSVALRLVIDRENEIRNFKPEEYWSIEGEFRYKKSKFTAKFLHYKNKPYKLKTKKDVEKITSELNGDEFEITNVNKKEKTRYPANPFTTSTLQQEAARKLNFKARKTMMLAQQLYEGIDLKRQGTVGLITYMRTDSTRISQTAKDEAKSYIEEKYGTEYTSNRKTKGKQGDQDAHEAIRPTSTLRTPDEMKAYLTRDQHRLYKLIWERFVASQMAPAVLDTVALDVTQNDIKFRANGQTIKFKGFMTLYVEAKDDKDNDKENKLPKLNQGDKVTATQIEPAQHFTQPPPRYTEARLVKTLEELKIGRPSTYAPTIDTIQKRNYVKLESKRFVPTELGEIVYEQVKDYFPEIIDVEFTVNMETLLDKIAEGDIGWRKVIDNFYGSFKLDVARAEEEMEKVEIKDEPAGEDCEVCGAPMVIKMGRYGKFMACSNFPDCRNTKAIVKTIGVTCPKCKDGDVVERKSKKNRLFYGCSNYPECDFISWDKPIGRDCPKCNHYLMQHKKGRSSQVICSNCDYKEEVQK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 72643 74712 . - . GCA_005502385.1_01025_mRNA GCA_005502385.1_01025 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MADNLVIVESPAKAKTIEKYLGKRYKVIASMGHVRDLPRSQMGVDVEDNYEPKYITIRGKGPVVKDLKKYAKKAKKVFLASDPDREGEAIAWHLSKILELEESKENRVVFNEITKDAVKESFKHPRGIEMNLVDAQQARRILDRLVGYNISPVLWKKVKKGLSAGRVQSVALRLVIDRENEIRNFKPEEYWSIEGEFRYKKSKFTAKFLHYKNKPYKLKTKKDVEKITSELNGDEFEITNVNKKEKTRYPANPFTTSTLQQEAARKLNFKARKTMMLAQQLYEGIDLKRQGTVGLITYMRTDSTRISQTAKDEAKSYIEEKYGTEYTSNRKTKGKQGDQDAHEAIRPTSTLRTPDEMKAYLTRDQHRLYKLIWERFVASQMAPAVLDTVALDVTQNDIKFRANGQTIKFKGFMTLYVEAKDDKDNDKENKLPKLNQGDKVTATQIEPAQHFTQPPPRYTEARLVKTLEELKIGRPSTYAPTIDTIQKRNYVKLESKRFVPTELGEIVYEQVKDYFPEIIDVEFTVNMETLLDKIAEGDIGWRKVIDNFYGSFKLDVARAEEEMEKVEIKDEPAGEDCEVCGAPMVIKMGRYGKFMACSNFPDCRNTKAIVKTIGVTCPKCKDGDVVERKSKKNRLFYGCSNYPECDFISWDKPIGRDCPKCNHYLMQHKKGRSSQVICSNCDYKEEVQK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 72643 74712 . - 0 GCA_005502385.1_01025 GCA_005502385.1_01025_gene,GCA_005502385.1_01025_mRNA GCA_005502385.1_01025 DNA topoisomerase 1 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MADNLVIVESPAKAKTIEKYLGKRYKVIASMGHVRDLPRSQMGVDVEDNYEPKYITIRGKGPVVKDLKKYAKKAKKVFLASDPDREGEAIAWHLSKILELEESKENRVVFNEITKDAVKESFKHPRGIEMNLVDAQQARRILDRLVGYNISPVLWKKVKKGLSAGRVQSVALRLVIDRENEIRNFKPEEYWSIEGEFRYKKSKFTAKFLHYKNKPYKLKTKKDVEKITSELNGDEFEITNVNKKEKTRYPANPFTTSTLQQEAARKLNFKARKTMMLAQQLYEGIDLKRQGTVGLITYMRTDSTRISQTAKDEAKSYIEEKYGTEYTSNRKTKGKQGDQDAHEAIRPTSTLRTPDEMKAYLTRDQHRLYKLIWERFVASQMAPAVLDTVALDVTQNDIKFRANGQTIKFKGFMTLYVEAKDDKDNDKENKLPKLNQGDKVTATQIEPAQHFTQPPPRYTEARLVKTLEELKIGRPSTYAPTIDTIQKRNYVKLESKRFVPTELGEIVYEQVKDYFPEIIDVEFTVNMETLLDKIAEGDIGWRKVIDNFYGSFKLDVARAEEEMEKVEIKDEPAGEDCEVCGAPMVIKMGRYGKFMACSNFPDCRNTKAIVKTIGVTCPKCKDGDVVERKSKKNRLFYGCSNYPECDFISWDKPIGRDCPKCNHYLMQHKKGRSSQVICSNCDYKEEVQK persistent 689 topA type I DNA topoisomerase 5.6.2.1 GO:0003677,GO:0003917,GO:0005694,GO:0005737,GO:0006260,GO:0006265,GO:0046872 COG0551,L WP_017174596.1 UPI0002FC6606 UniRef100_A0A8X8GSI2,UniRef50_Q9CG80,UniRef90_Q5HPU2 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 74851 75723 . - . GCA_005502385.1_01026_gene GCA_005502385.1_01026 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNDFILLKMRWIGYTTQHIHHLLNVFPKFFNVNEHDQFEMINEWESLYLKKKRFTQLTEISYDYIQTQLSRYQVNYVTSFSSQYPSLLKTIYDYPFILFYRGNIHLLSSTYTLGVVGSREATNYSKCALDYLFPHFINIPLTIVSGLAKGADSIAHQFALKHHLPTIAVLGFGHLNHYPKETRKLRNIIEETGLVISEYPPLTKINKYQFPERNRLISGLSRGVLITEAKIKSGSQITIDCALDQNRNVYVLPGSMFNPLTKGNLLRAQEGAMIVSEAEDILYDYRFLND . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 74851 75723 . - . GCA_005502385.1_01026_mRNA GCA_005502385.1_01026 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNDFILLKMRWIGYTTQHIHHLLNVFPKFFNVNEHDQFEMINEWESLYLKKKRFTQLTEISYDYIQTQLSRYQVNYVTSFSSQYPSLLKTIYDYPFILFYRGNIHLLSSTYTLGVVGSREATNYSKCALDYLFPHFINIPLTIVSGLAKGADSIAHQFALKHHLPTIAVLGFGHLNHYPKETRKLRNIIEETGLVISEYPPLTKINKYQFPERNRLISGLSRGVLITEAKIKSGSQITIDCALDQNRNVYVLPGSMFNPLTKGNLLRAQEGAMIVSEAEDILYDYRFLND . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 74851 75723 . - 0 GCA_005502385.1_01026 GCA_005502385.1_01026_gene,GCA_005502385.1_01026_mRNA GCA_005502385.1_01026 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNDFILLKMRWIGYTTQHIHHLLNVFPKFFNVNEHDQFEMINEWESLYLKKKRFTQLTEISYDYIQTQLSRYQVNYVTSFSSQYPSLLKTIYDYPFILFYRGNIHLLSSTYTLGVVGSREATNYSKCALDYLFPHFINIPLTIVSGLAKGADSIAHQFALKHHLPTIAVLGFGHLNHYPKETRKLRNIIEETGLVISEYPPLTKINKYQFPERNRLISGLSRGVLITEAKIKSGSQITIDCALDQNRNVYVLPGSMFNPLTKGNLLRAQEGAMIVSEAEDILYDYRFLND persistent 290 dprA DNA-processing protein DprA GO:0009294 WP_019835580.1 UPI0003807BB8 UniRef100_A0A3S7GT41,UniRef50_A0A140HKN1,UniRef90_A0A974L0C4 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 75981 76886 . - . GCA_005502385.1_01027_gene GCA_005502385.1_01027 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGVFIDKNTKVMVQGITGSTALFHTKQMLDYGTQIVAGVTPGKGGQVVEGVPVYNTVAEAKKETGANVSVVYVPAPFAADSILEAADAELDMVICITEHIPVVDMIKVKRYLDGRKTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDEETKAVVMIGEIGGTAEEEAAEWVKANMTKPVVGFVGGQTAPPGKRMGHAGAIISGGKGTAAEKIKTLNECGVKTADTPSEIGTTLIEAAKEAGIYEELLTVK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 75981 76886 . - . GCA_005502385.1_01027_mRNA GCA_005502385.1_01027 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGVFIDKNTKVMVQGITGSTALFHTKQMLDYGTQIVAGVTPGKGGQVVEGVPVYNTVAEAKKETGANVSVVYVPAPFAADSILEAADAELDMVICITEHIPVVDMIKVKRYLDGRKTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDEETKAVVMIGEIGGTAEEEAAEWVKANMTKPVVGFVGGQTAPPGKRMGHAGAIISGGKGTAAEKIKTLNECGVKTADTPSEIGTTLIEAAKEAGIYEELLTVK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 75981 76886 . - 0 GCA_005502385.1_01027 GCA_005502385.1_01027_gene,GCA_005502385.1_01027_mRNA GCA_005502385.1_01027 Succinate--CoA ligase [ADP-forming] subunit alpha GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGVFIDKNTKVMVQGITGSTALFHTKQMLDYGTQIVAGVTPGKGGQVVEGVPVYNTVAEAKKETGANVSVVYVPAPFAADSILEAADAELDMVICITEHIPVVDMIKVKRYLDGRKTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDEETKAVVMIGEIGGTAEEEAAEWVKANMTKPVVGFVGGQTAPPGKRMGHAGAIISGGKGTAAEKIKTLNECGVKTADTPSEIGTTLIEAAKEAGIYEELLTVK persistent 301 sucD succinate--CoA ligase subunit alpha 6.2.1.5 GO:0003824 C,COG0074 WP_019835581.1 UPI000361170E UniRef100_UPI000361170E,UniRef50_P80865,UniRef90_A0A380FEU0 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 76908 78074 . - . GCA_005502385.1_01028_gene GCA_005502385.1_01028 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNIHEYQGKEIFRAMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEEGCDIQKEYYVGFVIDRATDRITLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLFSLYNVFVEKDCSIVEINPLVTTGDGDVLALDAKLNFDDNALFRHKDILELRDLEEEDPKEIQASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGTPANFLDVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLEGTNVKRGKEILNESGLAIEPAATMAEGAQQIVKLVKEA . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 76908 78074 . - . GCA_005502385.1_01028_mRNA GCA_005502385.1_01028 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNIHEYQGKEIFRAMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEEGCDIQKEYYVGFVIDRATDRITLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLFSLYNVFVEKDCSIVEINPLVTTGDGDVLALDAKLNFDDNALFRHKDILELRDLEEEDPKEIQASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGTPANFLDVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLEGTNVKRGKEILNESGLAIEPAATMAEGAQQIVKLVKEA . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 76908 78074 . - 0 GCA_005502385.1_01028 GCA_005502385.1_01028_gene,GCA_005502385.1_01028_mRNA GCA_005502385.1_01028 Succinate--CoA ligase [ADP-forming] subunit beta GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNIHEYQGKEIFRAMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEEGCDIQKEYYVGFVIDRATDRITLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLFSLYNVFVEKDCSIVEINPLVTTGDGDVLALDAKLNFDDNALFRHKDILELRDLEEEDPKEIQASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGTPANFLDVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLEGTNVKRGKEILNESGLAIEPAATMAEGAQQIVKLVKEA persistent 388 sucC ADP-forming succinate--CoA ligase subunit beta 6.2.1.5 GO:0000287,GO:0003824,GO:0004775,GO:0004776,GO:0005524,GO:0005829,GO:0006099,GO:0006104,GO:0042709,GO:0046872 C,COG0045 WP_137689512.1 UPI0010F4CE18 UniRef100_UPI0010F4CE18,UniRef50_Q8UC60,UniRef90_B9DPG0 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 78201 78968 . - . GCA_005502385.1_01029_gene GCA_005502385.1_01029 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPQTIKEIKALLDTIDSIEALEQHELMSDTRKGVQQNIVRRRKQLLKDQETREHYQQMNKYENEILKDNPNALICGIDEVGRGPLAGPVVACAVILNKEHQYLGLDDSKKVSATKRKILNEQLKEGVYDYAYGIASAEEIDKFNIYNATKLAMERAINQLTQQPNHLLIDAMTLDNAIPQTSIIKGDAKSVSIAAASIMAKEYRDGLMAEVALKYPGYDFEKNVGYGTKSHLQGLKQLGITPYHRKTFEPVKSMI . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 78201 78968 . - . GCA_005502385.1_01029_mRNA GCA_005502385.1_01029 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPQTIKEIKALLDTIDSIEALEQHELMSDTRKGVQQNIVRRRKQLLKDQETREHYQQMNKYENEILKDNPNALICGIDEVGRGPLAGPVVACAVILNKEHQYLGLDDSKKVSATKRKILNEQLKEGVYDYAYGIASAEEIDKFNIYNATKLAMERAINQLTQQPNHLLIDAMTLDNAIPQTSIIKGDAKSVSIAAASIMAKEYRDGLMAEVALKYPGYDFEKNVGYGTKSHLQGLKQLGITPYHRKTFEPVKSMI . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 78201 78968 . - 0 GCA_005502385.1_01029 GCA_005502385.1_01029_gene,GCA_005502385.1_01029_mRNA GCA_005502385.1_01029 Ribonuclease HII GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPQTIKEIKALLDTIDSIEALEQHELMSDTRKGVQQNIVRRRKQLLKDQETREHYQQMNKYENEILKDNPNALICGIDEVGRGPLAGPVVACAVILNKEHQYLGLDDSKKVSATKRKILNEQLKEGVYDYAYGIASAEEIDKFNIYNATKLAMERAINQLTQQPNHLLIDAMTLDNAIPQTSIIKGDAKSVSIAAASIMAKEYRDGLMAEVALKYPGYDFEKNVGYGTKSHLQGLKQLGITPYHRKTFEPVKSMI persistent 255 ribonuclease HII 3.1.26.4 GO:0003723,GO:0004523 WP_049379251.1 UPI00066B9B6A UniRef100_UPI00066B9B6A,UniRef50_Q6GHJ1,UniRef90_A0A3S7GT39 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 78952 79836 . - . GCA_005502385.1_01030_gene GCA_005502385.1_01030 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVIQWYPGHMAKAKREVTEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKKDMSNLNEMQKWEHFFTDKGFYPVAVDAKHGKNLKGVEYAAIEATKEKFEKEKAKGLKPRAIRAMIVGIPNVGKSTLINKLAKKNIAQTGNKPGVTKQQQWIKVGKALQLLDTPGILWPKFEDETVGKKLSLTGAIKDSIVHLDEVAIYGLHFLIKHDIEGLKNHYNIDVETDAEILEWFDAIGRRRGLLQKGNEVDYEAVIELIINDVRNAKIGTYCFDIYSEMKGDLDYASNN . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 78952 79836 . - . GCA_005502385.1_01030_mRNA GCA_005502385.1_01030 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVIQWYPGHMAKAKREVTEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKKDMSNLNEMQKWEHFFTDKGFYPVAVDAKHGKNLKGVEYAAIEATKEKFEKEKAKGLKPRAIRAMIVGIPNVGKSTLINKLAKKNIAQTGNKPGVTKQQQWIKVGKALQLLDTPGILWPKFEDETVGKKLSLTGAIKDSIVHLDEVAIYGLHFLIKHDIEGLKNHYNIDVETDAEILEWFDAIGRRRGLLQKGNEVDYEAVIELIINDVRNAKIGTYCFDIYSEMKGDLDYASNN . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 78952 79836 . - 0 GCA_005502385.1_01030 GCA_005502385.1_01030_gene,GCA_005502385.1_01030_mRNA GCA_005502385.1_01030 Ribosome biogenesis GTPase A GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVIQWYPGHMAKAKREVTEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKKDMSNLNEMQKWEHFFTDKGFYPVAVDAKHGKNLKGVEYAAIEATKEKFEKEKAKGLKPRAIRAMIVGIPNVGKSTLINKLAKKNIAQTGNKPGVTKQQQWIKVGKALQLLDTPGILWPKFEDETVGKKLSLTGAIKDSIVHLDEVAIYGLHFLIKHDIEGLKNHYNIDVETDAEILEWFDAIGRRRGLLQKGNEVDYEAVIELIINDVRNAKIGTYCFDIYSEMKGDLDYASNN persistent 294 ylqF ribosome biogenesis GTPase YlqF GO:0003924,GO:0005525,GO:0005737,GO:0042254 WP_017174591.1 UPI000306CE30 UniRef100_A0A3S7GVY3,UniRef50_A0A3G6UNR5,UniRef90_A0A3S7GVY3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 80092 82698 . + . GCA_005502385.1_01031_gene GCA_005502385.1_01031 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKFFTYLGLFIALSIIGHSYVIYRFIHDGILFTGPNDGMEQMVPIQMYLFDKWSSGNLFYSTDFGLGGDFFTDLSYYFSTNILFIINVVFIALIKIFIPLHTHNVLFWMINALIMSMIKAMIAMYCTYLYSKYISNNKWLSLVVAFLFVMSPLYYRFTVYWPFFSDVFVWMPLLLLSIERVLQKQKFGLFIVTVSLILINNFYFAYYLCLIGAGYILIRIIFRHPKDILSRSKAFLTLIISALLGLGNSLFIFFHGAQSFLNNRRVPFSGAVDTFEKLDINTNIFFDNYLIVLLFITIQALLSFKLYKHYYYRLFAILTFVFIIFSFIPFIDQVFNGFSAPQKRWHFILAFNSTLLIGLFLKYFKTLTTKSYLISNIIAELVIFISAMIYHKFLAWFILVPIVSLIGLMVLIIKDRTYRFKLSYLYSVSIILLSILVSIVFIKNQIYYKDHTDRGNTFYINSSLYSSDLQRALVQEMNQNKHEDERIDWRVNEQDNTPMYQHFKGLSLYSSIFHYNILDYYYDALKINLAEESLSRYQSTNGRQNIASLFSVRYMMLKNYQNNLPSYFKKIKSSGQYGIYENTLNLPSVKVTDSIYNSKKLTTAIDREHAMLKGVILNNEGTSYKAKAPNLLNQSSLSYKNLKHLNGNVYKVIGDKGGTLTIHLPQSLRQKYDDFYVTMKIKRGNPDSNYTVSVNNYANHRLFNNSTYRTGIDTQLYRTQPDNKGNINITLSPKGTFYLNLQQLNGENYKILKQMHKKADFNNKYKDIKNGVEVNLAKHDKGIASINIPYREGMQAYVDGHRIKPMKVNYMMTGVPVNSSAKKIIIKYQPPYWNTMILISLISIVISVVFVRFVNTKKRKLRKNIDQ . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 80092 82698 . + . GCA_005502385.1_01031_mRNA GCA_005502385.1_01031 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKFFTYLGLFIALSIIGHSYVIYRFIHDGILFTGPNDGMEQMVPIQMYLFDKWSSGNLFYSTDFGLGGDFFTDLSYYFSTNILFIINVVFIALIKIFIPLHTHNVLFWMINALIMSMIKAMIAMYCTYLYSKYISNNKWLSLVVAFLFVMSPLYYRFTVYWPFFSDVFVWMPLLLLSIERVLQKQKFGLFIVTVSLILINNFYFAYYLCLIGAGYILIRIIFRHPKDILSRSKAFLTLIISALLGLGNSLFIFFHGAQSFLNNRRVPFSGAVDTFEKLDINTNIFFDNYLIVLLFITIQALLSFKLYKHYYYRLFAILTFVFIIFSFIPFIDQVFNGFSAPQKRWHFILAFNSTLLIGLFLKYFKTLTTKSYLISNIIAELVIFISAMIYHKFLAWFILVPIVSLIGLMVLIIKDRTYRFKLSYLYSVSIILLSILVSIVFIKNQIYYKDHTDRGNTFYINSSLYSSDLQRALVQEMNQNKHEDERIDWRVNEQDNTPMYQHFKGLSLYSSIFHYNILDYYYDALKINLAEESLSRYQSTNGRQNIASLFSVRYMMLKNYQNNLPSYFKKIKSSGQYGIYENTLNLPSVKVTDSIYNSKKLTTAIDREHAMLKGVILNNEGTSYKAKAPNLLNQSSLSYKNLKHLNGNVYKVIGDKGGTLTIHLPQSLRQKYDDFYVTMKIKRGNPDSNYTVSVNNYANHRLFNNSTYRTGIDTQLYRTQPDNKGNINITLSPKGTFYLNLQQLNGENYKILKQMHKKADFNNKYKDIKNGVEVNLAKHDKGIASINIPYREGMQAYVDGHRIKPMKVNYMMTGVPVNSSAKKIIIKYQPPYWNTMILISLISIVISVVFVRFVNTKKRKLRKNIDQ . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 80092 82698 . + 0 GCA_005502385.1_01031 GCA_005502385.1_01031_gene,GCA_005502385.1_01031_mRNA GCA_005502385.1_01031 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKFFTYLGLFIALSIIGHSYVIYRFIHDGILFTGPNDGMEQMVPIQMYLFDKWSSGNLFYSTDFGLGGDFFTDLSYYFSTNILFIINVVFIALIKIFIPLHTHNVLFWMINALIMSMIKAMIAMYCTYLYSKYISNNKWLSLVVAFLFVMSPLYYRFTVYWPFFSDVFVWMPLLLLSIERVLQKQKFGLFIVTVSLILINNFYFAYYLCLIGAGYILIRIIFRHPKDILSRSKAFLTLIISALLGLGNSLFIFFHGAQSFLNNRRVPFSGAVDTFEKLDINTNIFFDNYLIVLLFITIQALLSFKLYKHYYYRLFAILTFVFIIFSFIPFIDQVFNGFSAPQKRWHFILAFNSTLLIGLFLKYFKTLTTKSYLISNIIAELVIFISAMIYHKFLAWFILVPIVSLIGLMVLIIKDRTYRFKLSYLYSVSIILLSILVSIVFIKNQIYYKDHTDRGNTFYINSSLYSSDLQRALVQEMNQNKHEDERIDWRVNEQDNTPMYQHFKGLSLYSSIFHYNILDYYYDALKINLAEESLSRYQSTNGRQNIASLFSVRYMMLKNYQNNLPSYFKKIKSSGQYGIYENTLNLPSVKVTDSIYNSKKLTTAIDREHAMLKGVILNNEGTSYKAKAPNLLNQSSLSYKNLKHLNGNVYKVIGDKGGTLTIHLPQSLRQKYDDFYVTMKIKRGNPDSNYTVSVNNYANHRLFNNSTYRTGIDTQLYRTQPDNKGNINITLSPKGTFYLNLQQLNGENYKILKQMHKKADFNNKYKDIKNGVEVNLAKHDKGIASINIPYREGMQAYVDGHRIKPMKVNYMMTGVPVNSSAKKIIIKYQPPYWNTMILISLISIVISVVFVRFVNTKKRKLRKNIDQ persistent 868 yfhO YfhO family protein UniRef50_Q49X29,UniRef90_A0A974QNR5 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 82688 85312 . + . GCA_005502385.1_01032_gene GCA_005502385.1_01032 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MINKIRSNRLLTFLSIFIIANIISLAIYYPFIRDYFKEGFVFSGSGDGFRQMMPFQMYLYEHYSKFKGAYDQSFGLGGDYIKGLAYYYSLSPIMWINFFIIWVSHFLFHWQTSHIAFWATNQLIIAYARTIITIIVVFYYLKWLKLKTAPLLIATILYGASTLVLYYNYTWSFYGDLLILLPLSLWGMERFFQKRRIGLFIFSVALTLFSNFYFSYYQAIVLGIYFILRVIFKYRCDIVSRWEKFYLLVIGAILALLSSILGFYTGVSSFLNNDRAQNDDFNITLFTDLTQSKYHIFSDGFYITVSIIALMALFTFKLYRHYYYKIFAIITWFLLIGSLSQYFDSAFNGFSLPQRRWVYFLSISTSILIALYIQYLSELTLKQYLLVAIPVFIFGLYHYIFASAYVNWMIVPLFLIIVLTFVVWKKQWLYQPYILIAIVLLFFVQQIIMTHDSRARTIDPYATTTKTLTDSSYYNHKLAKKINNIKKQKDNKNPFHRIDYMSAYALNSPFIYHYNGISLYSSIFDGDILKYYDKEMQINMPVDKNSTYRYLGNRANLEAMWDVQDRFRHPNDLNMPYGFKKVDTINNGSDKLIHSENTINYPATHITNKIFNKHDLKSPLDREQAMLQGVVLDDDSIKANTSFTQNKNLLSKAYQSTNNATWKDKTHLNVEKNNGGITLTLPKTLANQYKDMYVEMDVELLAPDIEHSIGVNEYAQNRNMLSYKYRRFVTPVTMRVKASDQLKIRLTKGHYRLSIKGIYGEDYHTLKQASKSLKPVTISQFRSGYTFTKPKGTSGYLVVPIAYANGMHARVNGHDVDVKQANGIMTAIPVKKNDTHIELSYTPPHFYILLILSVIGIISSIIFSRYLKRKNQLK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 82688 85312 . + . GCA_005502385.1_01032_mRNA GCA_005502385.1_01032 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MINKIRSNRLLTFLSIFIIANIISLAIYYPFIRDYFKEGFVFSGSGDGFRQMMPFQMYLYEHYSKFKGAYDQSFGLGGDYIKGLAYYYSLSPIMWINFFIIWVSHFLFHWQTSHIAFWATNQLIIAYARTIITIIVVFYYLKWLKLKTAPLLIATILYGASTLVLYYNYTWSFYGDLLILLPLSLWGMERFFQKRRIGLFIFSVALTLFSNFYFSYYQAIVLGIYFILRVIFKYRCDIVSRWEKFYLLVIGAILALLSSILGFYTGVSSFLNNDRAQNDDFNITLFTDLTQSKYHIFSDGFYITVSIIALMALFTFKLYRHYYYKIFAIITWFLLIGSLSQYFDSAFNGFSLPQRRWVYFLSISTSILIALYIQYLSELTLKQYLLVAIPVFIFGLYHYIFASAYVNWMIVPLFLIIVLTFVVWKKQWLYQPYILIAIVLLFFVQQIIMTHDSRARTIDPYATTTKTLTDSSYYNHKLAKKINNIKKQKDNKNPFHRIDYMSAYALNSPFIYHYNGISLYSSIFDGDILKYYDKEMQINMPVDKNSTYRYLGNRANLEAMWDVQDRFRHPNDLNMPYGFKKVDTINNGSDKLIHSENTINYPATHITNKIFNKHDLKSPLDREQAMLQGVVLDDDSIKANTSFTQNKNLLSKAYQSTNNATWKDKTHLNVEKNNGGITLTLPKTLANQYKDMYVEMDVELLAPDIEHSIGVNEYAQNRNMLSYKYRRFVTPVTMRVKASDQLKIRLTKGHYRLSIKGIYGEDYHTLKQASKSLKPVTISQFRSGYTFTKPKGTSGYLVVPIAYANGMHARVNGHDVDVKQANGIMTAIPVKKNDTHIELSYTPPHFYILLILSVIGIISSIIFSRYLKRKNQLK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 82688 85312 . + 0 GCA_005502385.1_01032 GCA_005502385.1_01032_gene,GCA_005502385.1_01032_mRNA GCA_005502385.1_01032 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MINKIRSNRLLTFLSIFIIANIISLAIYYPFIRDYFKEGFVFSGSGDGFRQMMPFQMYLYEHYSKFKGAYDQSFGLGGDYIKGLAYYYSLSPIMWINFFIIWVSHFLFHWQTSHIAFWATNQLIIAYARTIITIIVVFYYLKWLKLKTAPLLIATILYGASTLVLYYNYTWSFYGDLLILLPLSLWGMERFFQKRRIGLFIFSVALTLFSNFYFSYYQAIVLGIYFILRVIFKYRCDIVSRWEKFYLLVIGAILALLSSILGFYTGVSSFLNNDRAQNDDFNITLFTDLTQSKYHIFSDGFYITVSIIALMALFTFKLYRHYYYKIFAIITWFLLIGSLSQYFDSAFNGFSLPQRRWVYFLSISTSILIALYIQYLSELTLKQYLLVAIPVFIFGLYHYIFASAYVNWMIVPLFLIIVLTFVVWKKQWLYQPYILIAIVLLFFVQQIIMTHDSRARTIDPYATTTKTLTDSSYYNHKLAKKINNIKKQKDNKNPFHRIDYMSAYALNSPFIYHYNGISLYSSIFDGDILKYYDKEMQINMPVDKNSTYRYLGNRANLEAMWDVQDRFRHPNDLNMPYGFKKVDTINNGSDKLIHSENTINYPATHITNKIFNKHDLKSPLDREQAMLQGVVLDDDSIKANTSFTQNKNLLSKAYQSTNNATWKDKTHLNVEKNNGGITLTLPKTLANQYKDMYVEMDVELLAPDIEHSIGVNEYAQNRNMLSYKYRRFVTPVTMRVKASDQLKIRLTKGHYRLSIKGIYGEDYHTLKQASKSLKPVTISQFRSGYTFTKPKGTSGYLVVPIAYANGMHARVNGHDVDVKQANGIMTAIPVKKNDTHIELSYTPPHFYILLILSVIGIISSIIFSRYLKRKNQLK persistent 874 yfhO YfhO family protein WP_061815415.1 UPI0007656289 UniRef100_UPI0007656289,UniRef50_A0A2A1KBP9,UniRef90_A0A974KY55 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 85374 85598 . - . GCA_005502385.1_01033_gene GCA_005502385.1_01033 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 85374 85598 . - . GCA_005502385.1_01033_mRNA GCA_005502385.1_01033 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 . . . . . . . GCA_005502385.1|SCOV01000002.1 Infernal:001001 misc_RNA 85374 85598 71.8 - . GCA_005502385.1_01033 GCA_005502385.1_01033_gene,GCA_005502385.1_01033_mRNA GCA_005502385.1_01033 tsr24 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 85586 86095 . + . GCA_005502385.1_01034_gene GCA_005502385.1_01034 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MYKDYNMIHLTLPMVISVLIPIHDISRHVNDIVETNTKTEFICPNNKRLVFKKYTYHHDKYGFKRDFKLYECDDDSECPLKHPCMNFNSKTNKKVMKNYNWEYFKAQINKKLSKTKTIYSQRKIDVASVFRFIKAILSSTRMSVRGINKDKRELGFELMTLNLRKVTAQ . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 85586 86095 . + . GCA_005502385.1_01034_mRNA GCA_005502385.1_01034 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MYKDYNMIHLTLPMVISVLIPIHDISRHVNDIVETNTKTEFICPNNKRLVFKKYTYHHDKYGFKRDFKLYECDDDSECPLKHPCMNFNSKTNKKVMKNYNWEYFKAQINKKLSKTKTIYSQRKIDVASVFRFIKAILSSTRMSVRGINKDKRELGFELMTLNLRKVTAQ . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 85586 86095 . + 0 GCA_005502385.1_01034 GCA_005502385.1_01034_gene,GCA_005502385.1_01034_mRNA GCA_005502385.1_01034 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MYKDYNMIHLTLPMVISVLIPIHDISRHVNDIVETNTKTEFICPNNKRLVFKKYTYHHDKYGFKRDFKLYECDDDSECPLKHPCMNFNSKTNKKVMKNYNWEYFKAQINKKLSKTKTIYSQRKIDVASVFRFIKAILSSTRMSVRGINKDKRELGFELMTLNLRKVTAQ shell 169 transposase UniRef50_UPI001C4E9FBD,UniRef90_UPI0008A1BE97 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 86251 86601 . - . GCA_005502385.1_01035_gene GCA_005502385.1_01035 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSNHKLIEAVTKSQLRTDLPTFRTGDTLRVHVRIVEGSRERIQVFEGVVIKRRGGGISETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYLRSLRGKAARIQEIR . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 86251 86601 . - . GCA_005502385.1_01035_mRNA GCA_005502385.1_01035 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSNHKLIEAVTKSQLRTDLPTFRTGDTLRVHVRIVEGSRERIQVFEGVVIKRRGGGISETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYLRSLRGKAARIQEIR . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 86251 86601 . - 0 GCA_005502385.1_01035 GCA_005502385.1_01035_gene,GCA_005502385.1_01035_mRNA GCA_005502385.1_01035 50S ribosomal protein L19 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSNHKLIEAVTKSQLRTDLPTFRTGDTLRVHVRIVEGSRERIQVFEGVVIKRRGGGISETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYLRSLRGKAARIQEIR persistent 116 rplS 50S ribosomal protein L19 GO:0000311,GO:0003735,GO:0006412,GO:0022625 COG0335,J WP_002448843.1 UPI00019FC7CB UniRef100_A0A1L8Y9T7,UniRef50_Q8EWU9,UniRef90_Q5HPV0 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 86620 86662 . - . GCA_005502385.1_01036_gene GCA_005502385.1_01036 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 86620 86662 . - . GCA_005502385.1_01036_mRNA GCA_005502385.1_01036 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 . . . . . . . GCA_005502385.1|SCOV01000002.1 Infernal:001001 misc_RNA 86620 86662 49.7 - . GCA_005502385.1_01036 GCA_005502385.1_01036_gene,GCA_005502385.1_01036_mRNA GCA_005502385.1_01036 L19_leader GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 86706 87443 . - . GCA_005502385.1_01037_gene GCA_005502385.1_01037 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKIDYLTLFPEMFDGVLNHSILKRAQDKNIIEVNTVNFRDYAENKHNQVDDYPYGGGQGMVLKPEPVFNAMKDLKRTDKTRVILMCPQGRPFSQAIAEELSEAEHIVFICGHYEGYDERIRENLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNEQSHQDDSFSDGLLEFPQYTRPREYKGMTVPDVLLSGNHANIEKWRHEQKLIRTLHKRPDLLEKYQLSDKDKEFLESYKNQLKNN . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 86706 87443 . - . GCA_005502385.1_01037_mRNA GCA_005502385.1_01037 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKIDYLTLFPEMFDGVLNHSILKRAQDKNIIEVNTVNFRDYAENKHNQVDDYPYGGGQGMVLKPEPVFNAMKDLKRTDKTRVILMCPQGRPFSQAIAEELSEAEHIVFICGHYEGYDERIRENLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNEQSHQDDSFSDGLLEFPQYTRPREYKGMTVPDVLLSGNHANIEKWRHEQKLIRTLHKRPDLLEKYQLSDKDKEFLESYKNQLKNN . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 86706 87443 . - 0 GCA_005502385.1_01037 GCA_005502385.1_01037_gene,GCA_005502385.1_01037_mRNA GCA_005502385.1_01037 tRNA (guanine-N(1)-)-methyltransferase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKIDYLTLFPEMFDGVLNHSILKRAQDKNIIEVNTVNFRDYAENKHNQVDDYPYGGGQGMVLKPEPVFNAMKDLKRTDKTRVILMCPQGRPFSQAIAEELSEAEHIVFICGHYEGYDERIRENLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNEQSHQDDSFSDGLLEFPQYTRPREYKGMTVPDVLLSGNHANIEKWRHEQKLIRTLHKRPDLLEKYQLSDKDKEFLESYKNQLKNN persistent 245 trmD tRNA (guanosine(37)-N1)-methyltransferase TrmD 2.1.1.228 GO:0008033,GO:0052906 WP_017174587.1 UPI0002EA7291 UniRef100_A0A3S7GWL8,UniRef50_Q6GHJ5,UniRef90_A0A3S7GWL8 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 87443 87943 . - . GCA_005502385.1_01038_gene GCA_005502385.1_01038 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQVEVGQIVNTHGIKGEVKVKSNSDFTDTRFQPGEVLIVNHHHNEIEMTITSYRIHKGFHMLKFEGINNINDVEQYKGDYLFQERDHEDIELNENEFYYSDIIGCTVFNNDTPIGRVINIFETGANDVWVVKGDKEYLIPYIADVVKEVDVEHKTIRITPMEGLLE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 87443 87943 . - . GCA_005502385.1_01038_mRNA GCA_005502385.1_01038 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQVEVGQIVNTHGIKGEVKVKSNSDFTDTRFQPGEVLIVNHHHNEIEMTITSYRIHKGFHMLKFEGINNINDVEQYKGDYLFQERDHEDIELNENEFYYSDIIGCTVFNNDTPIGRVINIFETGANDVWVVKGDKEYLIPYIADVVKEVDVEHKTIRITPMEGLLE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 87443 87943 . - 0 GCA_005502385.1_01038 GCA_005502385.1_01038_gene,GCA_005502385.1_01038_mRNA GCA_005502385.1_01038 Ribosome maturation factor RimM GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQVEVGQIVNTHGIKGEVKVKSNSDFTDTRFQPGEVLIVNHHHNEIEMTITSYRIHKGFHMLKFEGINNINDVEQYKGDYLFQERDHEDIELNENEFYYSDIIGCTVFNNDTPIGRVINIFETGANDVWVVKGDKEYLIPYIADVVKEVDVEHKTIRITPMEGLLE persistent 166 rimM ribosome maturation factor RimM GO:0005840,GO:0006364,GO:0043022 WP_017174586.1 UPI0002E1A543 UniRef100_A0A4Q9WTC9,UniRef50_Q2FZ44,UniRef90_A0AAE5MZ41 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 88075 88350 . - . GCA_005502385.1_01039_gene GCA_005502385.1_01039 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQIGTYNPASVNAPEVKIDEELALKWLKDGAKPTDTVHNILSKQGILKTFDEQKRSK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 88075 88350 . - . GCA_005502385.1_01039_mRNA GCA_005502385.1_01039 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQIGTYNPASVNAPEVKIDEELALKWLKDGAKPTDTVHNILSKQGILKTFDEQKRSK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 88075 88350 . - 0 GCA_005502385.1_01039 GCA_005502385.1_01039_gene,GCA_005502385.1_01039_mRNA GCA_005502385.1_01039 30S ribosomal protein S16 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQIGTYNPASVNAPEVKIDEELALKWLKDGAKPTDTVHNILSKQGILKTFDEQKRSK persistent 91 rpsP 30S ribosomal protein S16 GO:0000314,GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0022627 COG0228,J WP_002448807.1 UPI00019FC7CE UniRef100_A0A1L8Y9X6,UniRef50_Q2FZ45,UniRef90_Q5HPV3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 88612 89982 . - . GCA_005502385.1_01040_gene GCA_005502385.1_01040 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAFEGLSDRLQATMQKIRGKGKVTEADIKTMMREVRLALLEADVNFKVVKDFVKTVSERALGSDVMQSLTPGQQVIKIVQDELTQLMGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQLDVPVYSEGDQVKPQQIVDNALRYAKEEHLDFVIIDTAGRLHIDETLMNELTDVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVTGVTLTKLDGDTRGGAALSIRAVTHKPIKFVGMSEKMDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPNERQDPAILNVSRKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGNGRKGKKGKRSQMENMLKGMNLPF . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 88612 89982 . - . GCA_005502385.1_01040_mRNA GCA_005502385.1_01040 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAFEGLSDRLQATMQKIRGKGKVTEADIKTMMREVRLALLEADVNFKVVKDFVKTVSERALGSDVMQSLTPGQQVIKIVQDELTQLMGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQLDVPVYSEGDQVKPQQIVDNALRYAKEEHLDFVIIDTAGRLHIDETLMNELTDVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVTGVTLTKLDGDTRGGAALSIRAVTHKPIKFVGMSEKMDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPNERQDPAILNVSRKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGNGRKGKKGKRSQMENMLKGMNLPF . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 88612 89982 . - 0 GCA_005502385.1_01040 GCA_005502385.1_01040_gene,GCA_005502385.1_01040_mRNA GCA_005502385.1_01040 Signal recognition particle protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAFEGLSDRLQATMQKIRGKGKVTEADIKTMMREVRLALLEADVNFKVVKDFVKTVSERALGSDVMQSLTPGQQVIKIVQDELTQLMGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQLDVPVYSEGDQVKPQQIVDNALRYAKEEHLDFVIIDTAGRLHIDETLMNELTDVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVTGVTLTKLDGDTRGGAALSIRAVTHKPIKFVGMSEKMDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPNERQDPAILNVSRKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGNGRKGKKGKRSQMENMLKGMNLPF persistent 456 ffh signal recognition particle protein GO:0003924,GO:0005048,GO:0005525,GO:0009306,GO:0048501 COG0541,U WP_019835642.1 UPI00036780E1 UniRef100_UPI00036780E1,UniRef50_P37105,UniRef90_A0A7Z7QZ67 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 90003 90335 . - . GCA_005502385.1_01041_gene GCA_005502385.1_01041 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGKNDLVKTLRMNYLFDFYHSLLTEKQKNYLELFYLNDYSLSEIAETFKVSRQAVYDNIRRTGDLVEDYETKLKLYEKFEQRQMIYNEMKQSIHDTKKLEHLIQKLEELE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 90003 90335 . - . GCA_005502385.1_01041_mRNA GCA_005502385.1_01041 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGKNDLVKTLRMNYLFDFYHSLLTEKQKNYLELFYLNDYSLSEIAETFKVSRQAVYDNIRRTGDLVEDYETKLKLYEKFEQRQMIYNEMKQSIHDTKKLEHLIQKLEELE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 90003 90335 . - 0 GCA_005502385.1_01041 GCA_005502385.1_01041_gene,GCA_005502385.1_01041_mRNA GCA_005502385.1_01041 hypothetical protein UPF0122 protein SAV1236 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGKNDLVKTLRMNYLFDFYHSLLTEKQKNYLELFYLNDYSLSEIAETFKVSRQAVYDNIRRTGDLVEDYETKLKLYEKFEQRQMIYNEMKQSIHDTKKLEHLIQKLEELE persistent 110 putative DNA-binding protein WP_017174585.1 UPI0002EDD16D UniRef100_A0A4Q9WSJ2,UniRef50_Q2FZ47,UniRef90_A0A974KYA2 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 90322 91551 . - . GCA_005502385.1_01042_gene GCA_005502385.1_01042 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSFFKRLKDKFSTKSTEDIEKELTEDEELDQPSTKDNEQENEEPAPKKKKPRKLSEADFDEDGLISIEDFEEIEAQKMGAKFKAGLEKSRENFQEQLNNLIARYRTVDEDFFEALEEMLITADVGFNTVMQLTDELRTEAQRRNIKETEGLREVIVEKIVEIYHQEDDHSEAMNIEDGRLNVILMVGVNGVGKTTTIGKLAHRYKMEGKKVMLAAGDTFRAGAIEQLQVWGDRVGVEVIRQSEGSDPAAVVYDAINAAKNKDVDILICDTAGRLQNKSNLMQELDKMKRVISRAVPDAPHEALLCLDATTGQNALSQARSFKEVTNVSGIVLTKLDGTAKGGIVLAIRNELHIPVKYVGLGEKLDDLQPFNPESYVYGLFADMIEQNDNIPDEMQSLTDNNEEHQNGEK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 90322 91551 . - . GCA_005502385.1_01042_mRNA GCA_005502385.1_01042 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSFFKRLKDKFSTKSTEDIEKELTEDEELDQPSTKDNEQENEEPAPKKKKPRKLSEADFDEDGLISIEDFEEIEAQKMGAKFKAGLEKSRENFQEQLNNLIARYRTVDEDFFEALEEMLITADVGFNTVMQLTDELRTEAQRRNIKETEGLREVIVEKIVEIYHQEDDHSEAMNIEDGRLNVILMVGVNGVGKTTTIGKLAHRYKMEGKKVMLAAGDTFRAGAIEQLQVWGDRVGVEVIRQSEGSDPAAVVYDAINAAKNKDVDILICDTAGRLQNKSNLMQELDKMKRVISRAVPDAPHEALLCLDATTGQNALSQARSFKEVTNVSGIVLTKLDGTAKGGIVLAIRNELHIPVKYVGLGEKLDDLQPFNPESYVYGLFADMIEQNDNIPDEMQSLTDNNEEHQNGEK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 90322 91551 . - 0 GCA_005502385.1_01042 GCA_005502385.1_01042_gene,GCA_005502385.1_01042_mRNA GCA_005502385.1_01042 Signal recognition particle receptor FtsY GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSFFKRLKDKFSTKSTEDIEKELTEDEELDQPSTKDNEQENEEPAPKKKKPRKLSEADFDEDGLISIEDFEEIEAQKMGAKFKAGLEKSRENFQEQLNNLIARYRTVDEDFFEALEEMLITADVGFNTVMQLTDELRTEAQRRNIKETEGLREVIVEKIVEIYHQEDDHSEAMNIEDGRLNVILMVGVNGVGKTTTIGKLAHRYKMEGKKVMLAAGDTFRAGAIEQLQVWGDRVGVEVIRQSEGSDPAAVVYDAINAAKNKDVDILICDTAGRLQNKSNLMQELDKMKRVISRAVPDAPHEALLCLDATTGQNALSQARSFKEVTNVSGIVLTKLDGTAKGGIVLAIRNELHIPVKYVGLGEKLDDLQPFNPESYVYGLFADMIEQNDNIPDEMQSLTDNNEEHQNGEK persistent 409 ftsY signal recognition particle-docking protein FtsY GO:0003924,GO:0005047,GO:0006614,GO:0009306 COG0552,U WP_017174584.1 UPI000300DE24 UniRef100_A0A4Q9WUN9,UniRef50_Q2FZ48,UniRef90_A0A640MUE6 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 91548 95117 . - . GCA_005502385.1_01043_gene GCA_005502385.1_01043 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVYLKSIDTVGFKSFADRTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGSKMEDIIFSGAEHRQAQNYAEVQLKLDNSTRELQIEADDVIVTRRLYRSGESEYYLNNDRARLRDITELFLDSGLGKEAFSIISQGRVDEILNAKPVDRRQIIEESAGVLKYKKRKTESLQKLGHTEDNLSRVEDILYDLEGRVEPLKAEASIAKEYLQLSKEMEHSDVVVTVHDINQYDEENRQLDERLNHLKSQQAEKEGQQAQLNQYLQKQKTQRQKLERDTDHTNIDLITTTEEYEKFIGKLNVLEERKRNQSETNARFEEELDNLQYELKNVQDERELSVEQVSKLKKQHQSLNKEIKQLESKLNLTDAQHDEKLETIKNEYYELMSEQSEVNNDIRFLERTIQENETKKTRLDARLIEVFDQLKHIQNDIHQTEQAHTTISQKMNITEKDMRDVEDRLSEAKRIEATYEDKLYQAYRYTDKMRVRMESLETQAEDYSYFFNGVKHILKAKENTLSGIHGAVAEVIKVPSKLTQAIETALGASLQHIIVNNEKDGRQAIKFLKQRGLGRATFLPLNVIRARSLSHHIQNVARNFDGFINIASEAVEVNQTYQAVIDNLMGTTIIVENLKIANELARAIQYKARIVTLEGDIVNPGGAMTGGGMRQSKSILAQKDELATMKTQLNDYEEKTKEFEQQLQKQKEKVETLSNKYVDLSQQYHQLKDTAHEETLTLDRLKKQETHIKSEHEEFEFEKNDGYQSEKSRHTLKQQQLRLSEIQEQLKQLENDIEVYSKLSKEGKENVSQVEKELNQKRSDVAVVKEKISHQTMSLERIDKQLAQINQQIIATKEKIELFNSDDMMGEKAFQQLQSSIQDKASQRDKLKQKLDTLKEQKDSINEDIEIHEYKLEQCHQDLLSIESFYQDIKAQQSKLDVLINHAMNHLNETYHLTLERARETYQSDVPIETLRKKVKLTKMSIEELGSVNVNAIEQFEELNERYTFLNEQRNDLREAKQTLEQIIDEMDQEVKDRFKATFFEVQDYFTTVFQSLFGGGHAKLELTDDDYLSAGVDIIVQPPGKKLQNLSLLSGGERALSAIALLFAILKVRSAPFVILDEVEAALDEANVIRYAQFLNDLSEKTQFIVITHRKGTMEYSDRLYGVTMQESGVSKLVSVNLNTIDEVMKEENA . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 91548 95117 . - . GCA_005502385.1_01043_mRNA GCA_005502385.1_01043 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVYLKSIDTVGFKSFADRTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGSKMEDIIFSGAEHRQAQNYAEVQLKLDNSTRELQIEADDVIVTRRLYRSGESEYYLNNDRARLRDITELFLDSGLGKEAFSIISQGRVDEILNAKPVDRRQIIEESAGVLKYKKRKTESLQKLGHTEDNLSRVEDILYDLEGRVEPLKAEASIAKEYLQLSKEMEHSDVVVTVHDINQYDEENRQLDERLNHLKSQQAEKEGQQAQLNQYLQKQKTQRQKLERDTDHTNIDLITTTEEYEKFIGKLNVLEERKRNQSETNARFEEELDNLQYELKNVQDERELSVEQVSKLKKQHQSLNKEIKQLESKLNLTDAQHDEKLETIKNEYYELMSEQSEVNNDIRFLERTIQENETKKTRLDARLIEVFDQLKHIQNDIHQTEQAHTTISQKMNITEKDMRDVEDRLSEAKRIEATYEDKLYQAYRYTDKMRVRMESLETQAEDYSYFFNGVKHILKAKENTLSGIHGAVAEVIKVPSKLTQAIETALGASLQHIIVNNEKDGRQAIKFLKQRGLGRATFLPLNVIRARSLSHHIQNVARNFDGFINIASEAVEVNQTYQAVIDNLMGTTIIVENLKIANELARAIQYKARIVTLEGDIVNPGGAMTGGGMRQSKSILAQKDELATMKTQLNDYEEKTKEFEQQLQKQKEKVETLSNKYVDLSQQYHQLKDTAHEETLTLDRLKKQETHIKSEHEEFEFEKNDGYQSEKSRHTLKQQQLRLSEIQEQLKQLENDIEVYSKLSKEGKENVSQVEKELNQKRSDVAVVKEKISHQTMSLERIDKQLAQINQQIIATKEKIELFNSDDMMGEKAFQQLQSSIQDKASQRDKLKQKLDTLKEQKDSINEDIEIHEYKLEQCHQDLLSIESFYQDIKAQQSKLDVLINHAMNHLNETYHLTLERARETYQSDVPIETLRKKVKLTKMSIEELGSVNVNAIEQFEELNERYTFLNEQRNDLREAKQTLEQIIDEMDQEVKDRFKATFFEVQDYFTTVFQSLFGGGHAKLELTDDDYLSAGVDIIVQPPGKKLQNLSLLSGGERALSAIALLFAILKVRSAPFVILDEVEAALDEANVIRYAQFLNDLSEKTQFIVITHRKGTMEYSDRLYGVTMQESGVSKLVSVNLNTIDEVMKEENA . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 91548 95117 . - 0 GCA_005502385.1_01043 GCA_005502385.1_01043_gene,GCA_005502385.1_01043_mRNA GCA_005502385.1_01043 Chromosome partition protein Smc GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVYLKSIDTVGFKSFADRTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGSKMEDIIFSGAEHRQAQNYAEVQLKLDNSTRELQIEADDVIVTRRLYRSGESEYYLNNDRARLRDITELFLDSGLGKEAFSIISQGRVDEILNAKPVDRRQIIEESAGVLKYKKRKTESLQKLGHTEDNLSRVEDILYDLEGRVEPLKAEASIAKEYLQLSKEMEHSDVVVTVHDINQYDEENRQLDERLNHLKSQQAEKEGQQAQLNQYLQKQKTQRQKLERDTDHTNIDLITTTEEYEKFIGKLNVLEERKRNQSETNARFEEELDNLQYELKNVQDERELSVEQVSKLKKQHQSLNKEIKQLESKLNLTDAQHDEKLETIKNEYYELMSEQSEVNNDIRFLERTIQENETKKTRLDARLIEVFDQLKHIQNDIHQTEQAHTTISQKMNITEKDMRDVEDRLSEAKRIEATYEDKLYQAYRYTDKMRVRMESLETQAEDYSYFFNGVKHILKAKENTLSGIHGAVAEVIKVPSKLTQAIETALGASLQHIIVNNEKDGRQAIKFLKQRGLGRATFLPLNVIRARSLSHHIQNVARNFDGFINIASEAVEVNQTYQAVIDNLMGTTIIVENLKIANELARAIQYKARIVTLEGDIVNPGGAMTGGGMRQSKSILAQKDELATMKTQLNDYEEKTKEFEQQLQKQKEKVETLSNKYVDLSQQYHQLKDTAHEETLTLDRLKKQETHIKSEHEEFEFEKNDGYQSEKSRHTLKQQQLRLSEIQEQLKQLENDIEVYSKLSKEGKENVSQVEKELNQKRSDVAVVKEKISHQTMSLERIDKQLAQINQQIIATKEKIELFNSDDMMGEKAFQQLQSSIQDKASQRDKLKQKLDTLKEQKDSINEDIEIHEYKLEQCHQDLLSIESFYQDIKAQQSKLDVLINHAMNHLNETYHLTLERARETYQSDVPIETLRKKVKLTKMSIEELGSVNVNAIEQFEELNERYTFLNEQRNDLREAKQTLEQIIDEMDQEVKDRFKATFFEVQDYFTTVFQSLFGGGHAKLELTDDDYLSAGVDIIVQPPGKKLQNLSLLSGGERALSAIALLFAILKVRSAPFVILDEVEAALDEANVIRYAQFLNDLSEKTQFIVITHRKGTMEYSDRLYGVTMQESGVSKLVSVNLNTIDEVMKEENA persistent 1189 smc chromosome segregation protein SMC GO:0005524,GO:0007059,GO:0030261 WP_019835643.1 UPI00037B08D6 UniRef100_UPI00037B08D6,UniRef50_A0A380G9C6,UniRef90_A0A3S7GVZ3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 95187 95918 . - . GCA_005502385.1_01044_gene GCA_005502385.1_01044 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MHPKQSEMIKDFQYQFDKKMKILGLSYTHLDVYQQAFSHSSFINDFNMDRLAHNERLEFLGDAVLELTVSRYLFDKYPNLPEGNLTKMRATIVCEPSLVIFANKIELNQLILLGKGEEKTGGRTRPSLVSDAFEAFIGALYLDQGLEVVWKFAQKVIFPYVEHNELIGVVDFKTQFQEYIHSQSKGDVTYHLIKEEGPAHHRLFTSEVILENKAIAKGQGRTKKESEQKAAESAYHKLRDENK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 95187 95918 . - . GCA_005502385.1_01044_mRNA GCA_005502385.1_01044 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MHPKQSEMIKDFQYQFDKKMKILGLSYTHLDVYQQAFSHSSFINDFNMDRLAHNERLEFLGDAVLELTVSRYLFDKYPNLPEGNLTKMRATIVCEPSLVIFANKIELNQLILLGKGEEKTGGRTRPSLVSDAFEAFIGALYLDQGLEVVWKFAQKVIFPYVEHNELIGVVDFKTQFQEYIHSQSKGDVTYHLIKEEGPAHHRLFTSEVILENKAIAKGQGRTKKESEQKAAESAYHKLRDENK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 95187 95918 . - 0 GCA_005502385.1_01044 GCA_005502385.1_01044_gene,GCA_005502385.1_01044_mRNA GCA_005502385.1_01044 Ribonuclease 3 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MHPKQSEMIKDFQYQFDKKMKILGLSYTHLDVYQQAFSHSSFINDFNMDRLAHNERLEFLGDAVLELTVSRYLFDKYPNLPEGNLTKMRATIVCEPSLVIFANKIELNQLILLGKGEEKTGGRTRPSLVSDAFEAFIGALYLDQGLEVVWKFAQKVIFPYVEHNELIGVVDFKTQFQEYIHSQSKGDVTYHLIKEEGPAHHRLFTSEVILENKAIAKGQGRTKKESEQKAAESAYHKLRDENK persistent 243 rnc ribonuclease III 3.1.26.3 GO:0003723,GO:0004525,GO:0006364,GO:0006396 WP_391556638.1 UPI003704A033 UniRef100_UPI0010F83A9C,UniRef50_Q2FZ50,UniRef90_A0A4Q9X1W6 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 96000 96233 . - . GCA_005502385.1_01045_gene GCA_005502385.1_01045 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKYINSLEK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 96000 96233 . - . GCA_005502385.1_01045_mRNA GCA_005502385.1_01045 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKYINSLEK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 96000 96233 . - 0 GCA_005502385.1_01045 GCA_005502385.1_01045_gene,GCA_005502385.1_01045_mRNA GCA_005502385.1_01045 Acyl carrier protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKYINSLEK persistent 77 acpP acyl carrier protein GO:0000035,GO:0000036,GO:0005829,GO:0006633,GO:0009245,GO:0016020 COG0236,I WP_001830184.1 UPI00000E5237 UniRef100_Q5HPV9,UniRef50_Q8R9W1,UniRef90_B9DPJ1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 96360 97094 . - . GCA_005502385.1_01046_gene GCA_005502385.1_01046 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTKSALVTGASRGIGRSIALQLAEDGFNVAVNYAGNKEKAEAVVKEIKEKGVESFAIQANVAEGDQVKVMIKEVVNQFGSLDVLVNNAGITKDNLLMRMKEQEWDDVINTNLKGTFNCIQKATPQMLRQRSGAIINLSSIVAAMGNPGQANYVATKAGIEGLTKSSARELASRGITVNAVAPGFIVSDMTNALNEDLKSQMLEQIPLSRFGEDKDIAYAVSFLASDRAKYITGQTLSVNGGMYM . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 96360 97094 . - . GCA_005502385.1_01046_mRNA GCA_005502385.1_01046 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTKSALVTGASRGIGRSIALQLAEDGFNVAVNYAGNKEKAEAVVKEIKEKGVESFAIQANVAEGDQVKVMIKEVVNQFGSLDVLVNNAGITKDNLLMRMKEQEWDDVINTNLKGTFNCIQKATPQMLRQRSGAIINLSSIVAAMGNPGQANYVATKAGIEGLTKSSARELASRGITVNAVAPGFIVSDMTNALNEDLKSQMLEQIPLSRFGEDKDIAYAVSFLASDRAKYITGQTLSVNGGMYM . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 96360 97094 . - 0 GCA_005502385.1_01046 GCA_005502385.1_01046_gene,GCA_005502385.1_01046_mRNA GCA_005502385.1_01046 3-oxoacyl-[acyl-carrier-protein] reductase FabG GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTKSALVTGASRGIGRSIALQLAEDGFNVAVNYAGNKEKAEAVVKEIKEKGVESFAIQANVAEGDQVKVMIKEVVNQFGSLDVLVNNAGITKDNLLMRMKEQEWDDVINTNLKGTFNCIQKATPQMLRQRSGAIINLSSIVAAMGNPGQANYVATKAGIEGLTKSSARELASRGITVNAVAPGFIVSDMTNALNEDLKSQMLEQIPLSRFGEDKDIAYAVSFLASDRAKYITGQTLSVNGGMYM persistent 244 fabG 3-oxoacyl-[acyl-carrier-protein] reductase 1.1.1.100 GO:0004316,GO:0006633,GO:0051287 COG1028,I WP_017174582.1 UPI00030432B9 UniRef100_A0A4Q9WTS3,UniRef50_A0A3B9SMK7,UniRef90_A0A5B2YZP8 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 97087 98013 . - . GCA_005502385.1_01047_gene GCA_005502385.1_01047 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKTAIVFPGQGAQKVGMAKDLYQVNKDATSILELAQTTVDFDLLETMFTDKEEKLGETENTQPALLTHSIALLKALNHIDADYTMGHSLGEYSSLVAAGVLKFEDAVKIVRKRGELMTQAFPNGVGSMAAVLGLSYEEVNEICKEISFGDQLIEPANINAPGQIVVSGHKALIDKLTKEGKSLGAKRVIPLAVSGPFHSSMMQVIEENFASFIDQFTWNDAQFPIVQNYNAHGETKAETIKQNMVKQLYSPVQFIKSTEWLIDQGVDHFIEIGPGKVLSGLIKKINRDVKITSIQTLEDVKGWNEND . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 97087 98013 . - . GCA_005502385.1_01047_mRNA GCA_005502385.1_01047 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKTAIVFPGQGAQKVGMAKDLYQVNKDATSILELAQTTVDFDLLETMFTDKEEKLGETENTQPALLTHSIALLKALNHIDADYTMGHSLGEYSSLVAAGVLKFEDAVKIVRKRGELMTQAFPNGVGSMAAVLGLSYEEVNEICKEISFGDQLIEPANINAPGQIVVSGHKALIDKLTKEGKSLGAKRVIPLAVSGPFHSSMMQVIEENFASFIDQFTWNDAQFPIVQNYNAHGETKAETIKQNMVKQLYSPVQFIKSTEWLIDQGVDHFIEIGPGKVLSGLIKKINRDVKITSIQTLEDVKGWNEND . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 97087 98013 . - 0 GCA_005502385.1_01047 GCA_005502385.1_01047_gene,GCA_005502385.1_01047_mRNA GCA_005502385.1_01047 Malonyl CoA-acyl carrier protein transacylase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKTAIVFPGQGAQKVGMAKDLYQVNKDATSILELAQTTVDFDLLETMFTDKEEKLGETENTQPALLTHSIALLKALNHIDADYTMGHSLGEYSSLVAAGVLKFEDAVKIVRKRGELMTQAFPNGVGSMAAVLGLSYEEVNEICKEISFGDQLIEPANINAPGQIVVSGHKALIDKLTKEGKSLGAKRVIPLAVSGPFHSSMMQVIEENFASFIDQFTWNDAQFPIVQNYNAHGETKAETIKQNMVKQLYSPVQFIKSTEWLIDQGVDHFIEIGPGKVLSGLIKKINRDVKITSIQTLEDVKGWNEND persistent 308 fabD ACP S-malonyltransferase 2.3.1.39 GO:0004314,GO:0006633 WP_017174581.1 UPI0002EF600C UniRef100_A0A3S7GSS3,UniRef50_Q99UN8,UniRef90_A0A974QP14 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 98006 98992 . - . GCA_005502385.1_01048_gene GCA_005502385.1_01048 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVKIAVDMMGGDNAPGIVLEAVEKAINDFKDLEIILFGDEKQYTLNHERIEFRHCSEKIEMEDEPVRAIKRKKDSSMVRMAEAVKSGEADGCVSAGNTGALMSAGLFIVGRIKGVARPALVVTLPTIDGKGFVFLDVGANADAKPEHLLQYAQLGNIYAQKIRGIQQPKISLLNIGTEPAKGNALTKKTYQLLKDEATIRFNGNIEAKTLMEGDTDVVVTDGYTGNMVLKNIEGTAKSIGKMLKGTLLANLKNKLAAAILKKDISKFAKKLDYAEYGGSVLLGLDGTVVKAHGSSNARAFYSAIRQAKIAGDEQIVKIMRETVGSDNE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 98006 98992 . - . GCA_005502385.1_01048_mRNA GCA_005502385.1_01048 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVKIAVDMMGGDNAPGIVLEAVEKAINDFKDLEIILFGDEKQYTLNHERIEFRHCSEKIEMEDEPVRAIKRKKDSSMVRMAEAVKSGEADGCVSAGNTGALMSAGLFIVGRIKGVARPALVVTLPTIDGKGFVFLDVGANADAKPEHLLQYAQLGNIYAQKIRGIQQPKISLLNIGTEPAKGNALTKKTYQLLKDEATIRFNGNIEAKTLMEGDTDVVVTDGYTGNMVLKNIEGTAKSIGKMLKGTLLANLKNKLAAAILKKDISKFAKKLDYAEYGGSVLLGLDGTVVKAHGSSNARAFYSAIRQAKIAGDEQIVKIMRETVGSDNE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 98006 98992 . - 0 GCA_005502385.1_01048 GCA_005502385.1_01048_gene,GCA_005502385.1_01048_mRNA GCA_005502385.1_01048 Phosphate acyltransferase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVKIAVDMMGGDNAPGIVLEAVEKAINDFKDLEIILFGDEKQYTLNHERIEFRHCSEKIEMEDEPVRAIKRKKDSSMVRMAEAVKSGEADGCVSAGNTGALMSAGLFIVGRIKGVARPALVVTLPTIDGKGFVFLDVGANADAKPEHLLQYAQLGNIYAQKIRGIQQPKISLLNIGTEPAKGNALTKKTYQLLKDEATIRFNGNIEAKTLMEGDTDVVVTDGYTGNMVLKNIEGTAKSIGKMLKGTLLANLKNKLAAAILKKDISKFAKKLDYAEYGGSVLLGLDGTVVKAHGSSNARAFYSAIRQAKIAGDEQIVKIMRETVGSDNE persistent 328 plsX phosphate acyltransferase PlsX 2.3.1.274 GO:0008610,GO:0043811 WP_017174580.1 UPI0002EC992F UniRef100_A0A4Q9WVG2,UniRef50_P71018,UniRef90_A0A657ZTF8 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 98985 99554 . - . GCA_005502385.1_01049_gene GCA_005502385.1_01049 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKLKKTERRHEIKKAINENPFITDSELCELFNVSIQTIRLDRTQLNIPELRKRIKSVAKQNYEYIKGLEANEVIGDLIQVKPNYSAQSIIEITEEYVFQKTRIARGHILFAQANSLCVALIHNSTVLTQESNLKFIEKVKLHDNVRAEATVINRTNRHYDIKVESFVKDTRVFTGIFKMFYISEDENHG . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 98985 99554 . - . GCA_005502385.1_01049_mRNA GCA_005502385.1_01049 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKLKKTERRHEIKKAINENPFITDSELCELFNVSIQTIRLDRTQLNIPELRKRIKSVAKQNYEYIKGLEANEVIGDLIQVKPNYSAQSIIEITEEYVFQKTRIARGHILFAQANSLCVALIHNSTVLTQESNLKFIEKVKLHDNVRAEATVINRTNRHYDIKVESFVKDTRVFTGIFKMFYISEDENHG . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 98985 99554 . - 0 GCA_005502385.1_01049 GCA_005502385.1_01049_gene,GCA_005502385.1_01049_mRNA GCA_005502385.1_01049 Transcription factor FapR GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKLKKTERRHEIKKAINENPFITDSELCELFNVSIQTIRLDRTQLNIPELRKRIKSVAKQNYEYIKGLEANEVIGDLIQVKPNYSAQSIIEITEEYVFQKTRIARGHILFAQANSLCVALIHNSTVLTQESNLKFIEKVKLHDNVRAEATVINRTNRHYDIKVESFVKDTRVFTGIFKMFYISEDENHG persistent 189 fapR transcription factor FapR GO:0003700,GO:0045717,GO:0045892 WP_017174579.1 UPI0002FC8A0E UniRef100_A0A4Q9WTD7,UniRef50_Q4L5T0,UniRef90_A0A657ZT65 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 99693 101744 . - . GCA_005502385.1_01050_gene GCA_005502385.1_01050 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKVSLIESPYPLQSIKGLGPKRIALLHELNIHTIEDLVLYLPTRYEDNTVVDLNLAEDQSTVTVAGEIYSVPTVAFFGRNKSKLTVHLMIDNIAVKCVFFNQPYLKKKIELNQIVTIKGKWNRAKQEINGNRIFFNDTHTSTEEVRLEPVYRLKEGIKQKQMRDMIHQSLNDVTIHEWITEELRQKYKLELLDYTIKTLHLPKDKQALMRARRTYAFTELFMFELRMQWLNRLEKASDEAIEINYDINKVKSFIQSLPFELTDAQKSSVNEIFRDLKAPIRMHRLLQGDVGSGKTVVAAICMYALKTAGYQSALMVPTEILAEQHANSLTELFGDHMNVALLTGSVKGKKRRVLLEQLENGTIDCLIGTHALIQDDVQFKNVGLVITDEQHRFGVNQRQLLREKGAMTNVLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPIITHWAKHEQYDQVLAQMTSELKKGRQAYVICPLIESSEHLEDVQNVVELFESLQEFYGKTHVGLLHGKMSADEKDDVMARFSHHDIDILVSTTVVEVGVNVPNATFMMIYDADRFGLSTLHQLRGRVGRSEHQSYCVLIASPKTETGIERMTIMTQTTDGFELSERDLEMRGPGDFFGVKQSGLPDFMVANIVEDYRMLEVARDEAAELIQSGEFFTEKYERLRAFINDHLLNISFD . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 99693 101744 . - . GCA_005502385.1_01050_mRNA GCA_005502385.1_01050 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKVSLIESPYPLQSIKGLGPKRIALLHELNIHTIEDLVLYLPTRYEDNTVVDLNLAEDQSTVTVAGEIYSVPTVAFFGRNKSKLTVHLMIDNIAVKCVFFNQPYLKKKIELNQIVTIKGKWNRAKQEINGNRIFFNDTHTSTEEVRLEPVYRLKEGIKQKQMRDMIHQSLNDVTIHEWITEELRQKYKLELLDYTIKTLHLPKDKQALMRARRTYAFTELFMFELRMQWLNRLEKASDEAIEINYDINKVKSFIQSLPFELTDAQKSSVNEIFRDLKAPIRMHRLLQGDVGSGKTVVAAICMYALKTAGYQSALMVPTEILAEQHANSLTELFGDHMNVALLTGSVKGKKRRVLLEQLENGTIDCLIGTHALIQDDVQFKNVGLVITDEQHRFGVNQRQLLREKGAMTNVLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPIITHWAKHEQYDQVLAQMTSELKKGRQAYVICPLIESSEHLEDVQNVVELFESLQEFYGKTHVGLLHGKMSADEKDDVMARFSHHDIDILVSTTVVEVGVNVPNATFMMIYDADRFGLSTLHQLRGRVGRSEHQSYCVLIASPKTETGIERMTIMTQTTDGFELSERDLEMRGPGDFFGVKQSGLPDFMVANIVEDYRMLEVARDEAAELIQSGEFFTEKYERLRAFINDHLLNISFD . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 99693 101744 . - 0 GCA_005502385.1_01050 GCA_005502385.1_01050_gene,GCA_005502385.1_01050_mRNA GCA_005502385.1_01050 ATP-dependent DNA helicase RecG GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKVSLIESPYPLQSIKGLGPKRIALLHELNIHTIEDLVLYLPTRYEDNTVVDLNLAEDQSTVTVAGEIYSVPTVAFFGRNKSKLTVHLMIDNIAVKCVFFNQPYLKKKIELNQIVTIKGKWNRAKQEINGNRIFFNDTHTSTEEVRLEPVYRLKEGIKQKQMRDMIHQSLNDVTIHEWITEELRQKYKLELLDYTIKTLHLPKDKQALMRARRTYAFTELFMFELRMQWLNRLEKASDEAIEINYDINKVKSFIQSLPFELTDAQKSSVNEIFRDLKAPIRMHRLLQGDVGSGKTVVAAICMYALKTAGYQSALMVPTEILAEQHANSLTELFGDHMNVALLTGSVKGKKRRVLLEQLENGTIDCLIGTHALIQDDVQFKNVGLVITDEQHRFGVNQRQLLREKGAMTNVLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPIITHWAKHEQYDQVLAQMTSELKKGRQAYVICPLIESSEHLEDVQNVVELFESLQEFYGKTHVGLLHGKMSADEKDDVMARFSHHDIDILVSTTVVEVGVNVPNATFMMIYDADRFGLSTLHQLRGRVGRSEHQSYCVLIASPKTETGIERMTIMTQTTDGFELSERDLEMRGPGDFFGVKQSGLPDFMVANIVEDYRMLEVARDEAAELIQSGEFFTEKYERLRAFINDHLLNISFD persistent 683 recG ATP-dependent DNA helicase RecG 3.6.4.12,5.6.2.4 GO:0003676,GO:0003678,GO:0005524,GO:0006281,GO:0006310 WP_019835645.1 UPI000365E71D UniRef100_UPI000365E71D,UniRef50_O50581,UniRef90_A0A3S7GT65 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 102328 103986 . - . GCA_005502385.1_01051_gene GCA_005502385.1_01051 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MISKINGKLFADMIIQGAHNLSNNADLVDSLNVYPVPDGDTGTNMNLTITSGREEVENNLSQSIGELGKTFSKGLLMGARGNSGVILSQLFRGFCKNIEDEKEINAQQFASSFQAGVDTAYKAVMKPVEGTILTVAKDAANAAMTKAEETDDCIEVMKYTIEKAEQSLNNTPNLLAVLKEVGVVDSGGKGLLCVYEGFLKGLKGEKVEANKQKLDTEDLVHEEHDFHGVINTEDIKYGYCTEMMVRFGKDKKEFNEQTFRNDMSEFGDSLLVINDDEIVKVHVHTETPGEVFNYGQQYGELIKLKVENMREQHREVIRKEQSHQQATASQQPKTVETAVIAISMGEGISELFTSMGATHIISGGQTMNPSTEDIVKVIEQSECQRAIILPNNKNIRMSSDQAAQLVKADTVVIPTTSIPQGIAALFQYDVASTLEENASHMNTALETVKSGSITFAVRDTKIDGVDIKKDEFMGLAESKIVTSNADEFKTITGLLSTLLNEESEILTVITGEYAQSDMTTQLEEWIENEYPDVEIEIHKGDQPIYPYLFAVE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 102328 103986 . - . GCA_005502385.1_01051_mRNA GCA_005502385.1_01051 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MISKINGKLFADMIIQGAHNLSNNADLVDSLNVYPVPDGDTGTNMNLTITSGREEVENNLSQSIGELGKTFSKGLLMGARGNSGVILSQLFRGFCKNIEDEKEINAQQFASSFQAGVDTAYKAVMKPVEGTILTVAKDAANAAMTKAEETDDCIEVMKYTIEKAEQSLNNTPNLLAVLKEVGVVDSGGKGLLCVYEGFLKGLKGEKVEANKQKLDTEDLVHEEHDFHGVINTEDIKYGYCTEMMVRFGKDKKEFNEQTFRNDMSEFGDSLLVINDDEIVKVHVHTETPGEVFNYGQQYGELIKLKVENMREQHREVIRKEQSHQQATASQQPKTVETAVIAISMGEGISELFTSMGATHIISGGQTMNPSTEDIVKVIEQSECQRAIILPNNKNIRMSSDQAAQLVKADTVVIPTTSIPQGIAALFQYDVASTLEENASHMNTALETVKSGSITFAVRDTKIDGVDIKKDEFMGLAESKIVTSNADEFKTITGLLSTLLNEESEILTVITGEYAQSDMTTQLEEWIENEYPDVEIEIHKGDQPIYPYLFAVE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 102328 103986 . - 0 GCA_005502385.1_01051 GCA_005502385.1_01051_gene,GCA_005502385.1_01051_mRNA GCA_005502385.1_01051 putative protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MISKINGKLFADMIIQGAHNLSNNADLVDSLNVYPVPDGDTGTNMNLTITSGREEVENNLSQSIGELGKTFSKGLLMGARGNSGVILSQLFRGFCKNIEDEKEINAQQFASSFQAGVDTAYKAVMKPVEGTILTVAKDAANAAMTKAEETDDCIEVMKYTIEKAEQSLNNTPNLLAVLKEVGVVDSGGKGLLCVYEGFLKGLKGEKVEANKQKLDTEDLVHEEHDFHGVINTEDIKYGYCTEMMVRFGKDKKEFNEQTFRNDMSEFGDSLLVINDDEIVKVHVHTETPGEVFNYGQQYGELIKLKVENMREQHREVIRKEQSHQQATASQQPKTVETAVIAISMGEGISELFTSMGATHIISGGQTMNPSTEDIVKVIEQSECQRAIILPNNKNIRMSSDQAAQLVKADTVVIPTTSIPQGIAALFQYDVASTLEENASHMNTALETVKSGSITFAVRDTKIDGVDIKKDEFMGLAESKIVTSNADEFKTITGLLSTLLNEESEILTVITGEYAQSDMTTQLEEWIENEYPDVEIEIHKGDQPIYPYLFAVE persistent 552 fakA fatty acid kinase catalytic subunit FakA WP_137689514.1 UPI0010FA2F0B UniRef100_UPI0010FA2F0B,UniRef50_O34751,UniRef90_A0AAE5MZB4 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 104001 104375 . - . GCA_005502385.1_01052_gene GCA_005502385.1_01052 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTLEILNDYGKIDISNEVIASVVGSKAVESYGIVGMASRQQVRDGIAEILGHENYAKGIVVKEDNGVIDIDMYIIVSYGVKISEVANNVQSSVKYTLESSLNIKVNSINIFVQGVRLNNKGKKV . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 104001 104375 . - . GCA_005502385.1_01052_mRNA GCA_005502385.1_01052 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTLEILNDYGKIDISNEVIASVVGSKAVESYGIVGMASRQQVRDGIAEILGHENYAKGIVVKEDNGVIDIDMYIIVSYGVKISEVANNVQSSVKYTLESSLNIKVNSINIFVQGVRLNNKGKKV . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 104001 104375 . - 0 GCA_005502385.1_01052 GCA_005502385.1_01052_gene,GCA_005502385.1_01052_mRNA GCA_005502385.1_01052 putative protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTLEILNDYGKIDISNEVIASVVGSKAVESYGIVGMASRQQVRDGIAEILGHENYAKGIVVKEDNGVIDIDMYIIVSYGVKISEVANNVQSSVKYTLESSLNIKVNSINIFVQGVRLNNKGKKV persistent 124 yloU Asp23/Gls24 family envelope stress response protein COG1302,S WP_002448841.1 UPI00019FC8A1 UniRef100_A0A1J6E2V3,UniRef50_F4BPZ1,UniRef90_A0A2A1KCM6 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 104645 104833 . + . GCA_005502385.1_01053_gene GCA_005502385.1_01053 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGKQCYVTGRKATTGNNRSHALNANKRRFNANLQKVRILVDGKPKKVWVSARALKSGKVTRV . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 104645 104833 . + . GCA_005502385.1_01053_mRNA GCA_005502385.1_01053 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGKQCYVTGRKATTGNNRSHALNANKRRFNANLQKVRILVDGKPKKVWVSARALKSGKVTRV . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 104645 104833 . + 0 GCA_005502385.1_01053 GCA_005502385.1_01053_gene,GCA_005502385.1_01053_mRNA GCA_005502385.1_01053 50S ribosomal protein L28 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGKQCYVTGRKATTGNNRSHALNANKRRFNANLQKVRILVDGKPKKVWVSARALKSGKVTRV persistent 62 rpmB 50S ribosomal protein L28 GO:0003735,GO:0005840,GO:0006412,GO:1990904 COG0227,J WP_002448748.1 UPI00019FC8A2 UniRef100_A0A1L8Y9W5,UniRef50_Q82ZE4,UniRef90_Q49X05 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 104885 105526 . - . GCA_005502385.1_01054_gene GCA_005502385.1_01054 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKINLLCGDRHLPPHIFSKLSTEPWGGIDRGTLILSEHSIVPVFSVGDFDSVNDEEREILKKTLNIHPVKAEKDDTDLALGVEQAIQKGYTEIDIYGATGGRLDHFMGTLQILFKSDYIKKEIIIKVIDKQNEIMLLNTGTHQLHKSDKYQYVSFIPVNGEVILSLSGFKYNLNHQHLEIGSTLTISNEVNRSMAIIEVEKGQVLQMRSKDLE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 104885 105526 . - . GCA_005502385.1_01054_mRNA GCA_005502385.1_01054 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKINLLCGDRHLPPHIFSKLSTEPWGGIDRGTLILSEHSIVPVFSVGDFDSVNDEEREILKKTLNIHPVKAEKDDTDLALGVEQAIQKGYTEIDIYGATGGRLDHFMGTLQILFKSDYIKKEIIIKVIDKQNEIMLLNTGTHQLHKSDKYQYVSFIPVNGEVILSLSGFKYNLNHQHLEIGSTLTISNEVNRSMAIIEVEKGQVLQMRSKDLE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 104885 105526 . - 0 GCA_005502385.1_01054 GCA_005502385.1_01054_gene,GCA_005502385.1_01054_mRNA GCA_005502385.1_01054 Thiamine pyrophosphokinase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKINLLCGDRHLPPHIFSKLSTEPWGGIDRGTLILSEHSIVPVFSVGDFDSVNDEEREILKKTLNIHPVKAEKDDTDLALGVEQAIQKGYTEIDIYGATGGRLDHFMGTLQILFKSDYIKKEIIIKVIDKQNEIMLLNTGTHQLHKSDKYQYVSFIPVNGEVILSLSGFKYNLNHQHLEIGSTLTISNEVNRSMAIIEVEKGQVLQMRSKDLE persistent 213 thiamine diphosphokinase 2.7.6.2 GO:0004788,GO:0006772 WP_070585933.1 UPI0008A403F3 UniRef100_UPI0008A403F3,UniRef50_A0A380G740,UniRef90_A0A974KY04 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 105531 106175 . - . GCA_005502385.1_01055_gene GCA_005502385.1_01055 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRHIFPSLLSVDFLNLKHEIQLLEEAGVDGLHFDVMDGQFVPNISIGLPILDAVKSTTQLPIDVHLMIENPENYIETFAKHGAGMISVHIESTPHIHRAIQLIKSLDKKAGVVINPGTPVDRVVPVLSMVDYVLVMTVNPGFGGQTFIDMCASKIKLLNDLKSSFNLNFDIEVDGGINDKTIDICAKHGANLFVTGSYFFNHDDYKTVTKILRG . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 105531 106175 . - . GCA_005502385.1_01055_mRNA GCA_005502385.1_01055 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRHIFPSLLSVDFLNLKHEIQLLEEAGVDGLHFDVMDGQFVPNISIGLPILDAVKSTTQLPIDVHLMIENPENYIETFAKHGAGMISVHIESTPHIHRAIQLIKSLDKKAGVVINPGTPVDRVVPVLSMVDYVLVMTVNPGFGGQTFIDMCASKIKLLNDLKSSFNLNFDIEVDGGINDKTIDICAKHGANLFVTGSYFFNHDDYKTVTKILRG . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 105531 106175 . - 0 GCA_005502385.1_01055 GCA_005502385.1_01055_gene,GCA_005502385.1_01055_mRNA GCA_005502385.1_01055 Ribulose-phosphate 3-epimerase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRHIFPSLLSVDFLNLKHEIQLLEEAGVDGLHFDVMDGQFVPNISIGLPILDAVKSTTQLPIDVHLMIENPENYIETFAKHGAGMISVHIESTPHIHRAIQLIKSLDKKAGVVINPGTPVDRVVPVLSMVDYVLVMTVNPGFGGQTFIDMCASKIKLLNDLKSSFNLNFDIEVDGGINDKTIDICAKHGANLFVTGSYFFNHDDYKTVTKILRG persistent 214 rpe ribulose-phosphate 3-epimerase 5.1.3.1 GO:0004750,GO:0006098 UniRef50_B9EBA2,UniRef90_A0A974KY17 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 106175 107050 . - . GCA_005502385.1_01056_gene GCA_005502385.1_01056 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 METGRIVKLISGIYQVDVGGKKYNTKPRGLFRKKKFSPVVGDIVDFDIQNEDEGYIHHVHERHNALKRPPVSNIDGLIIVMSAVEPNFSTQLLDRFLVIAHSYNLSPSILVTKKDIASETQINHIETILNTYKEIGYSVQFVGKETDKVDIVNTWPNGLIVLSGQSGVGKSTFINTFKPELNLETNDISKSLNRGKHTTRHVELFERENGFIADTPGFSALDFDHIEKDDVKYYFKEINTFGNDCKFRNCNHIKEPKCNVKHQLENNNLAQFRYEHYLQLVNEISNRKVRY . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 106175 107050 . - . GCA_005502385.1_01056_mRNA GCA_005502385.1_01056 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 METGRIVKLISGIYQVDVGGKKYNTKPRGLFRKKKFSPVVGDIVDFDIQNEDEGYIHHVHERHNALKRPPVSNIDGLIIVMSAVEPNFSTQLLDRFLVIAHSYNLSPSILVTKKDIASETQINHIETILNTYKEIGYSVQFVGKETDKVDIVNTWPNGLIVLSGQSGVGKSTFINTFKPELNLETNDISKSLNRGKHTTRHVELFERENGFIADTPGFSALDFDHIEKDDVKYYFKEINTFGNDCKFRNCNHIKEPKCNVKHQLENNNLAQFRYEHYLQLVNEISNRKVRY . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 106175 107050 . - 0 GCA_005502385.1_01056 GCA_005502385.1_01056_gene,GCA_005502385.1_01056_mRNA GCA_005502385.1_01056 Small ribosomal subunit biogenesis GTPase RsgA GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 METGRIVKLISGIYQVDVGGKKYNTKPRGLFRKKKFSPVVGDIVDFDIQNEDEGYIHHVHERHNALKRPPVSNIDGLIIVMSAVEPNFSTQLLDRFLVIAHSYNLSPSILVTKKDIASETQINHIETILNTYKEIGYSVQFVGKETDKVDIVNTWPNGLIVLSGQSGVGKSTFINTFKPELNLETNDISKSLNRGKHTTRHVELFERENGFIADTPGFSALDFDHIEKDDVKYYFKEINTFGNDCKFRNCNHIKEPKCNVKHQLENNNLAQFRYEHYLQLVNEISNRKVRY persistent 291 rsgA ribosome small subunit-dependent GTPase A 3.1.3.100,3.6.1.- GO:0003924,GO:0005525,GO:0006412,GO:0043022 WP_054105457.1 UPI0006B9EA28 UniRef100_UPI0006B9EA28,UniRef50_Q8CSV8,UniRef90_A0A974KZU0 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 107349 109373 . - . GCA_005502385.1_01057_gene GCA_005502385.1_01057 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNGKLINDRYQLLDKLGGGGMSIVYLAEDTILERKVAIKAISISQNEKDETMKRFYREVNSATQIVHENIVEVYDVEEDDDNFYLIMEYIDGPTLSEYIHSHGPLNIETAIDFIKQILNGVKQAHEQRIIHRDIKPQNVLINKDKILKIFDFGIAKALSETSMTQTNHVLGTVQYLSPEQAKGDKTNETTDIYSIGIVLYEMLVGEPPFRGETAVSIAIKHIQETVPNITEKHPNIPQSLSNVVLKATEKNPKDRYQTIEEMYNDLSSVLVTSRLNEEKHTRISDTTQTVPIDKKEIKNKLDEENHKKDIAQTMQIPIINHHKFQASENNVYTPKRKKRSKKKKVAIIFILALLLLSLIGFIAWGMLGDKYAEMPDLTGKTEKEAEKVLKASHLEIGHISREYNDDYPENKIINSNPKAGERVNQQEKVDVVLSKGPEKINMPNVIGIKKEDAIKKLKDHKLNHVTINQEYNSQMPKGYIFKQNINPNESVKINDHHIVLTESLGVKKVYVKDYENKNYQNAKKELESRGLKVQVKTTNSDTKDKDIIISQSPKQTEVNEGSTVELMVSKGKDKKKDSKEDSDSSDDKKDNHTTSVKNYTETYHIPYTGNDGESQKVKIYIRDKNNSGTQVSQTYNIHKDKIITIPLKFEQGDSAGYTIEVDDNVIADKDIDYE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 107349 109373 . - . GCA_005502385.1_01057_mRNA GCA_005502385.1_01057 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNGKLINDRYQLLDKLGGGGMSIVYLAEDTILERKVAIKAISISQNEKDETMKRFYREVNSATQIVHENIVEVYDVEEDDDNFYLIMEYIDGPTLSEYIHSHGPLNIETAIDFIKQILNGVKQAHEQRIIHRDIKPQNVLINKDKILKIFDFGIAKALSETSMTQTNHVLGTVQYLSPEQAKGDKTNETTDIYSIGIVLYEMLVGEPPFRGETAVSIAIKHIQETVPNITEKHPNIPQSLSNVVLKATEKNPKDRYQTIEEMYNDLSSVLVTSRLNEEKHTRISDTTQTVPIDKKEIKNKLDEENHKKDIAQTMQIPIINHHKFQASENNVYTPKRKKRSKKKKVAIIFILALLLLSLIGFIAWGMLGDKYAEMPDLTGKTEKEAEKVLKASHLEIGHISREYNDDYPENKIINSNPKAGERVNQQEKVDVVLSKGPEKINMPNVIGIKKEDAIKKLKDHKLNHVTINQEYNSQMPKGYIFKQNINPNESVKINDHHIVLTESLGVKKVYVKDYENKNYQNAKKELESRGLKVQVKTTNSDTKDKDIIISQSPKQTEVNEGSTVELMVSKGKDKKKDSKEDSDSSDDKKDNHTTSVKNYTETYHIPYTGNDGESQKVKIYIRDKNNSGTQVSQTYNIHKDKIITIPLKFEQGDSAGYTIEVDDNVIADKDIDYE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 107349 109373 . - 0 GCA_005502385.1_01057 GCA_005502385.1_01057_gene,GCA_005502385.1_01057_mRNA GCA_005502385.1_01057 Serine/threonine-protein kinase PrkC GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNGKLINDRYQLLDKLGGGGMSIVYLAEDTILERKVAIKAISISQNEKDETMKRFYREVNSATQIVHENIVEVYDVEEDDDNFYLIMEYIDGPTLSEYIHSHGPLNIETAIDFIKQILNGVKQAHEQRIIHRDIKPQNVLINKDKILKIFDFGIAKALSETSMTQTNHVLGTVQYLSPEQAKGDKTNETTDIYSIGIVLYEMLVGEPPFRGETAVSIAIKHIQETVPNITEKHPNIPQSLSNVVLKATEKNPKDRYQTIEEMYNDLSSVLVTSRLNEEKHTRISDTTQTVPIDKKEIKNKLDEENHKKDIAQTMQIPIINHHKFQASENNVYTPKRKKRSKKKKVAIIFILALLLLSLIGFIAWGMLGDKYAEMPDLTGKTEKEAEKVLKASHLEIGHISREYNDDYPENKIINSNPKAGERVNQQEKVDVVLSKGPEKINMPNVIGIKKEDAIKKLKDHKLNHVTINQEYNSQMPKGYIFKQNINPNESVKINDHHIVLTESLGVKKVYVKDYENKNYQNAKKELESRGLKVQVKTTNSDTKDKDIIISQSPKQTEVNEGSTVELMVSKGKDKKKDSKEDSDSSDDKKDNHTTSVKNYTETYHIPYTGNDGESQKVKIYIRDKNNSGTQVSQTYNIHKDKIITIPLKFEQGDSAGYTIEVDDNVIADKDIDYE persistent 674 pknB Stk1 family PASTA domain-containing Ser/Thr kinase GO:0004672,GO:0005524,GO:0006468 WP_054105456.1 UPI0006B93D3A UniRef100_UPI0006B93D3A,UniRef50_A6QGC0,UniRef90_A0A3S7GSS8 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 109370 110113 . - . GCA_005502385.1_01058_gene GCA_005502385.1_01058 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLNAQFFTDTGQHREKNEDAGGIFYNQTHQQLLVLCDGMGGHKAGEVASQFVTNQLRDYFEIENFIELDQAESWLSKTLKDINLELFEYATTNEEYRGMGTTCVCALIFDNKIVVANIGDSRAYVINSREIEQITYDHSFVNHLLMTGQITEEEAFNHPQRNIITKVMGTDRRVSPDIFTKRISYYNYLLLNSDGLSDYVRNHEIETLMNQSTSLNELGEALIQAALDHQSKDNVSVLLAEIEGNNV . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 109370 110113 . - . GCA_005502385.1_01058_mRNA GCA_005502385.1_01058 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLNAQFFTDTGQHREKNEDAGGIFYNQTHQQLLVLCDGMGGHKAGEVASQFVTNQLRDYFEIENFIELDQAESWLSKTLKDINLELFEYATTNEEYRGMGTTCVCALIFDNKIVVANIGDSRAYVINSREIEQITYDHSFVNHLLMTGQITEEEAFNHPQRNIITKVMGTDRRVSPDIFTKRISYYNYLLLNSDGLSDYVRNHEIETLMNQSTSLNELGEALIQAALDHQSKDNVSVLLAEIEGNNV . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 109370 110113 . - 0 GCA_005502385.1_01058 GCA_005502385.1_01058_gene,GCA_005502385.1_01058_mRNA GCA_005502385.1_01058 Serine/threonine phosphatase stp GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLNAQFFTDTGQHREKNEDAGGIFYNQTHQQLLVLCDGMGGHKAGEVASQFVTNQLRDYFEIENFIELDQAESWLSKTLKDINLELFEYATTNEEYRGMGTTCVCALIFDNKIVVANIGDSRAYVINSREIEQITYDHSFVNHLLMTGQITEEEAFNHPQRNIITKVMGTDRRVSPDIFTKRISYYNYLLLNSDGLSDYVRNHEIETLMNQSTSLNELGEALIQAALDHQSKDNVSVLLAEIEGNNV persistent 247 Stp1/IreP family PP2C-type Ser/Thr phosphatase 3.1.3.16 GO:0004722,GO:0006470 WP_019835576.1 UPI000367B34D UniRef100_A0A4Q9WTE6,UniRef50_A0A0D0SSN4,UniRef90_A0A3S7GWN6 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 110119 111213 . - . GCA_005502385.1_01059_gene GCA_005502385.1_01059 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MITAEKKKKNKFLPNFEKQSIYSLRYDEMQNWLIEHGQQKFRAKQIFEWLYQKRVDTIDEMTNLSKDLRQLLKDNFVMTTLTTVVKQESKDGTIKFLFELQDGYTIETVLMRHDYGNSVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVSQVLTVQKALDATNERVSQIVIMGIGEPFENYDEMMDFLKIVNDDNSLNIGARHITVSTSGIIPRIYDFADEQIQINFAVSLHAAKDEIRSKLMPINRAYNVEKLMEAIKYYQEKTNRRITFEYGLFGGVNDQLEHARDLAHLIKDLNCHVNLIPVNHVPERNYVKTPKDDIFKFEKELKRLGINATIRREQGSDIDAACGQLRAKERQVETR . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 110119 111213 . - . GCA_005502385.1_01059_mRNA GCA_005502385.1_01059 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MITAEKKKKNKFLPNFEKQSIYSLRYDEMQNWLIEHGQQKFRAKQIFEWLYQKRVDTIDEMTNLSKDLRQLLKDNFVMTTLTTVVKQESKDGTIKFLFELQDGYTIETVLMRHDYGNSVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVSQVLTVQKALDATNERVSQIVIMGIGEPFENYDEMMDFLKIVNDDNSLNIGARHITVSTSGIIPRIYDFADEQIQINFAVSLHAAKDEIRSKLMPINRAYNVEKLMEAIKYYQEKTNRRITFEYGLFGGVNDQLEHARDLAHLIKDLNCHVNLIPVNHVPERNYVKTPKDDIFKFEKELKRLGINATIRREQGSDIDAACGQLRAKERQVETR . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 110119 111213 . - 0 GCA_005502385.1_01059 GCA_005502385.1_01059_gene,GCA_005502385.1_01059_mRNA GCA_005502385.1_01059 putative dual-specificity RNA methyltransferase RlmN GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MITAEKKKKNKFLPNFEKQSIYSLRYDEMQNWLIEHGQQKFRAKQIFEWLYQKRVDTIDEMTNLSKDLRQLLKDNFVMTTLTTVVKQESKDGTIKFLFELQDGYTIETVLMRHDYGNSVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVSQVLTVQKALDATNERVSQIVIMGIGEPFENYDEMMDFLKIVNDDNSLNIGARHITVSTSGIIPRIYDFADEQIQINFAVSLHAAKDEIRSKLMPINRAYNVEKLMEAIKYYQEKTNRRITFEYGLFGGVNDQLEHARDLAHLIKDLNCHVNLIPVNHVPERNYVKTPKDDIFKFEKELKRLGINATIRREQGSDIDAACGQLRAKERQVETR persistent 364 rlmN 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 2.1.1.192 GO:0000049,GO:0002935,GO:0005737,GO:0008757,GO:0016433,GO:0019843,GO:0030488,GO:0046677,GO:0046872,GO:0051539,GO:0070040,GO:0070475 COG0820,J WP_017174571.1 UPI000318F1E7 UniRef100_A0A3S7GSW8,UniRef50_O34617,UniRef90_Q2FZ66 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 111215 112522 . - . GCA_005502385.1_01060_gene GCA_005502385.1_01060 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTQSVRDLAFHTIQDILNDNAYSNLKINEVINQYNIATVDKALFTELVYGTIKRKMTLDFYLKPFVKTRIKGWVRQLLWMSLYQYVFLDKIPNHAIINEAVNIAKRRGGQHNGNIVNAILRHIFKSDLPTLETIKNEKQRMTIEYSIPRWIIEHWITHYGIETTHKIAKSFLVQSASTVRVNTSRTDVETISKELLQEGYHVDIDQLIPYCLHLTGKPVIESRAFKDGLISIQDKSSMLVGYLMDVQKDDTILDACSAPGGKACHMAELLASTGHVDATDIHKHKIGLIKENIKKLKLKNVSTFDHDATQPYSELYDKILVDAPCSGLGVLRHKPEIKYVQSKDSINDLVEIQLSILDNVKHNLKPGGSLIYSTCTIEQMENENVIYTFLKENKDFEFELMTHPVTGEKVKTLQILPQDFNSDGFFITKIKRKES . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 111215 112522 . - . GCA_005502385.1_01060_mRNA GCA_005502385.1_01060 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTQSVRDLAFHTIQDILNDNAYSNLKINEVINQYNIATVDKALFTELVYGTIKRKMTLDFYLKPFVKTRIKGWVRQLLWMSLYQYVFLDKIPNHAIINEAVNIAKRRGGQHNGNIVNAILRHIFKSDLPTLETIKNEKQRMTIEYSIPRWIIEHWITHYGIETTHKIAKSFLVQSASTVRVNTSRTDVETISKELLQEGYHVDIDQLIPYCLHLTGKPVIESRAFKDGLISIQDKSSMLVGYLMDVQKDDTILDACSAPGGKACHMAELLASTGHVDATDIHKHKIGLIKENIKKLKLKNVSTFDHDATQPYSELYDKILVDAPCSGLGVLRHKPEIKYVQSKDSINDLVEIQLSILDNVKHNLKPGGSLIYSTCTIEQMENENVIYTFLKENKDFEFELMTHPVTGEKVKTLQILPQDFNSDGFFITKIKRKES . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 111215 112522 . - 0 GCA_005502385.1_01060 GCA_005502385.1_01060_gene,GCA_005502385.1_01060_mRNA GCA_005502385.1_01060 Ribosomal RNA small subunit methyltransferase B GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTQSVRDLAFHTIQDILNDNAYSNLKINEVINQYNIATVDKALFTELVYGTIKRKMTLDFYLKPFVKTRIKGWVRQLLWMSLYQYVFLDKIPNHAIINEAVNIAKRRGGQHNGNIVNAILRHIFKSDLPTLETIKNEKQRMTIEYSIPRWIIEHWITHYGIETTHKIAKSFLVQSASTVRVNTSRTDVETISKELLQEGYHVDIDQLIPYCLHLTGKPVIESRAFKDGLISIQDKSSMLVGYLMDVQKDDTILDACSAPGGKACHMAELLASTGHVDATDIHKHKIGLIKENIKKLKLKNVSTFDHDATQPYSELYDKILVDAPCSGLGVLRHKPEIKYVQSKDSINDLVEIQLSILDNVKHNLKPGGSLIYSTCTIEQMENENVIYTFLKENKDFEFELMTHPVTGEKVKTLQILPQDFNSDGFFITKIKRKES persistent 435 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 2.1.1.176 GO:0001510,GO:0003723,GO:0006355,GO:0008168 WP_049379523.1 UPI00066D1807 UniRef100_A0A4Q9WSK0,UniRef50_A0A2T4MK73,UniRef90_A0A3S7GT74 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 112519 113451 . - . GCA_005502385.1_01061_gene GCA_005502385.1_01061 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKIIFMGTPDFSTKVLEMLIAEHEVIAVVTQPDRPVGRKRVLTPPPVKKVAETYHIPVYQPEKLKDSNELNELMDLNPDLIVTAAFGQLLPESLLNLPKLGAVNVHASLLPKYRGGAPIHQAIIDGEAQTGITIMYMVKKLDAGNIISQKAIDIEDDDNVGSMHDKLSFLGADLLKETLPSIIDGSNESIPQDDSKATFASNISREDERIDWTKSAKEIHNHIRGLSPWPVAYTTMNDKNLKLYQAHIEKGKNGEPGEIIEITKTAIIVGTGSLDAIALTDIQLSGKKRMLAAQYLSGVQDSLVGTKLV . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 112519 113451 . - . GCA_005502385.1_01061_mRNA GCA_005502385.1_01061 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKIIFMGTPDFSTKVLEMLIAEHEVIAVVTQPDRPVGRKRVLTPPPVKKVAETYHIPVYQPEKLKDSNELNELMDLNPDLIVTAAFGQLLPESLLNLPKLGAVNVHASLLPKYRGGAPIHQAIIDGEAQTGITIMYMVKKLDAGNIISQKAIDIEDDDNVGSMHDKLSFLGADLLKETLPSIIDGSNESIPQDDSKATFASNISREDERIDWTKSAKEIHNHIRGLSPWPVAYTTMNDKNLKLYQAHIEKGKNGEPGEIIEITKTAIIVGTGSLDAIALTDIQLSGKKRMLAAQYLSGVQDSLVGTKLV . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 112519 113451 . - 0 GCA_005502385.1_01061 GCA_005502385.1_01061_gene,GCA_005502385.1_01061_mRNA GCA_005502385.1_01061 Methionyl-tRNA formyltransferase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKIIFMGTPDFSTKVLEMLIAEHEVIAVVTQPDRPVGRKRVLTPPPVKKVAETYHIPVYQPEKLKDSNELNELMDLNPDLIVTAAFGQLLPESLLNLPKLGAVNVHASLLPKYRGGAPIHQAIIDGEAQTGITIMYMVKKLDAGNIISQKAIDIEDDDNVGSMHDKLSFLGADLLKETLPSIIDGSNESIPQDDSKATFASNISREDERIDWTKSAKEIHNHIRGLSPWPVAYTTMNDKNLKLYQAHIEKGKNGEPGEIIEITKTAIIVGTGSLDAIALTDIQLSGKKRMLAAQYLSGVQDSLVGTKLV persistent 310 fmt methionyl-tRNA formyltransferase 2.1.2.9 GO:0004479,GO:0005737,GO:0071951 WP_029376748.1 UPI000445475C UniRef100_A0A6N0I3V5,UniRef50_Q8Y676,UniRef90_A0A6N0I3V5 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 113444 113932 . - . GCA_005502385.1_01062_gene GCA_005502385.1_01062 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAIKKLVPSTHPVLSKKAKKITTFDENLKRLLLDIEDTLYSEEASALSAPQIGVSQRVAIIDMEAEGLLQLINPKIKTESNEKIIDLEGSVNLPNVFGEVERSKMITVEANDLEGHEIELTAYDDVARMILHIIDQLDGIPFTERATKILTEKEVEAYFDNE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 113444 113932 . - . GCA_005502385.1_01062_mRNA GCA_005502385.1_01062 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAIKKLVPSTHPVLSKKAKKITTFDENLKRLLLDIEDTLYSEEASALSAPQIGVSQRVAIIDMEAEGLLQLINPKIKTESNEKIIDLEGSVNLPNVFGEVERSKMITVEANDLEGHEIELTAYDDVARMILHIIDQLDGIPFTERATKILTEKEVEAYFDNE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 113444 113932 . - 0 GCA_005502385.1_01062 GCA_005502385.1_01062_gene,GCA_005502385.1_01062_mRNA GCA_005502385.1_01062 Peptide deformylase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAIKKLVPSTHPVLSKKAKKITTFDENLKRLLLDIEDTLYSEEASALSAPQIGVSQRVAIIDMEAEGLLQLINPKIKTESNEKIIDLEGSVNLPNVFGEVERSKMITVEANDLEGHEIELTAYDDVARMILHIIDQLDGIPFTERATKILTEKEVEAYFDNE persistent 162 peptide deformylase 3.5.1.88 WP_017174568.1 UPI0002F2A43D UniRef100_A0A3S7GT69,UniRef50_Q5HPX6,UniRef90_A0A974QNS3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 114109 114312 . + . GCA_005502385.1_01063_gene GCA_005502385.1_01063 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEVNKVIYIILAVFLGGFGVHKFYAGKMMSGLLHLLFCWTGIPHIIAIISAILTLLRPADENGNVTM . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 114109 114312 . + . GCA_005502385.1_01063_mRNA GCA_005502385.1_01063 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEVNKVIYIILAVFLGGFGVHKFYAGKMMSGLLHLLFCWTGIPHIIAIISAILTLLRPADENGNVTM . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 114109 114312 . + 0 GCA_005502385.1_01063 GCA_005502385.1_01063_gene,GCA_005502385.1_01063_mRNA GCA_005502385.1_01063 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEVNKVIYIILAVFLGGFGVHKFYAGKMMSGLLHLLFCWTGIPHIIAIISAILTLLRPADENGNVTM persistent 67 NINE protein WP_002448731.1 UPI00019FC8AC UniRef100_A0A1L8Y9X8,UniRef50_Q49WG2,UniRef90_A0A1L8Y9X8 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 114372 116780 . - . GCA_005502385.1_01064_gene GCA_005502385.1_01064 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MIAKVIVDIPSKSVDFKFDYLVPDHLKDFIKVGVRVVVPFGPRTIQGYVMDIQQQPSEDVNIDKLKAIKEIRDIRPELTPELIQLSEWLSHYHISKRISVLEAMLPSAIKAKYTKVFKIVRHNDIEEDILKYFDNNGYYKYKDAQKNNHLNILNRLLEQHLIEEETILSQHTKRKTQRAVRVVEGYNPDDILALLEKKLKQYDVYAYLLEEHHRNVFLKELEEMGFSKSSIEGLVKKGFLEKYDAEIERDPFANRIFEKEEKRMLTPAQNNAFQQIKEKIDYNAQRTFLLHGVTGSGKTEVYLQAIEEVLKKDKQAMMLVPEIALTPQMVLRFKRRFGDDVAVLHSGLSNGERYDEWQKIRDGRARVSVGARSSIFAPFKNLGIIIIDEEHESTYKQEDYPRYHARDIAEWRSQFHQCPLVLGSATPSLESYARAEKNVYQLLTLPERVNQQALPSIDIIDMRAELSSGNRSMFSEELRQAIQDRLNKNEQIVLFLNRRGYASFMLCRDCGYVPQCPHCDISLTYHKTTDQLKCHYCGYQDLPPNLCPNCESPHIRQVGTGTQRVEEILQQEFEEARIIRMDVDTTSRKGAHEKLLTDFEKGKGDILLGTQMIAKGLDYPNITLVGVLNADTMLNLPDFRASERTYQLLTQVSGRAGRHEKPGKVIIQTYNPTHYAIEDVQKNDYLTFYHKEMQFRKLGKYPPYYYLINFTIAHKNMKKVMEAAKHVHQILLQHLSERTLVLGPSPAAIARINNEHRFQILVKYKSEPELIHALQYLDDYYHEAYIKDKLSLRIDINPQILM . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 114372 116780 . - . GCA_005502385.1_01064_mRNA GCA_005502385.1_01064 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MIAKVIVDIPSKSVDFKFDYLVPDHLKDFIKVGVRVVVPFGPRTIQGYVMDIQQQPSEDVNIDKLKAIKEIRDIRPELTPELIQLSEWLSHYHISKRISVLEAMLPSAIKAKYTKVFKIVRHNDIEEDILKYFDNNGYYKYKDAQKNNHLNILNRLLEQHLIEEETILSQHTKRKTQRAVRVVEGYNPDDILALLEKKLKQYDVYAYLLEEHHRNVFLKELEEMGFSKSSIEGLVKKGFLEKYDAEIERDPFANRIFEKEEKRMLTPAQNNAFQQIKEKIDYNAQRTFLLHGVTGSGKTEVYLQAIEEVLKKDKQAMMLVPEIALTPQMVLRFKRRFGDDVAVLHSGLSNGERYDEWQKIRDGRARVSVGARSSIFAPFKNLGIIIIDEEHESTYKQEDYPRYHARDIAEWRSQFHQCPLVLGSATPSLESYARAEKNVYQLLTLPERVNQQALPSIDIIDMRAELSSGNRSMFSEELRQAIQDRLNKNEQIVLFLNRRGYASFMLCRDCGYVPQCPHCDISLTYHKTTDQLKCHYCGYQDLPPNLCPNCESPHIRQVGTGTQRVEEILQQEFEEARIIRMDVDTTSRKGAHEKLLTDFEKGKGDILLGTQMIAKGLDYPNITLVGVLNADTMLNLPDFRASERTYQLLTQVSGRAGRHEKPGKVIIQTYNPTHYAIEDVQKNDYLTFYHKEMQFRKLGKYPPYYYLINFTIAHKNMKKVMEAAKHVHQILLQHLSERTLVLGPSPAAIARINNEHRFQILVKYKSEPELIHALQYLDDYYHEAYIKDKLSLRIDINPQILM . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 114372 116780 . - 0 GCA_005502385.1_01064 GCA_005502385.1_01064_gene,GCA_005502385.1_01064_mRNA GCA_005502385.1_01064 primosomal protein N' GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MIAKVIVDIPSKSVDFKFDYLVPDHLKDFIKVGVRVVVPFGPRTIQGYVMDIQQQPSEDVNIDKLKAIKEIRDIRPELTPELIQLSEWLSHYHISKRISVLEAMLPSAIKAKYTKVFKIVRHNDIEEDILKYFDNNGYYKYKDAQKNNHLNILNRLLEQHLIEEETILSQHTKRKTQRAVRVVEGYNPDDILALLEKKLKQYDVYAYLLEEHHRNVFLKELEEMGFSKSSIEGLVKKGFLEKYDAEIERDPFANRIFEKEEKRMLTPAQNNAFQQIKEKIDYNAQRTFLLHGVTGSGKTEVYLQAIEEVLKKDKQAMMLVPEIALTPQMVLRFKRRFGDDVAVLHSGLSNGERYDEWQKIRDGRARVSVGARSSIFAPFKNLGIIIIDEEHESTYKQEDYPRYHARDIAEWRSQFHQCPLVLGSATPSLESYARAEKNVYQLLTLPERVNQQALPSIDIIDMRAELSSGNRSMFSEELRQAIQDRLNKNEQIVLFLNRRGYASFMLCRDCGYVPQCPHCDISLTYHKTTDQLKCHYCGYQDLPPNLCPNCESPHIRQVGTGTQRVEEILQQEFEEARIIRMDVDTTSRKGAHEKLLTDFEKGKGDILLGTQMIAKGLDYPNITLVGVLNADTMLNLPDFRASERTYQLLTQVSGRAGRHEKPGKVIIQTYNPTHYAIEDVQKNDYLTFYHKEMQFRKLGKYPPYYYLINFTIAHKNMKKVMEAAKHVHQILLQHLSERTLVLGPSPAAIARINNEHRFQILVKYKSEPELIHALQYLDDYYHEAYIKDKLSLRIDINPQILM persistent 802 priA primosomal protein N' 3.6.1.-,5.6.2.4 GO:0003678,GO:0006260,GO:0032508 WP_137689516.1 UPI0010F9CAF2 UniRef100_UPI0010F9CAF2,UniRef50_A0A0B8RHA5,UniRef90_A0A3S7GT70 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 116780 117988 . - . GCA_005502385.1_01065_gene GCA_005502385.1_01065 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKNILLAVTGGIAAYKAIDLTSKLTQANYDVRVMLTDHAQEFVTPLAFQAISRNPVYTNTFIEENPEDIQHIALGDWADCIVVAPATANTIAKLSVGIADDIVTSTLLATETPKFIAPAMNVHMYENKRTQHNISVLKDDEYHFIEPGDGFLACGYIAKGRMEEPLQIVKIINDYFKDKNELSHISHTSFEGKHALVTAGPTIEVIDPVRFVSNRSSGKMGYAIAEALAKRGAKVTLVAGPTQLDNPENVEVIHVESAEEMFNAVTSRYEEQDIVVKAAAVSDYTPADVLNHKMKKQDGNLSVTFKRTKDILKYLGEHKTHQYLVGFAAETQNINAYAQDKLKRKNADVIISNNVGDQTIGFQSDDNELTMHFKDGQRINIKKGKKVQLAQQILDELETRWQ . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 116780 117988 . - . GCA_005502385.1_01065_mRNA GCA_005502385.1_01065 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKNILLAVTGGIAAYKAIDLTSKLTQANYDVRVMLTDHAQEFVTPLAFQAISRNPVYTNTFIEENPEDIQHIALGDWADCIVVAPATANTIAKLSVGIADDIVTSTLLATETPKFIAPAMNVHMYENKRTQHNISVLKDDEYHFIEPGDGFLACGYIAKGRMEEPLQIVKIINDYFKDKNELSHISHTSFEGKHALVTAGPTIEVIDPVRFVSNRSSGKMGYAIAEALAKRGAKVTLVAGPTQLDNPENVEVIHVESAEEMFNAVTSRYEEQDIVVKAAAVSDYTPADVLNHKMKKQDGNLSVTFKRTKDILKYLGEHKTHQYLVGFAAETQNINAYAQDKLKRKNADVIISNNVGDQTIGFQSDDNELTMHFKDGQRINIKKGKKVQLAQQILDELETRWQ . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 116780 117988 . - 0 GCA_005502385.1_01065 GCA_005502385.1_01065_gene,GCA_005502385.1_01065_mRNA GCA_005502385.1_01065 Coenzyme A biosynthesis bifunctional protein CoaBC GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKNILLAVTGGIAAYKAIDLTSKLTQANYDVRVMLTDHAQEFVTPLAFQAISRNPVYTNTFIEENPEDIQHIALGDWADCIVVAPATANTIAKLSVGIADDIVTSTLLATETPKFIAPAMNVHMYENKRTQHNISVLKDDEYHFIEPGDGFLACGYIAKGRMEEPLQIVKIINDYFKDKNELSHISHTSFEGKHALVTAGPTIEVIDPVRFVSNRSSGKMGYAIAEALAKRGAKVTLVAGPTQLDNPENVEVIHVESAEEMFNAVTSRYEEQDIVVKAAAVSDYTPADVLNHKMKKQDGNLSVTFKRTKDILKYLGEHKTHQYLVGFAAETQNINAYAQDKLKRKNADVIISNNVGDQTIGFQSDDNELTMHFKDGQRINIKKGKKVQLAQQILDELETRWQ persistent 402 coaBC bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC 4.1.1.36,6.3.2.5 GO:0004632,GO:0004633,GO:0010181,GO:0015937,GO:0015941 WP_048762373.1 UPI00066097CF UniRef100_UPI00066097CF,UniRef50_W4QPQ9,UniRef90_A0A3S7GW15 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 118246 118458 . - . GCA_005502385.1_01066_gene GCA_005502385.1_01066 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLNPPLNQLQSQINSKYLIATTAAKRARELDEKPETALLNGYHSAKPVGEALEEIASGKISPVVPEEFQA . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 118246 118458 . - . GCA_005502385.1_01066_mRNA GCA_005502385.1_01066 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLNPPLNQLQSQINSKYLIATTAAKRARELDEKPETALLNGYHSAKPVGEALEEIASGKISPVVPEEFQA . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 118246 118458 . - 0 GCA_005502385.1_01066 GCA_005502385.1_01066_gene,GCA_005502385.1_01066_mRNA GCA_005502385.1_01066 DNA-directed RNA polymerase subunit omega GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLNPPLNQLQSQINSKYLIATTAAKRARELDEKPETALLNGYHSAKPVGEALEEIASGKISPVVPEEFQA persistent 70 rpoZ DNA-directed RNA polymerase subunit omega 2.7.7.6 GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351 COG1758,K WP_002448867.1 UPI00019FC8AF UniRef100_A0A4Q9X047,UniRef50_Q2G1T9,UniRef90_Q4L5R2 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 118458 119081 . - . GCA_005502385.1_01067_gene GCA_005502385.1_01067 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDNEKGLLIVLSGPSGVGKGTVRKEIFDDPTTSYKYSISMTTRQMREGEVNGVDYFFKTKEEFEALIQEDQFIEYAEYVGNYYGTPVQYVKDTMAEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDHLKERLIGRGTETDEKIQSRVNEARKEVEMMNLYDYVVVNDKVHLAKERIQSIVEAEHLKRERVEAIYRKMLLEAKK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 118458 119081 . - . GCA_005502385.1_01067_mRNA GCA_005502385.1_01067 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDNEKGLLIVLSGPSGVGKGTVRKEIFDDPTTSYKYSISMTTRQMREGEVNGVDYFFKTKEEFEALIQEDQFIEYAEYVGNYYGTPVQYVKDTMAEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDHLKERLIGRGTETDEKIQSRVNEARKEVEMMNLYDYVVVNDKVHLAKERIQSIVEAEHLKRERVEAIYRKMLLEAKK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 118458 119081 . - 0 GCA_005502385.1_01067 GCA_005502385.1_01067_gene,GCA_005502385.1_01067_mRNA GCA_005502385.1_01067 Guanylate kinase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDNEKGLLIVLSGPSGVGKGTVRKEIFDDPTTSYKYSISMTTRQMREGEVNGVDYFFKTKEEFEALIQEDQFIEYAEYVGNYYGTPVQYVKDTMAEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDHLKERLIGRGTETDEKIQSRVNEARKEVEMMNLYDYVVVNDKVHLAKERIQSIVEAEHLKRERVEAIYRKMLLEAKK persistent 207 gmk guanylate kinase 2.7.4.8 GO:0004385,GO:0005524,GO:0005829,GO:0006163 COG0194,F WP_048762371.1 UPI00065F7143 UniRef100_UPI00065F7143,UniRef50_O34328,UniRef90_P0C0M9 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 119240 120943 . + . GCA_005502385.1_01068_gene GCA_005502385.1_01068 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAYDGLFTKKIIESLQFLVTGRIHKINQPENDTIIMIIRQNRKNHHLLLSIHPNFSRMHLTNKKYDNPFDPPMFARVFRKHLEGGIVKSIRQIGNDRRVEIDIESKDEIGDTIYRTVILEIMGKHSNLILVDDQYKIIEGFKHLTPNTNQYRTVMPGFKYEAPPTQNKRNPYDISSDEVLKFVDFNAGKIAKQLLNAFEGFSPLITNEITNRYQFMNQDTLPQAFEEVIDQTLKVPVPVFHKNHETGKEDFYFMKLKQFSDDIVIYDSLHDLLDRYYDARGERERVKQRANDLVRFVQQQLQKYQHKLSKLIDEYESAKDKDTQQLYGELITANIYRIQQGDASINVLNYYTNEEVTIPLDPTKSPSVNAQYYYKQYNRMKTREKELDLQIALTRENIDYFANIEQQLEHITVDEIDDIRDELAEQGFMKQRKNTKKKKQDKIHLQTYISSDGDTILVGKNNKQNDYLTNRKAQKSHIWFHTKDIPGSHVVILNDAPSETTIKEAAMLAGYFSKAGNSGQIPVDYTEIKNVHKPSGAKPGFVTYDNQKTLYATPDYDQIQRMKQDKN . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 119240 120943 . + . GCA_005502385.1_01068_mRNA GCA_005502385.1_01068 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAYDGLFTKKIIESLQFLVTGRIHKINQPENDTIIMIIRQNRKNHHLLLSIHPNFSRMHLTNKKYDNPFDPPMFARVFRKHLEGGIVKSIRQIGNDRRVEIDIESKDEIGDTIYRTVILEIMGKHSNLILVDDQYKIIEGFKHLTPNTNQYRTVMPGFKYEAPPTQNKRNPYDISSDEVLKFVDFNAGKIAKQLLNAFEGFSPLITNEITNRYQFMNQDTLPQAFEEVIDQTLKVPVPVFHKNHETGKEDFYFMKLKQFSDDIVIYDSLHDLLDRYYDARGERERVKQRANDLVRFVQQQLQKYQHKLSKLIDEYESAKDKDTQQLYGELITANIYRIQQGDASINVLNYYTNEEVTIPLDPTKSPSVNAQYYYKQYNRMKTREKELDLQIALTRENIDYFANIEQQLEHITVDEIDDIRDELAEQGFMKQRKNTKKKKQDKIHLQTYISSDGDTILVGKNNKQNDYLTNRKAQKSHIWFHTKDIPGSHVVILNDAPSETTIKEAAMLAGYFSKAGNSGQIPVDYTEIKNVHKPSGAKPGFVTYDNQKTLYATPDYDQIQRMKQDKN . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 119240 120943 . + 0 GCA_005502385.1_01068 GCA_005502385.1_01068_gene,GCA_005502385.1_01068_mRNA GCA_005502385.1_01068 Rqc2 RqcH GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAYDGLFTKKIIESLQFLVTGRIHKINQPENDTIIMIIRQNRKNHHLLLSIHPNFSRMHLTNKKYDNPFDPPMFARVFRKHLEGGIVKSIRQIGNDRRVEIDIESKDEIGDTIYRTVILEIMGKHSNLILVDDQYKIIEGFKHLTPNTNQYRTVMPGFKYEAPPTQNKRNPYDISSDEVLKFVDFNAGKIAKQLLNAFEGFSPLITNEITNRYQFMNQDTLPQAFEEVIDQTLKVPVPVFHKNHETGKEDFYFMKLKQFSDDIVIYDSLHDLLDRYYDARGERERVKQRANDLVRFVQQQLQKYQHKLSKLIDEYESAKDKDTQQLYGELITANIYRIQQGDASINVLNYYTNEEVTIPLDPTKSPSVNAQYYYKQYNRMKTREKELDLQIALTRENIDYFANIEQQLEHITVDEIDDIRDELAEQGFMKQRKNTKKKKQDKIHLQTYISSDGDTILVGKNNKQNDYLTNRKAQKSHIWFHTKDIPGSHVVILNDAPSETTIKEAAMLAGYFSKAGNSGQIPVDYTEIKNVHKPSGAKPGFVTYDNQKTLYATPDYDQIQRMKQDKN persistent 567 rqcH Rqc2-like protein RqcH WP_019835569.1 UPI000366FC0B UniRef100_A0A3S7GST7,UniRef50_Q5HPY2,UniRef90_A0A974L0B4 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 121005 121409 . - . GCA_005502385.1_01069_gene GCA_005502385.1_01069 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEIPKVTPFLMFNNQAEEAVNLYTSLFKNSEILTMVKYGEDGPGEPGTVQHSIFTLNGQVFMAIDADNGEELPMNPSISLYITVEDAMEMERLFNGLKKEGAILMAKTSMPPFREFAWVQDKFGVSFQLALPEK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 121005 121409 . - . GCA_005502385.1_01069_mRNA GCA_005502385.1_01069 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEIPKVTPFLMFNNQAEEAVNLYTSLFKNSEILTMVKYGEDGPGEPGTVQHSIFTLNGQVFMAIDADNGEELPMNPSISLYITVEDAMEMERLFNGLKKEGAILMAKTSMPPFREFAWVQDKFGVSFQLALPEK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 121005 121409 . - 0 GCA_005502385.1_01069 GCA_005502385.1_01069_gene,GCA_005502385.1_01069_mRNA GCA_005502385.1_01069 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEIPKVTPFLMFNNQAEEAVNLYTSLFKNSEILTMVKYGEDGPGEPGTVQHSIFTLNGQVFMAIDADNGEELPMNPSISLYITVEDAMEMERLFNGLKKEGAILMAKTSMPPFREFAWVQDKFGVSFQLALPEK persistent 134 PhnB-like domain-containing protein COG3865,R UniRef50_Q2G1U2,UniRef90_A0AAE5MYS1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 121729 121944 . - . GCA_005502385.1_01070_gene GCA_005502385.1_01070 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKDKDNNAFYNQLKHVNQFLYSEKEFKQTAHVLTIKESIKHMHHAQMESFEHTSDFFKKAKARLRQKDKI . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 121729 121944 . - . GCA_005502385.1_01070_mRNA GCA_005502385.1_01070 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKDKDNNAFYNQLKHVNQFLYSEKEFKQTAHVLTIKESIKHMHHAQMESFEHTSDFFKKAKARLRQKDKI . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 121729 121944 . - 0 GCA_005502385.1_01070 GCA_005502385.1_01070_gene,GCA_005502385.1_01070_mRNA GCA_005502385.1_01070 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKDKDNNAFYNQLKHVNQFLYSEKEFKQTAHVLTIKESIKHMHHAQMESFEHTSDFFKKAKARLRQKDKI persistent 71 hypothetical protein UPI000372859C UniRef100_A0A4Q9WSL0,UniRef50_A0A4Q9WSL0,UniRef90_A0A4Q9WSL0 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 121968 122576 . - . GCA_005502385.1_01071_gene GCA_005502385.1_01071 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKHIAKSLLDIEAVSLSPNDLFTWSSGIKSPIYCDNRITLGYPKVRQDIRDGLSELITEHFDNVEVISGTATAGIPHAAYISEKLNLPMNYVRSKSKSHGKQNQIEGAQSKNKKVVVVEDLISTGGSSITAVEALREAGAEVVGVVAIFTYGLAKADDMFKQANLPFYTLSNYNELIEVAKEEGKISENDIQTLVDWRDNL . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 121968 122576 . - . GCA_005502385.1_01071_mRNA GCA_005502385.1_01071 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKHIAKSLLDIEAVSLSPNDLFTWSSGIKSPIYCDNRITLGYPKVRQDIRDGLSELITEHFDNVEVISGTATAGIPHAAYISEKLNLPMNYVRSKSKSHGKQNQIEGAQSKNKKVVVVEDLISTGGSSITAVEALREAGAEVVGVVAIFTYGLAKADDMFKQANLPFYTLSNYNELIEVAKEEGKISENDIQTLVDWRDNL . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 121968 122576 . - 0 GCA_005502385.1_01071 GCA_005502385.1_01071_gene,GCA_005502385.1_01071_mRNA GCA_005502385.1_01071 Orotate phosphoribosyltransferase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKHIAKSLLDIEAVSLSPNDLFTWSSGIKSPIYCDNRITLGYPKVRQDIRDGLSELITEHFDNVEVISGTATAGIPHAAYISEKLNLPMNYVRSKSKSHGKQNQIEGAQSKNKKVVVVEDLISTGGSSITAVEALREAGAEVVGVVAIFTYGLAKADDMFKQANLPFYTLSNYNELIEVAKEEGKISENDIQTLVDWRDNL persistent 202 Orotate phosphoribosyltransferase WP_017174562.1 UPI000314BE91 UniRef100_A0A4Q9WSL7,UniRef50_P58856,UniRef90_A0A4Q9WSL7 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 122578 123270 . - . GCA_005502385.1_01072_gene GCA_005502385.1_01072 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRDLPIIALDFDSEDHVLDFLDQFDEPLFVKVGMELYYQTGPALIKKIKERGHDIFLDLKLHDIPNTVQKAMEGLGKLNVDLVNVHAAGGTEMMKHAVKGLRKYNETTKIIAVTQLTSTTEEMLHQEQNIQTSIEEAVLNYAKLAQESGLDGVVCSPLEAKLLTKSLGSDFLKVTPGIRPKGAAVNDQKRITTPEDAKQLGSTHIVVGRPITQSEHPQESYTKIKESWLS . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 122578 123270 . - . GCA_005502385.1_01072_mRNA GCA_005502385.1_01072 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRDLPIIALDFDSEDHVLDFLDQFDEPLFVKVGMELYYQTGPALIKKIKERGHDIFLDLKLHDIPNTVQKAMEGLGKLNVDLVNVHAAGGTEMMKHAVKGLRKYNETTKIIAVTQLTSTTEEMLHQEQNIQTSIEEAVLNYAKLAQESGLDGVVCSPLEAKLLTKSLGSDFLKVTPGIRPKGAAVNDQKRITTPEDAKQLGSTHIVVGRPITQSEHPQESYTKIKESWLS . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 122578 123270 . - 0 GCA_005502385.1_01072 GCA_005502385.1_01072_gene,GCA_005502385.1_01072_mRNA GCA_005502385.1_01072 Orotidine 5'-phosphate decarboxylase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRDLPIIALDFDSEDHVLDFLDQFDEPLFVKVGMELYYQTGPALIKKIKERGHDIFLDLKLHDIPNTVQKAMEGLGKLNVDLVNVHAAGGTEMMKHAVKGLRKYNETTKIIAVTQLTSTTEEMLHQEQNIQTSIEEAVLNYAKLAQESGLDGVVCSPLEAKLLTKSLGSDFLKVTPGIRPKGAAVNDQKRITTPEDAKQLGSTHIVVGRPITQSEHPQESYTKIKESWLS persistent 230 pyrF orotidine-5'-phosphate decarboxylase 4.1.1.23 GO:0004590,GO:0006207,GO:0044205 WP_017174561.1 UPI0002D41EA2 UniRef100_A0A4Q9WUR4,UniRef50_P0CB75,UniRef90_A0A974KZV4 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 123371 126544 . - . GCA_005502385.1_01073_gene GCA_005502385.1_01073 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPKRDDIKTILVIGSGPIIIGQAAEFDYAGTQACLALKEEGYRVILVNSNPATIMTDKEIADKVYIEPLTHDFIARIIRKEQPDALLPTLGGQTGLNMAIQLHDSGVLKANNVELLGTKLESIQQAEDRELFRSLMNELDVPVPESDIVNTVEQAFAFKEQVGYPLIVRPAFTMGGTGGGICHNDEELKEVVSNGLHYSPATQCLIEKSIAGYKEIEYEVMRDKNDNAIVVCNMENIDPVGIHTGDSVVVAPSQTLSDVEYQMLRDVSLKVIRALGIEGGCNVQLALDPYSLNYYIIEVNPRVSRSSALASKATGYPIAKLAAKIAVGLTLDEMLNPITGTSYAAFEPTLDYVISKIPRFPFDKFEKGERELGTQMKATGEVMAIGRTYEESLLKAIRSLEYGVHHLGLPNGESYDLDYIKERISHQDDERLFFIGEAIRRGTSLQEIHEMTKIDYFFLNKFLNIIHIEHELKAHPGDLEYLKYAKDYGFSDKVIAHRFDMTEEEVYQLRQDNDIKPVYKMVDTCAAEFESSTPYYYGTYETENESIVTDKEKILVLGSGPIRIGQGVEFDYATVHAVWAIQNAGYEAIIVNNNPETVSTDFSISDKLYFEPLTEEDVMNIINLEQPKGVVVQFGGQTAINLADKLAKHGVKILGTSLEDLNRAEDRKEFEALLRKIDVPQPKGKTATSPKEALENAREIGYPVVVRPSYVLGGRAMEIVNSDAELKDYMEQAVKASPEHPVLVDRYLTGKEIEVDAISDGETVIIPGIMEHIERAGVHSGDSIAVYPPQTLSDEEINTLEDYTIKLAKGLNIVGLINIQFVIAHDGVYVLEVNPRASRTVPFLSKITDIQMAQLAMQAIMGTKLKDLGYQQGIQPYSEGVFVKAPVFSFNKLKNVDVTLGPEMKSTGEVMGKDLTLEKALYKGLTGSGVEVKDHGTVLMTVSDKDKEEIVDIAHRLNEVGYKILATQGTAQKLEAHNIPVEVVGKIGGEDDLLTRIQNGDVQIVINTMTKGKEVERDGFQIRRTTVENGVPCLTSLDTASALTNVIESMTFSMRNM . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 123371 126544 . - . GCA_005502385.1_01073_mRNA GCA_005502385.1_01073 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPKRDDIKTILVIGSGPIIIGQAAEFDYAGTQACLALKEEGYRVILVNSNPATIMTDKEIADKVYIEPLTHDFIARIIRKEQPDALLPTLGGQTGLNMAIQLHDSGVLKANNVELLGTKLESIQQAEDRELFRSLMNELDVPVPESDIVNTVEQAFAFKEQVGYPLIVRPAFTMGGTGGGICHNDEELKEVVSNGLHYSPATQCLIEKSIAGYKEIEYEVMRDKNDNAIVVCNMENIDPVGIHTGDSVVVAPSQTLSDVEYQMLRDVSLKVIRALGIEGGCNVQLALDPYSLNYYIIEVNPRVSRSSALASKATGYPIAKLAAKIAVGLTLDEMLNPITGTSYAAFEPTLDYVISKIPRFPFDKFEKGERELGTQMKATGEVMAIGRTYEESLLKAIRSLEYGVHHLGLPNGESYDLDYIKERISHQDDERLFFIGEAIRRGTSLQEIHEMTKIDYFFLNKFLNIIHIEHELKAHPGDLEYLKYAKDYGFSDKVIAHRFDMTEEEVYQLRQDNDIKPVYKMVDTCAAEFESSTPYYYGTYETENESIVTDKEKILVLGSGPIRIGQGVEFDYATVHAVWAIQNAGYEAIIVNNNPETVSTDFSISDKLYFEPLTEEDVMNIINLEQPKGVVVQFGGQTAINLADKLAKHGVKILGTSLEDLNRAEDRKEFEALLRKIDVPQPKGKTATSPKEALENAREIGYPVVVRPSYVLGGRAMEIVNSDAELKDYMEQAVKASPEHPVLVDRYLTGKEIEVDAISDGETVIIPGIMEHIERAGVHSGDSIAVYPPQTLSDEEINTLEDYTIKLAKGLNIVGLINIQFVIAHDGVYVLEVNPRASRTVPFLSKITDIQMAQLAMQAIMGTKLKDLGYQQGIQPYSEGVFVKAPVFSFNKLKNVDVTLGPEMKSTGEVMGKDLTLEKALYKGLTGSGVEVKDHGTVLMTVSDKDKEEIVDIAHRLNEVGYKILATQGTAQKLEAHNIPVEVVGKIGGEDDLLTRIQNGDVQIVINTMTKGKEVERDGFQIRRTTVENGVPCLTSLDTASALTNVIESMTFSMRNM . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 123371 126544 . - 0 GCA_005502385.1_01073 GCA_005502385.1_01073_gene,GCA_005502385.1_01073_mRNA GCA_005502385.1_01073 Carbamoyl-phosphate synthase large chain GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPKRDDIKTILVIGSGPIIIGQAAEFDYAGTQACLALKEEGYRVILVNSNPATIMTDKEIADKVYIEPLTHDFIARIIRKEQPDALLPTLGGQTGLNMAIQLHDSGVLKANNVELLGTKLESIQQAEDRELFRSLMNELDVPVPESDIVNTVEQAFAFKEQVGYPLIVRPAFTMGGTGGGICHNDEELKEVVSNGLHYSPATQCLIEKSIAGYKEIEYEVMRDKNDNAIVVCNMENIDPVGIHTGDSVVVAPSQTLSDVEYQMLRDVSLKVIRALGIEGGCNVQLALDPYSLNYYIIEVNPRVSRSSALASKATGYPIAKLAAKIAVGLTLDEMLNPITGTSYAAFEPTLDYVISKIPRFPFDKFEKGERELGTQMKATGEVMAIGRTYEESLLKAIRSLEYGVHHLGLPNGESYDLDYIKERISHQDDERLFFIGEAIRRGTSLQEIHEMTKIDYFFLNKFLNIIHIEHELKAHPGDLEYLKYAKDYGFSDKVIAHRFDMTEEEVYQLRQDNDIKPVYKMVDTCAAEFESSTPYYYGTYETENESIVTDKEKILVLGSGPIRIGQGVEFDYATVHAVWAIQNAGYEAIIVNNNPETVSTDFSISDKLYFEPLTEEDVMNIINLEQPKGVVVQFGGQTAINLADKLAKHGVKILGTSLEDLNRAEDRKEFEALLRKIDVPQPKGKTATSPKEALENAREIGYPVVVRPSYVLGGRAMEIVNSDAELKDYMEQAVKASPEHPVLVDRYLTGKEIEVDAISDGETVIIPGIMEHIERAGVHSGDSIAVYPPQTLSDEEINTLEDYTIKLAKGLNIVGLINIQFVIAHDGVYVLEVNPRASRTVPFLSKITDIQMAQLAMQAIMGTKLKDLGYQQGIQPYSEGVFVKAPVFSFNKLKNVDVTLGPEMKSTGEVMGKDLTLEKALYKGLTGSGVEVKDHGTVLMTVSDKDKEEIVDIAHRLNEVGYKILATQGTAQKLEAHNIPVEVVGKIGGEDDLLTRIQNGDVQIVINTMTKGKEVERDGFQIRRTTVENGVPCLTSLDTASALTNVIESMTFSMRNM persistent 1057 carB carbamoyl-phosphate synthase large subunit 6.3.4.16,6.3.5.5 GO:0004087,GO:0004088,GO:0005524,GO:0005737,GO:0006526,GO:0006541,GO:0008152,GO:0044205,GO:0046872 COG0458,EF UniRef50_P25994,UniRef90_P63739 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 126537 127643 . - . GCA_005502385.1_01074_gene GCA_005502385.1_01074 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MFERRYLVFEDGSYYEGYKLGSDQLSIGEIVFNTAMTGYQETISDPSYTGQIVTFTYPLIGNYGINRDDFESLTPTLNGVVVKEASTHPSNFRKQKTLHEVLVQYQIPGISGVDTRSITRKIRKYGVLKAGFTDNKEEIESLAANLKTAELPRDEVTTVSTKTPYVSTGSDLSVVLLDFGKKQNIVRELNSRGCNVTVVPYDTSAEEILAMSPDGVMLSNGPGDPEEVNVALDMIKGVLGNIPFFGICLGHQLFALSQGAKAFKMKFGHRGANHPVKDLRTGKVDITSQNHGYAIDKDSLENTDLEVTHIALNDGTVEGLRHKTLPAFSVQYHPEARPGPSDSNYLFDEFLDMMRDFKDNKKESKTNA . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 126537 127643 . - . GCA_005502385.1_01074_mRNA GCA_005502385.1_01074 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MFERRYLVFEDGSYYEGYKLGSDQLSIGEIVFNTAMTGYQETISDPSYTGQIVTFTYPLIGNYGINRDDFESLTPTLNGVVVKEASTHPSNFRKQKTLHEVLVQYQIPGISGVDTRSITRKIRKYGVLKAGFTDNKEEIESLAANLKTAELPRDEVTTVSTKTPYVSTGSDLSVVLLDFGKKQNIVRELNSRGCNVTVVPYDTSAEEILAMSPDGVMLSNGPGDPEEVNVALDMIKGVLGNIPFFGICLGHQLFALSQGAKAFKMKFGHRGANHPVKDLRTGKVDITSQNHGYAIDKDSLENTDLEVTHIALNDGTVEGLRHKTLPAFSVQYHPEARPGPSDSNYLFDEFLDMMRDFKDNKKESKTNA . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 126537 127643 . - 0 GCA_005502385.1_01074 GCA_005502385.1_01074_gene,GCA_005502385.1_01074_mRNA GCA_005502385.1_01074 Carbamoyl-phosphate synthase small chain GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MFERRYLVFEDGSYYEGYKLGSDQLSIGEIVFNTAMTGYQETISDPSYTGQIVTFTYPLIGNYGINRDDFESLTPTLNGVVVKEASTHPSNFRKQKTLHEVLVQYQIPGISGVDTRSITRKIRKYGVLKAGFTDNKEEIESLAANLKTAELPRDEVTTVSTKTPYVSTGSDLSVVLLDFGKKQNIVRELNSRGCNVTVVPYDTSAEEILAMSPDGVMLSNGPGDPEEVNVALDMIKGVLGNIPFFGICLGHQLFALSQGAKAFKMKFGHRGANHPVKDLRTGKVDITSQNHGYAIDKDSLENTDLEVTHIALNDGTVEGLRHKTLPAFSVQYHPEARPGPSDSNYLFDEFLDMMRDFKDNKKESKTNA persistent 368 carbamoyl phosphate synthase small subunit GO:0004088,GO:0006541 WP_017174559.1 UPI0002E0DD77 UniRef100_A0A3S7GT80,UniRef50_P25993,UniRef90_A0A380G1S0 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 127645 128919 . - . GCA_005502385.1_01075_gene GCA_005502385.1_01075 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKLIKNAKILDNGELKSTSILIDGQYIKEMNENINIDEGTEVIDANGQFVAPGLVDVHVHLREPGGEHKETIETGTKAAARGGFTTVCPMPNTRPVPDTVEHMDQLQSLIKENAQVRVLPYASITIRQAGKEHVDFEALSKEGAFAFTDDGVGVQESAMMYEAMQQAAKLNKAVVAHCEDNSLIYGGAMHQGKRSEELGIPGIPNICESVQIARDVLLAEAANCHYHVCHVSTKESVRAIRDAKAAGIHVTAEVTPHHLLLTEDDVPGDNAIFKMNPPLRSKEDRDALLEGLLDGTIDCIATDHAPHAKEEKAQPMTKAPFGIVGSETAFPLLYTHFVKNGDWSLQQLVDYLTIKPAQIFDLPYGKLEEGSYADLTIINLDEEREIRGEDFLSKADNTPFIGYKVYGNPVLTMVEGEVKFKEDK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 127645 128919 . - . GCA_005502385.1_01075_mRNA GCA_005502385.1_01075 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKLIKNAKILDNGELKSTSILIDGQYIKEMNENINIDEGTEVIDANGQFVAPGLVDVHVHLREPGGEHKETIETGTKAAARGGFTTVCPMPNTRPVPDTVEHMDQLQSLIKENAQVRVLPYASITIRQAGKEHVDFEALSKEGAFAFTDDGVGVQESAMMYEAMQQAAKLNKAVVAHCEDNSLIYGGAMHQGKRSEELGIPGIPNICESVQIARDVLLAEAANCHYHVCHVSTKESVRAIRDAKAAGIHVTAEVTPHHLLLTEDDVPGDNAIFKMNPPLRSKEDRDALLEGLLDGTIDCIATDHAPHAKEEKAQPMTKAPFGIVGSETAFPLLYTHFVKNGDWSLQQLVDYLTIKPAQIFDLPYGKLEEGSYADLTIINLDEEREIRGEDFLSKADNTPFIGYKVYGNPVLTMVEGEVKFKEDK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 127645 128919 . - 0 GCA_005502385.1_01075 GCA_005502385.1_01075_gene,GCA_005502385.1_01075_mRNA GCA_005502385.1_01075 Dihydroorotase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKLIKNAKILDNGELKSTSILIDGQYIKEMNENINIDEGTEVIDANGQFVAPGLVDVHVHLREPGGEHKETIETGTKAAARGGFTTVCPMPNTRPVPDTVEHMDQLQSLIKENAQVRVLPYASITIRQAGKEHVDFEALSKEGAFAFTDDGVGVQESAMMYEAMQQAAKLNKAVVAHCEDNSLIYGGAMHQGKRSEELGIPGIPNICESVQIARDVLLAEAANCHYHVCHVSTKESVRAIRDAKAAGIHVTAEVTPHHLLLTEDDVPGDNAIFKMNPPLRSKEDRDALLEGLLDGTIDCIATDHAPHAKEEKAQPMTKAPFGIVGSETAFPLLYTHFVKNGDWSLQQLVDYLTIKPAQIFDLPYGKLEEGSYADLTIINLDEEREIRGEDFLSKADNTPFIGYKVYGNPVLTMVEGEVKFKEDK persistent 424 allB dihydroorotase 3.5.2.3 GO:0004151,GO:0006221,GO:0046872 COG0044,F WP_017174558.1 UPI0002E31760 UniRef100_A0A4Q9WTV0,UniRef50_Q81WF0,UniRef90_A0A640MU02 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 128922 129815 . - . GCA_005502385.1_01076_gene GCA_005502385.1_01076 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKNLFSMEYLTNDDIFNLIQTASRFKSGKEIVPQYEGKYVSNLFFENSTRTKCSFEVAELNLGLKQVNFETSTSSVQKGESLYDTCKTLESIGVNLLVIRHPQNAYYEELENLNIPIANAGDGSGQHPTQSLLDIMTIYEEYETFEGLNILICGDIKNSRVARSNYTSLTSLGAKVMFSSPNEWVDETLDAPYVNIDDVIDKVDIIMLLRVQHERHGITDEANFKADHYHEQYGLTKERYRRLKDDAIVMHPAPVNRGVEIDSELVEAPKSRIFKQMENGMYLRMAVIDKLLSRKGE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 128922 129815 . - . GCA_005502385.1_01076_mRNA GCA_005502385.1_01076 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKNLFSMEYLTNDDIFNLIQTASRFKSGKEIVPQYEGKYVSNLFFENSTRTKCSFEVAELNLGLKQVNFETSTSSVQKGESLYDTCKTLESIGVNLLVIRHPQNAYYEELENLNIPIANAGDGSGQHPTQSLLDIMTIYEEYETFEGLNILICGDIKNSRVARSNYTSLTSLGAKVMFSSPNEWVDETLDAPYVNIDDVIDKVDIIMLLRVQHERHGITDEANFKADHYHEQYGLTKERYRRLKDDAIVMHPAPVNRGVEIDSELVEAPKSRIFKQMENGMYLRMAVIDKLLSRKGE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 128922 129815 . - 0 GCA_005502385.1_01076 GCA_005502385.1_01076_gene,GCA_005502385.1_01076_mRNA GCA_005502385.1_01076 Aspartate carbamoyltransferase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKNLFSMEYLTNDDIFNLIQTASRFKSGKEIVPQYEGKYVSNLFFENSTRTKCSFEVAELNLGLKQVNFETSTSSVQKGESLYDTCKTLESIGVNLLVIRHPQNAYYEELENLNIPIANAGDGSGQHPTQSLLDIMTIYEEYETFEGLNILICGDIKNSRVARSNYTSLTSLGAKVMFSSPNEWVDETLDAPYVNIDDVIDKVDIIMLLRVQHERHGITDEANFKADHYHEQYGLTKERYRRLKDDAIVMHPAPVNRGVEIDSELVEAPKSRIFKQMENGMYLRMAVIDKLLSRKGE persistent 297 aspartate carbamoyltransferase catalytic subunit 2.1.3.2 GO:0004070,GO:0006207,GO:0006520,GO:0016597 WP_017174557.1 UPI0002D7C1C8 UniRef100_A0A4Q9WSM2,UniRef50_P05654,UniRef90_A0A4Q9WSM2 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 129841 131154 . - . GCA_005502385.1_01077_gene GCA_005502385.1_01077 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MENEQMFKRTVKPVLDVKDKPKPAQWAFLSLQHLFAMFGSTVLVPFLTGLPISAALLASGIGTLLYILITKAKIPAYLGSSFAFITPIITGLSTHSLGDMLVALFASGVMYIVIGIFIKLSGTGWLMHLLPPVVVGPVIMVIGLSLAPTAVNMAMYENSGDMKGYNLSYLLVALVTLLVTIIVQGFFKGFLSLIPVLIGIIVGYIVSIFVGIVNFKPIAKASWLDFPDIYLPFKDYVPSIHIGLILVMLPIVFVTVSEHIGHQMVINKIVGRNFFENPGLHRSIIGDGVSTMFASIIGGPPSTTYGENIGVLAITKIYSIYVIGGAAVIAIILSFIGKFSALISSIPTPVMGGVSILLFGIIAASGLRMLVESRVDFASNRNLVIASVVLVVGIGNLLINLKSLGVNLQIEGMALAALSGIILNLILPKEKEESDIK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 129841 131154 . - . GCA_005502385.1_01077_mRNA GCA_005502385.1_01077 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MENEQMFKRTVKPVLDVKDKPKPAQWAFLSLQHLFAMFGSTVLVPFLTGLPISAALLASGIGTLLYILITKAKIPAYLGSSFAFITPIITGLSTHSLGDMLVALFASGVMYIVIGIFIKLSGTGWLMHLLPPVVVGPVIMVIGLSLAPTAVNMAMYENSGDMKGYNLSYLLVALVTLLVTIIVQGFFKGFLSLIPVLIGIIVGYIVSIFVGIVNFKPIAKASWLDFPDIYLPFKDYVPSIHIGLILVMLPIVFVTVSEHIGHQMVINKIVGRNFFENPGLHRSIIGDGVSTMFASIIGGPPSTTYGENIGVLAITKIYSIYVIGGAAVIAIILSFIGKFSALISSIPTPVMGGVSILLFGIIAASGLRMLVESRVDFASNRNLVIASVVLVVGIGNLLINLKSLGVNLQIEGMALAALSGIILNLILPKEKEESDIK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 129841 131154 . - 0 GCA_005502385.1_01077 GCA_005502385.1_01077_gene,GCA_005502385.1_01077_mRNA GCA_005502385.1_01077 Uracil permease GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MENEQMFKRTVKPVLDVKDKPKPAQWAFLSLQHLFAMFGSTVLVPFLTGLPISAALLASGIGTLLYILITKAKIPAYLGSSFAFITPIITGLSTHSLGDMLVALFASGVMYIVIGIFIKLSGTGWLMHLLPPVVVGPVIMVIGLSLAPTAVNMAMYENSGDMKGYNLSYLLVALVTLLVTIIVQGFFKGFLSLIPVLIGIIVGYIVSIFVGIVNFKPIAKASWLDFPDIYLPFKDYVPSIHIGLILVMLPIVFVTVSEHIGHQMVINKIVGRNFFENPGLHRSIIGDGVSTMFASIIGGPPSTTYGENIGVLAITKIYSIYVIGGAAVIAIILSFIGKFSALISSIPTPVMGGVSILLFGIIAASGLRMLVESRVDFASNRNLVIASVVLVVGIGNLLINLKSLGVNLQIEGMALAALSGIILNLILPKEKEESDIK persistent 437 uraA Uracil permease COG2233,F WP_048680024.1 UPI00065F858D UniRef100_UPI00065F858D,UniRef50_P39766,UniRef90_Q5HPZ2 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 131379 131906 . - . GCA_005502385.1_01078_gene GCA_005502385.1_01078 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSERIIMDEAAIQRTVTRIAHEILEYNKGTEQLVLLGIKTRGEFLARRIQEKIKQIEHHVVPTGTIDITHFRDDIENSKKPITKDAIEIDQDVTDKIVIIIDDVLYTGRTVRASLDAILLHSRPIKIGLAALVDRGHRELPIRADFVGKNIPTAKDEAVSVYLEEIDDRNAVVIE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 131379 131906 . - . GCA_005502385.1_01078_mRNA GCA_005502385.1_01078 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSERIIMDEAAIQRTVTRIAHEILEYNKGTEQLVLLGIKTRGEFLARRIQEKIKQIEHHVVPTGTIDITHFRDDIENSKKPITKDAIEIDQDVTDKIVIIIDDVLYTGRTVRASLDAILLHSRPIKIGLAALVDRGHRELPIRADFVGKNIPTAKDEAVSVYLEEIDDRNAVVIE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 131379 131906 . - 0 GCA_005502385.1_01078 GCA_005502385.1_01078_gene,GCA_005502385.1_01078_mRNA GCA_005502385.1_01078 Bifunctional protein PyrR GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSERIIMDEAAIQRTVTRIAHEILEYNKGTEQLVLLGIKTRGEFLARRIQEKIKQIEHHVVPTGTIDITHFRDDIENSKKPITKDAIEIDQDVTDKIVIIIDDVLYTGRTVRASLDAILLHSRPIKIGLAALVDRGHRELPIRADFVGKNIPTAKDEAVSVYLEEIDDRNAVVIE persistent 175 pyrR bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR 2.4.2.9 WP_017174555.1 UPI0002D9B283 UniRef100_A0A4Q9WTF9,UniRef50_Q49WX9,UniRef90_A0A4Q9WTF9 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 131923 132082 . - . GCA_005502385.1_01079_gene GCA_005502385.1_01079 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 131923 132082 . - . GCA_005502385.1_01079_mRNA GCA_005502385.1_01079 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 . . . . . . . GCA_005502385.1|SCOV01000002.1 Infernal:001001 misc_RNA 131923 132082 60.6 - . GCA_005502385.1_01079 GCA_005502385.1_01079_gene,GCA_005502385.1_01079_mRNA GCA_005502385.1_01079 PyrR GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 132174 133091 . - . GCA_005502385.1_01080_gene GCA_005502385.1_01080 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 METYEYKIEDEALVGQRIDKLLSDFNSEWSRSQLQDWIKNDLVTVNGKIIKSNYKVKLNDEIQVTEKEVVEADILPENLNLDIYYEDEDVAIVYKPKGMVVHPSPGHYTGTLVNGLMYQIKDLSGINGEIRPGIVHRIDKDTSGLLMVAKNDIAHRGLVEQLMDKTVKRKYTALVHGNIPHDYGTIDAPIGRNKKDRQSMDVVDDGKEAVTHFNVIEHFNDYTLIECQLETGRTHQIRVHMKYIGFPLVGDPKYGPRKTLDIGGQALHAGVIGFEHPVTHEYIERHAELPQEFQSLLEDIRLRES . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 132174 133091 . - . GCA_005502385.1_01080_mRNA GCA_005502385.1_01080 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 METYEYKIEDEALVGQRIDKLLSDFNSEWSRSQLQDWIKNDLVTVNGKIIKSNYKVKLNDEIQVTEKEVVEADILPENLNLDIYYEDEDVAIVYKPKGMVVHPSPGHYTGTLVNGLMYQIKDLSGINGEIRPGIVHRIDKDTSGLLMVAKNDIAHRGLVEQLMDKTVKRKYTALVHGNIPHDYGTIDAPIGRNKKDRQSMDVVDDGKEAVTHFNVIEHFNDYTLIECQLETGRTHQIRVHMKYIGFPLVGDPKYGPRKTLDIGGQALHAGVIGFEHPVTHEYIERHAELPQEFQSLLEDIRLRES . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 132174 133091 . - 0 GCA_005502385.1_01080 GCA_005502385.1_01080_gene,GCA_005502385.1_01080_mRNA GCA_005502385.1_01080 Ribosomal large subunit pseudouridine synthase D GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 METYEYKIEDEALVGQRIDKLLSDFNSEWSRSQLQDWIKNDLVTVNGKIIKSNYKVKLNDEIQVTEKEVVEADILPENLNLDIYYEDEDVAIVYKPKGMVVHPSPGHYTGTLVNGLMYQIKDLSGINGEIRPGIVHRIDKDTSGLLMVAKNDIAHRGLVEQLMDKTVKRKYTALVHGNIPHDYGTIDAPIGRNKKDRQSMDVVDDGKEAVTHFNVIEHFNDYTLIECQLETGRTHQIRVHMKYIGFPLVGDPKYGPRKTLDIGGQALHAGVIGFEHPVTHEYIERHAELPQEFQSLLEDIRLRES persistent 305 rluA Pseudouridine synthase 5.4.99.23 COG0564,J WP_017174554.1 UPI000306C5C6 UniRef100_A0A4V2KXF5,UniRef50_A0A2M9MVX9,UniRef90_A0A2J8BE99 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 133103 133579 . - . GCA_005502385.1_01081_gene GCA_005502385.1_01081 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKKYYIGLSLIVAIVILIIDQLTKKIITAIMNIGDSYEVIPHFLNITSHRNNGAAWGILSGKMGFFYIITLIILAVLIIFYIKETKYNAFMQVAISLLFAGALGNFIDRLFNGEVVDFIDTNIFGYDFPIFNIADSSLTIGVIFVIIALVKDATKKE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 133103 133579 . - . GCA_005502385.1_01081_mRNA GCA_005502385.1_01081 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKKYYIGLSLIVAIVILIIDQLTKKIITAIMNIGDSYEVIPHFLNITSHRNNGAAWGILSGKMGFFYIITLIILAVLIIFYIKETKYNAFMQVAISLLFAGALGNFIDRLFNGEVVDFIDTNIFGYDFPIFNIADSSLTIGVIFVIIALVKDATKKE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 133103 133579 . - 0 GCA_005502385.1_01081 GCA_005502385.1_01081_gene,GCA_005502385.1_01081_mRNA GCA_005502385.1_01081 Lipoprotein signal peptidase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKKYYIGLSLIVAIVILIIDQLTKKIITAIMNIGDSYEVIPHFLNITSHRNNGAAWGILSGKMGFFYIITLIILAVLIIFYIKETKYNAFMQVAISLLFAGALGNFIDRLFNGEVVDFIDTNIFGYDFPIFNIADSSLTIGVIFVIIALVKDATKKE persistent 158 lspA signal peptidase II 3.4.23.36 GO:0004190,GO:0005886,GO:0006508,GO:0009306 WP_048762366.1 UPI0006608778 UniRef100_UPI0006608778,UniRef50_Q8CPK0,UniRef90_A0A657M522 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 133664 134017 . - . GCA_005502385.1_01082_gene GCA_005502385.1_01082 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKYNTYAKGQCTYYVFDRVKEDHHLISNQWGDAKHWANKAKKQGYTVNENPTKGSILHYPKGKHGHVAYVEQVNNDGSLIVSDMNFRKPYEITTRFVDVDQVDQFNYIHPKSNTNMT . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 133664 134017 . - . GCA_005502385.1_01082_mRNA GCA_005502385.1_01082 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKYNTYAKGQCTYYVFDRVKEDHHLISNQWGDAKHWANKAKKQGYTVNENPTKGSILHYPKGKHGHVAYVEQVNNDGSLIVSDMNFRKPYEITTRFVDVDQVDQFNYIHPKSNTNMT . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 133664 134017 . - 0 GCA_005502385.1_01082 GCA_005502385.1_01082_gene,GCA_005502385.1_01082_mRNA GCA_005502385.1_01082 putative autolysin SsaALP GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKYNTYAKGQCTYYVFDRVKEDHHLISNQWGDAKHWANKAKKQGYTVNENPTKGSILHYPKGKHGHVAYVEQVNNDGSLIVSDMNFRKPYEITTRFVDVDQVDQFNYIHPKSNTNMT persistent 117 CHAP domain-containing protein WP_242227378.1 UPI001F56E2F0 UniRef100_A0A3S7GT93,UniRef50_A0A1E5TLA5,UniRef90_A0A974QNT3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 134014 134139 . - . GCA_005502385.1_01083_gene GCA_005502385.1_01083 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKWIFLMVFVCMIFTAGAVFDGLDNQDMTEPTIHFWEKIL . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 134014 134139 . - . GCA_005502385.1_01083_mRNA GCA_005502385.1_01083 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKWIFLMVFVCMIFTAGAVFDGLDNQDMTEPTIHFWEKIL . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 134014 134139 . - 0 GCA_005502385.1_01083 GCA_005502385.1_01083_gene,GCA_005502385.1_01083_mRNA GCA_005502385.1_01083 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKWIFLMVFVCMIFTAGAVFDGLDNQDMTEPTIHFWEKIL persistent 41 hypothetical protein . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 134144 134938 . - . GCA_005502385.1_01084_gene GCA_005502385.1_01084 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MFHDNDAHFINGITLNVRDLRTLQPFYEELLGFKKVEETLTAVKYQVGDSHHYITLREIKSGRNPLSQEAGLFYIGIQLSNKQHLADLIEKLNDYELPINGGEQNVCTFIFVEDPEGHMFKFYVDKAISDWKQESEWIRLNIKPLDVSSLLPYASTIGWQGLPNDSKIGNISLKTIRLNEVREYYLNHFGLVPSAYLDDESFYLASEQYYCHLSMNQWNSKIKRIDNEHTYGLSIVDFHYPETHHINIKGPDGIQFRFNFIEVE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 134144 134938 . - . GCA_005502385.1_01084_mRNA GCA_005502385.1_01084 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MFHDNDAHFINGITLNVRDLRTLQPFYEELLGFKKVEETLTAVKYQVGDSHHYITLREIKSGRNPLSQEAGLFYIGIQLSNKQHLADLIEKLNDYELPINGGEQNVCTFIFVEDPEGHMFKFYVDKAISDWKQESEWIRLNIKPLDVSSLLPYASTIGWQGLPNDSKIGNISLKTIRLNEVREYYLNHFGLVPSAYLDDESFYLASEQYYCHLSMNQWNSKIKRIDNEHTYGLSIVDFHYPETHHINIKGPDGIQFRFNFIEVE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 134144 134938 . - 0 GCA_005502385.1_01084 GCA_005502385.1_01084_gene,GCA_005502385.1_01084_mRNA GCA_005502385.1_01084 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MFHDNDAHFINGITLNVRDLRTLQPFYEELLGFKKVEETLTAVKYQVGDSHHYITLREIKSGRNPLSQEAGLFYIGIQLSNKQHLADLIEKLNDYELPINGGEQNVCTFIFVEDPEGHMFKFYVDKAISDWKQESEWIRLNIKPLDVSSLLPYASTIGWQGLPNDSKIGNISLKTIRLNEVREYYLNHFGLVPSAYLDDESFYLASEQYYCHLSMNQWNSKIKRIDNEHTYGLSIVDFHYPETHHINIKGPDGIQFRFNFIEVE persistent 264 Glyoxalase WP_017174552.1 UPI0003182C6D UniRef100_A0A3S7GT85,UniRef50_A0AAP7IFI2,UniRef90_A0A3S7GT85 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 135131 136543 . - . GCA_005502385.1_01085_gene GCA_005502385.1_01085 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MMGKILLTEASGYIGSHLKDKLKVNHEIIAISRNAQNKKNEKNVTWKSADLFDLDAITEVMKGIDTAIYLGHSMKTSAKLTQANFEDMDALLADNVGRVAKKHGVKHIIFMSGIITNDSHLSLHLKSRLECEKILRYYGVPVSTLRAGLIIDSNGSSYPIFKRMIERLSAMILPNWAYNMIAPVSMDDVIDKLAMLVERSPKENEVFNITRPKVMNYQELFERIATILDKHLFILHLPTILIRLSRYWIKEKMNGKENVKKALKEKQDEQQIITTKQSKSNQNKRDEVKDVRAMTRFRIPESYSIQDVTREYAEFINNITLHLVNGTINEHEFNIQLPLIRKCILKMKRDNHDSINEMIVYKIVGGDLAMVKDSSNARFEFRRILDTNEGIAALQGYEPTLPWGVYKFTQAIAHKFVMGVFKQYMNHLASYEKDKQDSVNKIFTNLAMTTGVMFGACVGTRIYNKVLAKK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 135131 136543 . - . GCA_005502385.1_01085_mRNA GCA_005502385.1_01085 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MMGKILLTEASGYIGSHLKDKLKVNHEIIAISRNAQNKKNEKNVTWKSADLFDLDAITEVMKGIDTAIYLGHSMKTSAKLTQANFEDMDALLADNVGRVAKKHGVKHIIFMSGIITNDSHLSLHLKSRLECEKILRYYGVPVSTLRAGLIIDSNGSSYPIFKRMIERLSAMILPNWAYNMIAPVSMDDVIDKLAMLVERSPKENEVFNITRPKVMNYQELFERIATILDKHLFILHLPTILIRLSRYWIKEKMNGKENVKKALKEKQDEQQIITTKQSKSNQNKRDEVKDVRAMTRFRIPESYSIQDVTREYAEFINNITLHLVNGTINEHEFNIQLPLIRKCILKMKRDNHDSINEMIVYKIVGGDLAMVKDSSNARFEFRRILDTNEGIAALQGYEPTLPWGVYKFTQAIAHKFVMGVFKQYMNHLASYEKDKQDSVNKIFTNLAMTTGVMFGACVGTRIYNKVLAKK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 135131 136543 . - 0 GCA_005502385.1_01085 GCA_005502385.1_01085_gene,GCA_005502385.1_01085_mRNA GCA_005502385.1_01085 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MMGKILLTEASGYIGSHLKDKLKVNHEIIAISRNAQNKKNEKNVTWKSADLFDLDAITEVMKGIDTAIYLGHSMKTSAKLTQANFEDMDALLADNVGRVAKKHGVKHIIFMSGIITNDSHLSLHLKSRLECEKILRYYGVPVSTLRAGLIIDSNGSSYPIFKRMIERLSAMILPNWAYNMIAPVSMDDVIDKLAMLVERSPKENEVFNITRPKVMNYQELFERIATILDKHLFILHLPTILIRLSRYWIKEKMNGKENVKKALKEKQDEQQIITTKQSKSNQNKRDEVKDVRAMTRFRIPESYSIQDVTREYAEFINNITLHLVNGTINEHEFNIQLPLIRKCILKMKRDNHDSINEMIVYKIVGGDLAMVKDSSNARFEFRRILDTNEGIAALQGYEPTLPWGVYKFTQAIAHKFVMGVFKQYMNHLASYEKDKQDSVNKIFTNLAMTTGVMFGACVGTRIYNKVLAKK shell 470 NAD(P)H-binding protein UniRef50_A0A3S7H0A6,UniRef90_A0A3S7H0A6 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 136737 139487 . - . GCA_005502385.1_01086_gene GCA_005502385.1_01086 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNYKETLLMPKTDFPMRGGLPNKEPKIQEQWEANNHYQKALEKNEGNQSFILHDGPPYANGNLHMGHALNKIIKDIIVRYKTMQGFYSPYVPGWDTHGLPIEQALTKKGVDRKKMSIAEFREKCKEFALEQVELQKQDFKRLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDKRSASIYVAFDVKDSKGTIDEDAQFIIWTTTPWTLPSNVAITVHPDLKYGQYNVNGKKYVIAEALAESVSEALGWDKDTIQLEKEFTGKELEYVETQHPFIDRVSLVINGGHVTTDAGTGCVHTAPGHGEDDYVVGQKYDLPVISPLDDKGVFTEEGGQFEGMFYDKANKAVTDLLTDKGALLKLDFITHNYPHDWRTKKPVIFRATPQWFASINKVRQDILDAIEETDFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKETVNHVADLFEEYGSNVWFEREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETRPELHFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPNQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSVPEHELLEVDRYLLNRLREFTASTINHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQKDAHKRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKEESVHLADMPKVVDVDQELLDKWNQFMSLRDDVNRALEAARNEKVIGKSLEAKVVIGNNDHFKAAEFLQQFNDLQQLFIVSQVEVTEKVDNGNEYQHGDIRIDHASGEKCERCWNYSEALGSVGELDHLCPRCQEVVKTLV . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 136737 139487 . - . GCA_005502385.1_01086_mRNA GCA_005502385.1_01086 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNYKETLLMPKTDFPMRGGLPNKEPKIQEQWEANNHYQKALEKNEGNQSFILHDGPPYANGNLHMGHALNKIIKDIIVRYKTMQGFYSPYVPGWDTHGLPIEQALTKKGVDRKKMSIAEFREKCKEFALEQVELQKQDFKRLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDKRSASIYVAFDVKDSKGTIDEDAQFIIWTTTPWTLPSNVAITVHPDLKYGQYNVNGKKYVIAEALAESVSEALGWDKDTIQLEKEFTGKELEYVETQHPFIDRVSLVINGGHVTTDAGTGCVHTAPGHGEDDYVVGQKYDLPVISPLDDKGVFTEEGGQFEGMFYDKANKAVTDLLTDKGALLKLDFITHNYPHDWRTKKPVIFRATPQWFASINKVRQDILDAIEETDFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKETVNHVADLFEEYGSNVWFEREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETRPELHFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPNQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSVPEHELLEVDRYLLNRLREFTASTINHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQKDAHKRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKEESVHLADMPKVVDVDQELLDKWNQFMSLRDDVNRALEAARNEKVIGKSLEAKVVIGNNDHFKAAEFLQQFNDLQQLFIVSQVEVTEKVDNGNEYQHGDIRIDHASGEKCERCWNYSEALGSVGELDHLCPRCQEVVKTLV . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 136737 139487 . - 0 GCA_005502385.1_01086 GCA_005502385.1_01086_gene,GCA_005502385.1_01086_mRNA GCA_005502385.1_01086 Isoleucine--tRNA ligase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNYKETLLMPKTDFPMRGGLPNKEPKIQEQWEANNHYQKALEKNEGNQSFILHDGPPYANGNLHMGHALNKIIKDIIVRYKTMQGFYSPYVPGWDTHGLPIEQALTKKGVDRKKMSIAEFREKCKEFALEQVELQKQDFKRLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDKRSASIYVAFDVKDSKGTIDEDAQFIIWTTTPWTLPSNVAITVHPDLKYGQYNVNGKKYVIAEALAESVSEALGWDKDTIQLEKEFTGKELEYVETQHPFIDRVSLVINGGHVTTDAGTGCVHTAPGHGEDDYVVGQKYDLPVISPLDDKGVFTEEGGQFEGMFYDKANKAVTDLLTDKGALLKLDFITHNYPHDWRTKKPVIFRATPQWFASINKVRQDILDAIEETDFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKETVNHVADLFEEYGSNVWFEREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETRPELHFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPNQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSVPEHELLEVDRYLLNRLREFTASTINHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQKDAHKRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKEESVHLADMPKVVDVDQELLDKWNQFMSLRDDVNRALEAARNEKVIGKSLEAKVVIGNNDHFKAAEFLQQFNDLQQLFIVSQVEVTEKVDNGNEYQHGDIRIDHASGEKCERCWNYSEALGSVGELDHLCPRCQEVVKTLV persistent 916 ileS isoleucine--tRNA ligase 6.1.1.5 GO:0000166,GO:0004822,GO:0005524,GO:0006428 UniRef50_P41972,UniRef90_A0A8X8KFK2 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 139707 140387 . - . GCA_005502385.1_01087_gene GCA_005502385.1_01087 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAFTPNEIRNKEFTRVKNGLEPAEVSDFLTQLSNEIERLKEEKKQLEKVLEERDTNIKSYQDVHQSVSDALIQAQQAGEQTKIAATKESEAIISKAKAQADVIVNDAIEKARHLSFQTEDMKRQSKIFRSRFRMLVEAQLDLLKNDDWDYLLNYDFDAEQVTQENIQHLNPQDVNPNANSETPTSETTETVSNEENQSINSNETTNTNKSTSENKDVSSSESSSNK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 139707 140387 . - . GCA_005502385.1_01087_mRNA GCA_005502385.1_01087 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAFTPNEIRNKEFTRVKNGLEPAEVSDFLTQLSNEIERLKEEKKQLEKVLEERDTNIKSYQDVHQSVSDALIQAQQAGEQTKIAATKESEAIISKAKAQADVIVNDAIEKARHLSFQTEDMKRQSKIFRSRFRMLVEAQLDLLKNDDWDYLLNYDFDAEQVTQENIQHLNPQDVNPNANSETPTSETTETVSNEENQSINSNETTNTNKSTSENKDVSSSESSSNK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 139707 140387 . - 0 GCA_005502385.1_01087 GCA_005502385.1_01087_gene,GCA_005502385.1_01087_mRNA GCA_005502385.1_01087 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAFTPNEIRNKEFTRVKNGLEPAEVSDFLTQLSNEIERLKEEKKQLEKVLEERDTNIKSYQDVHQSVSDALIQAQQAGEQTKIAATKESEAIISKAKAQADVIVNDAIEKARHLSFQTEDMKRQSKIFRSRFRMLVEAQLDLLKNDDWDYLLNYDFDAEQVTQENIQHLNPQDVNPNANSETPTSETTETVSNEENQSINSNETTNTNKSTSENKDVSSSESSSNK persistent 226 Cell division protein DivIVA WP_002448772.1 UPI00019FC97A UniRef100_UPI00019FC97A,UniRef50_Q2FZ83,UniRef90_A0A3S7GT89 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 140451 141125 . - . GCA_005502385.1_01088_gene GCA_005502385.1_01088 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTSFLDPRGQYILEVIVGSFEDMKVSYFGGQSAERKRAIIAPSYFEPTEGDFEEVLIQINYPEKFVSIQHQHVLGTLMSLGIEREQVGDILVGDTIQFVLTKQLESYIMMELTKIKGATVKLDSIPFKDMIQSKENWNIHHSTVSALRLDVVLKEMIRKSRSIAKQLIEKKRVKVNHTLIDSPDFQLQNNDLLSIQGFGRARIIDIGGKTKKEKVHITYQTLFK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 140451 141125 . - . GCA_005502385.1_01088_mRNA GCA_005502385.1_01088 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTSFLDPRGQYILEVIVGSFEDMKVSYFGGQSAERKRAIIAPSYFEPTEGDFEEVLIQINYPEKFVSIQHQHVLGTLMSLGIEREQVGDILVGDTIQFVLTKQLESYIMMELTKIKGATVKLDSIPFKDMIQSKENWNIHHSTVSALRLDVVLKEMIRKSRSIAKQLIEKKRVKVNHTLIDSPDFQLQNNDLLSIQGFGRARIIDIGGKTKKEKVHITYQTLFK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 140451 141125 . - 0 GCA_005502385.1_01088 GCA_005502385.1_01088_gene,GCA_005502385.1_01088_mRNA GCA_005502385.1_01088 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTSFLDPRGQYILEVIVGSFEDMKVSYFGGQSAERKRAIIAPSYFEPTEGDFEEVLIQINYPEKFVSIQHQHVLGTLMSLGIEREQVGDILVGDTIQFVLTKQLESYIMMELTKIKGATVKLDSIPFKDMIQSKENWNIHHSTVSALRLDVVLKEMIRKSRSIAKQLIEKKRVKVNHTLIDSPDFQLQNNDLLSIQGFGRARIIDIGGKTKKEKVHITYQTLFK persistent 224 RNA-binding protein UniRef50_Q2FZ84,UniRef90_A0A4Q9WTV8 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 141300 141596 . - . GCA_005502385.1_01089_gene GCA_005502385.1_01089 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDVGILASIFNFILLLVQIYYWGMIIYFFTSWVPTIRESKFGSFLSKIYEPFLEPFRKIIPPIGMIDISSIVALFVLVLFQYGLKSIFDMILNYLILK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 141300 141596 . - . GCA_005502385.1_01089_mRNA GCA_005502385.1_01089 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDVGILASIFNFILLLVQIYYWGMIIYFFTSWVPTIRESKFGSFLSKIYEPFLEPFRKIIPPIGMIDISSIVALFVLVLFQYGLKSIFDMILNYLILK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 141300 141596 . - 0 GCA_005502385.1_01089 GCA_005502385.1_01089_gene,GCA_005502385.1_01089_mRNA GCA_005502385.1_01089 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDVGILASIFNFILLLVQIYYWGMIIYFFTSWVPTIRESKFGSFLSKIYEPFLEPFRKIIPPIGMIDISSIVALFVLVLFQYGLKSIFDMILNYLILK persistent 98 yggT YggT family protein WP_002455457.1 UPI0001EF511C UniRef100_A0A1L8Y9Z9,UniRef50_Q2FZ85,UniRef90_A0A974KZW3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 141619 142209 . - . GCA_005502385.1_01090_gene GCA_005502385.1_01090 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAIKDLFNNFFLMEDEEEVESPAERQQRVTQNEENQNRNMQQQPIERTQNNQNHLKTVPQKKVSKNYNTEERNYRMGNTSNKSNSKNVVTMNQSAGTGYSNYENSKMCLFEPRVFSDTQDIADELKNRRATLVNLQRIDKVSAKRIIDFLSGTVYAIGGDIQRVGADIFLCTPDNVEVAGSITDHLEQMNTQQHYE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 141619 142209 . - . GCA_005502385.1_01090_mRNA GCA_005502385.1_01090 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAIKDLFNNFFLMEDEEEVESPAERQQRVTQNEENQNRNMQQQPIERTQNNQNHLKTVPQKKVSKNYNTEERNYRMGNTSNKSNSKNVVTMNQSAGTGYSNYENSKMCLFEPRVFSDTQDIADELKNRRATLVNLQRIDKVSAKRIIDFLSGTVYAIGGDIQRVGADIFLCTPDNVEVAGSITDHLEQMNTQQHYE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 141619 142209 . - 0 GCA_005502385.1_01090 GCA_005502385.1_01090_gene,GCA_005502385.1_01090_mRNA GCA_005502385.1_01090 Cell division protein SepF GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAIKDLFNNFFLMEDEEEVESPAERQQRVTQNEENQNRNMQQQPIERTQNNQNHLKTVPQKKVSKNYNTEERNYRMGNTSNKSNSKNVVTMNQSAGTGYSNYENSKMCLFEPRVFSDTQDIADELKNRRATLVNLQRIDKVSAKRIIDFLSGTVYAIGGDIQRVGADIFLCTPDNVEVAGSITDHLEQMNTQQHYE persistent 196 sepF Cell division protein SepF WP_002455458.1 UPI0001EF511D UniRef100_A0AAE5JN02,UniRef50_Q2FZ86,UniRef90_A0AAE5JN02 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 142215 142889 . - . GCA_005502385.1_01091_gene GCA_005502385.1_01091 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKVTENLEKIQTEINHHLEKSVIKTAPNVIAVTKYVTIDRAKEAYDAGLRHFGENRVEGFLEKKQALPKDVTMHFIGSLQSRKVKDVINDIDYLHALDRLNLAKEINKRATHTISCFIQVNVSGEETKHGIALSEVNDFIEQIKAFDNIKIVGLMTMAPYTDDKDYIHQLFKQLRLKRDEIKNLKLNYAPCEYLSMGMSNDYTIAVEEGATFIRIGTKLVGEEE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 142215 142889 . - . GCA_005502385.1_01091_mRNA GCA_005502385.1_01091 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKVTENLEKIQTEINHHLEKSVIKTAPNVIAVTKYVTIDRAKEAYDAGLRHFGENRVEGFLEKKQALPKDVTMHFIGSLQSRKVKDVINDIDYLHALDRLNLAKEINKRATHTISCFIQVNVSGEETKHGIALSEVNDFIEQIKAFDNIKIVGLMTMAPYTDDKDYIHQLFKQLRLKRDEIKNLKLNYAPCEYLSMGMSNDYTIAVEEGATFIRIGTKLVGEEE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 142215 142889 . - 0 GCA_005502385.1_01091 GCA_005502385.1_01091_gene,GCA_005502385.1_01091_mRNA GCA_005502385.1_01091 Pyridoxal phosphate homeostasis protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKVTENLEKIQTEINHHLEKSVIKTAPNVIAVTKYVTIDRAKEAYDAGLRHFGENRVEGFLEKKQALPKDVTMHFIGSLQSRKVKDVINDIDYLHALDRLNLAKEINKRATHTISCFIQVNVSGEETKHGIALSEVNDFIEQIKAFDNIKIVGLMTMAPYTDDKDYIHQLFKQLRLKRDEIKNLKLNYAPCEYLSMGMSNDYTIAVEEGATFIRIGTKLVGEEE persistent 224 Pyridoxal phosphate homeostasis protein WP_017174546.1 UPI000301FABD UniRef100_A0A4Q9WTG9,UniRef50_U2FRM0,UniRef90_A0A4Q9WTG9 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 142952 143746 . - . GCA_005502385.1_01092_gene GCA_005502385.1_01092 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEKFIKQPHYLSYTSQYDQLTLGFTTREDGKSPYPRDAFNMARYIDDEPSYVTHHQEILANAINFPTQQWVFPIQTHENNIAHITKAHCGANIKTLGNELYGIDGMYTYDSDILLTMCYADCVPVYFYSEKHHFIALAHAGWRGTYGQIVVEMLKYVEFDYQDLNVVIGPATSSTYEINDDIKKKFETLPINSDKYIETRDTDRHGIDLKLANALLLINSGVPAENINITKYTTSEDLSLFFSYRVEKGKTGRMLAFIGQKGEV . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 142952 143746 . - . GCA_005502385.1_01092_mRNA GCA_005502385.1_01092 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEKFIKQPHYLSYTSQYDQLTLGFTTREDGKSPYPRDAFNMARYIDDEPSYVTHHQEILANAINFPTQQWVFPIQTHENNIAHITKAHCGANIKTLGNELYGIDGMYTYDSDILLTMCYADCVPVYFYSEKHHFIALAHAGWRGTYGQIVVEMLKYVEFDYQDLNVVIGPATSSTYEINDDIKKKFETLPINSDKYIETRDTDRHGIDLKLANALLLINSGVPAENINITKYTTSEDLSLFFSYRVEKGKTGRMLAFIGQKGEV . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 142952 143746 . - 0 GCA_005502385.1_01092 GCA_005502385.1_01092_gene,GCA_005502385.1_01092_mRNA GCA_005502385.1_01092 Polyphenol oxidase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEKFIKQPHYLSYTSQYDQLTLGFTTREDGKSPYPRDAFNMARYIDDEPSYVTHHQEILANAINFPTQQWVFPIQTHENNIAHITKAHCGANIKTLGNELYGIDGMYTYDSDILLTMCYADCVPVYFYSEKHHFIALAHAGWRGTYGQIVVEMLKYVEFDYQDLNVVIGPATSSTYEINDDIKKKFETLPINSDKYIETRDTDRHGIDLKLANALLLINSGVPAENINITKYTTSEDLSLFFSYRVEKGKTGRMLAFIGQKGEV persistent 264 pgeF peptidoglycan editing factor PgeF 2.4.2.1,2.4.2.28,3.5.4.4 WP_017174545.1 UPI0003137D5D UniRef100_A0A4V2KXF1,UniRef50_Q49WW9,UniRef90_A0A4V2KXF1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 143937 145115 . - . GCA_005502385.1_01093_gene GCA_005502385.1_01093 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLEFEQGFNHLATLKVIGVGGGGNNAVNRMIDHGMNNVEFIAINTDGQALNLSKAESKIQIGEKLTRGLGAGANPEIGKKAAEESREQIEDAIQGADMVFVTAGMGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFGFEGRKRSTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFKEADNVLRQGVQGISDLIAVSGEVNLDFADVKTIMSNQGSALMGIGVSSGENRAVEAAKKAISSPLLETSIVGAQGVLMNITGGESLSLFEAQEAADIVQDAADEDVNMIFGTVINPELQDEIVVTVIATGFEDKPTSQGRKASSTGFGSSATSSTSTQSAPKEDSFTHSTSNSRPSDGLSERSHTTKDDDIPSFIRNREERRSRRTRR . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 143937 145115 . - . GCA_005502385.1_01093_mRNA GCA_005502385.1_01093 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLEFEQGFNHLATLKVIGVGGGGNNAVNRMIDHGMNNVEFIAINTDGQALNLSKAESKIQIGEKLTRGLGAGANPEIGKKAAEESREQIEDAIQGADMVFVTAGMGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFGFEGRKRSTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFKEADNVLRQGVQGISDLIAVSGEVNLDFADVKTIMSNQGSALMGIGVSSGENRAVEAAKKAISSPLLETSIVGAQGVLMNITGGESLSLFEAQEAADIVQDAADEDVNMIFGTVINPELQDEIVVTVIATGFEDKPTSQGRKASSTGFGSSATSSTSTQSAPKEDSFTHSTSNSRPSDGLSERSHTTKDDDIPSFIRNREERRSRRTRR . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 143937 145115 . - 0 GCA_005502385.1_01093 GCA_005502385.1_01093_gene,GCA_005502385.1_01093_mRNA GCA_005502385.1_01093 Cell division protein FtsZ GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLEFEQGFNHLATLKVIGVGGGGNNAVNRMIDHGMNNVEFIAINTDGQALNLSKAESKIQIGEKLTRGLGAGANPEIGKKAAEESREQIEDAIQGADMVFVTAGMGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFGFEGRKRSTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFKEADNVLRQGVQGISDLIAVSGEVNLDFADVKTIMSNQGSALMGIGVSSGENRAVEAAKKAISSPLLETSIVGAQGVLMNITGGESLSLFEAQEAADIVQDAADEDVNMIFGTVINPELQDEIVVTVIATGFEDKPTSQGRKASSTGFGSSATSSTSTQSAPKEDSFTHSTSNSRPSDGLSERSHTTKDDDIPSFIRNREERRSRRTRR persistent 392 ftsZ cell division protein FtsZ GO:0000910,GO:0000917,GO:0003924,GO:0005525,GO:0005737,GO:0032153,GO:0043093,GO:0051258 COG0206,D WP_017174544.1 UPI00030F6BC1 UniRef100_A0A4Q9X000,UniRef50_Q2FZ89,UniRef90_Q2FZ89 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 145145 146578 . - . GCA_005502385.1_01094_gene GCA_005502385.1_01094 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEEHYYVSIDIGSSSVKTIVGEKFHNGINVIGTGQTYTSGIKNGLIDDFDIAKQAIKDTIKKASIASGVDIKEVFLKLPIIGTEVYDEENEIDFYEDTEISGSHIETVLEGIRQKNDVPDTEVIDVFPIRFIVDGDNEVSDPKELIARHSLKVEAGVIAIHKSILINMIKCVESCGVDVLDVYSDAYNYGSILSATEKELGACVIDIGEDLTQIAFYERGELVDADSIELAGRDITDDIAEELNTTYETAEKIKHQYGHAYTQSASDQDVFSVDQVDSDELVEYTQKDLSAVIERTVQDIFDEVFDVLVDLGLTKVNGGFIVTGGSSNLLGVKELLSTMVNEKIRIHTPSQMGIRKPEFTSAISTISSSITFDELLDYVTINYQDNDEFEEEVIENDEHNHTSKSGGFDWFKRKSNKNEDTDENHQPEVREKAEKHDDYETYDENNHQDGTHHYDDEHEKSDKEESKFKKLMKSLFE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 145145 146578 . - . GCA_005502385.1_01094_mRNA GCA_005502385.1_01094 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEEHYYVSIDIGSSSVKTIVGEKFHNGINVIGTGQTYTSGIKNGLIDDFDIAKQAIKDTIKKASIASGVDIKEVFLKLPIIGTEVYDEENEIDFYEDTEISGSHIETVLEGIRQKNDVPDTEVIDVFPIRFIVDGDNEVSDPKELIARHSLKVEAGVIAIHKSILINMIKCVESCGVDVLDVYSDAYNYGSILSATEKELGACVIDIGEDLTQIAFYERGELVDADSIELAGRDITDDIAEELNTTYETAEKIKHQYGHAYTQSASDQDVFSVDQVDSDELVEYTQKDLSAVIERTVQDIFDEVFDVLVDLGLTKVNGGFIVTGGSSNLLGVKELLSTMVNEKIRIHTPSQMGIRKPEFTSAISTISSSITFDELLDYVTINYQDNDEFEEEVIENDEHNHTSKSGGFDWFKRKSNKNEDTDENHQPEVREKAEKHDDYETYDENNHQDGTHHYDDEHEKSDKEESKFKKLMKSLFE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 145145 146578 . - 0 GCA_005502385.1_01094 GCA_005502385.1_01094_gene,GCA_005502385.1_01094_mRNA GCA_005502385.1_01094 Cell division protein FtsA GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEEHYYVSIDIGSSSVKTIVGEKFHNGINVIGTGQTYTSGIKNGLIDDFDIAKQAIKDTIKKASIASGVDIKEVFLKLPIIGTEVYDEENEIDFYEDTEISGSHIETVLEGIRQKNDVPDTEVIDVFPIRFIVDGDNEVSDPKELIARHSLKVEAGVIAIHKSILINMIKCVESCGVDVLDVYSDAYNYGSILSATEKELGACVIDIGEDLTQIAFYERGELVDADSIELAGRDITDDIAEELNTTYETAEKIKHQYGHAYTQSASDQDVFSVDQVDSDELVEYTQKDLSAVIERTVQDIFDEVFDVLVDLGLTKVNGGFIVTGGSSNLLGVKELLSTMVNEKIRIHTPSQMGIRKPEFTSAISTISSSITFDELLDYVTINYQDNDEFEEEVIENDEHNHTSKSGGFDWFKRKSNKNEDTDENHQPEVREKAEKHDDYETYDENNHQDGTHHYDDEHEKSDKEESKFKKLMKSLFE persistent 477 ftsA cell division protein FtsA GO:0005515,GO:0005524,GO:0043093 COG0849,D WP_017174543.1 UPI0002F75E71 UniRef100_A0A8X8GLC5,UniRef50_A0A640MTU3,UniRef90_A0A640MTU3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 146682 147827 . - . GCA_005502385.1_01095_gene GCA_005502385.1_01095 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDDTRGNRNKKIRSIKRSFDKDKTELENDKNKKIKDDVKSKDRLQKEKNLSNDRRSNKSLNSSKNKGENLKKEVKTRLREKRNKFQNDKYSHLTVAEKREQQKIDKRKRQKRIQYIIVTTLILLIILFLLYMFTPLSRISHVNISGNHNVSDSQVEKELNIKKGSRIYTFSKSKAINNLKKNSLIKDVQINKQLPNTLNVKIIENNLVGIVKDKNKYVPIIEGNKKLDNYNGDIANSAPVLEDFKGDNLNRITKALSKMSNETRDMISEIKYAPLQNQQNRVLLYMKDGMQVVGDINTLANKIEYYPQMSQSLAKDSSGQLKTQGYIDLSVGASFIPYNENSSINSKSDQNVRQKTQQETEAKNELQSALNKISEQSDTNN . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 146682 147827 . - . GCA_005502385.1_01095_mRNA GCA_005502385.1_01095 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDDTRGNRNKKIRSIKRSFDKDKTELENDKNKKIKDDVKSKDRLQKEKNLSNDRRSNKSLNSSKNKGENLKKEVKTRLREKRNKFQNDKYSHLTVAEKREQQKIDKRKRQKRIQYIIVTTLILLIILFLLYMFTPLSRISHVNISGNHNVSDSQVEKELNIKKGSRIYTFSKSKAINNLKKNSLIKDVQINKQLPNTLNVKIIENNLVGIVKDKNKYVPIIEGNKKLDNYNGDIANSAPVLEDFKGDNLNRITKALSKMSNETRDMISEIKYAPLQNQQNRVLLYMKDGMQVVGDINTLANKIEYYPQMSQSLAKDSSGQLKTQGYIDLSVGASFIPYNENSSINSKSDQNVRQKTQQETEAKNELQSALNKISEQSDTNN . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 146682 147827 . - 0 GCA_005502385.1_01095 GCA_005502385.1_01095_gene,GCA_005502385.1_01095_mRNA GCA_005502385.1_01095 Cell division protein DivIB GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDDTRGNRNKKIRSIKRSFDKDKTELENDKNKKIKDDVKSKDRLQKEKNLSNDRRSNKSLNSSKNKGENLKKEVKTRLREKRNKFQNDKYSHLTVAEKREQQKIDKRKRQKRIQYIIVTTLILLIILFLLYMFTPLSRISHVNISGNHNVSDSQVEKELNIKKGSRIYTFSKSKAINNLKKNSLIKDVQINKQLPNTLNVKIIENNLVGIVKDKNKYVPIIEGNKKLDNYNGDIANSAPVLEDFKGDNLNRITKALSKMSNETRDMISEIKYAPLQNQQNRVLLYMKDGMQVVGDINTLANKIEYYPQMSQSLAKDSSGQLKTQGYIDLSVGASFIPYNENSSINSKSDQNVRQKTQQETEAKNELQSALNKISEQSDTNN persistent 381 Cell division protein DivIB WP_019835559.1 UPI000381D79F UniRef100_UPI000381D79F,UniRef50_A0A7Z1N7T0,UniRef90_A0A8X8GNK2 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 147846 149192 . - . GCA_005502385.1_01096_gene GCA_005502385.1_01096 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLNYTGLENKDVLVVGLAKSGYEAAKLLVKLGANVTVNDGKDLSKDPHAKDLETIGVKIVDGGHPLSLLDSNPIIVKNPGIPYTVSIIDEAYQRGLKILTEVELSYLISEAPIIAVTGTNGKTTTTSLIGDMFKKSRLTGRLSGNIGYVASKVAQETSPDEYLITELSSFQLLGIEHYKPHIAIITNIYSAHLDYHESLENYQNAKRRIYKNQTEDDYLICNYHQRHLIETENLKAKTLYFSTQQEVDGIYIKDNYIVYNDVNLINIDDLVLPGEHNLENILAAVLAAILAGVPIKAIVDSLTTFSGIEHRLQYIGTNRTNKYYNDSKATNTLATQFALNSFKQPIIWLCGGLDRGNGFDELIPYMKHVRVMVVFGETQDKFAKLGNSQGKEVIKAVDIEDAVKKVQDVIEPNDVVLLSPACASWDQYKTFEERGERFIESFRAYLPS . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 147846 149192 . - . GCA_005502385.1_01096_mRNA GCA_005502385.1_01096 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLNYTGLENKDVLVVGLAKSGYEAAKLLVKLGANVTVNDGKDLSKDPHAKDLETIGVKIVDGGHPLSLLDSNPIIVKNPGIPYTVSIIDEAYQRGLKILTEVELSYLISEAPIIAVTGTNGKTTTTSLIGDMFKKSRLTGRLSGNIGYVASKVAQETSPDEYLITELSSFQLLGIEHYKPHIAIITNIYSAHLDYHESLENYQNAKRRIYKNQTEDDYLICNYHQRHLIETENLKAKTLYFSTQQEVDGIYIKDNYIVYNDVNLINIDDLVLPGEHNLENILAAVLAAILAGVPIKAIVDSLTTFSGIEHRLQYIGTNRTNKYYNDSKATNTLATQFALNSFKQPIIWLCGGLDRGNGFDELIPYMKHVRVMVVFGETQDKFAKLGNSQGKEVIKAVDIEDAVKKVQDVIEPNDVVLLSPACASWDQYKTFEERGERFIESFRAYLPS . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 147846 149192 . - 0 GCA_005502385.1_01096 GCA_005502385.1_01096_gene,GCA_005502385.1_01096_mRNA GCA_005502385.1_01096 UDP-N-acetylmuramoylalanine--D-glutamate ligase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLNYTGLENKDVLVVGLAKSGYEAAKLLVKLGANVTVNDGKDLSKDPHAKDLETIGVKIVDGGHPLSLLDSNPIIVKNPGIPYTVSIIDEAYQRGLKILTEVELSYLISEAPIIAVTGTNGKTTTTSLIGDMFKKSRLTGRLSGNIGYVASKVAQETSPDEYLITELSSFQLLGIEHYKPHIAIITNIYSAHLDYHESLENYQNAKRRIYKNQTEDDYLICNYHQRHLIETENLKAKTLYFSTQQEVDGIYIKDNYIVYNDVNLINIDDLVLPGEHNLENILAAVLAAILAGVPIKAIVDSLTTFSGIEHRLQYIGTNRTNKYYNDSKATNTLATQFALNSFKQPIIWLCGGLDRGNGFDELIPYMKHVRVMVVFGETQDKFAKLGNSQGKEVIKAVDIEDAVKKVQDVIEPNDVVLLSPACASWDQYKTFEERGERFIESFRAYLPS persistent 448 murD UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 6.3.2.9 GO:0005524,GO:0005737,GO:0008360,GO:0008764,GO:0009252,GO:0051301,GO:0071555 COG0771,M WP_137689520.1 UPI0010F5C613 UniRef100_UPI0010F5C613,UniRef50_Q2FZ92,UniRef90_Q4L5N4 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 149194 150159 . - . GCA_005502385.1_01097_gene GCA_005502385.1_01097 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLFIFAIIALLITFILVPVLIPTLKRMKFGQSIREEGPQSHMKKTGTPTMGGLTFLISIIITSIIAIFFTDHSNPIILLLFVTIGFGLIGFIDDYIIVVKKNNQGLTSKQKFLAQIAIAIIFFILSDVFHLIEFSTSINIPFTNFGIPLSFAYVIFIVFWQVGFSNAVNLTDGLDGLATGLSIIGFTMYAIMSFMLNAPAIGTFCIIMIFALLGFLPYNLNPAKVFMGDTGSLALGGIFATISIMLNQEFSLLFVGLVFVIETLSVMLQVSSYKLTKKRIFKMTPIHHHFELSGWSEWKVVSVFWLVGLISGLIGLWIGVH . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 149194 150159 . - . GCA_005502385.1_01097_mRNA GCA_005502385.1_01097 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLFIFAIIALLITFILVPVLIPTLKRMKFGQSIREEGPQSHMKKTGTPTMGGLTFLISIIITSIIAIFFTDHSNPIILLLFVTIGFGLIGFIDDYIIVVKKNNQGLTSKQKFLAQIAIAIIFFILSDVFHLIEFSTSINIPFTNFGIPLSFAYVIFIVFWQVGFSNAVNLTDGLDGLATGLSIIGFTMYAIMSFMLNAPAIGTFCIIMIFALLGFLPYNLNPAKVFMGDTGSLALGGIFATISIMLNQEFSLLFVGLVFVIETLSVMLQVSSYKLTKKRIFKMTPIHHHFELSGWSEWKVVSVFWLVGLISGLIGLWIGVH . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 149194 150159 . - 0 GCA_005502385.1_01097 GCA_005502385.1_01097_gene,GCA_005502385.1_01097_mRNA GCA_005502385.1_01097 Phospho-N-acetylmuramoyl-pentapeptide-transferase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLFIFAIIALLITFILVPVLIPTLKRMKFGQSIREEGPQSHMKKTGTPTMGGLTFLISIIITSIIAIFFTDHSNPIILLLFVTIGFGLIGFIDDYIIVVKKNNQGLTSKQKFLAQIAIAIIFFILSDVFHLIEFSTSINIPFTNFGIPLSFAYVIFIVFWQVGFSNAVNLTDGLDGLATGLSIIGFTMYAIMSFMLNAPAIGTFCIIMIFALLGFLPYNLNPAKVFMGDTGSLALGGIFATISIMLNQEFSLLFVGLVFVIETLSVMLQVSSYKLTKKRIFKMTPIHHHFELSGWSEWKVVSVFWLVGLISGLIGLWIGVH persistent 321 mraY phospho-N-acetylmuramoyl-pentapeptide-transferase 2.7.8.13 GO:0005886,GO:0008360,GO:0008963,GO:0009252,GO:0016020,GO:0046872,GO:0051301,GO:0051992,GO:0071555 COG0472,M WP_017174540.1 UPI0002FAC65B UniRef100_A0A3S7GTA2,UniRef50_Q2FZ93,UniRef90_Q4L5N3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 150334 152580 . - . GCA_005502385.1_01098_gene GCA_005502385.1_01098 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAKRKIKIRKNKLGAVLLVGLFGLLFFVLVLRYSYIMITGHSDGQNLVMRANEKYLVKTQEQPERGKIYDRNGKILAEDVQRYKLVAIIDKNAGEVGDTPRYVKDKKKTAKQLSKIIDMKPDEIEKRLNQKKAFQVEFGQKGTNLTYQDKVKLDKMDLPGITLYPETERFYPNGNFASHLIGMAQKNPDTGELNGALGVEKIFNSYLNGQKGSLSYIHDIWGYIAPNSKNEKAPKRGDDVHLTIDSNIQVFVEEALDDMVKRYEPKDLFAVVMDAKTGEILAYSQRPTFNPETGKDFGKKWANDLYQNAYEPGSTFKSYGLAAAIQEGKFNPKEKYESGHRDIMGSRISDWNKTGWGEIPMSLGFTYSSNTLMMHLQDLVGADKMKSWYERFGFGKSTNGMFDGELKGNIAWSNELQQKTSAFGQSTTVTPVQMIQAQSAFFNKGNMLKPWFVQSIDNPISKKTFYKGEKKIAGKPITSETADKVETELDKVVNSDKSHASNYRIDGYDIEGKTGTAQVVNENGSGYVKGANPYFVSFMGDAPKKHPRVIVYAGMSLAQKNDQEAYELGVSKAFKPIMENTLKYLNVGSKKDETQSAQYSKVPNVVGQPSQKAQDSLKGKDLQPVIIGNGNTIKAQSTRANTKLLPNSKVLAVTDGDITMPNMKGWTTDDVLAFQELTGINVTTKGSGYVTKQSVASGSTLKSNNKIEIELSTDDPNDSTSLTDSSGSDSNNTSDNSTDTTSNDKNDS . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 150334 152580 . - . GCA_005502385.1_01098_mRNA GCA_005502385.1_01098 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAKRKIKIRKNKLGAVLLVGLFGLLFFVLVLRYSYIMITGHSDGQNLVMRANEKYLVKTQEQPERGKIYDRNGKILAEDVQRYKLVAIIDKNAGEVGDTPRYVKDKKKTAKQLSKIIDMKPDEIEKRLNQKKAFQVEFGQKGTNLTYQDKVKLDKMDLPGITLYPETERFYPNGNFASHLIGMAQKNPDTGELNGALGVEKIFNSYLNGQKGSLSYIHDIWGYIAPNSKNEKAPKRGDDVHLTIDSNIQVFVEEALDDMVKRYEPKDLFAVVMDAKTGEILAYSQRPTFNPETGKDFGKKWANDLYQNAYEPGSTFKSYGLAAAIQEGKFNPKEKYESGHRDIMGSRISDWNKTGWGEIPMSLGFTYSSNTLMMHLQDLVGADKMKSWYERFGFGKSTNGMFDGELKGNIAWSNELQQKTSAFGQSTTVTPVQMIQAQSAFFNKGNMLKPWFVQSIDNPISKKTFYKGEKKIAGKPITSETADKVETELDKVVNSDKSHASNYRIDGYDIEGKTGTAQVVNENGSGYVKGANPYFVSFMGDAPKKHPRVIVYAGMSLAQKNDQEAYELGVSKAFKPIMENTLKYLNVGSKKDETQSAQYSKVPNVVGQPSQKAQDSLKGKDLQPVIIGNGNTIKAQSTRANTKLLPNSKVLAVTDGDITMPNMKGWTTDDVLAFQELTGINVTTKGSGYVTKQSVASGSTLKSNNKIEIELSTDDPNDSTSLTDSSGSDSNNTSDNSTDTTSNDKNDS . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 150334 152580 . - 0 GCA_005502385.1_01098 GCA_005502385.1_01098_gene,GCA_005502385.1_01098_mRNA GCA_005502385.1_01098 Penicillin-binding protein 2B GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAKRKIKIRKNKLGAVLLVGLFGLLFFVLVLRYSYIMITGHSDGQNLVMRANEKYLVKTQEQPERGKIYDRNGKILAEDVQRYKLVAIIDKNAGEVGDTPRYVKDKKKTAKQLSKIIDMKPDEIEKRLNQKKAFQVEFGQKGTNLTYQDKVKLDKMDLPGITLYPETERFYPNGNFASHLIGMAQKNPDTGELNGALGVEKIFNSYLNGQKGSLSYIHDIWGYIAPNSKNEKAPKRGDDVHLTIDSNIQVFVEEALDDMVKRYEPKDLFAVVMDAKTGEILAYSQRPTFNPETGKDFGKKWANDLYQNAYEPGSTFKSYGLAAAIQEGKFNPKEKYESGHRDIMGSRISDWNKTGWGEIPMSLGFTYSSNTLMMHLQDLVGADKMKSWYERFGFGKSTNGMFDGELKGNIAWSNELQQKTSAFGQSTTVTPVQMIQAQSAFFNKGNMLKPWFVQSIDNPISKKTFYKGEKKIAGKPITSETADKVETELDKVVNSDKSHASNYRIDGYDIEGKTGTAQVVNENGSGYVKGANPYFVSFMGDAPKKHPRVIVYAGMSLAQKNDQEAYELGVSKAFKPIMENTLKYLNVGSKKDETQSAQYSKVPNVVGQPSQKAQDSLKGKDLQPVIIGNGNTIKAQSTRANTKLLPNSKVLAVTDGDITMPNMKGWTTDDVLAFQELTGINVTTKGSGYVTKQSVASGSTLKSNNKIEIELSTDDPNDSTSLTDSSGSDSNNTSDNSTDTTSNDKNDS persistent 748 Penicillin-binding protein 3.4.-.- WP_048762358.1 UPI0006614582 UniRef100_UPI0006614582,UniRef50_A0A640MVC3,UniRef90_A0A3S7GW43 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 152561 152962 . - . GCA_005502385.1_01099_gene GCA_005502385.1_01099 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAVEKIYEPYEHIQHTSIPKEQPKTQSETKTVTKKVVVQLTRFEKFLYITLVTAIAVLAIYMLSLKMDAYDTNDKIAELDQKIEQQSNENNAIQSEIKKNSSYERIYDQAKKQGMSLKNDNVKVVRTNGEAKN . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 152561 152962 . - . GCA_005502385.1_01099_mRNA GCA_005502385.1_01099 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAVEKIYEPYEHIQHTSIPKEQPKTQSETKTVTKKVVVQLTRFEKFLYITLVTAIAVLAIYMLSLKMDAYDTNDKIAELDQKIEQQSNENNAIQSEIKKNSSYERIYDQAKKQGMSLKNDNVKVVRTNGEAKN . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 152561 152962 . - 0 GCA_005502385.1_01099 GCA_005502385.1_01099_gene,GCA_005502385.1_01099_mRNA GCA_005502385.1_01099 Cell division protein FtsL GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAVEKIYEPYEHIQHTSIPKEQPKTQSETKTVTKKVVVQLTRFEKFLYITLVTAIAVLAIYMLSLKMDAYDTNDKIAELDQKIEQQSNENNAIQSEIKKNSSYERIYDQAKKQGMSLKNDNVKVVRTNGEAKN persistent 133 ftsL cell division protein FtsL GO:0000910,GO:0016020 WP_017174538.1 UPI0002EECBD4 UniRef100_A0A4Q9WSN8,UniRef50_Q2FZ95,UniRef90_A0A974KY67 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 152976 153911 . - . GCA_005502385.1_01100_gene GCA_005502385.1_01100 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MFHHVSVMLKETIDELDIKEDGIYVDCTLGGAGHALYLLNQLNDDGRLIAIDQDTTALENAKEVLKDHLHKVTFVHNNFRELTDILKNLGIEKVDGIYYDLGVSSPQLDIPERGFSYHHDAKLDMRMNQTQELTAYDVVNDWSYEALVKIFYRYGEEKFSKQIARRIEAHREQQPIETTLELVDIIKEGIPAKARRKGGHPAKRIFQAIRIAVNDELSAFEDSIEQAIEHVKVKGRISVITFHSLEDRLCKQIFQEYEKGPDVPRGLPIIPEAYTPKLKRVNRKPITATDEDLDENNRARSAKLRVAEILK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 152976 153911 . - . GCA_005502385.1_01100_mRNA GCA_005502385.1_01100 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MFHHVSVMLKETIDELDIKEDGIYVDCTLGGAGHALYLLNQLNDDGRLIAIDQDTTALENAKEVLKDHLHKVTFVHNNFRELTDILKNLGIEKVDGIYYDLGVSSPQLDIPERGFSYHHDAKLDMRMNQTQELTAYDVVNDWSYEALVKIFYRYGEEKFSKQIARRIEAHREQQPIETTLELVDIIKEGIPAKARRKGGHPAKRIFQAIRIAVNDELSAFEDSIEQAIEHVKVKGRISVITFHSLEDRLCKQIFQEYEKGPDVPRGLPIIPEAYTPKLKRVNRKPITATDEDLDENNRARSAKLRVAEILK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 152976 153911 . - 0 GCA_005502385.1_01100 GCA_005502385.1_01100_gene,GCA_005502385.1_01100_mRNA GCA_005502385.1_01100 Ribosomal RNA small subunit methyltransferase H GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MFHHVSVMLKETIDELDIKEDGIYVDCTLGGAGHALYLLNQLNDDGRLIAIDQDTTALENAKEVLKDHLHKVTFVHNNFRELTDILKNLGIEKVDGIYYDLGVSSPQLDIPERGFSYHHDAKLDMRMNQTQELTAYDVVNDWSYEALVKIFYRYGEEKFSKQIARRIEAHREQQPIETTLELVDIIKEGIPAKARRKGGHPAKRIFQAIRIAVNDELSAFEDSIEQAIEHVKVKGRISVITFHSLEDRLCKQIFQEYEKGPDVPRGLPIIPEAYTPKLKRVNRKPITATDEDLDENNRARSAKLRVAEILK persistent 311 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH 2.1.1.199 GO:0005737,GO:0016434,GO:0070475,GO:0071424 COG0275,J UniRef50_Q07876,UniRef90_P60393 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 153926 154357 . - . GCA_005502385.1_01101_gene GCA_005502385.1_01101 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MFMGEYEHQLDAKGRMIIPSKFRYDLNERFIITRGLDKCLFGYTLEEWQQIEEKMKTLPMTKKDARKFMRMFFSGAIEVELDKQGRINIPQNLRKYANLTKECTVIGVSNRIEIWDRGTWNEFYEESEESFEDIAEDLIDFDF . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 153926 154357 . - . GCA_005502385.1_01101_mRNA GCA_005502385.1_01101 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MFMGEYEHQLDAKGRMIIPSKFRYDLNERFIITRGLDKCLFGYTLEEWQQIEEKMKTLPMTKKDARKFMRMFFSGAIEVELDKQGRINIPQNLRKYANLTKECTVIGVSNRIEIWDRGTWNEFYEESEESFEDIAEDLIDFDF . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 153926 154357 . - 0 GCA_005502385.1_01101 GCA_005502385.1_01101_gene,GCA_005502385.1_01101_mRNA GCA_005502385.1_01101 Transcriptional regulator MraZ GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MFMGEYEHQLDAKGRMIIPSKFRYDLNERFIITRGLDKCLFGYTLEEWQQIEEKMKTLPMTKKDARKFMRMFFSGAIEVELDKQGRINIPQNLRKYANLTKECTVIGVSNRIEIWDRGTWNEFYEESEESFEDIAEDLIDFDF persistent 143 mraZ division/cell wall cluster transcriptional repressor MraZ GO:0000976,GO:0003700,GO:0005737,GO:0006355,GO:0009295,GO:2000143 COG2001,J WP_017174536.1 UPI00036743F6 UniRef100_A0A2A1MHY6,UniRef50_Q8Y5L6,UniRef90_Q2FZ97 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 154500 156113 . - . GCA_005502385.1_01102_gene GCA_005502385.1_01102 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNCKVTNFQEKDSFITKLENSDETLLKFYQYNPVKPSSFNQRMNRPNNGREQQLAQVIKSYMSDLNITEIQQTHLTALSEGAKVVIGGQQAGLFGGPLYTFHKILSIVNLSRELTETYQQTVVPVFWIAGEDHDFEEVNHTYAYNAKDAQLHKVKYHTMTPPETSVSRYIPEKEQMIEALNQFFKELKETKHTNALYQLCLEIIEKYNNWTDIFKGLLQEVFKDYGVLFIDAQYEKIRELEKPLLKNIIQKHNEINQAFRKTQKLTTQSGLNKMIETDTNVHLFLHEDSMRQLIIKKDDVFKLSKSDITYNKDELLKLVEKEPTRFSNNVVTRPVMEEWLFNTVAFIGGPSEIKYWAELNEVFKILDVEMPIVLPRMKITYLPIRIEKLINQYKLNAENVIMNGIETDRENFVRSKASDTFIKKVESLKENHAKIYELLLKEVNDNHDNINLVKKNYDIHNKQFEYLLNRYLLNIERDNDISMKHFREIEHVLHPMGGLQERIWNPLQMMNEFGIDAFSPSTYPPLKYTFNQIVIKP . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 154500 156113 . - . GCA_005502385.1_01102_mRNA GCA_005502385.1_01102 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNCKVTNFQEKDSFITKLENSDETLLKFYQYNPVKPSSFNQRMNRPNNGREQQLAQVIKSYMSDLNITEIQQTHLTALSEGAKVVIGGQQAGLFGGPLYTFHKILSIVNLSRELTETYQQTVVPVFWIAGEDHDFEEVNHTYAYNAKDAQLHKVKYHTMTPPETSVSRYIPEKEQMIEALNQFFKELKETKHTNALYQLCLEIIEKYNNWTDIFKGLLQEVFKDYGVLFIDAQYEKIRELEKPLLKNIIQKHNEINQAFRKTQKLTTQSGLNKMIETDTNVHLFLHEDSMRQLIIKKDDVFKLSKSDITYNKDELLKLVEKEPTRFSNNVVTRPVMEEWLFNTVAFIGGPSEIKYWAELNEVFKILDVEMPIVLPRMKITYLPIRIEKLINQYKLNAENVIMNGIETDRENFVRSKASDTFIKKVESLKENHAKIYELLLKEVNDNHDNINLVKKNYDIHNKQFEYLLNRYLLNIERDNDISMKHFREIEHVLHPMGGLQERIWNPLQMMNEFGIDAFSPSTYPPLKYTFNQIVIKP . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 154500 156113 . - 0 GCA_005502385.1_01102 GCA_005502385.1_01102_gene,GCA_005502385.1_01102_mRNA GCA_005502385.1_01102 Putative cysteine ligase BshC GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNCKVTNFQEKDSFITKLENSDETLLKFYQYNPVKPSSFNQRMNRPNNGREQQLAQVIKSYMSDLNITEIQQTHLTALSEGAKVVIGGQQAGLFGGPLYTFHKILSIVNLSRELTETYQQTVVPVFWIAGEDHDFEEVNHTYAYNAKDAQLHKVKYHTMTPPETSVSRYIPEKEQMIEALNQFFKELKETKHTNALYQLCLEIIEKYNNWTDIFKGLLQEVFKDYGVLFIDAQYEKIRELEKPLLKNIIQKHNEINQAFRKTQKLTTQSGLNKMIETDTNVHLFLHEDSMRQLIIKKDDVFKLSKSDITYNKDELLKLVEKEPTRFSNNVVTRPVMEEWLFNTVAFIGGPSEIKYWAELNEVFKILDVEMPIVLPRMKITYLPIRIEKLINQYKLNAENVIMNGIETDRENFVRSKASDTFIKKVESLKENHAKIYELLLKEVNDNHDNINLVKKNYDIHNKQFEYLLNRYLLNIERDNDISMKHFREIEHVLHPMGGLQERIWNPLQMMNEFGIDAFSPSTYPPLKYTFNQIVIKP persistent 537 bshC bacillithiol biosynthesis cysteine-adding enzyme BshC GO:0003824,GO:0071793 UniRef50_Q2FZ98,UniRef90_A0A3S7GWS5 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 156494 157183 . - . GCA_005502385.1_01103_gene GCA_005502385.1_01103 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKYDTILLDFDDTIVDFFDAEDRAFHQMAHHFGHYPTEEDFQYFKKVNQNHWEAFQKNELSKEEVLTHRFINYFKEYGIDVDGKKADVLFRDELAKAPLKFFNSTLETIDRLSQECELFIVTNGVTDTQKRRIAQLEFKDILSGVYISEETGYQKPMSEFFDYIFERIGEEKRKTSIIVGDSLTSDILGGKNAGITTCWFNYRNKENNSDIVPDYEIQSLYELVNLVEE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 156494 157183 . - . GCA_005502385.1_01103_mRNA GCA_005502385.1_01103 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKYDTILLDFDDTIVDFFDAEDRAFHQMAHHFGHYPTEEDFQYFKKVNQNHWEAFQKNELSKEEVLTHRFINYFKEYGIDVDGKKADVLFRDELAKAPLKFFNSTLETIDRLSQECELFIVTNGVTDTQKRRIAQLEFKDILSGVYISEETGYQKPMSEFFDYIFERIGEEKRKTSIIVGDSLTSDILGGKNAGITTCWFNYRNKENNSDIVPDYEIQSLYELVNLVEE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 156494 157183 . - 0 GCA_005502385.1_01103 GCA_005502385.1_01103_gene,GCA_005502385.1_01103_mRNA GCA_005502385.1_01103 Putative HAD-hydrolase YfnB GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKYDTILLDFDDTIVDFFDAEDRAFHQMAHHFGHYPTEEDFQYFKKVNQNHWEAFQKNELSKEEVLTHRFINYFKEYGIDVDGKKADVLFRDELAKAPLKFFNSTLETIDRLSQECELFIVTNGVTDTQKRRIAQLEFKDILSGVYISEETGYQKPMSEFFDYIFERIGEEKRKTSIIVGDSLTSDILGGKNAGITTCWFNYRNKENNSDIVPDYEIQSLYELVNLVEE persistent 229 yjjG YjjG family noncanonical pyrimidine nucleotidase 3.1.3.5 GO:0008253 WP_002448764.1 UPI00019FC98A UniRef100_A0A1L8YA34,UniRef50_Q2FZA2,UniRef90_A0A1L8YA34 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 157309 157443 . - . GCA_005502385.1_01104_gene GCA_005502385.1_01104 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTKLAEAIANTVTAAQNQDWTKLGTSIVDIVSSGASVLGKVFGF . . . YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0001 persistent . GCA_005502385.1|SCOV01000002.1 prokka mRNA 157309 157443 . - . GCA_005502385.1_01104_mRNA GCA_005502385.1_01104 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTKLAEAIANTVTAAQNQDWTKLGTSIVDIVSSGASVLGKVFGF . . . YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0001 persistent . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 157309 157443 . - 0 GCA_005502385.1_01104 GCA_005502385.1_01104_gene,GCA_005502385.1_01104_mRNA GCA_005502385.1_01104 Antibacterial protein 3 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTKLAEAIANTVTAAQNQDWTKLGTSIVDIVSSGASVLGKVFGF persistent 44 Beta-class phenol-soluble modulin WP_002488710.1 UPI00024E1F4D UniRef100_A0A1K1VTZ7,UniRef50_P11699,UniRef90_A0A1K1VTZ7 . . . YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0001 persistent P.P-G GCA_005502385.1|SCOV01000002.1 prokka gene 157486 157620 . - . GCA_005502385.1_01105_gene GCA_005502385.1_01105 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDKLFDAIKNTVDAGINQDWTKLGTSIVDIVSNGVSILGKYLGF . . . YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0002 persistent . GCA_005502385.1|SCOV01000002.1 prokka mRNA 157486 157620 . - . GCA_005502385.1_01105_mRNA GCA_005502385.1_01105 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDKLFDAIKNTVDAGINQDWTKLGTSIVDIVSNGVSILGKYLGF . . . YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0002 persistent . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 157486 157620 . - 0 GCA_005502385.1_01105 GCA_005502385.1_01105_gene,GCA_005502385.1_01105_mRNA GCA_005502385.1_01105 Antibacterial protein 2 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDKLFDAIKNTVDAGINQDWTKLGTSIVDIVSNGVSILGKYLGF persistent 44 Beta-class phenol-soluble modulin WP_054105446.1 UPI0006B9827F UniRef100_A0A8I0WAS3,UniRef50_A0A380G3B4,UniRef90_A0A6N0I3Y2 . . . YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0002 persistent P.P-GN GCA_005502385.1|SCOV01000002.1 prokka gene 157655 157789 . - . GCA_005502385.1_01106_gene GCA_005502385.1_01106 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTKLVEAIKNTVDAAQSQDWTKLGTSIVDIVSSGVGILSKVFGF YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0001 persistent YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0003 persistent . GCA_005502385.1|SCOV01000002.1 prokka mRNA 157655 157789 . - . GCA_005502385.1_01106_mRNA GCA_005502385.1_01106 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTKLVEAIKNTVDAAQSQDWTKLGTSIVDIVSSGVGILSKVFGF YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0001 persistent YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0003 persistent . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 157655 157789 . - 0 GCA_005502385.1_01106 GCA_005502385.1_01106_gene,GCA_005502385.1_01106_mRNA GCA_005502385.1_01106 Antibacterial protein 3 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTKLVEAIKNTVDAAQSQDWTKLGTSIVDIVSSGVGILSKVFGF persistent 44 Beta-class phenol-soluble modulin WP_017174533.1 UPI0002F02A51 UniRef100_A0A4Q9WSR8,UniRef50_A0A0M2NX06,UniRef90_A0A974L0D4 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0001 persistent YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0003 persistent PPP-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 157832 157966 . - . GCA_005502385.1_01107_gene GCA_005502385.1_01107 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDKLFDAIKNTVDAGINHDWTKLGTSIVDIVSNGVSILGKYLGF YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0002 persistent YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0004 persistent . GCA_005502385.1|SCOV01000002.1 prokka mRNA 157832 157966 . - . GCA_005502385.1_01107_mRNA GCA_005502385.1_01107 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDKLFDAIKNTVDAGINHDWTKLGTSIVDIVSNGVSILGKYLGF YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0002 persistent YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0004 persistent . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 157832 157966 . - 0 GCA_005502385.1_01107 GCA_005502385.1_01107_gene,GCA_005502385.1_01107_mRNA GCA_005502385.1_01107 Antibacterial protein 2 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDKLFDAIKNTVDAGINHDWTKLGTSIVDIVSNGVSILGKYLGF persistent 44 Beta-class phenol-soluble modulin WP_048762353.1 UPI00066132A1 UniRef100_A0A6N0I3Y2,UniRef50_A0A380G3B4,UniRef90_A0A6N0I3Y2 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0002 persistent YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0004 persistent PPP-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 158007 158141 . - . GCA_005502385.1_01108_gene GCA_005502385.1_01108 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEGLFNAIKDTVTAGINGDWTKLGTSIVGIVENGVGLVSKYLGF YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0003 persistent YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0005 persistent . GCA_005502385.1|SCOV01000002.1 prokka mRNA 158007 158141 . - . GCA_005502385.1_01108_mRNA GCA_005502385.1_01108 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEGLFNAIKDTVTAGINGDWTKLGTSIVGIVENGVGLVSKYLGF YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0003 persistent YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0005 persistent . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 158007 158141 . - 0 GCA_005502385.1_01108 GCA_005502385.1_01108_gene,GCA_005502385.1_01108_mRNA GCA_005502385.1_01108 Antibacterial protein 3 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEGLFNAIKDTVTAGINGDWTKLGTSIVGIVENGVGLVSKYLGF persistent 44 Hemolytic protein WP_017174531.1 UPI0002F2BE01 UniRef100_A0A4Q9WTX4,UniRef50_A0A380G3B4,UniRef90_A0A380G3B4 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0003 persistent YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0005 persistent PPP-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 158574 159329 . + . GCA_005502385.1_01109_gene GCA_005502385.1_01109 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKYFILLFSSFLILSACDNDFSLTGDNKKEQNDTNNKKEKEDKHISKSDKNSIEHNDKTIQNQNTENTSNEQKSNEERDSKDTIEDVSSQNNNQIDFSNIKDRSTLESIIYGNYSEEQKIQAYNSAVANGIIPQGNVMEGPASVAYQSSLRVENGQEKSIYDRPNESDVSVDDENATPDPNAEINAAETEDEYYDALRKKYNGGLSSGELQTKHAIEQGYYEGDDAEEVYQNIKEQEADIAAGKWDKYNN YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0004 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0006 shell . GCA_005502385.1|SCOV01000002.1 prokka mRNA 158574 159329 . + . GCA_005502385.1_01109_mRNA GCA_005502385.1_01109 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKYFILLFSSFLILSACDNDFSLTGDNKKEQNDTNNKKEKEDKHISKSDKNSIEHNDKTIQNQNTENTSNEQKSNEERDSKDTIEDVSSQNNNQIDFSNIKDRSTLESIIYGNYSEEQKIQAYNSAVANGIIPQGNVMEGPASVAYQSSLRVENGQEKSIYDRPNESDVSVDDENATPDPNAEINAAETEDEYYDALRKKYNGGLSSGELQTKHAIEQGYYEGDDAEEVYQNIKEQEADIAAGKWDKYNN YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0004 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0006 shell . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 158574 159329 . + 0 GCA_005502385.1_01109 GCA_005502385.1_01109_gene,GCA_005502385.1_01109_mRNA GCA_005502385.1_01109 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKYFILLFSSFLILSACDNDFSLTGDNKKEQNDTNNKKEKEDKHISKSDKNSIEHNDKTIQNQNTENTSNEQKSNEERDSKDTIEDVSSQNNNQIDFSNIKDRSTLESIIYGNYSEEQKIQAYNSAVANGIIPQGNVMEGPASVAYQSSLRVENGQEKSIYDRPNESDVSVDDENATPDPNAEINAAETEDEYYDALRKKYNGGLSSGELQTKHAIEQGYYEGDDAEEVYQNIKEQEADIAAGKWDKYNN shell 251 Lipoprotein WP_017174530.1 UPI00030C330C UniRef100_A0A4Q9WSP6,UniRef50_B9DJI6,UniRef90_A0A6N0I3S1 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0004 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0006 shell FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 159983 160516 . - . GCA_005502385.1_01110_gene GCA_005502385.1_01110 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRKQIEELLKSEVTGYRIAKKTGIGESVISNLRSGKRNLDNISLKNAELLAQFKNDWDLYTNAKQIEVDPESEIEFVESLYTNYSMINTNNENNGYFISFESINKVEVNDKELFEIEFKYADEIEIEEDYFKDEVERAIWDNEEVEDRIFFKKYEEALSYLKMRYDIFTLEEVIETK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0005 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0007 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 159983 160516 . - . GCA_005502385.1_01110_mRNA GCA_005502385.1_01110 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRKQIEELLKSEVTGYRIAKKTGIGESVISNLRSGKRNLDNISLKNAELLAQFKNDWDLYTNAKQIEVDPESEIEFVESLYTNYSMINTNNENNGYFISFESINKVEVNDKELFEIEFKYADEIEIEEDYFKDEVERAIWDNEEVEDRIFFKKYEEALSYLKMRYDIFTLEEVIETK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0005 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0007 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 159983 160516 . - 0 GCA_005502385.1_01110 GCA_005502385.1_01110_gene,GCA_005502385.1_01110_mRNA GCA_005502385.1_01110 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRKQIEELLKSEVTGYRIAKKTGIGESVISNLRSGKRNLDNISLKNAELLAQFKNDWDLYTNAKQIEVDPESEIEFVESLYTNYSMINTNNENNGYFISFESINKVEVNDKELFEIEFKYADEIEIEEDYFKDEVERAIWDNEEVEDRIFFKKYEEALSYLKMRYDIFTLEEVIETK cloud 177 hypothetical protein WP_137689523.1 UPI0010F56989 UniRef100_UPI0010F56989,UniRef50_UPI001F0A4F96,UniRef90_UPI001F0A4F96 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0005 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0007 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 160694 162145 . - . GCA_005502385.1_01111_gene GCA_005502385.1_01111 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLMTRKQAENWLDNSEGRQYNADGYYGFQCYDYSKMYFYVVTGEWIGGLKASNIPFDNKAKIEKYATIIKNYDSFLPQKGDIVCFPDKYGGGYGHTAVVTRATLTQFEVLEQNWFGNGWTDGVVKPGWGPETVSRRWHYYDNPMYFIRFNFPKNVNVAKKAKRKLTSKKASGEIKRKKIMIVAGHGYNDPGAVGNGTNERDFIRKNLTPKIADYLRKTGHEVALYGGSKQSQDMYQDTAYGVRVGNKRDYGMYWVNKQNYDLIVEFHLDAAGASASGGHVIISSAFSPDEIDKDLQEVIKNNLGQIRGITKRSDLLHANVSAEINMNYRLAELGFITNKEDMDWIKKNSDKYAKLIAGAIHGSPIGGVVASKKKSSSKKLNVPKTIPNGYKLNDKGVPYKKEKGRYTVTTIKGNNVRTTYSDKAKITGTLPNGEEIIYDGAFAVNGYRWITYLNDDLKRRYIATGEIDKNGKRISSYGKFSKV YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0006 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0008 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 160694 162145 . - . GCA_005502385.1_01111_mRNA GCA_005502385.1_01111 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLMTRKQAENWLDNSEGRQYNADGYYGFQCYDYSKMYFYVVTGEWIGGLKASNIPFDNKAKIEKYATIIKNYDSFLPQKGDIVCFPDKYGGGYGHTAVVTRATLTQFEVLEQNWFGNGWTDGVVKPGWGPETVSRRWHYYDNPMYFIRFNFPKNVNVAKKAKRKLTSKKASGEIKRKKIMIVAGHGYNDPGAVGNGTNERDFIRKNLTPKIADYLRKTGHEVALYGGSKQSQDMYQDTAYGVRVGNKRDYGMYWVNKQNYDLIVEFHLDAAGASASGGHVIISSAFSPDEIDKDLQEVIKNNLGQIRGITKRSDLLHANVSAEINMNYRLAELGFITNKEDMDWIKKNSDKYAKLIAGAIHGSPIGGVVASKKKSSSKKLNVPKTIPNGYKLNDKGVPYKKEKGRYTVTTIKGNNVRTTYSDKAKITGTLPNGEEIIYDGAFAVNGYRWITYLNDDLKRRYIATGEIDKNGKRISSYGKFSKV YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0006 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0008 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 160694 162145 . - 0 GCA_005502385.1_01111 GCA_005502385.1_01111_gene,GCA_005502385.1_01111_mRNA GCA_005502385.1_01111 putative autolysin PH GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLMTRKQAENWLDNSEGRQYNADGYYGFQCYDYSKMYFYVVTGEWIGGLKASNIPFDNKAKIEKYATIIKNYDSFLPQKGDIVCFPDKYGGGYGHTAVVTRATLTQFEVLEQNWFGNGWTDGVVKPGWGPETVSRRWHYYDNPMYFIRFNFPKNVNVAKKAKRKLTSKKASGEIKRKKIMIVAGHGYNDPGAVGNGTNERDFIRKNLTPKIADYLRKTGHEVALYGGSKQSQDMYQDTAYGVRVGNKRDYGMYWVNKQNYDLIVEFHLDAAGASASGGHVIISSAFSPDEIDKDLQEVIKNNLGQIRGITKRSDLLHANVSAEINMNYRLAELGFITNKEDMDWIKKNSDKYAKLIAGAIHGSPIGGVVASKKKSSSKKLNVPKTIPNGYKLNDKGVPYKKEKGRYTVTTIKGNNVRTTYSDKAKITGTLPNGEEIIYDGAFAVNGYRWITYLNDDLKRRYIATGEIDKNGKRISSYGKFSKV cloud 483 N-acetylmuramoyl-L-alanine amidase 3.5.1.28 UniRef50_Q2FYD8,UniRef90_H9A0X4 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0006 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0008 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 162156 162449 . - . GCA_005502385.1_01112_gene GCA_005502385.1_01112 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEVKVIVRYIVLIMAIVNQFLANRGLSPIPVDEETISTIVLAGIGLYTAWKDNPTSKEGQWANKKLKKYKAEKKYRQATGQAPTKEYIEPSDLDELG YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0007 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0009 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 162156 162449 . - . GCA_005502385.1_01112_mRNA GCA_005502385.1_01112 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEVKVIVRYIVLIMAIVNQFLANRGLSPIPVDEETISTIVLAGIGLYTAWKDNPTSKEGQWANKKLKKYKAEKKYRQATGQAPTKEYIEPSDLDELG YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0007 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0009 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 162156 162449 . - 0 GCA_005502385.1_01112 GCA_005502385.1_01112_gene,GCA_005502385.1_01112_mRNA GCA_005502385.1_01112 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEVKVIVRYIVLIMAIVNQFLANRGLSPIPVDEETISTIVLAGIGLYTAWKDNPTSKEGQWANKKLKKYKAEKKYRQATGQAPTKEYIEPSDLDELG cloud 97 phage holin GO:0140911 WP_071859722.1 UPI0008FFFCA4 UniRef100_UPI0008FFFCA4,UniRef50_M1T2Y5,UniRef90_H9A0X3 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0007 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0009 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 162502 163122 . - . GCA_005502385.1_01113_gene GCA_005502385.1_01113 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTDLYSSMIELQGKENDWSIEMNTNKSNVLSFAPHGGGIEAGSSELALLISQKLDCNYFTFKGKLPSDNVKLHVTSTRYDNPELLNLMRNIDYSISVHGYADNEYARTLIGGSNEELKTLIKCNLINRGFDVQDAPTKLGGAKPNNITNKTKTGLGVQLELSTKQRKSFFSNNDFSKKVREDRYRWRAVMYEYAQAIEYAVKEYLA YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0008 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0010 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 162502 163122 . - . GCA_005502385.1_01113_mRNA GCA_005502385.1_01113 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTDLYSSMIELQGKENDWSIEMNTNKSNVLSFAPHGGGIEAGSSELALLISQKLDCNYFTFKGKLPSDNVKLHVTSTRYDNPELLNLMRNIDYSISVHGYADNEYARTLIGGSNEELKTLIKCNLINRGFDVQDAPTKLGGAKPNNITNKTKTGLGVQLELSTKQRKSFFSNNDFSKKVREDRYRWRAVMYEYAQAIEYAVKEYLA YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0008 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0010 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 162502 163122 . - 0 GCA_005502385.1_01113 GCA_005502385.1_01113_gene,GCA_005502385.1_01113_mRNA GCA_005502385.1_01113 hypothetical protein UPF0714 protein YndL GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTDLYSSMIELQGKENDWSIEMNTNKSNVLSFAPHGGGIEAGSSELALLISQKLDCNYFTFKGKLPSDNVKLHVTSTRYDNPELLNLMRNIDYSISVHGYADNEYARTLIGGSNEELKTLIKCNLINRGFDVQDAPTKLGGAKPNNITNKTKTGLGVQLELSTKQRKSFFSNNDFSKKVREDRYRWRAVMYEYAQAIEYAVKEYLA cloud 206 Phage-related replication protein UniRef50_H9A0X2,UniRef90_H9A0X2 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0008 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0010 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 163177 163320 . - . GCA_005502385.1_01114_gene GCA_005502385.1_01114 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRNIGIRYYKMGLYNEEQFALFVKRGFVTEEEFKELTGQEYQNVVKE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0009 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0011 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 163177 163320 . - . GCA_005502385.1_01114_mRNA GCA_005502385.1_01114 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRNIGIRYYKMGLYNEEQFALFVKRGFVTEEEFKELTGQEYQNVVKE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0009 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0011 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 163177 163320 . - 0 GCA_005502385.1_01114 GCA_005502385.1_01114_gene,GCA_005502385.1_01114_mRNA GCA_005502385.1_01114 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRNIGIRYYKMGLYNEEQFALFVKRGFVTEEEFKELTGQEYQNVVKE cloud 47 xkdX XkdX family protein UniRef50_H9A137,UniRef90_H9A0Q0 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0009 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0011 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 163313 163657 . - . GCA_005502385.1_01115_gene GCA_005502385.1_01115 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEIKQIYFYDGTPFLVMENKDGELEYPKEQWTDIAPPEGLYEPIHFDGEKWVGTPYEEWLEQQPKIEVEETPDDKDVLIADLTLQLMETQNTVVNLQNDMASLTLQVLESDINA YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0010 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0012 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 163313 163657 . - . GCA_005502385.1_01115_mRNA GCA_005502385.1_01115 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEIKQIYFYDGTPFLVMENKDGELEYPKEQWTDIAPPEGLYEPIHFDGEKWVGTPYEEWLEQQPKIEVEETPDDKDVLIADLTLQLMETQNTVVNLQNDMASLTLQVLESDINA YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0010 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0012 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 163313 163657 . - 0 GCA_005502385.1_01115 GCA_005502385.1_01115_gene,GCA_005502385.1_01115_mRNA GCA_005502385.1_01115 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEIKQIYFYDGTPFLVMENKDGELEYPKEQWTDIAPPEGLYEPIHFDGEKWVGTPYEEWLEQQPKIEVEETPDDKDVLIADLTLQLMETQNTVVNLQNDMASLTLQVLESDINA cloud 114 tail fiber protein UniRef50_H9A136,UniRef90_UPI000CD26DB6 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0010 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0012 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 163671 165035 . - . GCA_005502385.1_01116_gene GCA_005502385.1_01116 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 METFKQGKVIARIDERGIDLGNINVNLYTMDNSTSALDIHIKKRNIFSEEKEFIPVNLNQTTFKPVLHLIAEDGSIFTNEELEVVKAEEGHVRYNVSDYVTRHVGRVQAKLFLIDEDSSNDSSHVADFYFKVNDSGLTKAIGKEIHVDMLDDIVERILLKDIERFRGPQGDKGDPFKYGDFTQEQLNSLKGDKGDPFTFEDFTQEQIQSLKGDKGDPFTYEDFTQEQLDKLKPELPNFSNWQKYKLTNDDGTNFYDANLQIDFNNNEQLTSLPIGTRYVVLTLNNPSGTNSNGWLTKYKRDGEAALIQYQPYNSTVIYQKRFYRSWSDWERVGSDVVDTGWLPLPLINGVSQAGSANQPKYRLVSINDTDLLFFKGAVKNISSRTMAFAKLPTNISQKISNYSEYSKVGINPYINTSVIYNITMTTSGKLEIIFDPNSTANANEPYYIDGIIPL YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0011 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0013 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 163671 165035 . - . GCA_005502385.1_01116_mRNA GCA_005502385.1_01116 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 METFKQGKVIARIDERGIDLGNINVNLYTMDNSTSALDIHIKKRNIFSEEKEFIPVNLNQTTFKPVLHLIAEDGSIFTNEELEVVKAEEGHVRYNVSDYVTRHVGRVQAKLFLIDEDSSNDSSHVADFYFKVNDSGLTKAIGKEIHVDMLDDIVERILLKDIERFRGPQGDKGDPFKYGDFTQEQLNSLKGDKGDPFTFEDFTQEQIQSLKGDKGDPFTYEDFTQEQLDKLKPELPNFSNWQKYKLTNDDGTNFYDANLQIDFNNNEQLTSLPIGTRYVVLTLNNPSGTNSNGWLTKYKRDGEAALIQYQPYNSTVIYQKRFYRSWSDWERVGSDVVDTGWLPLPLINGVSQAGSANQPKYRLVSINDTDLLFFKGAVKNISSRTMAFAKLPTNISQKISNYSEYSKVGINPYINTSVIYNITMTTSGKLEIIFDPNSTANANEPYYIDGIIPL YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0011 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0013 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 163671 165035 . - 0 GCA_005502385.1_01116 GCA_005502385.1_01116_gene,GCA_005502385.1_01116_mRNA GCA_005502385.1_01116 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 METFKQGKVIARIDERGIDLGNINVNLYTMDNSTSALDIHIKKRNIFSEEKEFIPVNLNQTTFKPVLHLIAEDGSIFTNEELEVVKAEEGHVRYNVSDYVTRHVGRVQAKLFLIDEDSSNDSSHVADFYFKVNDSGLTKAIGKEIHVDMLDDIVERILLKDIERFRGPQGDKGDPFKYGDFTQEQLNSLKGDKGDPFTFEDFTQEQIQSLKGDKGDPFTYEDFTQEQLDKLKPELPNFSNWQKYKLTNDDGTNFYDANLQIDFNNNEQLTSLPIGTRYVVLTLNNPSGTNSNGWLTKYKRDGEAALIQYQPYNSTVIYQKRFYRSWSDWERVGSDVVDTGWLPLPLINGVSQAGSANQPKYRLVSINDTDLLFFKGAVKNISSRTMAFAKLPTNISQKISNYSEYSKVGINPYINTSVIYNITMTTSGKLEIIFDPNSTANANEPYYIDGIIPL cloud 454 bppU BppU family phage baseplate upper protein UniRef50_UPI000EB68C5A YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0011 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0013 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 165088 167025 . - . GCA_005502385.1_01117_gene GCA_005502385.1_01117 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAILPSSGKPTAKQVVAWAKWLADNKLGVDVDKRLGFQCWDLPNYIFDRYWGFRTYGNADAMARRDQYPNSTWKIYANTPSFVPKPGDVVCWTYGAYGHTAIVVGPSDTNTFTSIDQNWYGANHWYGSKAAYVKHSYSGMGGNLYFIRPPYKEEPKTETPPKDTTPSQDKGNTSSDKPTSETKKEPLKEQKVITVTAEDDEKVDYPRFIPHRIANGEVRGHKPKGLAVKNAGTMCSVQQMYYDRNKYISNSEYPHFYIDRHHIWQPRYTDVKVPSEPDYIVIEVCGDYSDTKTDFLLNELHAIIFGVGELKGYNIPLKRSSLKVSDDLWRTVMEHGNFDPLIDGKPSSKVLDKVEQSLLNLYTNKDKLLKNIKSGKTTKIDIKVDKKQKSSSSTSSSSTAKPSTSTSTSTTSKVSSKPKVIVVYSNYTFTQAVNIQMTKWPQINYGSGWYNAGRADTLKAMNSLEIWNSSSQKYQMLNLGKYQGISVSKLNSILKGKGTLSGQGKAVSDGCKKYNVNEIYLISHAFLESGYGRSNFASGVYGAYNYFGIGAYDNNPNYAMTFAKNEGWTTPAKAIIGGAKFVRQGYIDRGQQTLYRMRWNPQSPGNHQYATDVRWAQHQANTIKSLYDEIGLKGEHFIRDRYKRT YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0012 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0014 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 165088 167025 . - . GCA_005502385.1_01117_mRNA GCA_005502385.1_01117 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAILPSSGKPTAKQVVAWAKWLADNKLGVDVDKRLGFQCWDLPNYIFDRYWGFRTYGNADAMARRDQYPNSTWKIYANTPSFVPKPGDVVCWTYGAYGHTAIVVGPSDTNTFTSIDQNWYGANHWYGSKAAYVKHSYSGMGGNLYFIRPPYKEEPKTETPPKDTTPSQDKGNTSSDKPTSETKKEPLKEQKVITVTAEDDEKVDYPRFIPHRIANGEVRGHKPKGLAVKNAGTMCSVQQMYYDRNKYISNSEYPHFYIDRHHIWQPRYTDVKVPSEPDYIVIEVCGDYSDTKTDFLLNELHAIIFGVGELKGYNIPLKRSSLKVSDDLWRTVMEHGNFDPLIDGKPSSKVLDKVEQSLLNLYTNKDKLLKNIKSGKTTKIDIKVDKKQKSSSSTSSSSTAKPSTSTSTSTTSKVSSKPKVIVVYSNYTFTQAVNIQMTKWPQINYGSGWYNAGRADTLKAMNSLEIWNSSSQKYQMLNLGKYQGISVSKLNSILKGKGTLSGQGKAVSDGCKKYNVNEIYLISHAFLESGYGRSNFASGVYGAYNYFGIGAYDNNPNYAMTFAKNEGWTTPAKAIIGGAKFVRQGYIDRGQQTLYRMRWNPQSPGNHQYATDVRWAQHQANTIKSLYDEIGLKGEHFIRDRYKRT YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0012 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0014 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 165088 167025 . - 0 GCA_005502385.1_01117 GCA_005502385.1_01117_gene,GCA_005502385.1_01117_mRNA GCA_005502385.1_01117 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAILPSSGKPTAKQVVAWAKWLADNKLGVDVDKRLGFQCWDLPNYIFDRYWGFRTYGNADAMARRDQYPNSTWKIYANTPSFVPKPGDVVCWTYGAYGHTAIVVGPSDTNTFTSIDQNWYGANHWYGSKAAYVKHSYSGMGGNLYFIRPPYKEEPKTETPPKDTTPSQDKGNTSSDKPTSETKKEPLKEQKVITVTAEDDEKVDYPRFIPHRIANGEVRGHKPKGLAVKNAGTMCSVQQMYYDRNKYISNSEYPHFYIDRHHIWQPRYTDVKVPSEPDYIVIEVCGDYSDTKTDFLLNELHAIIFGVGELKGYNIPLKRSSLKVSDDLWRTVMEHGNFDPLIDGKPSSKVLDKVEQSLLNLYTNKDKLLKNIKSGKTTKIDIKVDKKQKSSSSTSSSSTAKPSTSTSTSTTSKVSSKPKVIVVYSNYTFTQAVNIQMTKWPQINYGSGWYNAGRADTLKAMNSLEIWNSSSQKYQMLNLGKYQGISVSKLNSILKGKGTLSGQGKAVSDGCKKYNVNEIYLISHAFLESGYGRSNFASGVYGAYNYFGIGAYDNNPNYAMTFAKNEGWTTPAKAIIGGAKFVRQGYIDRGQQTLYRMRWNPQSPGNHQYATDVRWAQHQANTIKSLYDEIGLKGEHFIRDRYKRT cloud 645 Peptidoglycan hydrolase 3.2.1.96 UniRef50_Q4L3Y2,UniRef90_H9A0P7 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0012 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0014 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 167079 167465 . - . GCA_005502385.1_01118_gene GCA_005502385.1_01118 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSEENDYVKRHEFERSNGKIYERINQTDKQIIALNGKIDTQNAIQEKNYQSQERSEKHLEKISGEITSFKDGFNEVKNQVDKHSDELDKINATVSDKQKWNVGIATAIISGIFALLGTAMQLAPLIFK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0013 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0015 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 167079 167465 . - . GCA_005502385.1_01118_mRNA GCA_005502385.1_01118 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSEENDYVKRHEFERSNGKIYERINQTDKQIIALNGKIDTQNAIQEKNYQSQERSEKHLEKISGEITSFKDGFNEVKNQVDKHSDELDKINATVSDKQKWNVGIATAIISGIFALLGTAMQLAPLIFK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0013 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0015 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 167079 167465 . - 0 GCA_005502385.1_01118 GCA_005502385.1_01118_gene,GCA_005502385.1_01118_mRNA GCA_005502385.1_01118 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSEENDYVKRHEFERSNGKIYERINQTDKQIIALNGKIDTQNAIQEKNYQSQERSEKHLEKISGEITSFKDGFNEVKNQVDKHSDELDKINATVSDKQKWNVGIATAIISGIFALLGTAMQLAPLIFK cloud 128 hypothetical protein UniRef50_A0A1W6JNR6,UniRef90_UPI0010ACBF3E YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0013 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0015 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 167449 167868 . - . GCA_005502385.1_01119_gene GCA_005502385.1_01119 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKNTILYSLAVVLLSGIGLLEFERGFFWTKEQNDILDDSDFYLALHHIMPIWVWGVLGMICSIFIIIAPFFLPKQKLNHIFDYLILIGGCGNAIFYFFMTSASVYNAINWLSPLQFATITMINVGLAFFGGAEIVRRK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0014 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0016 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 167449 167868 . - . GCA_005502385.1_01119_mRNA GCA_005502385.1_01119 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKNTILYSLAVVLLSGIGLLEFERGFFWTKEQNDILDDSDFYLALHHIMPIWVWGVLGMICSIFIIIAPFFLPKQKLNHIFDYLILIGGCGNAIFYFFMTSASVYNAINWLSPLQFATITMINVGLAFFGGAEIVRRK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0014 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0016 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 167449 167868 . - 0 GCA_005502385.1_01119 GCA_005502385.1_01119_gene,GCA_005502385.1_01119_mRNA GCA_005502385.1_01119 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKKNTILYSLAVVLLSGIGLLEFERGFFWTKEQNDILDDSDFYLALHHIMPIWVWGVLGMICSIFIIIAPFFLPKQKLNHIFDYLILIGGCGNAIFYFFMTSASVYNAINWLSPLQFATITMINVGLAFFGGAEIVRRK cloud 139 Phage protein WP_137689531.1 UPI0010F7CB27 UniRef100_UPI0010F7CB27,UniRef50_A0A653ZDG2,UniRef90_UPI0010AD1224 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0014 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0016 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 167889 169085 . - . GCA_005502385.1_01120_gene GCA_005502385.1_01120 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDGLKKEAKITVVDEPRLNPITDENIGFYNMDINTAVLTFQVRKQDYPLEISKVNTDIYAYFVSDNGSSTGRVQVDYVNPMQGIIQLTLDNDFLKAATDTYVTGQIYIKAVGRKDTVVLNEFRFYVKDALINQIDADIKISYIREIDDLIDNFKKKIENVSQNFSDIETAQADFTAFVNAQKNTFIKQVNDMKNEMNAFANNTQKDLIDRLNSIDDKMLQTLSELENGTENFVTEDELNTLLANYPTNEQLTTQLNGKANVGDVTGNQSVELPDFDVIIKEKVDEALANATLQRFTFTDNNGYIPRIDNPDLYTMSGIDTSGFYYAYNPVNSPDPNNQSGYLLVMARSSSYKKVLFFPFNRHVFYSRNKMGDTTGWGNWYDATNNINVGEMIADVDEI YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0015 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0017 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 167889 169085 . - . GCA_005502385.1_01120_mRNA GCA_005502385.1_01120 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDGLKKEAKITVVDEPRLNPITDENIGFYNMDINTAVLTFQVRKQDYPLEISKVNTDIYAYFVSDNGSSTGRVQVDYVNPMQGIIQLTLDNDFLKAATDTYVTGQIYIKAVGRKDTVVLNEFRFYVKDALINQIDADIKISYIREIDDLIDNFKKKIENVSQNFSDIETAQADFTAFVNAQKNTFIKQVNDMKNEMNAFANNTQKDLIDRLNSIDDKMLQTLSELENGTENFVTEDELNTLLANYPTNEQLTTQLNGKANVGDVTGNQSVELPDFDVIIKEKVDEALANATLQRFTFTDNNGYIPRIDNPDLYTMSGIDTSGFYYAYNPVNSPDPNNQSGYLLVMARSSSYKKVLFFPFNRHVFYSRNKMGDTTGWGNWYDATNNINVGEMIADVDEI YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0015 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0017 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 167889 169085 . - 0 GCA_005502385.1_01120 GCA_005502385.1_01120_gene,GCA_005502385.1_01120_mRNA GCA_005502385.1_01120 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDGLKKEAKITVVDEPRLNPITDENIGFYNMDINTAVLTFQVRKQDYPLEISKVNTDIYAYFVSDNGSSTGRVQVDYVNPMQGIIQLTLDNDFLKAATDTYVTGQIYIKAVGRKDTVVLNEFRFYVKDALINQIDADIKISYIREIDDLIDNFKKKIENVSQNFSDIETAQADFTAFVNAQKNTFIKQVNDMKNEMNAFANNTQKDLIDRLNSIDDKMLQTLSELENGTENFVTEDELNTLLANYPTNEQLTTQLNGKANVGDVTGNQSVELPDFDVIIKEKVDEALANATLQRFTFTDNNGYIPRIDNPDLYTMSGIDTSGFYYAYNPVNSPDPNNQSGYLLVMARSSSYKKVLFFPFNRHVFYSRNKMGDTTGWGNWYDATNNINVGEMIADVDEI cloud 398 bppU BppU family phage baseplate upper protein UniRef50_A0A2J6P2C7,UniRef90_A0A8X8GQN7 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0015 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0017 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 169098 170972 . - . GCA_005502385.1_01121_gene GCA_005502385.1_01121 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRKTIYTDLDAIFGARFVRENELNFIATRDMLTNIEKLLDKHSRNETKAHTAEQIKYTLPTGPSTTVDKELRYQNERVRNLVLGNLGNGQQEVRDSRVSMDGQSHSLLSERLKHDFSYIEEETDKLMNVTDDPAYLFNPPYMKSAERGVNETPLSNDPTENLKAFYDVFVDNKYCFKKYIGKDQSGKYNVYSYTFEPEHYSKTVLVTCCIHGNEYSAFYAMSRFMNLVVNKWEKYPQLAYLRKNVRIVMVPIVNPWGFANQERENVNNVDLNRNFDYYWENGSGKSPSGKNYKGSKVFSERESRNMKTLVESLDEITAHMDCHNIVSQVSDYCLFYPRFANQPNNEMTQLLMELSNYGDYVTWGSSTLASFSNWVGITKGITSFLPEVYEGRAGKPRGAEEMWRSVYYLGNILLRLSSLYNGQNGRTANEPIVKSFVYSSRYNNSGVKPFSLIAKDGYQRMLMTQQRFKVTANGFVELNGSITVQLSKDTVFGVNPGVAQNYNPFSGNGKTRKRQLYKIEHKLPAGVHTIPLHAVAPVQFSTTTPDDVKRTNEVMAVVDVMRKEGYAKVLNMVLNVKFTPSHSHNAVQMFTSTGYGNQKEQTFKQIYPNKPAPFDVRNKIITKK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0016 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0018 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 169098 170972 . - . GCA_005502385.1_01121_mRNA GCA_005502385.1_01121 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRKTIYTDLDAIFGARFVRENELNFIATRDMLTNIEKLLDKHSRNETKAHTAEQIKYTLPTGPSTTVDKELRYQNERVRNLVLGNLGNGQQEVRDSRVSMDGQSHSLLSERLKHDFSYIEEETDKLMNVTDDPAYLFNPPYMKSAERGVNETPLSNDPTENLKAFYDVFVDNKYCFKKYIGKDQSGKYNVYSYTFEPEHYSKTVLVTCCIHGNEYSAFYAMSRFMNLVVNKWEKYPQLAYLRKNVRIVMVPIVNPWGFANQERENVNNVDLNRNFDYYWENGSGKSPSGKNYKGSKVFSERESRNMKTLVESLDEITAHMDCHNIVSQVSDYCLFYPRFANQPNNEMTQLLMELSNYGDYVTWGSSTLASFSNWVGITKGITSFLPEVYEGRAGKPRGAEEMWRSVYYLGNILLRLSSLYNGQNGRTANEPIVKSFVYSSRYNNSGVKPFSLIAKDGYQRMLMTQQRFKVTANGFVELNGSITVQLSKDTVFGVNPGVAQNYNPFSGNGKTRKRQLYKIEHKLPAGVHTIPLHAVAPVQFSTTTPDDVKRTNEVMAVVDVMRKEGYAKVLNMVLNVKFTPSHSHNAVQMFTSTGYGNQKEQTFKQIYPNKPAPFDVRNKIITKK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0016 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0018 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 169098 170972 . - 0 GCA_005502385.1_01121 GCA_005502385.1_01121_gene,GCA_005502385.1_01121_mRNA GCA_005502385.1_01121 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRKTIYTDLDAIFGARFVRENELNFIATRDMLTNIEKLLDKHSRNETKAHTAEQIKYTLPTGPSTTVDKELRYQNERVRNLVLGNLGNGQQEVRDSRVSMDGQSHSLLSERLKHDFSYIEEETDKLMNVTDDPAYLFNPPYMKSAERGVNETPLSNDPTENLKAFYDVFVDNKYCFKKYIGKDQSGKYNVYSYTFEPEHYSKTVLVTCCIHGNEYSAFYAMSRFMNLVVNKWEKYPQLAYLRKNVRIVMVPIVNPWGFANQERENVNNVDLNRNFDYYWENGSGKSPSGKNYKGSKVFSERESRNMKTLVESLDEITAHMDCHNIVSQVSDYCLFYPRFANQPNNEMTQLLMELSNYGDYVTWGSSTLASFSNWVGITKGITSFLPEVYEGRAGKPRGAEEMWRSVYYLGNILLRLSSLYNGQNGRTANEPIVKSFVYSSRYNNSGVKPFSLIAKDGYQRMLMTQQRFKVTANGFVELNGSITVQLSKDTVFGVNPGVAQNYNPFSGNGKTRKRQLYKIEHKLPAGVHTIPLHAVAPVQFSTTTPDDVKRTNEVMAVVDVMRKEGYAKVLNMVLNVKFTPSHSHNAVQMFTSTGYGNQKEQTFKQIYPNKPAPFDVRNKIITKK cloud 624 Zn carboxypeptidase UniRef50_H9A0W3,UniRef90_H9A0W3 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0016 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0018 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 170983 172233 . - . GCA_005502385.1_01122_gene GCA_005502385.1_01122 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPILVTPIRGRSIPLYVSTTETSKLGSDIVLQFEIVEDEFNYQIVRGLQKRWTISRVQGPKDKREYVVFIIDRQTHGKKQRVSVSCRYKPLDIIKHTRIYDTIDGSFTANNFLKRIFDGTGLKYKIDGSLGSSQFENAGEGESLEDLIKKFCSHFDVEFDIEFNNKKGTYTFVFTPFLNKNASYHIDDEINANNMKVEEDSSELYTYAVGYGDYDDEGGSTAAGFVMKFEHPSIKDYGRYDAPPIKDGRIKDEEVMHQKLQSLIESSVKTSISLDFIALNEHYPNAVPKVADIVKINHSILGINEFVRIVDVKTVRDKDNIIVKQDVTLGDFKRVDRYKKRVSEAAAAVGKLGGQNSFVHTYKVTTAKTNAAIKTTQRQQEDSTTKNIKATKEDGTVVNLSSADIVIDANGNLKLK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0017 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0019 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 170983 172233 . - . GCA_005502385.1_01122_mRNA GCA_005502385.1_01122 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPILVTPIRGRSIPLYVSTTETSKLGSDIVLQFEIVEDEFNYQIVRGLQKRWTISRVQGPKDKREYVVFIIDRQTHGKKQRVSVSCRYKPLDIIKHTRIYDTIDGSFTANNFLKRIFDGTGLKYKIDGSLGSSQFENAGEGESLEDLIKKFCSHFDVEFDIEFNNKKGTYTFVFTPFLNKNASYHIDDEINANNMKVEEDSSELYTYAVGYGDYDDEGGSTAAGFVMKFEHPSIKDYGRYDAPPIKDGRIKDEEVMHQKLQSLIESSVKTSISLDFIALNEHYPNAVPKVADIVKINHSILGINEFVRIVDVKTVRDKDNIIVKQDVTLGDFKRVDRYKKRVSEAAAAVGKLGGQNSFVHTYKVTTAKTNAAIKTTQRQQEDSTTKNIKATKEDGTVVNLSSADIVIDANGNLKLK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0017 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0019 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 170983 172233 . - 0 GCA_005502385.1_01122 GCA_005502385.1_01122_gene,GCA_005502385.1_01122_mRNA GCA_005502385.1_01122 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPILVTPIRGRSIPLYVSTTETSKLGSDIVLQFEIVEDEFNYQIVRGLQKRWTISRVQGPKDKREYVVFIIDRQTHGKKQRVSVSCRYKPLDIIKHTRIYDTIDGSFTANNFLKRIFDGTGLKYKIDGSLGSSQFENAGEGESLEDLIKKFCSHFDVEFDIEFNNKKGTYTFVFTPFLNKNASYHIDDEINANNMKVEEDSSELYTYAVGYGDYDDEGGSTAAGFVMKFEHPSIKDYGRYDAPPIKDGRIKDEEVMHQKLQSLIESSVKTSISLDFIALNEHYPNAVPKVADIVKINHSILGINEFVRIVDVKTVRDKDNIIVKQDVTLGDFKRVDRYKKRVSEAAAAVGKLGGQNSFVHTYKVTTAKTNAAIKTTQRQQEDSTTKNIKATKEDGTVVNLSSADIVIDANGNLKLK cloud 416 Endopeptidase UniRef50_A0A2J6P2B3,UniRef90_H9A0P3 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0017 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0019 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 172243 173199 . - . GCA_005502385.1_01123_gene GCA_005502385.1_01123 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDIEIKKKDGQRYTLNDFGFKVTNVTVESIEKETDYEKKENTSGRILLSSQYRKRTITVDCYVVSTKLNDNSRLRDEFYSLTNSNEPIHIRELRRTVPLNYRFVQPTEDDYQEIDEYNVLVFNHEPFNDNHYVNGRQYQVMCSDVVVPEENGRKINFSIKFETVELPFAESIGTSLELEKRPDRELWSNDMLIPFDEEDARRRYSFTNIYNNSVYYHGNVPNDQFNLFKKVTVVLGKDVKATEIFQFTLGNSDVMTIEGANLKKGDKIVYDGVQTFRNGVPINDLASNAQPKFYPGWNNFEFNQQVKSVTFDLKFYYL YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0018 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0020 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 172243 173199 . - . GCA_005502385.1_01123_mRNA GCA_005502385.1_01123 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDIEIKKKDGQRYTLNDFGFKVTNVTVESIEKETDYEKKENTSGRILLSSQYRKRTITVDCYVVSTKLNDNSRLRDEFYSLTNSNEPIHIRELRRTVPLNYRFVQPTEDDYQEIDEYNVLVFNHEPFNDNHYVNGRQYQVMCSDVVVPEENGRKINFSIKFETVELPFAESIGTSLELEKRPDRELWSNDMLIPFDEEDARRRYSFTNIYNNSVYYHGNVPNDQFNLFKKVTVVLGKDVKATEIFQFTLGNSDVMTIEGANLKKGDKIVYDGVQTFRNGVPINDLASNAQPKFYPGWNNFEFNQQVKSVTFDLKFYYL YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0018 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0020 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 172243 173199 . - 0 GCA_005502385.1_01123 GCA_005502385.1_01123_gene,GCA_005502385.1_01123_mRNA GCA_005502385.1_01123 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDIEIKKKDGQRYTLNDFGFKVTNVTVESIEKETDYEKKENTSGRILLSSQYRKRTITVDCYVVSTKLNDNSRLRDEFYSLTNSNEPIHIRELRRTVPLNYRFVQPTEDDYQEIDEYNVLVFNHEPFNDNHYVNGRQYQVMCSDVVVPEENGRKINFSIKFETVELPFAESIGTSLELEKRPDRELWSNDMLIPFDEEDARRRYSFTNIYNNSVYYHGNVPNDQFNLFKKVTVVLGKDVKATEIFQFTLGNSDVMTIEGANLKKGDKIVYDGVQTFRNGVPINDLASNAQPKFYPGWNNFEFNQQVKSVTFDLKFYYL cloud 318 Minor tail protein UniRef50_A0A1W6JNU3,UniRef90_H9A0W1 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0018 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0020 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 173212 177006 . - . GCA_005502385.1_01124_gene GCA_005502385.1_01124 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAEANYSIKAQIEANTRKFKSAIQSAKKVAQSFKKTQESIKDTKLDGDSSGVMKAVKAARDAVKGFDNTHADAELDADISDVRDKVAQAKTLVEKFDAYRGDAELDADVSKATANIKKVQKYLDMYENSDAEADADVNIRKAITHISELQHNLDGIDGSKYSAVLDADATRAREHIKMAKKQLNDFAHQKAKANLEVDSAGAIAHIKAFKAMLRSIPNRHRTRLEIDGGNSLGFFKSLGAAIDESTRTWDKLATKIRTIGTVLGNMIKGALISNITLLVPAIASVVPALMAVLNALGVVAGGALGLAGAFGVATAGVVGFGAMGISALTMLADGTLEATRETERYEAALDSLKSAWVGLIQQNQSQIFNTLANSIDTAKVALAGLTPFINGVSKGMEQASAKMLDWAKNSQVAQKFFEMMGTTGVRIFNNMLEAAGSFGSGLISVLTQIAPLAEWVSQGFKKMGQSFNEWAQSVEGQNAIKSFIEYTKQNLPLIGQIFGSTFRGIFNLMKAFAPNTHLVLQGLADMAKQFEQWSATIAESDGFKKFIEYVQENGPKLIQLLGNIINIIINVATAMAPFAAAVLDVAIAMTDFIESLTAAHPAIGIMLGLIATLAGIFMTLGPPILGAIDFIGTFVKAITGAGTVIEGFSVIGGIVADAMELVGAALVGIEGPALAVVAVVAAVIAIFVGLWNSSEVVRDAVTGAWKAISGAVGDAVKAVINFFKDLIGQMDYVKGAVESLGAMWDGFVTIVEGAIKLLSPLFESAFNAIVNTVKIAWEVIKAIITVAMHVIVGTITVLLQILTGDWQGAWQTLQEVGQAIWNAIVQAAVNIFNILKDVLSQSWQATVDMFSTIFGPLAEIASTIWNAIVQAILTVVVQLGVFLMTTWTNIVTVAQTMWTMLIAIAQTVWTAIVTAITTIVTTLGTILSTIWTGIVTVATTIWTTLVTVAQTIWTMLVTVITTVVQAILNVVTTVWTTLLSVTSSIMSAISSVISSIWSSIVSIISSIVSSIVSFVSSGWSTLMSVTSSIMSSISSVISSIWSSIVSFISSAVSRAVSFVTSGFHNMLSAIISAMSGMVSAVISGMSNVVNSVRNGVSNAVNAARSFIGHMRQVGVDLIQGMINGVVSMARNLVNAARNVVMGAVNAAKSALHIGSPSKLFKQFGVWTMEGLGIGINKEGKNVISGMGSMANSITEAFNSNLAVPDITSNMKKVNANMNAQVQHTHTVQTNPSQRVVRIEMDVNNEALAAIVNGQTANDDTVFSF YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0019 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0021 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 173212 177006 . - . GCA_005502385.1_01124_mRNA GCA_005502385.1_01124 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAEANYSIKAQIEANTRKFKSAIQSAKKVAQSFKKTQESIKDTKLDGDSSGVMKAVKAARDAVKGFDNTHADAELDADISDVRDKVAQAKTLVEKFDAYRGDAELDADVSKATANIKKVQKYLDMYENSDAEADADVNIRKAITHISELQHNLDGIDGSKYSAVLDADATRAREHIKMAKKQLNDFAHQKAKANLEVDSAGAIAHIKAFKAMLRSIPNRHRTRLEIDGGNSLGFFKSLGAAIDESTRTWDKLATKIRTIGTVLGNMIKGALISNITLLVPAIASVVPALMAVLNALGVVAGGALGLAGAFGVATAGVVGFGAMGISALTMLADGTLEATRETERYEAALDSLKSAWVGLIQQNQSQIFNTLANSIDTAKVALAGLTPFINGVSKGMEQASAKMLDWAKNSQVAQKFFEMMGTTGVRIFNNMLEAAGSFGSGLISVLTQIAPLAEWVSQGFKKMGQSFNEWAQSVEGQNAIKSFIEYTKQNLPLIGQIFGSTFRGIFNLMKAFAPNTHLVLQGLADMAKQFEQWSATIAESDGFKKFIEYVQENGPKLIQLLGNIINIIINVATAMAPFAAAVLDVAIAMTDFIESLTAAHPAIGIMLGLIATLAGIFMTLGPPILGAIDFIGTFVKAITGAGTVIEGFSVIGGIVADAMELVGAALVGIEGPALAVVAVVAAVIAIFVGLWNSSEVVRDAVTGAWKAISGAVGDAVKAVINFFKDLIGQMDYVKGAVESLGAMWDGFVTIVEGAIKLLSPLFESAFNAIVNTVKIAWEVIKAIITVAMHVIVGTITVLLQILTGDWQGAWQTLQEVGQAIWNAIVQAAVNIFNILKDVLSQSWQATVDMFSTIFGPLAEIASTIWNAIVQAILTVVVQLGVFLMTTWTNIVTVAQTMWTMLIAIAQTVWTAIVTAITTIVTTLGTILSTIWTGIVTVATTIWTTLVTVAQTIWTMLVTVITTVVQAILNVVTTVWTTLLSVTSSIMSAISSVISSIWSSIVSIISSIVSSIVSFVSSGWSTLMSVTSSIMSSISSVISSIWSSIVSFISSAVSRAVSFVTSGFHNMLSAIISAMSGMVSAVISGMSNVVNSVRNGVSNAVNAARSFIGHMRQVGVDLIQGMINGVVSMARNLVNAARNVVMGAVNAAKSALHIGSPSKLFKQFGVWTMEGLGIGINKEGKNVISGMGSMANSITEAFNSNLAVPDITSNMKKVNANMNAQVQHTHTVQTNPSQRVVRIEMDVNNEALAAIVNGQTANDDTVFSF YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0019 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0021 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 173212 177006 . - 0 GCA_005502385.1_01124 GCA_005502385.1_01124_gene,GCA_005502385.1_01124_mRNA GCA_005502385.1_01124 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAEANYSIKAQIEANTRKFKSAIQSAKKVAQSFKKTQESIKDTKLDGDSSGVMKAVKAARDAVKGFDNTHADAELDADISDVRDKVAQAKTLVEKFDAYRGDAELDADVSKATANIKKVQKYLDMYENSDAEADADVNIRKAITHISELQHNLDGIDGSKYSAVLDADATRAREHIKMAKKQLNDFAHQKAKANLEVDSAGAIAHIKAFKAMLRSIPNRHRTRLEIDGGNSLGFFKSLGAAIDESTRTWDKLATKIRTIGTVLGNMIKGALISNITLLVPAIASVVPALMAVLNALGVVAGGALGLAGAFGVATAGVVGFGAMGISALTMLADGTLEATRETERYEAALDSLKSAWVGLIQQNQSQIFNTLANSIDTAKVALAGLTPFINGVSKGMEQASAKMLDWAKNSQVAQKFFEMMGTTGVRIFNNMLEAAGSFGSGLISVLTQIAPLAEWVSQGFKKMGQSFNEWAQSVEGQNAIKSFIEYTKQNLPLIGQIFGSTFRGIFNLMKAFAPNTHLVLQGLADMAKQFEQWSATIAESDGFKKFIEYVQENGPKLIQLLGNIINIIINVATAMAPFAAAVLDVAIAMTDFIESLTAAHPAIGIMLGLIATLAGIFMTLGPPILGAIDFIGTFVKAITGAGTVIEGFSVIGGIVADAMELVGAALVGIEGPALAVVAVVAAVIAIFVGLWNSSEVVRDAVTGAWKAISGAVGDAVKAVINFFKDLIGQMDYVKGAVESLGAMWDGFVTIVEGAIKLLSPLFESAFNAIVNTVKIAWEVIKAIITVAMHVIVGTITVLLQILTGDWQGAWQTLQEVGQAIWNAIVQAAVNIFNILKDVLSQSWQATVDMFSTIFGPLAEIASTIWNAIVQAILTVVVQLGVFLMTTWTNIVTVAQTMWTMLIAIAQTVWTAIVTAITTIVTTLGTILSTIWTGIVTVATTIWTTLVTVAQTIWTMLVTVITTVVQAILNVVTTVWTTLLSVTSSIMSAISSVISSIWSSIVSIISSIVSSIVSFVSSGWSTLMSVTSSIMSSISSVISSIWSSIVSFISSAVSRAVSFVTSGFHNMLSAIISAMSGMVSAVISGMSNVVNSVRNGVSNAVNAARSFIGHMRQVGVDLIQGMINGVVSMARNLVNAARNVVMGAVNAAKSALHIGSPSKLFKQFGVWTMEGLGIGINKEGKNVISGMGSMANSITEAFNSNLAVPDITSNMKKVNANMNAQVQHTHTVQTNPSQRVVRIEMDVNNEALAAIVNGQTANDDTVFSF cloud 1264 phage tail protein UniRef50_A0A8X8GN49,UniRef90_UPI002878F77B YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0019 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0021 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 177011 177367 . - . GCA_005502385.1_01125_gene GCA_005502385.1_01125 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKLKIYDLKRIEMMTLTEFNYRMWAYEYEQLDKDMEMYKLAFAIRDAQAERKKRGGKKGESEYVFKSANDIIDYEENIKRLNKGEAIKYGSDSKKEVNAPSDLLKLIASHNNSLRKE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0020 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0022 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 177011 177367 . - . GCA_005502385.1_01125_mRNA GCA_005502385.1_01125 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKLKIYDLKRIEMMTLTEFNYRMWAYEYEQLDKDMEMYKLAFAIRDAQAERKKRGGKKGESEYVFKSANDIIDYEENIKRLNKGEAIKYGSDSKKEVNAPSDLLKLIASHNNSLRKE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0020 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0022 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 177011 177367 . - 0 GCA_005502385.1_01125 GCA_005502385.1_01125_gene,GCA_005502385.1_01125_mRNA GCA_005502385.1_01125 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKLKIYDLKRIEMMTLTEFNYRMWAYEYEQLDKDMEMYKLAFAIRDAQAERKKRGGKKGESEYVFKSANDIIDYEENIKRLNKGEAIKYGSDSKKEVNAPSDLLKLIASHNNSLRKE cloud 118 Phage protein WP_137689537.1 UPI0010F5CAE3 UniRef100_UPI0010F5CAE3,UniRef50_H9A0V9,UniRef90_A0A8X8GQX9 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0020 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0022 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 177409 177777 . - . GCA_005502385.1_01126_gene GCA_005502385.1_01126 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEITYNGRKLELSFGFKALNAIDRKLGVEAEQMKFGMGLQSTIPFVLQGNPITLGEYIIAMTSHHKKHPTENDILDVLDDIAENQGLVEFAEELVETLGKRPSTQSLVPDRFKPAKKDNKKK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0021 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0023 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 177409 177777 . - . GCA_005502385.1_01126_mRNA GCA_005502385.1_01126 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEITYNGRKLELSFGFKALNAIDRKLGVEAEQMKFGMGLQSTIPFVLQGNPITLGEYIIAMTSHHKKHPTENDILDVLDDIAENQGLVEFAEELVETLGKRPSTQSLVPDRFKPAKKDNKKK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0021 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0023 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 177409 177777 . - 0 GCA_005502385.1_01126 GCA_005502385.1_01126_gene,GCA_005502385.1_01126_mRNA GCA_005502385.1_01126 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEITYNGRKLELSFGFKALNAIDRKLGVEAEQMKFGMGLQSTIPFVLQGNPITLGEYIIAMTSHHKKHPTENDILDVLDDIAENQGLVEFAEELVETLGKRPSTQSLVPDRFKPAKKDNKKK cloud 122 Tail assembly chaperone WP_037570282.1 UPI0004A9AE68 UniRef100_UPI0004A9AE68,UniRef50_A0A8X8GRR4,UniRef90_A0A8X8GRR4 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0021 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0023 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 177843 178388 . - . GCA_005502385.1_01127_gene GCA_005502385.1_01127 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPTKQGTDELVLIRKVGDKKDANKVMLVTELERETEKDRDTEATFDGSVNSGGTLESTVTINCYMDQKDTLCDEIEDATEDDTPYELWVINKRVRNEDGKYKAEYRQGYWNSITRTNEADGIAEFETEFGVYLKKVRGYATLPPAIEENKAAYGFHDTVASDPADDGLADSIPQPTEVETV YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0022 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0024 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 177843 178388 . - . GCA_005502385.1_01127_mRNA GCA_005502385.1_01127 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPTKQGTDELVLIRKVGDKKDANKVMLVTELERETEKDRDTEATFDGSVNSGGTLESTVTINCYMDQKDTLCDEIEDATEDDTPYELWVINKRVRNEDGKYKAEYRQGYWNSITRTNEADGIAEFETEFGVYLKKVRGYATLPPAIEENKAAYGFHDTVASDPADDGLADSIPQPTEVETV YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0022 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0024 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 177843 178388 . - 0 GCA_005502385.1_01127 GCA_005502385.1_01127_gene,GCA_005502385.1_01127_mRNA GCA_005502385.1_01127 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPTKQGTDELVLIRKVGDKKDANKVMLVTELERETEKDRDTEATFDGSVNSGGTLESTVTINCYMDQKDTLCDEIEDATEDDTPYELWVINKRVRNEDGKYKAEYRQGYWNSITRTNEADGIAEFETEFGVYLKKVRGYATLPPAIEENKAAYGFHDTVASDPADDGLADSIPQPTEVETV cloud 181 phage major tail protein, TP901-1 family GO:0005198,GO:0019068,GO:0044423 WP_137689538.1 UPI0010F8D6BD UniRef100_UPI0010F8D6BD,UniRef50_A0A2J6P2H6,UniRef90_H9A0V7 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0022 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0024 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 178434 178823 . - . GCA_005502385.1_01128_gene GCA_005502385.1_01128 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKQSVNLQLFNYLYTRFEELDVPIIRTSELNQELPYPFIAIQSIRDDIHRLTFDTYSGSPTAIIHIWCTEEDKGKNDELYIQVQSILLDEIQLNGYTLTLPQISVNESTEQETNQTLSHTTISVEYASH YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0023 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0025 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 178434 178823 . - . GCA_005502385.1_01128_mRNA GCA_005502385.1_01128 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKQSVNLQLFNYLYTRFEELDVPIIRTSELNQELPYPFIAIQSIRDDIHRLTFDTYSGSPTAIIHIWCTEEDKGKNDELYIQVQSILLDEIQLNGYTLTLPQISVNESTEQETNQTLSHTTISVEYASH YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0023 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0025 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 178434 178823 . - 0 GCA_005502385.1_01128 GCA_005502385.1_01128_gene,GCA_005502385.1_01128_mRNA GCA_005502385.1_01128 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKQSVNLQLFNYLYTRFEELDVPIIRTSELNQELPYPFIAIQSIRDDIHRLTFDTYSGSPTAIIHIWCTEEDKGKNDELYIQVQSILLDEIQLNGYTLTLPQISVNESTEQETNQTLSHTTISVEYASH cloud 129 Capsid and scaffold protein UniRef50_A0A2A1KCD0,UniRef90_A0A1W6JNL2 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0023 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0025 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 178834 179190 . - . GCA_005502385.1_01129_gene GCA_005502385.1_01129 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRVGGGDLDDLIREFQNMHDNIDDDVDEVLHNNAIDFASDTILEAKEKMNAGYWTGNLARMVEDTKVGHLNYVITSKAGYSGFLEYGTRKMRPRTFMFPVYEKYTKQVRADLERLIED YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0024 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0026 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 178834 179190 . - . GCA_005502385.1_01129_mRNA GCA_005502385.1_01129 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRVGGGDLDDLIREFQNMHDNIDDDVDEVLHNNAIDFASDTILEAKEKMNAGYWTGNLARMVEDTKVGHLNYVITSKAGYSGFLEYGTRKMRPRTFMFPVYEKYTKQVRADLERLIED YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0024 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0026 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 178834 179190 . - 0 GCA_005502385.1_01129 GCA_005502385.1_01129_gene,GCA_005502385.1_01129_mRNA GCA_005502385.1_01129 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRVGGGDLDDLIREFQNMHDNIDDDVDEVLHNNAIDFASDTILEAKEKMNAGYWTGNLARMVEDTKVGHLNYVITSKAGYSGFLEYGTRKMRPRTFMFPVYEKYTKQVRADLERLIED cloud 118 HK97-gp10 family putative phage morphogenesis protein WP_137689540.1 UPI0010F5A7B6 UniRef100_UPI0010F5A7B6,UniRef50_A0A2J6P2C9,UniRef90_UPI0025561FE0 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0024 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0026 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 179190 179492 . - . GCA_005502385.1_01130_gene GCA_005502385.1_01130 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRYNKRVVFAKETKGKYNPKTSKTETYEKRYDAIPCNISPLSPQKTVVQYGDINKDINIIRLNGRFEPAVTHAYINDTKYQITKRIDYEHDTVFYIEEVK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0025 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0027 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 179190 179492 . - . GCA_005502385.1_01130_mRNA GCA_005502385.1_01130 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRYNKRVVFAKETKGKYNPKTSKTETYEKRYDAIPCNISPLSPQKTVVQYGDINKDINIIRLNGRFEPAVTHAYINDTKYQITKRIDYEHDTVFYIEEVK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0025 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0027 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 179190 179492 . - 0 GCA_005502385.1_01130 GCA_005502385.1_01130_gene,GCA_005502385.1_01130_mRNA GCA_005502385.1_01130 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRYNKRVVFAKETKGKYNPKTSKTETYEKRYDAIPCNISPLSPQKTVVQYGDINKDINIIRLNGRFEPAVTHAYINDTKYQITKRIDYEHDTVFYIEEVK cloud 100 Minor head protein UniRef50_A0A9Q4D5J6,UniRef90_A0A8X8KJP4 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0025 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0027 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 179489 179818 . - . GCA_005502385.1_01131_gene GCA_005502385.1_01131 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MATLENVKLLLSINDNVQDELLKRIIDNTEKRLISLLPVDIEEVPDRLEYVVEEVAVKRFNRVGAEGMTQESVDGRSNTFQANDFDEYMDVIDQYTPRTTGKRGTGIFY YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0026 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0028 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 179489 179818 . - . GCA_005502385.1_01131_mRNA GCA_005502385.1_01131 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MATLENVKLLLSINDNVQDELLKRIIDNTEKRLISLLPVDIEEVPDRLEYVVEEVAVKRFNRVGAEGMTQESVDGRSNTFQANDFDEYMDVIDQYTPRTTGKRGTGIFY YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0026 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0028 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 179489 179818 . - 0 GCA_005502385.1_01131 GCA_005502385.1_01131_gene,GCA_005502385.1_01131_mRNA GCA_005502385.1_01131 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MATLENVKLLLSINDNVQDELLKRIIDNTEKRLISLLPVDIEEVPDRLEYVVEEVAVKRFNRVGAEGMTQESVDGRSNTFQANDFDEYMDVIDQYTPRTTGKRGTGIFY cloud 109 Head-tail connector protein WP_137689541.1 UPI0010F5FFC9 UniRef100_UPI0010F5FFC9,UniRef50_A0A1W6JNR3,UniRef90_A0A1W6JNH7 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0026 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0028 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 179820 180089 . - . GCA_005502385.1_01132_gene GCA_005502385.1_01132 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTYSYEVVRPFVDAEDNKPYEVGDIYPTDITDERITQLLHADNKYNKQYIKLVVDSKNTKAELIEIARKHGIDVSENDTKADILDTLEG YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0027 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0029 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 179820 180089 . - . GCA_005502385.1_01132_mRNA GCA_005502385.1_01132 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTYSYEVVRPFVDAEDNKPYEVGDIYPTDITDERITQLLHADNKYNKQYIKLVVDSKNTKAELIEIARKHGIDVSENDTKADILDTLEG YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0027 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0029 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 179820 180089 . - 0 GCA_005502385.1_01132 GCA_005502385.1_01132_gene,GCA_005502385.1_01132_mRNA GCA_005502385.1_01132 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTYSYEVVRPFVDAEDNKPYEVGDIYPTDITDERITQLLHADNKYNKQYIKLVVDSKNTKAELIEIARKHGIDVSENDTKADILDTLEG cloud 89 Arc-like repressor UniRef50_H9A0V2,UniRef90_UPI0022E1D65A YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0027 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0029 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 180112 181023 . - . GCA_005502385.1_01133_gene GCA_005502385.1_01133 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MADVKRQDFNPDNVMMHEMKDGTLLNDFNEPIMLEVLQNSKVMQLGRVQDMGGKSEKTFTYWADKPGAYWVGEGRKIQTSKPTVVQATMRSHKLGVIVLATREYLNYTYSQFFEKMKPQIAEAFYNKIDEACVLNVDNPFTQSIEQSVATADNVVNGPITLENVLALEDELLEHDVEANAFISKNQNKTALRNVIDEKTQERYYDKSNSTLDGIPVVDLKSNEIKKGDLYAGDFNKMFYGVPYNMSYKISEEGQISTLTNADGTPVNLFEQEMIALRVTMDFSFHVADDNAFAKLTEGVAETV YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0028 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0030 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 180112 181023 . - . GCA_005502385.1_01133_mRNA GCA_005502385.1_01133 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MADVKRQDFNPDNVMMHEMKDGTLLNDFNEPIMLEVLQNSKVMQLGRVQDMGGKSEKTFTYWADKPGAYWVGEGRKIQTSKPTVVQATMRSHKLGVIVLATREYLNYTYSQFFEKMKPQIAEAFYNKIDEACVLNVDNPFTQSIEQSVATADNVVNGPITLENVLALEDELLEHDVEANAFISKNQNKTALRNVIDEKTQERYYDKSNSTLDGIPVVDLKSNEIKKGDLYAGDFNKMFYGVPYNMSYKISEEGQISTLTNADGTPVNLFEQEMIALRVTMDFSFHVADDNAFAKLTEGVAETV YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0028 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0030 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 180112 181023 . - 0 GCA_005502385.1_01133 GCA_005502385.1_01133_gene,GCA_005502385.1_01133_mRNA GCA_005502385.1_01133 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MADVKRQDFNPDNVMMHEMKDGTLLNDFNEPIMLEVLQNSKVMQLGRVQDMGGKSEKTFTYWADKPGAYWVGEGRKIQTSKPTVVQATMRSHKLGVIVLATREYLNYTYSQFFEKMKPQIAEAFYNKIDEACVLNVDNPFTQSIEQSVATADNVVNGPITLENVLALEDELLEHDVEANAFISKNQNKTALRNVIDEKTQERYYDKSNSTLDGIPVVDLKSNEIKKGDLYAGDFNKMFYGVPYNMSYKISEEGQISTLTNADGTPVNLFEQEMIALRVTMDFSFHVADDNAFAKLTEGVAETV cloud 303 phage major capsid protein GO:0005198,GO:0019068,GO:0044423 UniRef50_H9A0V1,UniRef90_UPI001E5976B6 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0028 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0030 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 181039 181650 . - . GCA_005502385.1_01134_gene GCA_005502385.1_01134 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNEIKRLKLNLQHFAEGDDIKKQEPDDKKDDKQKSGDKEVFEITQNELDSQKHKAVNKALANQEKKFEQRLKEAVENARSEGESYAKLTQKEKEEKALSEREKAIAEREKAQTLRELESDVIADLKEQKLPTSFAKALIKIEDNEEIKSTINEIKSDFDNAVQEQVKEATRQSTPSNQSSSFGNRQASGKSFEQLANENRIIK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0029 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0031 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 181039 181650 . - . GCA_005502385.1_01134_mRNA GCA_005502385.1_01134 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNEIKRLKLNLQHFAEGDDIKKQEPDDKKDDKQKSGDKEVFEITQNELDSQKHKAVNKALANQEKKFEQRLKEAVENARSEGESYAKLTQKEKEEKALSEREKAIAEREKAQTLRELESDVIADLKEQKLPTSFAKALIKIEDNEEIKSTINEIKSDFDNAVQEQVKEATRQSTPSNQSSSFGNRQASGKSFEQLANENRIIK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0029 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0031 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 181039 181650 . - 0 GCA_005502385.1_01134 GCA_005502385.1_01134_gene,GCA_005502385.1_01134_mRNA GCA_005502385.1_01134 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNEIKRLKLNLQHFAEGDDIKKQEPDDKKDDKQKSGDKEVFEITQNELDSQKHKAVNKALANQEKKFEQRLKEAVENARSEGESYAKLTQKEKEEKALSEREKAIAEREKAQTLRELESDVIADLKEQKLPTSFAKALIKIEDNEEIKSTINEIKSDFDNAVQEQVKEATRQSTPSNQSSSFGNRQASGKSFEQLANENRIIK cloud 203 DUF4355 domain-containing protein UniRef50_A0A2A1KAE6,UniRef90_UPI0011A69408 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0029 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0031 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 181820 181969 . - . GCA_005502385.1_01135_gene GCA_005502385.1_01135 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNEFQTALIDVLKDIHHELKRLNDTNPSNQAQAKPKKDKKKSFEPKNFI YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0030 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0032 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 181820 181969 . - . GCA_005502385.1_01135_mRNA GCA_005502385.1_01135 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNEFQTALIDVLKDIHHELKRLNDTNPSNQAQAKPKKDKKKSFEPKNFI YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0030 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0032 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 181820 181969 . - 0 GCA_005502385.1_01135 GCA_005502385.1_01135_gene,GCA_005502385.1_01135_mRNA GCA_005502385.1_01135 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNEFQTALIDVLKDIHHELKRLNDTNPSNQAQAKPKKDKKKSFEPKNFI cloud 49 hypothetical protein UniRef50_H9A0U9,UniRef90_A0A2H4J060 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0030 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0032 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 181962 182114 . - . GCA_005502385.1_01136_gene GCA_005502385.1_01136 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDYSKRLDDVMDEYLQVFAKDPNDILTDDMTDYDKIKKLEQAIQSGASDE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0031 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0033 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 181962 182114 . - . GCA_005502385.1_01136_mRNA GCA_005502385.1_01136 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDYSKRLDDVMDEYLQVFAKDPNDILTDDMTDYDKIKKLEQAIQSGASDE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0031 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0033 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 181962 182114 . - 0 GCA_005502385.1_01136 GCA_005502385.1_01136_gene,GCA_005502385.1_01136_mRNA GCA_005502385.1_01136 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDYSKRLDDVMDEYLQVFAKDPNDILTDDMTDYDKIKKLEQAIQSGASDE cloud 50 hypothetical protein WP_170999970.1 UPI0002534CA7 UniRef100_H9A0U8,UniRef50_H9A0U8,UniRef90_H9A0U8 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0031 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0033 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 182125 182298 . - . GCA_005502385.1_01137_gene GCA_005502385.1_01137 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTEQEKYLKEIATELKLIREQLEKSNNTIEIRSEIDTDSLQEIVNRENLKGSRTFNF YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0032 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0034 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 182125 182298 . - . GCA_005502385.1_01137_mRNA GCA_005502385.1_01137 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTEQEKYLKEIATELKLIREQLEKSNNTIEIRSEIDTDSLQEIVNRENLKGSRTFNF YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0032 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0034 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 182125 182298 . - 0 GCA_005502385.1_01137 GCA_005502385.1_01137_gene,GCA_005502385.1_01137_mRNA GCA_005502385.1_01137 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTEQEKYLKEIATELKLIREQLEKSNNTIEIRSEIDTDSLQEIVNRENLKGSRTFNF cloud 57 hypothetical protein WP_002500222.1 UPI00026C1F25 UniRef100_UPI00026C1F25,UniRef50_A0A8X8GTC3,UniRef90_A0A8X8GTC3 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0032 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0034 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 182303 183295 . - . GCA_005502385.1_01138_gene GCA_005502385.1_01138 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSYWEDRAKEIIDEESKSDYEIAQEIQRIVDEMNEDIEDEINRFYARYAIKEGISFIEAKKKIDAVDVQMFQQKAKQYVENKDFSDKANAELRAYNTKMYVSREKLLQAQLGLIVTYAYAQIEQSMYNYMESAYYRALEQQAGILGETLQVSINDVKTIIFTPFEGHKWSTRLWSDMDVVRRHVQKTTRHVLLRGRHPYEFVKDLRKDTGATTYNMKRLLLTETARVQMEASKRHMLDQHGEDAEYEYVTAQEVLHQRDKDGNIKKTIKVCKVCQALNEKVFKVKDMKPGINAAPMHPNCRCTVIPHKKDWRDKFFEERKGKYNLSKFTE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0033 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0035 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 182303 183295 . - . GCA_005502385.1_01138_mRNA GCA_005502385.1_01138 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSYWEDRAKEIIDEESKSDYEIAQEIQRIVDEMNEDIEDEINRFYARYAIKEGISFIEAKKKIDAVDVQMFQQKAKQYVENKDFSDKANAELRAYNTKMYVSREKLLQAQLGLIVTYAYAQIEQSMYNYMESAYYRALEQQAGILGETLQVSINDVKTIIFTPFEGHKWSTRLWSDMDVVRRHVQKTTRHVLLRGRHPYEFVKDLRKDTGATTYNMKRLLLTETARVQMEASKRHMLDQHGEDAEYEYVTAQEVLHQRDKDGNIKKTIKVCKVCQALNEKVFKVKDMKPGINAAPMHPNCRCTVIPHKKDWRDKFFEERKGKYNLSKFTE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0033 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0035 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 182303 183295 . - 0 GCA_005502385.1_01138 GCA_005502385.1_01138_gene,GCA_005502385.1_01138_mRNA GCA_005502385.1_01138 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSYWEDRAKEIIDEESKSDYEIAQEIQRIVDEMNEDIEDEINRFYARYAIKEGISFIEAKKKIDAVDVQMFQQKAKQYVENKDFSDKANAELRAYNTKMYVSREKLLQAQLGLIVTYAYAQIEQSMYNYMESAYYRALEQQAGILGETLQVSINDVKTIIFTPFEGHKWSTRLWSDMDVVRRHVQKTTRHVLLRGRHPYEFVKDLRKDTGATTYNMKRLLLTETARVQMEASKRHMLDQHGEDAEYEYVTAQEVLHQRDKDGNIKKTIKVCKVCQALNEKVFKVKDMKPGINAAPMHPNCRCTVIPHKKDWRDKFFEERKGKYNLSKFTE cloud 330 minor capsid protein UniRef50_A0A7T1B014,UniRef90_UPI001F584E9C YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0033 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0035 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 183302 184795 . - . GCA_005502385.1_01139_gene GCA_005502385.1_01139 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLKVNEFERDAEYRQHRDKIYRRDAVETYRYDGTLSEILGDYDFISECIKHHLEAQVPRLQMLDDYYQGLNYNIMRNRRRRERHLADNRAAHDFASYIADFINGYCFGHAIQVQTEDEDTQEKINGLHNLNDIDTHNRSIGLDLSIFGRAYEYIIRNQDDEVRLYKSDPRHTFVIYDNTIEQNSLIAVRYWQTSTREYDDTDIYNVDIITPNATNFFYANKSTNLSLQERRPPEPHSFGKVTITEFSNNEKRRGDFEKVIPLIDLYDNAQSDTANYMSDLNDAMLFIKGNIDFQGMSVEEQKKANVIHLSPEVYRDNEEKATEGNVDAKYIYKEYDVNGVEAYKDRISRNIHMFTNTPDMTDENFGGNQSGEAMKYKLFGLEQRTAIKEGLFRKGLRRRYKLIGQIMSINRELNKDAIQDLTFTFTRNIPKSIKDEMDMYLQAGGQVSQQTLMSIVSFIDNPQQEMERIENEEDAQLQKSDERMYRQGIDNQTDIKE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0034 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0036 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 183302 184795 . - . GCA_005502385.1_01139_mRNA GCA_005502385.1_01139 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLKVNEFERDAEYRQHRDKIYRRDAVETYRYDGTLSEILGDYDFISECIKHHLEAQVPRLQMLDDYYQGLNYNIMRNRRRRERHLADNRAAHDFASYIADFINGYCFGHAIQVQTEDEDTQEKINGLHNLNDIDTHNRSIGLDLSIFGRAYEYIIRNQDDEVRLYKSDPRHTFVIYDNTIEQNSLIAVRYWQTSTREYDDTDIYNVDIITPNATNFFYANKSTNLSLQERRPPEPHSFGKVTITEFSNNEKRRGDFEKVIPLIDLYDNAQSDTANYMSDLNDAMLFIKGNIDFQGMSVEEQKKANVIHLSPEVYRDNEEKATEGNVDAKYIYKEYDVNGVEAYKDRISRNIHMFTNTPDMTDENFGGNQSGEAMKYKLFGLEQRTAIKEGLFRKGLRRRYKLIGQIMSINRELNKDAIQDLTFTFTRNIPKSIKDEMDMYLQAGGQVSQQTLMSIVSFIDNPQQEMERIENEEDAQLQKSDERMYRQGIDNQTDIKE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0034 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0036 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 183302 184795 . - 0 GCA_005502385.1_01139 GCA_005502385.1_01139_gene,GCA_005502385.1_01139_mRNA GCA_005502385.1_01139 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLKVNEFERDAEYRQHRDKIYRRDAVETYRYDGTLSEILGDYDFISECIKHHLEAQVPRLQMLDDYYQGLNYNIMRNRRRRERHLADNRAAHDFASYIADFINGYCFGHAIQVQTEDEDTQEKINGLHNLNDIDTHNRSIGLDLSIFGRAYEYIIRNQDDEVRLYKSDPRHTFVIYDNTIEQNSLIAVRYWQTSTREYDDTDIYNVDIITPNATNFFYANKSTNLSLQERRPPEPHSFGKVTITEFSNNEKRRGDFEKVIPLIDLYDNAQSDTANYMSDLNDAMLFIKGNIDFQGMSVEEQKKANVIHLSPEVYRDNEEKATEGNVDAKYIYKEYDVNGVEAYKDRISRNIHMFTNTPDMTDENFGGNQSGEAMKYKLFGLEQRTAIKEGLFRKGLRRRYKLIGQIMSINRELNKDAIQDLTFTFTRNIPKSIKDEMDMYLQAGGQVSQQTLMSIVSFIDNPQQEMERIENEEDAQLQKSDERMYRQGIDNQTDIKE cloud 497 phage portal protein GO:0005198,GO:0046798,GO:0051027 UniRef50_A0A0H3JQN8,UniRef90_A0A2A1K8V7 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0034 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0036 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 184809 186089 . - . GCA_005502385.1_01140_gene GCA_005502385.1_01140 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTNLKLNFNHPEKVFNKNIFEILTNYENFTEVHYGGGSSGKSHGVIQKVVLKALMKWPIPRRMLWLRKVQSTIKDSLFEDVKSCLIDYGIWDMCQWNKTDNKVVLPNGATFLFKGLDNPEKIKSIKGISDIVMEEASEFTLNDYTQLTLRLREKKHMNKQIFLMFNPVSKLNWVYKYFFEHGEDMEGVMIRQSSYKDNKFLDKITRENLELLAKRNPAYYKIYALGQFATLDKLVFPKYEKRLLNKDELRHLPSYFGLDFGYVNDPSAFVHVKIDKENKKLYIIEEYVKTGMLNDEIAKTIKQLGYVKEEITADSSEQKSIQEIKKLGIERIKPTRKGKGSVVQGLQFLMQFDIIIDERCFKTIEEFDNYTWQKDKNTDEYLNEPVDTYNHCIDALRYSVERFYKPQTNKRSNIRKSISAIKSMGL YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0035 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0037 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 184809 186089 . - . GCA_005502385.1_01140_mRNA GCA_005502385.1_01140 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTNLKLNFNHPEKVFNKNIFEILTNYENFTEVHYGGGSSGKSHGVIQKVVLKALMKWPIPRRMLWLRKVQSTIKDSLFEDVKSCLIDYGIWDMCQWNKTDNKVVLPNGATFLFKGLDNPEKIKSIKGISDIVMEEASEFTLNDYTQLTLRLREKKHMNKQIFLMFNPVSKLNWVYKYFFEHGEDMEGVMIRQSSYKDNKFLDKITRENLELLAKRNPAYYKIYALGQFATLDKLVFPKYEKRLLNKDELRHLPSYFGLDFGYVNDPSAFVHVKIDKENKKLYIIEEYVKTGMLNDEIAKTIKQLGYVKEEITADSSEQKSIQEIKKLGIERIKPTRKGKGSVVQGLQFLMQFDIIIDERCFKTIEEFDNYTWQKDKNTDEYLNEPVDTYNHCIDALRYSVERFYKPQTNKRSNIRKSISAIKSMGL YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0035 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0037 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 184809 186089 . - 0 GCA_005502385.1_01140 GCA_005502385.1_01140_gene,GCA_005502385.1_01140_mRNA GCA_005502385.1_01140 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTNLKLNFNHPEKVFNKNIFEILTNYENFTEVHYGGGSSGKSHGVIQKVVLKALMKWPIPRRMLWLRKVQSTIKDSLFEDVKSCLIDYGIWDMCQWNKTDNKVVLPNGATFLFKGLDNPEKIKSIKGISDIVMEEASEFTLNDYTQLTLRLREKKHMNKQIFLMFNPVSKLNWVYKYFFEHGEDMEGVMIRQSSYKDNKFLDKITRENLELLAKRNPAYYKIYALGQFATLDKLVFPKYEKRLLNKDELRHLPSYFGLDFGYVNDPSAFVHVKIDKENKKLYIIEEYVKTGMLNDEIAKTIKQLGYVKEEITADSSEQKSIQEIKKLGIERIKPTRKGKGSVVQGLQFLMQFDIIIDERCFKTIEEFDNYTWQKDKNTDEYLNEPVDTYNHCIDALRYSVERFYKPQTNKRSNIRKSISAIKSMGL cloud 426 PBSX family phage terminase large subunit UniRef50_A0A831E983,UniRef90_A0A2A1K9I0 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0035 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0037 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 186076 186534 . - . GCA_005502385.1_01141_gene GCA_005502385.1_01141 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MIYEMNGLNIKQQRFADEYIKSGNATDAYIKAGYSKNKANTNATKLLQNTTIKNYINERIKEVQEESLMSITEALALSASIARGEPQKAYTKRYDHLEGEVDKEVTYTITPNVEERQRSLDHILKVHGAYIDKKEITQKNIEINIGDYNDEP YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0036 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0038 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 186076 186534 . - . GCA_005502385.1_01141_mRNA GCA_005502385.1_01141 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MIYEMNGLNIKQQRFADEYIKSGNATDAYIKAGYSKNKANTNATKLLQNTTIKNYINERIKEVQEESLMSITEALALSASIARGEPQKAYTKRYDHLEGEVDKEVTYTITPNVEERQRSLDHILKVHGAYIDKKEITQKNIEINIGDYNDEP YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0036 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0038 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 186076 186534 . - 0 GCA_005502385.1_01141 GCA_005502385.1_01141_gene,GCA_005502385.1_01141_mRNA GCA_005502385.1_01141 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MIYEMNGLNIKQQRFADEYIKSGNATDAYIKAGYSKNKANTNATKLLQNTTIKNYINERIKEVQEESLMSITEALALSASIARGEPQKAYTKRYDHLEGEVDKEVTYTITPNVEERQRSLDHILKVHGAYIDKKEITQKNIEINIGDYNDEP cloud 152 Terminase small subunit UniRef50_A4ZFA6,UniRef90_A0A2A1K9S1 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0036 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0038 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 186554 186934 . - . GCA_005502385.1_01142_gene GCA_005502385.1_01142 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEIKKRKNLKIHRLVALNFIDNPLSKPFVNHIDGDKLNNDIRNLEWCTPLENTTHAIENGLFVPKVHCVKEGKTIGMFDKDDNLLKTFSRSKEAAEYVGTDHKTIIKVCNGYKSYKTAKGYKWKYI YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0037 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0039 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 186554 186934 . - . GCA_005502385.1_01142_mRNA GCA_005502385.1_01142 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEIKKRKNLKIHRLVALNFIDNPLSKPFVNHIDGDKLNNDIRNLEWCTPLENTTHAIENGLFVPKVHCVKEGKTIGMFDKDDNLLKTFSRSKEAAEYVGTDHKTIIKVCNGYKSYKTAKGYKWKYI YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0037 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0039 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 186554 186934 . - 0 GCA_005502385.1_01142 GCA_005502385.1_01142_gene,GCA_005502385.1_01142_mRNA GCA_005502385.1_01142 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEIKKRKNLKIHRLVALNFIDNPLSKPFVNHIDGDKLNNDIRNLEWCTPLENTTHAIENGLFVPKVHCVKEGKTIGMFDKDDNLLKTFSRSKEAAEYVGTDHKTIIKVCNGYKSYKTAKGYKWKYI cloud 126 hypothetical protein YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0037 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0039 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 186897 187127 . - . GCA_005502385.1_01143_gene GCA_005502385.1_01143 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNYSKINEIWKPIKGYEDFYEISSFGRIRSLDRLTNNSYGTFIRKGKLLKTSIDRNGYKYVLLSDGNKKKKESKNS YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0038 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0040 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 186897 187127 . - . GCA_005502385.1_01143_mRNA GCA_005502385.1_01143 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNYSKINEIWKPIKGYEDFYEISSFGRIRSLDRLTNNSYGTFIRKGKLLKTSIDRNGYKYVLLSDGNKKKKESKNS YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0038 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0040 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 186897 187127 . - 0 GCA_005502385.1_01143 GCA_005502385.1_01143_gene,GCA_005502385.1_01143_mRNA GCA_005502385.1_01143 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNYSKINEIWKPIKGYEDFYEISSFGRIRSLDRLTNNSYGTFIRKGKLLKTSIDRNGYKYVLLSDGNKKKKESKNS cloud 76 hypothetical protein YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0038 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0040 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 187383 187784 . - . GCA_005502385.1_01144_gene GCA_005502385.1_01144 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MYSKEAILNMIDNYQMTCKYLITVIPDCDSNSIAQYGIQATLPKPQGQNSSKVEDTVIRRERMSKRHAQMLAEVEFINQSQQKLGHVDFIFLDHLKKAKRRDEIIKVMPNSRLNRNNFLARKDELAEKIYLLQ YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0039 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0041 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 187383 187784 . - . GCA_005502385.1_01144_mRNA GCA_005502385.1_01144 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MYSKEAILNMIDNYQMTCKYLITVIPDCDSNSIAQYGIQATLPKPQGQNSSKVEDTVIRRERMSKRHAQMLAEVEFINQSQQKLGHVDFIFLDHLKKAKRRDEIIKVMPNSRLNRNNFLARKDELAEKIYLLQ YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0039 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0041 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 187383 187784 . - 0 GCA_005502385.1_01144 GCA_005502385.1_01144_gene,GCA_005502385.1_01144_mRNA GCA_005502385.1_01144 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MYSKEAILNMIDNYQMTCKYLITVIPDCDSNSIAQYGIQATLPKPQGQNSSKVEDTVIRRERMSKRHAQMLAEVEFINQSQQKLGHVDFIFLDHLKKAKRRDEIIKVMPNSRLNRNNFLARKDELAEKIYLLQ cloud 133 Phi PVL-like protein WP_137689550.1 UPI0010F8F827 UniRef100_UPI0010F8F827,UniRef50_A0A0E3XBL2,UniRef90_H9A0U2 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0039 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0041 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 187797 187940 . - . GCA_005502385.1_01145_gene GCA_005502385.1_01145 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MWLIILCVFLTILTFGFAIENAKLRGNMEGKEYQIKLLEHRLSKYED YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0040 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0042 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 187797 187940 . - . GCA_005502385.1_01145_mRNA GCA_005502385.1_01145 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MWLIILCVFLTILTFGFAIENAKLRGNMEGKEYQIKLLEHRLSKYED YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0040 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0042 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 187797 187940 . - 0 GCA_005502385.1_01145 GCA_005502385.1_01145_gene,GCA_005502385.1_01145_mRNA GCA_005502385.1_01145 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MWLIILCVFLTILTFGFAIENAKLRGNMEGKEYQIKLLEHRLSKYED cloud 47 hypothetical protein YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0040 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0042 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 188014 188181 . - . GCA_005502385.1_01146_gene GCA_005502385.1_01146 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVKKLVKLITLASISVLGIYLKRYMIVILESEDDIDAPADYALNGDQSDLNKVIP YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0041 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0043 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 188014 188181 . - . GCA_005502385.1_01146_mRNA GCA_005502385.1_01146 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVKKLVKLITLASISVLGIYLKRYMIVILESEDDIDAPADYALNGDQSDLNKVIP YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0041 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0043 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 188014 188181 . - 0 GCA_005502385.1_01146 GCA_005502385.1_01146_gene,GCA_005502385.1_01146_mRNA GCA_005502385.1_01146 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVKKLVKLITLASISVLGIYLKRYMIVILESEDDIDAPADYALNGDQSDLNKVIP cloud 55 rinB transcriptional activator RinB UniRef50_UPI0014766DBF YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0041 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0043 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 188187 188384 . - . GCA_005502385.1_01147_gene GCA_005502385.1_01147 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTDLFIIVFALTLLVTIIGMIVKMYLENTKQERQYKKIAKKTRNKRKEFEERKRKQFENNKLDKE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0042 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0044 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 188187 188384 . - . GCA_005502385.1_01147_mRNA GCA_005502385.1_01147 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTDLFIIVFALTLLVTIIGMIVKMYLENTKQERQYKKIAKKTRNKRKEFEERKRKQFENNKLDKE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0042 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0044 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 188187 188384 . - 0 GCA_005502385.1_01147 GCA_005502385.1_01147_gene,GCA_005502385.1_01147_mRNA GCA_005502385.1_01147 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTDLFIIVFALTLLVTIIGMIVKMYLENTKQERQYKKIAKKTRNKRKEFEERKRKQFENNKLDKE cloud 65 Phage protein UniRef50_A0A1E9A1Q3,UniRef90_UPI0014752B66 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0042 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0044 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 188390 188659 . - . GCA_005502385.1_01148_gene GCA_005502385.1_01148 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKLNLGLTILIWIVVTYLVLISLAYVVAFVGTIVLAIKDKKDRKEFREKRNREWIEKEKEFENRMKERREEFYKRNKHIIKDLDKHFKE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0043 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0045 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 188390 188659 . - . GCA_005502385.1_01148_mRNA GCA_005502385.1_01148 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKLNLGLTILIWIVVTYLVLISLAYVVAFVGTIVLAIKDKKDRKEFREKRNREWIEKEKEFENRMKERREEFYKRNKHIIKDLDKHFKE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0043 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0045 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 188390 188659 . - 0 GCA_005502385.1_01148 GCA_005502385.1_01148_gene,GCA_005502385.1_01148_mRNA GCA_005502385.1_01148 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKLNLGLTILIWIVVTYLVLISLAYVVAFVGTIVLAIKDKKDRKEFREKRNREWIEKEKEFENRMKERREEFYKRNKHIIKDLDKHFKE cloud 89 hypothetical protein UniRef50_A0A943LDA8,UniRef90_UPI0014733E48 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0043 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0045 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 188672 188845 . - . GCA_005502385.1_01149_gene GCA_005502385.1_01149 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRERTKIIFRGWNEEIFILQGKNLDITGLNQISNEIKRLYENYKVVVIPIEVDFEFK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0044 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0046 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 188672 188845 . - . GCA_005502385.1_01149_mRNA GCA_005502385.1_01149 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRERTKIIFRGWNEEIFILQGKNLDITGLNQISNEIKRLYENYKVVVIPIEVDFEFK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0044 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0046 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 188672 188845 . - 0 GCA_005502385.1_01149 GCA_005502385.1_01149_gene,GCA_005502385.1_01149_mRNA GCA_005502385.1_01149 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRERTKIIFRGWNEEIFILQGKNLDITGLNQISNEIKRLYENYKVVVIPIEVDFEFK cloud 57 hypothetical protein WP_107643065.1 UPI000D1FC674 UniRef100_UPI000D1FC674,UniRef50_A0A0E3XD78,UniRef90_UPI000D1DFE24 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0044 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0046 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 188885 189430 . - . GCA_005502385.1_01150_gene GCA_005502385.1_01150 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNNTLTVEQLKELLQIQKEFDNRIPTLNLQDSKIAYVVEFFEWFNTLETFKNWKKKPGKPLDVQLDELADMLAFGLSITHQLNLDVTEETVENLNNIMQAAKDIDKHLDDIDILSEVYTNLGKNIFNRDSTNSDALTFLTYPFAFSVEYYSLDQLIDAYNKKMEVNHARQDGTADKDKGYV YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0045 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0047 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 188885 189430 . - . GCA_005502385.1_01150_mRNA GCA_005502385.1_01150 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNNTLTVEQLKELLQIQKEFDNRIPTLNLQDSKIAYVVEFFEWFNTLETFKNWKKKPGKPLDVQLDELADMLAFGLSITHQLNLDVTEETVENLNNIMQAAKDIDKHLDDIDILSEVYTNLGKNIFNRDSTNSDALTFLTYPFAFSVEYYSLDQLIDAYNKKMEVNHARQDGTADKDKGYV YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0045 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0047 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 188885 189430 . - 0 GCA_005502385.1_01150 GCA_005502385.1_01150_gene,GCA_005502385.1_01150_mRNA GCA_005502385.1_01150 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNNTLTVEQLKELLQIQKEFDNRIPTLNLQDSKIAYVVEFFEWFNTLETFKNWKKKPGKPLDVQLDELADMLAFGLSITHQLNLDVTEETVENLNNIMQAAKDIDKHLDDIDILSEVYTNLGKNIFNRDSTNSDALTFLTYPFAFSVEYYSLDQLIDAYNKKMEVNHARQDGTADKDKGYV cloud 181 dUTPase UniRef50_A0A7U7JTE6,UniRef90_H9A0T6 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0045 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0047 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 189431 189676 . - . GCA_005502385.1_01151_gene GCA_005502385.1_01151 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSELDIVSDYFLDDTFEVTKESASNLVSELQSHKFTIESQQRKLNKLGLIKREHAKWLHGKITVVQFAYNVEEILNNLEDE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0046 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0048 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 189431 189676 . - . GCA_005502385.1_01151_mRNA GCA_005502385.1_01151 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSELDIVSDYFLDDTFEVTKESASNLVSELQSHKFTIESQQRKLNKLGLIKREHAKWLHGKITVVQFAYNVEEILNNLEDE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0046 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0048 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 189431 189676 . - 0 GCA_005502385.1_01151 GCA_005502385.1_01151_gene,GCA_005502385.1_01151_mRNA GCA_005502385.1_01151 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSELDIVSDYFLDDTFEVTKESASNLVSELQSHKFTIESQQRKLNKLGLIKREHAKWLHGKITVVQFAYNVEEILNNLEDE cloud 81 hypothetical protein UPI0002534C9A UniRef100_H9A0T5,UniRef50_H9A0T5,UniRef90_H9A0T5 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0046 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0048 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 189669 190079 . - . GCA_005502385.1_01152_gene GCA_005502385.1_01152 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAEPTLDELVAFMKKHGVEKVDSITDEKSAIKHFRAASRVYKEERDAYKKQRDELINDMAEVKRKAEAWDKLKEEKTKEYVLRHNQLKQTSILDPRELSIREMVWELKYDLQRMDELDGTNDFKNLLSDWERGSDE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0047 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0049 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 189669 190079 . - . GCA_005502385.1_01152_mRNA GCA_005502385.1_01152 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAEPTLDELVAFMKKHGVEKVDSITDEKSAIKHFRAASRVYKEERDAYKKQRDELINDMAEVKRKAEAWDKLKEEKTKEYVLRHNQLKQTSILDPRELSIREMVWELKYDLQRMDELDGTNDFKNLLSDWERGSDE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0047 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0049 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 189669 190079 . - 0 GCA_005502385.1_01152 GCA_005502385.1_01152_gene,GCA_005502385.1_01152_mRNA GCA_005502385.1_01152 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAEPTLDELVAFMKKHGVEKVDSITDEKSAIKHFRAASRVYKEERDAYKKQRDELINDMAEVKRKAEAWDKLKEEKTKEYVLRHNQLKQTSILDPRELSIREMVWELKYDLQRMDELDGTNDFKNLLSDWERGSDE cloud 136 hypothetical protein UniRef50_A0A2H4J4C2 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0047 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0049 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 190082 190426 . - . GCA_005502385.1_01153_gene GCA_005502385.1_01153 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDINNLYTYKATCTNVVDGDTLDILLDCGFDTYAKRRVRLLGVDTPERGQDKFKEATAFTRECVEHKDIYVQTYKSDVFGRYLANVWYEDGTRSLNDDLRDAGLLKENSKWNEG YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0048 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0050 shell . GCA_005502385.1|SCOV01000002.1 prokka mRNA 190082 190426 . - . GCA_005502385.1_01153_mRNA GCA_005502385.1_01153 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDINNLYTYKATCTNVVDGDTLDILLDCGFDTYAKRRVRLLGVDTPERGQDKFKEATAFTRECVEHKDIYVQTYKSDVFGRYLANVWYEDGTRSLNDDLRDAGLLKENSKWNEG YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0048 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0050 shell . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 190082 190426 . - 0 GCA_005502385.1_01153 GCA_005502385.1_01153_gene,GCA_005502385.1_01153_mRNA GCA_005502385.1_01153 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDINNLYTYKATCTNVVDGDTLDILLDCGFDTYAKRRVRLLGVDTPERGQDKFKEATAFTRECVEHKDIYVQTYKSDVFGRYLANVWYEDGTRSLNDDLRDAGLLKENSKWNEG shell 114 Nuclease UniRef50_A0A0M2NYY4,UniRef90_H9A0T3 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0048 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0050 shell FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 190416 190805 . - . GCA_005502385.1_01154_gene GCA_005502385.1_01154 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MIPKFRAWDKKDKAIRDVTHIIYMYESVVLNVERTFYERTFCEIELMQLTGLKDKNGTEIYEGDIVKYNSVPNPFLSDNYFKIIQARSGEWRIDNYIEGRVLIFNDHQVEVVGNIFENKELLEDKVNGH YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0049 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0051 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 190416 190805 . - . GCA_005502385.1_01154_mRNA GCA_005502385.1_01154 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MIPKFRAWDKKDKAIRDVTHIIYMYESVVLNVERTFYERTFCEIELMQLTGLKDKNGTEIYEGDIVKYNSVPNPFLSDNYFKIIQARSGEWRIDNYIEGRVLIFNDHQVEVVGNIFENKELLEDKVNGH YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0049 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0051 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 190416 190805 . - 0 GCA_005502385.1_01154 GCA_005502385.1_01154_gene,GCA_005502385.1_01154_mRNA GCA_005502385.1_01154 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MIPKFRAWDKKDKAIRDVTHIIYMYESVVLNVERTFYERTFCEIELMQLTGLKDKNGTEIYEGDIVKYNSVPNPFLSDNYFKIIQARSGEWRIDNYIEGRVLIFNDHQVEVVGNIFENKELLEDKVNGH cloud 129 yopX YopX protein domain-containing protein UniRef50_A0A6N0I1Q8 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0049 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0051 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 190802 190987 . - . GCA_005502385.1_01155_gene GCA_005502385.1_01155 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MILSNTINQRYRYATQGKTPTQIQHELRELGVKGFVVKVAESRVTMKVSECDIKRNRECLR YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0050 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0052 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 190802 190987 . - . GCA_005502385.1_01155_mRNA GCA_005502385.1_01155 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MILSNTINQRYRYATQGKTPTQIQHELRELGVKGFVVKVAESRVTMKVSECDIKRNRECLR YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0050 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0052 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 190802 190987 . - 0 GCA_005502385.1_01155 GCA_005502385.1_01155_gene,GCA_005502385.1_01155_mRNA GCA_005502385.1_01155 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MILSNTINQRYRYATQGKTPTQIQHELRELGVKGFVVKVAESRVTMKVSECDIKRNRECLR cloud 61 Phage protein UniRef50_A0A653ZDP6,UniRef90_H9A0T1 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0050 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0052 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 191042 191422 . - . GCA_005502385.1_01156_gene GCA_005502385.1_01156 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MMLSSAMQKLIKETVDEIYVAFDIPTHTPIDLDEFLNILDIQLREDSELIYKGKIEKEYNGKTIITIKRHHNEEKRRFAIAHELGHYFLHFNDEEKEFKDSVFYRNLEYNNEEIEANQFALNLLNK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0051 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0053 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 191042 191422 . - . GCA_005502385.1_01156_mRNA GCA_005502385.1_01156 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MMLSSAMQKLIKETVDEIYVAFDIPTHTPIDLDEFLNILDIQLREDSELIYKGKIEKEYNGKTIITIKRHHNEEKRRFAIAHELGHYFLHFNDEEKEFKDSVFYRNLEYNNEEIEANQFALNLLNK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0051 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0053 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 191042 191422 . - 0 GCA_005502385.1_01156 GCA_005502385.1_01156_gene,GCA_005502385.1_01156_mRNA GCA_005502385.1_01156 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MMLSSAMQKLIKETVDEIYVAFDIPTHTPIDLDEFLNILDIQLREDSELIYKGKIEKEYNGKTIITIKRHHNEEKRRFAIAHELGHYFLHFNDEEKEFKDSVFYRNLEYNNEEIEANQFALNLLNK cloud 126 ImmA/IrrE family metallo-endopeptidase UniRef50_UPI000E69F67E,UniRef90_UPI000E69F67E YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0051 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0053 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 191419 192099 . - . GCA_005502385.1_01157_gene GCA_005502385.1_01157 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVYMYEPFTHTVTETDLSHLHNVTGIPHNTLWYQSKNGIYNDKLKCFFSDTLPRFKKKQEFNEKVVEEDEIWKYSDKYDLYVSNLGRMKTPNGKYKFGNGCKGVITVIYKNSKYRAADIVYETFIKNLKTGHHAYPKDSQYNNIKADNLFSTTFKKYRLYRRNTGRSKPLYLVDSNNEIVEEFASTVEAQSVLFIDRRHVARRCNSRCVNDGLMYVWADEYEELNA YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0052 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0054 shell . GCA_005502385.1|SCOV01000002.1 prokka mRNA 191419 192099 . - . GCA_005502385.1_01157_mRNA GCA_005502385.1_01157 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVYMYEPFTHTVTETDLSHLHNVTGIPHNTLWYQSKNGIYNDKLKCFFSDTLPRFKKKQEFNEKVVEEDEIWKYSDKYDLYVSNLGRMKTPNGKYKFGNGCKGVITVIYKNSKYRAADIVYETFIKNLKTGHHAYPKDSQYNNIKADNLFSTTFKKYRLYRRNTGRSKPLYLVDSNNEIVEEFASTVEAQSVLFIDRRHVARRCNSRCVNDGLMYVWADEYEELNA YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0052 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0054 shell . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 191419 192099 . - 0 GCA_005502385.1_01157 GCA_005502385.1_01157_gene,GCA_005502385.1_01157_mRNA GCA_005502385.1_01157 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVYMYEPFTHTVTETDLSHLHNVTGIPHNTLWYQSKNGIYNDKLKCFFSDTLPRFKKKQEFNEKVVEEDEIWKYSDKYDLYVSNLGRMKTPNGKYKFGNGCKGVITVIYKNSKYRAADIVYETFIKNLKTGHHAYPKDSQYNNIKADNLFSTTFKKYRLYRRNTGRSKPLYLVDSNNEIVEEFASTVEAQSVLFIDRRHVARRCNSRCVNDGLMYVWADEYEELNA shell 226 HNH endonuclease UniRef50_A0A8X8K5T9,UniRef90_A0A6N0I1T5 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0052 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0054 shell FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 192102 192566 . - . GCA_005502385.1_01158_gene GCA_005502385.1_01158 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTTKILDACCGSKMFWFDKENQEVTFMDNRELDTTLSDGRKLIVTPDILADFRDMPFEDNSFYLVVFDPPHLKTGGDKSWLIQKYGRLNKNWPEDLKQGFNECMRVLKPNGTLIFKWNEEQIKLSEVLKCFSQQPLFGNKRAKTHWLVFMKLEG YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0053 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0055 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 192102 192566 . - . GCA_005502385.1_01158_mRNA GCA_005502385.1_01158 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTTKILDACCGSKMFWFDKENQEVTFMDNRELDTTLSDGRKLIVTPDILADFRDMPFEDNSFYLVVFDPPHLKTGGDKSWLIQKYGRLNKNWPEDLKQGFNECMRVLKPNGTLIFKWNEEQIKLSEVLKCFSQQPLFGNKRAKTHWLVFMKLEG YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0053 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0055 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 192102 192566 . - 0 GCA_005502385.1_01158 GCA_005502385.1_01158_gene,GCA_005502385.1_01158_mRNA GCA_005502385.1_01158 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTTKILDACCGSKMFWFDKENQEVTFMDNRELDTTLSDGRKLIVTPDILADFRDMPFEDNSFYLVVFDPPHLKTGGDKSWLIQKYGRLNKNWPEDLKQGFNECMRVLKPNGTLIFKWNEEQIKLSEVLKCFSQQPLFGNKRAKTHWLVFMKLEG cloud 154 methyltransferase domain-containing protein WP_137689560.1 UPI0010F5735E UniRef100_UPI0010F5735E,UniRef50_A0A1F8QCK8,UniRef90_UPI0010F5735E YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0053 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0055 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 192569 193018 . - . GCA_005502385.1_01159_gene GCA_005502385.1_01159 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRISDLKRNDVIRIFKSEKSISSLAIVEKTEGINEFNGIYFWAEVETEDGRTILIDDSWDFEKANEPFTRKVDMQEEQDMVHEPPHYQFGKFSARVIIELVGKTYKSASVFYHVGNALKYLMRAPRKNGLQDLKKAKQSVEFAIENWEG YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0054 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0056 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 192569 193018 . - . GCA_005502385.1_01159_mRNA GCA_005502385.1_01159 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRISDLKRNDVIRIFKSEKSISSLAIVEKTEGINEFNGIYFWAEVETEDGRTILIDDSWDFEKANEPFTRKVDMQEEQDMVHEPPHYQFGKFSARVIIELVGKTYKSASVFYHVGNALKYLMRAPRKNGLQDLKKAKQSVEFAIENWEG YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0054 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0056 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 192569 193018 . - 0 GCA_005502385.1_01159 GCA_005502385.1_01159_gene,GCA_005502385.1_01159_mRNA GCA_005502385.1_01159 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRISDLKRNDVIRIFKSEKSISSLAIVEKTEGINEFNGIYFWAEVETEDGRTILIDDSWDFEKANEPFTRKVDMQEEQDMVHEPPHYQFGKFSARVIIELVGKTYKSASVFYHVGNALKYLMRAPRKNGLQDLKKAKQSVEFAIENWEG cloud 149 DUF3310 domain-containing protein UniRef50_H9A0S8,UniRef90_UPI000ACDE2D6 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0054 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0056 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 193015 193218 . - . GCA_005502385.1_01160_gene GCA_005502385.1_01160 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MYDRYKNIPDVYIGGKKYRLCDVYKYFDVGDATVRKRYYKQKLRGWELVYGKGKVPVEIEQGKGIGR YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0055 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0057 shell . GCA_005502385.1|SCOV01000002.1 prokka mRNA 193015 193218 . - . GCA_005502385.1_01160_mRNA GCA_005502385.1_01160 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MYDRYKNIPDVYIGGKKYRLCDVYKYFDVGDATVRKRYYKQKLRGWELVYGKGKVPVEIEQGKGIGR YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0055 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0057 shell . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 193015 193218 . - 0 GCA_005502385.1_01160 GCA_005502385.1_01160_gene,GCA_005502385.1_01160_mRNA GCA_005502385.1_01160 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MYDRYKNIPDVYIGGKKYRLCDVYKYFDVGDATVRKRYYKQKLRGWELVYGKGKVPVEIEQGKGIGR shell 67 Transcriptional regulator WP_137689561.1 UPI0010F7432C UniRef100_UPI0010F7432C,UniRef50_H9A0S7,UniRef90_H9A0S7 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0055 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0057 shell FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 193223 193396 . - . GCA_005502385.1_01161_gene GCA_005502385.1_01161 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MATVKAEVVIRGTIELPAYEESDKEMEYTIEQAKKSPEEIFDDIDIKDVDFRYEHWK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0056 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0058 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 193223 193396 . - . GCA_005502385.1_01161_mRNA GCA_005502385.1_01161 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MATVKAEVVIRGTIELPAYEESDKEMEYTIEQAKKSPEEIFDDIDIKDVDFRYEHWK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0056 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0058 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 193223 193396 . - 0 GCA_005502385.1_01161 GCA_005502385.1_01161_gene,GCA_005502385.1_01161_mRNA GCA_005502385.1_01161 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MATVKAEVVIRGTIELPAYEESDKEMEYTIEQAKKSPEEIFDDIDIKDVDFRYEHWK cloud 57 hypothetical protein UniRef50_A0A8X8GUH5 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0056 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0058 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 193396 193755 . - . GCA_005502385.1_01162_gene GCA_005502385.1_01162 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDNIWKDFAKEYMPEDKFERVCEEIKNSKNVVDVNHEFSLNSFLSVIYSKEDRKVGMRITSGYQNAFDVCYKNEKPIINEKDFGKIDLIFDNKLSIENFIETAQLLLKAYDEITKESDE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0057 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0059 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 193396 193755 . - . GCA_005502385.1_01162_mRNA GCA_005502385.1_01162 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDNIWKDFAKEYMPEDKFERVCEEIKNSKNVVDVNHEFSLNSFLSVIYSKEDRKVGMRITSGYQNAFDVCYKNEKPIINEKDFGKIDLIFDNKLSIENFIETAQLLLKAYDEITKESDE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0057 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0059 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 193396 193755 . - 0 GCA_005502385.1_01162 GCA_005502385.1_01162_gene,GCA_005502385.1_01162_mRNA GCA_005502385.1_01162 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDNIWKDFAKEYMPEDKFERVCEEIKNSKNVVDVNHEFSLNSFLSVIYSKEDRKVGMRITSGYQNAFDVCYKNEKPIINEKDFGKIDLIFDNKLSIENFIETAQLLLKAYDEITKESDE cloud 119 hypothetical protein UniRef50_A0A2H4JHJ4,UniRef90_UPI00187A9DEF YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0057 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0059 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 193755 194129 . - . GCA_005502385.1_01163_gene GCA_005502385.1_01163 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVKIKVEKKMNLLELIDWAWKNGVKEKAFYSNIDGGSVYFDMVQTVSVEHSIVRTETFNVEVEEEITEDTKIPEMLEIFQDNDGTQWFGNSIEQVKDDFSREFWLKDGNTMTLIWKDGELVGDE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0058 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0060 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 193755 194129 . - . GCA_005502385.1_01163_mRNA GCA_005502385.1_01163 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVKIKVEKKMNLLELIDWAWKNGVKEKAFYSNIDGGSVYFDMVQTVSVEHSIVRTETFNVEVEEEITEDTKIPEMLEIFQDNDGTQWFGNSIEQVKDDFSREFWLKDGNTMTLIWKDGELVGDE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0058 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0060 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 193755 194129 . - 0 GCA_005502385.1_01163 GCA_005502385.1_01163_gene,GCA_005502385.1_01163_mRNA GCA_005502385.1_01163 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVKIKVEKKMNLLELIDWAWKNGVKEKAFYSNIDGGSVYFDMVQTVSVEHSIVRTETFNVEVEEEITEDTKIPEMLEIFQDNDGTQWFGNSIEQVKDDFSREFWLKDGNTMTLIWKDGELVGDE cloud 124 hypothetical protein UniRef50_UPI00066CB995,UniRef90_UPI00066CB995 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0058 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0060 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 194116 194532 . - . GCA_005502385.1_01164_gene GCA_005502385.1_01164 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKYNAKKVEYKGVVFDSKVECDYYQYLERNLGDGYDHIELQPRYELIPKLDKQRKTEYIADFALFKDDVVVEVIDVKGMPTEVAKLKAKMFRHKYPKIKLTWICKAPKYTGLEWITYEELIKVRRKRKKEKMKNGKD YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0059 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0061 shell . GCA_005502385.1|SCOV01000002.1 prokka mRNA 194116 194532 . - . GCA_005502385.1_01164_mRNA GCA_005502385.1_01164 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKYNAKKVEYKGVVFDSKVECDYYQYLERNLGDGYDHIELQPRYELIPKLDKQRKTEYIADFALFKDDVVVEVIDVKGMPTEVAKLKAKMFRHKYPKIKLTWICKAPKYTGLEWITYEELIKVRRKRKKEKMKNGKD YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0059 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0061 shell . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 194116 194532 . - 0 GCA_005502385.1_01164 GCA_005502385.1_01164_gene,GCA_005502385.1_01164_mRNA GCA_005502385.1_01164 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKYNAKKVEYKGVVFDSKVECDYYQYLERNLGDGYDHIELQPRYELIPKLDKQRKTEYIADFALFKDDVVVEVIDVKGMPTEVAKLKAKMFRHKYPKIKLTWICKAPKYTGLEWITYEELIKVRRKRKKEKMKNGKD shell 138 DUF1064 domain-containing protein UniRef50_Q9G020,UniRef90_UPI001F3A47E6 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0059 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0061 shell FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 194543 194785 . - . GCA_005502385.1_01165_gene GCA_005502385.1_01165 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGLIENQPNAYDLFESDGWKLLRVLPRDDGTFYLTNLGGMADKYFKQYVTKEELAEMKRKHKLFKREELKHQTTIDDFLF YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0060 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0062 shell . GCA_005502385.1|SCOV01000002.1 prokka mRNA 194543 194785 . - . GCA_005502385.1_01165_mRNA GCA_005502385.1_01165 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGLIENQPNAYDLFESDGWKLLRVLPRDDGTFYLTNLGGMADKYFKQYVTKEELAEMKRKHKLFKREELKHQTTIDDFLF YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0060 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0062 shell . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 194543 194785 . - 0 GCA_005502385.1_01165 GCA_005502385.1_01165_gene,GCA_005502385.1_01165_mRNA GCA_005502385.1_01165 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGLIENQPNAYDLFESDGWKLLRVLPRDDGTFYLTNLGGMADKYFKQYVTKEELAEMKRKHKLFKREELKHQTTIDDFLF shell 80 Phage protein UniRef50_A0A2T4LBP9,UniRef90_A0AA50AF44 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0060 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0062 shell FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 194933 195703 . - . GCA_005502385.1_01166_gene GCA_005502385.1_01166 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQSLGSLARNIKPNRNIVEEEHNLKCERCGNIYDYYKFSNGQEFRHGCDCSMIQAGKEAEQQRKQKYLNRIFNQSNVNASLRDATVNSYTPQNEYQIQAKNTAIEYVKTFSLDEPKSLILQGSYGTGKSHLAYAIAKAIKQQGYSVAFMHIPMLMERIKATYNRNATETTDELVQLLSSIDLLVLDDVGVENTEHTLNKLFSIVDNRVGKNNIFTTNFSDKELNQNMNWQRINSRMKQNARTVRVLGDDFRGRDAW YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0061 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0063 shell . GCA_005502385.1|SCOV01000002.1 prokka mRNA 194933 195703 . - . GCA_005502385.1_01166_mRNA GCA_005502385.1_01166 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQSLGSLARNIKPNRNIVEEEHNLKCERCGNIYDYYKFSNGQEFRHGCDCSMIQAGKEAEQQRKQKYLNRIFNQSNVNASLRDATVNSYTPQNEYQIQAKNTAIEYVKTFSLDEPKSLILQGSYGTGKSHLAYAIAKAIKQQGYSVAFMHIPMLMERIKATYNRNATETTDELVQLLSSIDLLVLDDVGVENTEHTLNKLFSIVDNRVGKNNIFTTNFSDKELNQNMNWQRINSRMKQNARTVRVLGDDFRGRDAW YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0061 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0063 shell . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 194933 195703 . - 0 GCA_005502385.1_01166 GCA_005502385.1_01166_gene,GCA_005502385.1_01166_mRNA GCA_005502385.1_01166 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQSLGSLARNIKPNRNIVEEEHNLKCERCGNIYDYYKFSNGQEFRHGCDCSMIQAGKEAEQQRKQKYLNRIFNQSNVNASLRDATVNSYTPQNEYQIQAKNTAIEYVKTFSLDEPKSLILQGSYGTGKSHLAYAIAKAIKQQGYSVAFMHIPMLMERIKATYNRNATETTDELVQLLSSIDLLVLDDVGVENTEHTLNKLFSIVDNRVGKNNIFTTNFSDKELNQNMNWQRINSRMKQNARTVRVLGDDFRGRDAW shell 256 dnaC IstB-like ATP-binding domain-containing protein COG1484,L UniRef50_Q4L3U0,UniRef90_Q4L3U0 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0061 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0063 shell FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 195716 196429 . - . GCA_005502385.1_01167_gene GCA_005502385.1_01167 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTEQPSYYSIITANVRYDNRLTDSEKLLFAEITSLSNKYGYCTATNSYFARLYEVVKETISRRISNLTKYGYLKIETVKDGKQIKQRKMYPLTQSSIPIDVKINTPIDNSVNTPIDANVKENNTSINNTSINNINRTDNSVTDVTRERFEEWWKLYDKKLDKKKAFSLFKSALKKHEFETIMNGTREYLKTITDKQYQKYPKTFLSQESYLNDFSEELQPSGMDQLNRMKYDESYWD YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0062 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0064 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 195716 196429 . - . GCA_005502385.1_01167_mRNA GCA_005502385.1_01167 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTEQPSYYSIITANVRYDNRLTDSEKLLFAEITSLSNKYGYCTATNSYFARLYEVVKETISRRISNLTKYGYLKIETVKDGKQIKQRKMYPLTQSSIPIDVKINTPIDNSVNTPIDANVKENNTSINNTSINNINRTDNSVTDVTRERFEEWWKLYDKKLDKKKAFSLFKSALKKHEFETIMNGTREYLKTITDKQYQKYPKTFLSQESYLNDFSEELQPSGMDQLNRMKYDESYWD YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0062 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0064 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 195716 196429 . - 0 GCA_005502385.1_01167 GCA_005502385.1_01167_gene,GCA_005502385.1_01167_mRNA GCA_005502385.1_01167 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTEQPSYYSIITANVRYDNRLTDSEKLLFAEITSLSNKYGYCTATNSYFARLYEVVKETISRRISNLTKYGYLKIETVKDGKQIKQRKMYPLTQSSIPIDVKINTPIDNSVNTPIDANVKENNTSINNTSINNINRTDNSVTDVTRERFEEWWKLYDKKLDKKKAFSLFKSALKKHEFETIMNGTREYLKTITDKQYQKYPKTFLSQESYLNDFSEELQPSGMDQLNRMKYDESYWD cloud 237 helix-turn-helix domain-containing protein WP_137689568.1 UPI0010F9F1EA UniRef100_UPI0010F9F1EA,UniRef50_A0A1J0MGB2,UniRef90_UPI002304538B YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0062 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0064 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 196426 196632 . - . GCA_005502385.1_01168_gene GCA_005502385.1_01168 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTIGEKIKNHRKNLGESMAEFGQRFNAKSGVVSNWENNKQKPNNKRLKLIADEMGLTVTELLNGSDET YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0063 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0065 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 196426 196632 . - . GCA_005502385.1_01168_mRNA GCA_005502385.1_01168 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTIGEKIKNHRKNLGESMAEFGQRFNAKSGVVSNWENNKQKPNNKRLKLIADEMGLTVTELLNGSDET YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0063 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0065 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 196426 196632 . - 0 GCA_005502385.1_01168 GCA_005502385.1_01168_gene,GCA_005502385.1_01168_mRNA GCA_005502385.1_01168 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTIGEKIKNHRKNLGESMAEFGQRFNAKSGVVSNWENNKQKPNNKRLKLIADEMGLTVTELLNGSDET cloud 68 helix-turn-helix transcriptional regulator WP_049395059.1 UPI00066BB712 UniRef100_UPI00066BB712,UniRef50_H9A0L7,UniRef90_UPI002DBA8811 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0063 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0065 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 196610 197302 . - . GCA_005502385.1_01169_gene GCA_005502385.1_01169 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPKIKNYITQDDGTTTVVIEGVELDNKTSLLLDNGFDVEVDVIPVDPFRITNKQRKKIFALVKDIEVHTGMPMDYMRHMFIEYVRTYYGYDERISLSNCTRTQASQIIEVTIDWVFANGIILAHKTSNLLKGDKSLLYWATVNRNCVICGKSGADLAHHYAIGRGANRKKMQHYDYEVLALCREHHSEQHNIGVKSFDEKYILQDSWIKVDSRLNAMLKGEKTNDNRRKN YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0064 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0066 shell . GCA_005502385.1|SCOV01000002.1 prokka mRNA 196610 197302 . - . GCA_005502385.1_01169_mRNA GCA_005502385.1_01169 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPKIKNYITQDDGTTTVVIEGVELDNKTSLLLDNGFDVEVDVIPVDPFRITNKQRKKIFALVKDIEVHTGMPMDYMRHMFIEYVRTYYGYDERISLSNCTRTQASQIIEVTIDWVFANGIILAHKTSNLLKGDKSLLYWATVNRNCVICGKSGADLAHHYAIGRGANRKKMQHYDYEVLALCREHHSEQHNIGVKSFDEKYILQDSWIKVDSRLNAMLKGEKTNDNRRKN YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0064 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0066 shell . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 196610 197302 . - 0 GCA_005502385.1_01169 GCA_005502385.1_01169_gene,GCA_005502385.1_01169_mRNA GCA_005502385.1_01169 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPKIKNYITQDDGTTTVVIEGVELDNKTSLLLDNGFDVEVDVIPVDPFRITNKQRKKIFALVKDIEVHTGMPMDYMRHMFIEYVRTYYGYDERISLSNCTRTQASQIIEVTIDWVFANGIILAHKTSNLLKGDKSLLYWATVNRNCVICGKSGADLAHHYAIGRGANRKKMQHYDYEVLALCREHHSEQHNIGVKSFDEKYILQDSWIKVDSRLNAMLKGEKTNDNRRKN shell 230 DUF968 domain-containing protein UniRef50_A9CR65,UniRef90_H9A0R8 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0064 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0066 shell FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 197486 197905 . - . GCA_005502385.1_01170_gene GCA_005502385.1_01170 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTNQTIITGNITNDLEVRQAGNSQVLKFGLGVRGNFKKDETNFIQVEAWGKPAEIISEYCQKGSKLLVIGELKQNRFQDKEGQNREKVYVNLDKFEFLDSKGSNQQNSQPQQQRGQAPAGNNPFANDNNANISDDDLPF YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0065 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0067 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 197486 197905 . - . GCA_005502385.1_01170_mRNA GCA_005502385.1_01170 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTNQTIITGNITNDLEVRQAGNSQVLKFGLGVRGNFKKDETNFIQVEAWGKPAEIISEYCQKGSKLLVIGELKQNRFQDKEGQNREKVYVNLDKFEFLDSKGSNQQNSQPQQQRGQAPAGNNPFANDNNANISDDDLPF YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0065 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0067 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 197486 197905 . - 0 GCA_005502385.1_01170 GCA_005502385.1_01170_gene,GCA_005502385.1_01170_mRNA GCA_005502385.1_01170 Single-stranded DNA-binding protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTNQTIITGNITNDLEVRQAGNSQVLKFGLGVRGNFKKDETNFIQVEAWGKPAEIISEYCQKGSKLLVIGELKQNRFQDKEGQNREKVYVNLDKFEFLDSKGSNQQNSQPQQQRGQAPAGNNPFANDNNANISDDDLPF cloud 139 Single-stranded DNA-binding protein WP_029376802.1 UPI000493CEC2 UniRef100_A0A8X8GHX1,UniRef50_A0A8X8GHX1,UniRef90_A0A8X8GHX1 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0065 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0067 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 197919 198581 . - . GCA_005502385.1_01171_gene GCA_005502385.1_01171 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTEKQQELNLFQKIADVKANIDGFTKDAKSYNYSYVSGSQVLHRIRNKMIENNLLLVPKTSEENYKQIDVTRFNKKAGREITTSEFIVEMNLTYVWINADKPEEQFEVTFYAVGQQDDVSKAHGTALTYAERYFLMKFFNIPTDEDDADAKEKQEKYSKPNVQKVGELKQDIFSFIDLMKERGREITEEQVKKELNITDYTKLSNGQIANAIQSLKAWSK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0066 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0068 shell . GCA_005502385.1|SCOV01000002.1 prokka mRNA 197919 198581 . - . GCA_005502385.1_01171_mRNA GCA_005502385.1_01171 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTEKQQELNLFQKIADVKANIDGFTKDAKSYNYSYVSGSQVLHRIRNKMIENNLLLVPKTSEENYKQIDVTRFNKKAGREITTSEFIVEMNLTYVWINADKPEEQFEVTFYAVGQQDDVSKAHGTALTYAERYFLMKFFNIPTDEDDADAKEKQEKYSKPNVQKVGELKQDIFSFIDLMKERGREITEEQVKKELNITDYTKLSNGQIANAIQSLKAWSK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0066 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0068 shell . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 197919 198581 . - 0 GCA_005502385.1_01171 GCA_005502385.1_01171_gene,GCA_005502385.1_01171_mRNA GCA_005502385.1_01171 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTEKQQELNLFQKIADVKANIDGFTKDAKSYNYSYVSGSQVLHRIRNKMIENNLLLVPKTSEENYKQIDVTRFNKKAGREITTSEFIVEMNLTYVWINADKPEEQFEVTFYAVGQQDDVSKAHGTALTYAERYFLMKFFNIPTDEDDADAKEKQEKYSKPNVQKVGELKQDIFSFIDLMKERGREITEEQVKKELNITDYTKLSNGQIANAIQSLKAWSK shell 220 ERF-like recombinase UniRef50_Q4L5H3,UniRef90_H9A0R5 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0066 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0068 shell FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 198574 198798 . - . GCA_005502385.1_01172_gene GCA_005502385.1_01172 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKETVTYIIKRKDNDLYVTNMPSHNFPAIKYSTEFRDAKEFNGVDKSSIDMTEHKAIKHTHIEQDKYEEVELDD YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0067 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0069 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 198574 198798 . - . GCA_005502385.1_01172_mRNA GCA_005502385.1_01172 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKETVTYIIKRKDNDLYVTNMPSHNFPAIKYSTEFRDAKEFNGVDKSSIDMTEHKAIKHTHIEQDKYEEVELDD YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0067 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0069 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 198574 198798 . - 0 GCA_005502385.1_01172 GCA_005502385.1_01172_gene,GCA_005502385.1_01172_mRNA GCA_005502385.1_01172 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKETVTYIIKRKDNDLYVTNMPSHNFPAIKYSTEFRDAKEFNGVDKSSIDMTEHKAIKHTHIEQDKYEEVELDD cloud 74 DUF2483 domain-containing protein WP_017175699.1 UPI0002FB9510 UniRef100_A0A8X8KK85,UniRef50_B2ZYV2,UniRef90_A0A1W6JNQ2 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0067 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0069 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 198758 199039 . - . GCA_005502385.1_01173_gene GCA_005502385.1_01173 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQQEYITIPFKEWKNLEKNSLDLFNLTRDLDFARQEIELLKSQREELKEDIRYWIRMYQSASTRADKNAQDIARCTEVHERERNSHLYNQTKR YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0068 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0070 shell . GCA_005502385.1|SCOV01000002.1 prokka mRNA 198758 199039 . - . GCA_005502385.1_01173_mRNA GCA_005502385.1_01173 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQQEYITIPFKEWKNLEKNSLDLFNLTRDLDFARQEIELLKSQREELKEDIRYWIRMYQSASTRADKNAQDIARCTEVHERERNSHLYNQTKR YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0068 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0070 shell . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 198758 199039 . - 0 GCA_005502385.1_01173 GCA_005502385.1_01173_gene,GCA_005502385.1_01173_mRNA GCA_005502385.1_01173 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQQEYITIPFKEWKNLEKNSLDLFNLTRDLDFARQEIELLKSQREELKEDIRYWIRMYQSASTRADKNAQDIARCTEVHERERNSHLYNQTKR shell 93 hypothetical protein WP_017175700.1 UPI0002E20A08 UniRef100_A0A8X8KIB4,UniRef50_A0A8X8KIB4,UniRef90_A0A8X8KIB4 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0068 shell YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0070 shell FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 199041 199808 . - . GCA_005502385.1_01174_gene GCA_005502385.1_01174 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNKVKVNEIYETTNYDAFKLSKSNRNVAYRKELFEEAKKGFIAPIVVDKNMTVIDGQSRLFHAQKANVPIKYFIDTDISEKDIVRMNTTQKSWSTKDYIESYANEGNEHYEKLLKLVNLNIVGASALAAISMNITMGGSTNKIVKDGHYEYRNKKTMEFLEFYKELVSKTKIPKYNNLIVAIFKLYKIKKIDTSRLINKINQTNLNEHLGVRQNISKYIELLLESYNHRTRTLETTIDYYITRNGEVIINEEMED YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0069 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0071 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 199041 199808 . - . GCA_005502385.1_01174_mRNA GCA_005502385.1_01174 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNKVKVNEIYETTNYDAFKLSKSNRNVAYRKELFEEAKKGFIAPIVVDKNMTVIDGQSRLFHAQKANVPIKYFIDTDISEKDIVRMNTTQKSWSTKDYIESYANEGNEHYEKLLKLVNLNIVGASALAAISMNITMGGSTNKIVKDGHYEYRNKKTMEFLEFYKELVSKTKIPKYNNLIVAIFKLYKIKKIDTSRLINKINQTNLNEHLGVRQNISKYIELLLESYNHRTRTLETTIDYYITRNGEVIINEEMED YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0069 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0071 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 199041 199808 . - 0 GCA_005502385.1_01174 GCA_005502385.1_01174_gene,GCA_005502385.1_01174_mRNA GCA_005502385.1_01174 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNKVKVNEIYETTNYDAFKLSKSNRNVAYRKELFEEAKKGFIAPIVVDKNMTVIDGQSRLFHAQKANVPIKYFIDTDISEKDIVRMNTTQKSWSTKDYIESYANEGNEHYEKLLKLVNLNIVGASALAAISMNITMGGSTNKIVKDGHYEYRNKKTMEFLEFYKELVSKTKIPKYNNLIVAIFKLYKIKKIDTSRLINKINQTNLNEHLGVRQNISKYIELLLESYNHRTRTLETTIDYYITRNGEVIINEEMED cloud 255 ParB/Sulfiredoxin domain-containing protein WP_017175701.1 UPI0003131B77 UniRef100_A0A8X8KHF8,UniRef50_A0A8X8KHF8,UniRef90_A0A8X8KHF8 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0069 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0071 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 199871 200059 . - . GCA_005502385.1_01175_gene GCA_005502385.1_01175 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTNSDKAMYIAGTMFLTLATALFITGMFFMKALGTALLIAVATYVFFDSFYYEKKTDTHANE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0070 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0072 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 199871 200059 . - . GCA_005502385.1_01175_mRNA GCA_005502385.1_01175 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTNSDKAMYIAGTMFLTLATALFITGMFFMKALGTALLIAVATYVFFDSFYYEKKTDTHANE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0070 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0072 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 199871 200059 . - 0 GCA_005502385.1_01175 GCA_005502385.1_01175_gene,GCA_005502385.1_01175_mRNA GCA_005502385.1_01175 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTNSDKAMYIAGTMFLTLATALFITGMFFMKALGTALLIAVATYVFFDSFYYEKKTDTHANE cloud 62 DUF1270 domain-containing protein WP_017175702.1 UPI000315BCEA UniRef100_A0A8X8KF60,UniRef50_Q4L5H0,UniRef90_A0A8X8KF60 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0070 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0072 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 200064 200378 . - . GCA_005502385.1_01176_gene GCA_005502385.1_01176 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTQTLNVTVPIPETHVVITKEEYQKLVNNSLDPIWSLEELKRKMKISSDETIKKKLLFRPKFMKIFKEKGIVHYPNEDYNRWHINARKMSDFIDEHFEEIHRKE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0071 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0073 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 200064 200378 . - . GCA_005502385.1_01176_mRNA GCA_005502385.1_01176 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTQTLNVTVPIPETHVVITKEEYQKLVNNSLDPIWSLEELKRKMKISSDETIKKKLLFRPKFMKIFKEKGIVHYPNEDYNRWHINARKMSDFIDEHFEEIHRKE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0071 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0073 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 200064 200378 . - 0 GCA_005502385.1_01176 GCA_005502385.1_01176_gene,GCA_005502385.1_01176_mRNA GCA_005502385.1_01176 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTQTLNVTVPIPETHVVITKEEYQKLVNNSLDPIWSLEELKRKMKISSDETIKKKLLFRPKFMKIFKEKGIVHYPNEDYNRWHINARKMSDFIDEHFEEIHRKE cloud 104 DUF771 domain-containing protein WP_017175703.1 UPI000312EDC1 UniRef100_A0A8X8GIA3,UniRef50_Q4L5G9,UniRef90_A0A8X8GIA3 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0071 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0073 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 200341 200943 . - . GCA_005502385.1_01177_gene GCA_005502385.1_01177 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNDKVTAIRYLSIELGKSDKEIGDFLGVHRSNITHYRKNNNIPKPTTVGRQGELAVISRLRKLDFEVEDLNLIDKSSRYDLLVNEKLKIEVKSSKRGRDGRFRFSFANKRENQCKTSENVLRLKNGKTVKNYQKFADYFIFVGIDDDVYHFWIIPTNLIKVGQQNLTLNDTYRPIFKNNFDLLKEGMKNDANIECHSTNS YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0072 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0074 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 200341 200943 . - . GCA_005502385.1_01177_mRNA GCA_005502385.1_01177 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNDKVTAIRYLSIELGKSDKEIGDFLGVHRSNITHYRKNNNIPKPTTVGRQGELAVISRLRKLDFEVEDLNLIDKSSRYDLLVNEKLKIEVKSSKRGRDGRFRFSFANKRENQCKTSENVLRLKNGKTVKNYQKFADYFIFVGIDDDVYHFWIIPTNLIKVGQQNLTLNDTYRPIFKNNFDLLKEGMKNDANIECHSTNS YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0072 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0074 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 200341 200943 . - 0 GCA_005502385.1_01177 GCA_005502385.1_01177_gene,GCA_005502385.1_01177_mRNA GCA_005502385.1_01177 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNDKVTAIRYLSIELGKSDKEIGDFLGVHRSNITHYRKNNNIPKPTTVGRQGELAVISRLRKLDFEVEDLNLIDKSSRYDLLVNEKLKIEVKSSKRGRDGRFRFSFANKRENQCKTSENVLRLKNGKTVKNYQKFADYFIFVGIDDDVYHFWIIPTNLIKVGQQNLTLNDTYRPIFKNNFDLLKEGMKNDANIECHSTNS cloud 200 PD(D/E)XK endonuclease domain-containing protein WP_017175704.1 UPI0003105C76 UniRef100_A0A8X8GQ49,UniRef50_A0A2A1K9Z1,UniRef90_A0A2A1K9Z1 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0072 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0074 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 200988 201185 . - . GCA_005502385.1_01178_gene GCA_005502385.1_01178 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKLNLDRLAKTRKRRKKTQDEMATALGFQSRSAYSKRENGVVSLGADELAIIAELLDYDITYFFD YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0073 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0075 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 200988 201185 . - . GCA_005502385.1_01178_mRNA GCA_005502385.1_01178 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKLNLDRLAKTRKRRKKTQDEMATALGFQSRSAYSKRENGVVSLGADELAIIAELLDYDITYFFD YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0073 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0075 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 200988 201185 . - 0 GCA_005502385.1_01178 GCA_005502385.1_01178_gene,GCA_005502385.1_01178_mRNA GCA_005502385.1_01178 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKLNLDRLAKTRKRRKKTQDEMATALGFQSRSAYSKRENGVVSLGADELAIIAELLDYDITYFFD cloud 65 Transcriptional regulator WP_017175705.1 UPI0003101E47 UniRef100_A0A8X8GWV5,UniRef50_A0A418IPQ6,UniRef90_A0A2A1KD95 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0073 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0075 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 201406 201732 . + . GCA_005502385.1_01179_gene GCA_005502385.1_01179 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRNNDEIIELVTKLMDKNDLSTSELARRLNIAKSSVSRYLNKTSQFPLNKVNEFSRVLNVTPEYLLGVGEYENKNQDTMAAHLDYSDLTEDEQKEVEQFIQFIRNRKK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0074 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0076 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 201406 201732 . + . GCA_005502385.1_01179_mRNA GCA_005502385.1_01179 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRNNDEIIELVTKLMDKNDLSTSELARRLNIAKSSVSRYLNKTSQFPLNKVNEFSRVLNVTPEYLLGVGEYENKNQDTMAAHLDYSDLTEDEQKEVEQFIQFIRNRKK YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0074 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0076 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 201406 201732 . + 0 GCA_005502385.1_01179 GCA_005502385.1_01179_gene,GCA_005502385.1_01179_mRNA GCA_005502385.1_01179 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRNNDEIIELVTKLMDKNDLSTSELARRLNIAKSSVSRYLNKTSQFPLNKVNEFSRVLNVTPEYLLGVGEYENKNQDTMAAHLDYSDLTEDEQKEVEQFIQFIRNRKK cloud 108 Transcriptional regulator WP_017175706.1 UPI00031DC537 UniRef100_A0A8X8KI99,UniRef50_A0A2A1KBV2,UniRef90_A0A2A1KBV2 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0074 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0076 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 201745 202206 . + . GCA_005502385.1_01180_gene GCA_005502385.1_01180 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGRYEDLLKKYDYISINETGSIPEFMSGFYMNGEIFINSNRPTTIKLETLAEELAHHEITYGNILDDKDIQNRKYELKARRLACEILIPLKELISAYLQNVHNLYELADYFEVSESFVLQTLNHYKQKFGHSTRCGKYVIQFEPLRVFEYKDI YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0075 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0077 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 201745 202206 . + . GCA_005502385.1_01180_mRNA GCA_005502385.1_01180 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGRYEDLLKKYDYISINETGSIPEFMSGFYMNGEIFINSNRPTTIKLETLAEELAHHEITYGNILDDKDIQNRKYELKARRLACEILIPLKELISAYLQNVHNLYELADYFEVSESFVLQTLNHYKQKFGHSTRCGKYVIQFEPLRVFEYKDI YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0075 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0077 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 201745 202206 . + 0 GCA_005502385.1_01180 GCA_005502385.1_01180_gene,GCA_005502385.1_01180_mRNA GCA_005502385.1_01180 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGRYEDLLKKYDYISINETGSIPEFMSGFYMNGEIFINSNRPTTIKLETLAEELAHHEITYGNILDDKDIQNRKYELKARRLACEILIPLKELISAYLQNVHNLYELADYFEVSESFVLQTLNHYKQKFGHSTRCGKYVIQFEPLRVFEYKDI cloud 153 ImmA/IrrE family metallo-endopeptidase UniRef50_A0A8X8GQM9,UniRef90_A0A8X8GQM9 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0075 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0077 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 202306 202947 . + . GCA_005502385.1_01181_gene GCA_005502385.1_01181 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGEKFNNEQEERQFRQFQEYQKQQEEEKKKKRKKSWLFGCGGCLVLLILIIVGISACTATITGGSDNSSDNKTHKMGEKVKNGDLEVTVNSVETKDSVGSQYAPTTPKGTFVVANVSIKNNGDKALTVDSNMFTLKNKDKSYDADGGASMSANQSDDGNIENSFFLEQVNPDSTTEGYVVFDVSDKVANTEDKKLEITSSLFSSKGVTFDLSE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0076 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0078 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 202306 202947 . + . GCA_005502385.1_01181_mRNA GCA_005502385.1_01181 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGEKFNNEQEERQFRQFQEYQKQQEEEKKKKRKKSWLFGCGGCLVLLILIIVGISACTATITGGSDNSSDNKTHKMGEKVKNGDLEVTVNSVETKDSVGSQYAPTTPKGTFVVANVSIKNNGDKALTVDSNMFTLKNKDKSYDADGGASMSANQSDDGNIENSFFLEQVNPDSTTEGYVVFDVSDKVANTEDKKLEITSSLFSSKGVTFDLSE YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0076 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0078 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 202306 202947 . + 0 GCA_005502385.1_01181 GCA_005502385.1_01181_gene,GCA_005502385.1_01181_mRNA GCA_005502385.1_01181 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGEKFNNEQEERQFRQFQEYQKQQEEEKKKKRKKSWLFGCGGCLVLLILIIVGISACTATITGGSDNSSDNKTHKMGEKVKNGDLEVTVNSVETKDSVGSQYAPTTPKGTFVVANVSIKNNGDKALTVDSNMFTLKNKDKSYDADGGASMSANQSDDGNIENSFFLEQVNPDSTTEGYVVFDVSDKVANTEDKKLEITSSLFSSKGVTFDLSE cloud 213 hypothetical protein YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0076 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0078 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 203005 204030 . + . GCA_005502385.1_01182_gene GCA_005502385.1_01182 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKTRCYDGKKWQYEFKYEGKRYRKKGFRTKREADAAGLERMSELKNGIDYQPNLTLSEYFKTWCETFKLSTVSPRTYKSYASAIKHISEHSIGKKPLKDISRYHYQNFINDFSKSHSKESIRKLNGYIRTSLDDAVYEGLITKNPTFKVNYKASNPNKSEDSKFINLEDYEKLKQYLKTKDNASSLVLYIMICTGCRVSGALNLKREYLNQVKNEIYIDEHKTDSSPRYVEVSKDDMKFIIHSVSKLPVTIDGSVFGNLTINAVNKRLKAYCNDLGIKEITSHALRHTHCSYLLAKGVSIYYISKRLGHKNISVTTDVYSHLLEEQYKEENQKAVEIINAM YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0077 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0079 cloud . GCA_005502385.1|SCOV01000002.1 prokka mRNA 203005 204030 . + . GCA_005502385.1_01182_mRNA GCA_005502385.1_01182 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKTRCYDGKKWQYEFKYEGKRYRKKGFRTKREADAAGLERMSELKNGIDYQPNLTLSEYFKTWCETFKLSTVSPRTYKSYASAIKHISEHSIGKKPLKDISRYHYQNFINDFSKSHSKESIRKLNGYIRTSLDDAVYEGLITKNPTFKVNYKASNPNKSEDSKFINLEDYEKLKQYLKTKDNASSLVLYIMICTGCRVSGALNLKREYLNQVKNEIYIDEHKTDSSPRYVEVSKDDMKFIIHSVSKLPVTIDGSVFGNLTINAVNKRLKAYCNDLGIKEITSHALRHTHCSYLLAKGVSIYYISKRLGHKNISVTTDVYSHLLEEQYKEENQKAVEIINAM YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0077 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0079 cloud . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 203005 204030 . + 0 GCA_005502385.1_01182 GCA_005502385.1_01182_gene,GCA_005502385.1_01182_mRNA GCA_005502385.1_01182 Tyrosine recombinase XerC GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKTRCYDGKKWQYEFKYEGKRYRKKGFRTKREADAAGLERMSELKNGIDYQPNLTLSEYFKTWCETFKLSTVSPRTYKSYASAIKHISEHSIGKKPLKDISRYHYQNFINDFSKSHSKESIRKLNGYIRTSLDDAVYEGLITKNPTFKVNYKASNPNKSEDSKFINLEDYEKLKQYLKTKDNASSLVLYIMICTGCRVSGALNLKREYLNQVKNEIYIDEHKTDSSPRYVEVSKDDMKFIIHSVSKLPVTIDGSVFGNLTINAVNKRLKAYCNDLGIKEITSHALRHTHCSYLLAKGVSIYYISKRLGHKNISVTTDVYSHLLEEQYKEENQKAVEIINAM cloud 341 Site-specific integrase WP_017175709.1 UPI0002E229D2 UniRef100_A0A8X8GMN9,UniRef50_Q38460,UniRef90_A0A8X8GMN9 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0077 cloud YES GCA_005502385.1|SCOV01000002.1@region_157309_204030@tool_genomad_CDS_0079 cloud FFF-CGN GCA_005502385.1|SCOV01000002.1 prokka gene 204161 204235 . - . GCA_005502385.1_01183_gene GCA_005502385.1_01183 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 204161 204235 . - . GCA_005502385.1_01183_mRNA GCA_005502385.1_01183 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 . . . . . . . GCA_005502385.1|SCOV01000002.1 Aragorn:001002 tRNA 204161 204235 . - . GCA_005502385.1_01183 GCA_005502385.1_01183_gene,GCA_005502385.1_01183_mRNA GCA_005502385.1_01183 tRNA-Arg(tct) GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 204459 204971 . - . GCA_005502385.1_01184_gene GCA_005502385.1_01184 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKWLIVSDNHTESGILYQLYDYHKDADICLHLGDSEFKYNDTELSLYQRVKGNCDFYPEFPNEDIIEKNSVKALYTHGHLYGVNQTRMRLAEKAQSLGCQFAFYGHTHIAKYEKLGDVHIINPGSISQSRSNIEETYAELLIEDESKKATLNFRNRDHQVIQSIEFEIN YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0078 persistent . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 204459 204971 . - . GCA_005502385.1_01184_mRNA GCA_005502385.1_01184 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKWLIVSDNHTESGILYQLYDYHKDADICLHLGDSEFKYNDTELSLYQRVKGNCDFYPEFPNEDIIEKNSVKALYTHGHLYGVNQTRMRLAEKAQSLGCQFAFYGHTHIAKYEKLGDVHIINPGSISQSRSNIEETYAELLIEDESKKATLNFRNRDHQVIQSIEFEIN YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0078 persistent . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 204459 204971 . - 0 GCA_005502385.1_01184 GCA_005502385.1_01184_gene,GCA_005502385.1_01184_mRNA GCA_005502385.1_01184 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKWLIVSDNHTESGILYQLYDYHKDADICLHLGDSEFKYNDTELSLYQRVKGNCDFYPEFPNEDIIEKNSVKALYTHGHLYGVNQTRMRLAEKAQSLGCQFAFYGHTHIAKYEKLGDVHIINPGSISQSRSNIEETYAELLIEDESKKATLNFRNRDHQVIQSIEFEIN persistent 170 Phosphoesterase WP_017175710.1 UPI0002DFCB51 UniRef100_A0A4Q9WVH4,UniRef50_Q2FZC4,UniRef90_A0A4Q9WVH4 YES GCA_005502385.1|SCOV01000002.1@region_157655_204971@tool_cenote_CDS_0078 persistent . . . PP.-C GCA_005502385.1|SCOV01000002.1 prokka gene 204971 205552 . - . GCA_005502385.1_01185_gene GCA_005502385.1_01185 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MADIVIASNNKGKINDFKAIFPNDNVIGISEIIKDFDVEETGTTFEENARLKSEAAAKALNKRVIADDSGLEVYALNGEPGVYSARYAGLEKNDESNIDKVLKKLEGETNRKAQFVCVISMSTPNEPTHMFKGTVSGEITTERKGDHGFGYDPIFYLPEKNKTMAELTTEEKSDVSHRGNAIKALNEFLEREK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 204971 205552 . - . GCA_005502385.1_01185_mRNA GCA_005502385.1_01185 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MADIVIASNNKGKINDFKAIFPNDNVIGISEIIKDFDVEETGTTFEENARLKSEAAAKALNKRVIADDSGLEVYALNGEPGVYSARYAGLEKNDESNIDKVLKKLEGETNRKAQFVCVISMSTPNEPTHMFKGTVSGEITTERKGDHGFGYDPIFYLPEKNKTMAELTTEEKSDVSHRGNAIKALNEFLEREK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 204971 205552 . - 0 GCA_005502385.1_01185 GCA_005502385.1_01185_gene,GCA_005502385.1_01185_mRNA GCA_005502385.1_01185 dITP/XTP pyrophosphatase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MADIVIASNNKGKINDFKAIFPNDNVIGISEIIKDFDVEETGTTFEENARLKSEAAAKALNKRVIADDSGLEVYALNGEPGVYSARYAGLEKNDESNIDKVLKKLEGETNRKAQFVCVISMSTPNEPTHMFKGTVSGEITTERKGDHGFGYDPIFYLPEKNKTMAELTTEEKSDVSHRGNAIKALNEFLEREK persistent 193 XTP/dITP diphosphatase 3.6.1.66 GO:0009143,GO:0047429 WP_017175711.1 UPI0002F0CEAE UniRef100_A0A3S7GXJ7,UniRef50_A0A1D7QTI2,UniRef90_A0A6N0I3Q3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 205583 206380 . - . GCA_005502385.1_01186_gene GCA_005502385.1_01186 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGEEVKTFTTQLANKLMEFDIKMLVIACNTATAVALEHLQQLLPIPVIGVIEPGARTAIMTTKNQKVLILGTEGTIKSEAYRHHIKRINPNVEVYGVACPGFVPLVEQMRYDDPTITSIVIHQTLKHWRNTDADTVILGCTHYPLLYKPINDYFGGNKKVISSGLETAREVSALLTFSNEHASYTQHPKHRFFATGDTVHIKHIISQWLKLDVEVERIKVD . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 205583 206380 . - . GCA_005502385.1_01186_mRNA GCA_005502385.1_01186 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGEEVKTFTTQLANKLMEFDIKMLVIACNTATAVALEHLQQLLPIPVIGVIEPGARTAIMTTKNQKVLILGTEGTIKSEAYRHHIKRINPNVEVYGVACPGFVPLVEQMRYDDPTITSIVIHQTLKHWRNTDADTVILGCTHYPLLYKPINDYFGGNKKVISSGLETAREVSALLTFSNEHASYTQHPKHRFFATGDTVHIKHIISQWLKLDVEVERIKVD . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 205583 206380 . - 0 GCA_005502385.1_01186 GCA_005502385.1_01186_gene,GCA_005502385.1_01186_mRNA GCA_005502385.1_01186 Glutamate racemase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGEEVKTFTTQLANKLMEFDIKMLVIACNTATAVALEHLQQLLPIPVIGVIEPGARTAIMTTKNQKVLILGTEGTIKSEAYRHHIKRINPNVEVYGVACPGFVPLVEQMRYDDPTITSIVIHQTLKHWRNTDADTVILGCTHYPLLYKPINDYFGGNKKVISSGLETAREVSALLTFSNEHASYTQHPKHRFFATGDTVHIKHIISQWLKLDVEVERIKVD persistent 265 racE glutamate racemase 5.1.1.3 GO:0008152,GO:0008360,GO:0008881,GO:0009252,GO:0071555 COG0796,M WP_002450014.1 UPI00019FAFA6 UniRef100_A0A2A1MEJ7,UniRef50_Q6GHT5,UniRef90_P52974 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 206556 207416 . - . GCA_005502385.1_01187_gene GCA_005502385.1_01187 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MMANNQSVKETPEELRHTDEQHNQEITHKEEKHTQKTVKLIVKRQDNQEAKSYEETFEIPYKENLNVIACLMEIRRNPVNSKGEKTTPVVWDMNCLEEVCGACSMVINGRARQACSAIVDQLEQPIRLEPMSTFPVIRDLQVDRTRMFDNLKRMKAWIPIDGTYDLGPGPRIPEKKRQTAYELSKCMTCGVCLEVCPNVTRNNKFIGAQAISQVRLFDLHPTGSMTKDERLNALMGEGGLQECGNSQNCVNACPKGIPLTTSIAAMNRETSFHMFKSFFGSDHQVN . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 206556 207416 . - . GCA_005502385.1_01187_mRNA GCA_005502385.1_01187 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MMANNQSVKETPEELRHTDEQHNQEITHKEEKHTQKTVKLIVKRQDNQEAKSYEETFEIPYKENLNVIACLMEIRRNPVNSKGEKTTPVVWDMNCLEEVCGACSMVINGRARQACSAIVDQLEQPIRLEPMSTFPVIRDLQVDRTRMFDNLKRMKAWIPIDGTYDLGPGPRIPEKKRQTAYELSKCMTCGVCLEVCPNVTRNNKFIGAQAISQVRLFDLHPTGSMTKDERLNALMGEGGLQECGNSQNCVNACPKGIPLTTSIAAMNRETSFHMFKSFFGSDHQVN . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 206556 207416 . - 0 GCA_005502385.1_01187 GCA_005502385.1_01187_gene,GCA_005502385.1_01187_mRNA GCA_005502385.1_01187 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MMANNQSVKETPEELRHTDEQHNQEITHKEEKHTQKTVKLIVKRQDNQEAKSYEETFEIPYKENLNVIACLMEIRRNPVNSKGEKTTPVVWDMNCLEEVCGACSMVINGRARQACSAIVDQLEQPIRLEPMSTFPVIRDLQVDRTRMFDNLKRMKAWIPIDGTYDLGPGPRIPEKKRQTAYELSKCMTCGVCLEVCPNVTRNNKFIGAQAISQVRLFDLHPTGSMTKDERLNALMGEGGLQECGNSQNCVNACPKGIPLTTSIAAMNRETSFHMFKSFFGSDHQVN persistent 286 sdhB succinate dehydrogenase iron-sulfur subunit GO:0006099,GO:0009055,GO:0016491,GO:0051536 UniRef50_P08066,UniRef90_A0A3S7H172 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 207413 209179 . - . GCA_005502385.1_01188_gene GCA_005502385.1_01188 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAEKKIIVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRSHSVCAQGGINGAVNTKGEGDSPWIHFDDTVYGGDFLANQPPVKAMTEAAPKIIHLLDRMGVMFNRTNEGLLDFRRFGGTLHHRTAYAGATTGQQLLYALDEQVRSFEVDGLVTKYEGWEFLGLVKDDENAARGIVAQNLTTSEIKSFGSDAVIMASGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQIHPTAIPGDDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKYPDYGNLVPRDIATREIFDVCINQKLGINGENMVYLDLSHKDPHELDVKLGGIIEIYEKFTGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTTIKGLFAAGECDFSQHGGNRLGANSLLSAIYGGTVAGPNAIKYVENIETSYTELDDSIYQKRVDEEQKRFDELLNMRGTENAYKLHRELGEIMTANVTVVRENDKLLETDKKIVELMERYQNIDMEDTQTWSNQAVFFTRQLWNMLQLARVITIGAYNRNESRGAHYKPEFPDRNDDEWLKTTLAEYQGEYEAPKFTYEPVDISLIPPRKRDYTSKSKGGKK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 207413 209179 . - . GCA_005502385.1_01188_mRNA GCA_005502385.1_01188 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAEKKIIVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRSHSVCAQGGINGAVNTKGEGDSPWIHFDDTVYGGDFLANQPPVKAMTEAAPKIIHLLDRMGVMFNRTNEGLLDFRRFGGTLHHRTAYAGATTGQQLLYALDEQVRSFEVDGLVTKYEGWEFLGLVKDDENAARGIVAQNLTTSEIKSFGSDAVIMASGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQIHPTAIPGDDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKYPDYGNLVPRDIATREIFDVCINQKLGINGENMVYLDLSHKDPHELDVKLGGIIEIYEKFTGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTTIKGLFAAGECDFSQHGGNRLGANSLLSAIYGGTVAGPNAIKYVENIETSYTELDDSIYQKRVDEEQKRFDELLNMRGTENAYKLHRELGEIMTANVTVVRENDKLLETDKKIVELMERYQNIDMEDTQTWSNQAVFFTRQLWNMLQLARVITIGAYNRNESRGAHYKPEFPDRNDDEWLKTTLAEYQGEYEAPKFTYEPVDISLIPPRKRDYTSKSKGGKK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 207413 209179 . - 0 GCA_005502385.1_01188 GCA_005502385.1_01188_gene,GCA_005502385.1_01188_mRNA GCA_005502385.1_01188 Fumarate reductase flavoprotein subunit GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAEKKIIVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRSHSVCAQGGINGAVNTKGEGDSPWIHFDDTVYGGDFLANQPPVKAMTEAAPKIIHLLDRMGVMFNRTNEGLLDFRRFGGTLHHRTAYAGATTGQQLLYALDEQVRSFEVDGLVTKYEGWEFLGLVKDDENAARGIVAQNLTTSEIKSFGSDAVIMASGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQIHPTAIPGDDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKYPDYGNLVPRDIATREIFDVCINQKLGINGENMVYLDLSHKDPHELDVKLGGIIEIYEKFTGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTTIKGLFAAGECDFSQHGGNRLGANSLLSAIYGGTVAGPNAIKYVENIETSYTELDDSIYQKRVDEEQKRFDELLNMRGTENAYKLHRELGEIMTANVTVVRENDKLLETDKKIVELMERYQNIDMEDTQTWSNQAVFFTRQLWNMLQLARVITIGAYNRNESRGAHYKPEFPDRNDDEWLKTTLAEYQGEYEAPKFTYEPVDISLIPPRKRDYTSKSKGGKK persistent 588 sdhA succinate dehydrogenase flavoprotein subunit C,COG1053 WP_049416189.1 UPI00066E06AE UniRef100_UPI00066E06AE,UniRef50_P08065,UniRef90_A0A2G7I0V1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 209260 209874 . - . GCA_005502385.1_01189_gene GCA_005502385.1_01189 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAKSKNEFYLRRLHSLLGIIPIGAFLIVHLMINHQATQGAEAFNKAAGFMESLPFLLVTELILIYIPILYHGLYGIHIAFTAKENIGHYSLFRNWMFALQRLTGIIAFVFIFVHLWQTRLQKLFFGKEISYDMMHQTLQNPIWVIVYIICVIAVIFHFSNGIWSFLVTWGFLQSKKSQRIFTWVSLIIFLILSYIGVTAILAFA . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 209260 209874 . - . GCA_005502385.1_01189_mRNA GCA_005502385.1_01189 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAKSKNEFYLRRLHSLLGIIPIGAFLIVHLMINHQATQGAEAFNKAAGFMESLPFLLVTELILIYIPILYHGLYGIHIAFTAKENIGHYSLFRNWMFALQRLTGIIAFVFIFVHLWQTRLQKLFFGKEISYDMMHQTLQNPIWVIVYIICVIAVIFHFSNGIWSFLVTWGFLQSKKSQRIFTWVSLIIFLILSYIGVTAILAFA . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 209260 209874 . - 0 GCA_005502385.1_01189 GCA_005502385.1_01189_gene,GCA_005502385.1_01189_mRNA GCA_005502385.1_01189 Succinate dehydrogenase cytochrome b558 subunit GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAKSKNEFYLRRLHSLLGIIPIGAFLIVHLMINHQATQGAEAFNKAAGFMESLPFLLVTELILIYIPILYHGLYGIHIAFTAKENIGHYSLFRNWMFALQRLTGIIAFVFIFVHLWQTRLQKLFFGKEISYDMMHQTLQNPIWVIVYIICVIAVIFHFSNGIWSFLVTWGFLQSKKSQRIFTWVSLIIFLILSYIGVTAILAFA persistent 204 sdhC succinate dehydrogenase, cytochrome b556 subunit GO:0000104,GO:0006099,GO:0009055,GO:0045273 WP_017175714.1 UPI0002D2BC8B UniRef100_A0A3S7GWT4,UniRef50_P08064,UniRef90_A0A3S7GWT4 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 210295 212079 . - . GCA_005502385.1_01190_gene GCA_005502385.1_01190 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTDYEEKIRDKLSVVPFEPGCYLMKDRNDQIIYVGKAKRLRNRLRSYFTGAHDAKTTRLVSEIRNFEFIVTSSETESLLLELNLIKQYQPRYNILLKDDKSYPFIKIAKEKHPRLLVTRTVKKGTGKYFGPYPNAYSAQETKKLLDRIYPFRKCDKMPDKLCLYYHIGQCMGPCVYDVDQQKYAQMTREITDFLNGEDKTILHNLETRMLDASEKLDFERAKEYRDLIQHIHNLTKKQKIMSSDNTIRDVFGYSVSKGWMCIQVFFIRQGNMIQRDATMIPLQQTEEEEFYTFIGQFYSLNQHILPKEVHVPKNLDKDIIHSVVDTKIVLPARGTKKEMVDLANHNAEVALENKFQLIAKDESRTIKAIEELGERMGIQTPIRIEAFDNSNIQGVDPVSAMVTFVDGKPDKKGYRKYKIKTVKGPDDYKSMREVVRRRYTRVLNEGLPLPDLIIVDGGKGHMSGVIDVLENELGLDIPVAGLRKNDKHQTSELLYGTNAEVVPLKKNSQAFYLLHRIQDEVHRFAITFHRQTRQKTGLQSVLDTVEGIGSKRKTKLLRTFGSIKKMKEASIEDLKAAGLPKKVAENLQYALKED . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 210295 212079 . - . GCA_005502385.1_01190_mRNA GCA_005502385.1_01190 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTDYEEKIRDKLSVVPFEPGCYLMKDRNDQIIYVGKAKRLRNRLRSYFTGAHDAKTTRLVSEIRNFEFIVTSSETESLLLELNLIKQYQPRYNILLKDDKSYPFIKIAKEKHPRLLVTRTVKKGTGKYFGPYPNAYSAQETKKLLDRIYPFRKCDKMPDKLCLYYHIGQCMGPCVYDVDQQKYAQMTREITDFLNGEDKTILHNLETRMLDASEKLDFERAKEYRDLIQHIHNLTKKQKIMSSDNTIRDVFGYSVSKGWMCIQVFFIRQGNMIQRDATMIPLQQTEEEEFYTFIGQFYSLNQHILPKEVHVPKNLDKDIIHSVVDTKIVLPARGTKKEMVDLANHNAEVALENKFQLIAKDESRTIKAIEELGERMGIQTPIRIEAFDNSNIQGVDPVSAMVTFVDGKPDKKGYRKYKIKTVKGPDDYKSMREVVRRRYTRVLNEGLPLPDLIIVDGGKGHMSGVIDVLENELGLDIPVAGLRKNDKHQTSELLYGTNAEVVPLKKNSQAFYLLHRIQDEVHRFAITFHRQTRQKTGLQSVLDTVEGIGSKRKTKLLRTFGSIKKMKEASIEDLKAAGLPKKVAENLQYALKED . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 210295 212079 . - 0 GCA_005502385.1_01190 GCA_005502385.1_01190_gene,GCA_005502385.1_01190_mRNA GCA_005502385.1_01190 UvrABC system protein C GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTDYEEKIRDKLSVVPFEPGCYLMKDRNDQIIYVGKAKRLRNRLRSYFTGAHDAKTTRLVSEIRNFEFIVTSSETESLLLELNLIKQYQPRYNILLKDDKSYPFIKIAKEKHPRLLVTRTVKKGTGKYFGPYPNAYSAQETKKLLDRIYPFRKCDKMPDKLCLYYHIGQCMGPCVYDVDQQKYAQMTREITDFLNGEDKTILHNLETRMLDASEKLDFERAKEYRDLIQHIHNLTKKQKIMSSDNTIRDVFGYSVSKGWMCIQVFFIRQGNMIQRDATMIPLQQTEEEEFYTFIGQFYSLNQHILPKEVHVPKNLDKDIIHSVVDTKIVLPARGTKKEMVDLANHNAEVALENKFQLIAKDESRTIKAIEELGERMGIQTPIRIEAFDNSNIQGVDPVSAMVTFVDGKPDKKGYRKYKIKTVKGPDDYKSMREVVRRRYTRVLNEGLPLPDLIIVDGGKGHMSGVIDVLENELGLDIPVAGLRKNDKHQTSELLYGTNAEVVPLKKNSQAFYLLHRIQDEVHRFAITFHRQTRQKTGLQSVLDTVEGIGSKRKTKLLRTFGSIKKMKEASIEDLKAAGLPKKVAENLQYALKED persistent 594 uvrC excinuclease ABC subunit UvrC GO:0003677,GO:0005737,GO:0006289,GO:0009380,GO:0009381,GO:0009432 COG0322,L UniRef50_Q8DQQ9,UniRef90_Q4L5F1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 212176 212490 . - . GCA_005502385.1_01191_gene GCA_005502385.1_01191 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAIVKVTDSNFDENIQSGVKLVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGEAVDKVVGFQPKENLAEVLDKHL . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 212176 212490 . - . GCA_005502385.1_01191_mRNA GCA_005502385.1_01191 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAIVKVTDSNFDENIQSGVKLVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGEAVDKVVGFQPKENLAEVLDKHL . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 212176 212490 . - 0 GCA_005502385.1_01191 GCA_005502385.1_01191_gene,GCA_005502385.1_01191_mRNA GCA_005502385.1_01191 Thioredoxin GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAIVKVTDSNFDENIQSGVKLVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGEAVDKVVGFQPKENLAEVLDKHL persistent 104 trxA thioredoxin GO:0005829,GO:0015035,GO:0045454 COG3118,O WP_002449989.1 UPI00019FB178 UniRef100_A0A1L8YA25,UniRef50_P14949,UniRef90_Q49WR2 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 212671 215022 . - . GCA_005502385.1_01192_gene GCA_005502385.1_01192 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRQKTLDVLEFDKIKSFVASETISDLGREKVSKMSPATDFETVEFQMNETDEISQIYNKHRLPSLSGLSKVSPLIHRAKIGGVLNVTELNVIKRLIQVQNQFKTFYNQLLEEDEGVVKYPILNERMNQLPVLTDLYQEINEKCDAYDLYDNASYELQGIRSKISSTTQRIRQNLDRIVKSQANQKKLSDAIITVRNDRNVIPVKAEYRQDFKGIVHDQSASGQTLYIEPSSIVEMNNQISRLRNDEAVERERILTELTGFVAADDDNCLVAESVMGQIDFLTAKARYARSIKGTKPTFYKERTVYLPNAYHPLLNKDTVVANTIEFIDDIETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILKETDKNSLVLFDELGAGTDPSEGAALAMSILDHVREIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISKKLGLGLNIINKAKTMIGTDEQEINSMIESLEKNSKRVDEQRIELEKLLREARTTHDDLKRQYQQYKNYEQKLMDEAKDKANQRIKSATKEADDILKDLREMRDKKGADVKEHELIDKKKHLEDQYEAKSLKQNVKKQKWDDIHAGDEVKVLSYGQKGEVLELSGENEAVVQMGIIKMKLPIEDLEKTKKKKEKPTKMVTRQNRQTIKTELDLRGYRYEEAVGALDQYIDQAVLSNYEQVYIIHGKGTGALQKAVQNHLKKHKSVKSFRGGMPSEGGFGVTVAELK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 212671 215022 . - . GCA_005502385.1_01192_mRNA GCA_005502385.1_01192 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRQKTLDVLEFDKIKSFVASETISDLGREKVSKMSPATDFETVEFQMNETDEISQIYNKHRLPSLSGLSKVSPLIHRAKIGGVLNVTELNVIKRLIQVQNQFKTFYNQLLEEDEGVVKYPILNERMNQLPVLTDLYQEINEKCDAYDLYDNASYELQGIRSKISSTTQRIRQNLDRIVKSQANQKKLSDAIITVRNDRNVIPVKAEYRQDFKGIVHDQSASGQTLYIEPSSIVEMNNQISRLRNDEAVERERILTELTGFVAADDDNCLVAESVMGQIDFLTAKARYARSIKGTKPTFYKERTVYLPNAYHPLLNKDTVVANTIEFIDDIETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILKETDKNSLVLFDELGAGTDPSEGAALAMSILDHVREIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISKKLGLGLNIINKAKTMIGTDEQEINSMIESLEKNSKRVDEQRIELEKLLREARTTHDDLKRQYQQYKNYEQKLMDEAKDKANQRIKSATKEADDILKDLREMRDKKGADVKEHELIDKKKHLEDQYEAKSLKQNVKKQKWDDIHAGDEVKVLSYGQKGEVLELSGENEAVVQMGIIKMKLPIEDLEKTKKKKEKPTKMVTRQNRQTIKTELDLRGYRYEEAVGALDQYIDQAVLSNYEQVYIIHGKGTGALQKAVQNHLKKHKSVKSFRGGMPSEGGFGVTVAELK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 212671 215022 . - 0 GCA_005502385.1_01192 GCA_005502385.1_01192_gene,GCA_005502385.1_01192_mRNA GCA_005502385.1_01192 Endonuclease MutS2 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRQKTLDVLEFDKIKSFVASETISDLGREKVSKMSPATDFETVEFQMNETDEISQIYNKHRLPSLSGLSKVSPLIHRAKIGGVLNVTELNVIKRLIQVQNQFKTFYNQLLEEDEGVVKYPILNERMNQLPVLTDLYQEINEKCDAYDLYDNASYELQGIRSKISSTTQRIRQNLDRIVKSQANQKKLSDAIITVRNDRNVIPVKAEYRQDFKGIVHDQSASGQTLYIEPSSIVEMNNQISRLRNDEAVERERILTELTGFVAADDDNCLVAESVMGQIDFLTAKARYARSIKGTKPTFYKERTVYLPNAYHPLLNKDTVVANTIEFIDDIETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILKETDKNSLVLFDELGAGTDPSEGAALAMSILDHVREIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISKKLGLGLNIINKAKTMIGTDEQEINSMIESLEKNSKRVDEQRIELEKLLREARTTHDDLKRQYQQYKNYEQKLMDEAKDKANQRIKSATKEADDILKDLREMRDKKGADVKEHELIDKKKHLEDQYEAKSLKQNVKKQKWDDIHAGDEVKVLSYGQKGEVLELSGENEAVVQMGIIKMKLPIEDLEKTKKKKEKPTKMVTRQNRQTIKTELDLRGYRYEEAVGALDQYIDQAVLSNYEQVYIIHGKGTGALQKAVQNHLKKHKSVKSFRGGMPSEGGFGVTVAELK persistent 783 mutS2 Endonuclease MutS2 UniRef50_Q2FZD3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 215032 216786 . - . GCA_005502385.1_01193_gene GCA_005502385.1_01193 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDINLLVSFYGVNVMTKKDVIQLLEKIAIYMELNGENTFKVSAYRKAAQSLEIDERSLDEIKDVTELKGIGKGVGEVISEYRETGTSSTLKELQRLVPEGLIPLMKIQGLGSKKIAKLYKELNITDKEHLQEACEAGKVSELSGFAKKTEQNILEAVKALGAKKDHYPIDLMRHLNKDIMTYLEQLEEVEHYSEAGSFRRYKEVSKDLDYIISTRHPLHVQQHLLNIPNKVKEVAVGETKVSLELEYDDETIGVDFRLVEPEAFYHTLQHFTGSKDHNIRIRQLAKAQNEKVSEYGIEQQDGTLLQFQSEAEIYQHFGRHWIAPAMREDGSEFDRDLNSIITLDDIKGDLHMHTTYSDGAFSIREMIEANIKKGYEYMVITDHSKSLKVAHGLQVERLLRQNEEIKNLNEEYTEIDIYSGTEMDILPDGSLDYEDDILSQLDYVIAAIHQSFNQSEEEIMKRLEHACRNPYVRHIAHPTGRIIERREGYQPNIEQLMQLAEETQTVMEINANPKRLDLNAATVKKYPNIKLTINTDAHHVDHLDFMKYGVATAQKGFVNKDRVINTMTRDAFKNFINNNIKLQK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 215032 216786 . - . GCA_005502385.1_01193_mRNA GCA_005502385.1_01193 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDINLLVSFYGVNVMTKKDVIQLLEKIAIYMELNGENTFKVSAYRKAAQSLEIDERSLDEIKDVTELKGIGKGVGEVISEYRETGTSSTLKELQRLVPEGLIPLMKIQGLGSKKIAKLYKELNITDKEHLQEACEAGKVSELSGFAKKTEQNILEAVKALGAKKDHYPIDLMRHLNKDIMTYLEQLEEVEHYSEAGSFRRYKEVSKDLDYIISTRHPLHVQQHLLNIPNKVKEVAVGETKVSLELEYDDETIGVDFRLVEPEAFYHTLQHFTGSKDHNIRIRQLAKAQNEKVSEYGIEQQDGTLLQFQSEAEIYQHFGRHWIAPAMREDGSEFDRDLNSIITLDDIKGDLHMHTTYSDGAFSIREMIEANIKKGYEYMVITDHSKSLKVAHGLQVERLLRQNEEIKNLNEEYTEIDIYSGTEMDILPDGSLDYEDDILSQLDYVIAAIHQSFNQSEEEIMKRLEHACRNPYVRHIAHPTGRIIERREGYQPNIEQLMQLAEETQTVMEINANPKRLDLNAATVKKYPNIKLTINTDAHHVDHLDFMKYGVATAQKGFVNKDRVINTMTRDAFKNFINNNIKLQK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 215032 216786 . - 0 GCA_005502385.1_01193 GCA_005502385.1_01193_gene,GCA_005502385.1_01193_mRNA GCA_005502385.1_01193 DNA polymerase/3'-5' exonuclease PolX GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MDINLLVSFYGVNVMTKKDVIQLLEKIAIYMELNGENTFKVSAYRKAAQSLEIDERSLDEIKDVTELKGIGKGVGEVISEYRETGTSSTLKELQRLVPEGLIPLMKIQGLGSKKIAKLYKELNITDKEHLQEACEAGKVSELSGFAKKTEQNILEAVKALGAKKDHYPIDLMRHLNKDIMTYLEQLEEVEHYSEAGSFRRYKEVSKDLDYIISTRHPLHVQQHLLNIPNKVKEVAVGETKVSLELEYDDETIGVDFRLVEPEAFYHTLQHFTGSKDHNIRIRQLAKAQNEKVSEYGIEQQDGTLLQFQSEAEIYQHFGRHWIAPAMREDGSEFDRDLNSIITLDDIKGDLHMHTTYSDGAFSIREMIEANIKKGYEYMVITDHSKSLKVAHGLQVERLLRQNEEIKNLNEEYTEIDIYSGTEMDILPDGSLDYEDDILSQLDYVIAAIHQSFNQSEEEIMKRLEHACRNPYVRHIAHPTGRIIERREGYQPNIEQLMQLAEETQTVMEINANPKRLDLNAATVKKYPNIKLTINTDAHHVDHLDFMKYGVATAQKGFVNKDRVINTMTRDAFKNFINNNIKLQK persistent 584 polX DNA polymerase/3'-5' exonuclease PolX GO:0003677,GO:0003887,GO:0006281 UniRef50_A0A0U1MIQ0,UniRef90_A0A8X8GI90 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 216818 217339 . - . GCA_005502385.1_01194_gene GCA_005502385.1_01194 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTIDLVMILIILMYMIIGFRRGLWLNSLHLSSTLVSLFIAHRFYQYISKQMIVFVPFPKTVAFDTHFAFQYHDVQQRFDTIVAFLCIAFISKLLLYLIIVTFDNIVSYHNIHVTSRILGSLLGSIASVIVLQLVLYLVSLYPNEWIQESLKHGYLSHIILFKMPFLSSYILNL . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 216818 217339 . - . GCA_005502385.1_01194_mRNA GCA_005502385.1_01194 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTIDLVMILIILMYMIIGFRRGLWLNSLHLSSTLVSLFIAHRFYQYISKQMIVFVPFPKTVAFDTHFAFQYHDVQQRFDTIVAFLCIAFISKLLLYLIIVTFDNIVSYHNIHVTSRILGSLLGSIASVIVLQLVLYLVSLYPNEWIQESLKHGYLSHIILFKMPFLSSYILNL . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 216818 217339 . - 0 GCA_005502385.1_01194 GCA_005502385.1_01194_gene,GCA_005502385.1_01194_mRNA GCA_005502385.1_01194 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTIDLVMILIILMYMIIGFRRGLWLNSLHLSSTLVSLFIAHRFYQYISKQMIVFVPFPKTVAFDTHFAFQYHDVQQRFDTIVAFLCIAFISKLLLYLIIVTFDNIVSYHNIHVTSRILGSLLGSIASVIVLQLVLYLVSLYPNEWIQESLKHGYLSHIILFKMPFLSSYILNL persistent 173 cvpA Colicin V production protein CvpA WP_017175718.1 UPI0002FE60B6 UniRef100_A0A4Q9WVH6,UniRef50_A0A657M562,UniRef90_A0A657M562 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 217340 217606 . - . GCA_005502385.1_01195_gene GCA_005502385.1_01195 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGEFKNRINVSINDQNFTIIGDDDPEHIRYVAHLVDEQLRLLGRKSAGLDTTRKAILTAVNIMDEKVKLEEENEILKQMIYELKQQDS . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 217340 217606 . - . GCA_005502385.1_01195_mRNA GCA_005502385.1_01195 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGEFKNRINVSINDQNFTIIGDDDPEHIRYVAHLVDEQLRLLGRKSAGLDTTRKAILTAVNIMDEKVKLEEENEILKQMIYELKQQDS . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 217340 217606 . - 0 GCA_005502385.1_01195 GCA_005502385.1_01195_gene,GCA_005502385.1_01195_mRNA GCA_005502385.1_01195 Cell division protein ZapA GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGEFKNRINVSINDQNFTIIGDDDPEHIRYVAHLVDEQLRLLGRKSAGLDTTRKAILTAVNIMDEKVKLEEENEILKQMIYELKQQDS persistent 88 zapA cell division protein ZapA GO:0051301 WP_017175719.1 UPI0002D816E8 UniRef100_A0A4Q9WTJ6,UniRef50_A0A085UFE6,UniRef90_A0A657ZT25 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 217820 218746 . + . GCA_005502385.1_01196_gene GCA_005502385.1_01196 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGNVVHKLTNQDIEQLLNQINFSTSNLPNGMKARTKYHDTVISIYNSGKVMFQGKHAEHIARQFCTTDSVTNSKSSKADDLHNITYNDYNCIGSDEAGSGDYFGPLTVCAAFVSKEHIDILRTLGVDDSKKLTDTKIIELAEQLITFIPHSLLTLNNTKYNERQALGWSQVKMKAVLHNEAIKNVTNKIDTKALDYIVIDQFAERNVYKRYALSDLPFPNQTKFETKGESKSLAIAAASIISRYAFIKHMDSISKMMHFDIPKGASHKVDLIAAQIIEKYNISKLDSISKKHFKNRDKAWTLVNKKYQ . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 217820 218746 . + . GCA_005502385.1_01196_mRNA GCA_005502385.1_01196 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGNVVHKLTNQDIEQLLNQINFSTSNLPNGMKARTKYHDTVISIYNSGKVMFQGKHAEHIARQFCTTDSVTNSKSSKADDLHNITYNDYNCIGSDEAGSGDYFGPLTVCAAFVSKEHIDILRTLGVDDSKKLTDTKIIELAEQLITFIPHSLLTLNNTKYNERQALGWSQVKMKAVLHNEAIKNVTNKIDTKALDYIVIDQFAERNVYKRYALSDLPFPNQTKFETKGESKSLAIAAASIISRYAFIKHMDSISKMMHFDIPKGASHKVDLIAAQIIEKYNISKLDSISKKHFKNRDKAWTLVNKKYQ . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 217820 218746 . + 0 GCA_005502385.1_01196 GCA_005502385.1_01196_gene,GCA_005502385.1_01196_mRNA GCA_005502385.1_01196 Ribonuclease HIII GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGNVVHKLTNQDIEQLLNQINFSTSNLPNGMKARTKYHDTVISIYNSGKVMFQGKHAEHIARQFCTTDSVTNSKSSKADDLHNITYNDYNCIGSDEAGSGDYFGPLTVCAAFVSKEHIDILRTLGVDDSKKLTDTKIIELAEQLITFIPHSLLTLNNTKYNERQALGWSQVKMKAVLHNEAIKNVTNKIDTKALDYIVIDQFAERNVYKRYALSDLPFPNQTKFETKGESKSLAIAAASIISRYAFIKHMDSISKMMHFDIPKGASHKVDLIAAQIIEKYNISKLDSISKKHFKNRDKAWTLVNKKYQ persistent 308 rnhC ribonuclease HIII 3.1.26.4 GO:0004523,GO:0005737,GO:0006401 WP_017175720.1 UPI0002D5FD73 UniRef100_A0A4V2KXF2,UniRef50_Q2FZD7,UniRef90_A0A4V2KXF2 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 219176 221578 . - . GCA_005502385.1_01197_gene GCA_005502385.1_01197 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLISNEWLKDYVDAGVPAKDLAERITRTGIEVADIIDYSKDIKNVVVGYVTSKEKHPDADKLNICQVDIGEEELVQIVCGAPNVDENQYVIVAKVGGRLPGGIKIKRAKLRGERSEGMICSLQEIGVSSNVVPKDYENGIFVFPSEVTPGTDALDALYLNDQIMEFDLTPNRADALSMVGTAYEVAALYQTEMTKPNTTLNETETSATDELSVTVDNPEKVPYYSARVVKNVRIAPSPIWMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDHMGSKDIVVRQANENETMTTLDDTERTLIDTDIVITNGKEPIALAGVMGGDFSEVTDQTMNVVVEGAIFDPVSIRHTSRRLNLRSESSSRFEKGIATEFVNEAVDRACYLLEHYASGEVLKDRVAQGDLGSLVTPIDITAEKVNQTIGFNLSNDEIKAIFEQLGFKTIQNADTLTVYVPSRRKDISIKEDLIEEIARIYGYDNIPSTLPVFDDVTSGKLTDRQYKTRTVKETLEGAGLNQAITYSLVSKDHAKDFALQERPTISLLMPMSEAHSTLRQSLLPHLIEATTYNVARKNKNVRLYEIGRVFFGNGKDELPDEIEYLSGILTGEYVVNTWQGKKEEIDFFIAKGVVDRIAEKLNLDFTYKAGEIKGLHPGRTAIVSLEGKEIGFVGELHPQLAAENDLKRTYVFELDYDAMMQVAVGYINYEPIPKFPGVSRDIAMEVKRDMPSSELLDIIHENGEDILKNTLVFDVYEGEHLEEGKKSVAIRLNYLDTENTLTDERVSKVHDKILEALKAKGATIR . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 219176 221578 . - . GCA_005502385.1_01197_mRNA GCA_005502385.1_01197 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLISNEWLKDYVDAGVPAKDLAERITRTGIEVADIIDYSKDIKNVVVGYVTSKEKHPDADKLNICQVDIGEEELVQIVCGAPNVDENQYVIVAKVGGRLPGGIKIKRAKLRGERSEGMICSLQEIGVSSNVVPKDYENGIFVFPSEVTPGTDALDALYLNDQIMEFDLTPNRADALSMVGTAYEVAALYQTEMTKPNTTLNETETSATDELSVTVDNPEKVPYYSARVVKNVRIAPSPIWMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDHMGSKDIVVRQANENETMTTLDDTERTLIDTDIVITNGKEPIALAGVMGGDFSEVTDQTMNVVVEGAIFDPVSIRHTSRRLNLRSESSSRFEKGIATEFVNEAVDRACYLLEHYASGEVLKDRVAQGDLGSLVTPIDITAEKVNQTIGFNLSNDEIKAIFEQLGFKTIQNADTLTVYVPSRRKDISIKEDLIEEIARIYGYDNIPSTLPVFDDVTSGKLTDRQYKTRTVKETLEGAGLNQAITYSLVSKDHAKDFALQERPTISLLMPMSEAHSTLRQSLLPHLIEATTYNVARKNKNVRLYEIGRVFFGNGKDELPDEIEYLSGILTGEYVVNTWQGKKEEIDFFIAKGVVDRIAEKLNLDFTYKAGEIKGLHPGRTAIVSLEGKEIGFVGELHPQLAAENDLKRTYVFELDYDAMMQVAVGYINYEPIPKFPGVSRDIAMEVKRDMPSSELLDIIHENGEDILKNTLVFDVYEGEHLEEGKKSVAIRLNYLDTENTLTDERVSKVHDKILEALKAKGATIR . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 219176 221578 . - 0 GCA_005502385.1_01197 GCA_005502385.1_01197_gene,GCA_005502385.1_01197_mRNA GCA_005502385.1_01197 Phenylalanine--tRNA ligase beta subunit GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLISNEWLKDYVDAGVPAKDLAERITRTGIEVADIIDYSKDIKNVVVGYVTSKEKHPDADKLNICQVDIGEEELVQIVCGAPNVDENQYVIVAKVGGRLPGGIKIKRAKLRGERSEGMICSLQEIGVSSNVVPKDYENGIFVFPSEVTPGTDALDALYLNDQIMEFDLTPNRADALSMVGTAYEVAALYQTEMTKPNTTLNETETSATDELSVTVDNPEKVPYYSARVVKNVRIAPSPIWMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDHMGSKDIVVRQANENETMTTLDDTERTLIDTDIVITNGKEPIALAGVMGGDFSEVTDQTMNVVVEGAIFDPVSIRHTSRRLNLRSESSSRFEKGIATEFVNEAVDRACYLLEHYASGEVLKDRVAQGDLGSLVTPIDITAEKVNQTIGFNLSNDEIKAIFEQLGFKTIQNADTLTVYVPSRRKDISIKEDLIEEIARIYGYDNIPSTLPVFDDVTSGKLTDRQYKTRTVKETLEGAGLNQAITYSLVSKDHAKDFALQERPTISLLMPMSEAHSTLRQSLLPHLIEATTYNVARKNKNVRLYEIGRVFFGNGKDELPDEIEYLSGILTGEYVVNTWQGKKEEIDFFIAKGVVDRIAEKLNLDFTYKAGEIKGLHPGRTAIVSLEGKEIGFVGELHPQLAAENDLKRTYVFELDYDAMMQVAVGYINYEPIPKFPGVSRDIAMEVKRDMPSSELLDIIHENGEDILKNTLVFDVYEGEHLEEGKKSVAIRLNYLDTENTLTDERVSKVHDKILEALKAKGATIR persistent 800 pheT phenylalanine--tRNA ligase subunit beta 6.1.1.20 GO:0000287,GO:0004826,GO:0005524,GO:0006432 WP_019835744.1 UPI00037E4986 UniRef100_UPI00037E4986,UniRef50_Q4L5E4,UniRef90_A0A6N0I3N2 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 221578 222636 . - . GCA_005502385.1_01198_gene GCA_005502385.1_01198 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTQNDSMTELRQQALVDINEAQDERALQDVKVKYLGKKGSVSGLMKNMKDLPNEEKPAYGQKVNELRQAIQNELEEKQELLKNEKLNQQLAEETIDVTLPSRQINIGSKHPLTRTVEEIEDLFLGLGYEIVDGYEVEQDYYNFEALNLPKSHPARDMQDSFYITDEILMRTHTSPVQARTMEKRHGQGPVKIICPGKVYRRDSDDATHSHQFTQIEGLVVDKHIKMSDLKGTLELVAKKLFGADREIRLRPSYFPFTEPSVEVDVSCFKCKGKGCNVCKHTGWIEILGAGMVHPNVLEMAGFDSNEYSGFAFGMGPDRIAMLKYGIEDIRHFYTNDVRFLNQFKAVEDRGEA . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 221578 222636 . - . GCA_005502385.1_01198_mRNA GCA_005502385.1_01198 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTQNDSMTELRQQALVDINEAQDERALQDVKVKYLGKKGSVSGLMKNMKDLPNEEKPAYGQKVNELRQAIQNELEEKQELLKNEKLNQQLAEETIDVTLPSRQINIGSKHPLTRTVEEIEDLFLGLGYEIVDGYEVEQDYYNFEALNLPKSHPARDMQDSFYITDEILMRTHTSPVQARTMEKRHGQGPVKIICPGKVYRRDSDDATHSHQFTQIEGLVVDKHIKMSDLKGTLELVAKKLFGADREIRLRPSYFPFTEPSVEVDVSCFKCKGKGCNVCKHTGWIEILGAGMVHPNVLEMAGFDSNEYSGFAFGMGPDRIAMLKYGIEDIRHFYTNDVRFLNQFKAVEDRGEA . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 221578 222636 . - 0 GCA_005502385.1_01198 GCA_005502385.1_01198_gene,GCA_005502385.1_01198_mRNA GCA_005502385.1_01198 Phenylalanine--tRNA ligase alpha subunit GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTQNDSMTELRQQALVDINEAQDERALQDVKVKYLGKKGSVSGLMKNMKDLPNEEKPAYGQKVNELRQAIQNELEEKQELLKNEKLNQQLAEETIDVTLPSRQINIGSKHPLTRTVEEIEDLFLGLGYEIVDGYEVEQDYYNFEALNLPKSHPARDMQDSFYITDEILMRTHTSPVQARTMEKRHGQGPVKIICPGKVYRRDSDDATHSHQFTQIEGLVVDKHIKMSDLKGTLELVAKKLFGADREIRLRPSYFPFTEPSVEVDVSCFKCKGKGCNVCKHTGWIEILGAGMVHPNVLEMAGFDSNEYSGFAFGMGPDRIAMLKYGIEDIRHFYTNDVRFLNQFKAVEDRGEA persistent 352 pheS phenylalanine--tRNA ligase subunit alpha 6.1.1.20 GO:0000049,GO:0000166,GO:0000287,GO:0004826,GO:0005524,GO:0005737,GO:0006432,GO:0016740 COG0016,J WP_017175722.1 UPI000300BB4A UniRef100_A0A1L8YA45,UniRef50_Q4L5E3,UniRef90_Q4L5E3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 222989 223729 . - . GCA_005502385.1_01199_gene GCA_005502385.1_01199 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEQITSTQNNKIKLANKLKKKKERDKTGLALIEGIHLIDEAFKSNMMIKQLFVIEPERTDSRLLEYAKEAYEINMKVAESLSGTITPQGFFAVIEKPKHDISKAKQVLLLDRIQDPGNLGTLIRTADAAGIDMIVMEKGTADAYQDKVMRASQGSVFHIPIVTTELNKFIEQFDGPVYGTALENAVSYKNIESQDTFALLLGNEGEGVNKELLAHTSQNLIIPIYGKAESLNVAIAGSILLYHLKG . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 222989 223729 . - . GCA_005502385.1_01199_mRNA GCA_005502385.1_01199 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEQITSTQNNKIKLANKLKKKKERDKTGLALIEGIHLIDEAFKSNMMIKQLFVIEPERTDSRLLEYAKEAYEINMKVAESLSGTITPQGFFAVIEKPKHDISKAKQVLLLDRIQDPGNLGTLIRTADAAGIDMIVMEKGTADAYQDKVMRASQGSVFHIPIVTTELNKFIEQFDGPVYGTALENAVSYKNIESQDTFALLLGNEGEGVNKELLAHTSQNLIIPIYGKAESLNVAIAGSILLYHLKG . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 222989 223729 . - 0 GCA_005502385.1_01199 GCA_005502385.1_01199_gene,GCA_005502385.1_01199_mRNA GCA_005502385.1_01199 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEQITSTQNNKIKLANKLKKKKERDKTGLALIEGIHLIDEAFKSNMMIKQLFVIEPERTDSRLLEYAKEAYEINMKVAESLSGTITPQGFFAVIEKPKHDISKAKQVLLLDRIQDPGNLGTLIRTADAAGIDMIVMEKGTADAYQDKVMRASQGSVFHIPIVTTELNKFIEQFDGPVYGTALENAVSYKNIESQDTFALLLGNEGEGVNKELLAHTSQNLIIPIYGKAESLNVAIAGSILLYHLKG persistent 246 RNA methyltransferase WP_017175723.1 UPI0002DD6470 UniRef100_A0A4Q9WUU7,UniRef50_A0A098H324,UniRef90_A0A6B8S9C0 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 223845 224018 . - . GCA_005502385.1_01200_gene GCA_005502385.1_01200 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAVPKRRTSKTRKNKRRTHFKISVPGMTECPNCGEYKLSHRVCKNCGSYNGEEVVSK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 223845 224018 . - . GCA_005502385.1_01200_mRNA GCA_005502385.1_01200 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAVPKRRTSKTRKNKRRTHFKISVPGMTECPNCGEYKLSHRVCKNCGSYNGEEVVSK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 223845 224018 . - 0 GCA_005502385.1_01200 GCA_005502385.1_01200_gene,GCA_005502385.1_01200_mRNA GCA_005502385.1_01200 50S ribosomal protein L32 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAVPKRRTSKTRKNKRRTHFKISVPGMTECPNCGEYKLSHRVCKNCGSYNGEEVVSK persistent 57 rpmF 50S ribosomal protein L32 GO:0003735,GO:0006412,GO:0015934 COG0333,J WP_001830121.1 UPI00000E4DEF UniRef100_Q5HQ39,UniRef50_B7JC05,UniRef90_Q5HQ39 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 224103 224657 . - . GCA_005502385.1_01201_gene GCA_005502385.1_01201 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKWSITQLRKYQGKPFEFNEKANFDDLIEPLGLIDLSEMNIEGELTIKSNEVIADMHVTGTYTMPCARTLVPVDVPLDVRTSEIFDLEGYNSYTDEEVDEDEHYHLATDGMINIRDIAKELVIIEKPMRAFSENSDQMLTEGNGWEVIDEEQALELEHSKDNDDSQTRQVDPRLQKLQQLYDKE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 224103 224657 . - . GCA_005502385.1_01201_mRNA GCA_005502385.1_01201 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKWSITQLRKYQGKPFEFNEKANFDDLIEPLGLIDLSEMNIEGELTIKSNEVIADMHVTGTYTMPCARTLVPVDVPLDVRTSEIFDLEGYNSYTDEEVDEDEHYHLATDGMINIRDIAKELVIIEKPMRAFSENSDQMLTEGNGWEVIDEEQALELEHSKDNDDSQTRQVDPRLQKLQQLYDKE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 224103 224657 . - 0 GCA_005502385.1_01201 GCA_005502385.1_01201_gene,GCA_005502385.1_01201_mRNA GCA_005502385.1_01201 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKWSITQLRKYQGKPFEFNEKANFDDLIEPLGLIDLSEMNIEGELTIKSNEVIADMHVTGTYTMPCARTLVPVDVPLDVRTSEIFDLEGYNSYTDEEVDEDEHYHLATDGMINIRDIAKELVIIEKPMRAFSENSDQMLTEGNGWEVIDEEQALELEHSKDNDDSQTRQVDPRLQKLQQLYDKE persistent 184 DUF177 domain-containing protein WP_017175724.1 UPI0002D3CE4F UniRef100_A0A4Q9WTU9,UniRef50_Q2FZF3,UniRef90_A0A4Q9WTU9 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 224784 225923 . + . GCA_005502385.1_01202_gene GCA_005502385.1_01202 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKSVGLITEYNPFHNGHAYHAQQAKVQSDAEISIAIMSGNFVMRGEPAIYNKFLRTQMALSNVDLVVELPLIASLSSSDYFAQIAVQVARYLDVNTIAFGSETPDITRLKNVANEIINLEHSSTFNQKVKEGSNYAKIINDLISDNTLLKMPNNILAITYLKAIQQFAPHMKGLAIQRVHAHHHDATIETSSFASGSAIRQSLITQETQWTTVVPSSIQSLYTTPHLTKEDTFSLIKYHILSHSIHEMAHIYTISEGLEHRLKKYINQATSFESFMSLLKTKRFTYTHLQRILMQILLNVKKEDSIQSISAVRILGMNRRGQSYLKQLKTKFPERQFITNINKTSAHFFKNEIKSTDIYNLLSGQQKNDFNTPVIRLNN . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 224784 225923 . + . GCA_005502385.1_01202_mRNA GCA_005502385.1_01202 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKSVGLITEYNPFHNGHAYHAQQAKVQSDAEISIAIMSGNFVMRGEPAIYNKFLRTQMALSNVDLVVELPLIASLSSSDYFAQIAVQVARYLDVNTIAFGSETPDITRLKNVANEIINLEHSSTFNQKVKEGSNYAKIINDLISDNTLLKMPNNILAITYLKAIQQFAPHMKGLAIQRVHAHHHDATIETSSFASGSAIRQSLITQETQWTTVVPSSIQSLYTTPHLTKEDTFSLIKYHILSHSIHEMAHIYTISEGLEHRLKKYINQATSFESFMSLLKTKRFTYTHLQRILMQILLNVKKEDSIQSISAVRILGMNRRGQSYLKQLKTKFPERQFITNINKTSAHFFKNEIKSTDIYNLLSGQQKNDFNTPVIRLNN . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 224784 225923 . + 0 GCA_005502385.1_01202 GCA_005502385.1_01202_gene,GCA_005502385.1_01202_mRNA GCA_005502385.1_01202 tRNA(Met) cytidine acetate ligase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKSVGLITEYNPFHNGHAYHAQQAKVQSDAEISIAIMSGNFVMRGEPAIYNKFLRTQMALSNVDLVVELPLIASLSSSDYFAQIAVQVARYLDVNTIAFGSETPDITRLKNVANEIINLEHSSTFNQKVKEGSNYAKIINDLISDNTLLKMPNNILAITYLKAIQQFAPHMKGLAIQRVHAHHHDATIETSSFASGSAIRQSLITQETQWTTVVPSSIQSLYTTPHLTKEDTFSLIKYHILSHSIHEMAHIYTISEGLEHRLKKYINQATSFESFMSLLKTKRFTYTHLQRILMQILLNVKKEDSIQSISAVRILGMNRRGQSYLKQLKTKFPERQFITNINKTSAHFFKNEIKSTDIYNLLSGQQKNDFNTPVIRLNN persistent 379 nucleotidyltransferase 6.3.1.22 WP_019835747.1 UPI00035E686B UniRef100_UPI00035E686B,UniRef50_Q2FZF4,UniRef90_A0A3S7GTB5 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 225970 226455 . - . GCA_005502385.1_01203_gene GCA_005502385.1_01203 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTKTKAVIPGSFDPITYGHLDIIERSSDRFDELHVCILKNSSKAGTFSIEERMELIRESVKHLPNVKVHNFNGLLVDFCDKIGAKTIIRGLRAVSDFEYELRLTSMNKKLNSNVETMYMMTSTNYSFISSSVVKEVAQYKADISDFVPRHVERALKEKFED . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 225970 226455 . - . GCA_005502385.1_01203_mRNA GCA_005502385.1_01203 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTKTKAVIPGSFDPITYGHLDIIERSSDRFDELHVCILKNSSKAGTFSIEERMELIRESVKHLPNVKVHNFNGLLVDFCDKIGAKTIIRGLRAVSDFEYELRLTSMNKKLNSNVETMYMMTSTNYSFISSSVVKEVAQYKADISDFVPRHVERALKEKFED . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 225970 226455 . - 0 GCA_005502385.1_01203 GCA_005502385.1_01203_gene,GCA_005502385.1_01203_mRNA GCA_005502385.1_01203 Phosphopantetheine adenylyltransferase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTKTKAVIPGSFDPITYGHLDIIERSSDRFDELHVCILKNSSKAGTFSIEERMELIRESVKHLPNVKVHNFNGLLVDFCDKIGAKTIIRGLRAVSDFEYELRLTSMNKKLNSNVETMYMMTSTNYSFISSSVVKEVAQYKADISDFVPRHVERALKEKFED persistent 161 coaD pantetheine-phosphate adenylyltransferase 2.7.7.3 GO:0004595,GO:0005524,GO:0005737,GO:0015937 COG0669,H WP_017175726.1 UPI0003062AB8 UniRef100_A0A4Q9WSR4,UniRef50_Q2FZF5,UniRef90_Q4L5D8 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 226448 226999 . - . GCA_005502385.1_01204_gene GCA_005502385.1_01204 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRVIAGKHKSKPLESLEGRNTRPTMDKVKEGIFNSLHEVYGLGLDLFAGSGALGIEALSRGMDKVIFVDQNFKAVKVIQANLKQLNLEEQSEVYKNNADRALKAINKRDIQFDFIFLDPPYNKGLIDKALDQISKFNLLKEHGIIICEFSNQEKINTYDFEVIKQYHYGLTDTLLLKKGEHND . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 226448 226999 . - . GCA_005502385.1_01204_mRNA GCA_005502385.1_01204 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRVIAGKHKSKPLESLEGRNTRPTMDKVKEGIFNSLHEVYGLGLDLFAGSGALGIEALSRGMDKVIFVDQNFKAVKVIQANLKQLNLEEQSEVYKNNADRALKAINKRDIQFDFIFLDPPYNKGLIDKALDQISKFNLLKEHGIIICEFSNQEKINTYDFEVIKQYHYGLTDTLLLKKGEHND . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 226448 226999 . - 0 GCA_005502385.1_01204 GCA_005502385.1_01204_gene,GCA_005502385.1_01204_mRNA GCA_005502385.1_01204 Ribosomal RNA small subunit methyltransferase D GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRVIAGKHKSKPLESLEGRNTRPTMDKVKEGIFNSLHEVYGLGLDLFAGSGALGIEALSRGMDKVIFVDQNFKAVKVIQANLKQLNLEEQSEVYKNNADRALKAINKRDIQFDFIFLDPPYNKGLIDKALDQISKFNLLKEHGIIICEFSNQEKINTYDFEVIKQYHYGLTDTLLLKKGEHND persistent 183 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2.1.1.171 GO:0031167,GO:0052913 WP_002450015.1 UPI00019FB184 UniRef100_A0A4Q9WVH8,UniRef50_A0A9N8IIV2,UniRef90_A0A4Q9WVH8 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 227070 227459 . + . GCA_005502385.1_01205_gene GCA_005502385.1_01205 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKQSFIILGEGLTDLFEFLTLIEYNHARIDKVVYFHTPQSDKQLSSVAIIMNPTTGKQFQAIYMMLNALKYPYPNSNKKFEMINEQAQSYDIPIVGIDVQPPNAFHTNDLYFKYLISVLRLQNWIPPMQ . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 227070 227459 . + . GCA_005502385.1_01205_mRNA GCA_005502385.1_01205 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKQSFIILGEGLTDLFEFLTLIEYNHARIDKVVYFHTPQSDKQLSSVAIIMNPTTGKQFQAIYMMLNALKYPYPNSNKKFEMINEQAQSYDIPIVGIDVQPPNAFHTNDLYFKYLISVLRLQNWIPPMQ . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 227070 227459 . + 0 GCA_005502385.1_01205 GCA_005502385.1_01205_gene,GCA_005502385.1_01205_mRNA GCA_005502385.1_01205 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKQSFIILGEGLTDLFEFLTLIEYNHARIDKVVYFHTPQSDKQLSSVAIIMNPTTGKQFQAIYMMLNALKYPYPNSNKKFEMINEQAQSYDIPIVGIDVQPPNAFHTNDLYFKYLISVLRLQNWIPPMQ persistent 129 Phage protein WP_019835748.1 UPI000363F254 UniRef100_UPI000363F254,UniRef50_B9DPZ2,UniRef90_A0A974KX56 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 227477 227728 . - . GCA_005502385.1_01206_gene GCA_005502385.1_01206 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MELIPRVSLIIYLKHIKHERQIRKYGHIVYTNKPRKYVVMYVNEHEVDDILQKLMKLKYVLHIDGSPYKNLKKTYDKEKHEKL . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 227477 227728 . - . GCA_005502385.1_01206_mRNA GCA_005502385.1_01206 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MELIPRVSLIIYLKHIKHERQIRKYGHIVYTNKPRKYVVMYVNEHEVDDILQKLMKLKYVLHIDGSPYKNLKKTYDKEKHEKL . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 227477 227728 . - 0 GCA_005502385.1_01206 GCA_005502385.1_01206_gene,GCA_005502385.1_01206_mRNA GCA_005502385.1_01206 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MELIPRVSLIIYLKHIKHERQIRKYGHIVYTNKPRKYVVMYVNEHEVDDILQKLMKLKYVLHIDGSPYKNLKKTYDKEKHEKL persistent 83 DUF2129 domain-containing protein WP_017175728.1 UPI000317825A UniRef100_A0A4V2KXF7,UniRef50_Q2FZF8,UniRef90_A0A4V2KXF7 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 227873 228808 . + . GCA_005502385.1_01207_gene GCA_005502385.1_01207 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKHIKKNFFNLGITSMGILSSLLLLKRNQKPKMLKDIPYFFNGPAPYIFAHRGGMSVRPEQTQLAFDNAVDYGLDGFETDVRLTKDEELIVFHDATVDRTTNGSGKVCDYTLKELKKLDAGFHFTDINGRHIYRGHQQAKILTFDELLEMYPSKYINVDLKDTPSSYEGAIAPKKMYDIIKHHHAEKRVLVTSFHKKQNERFRAISNGEIATGASQHEVTEGVIKFILGLGYHYHPQADTFQMPIKFKGIPLSSTHFIQWLNLLNIVPGYYGINSVDLMYDLYQKGVHTIVTDRPDLGKQFKSLLKQHTSN . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 227873 228808 . + . GCA_005502385.1_01207_mRNA GCA_005502385.1_01207 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKHIKKNFFNLGITSMGILSSLLLLKRNQKPKMLKDIPYFFNGPAPYIFAHRGGMSVRPEQTQLAFDNAVDYGLDGFETDVRLTKDEELIVFHDATVDRTTNGSGKVCDYTLKELKKLDAGFHFTDINGRHIYRGHQQAKILTFDELLEMYPSKYINVDLKDTPSSYEGAIAPKKMYDIIKHHHAEKRVLVTSFHKKQNERFRAISNGEIATGASQHEVTEGVIKFILGLGYHYHPQADTFQMPIKFKGIPLSSTHFIQWLNLLNIVPGYYGINSVDLMYDLYQKGVHTIVTDRPDLGKQFKSLLKQHTSN . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 227873 228808 . + 0 GCA_005502385.1_01207 GCA_005502385.1_01207_gene,GCA_005502385.1_01207_mRNA GCA_005502385.1_01207 hypothetical protein """""" GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKHIKKNFFNLGITSMGILSSLLLLKRNQKPKMLKDIPYFFNGPAPYIFAHRGGMSVRPEQTQLAFDNAVDYGLDGFETDVRLTKDEELIVFHDATVDRTTNGSGKVCDYTLKELKKLDAGFHFTDINGRHIYRGHQQAKILTFDELLEMYPSKYINVDLKDTPSSYEGAIAPKKMYDIIKHHHAEKRVLVTSFHKKQNERFRAISNGEIATGASQHEVTEGVIKFILGLGYHYHPQADTFQMPIKFKGIPLSSTHFIQWLNLLNIVPGYYGINSVDLMYDLYQKGVHTIVTDRPDLGKQFKSLLKQHTSN persistent 311 Glycerophosphodiester phosphodiesterase 3.1.4.46 WP_017175729.1 UPI0002E6A9AC UniRef100_A0A4Q9WSR1,UniRef50_A0A3A3AIN7,UniRef90_A0AAE5JLL5 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 228976 229410 . - . GCA_005502385.1_01208_gene GCA_005502385.1_01208 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MYTEETLSILDEIEDLSDMIVQSKVYFNYREAQKTLKQDDEAHLLYQAFLKSKERYDEVMRFGRYHPDYQNVMLDTRRRKRAYEMLPNVMDYKSKEVQLQNLIDEVLTTIALSVSENVKIEVGNPFFKTDSKGCASGGTCNCRL . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 228976 229410 . - . GCA_005502385.1_01208_mRNA GCA_005502385.1_01208 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MYTEETLSILDEIEDLSDMIVQSKVYFNYREAQKTLKQDDEAHLLYQAFLKSKERYDEVMRFGRYHPDYQNVMLDTRRRKRAYEMLPNVMDYKSKEVQLQNLIDEVLTTIALSVSENVKIEVGNPFFKTDSKGCASGGTCNCRL . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 228976 229410 . - 0 GCA_005502385.1_01208 GCA_005502385.1_01208_gene,GCA_005502385.1_01208_mRNA GCA_005502385.1_01208 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MYTEETLSILDEIEDLSDMIVQSKVYFNYREAQKTLKQDDEAHLLYQAFLKSKERYDEVMRFGRYHPDYQNVMLDTRRRKRAYEMLPNVMDYKSKEVQLQNLIDEVLTTIALSVSENVKIEVGNPFFKTDSKGCASGGTCNCRL persistent 144 ylbF YlbF family regulator WP_049382517.1 UPI00066D15EA UniRef100_UPI00066D15EA,UniRef50_Q2FZG0,UniRef90_A0AAE5JJS2 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 229429 230490 . - . GCA_005502385.1_01209_gene GCA_005502385.1_01209 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTKLVIKVLGVVFLITFLIYLFYSPRLKFDVLENPNNNNKISHSNQVSHSVKKQTENPAPKNGIGTWIGKDINYLTNKYGQANRTYPVKGGYTDYIFKRKQQYYIVTTKHDEIKSVYATGEKAQTGSLKINENASHIFEKTSINPDPSFKVNGKQYNFELSDEDIKTQTLIKYGNIYAQVYVDQQSNRIMGIRYLDKELLAFIKPYQLTDEEDISDDKFNNDRNNKDSLPYEQSPNQLITLYEITNQMRDLKHIPPLKVNSDISHIASANLYEATGTEDVEFTEEALKSQLGNENIDFIATSQNVGYDFDDVPTLIHSWMNSDIHRSRMLNKKYNEMGGEVMRNYYSLIFVQK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 229429 230490 . - . GCA_005502385.1_01209_mRNA GCA_005502385.1_01209 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTKLVIKVLGVVFLITFLIYLFYSPRLKFDVLENPNNNNKISHSNQVSHSVKKQTENPAPKNGIGTWIGKDINYLTNKYGQANRTYPVKGGYTDYIFKRKQQYYIVTTKHDEIKSVYATGEKAQTGSLKINENASHIFEKTSINPDPSFKVNGKQYNFELSDEDIKTQTLIKYGNIYAQVYVDQQSNRIMGIRYLDKELLAFIKPYQLTDEEDISDDKFNNDRNNKDSLPYEQSPNQLITLYEITNQMRDLKHIPPLKVNSDISHIASANLYEATGTEDVEFTEEALKSQLGNENIDFIATSQNVGYDFDDVPTLIHSWMNSDIHRSRMLNKKYNEMGGEVMRNYYSLIFVQK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 229429 230490 . - 0 GCA_005502385.1_01209 GCA_005502385.1_01209_gene,GCA_005502385.1_01209_mRNA GCA_005502385.1_01209 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTKLVIKVLGVVFLITFLIYLFYSPRLKFDVLENPNNNNKISHSNQVSHSVKKQTENPAPKNGIGTWIGKDINYLTNKYGQANRTYPVKGGYTDYIFKRKQQYYIVTTKHDEIKSVYATGEKAQTGSLKINENASHIFEKTSINPDPSFKVNGKQYNFELSDEDIKTQTLIKYGNIYAQVYVDQQSNRIMGIRYLDKELLAFIKPYQLTDEEDISDDKFNNDRNNKDSLPYEQSPNQLITLYEITNQMRDLKHIPPLKVNSDISHIASANLYEATGTEDVEFTEEALKSQLGNENIDFIATSQNVGYDFDDVPTLIHSWMNSDIHRSRMLNKKYNEMGGEVMRNYYSLIFVQK persistent 353 CAP-associated domain-containing protein WP_049382518.1 UPI00066DF915 UniRef100_UPI00066DF915,UniRef50_Q5HQ49,UniRef90_A0A8X8GQ29 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 230736 231197 . - . GCA_005502385.1_01210_gene GCA_005502385.1_01210 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSLPILPTISTSCIVISAILVAIGWWQIAHRHVNTHKKVMLWAAFFALTFFIIYATRTIFIGNTDFGGPDSVRTYYKIFLIFHINLATIGGVLGLVQIITAFKDKFKWHRRIGPVASIIWFFTGITGVAVYLLLYVIYPGGETTSVIKATLGL . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 230736 231197 . - . GCA_005502385.1_01210_mRNA GCA_005502385.1_01210 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSLPILPTISTSCIVISAILVAIGWWQIAHRHVNTHKKVMLWAAFFALTFFIIYATRTIFIGNTDFGGPDSVRTYYKIFLIFHINLATIGGVLGLVQIITAFKDKFKWHRRIGPVASIIWFFTGITGVAVYLLLYVIYPGGETTSVIKATLGL . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 230736 231197 . - 0 GCA_005502385.1_01210 GCA_005502385.1_01210_gene,GCA_005502385.1_01210_mRNA GCA_005502385.1_01210 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSLPILPTISTSCIVISAILVAIGWWQIAHRHVNTHKKVMLWAAFFALTFFIIYATRTIFIGNTDFGGPDSVRTYYKIFLIFHINLATIGGVLGLVQIITAFKDKFKWHRRIGPVASIIWFFTGITGVAVYLLLYVIYPGGETTSVIKATLGL persistent 153 DUF420 domain-containing protein WP_017175732.1 UPI0002F631EA UniRef100_A0A4Q9WSU5,UniRef50_Q2FZG3,UniRef90_A0AAE5JKR5 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 231227 232138 . - . GCA_005502385.1_01211_gene GCA_005502385.1_01211 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKEHTLSQPSSRVSFKELQQIIKMGLVQGNLIPAFAGAWLAIVMTNHSFLSSIPQILLMLIGSTLIMGGACALNNYYDQDIDKIMPSKQSRPTVNDRISDKHLLMLSFGMMLVGEACLFLLNVPSGVLGLFGIVGYVSYYSIWSKRHTTWNTVVGSFPGAVPPLIGWTAIDGQISLVAFALFLVVFCWQPIHFYALAIKRSDEYSLANIPMLPSVKGFKRTRVSMFIWLVFLLPLPFLLSSLGTTFVVLATLLNLGWIFIGLTTFKKNTDQTKWATKMFIYSLNYLVVFFALVVVISLIKMI . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 231227 232138 . - . GCA_005502385.1_01211_mRNA GCA_005502385.1_01211 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKEHTLSQPSSRVSFKELQQIIKMGLVQGNLIPAFAGAWLAIVMTNHSFLSSIPQILLMLIGSTLIMGGACALNNYYDQDIDKIMPSKQSRPTVNDRISDKHLLMLSFGMMLVGEACLFLLNVPSGVLGLFGIVGYVSYYSIWSKRHTTWNTVVGSFPGAVPPLIGWTAIDGQISLVAFALFLVVFCWQPIHFYALAIKRSDEYSLANIPMLPSVKGFKRTRVSMFIWLVFLLPLPFLLSSLGTTFVVLATLLNLGWIFIGLTTFKKNTDQTKWATKMFIYSLNYLVVFFALVVVISLIKMI . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 231227 232138 . - 0 GCA_005502385.1_01211 GCA_005502385.1_01211_gene,GCA_005502385.1_01211_mRNA GCA_005502385.1_01211 Protoheme IX farnesyltransferase 2 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSKEHTLSQPSSRVSFKELQQIIKMGLVQGNLIPAFAGAWLAIVMTNHSFLSSIPQILLMLIGSTLIMGGACALNNYYDQDIDKIMPSKQSRPTVNDRISDKHLLMLSFGMMLVGEACLFLLNVPSGVLGLFGIVGYVSYYSIWSKRHTTWNTVVGSFPGAVPPLIGWTAIDGQISLVAFALFLVVFCWQPIHFYALAIKRSDEYSLANIPMLPSVKGFKRTRVSMFIWLVFLLPLPFLLSSLGTTFVVLATLLNLGWIFIGLTTFKKNTDQTKWATKMFIYSLNYLVVFFALVVVISLIKMI persistent 303 cyoE heme o synthase 2.5.1.141 GO:0005886,GO:0006783,GO:0008495,GO:0016020,GO:0048034 COG0109,HI WP_017175733.1 UPI000309C334 UniRef100_A0A4Q9WTV9,UniRef50_Q8CPM1,UniRef90_Q4L5D0 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 232362 233297 . + . GCA_005502385.1_01212_gene GCA_005502385.1_01212 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGCLNLFNKRNLKWLSIVATIIMALVQLGGALVTKTGSEDGCGASWPLCHGALLPQNLPIATIIELSHRAVSGLSLIVVLWLAITAWKNIGYIKEVKPLAIISVAFLLIQALIGAAAVIWQQNSYVLALHFGISLISFSSVFVLMLIIFEVDKKYEADELFIKKPLRNLTWIMTGVVYVTIYTGALVRHAKASLAYGSWPLPFNNLVPHTEQDWVQFAHRGMAFITFCWIMITFIHAIKNYSENRTIRYGYTAAFILIILQVITGALSVITHVNLIIALLHALCITILFGLIAYFILLMLRSIRSEKSKIK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 232362 233297 . + . GCA_005502385.1_01212_mRNA GCA_005502385.1_01212 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGCLNLFNKRNLKWLSIVATIIMALVQLGGALVTKTGSEDGCGASWPLCHGALLPQNLPIATIIELSHRAVSGLSLIVVLWLAITAWKNIGYIKEVKPLAIISVAFLLIQALIGAAAVIWQQNSYVLALHFGISLISFSSVFVLMLIIFEVDKKYEADELFIKKPLRNLTWIMTGVVYVTIYTGALVRHAKASLAYGSWPLPFNNLVPHTEQDWVQFAHRGMAFITFCWIMITFIHAIKNYSENRTIRYGYTAAFILIILQVITGALSVITHVNLIIALLHALCITILFGLIAYFILLMLRSIRSEKSKIK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 232362 233297 . + 0 GCA_005502385.1_01212 GCA_005502385.1_01212_gene,GCA_005502385.1_01212_mRNA GCA_005502385.1_01212 Heme A synthase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MGCLNLFNKRNLKWLSIVATIIMALVQLGGALVTKTGSEDGCGASWPLCHGALLPQNLPIATIIELSHRAVSGLSLIVVLWLAITAWKNIGYIKEVKPLAIISVAFLLIQALIGAAAVIWQQNSYVLALHFGISLISFSSVFVLMLIIFEVDKKYEADELFIKKPLRNLTWIMTGVVYVTIYTGALVRHAKASLAYGSWPLPFNNLVPHTEQDWVQFAHRGMAFITFCWIMITFIHAIKNYSENRTIRYGYTAAFILIILQVITGALSVITHVNLIIALLHALCITILFGLIAYFILLMLRSIRSEKSKIK persistent 311 Heme A synthase 1.17.99.9 UniRef50_Q2G2C0,UniRef90_A0A974KX45 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 233421 236870 . - . GCA_005502385.1_01213_gene GCA_005502385.1_01213 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNHIKKLLVANRGEIAIRIFRAATELNVQTVAIYSNEDKNSLHRYKADESYLVGKDLGPAESYLNIERIIEVAKRANVDAIHPGYGFLSENEEFARRCNEEGITFIGPHLDHLDMFGDKVKARTTAIKANLPVIPGTDGPIENFDAAKAFAKEAGFPLMIKATSGGGGKGMRIVREESELEDAFHRAKSEAQKSFGNSEVYIERYIDNPKHIEVQVIGDEYGNIVHLYERDCSVQRRHQKVVEVAPSVGLPDELRERICQSALQLMKNIKYVNAGTVEFLVSGDEFFFIEVNPRVQVEHTITEMITGIDIVKTQILVADGASLFDKRIALPPQEEIQTLGYAIQCRITTEDPTNDFMPDSGTIIAYRSSGGFGVRLDAGDGFQGAEISPYYDSLLVKLSTHAITFKQAEEKMERSLREMRIRGVKTNIPFLVNVMRNEKFRSGDYTTKFIEETPELFDIAPTLDRGTKTLEYIGNVTINGFPNVEKRTKPDYESTSIPQVSKKKIQHLYGTKQLLDEKGPSGVADWVKAQDDVLITDTTFRDAHQSLLATRVRTKDMLNIASKTAEVFKDSFSLEMWGGATFDVAYNFLKENPWERLEKLRKAIPNVLFQMLLRASNAVGYKNYPDNVIQKFVDESAKAGVDVFRIFDSLNWVDQMKVANEAVQKAGKISEGTICYTGDILNSERSNVFTLDYYVKLAKELEREGFHILAIKDMAGLLKPRAAYELVGELKAAVNLPIHLHTHDTSGNGLLTYKQAIDAGVDIIDTAIASMSGLTSQPSVNSLYYALDGFKRNMRTDIQGLEELSHYWSTVRPYYVDFESDIKSPNTEIYQHEMPGGQYSNLSQQAKSLGLGERFNEVKDMYRRVNFLFGDIVKVTPSSKVVGDMALYMVQNDLDEQSIIEQGYKLDFPESVVSYFKGEIGQPVNGFNKQLQDIILKGQQPLTERPGEYLKPVDFDEIREQLQDKNYGEVTEQDIISYVLYPKVFDQFIQTRQQYGNLSLLDTPTFFFGMRNGETVEIEIENGKRLIIKLETISEADEKGNRTIYYVMNGQARRITIKDENIKTNANVKPKADKTNPNHIGAQMPGSVTEVKVSVGDEVKVNQPLLITEAMKMETTIQAPFNGVIKKVTVGNGDAIATGDLLIEIEKSE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 233421 236870 . - . GCA_005502385.1_01213_mRNA GCA_005502385.1_01213 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNHIKKLLVANRGEIAIRIFRAATELNVQTVAIYSNEDKNSLHRYKADESYLVGKDLGPAESYLNIERIIEVAKRANVDAIHPGYGFLSENEEFARRCNEEGITFIGPHLDHLDMFGDKVKARTTAIKANLPVIPGTDGPIENFDAAKAFAKEAGFPLMIKATSGGGGKGMRIVREESELEDAFHRAKSEAQKSFGNSEVYIERYIDNPKHIEVQVIGDEYGNIVHLYERDCSVQRRHQKVVEVAPSVGLPDELRERICQSALQLMKNIKYVNAGTVEFLVSGDEFFFIEVNPRVQVEHTITEMITGIDIVKTQILVADGASLFDKRIALPPQEEIQTLGYAIQCRITTEDPTNDFMPDSGTIIAYRSSGGFGVRLDAGDGFQGAEISPYYDSLLVKLSTHAITFKQAEEKMERSLREMRIRGVKTNIPFLVNVMRNEKFRSGDYTTKFIEETPELFDIAPTLDRGTKTLEYIGNVTINGFPNVEKRTKPDYESTSIPQVSKKKIQHLYGTKQLLDEKGPSGVADWVKAQDDVLITDTTFRDAHQSLLATRVRTKDMLNIASKTAEVFKDSFSLEMWGGATFDVAYNFLKENPWERLEKLRKAIPNVLFQMLLRASNAVGYKNYPDNVIQKFVDESAKAGVDVFRIFDSLNWVDQMKVANEAVQKAGKISEGTICYTGDILNSERSNVFTLDYYVKLAKELEREGFHILAIKDMAGLLKPRAAYELVGELKAAVNLPIHLHTHDTSGNGLLTYKQAIDAGVDIIDTAIASMSGLTSQPSVNSLYYALDGFKRNMRTDIQGLEELSHYWSTVRPYYVDFESDIKSPNTEIYQHEMPGGQYSNLSQQAKSLGLGERFNEVKDMYRRVNFLFGDIVKVTPSSKVVGDMALYMVQNDLDEQSIIEQGYKLDFPESVVSYFKGEIGQPVNGFNKQLQDIILKGQQPLTERPGEYLKPVDFDEIREQLQDKNYGEVTEQDIISYVLYPKVFDQFIQTRQQYGNLSLLDTPTFFFGMRNGETVEIEIENGKRLIIKLETISEADEKGNRTIYYVMNGQARRITIKDENIKTNANVKPKADKTNPNHIGAQMPGSVTEVKVSVGDEVKVNQPLLITEAMKMETTIQAPFNGVIKKVTVGNGDAIATGDLLIEIEKSE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 233421 236870 . - 0 GCA_005502385.1_01213 GCA_005502385.1_01213_gene,GCA_005502385.1_01213_mRNA GCA_005502385.1_01213 Pyruvate carboxylase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNHIKKLLVANRGEIAIRIFRAATELNVQTVAIYSNEDKNSLHRYKADESYLVGKDLGPAESYLNIERIIEVAKRANVDAIHPGYGFLSENEEFARRCNEEGITFIGPHLDHLDMFGDKVKARTTAIKANLPVIPGTDGPIENFDAAKAFAKEAGFPLMIKATSGGGGKGMRIVREESELEDAFHRAKSEAQKSFGNSEVYIERYIDNPKHIEVQVIGDEYGNIVHLYERDCSVQRRHQKVVEVAPSVGLPDELRERICQSALQLMKNIKYVNAGTVEFLVSGDEFFFIEVNPRVQVEHTITEMITGIDIVKTQILVADGASLFDKRIALPPQEEIQTLGYAIQCRITTEDPTNDFMPDSGTIIAYRSSGGFGVRLDAGDGFQGAEISPYYDSLLVKLSTHAITFKQAEEKMERSLREMRIRGVKTNIPFLVNVMRNEKFRSGDYTTKFIEETPELFDIAPTLDRGTKTLEYIGNVTINGFPNVEKRTKPDYESTSIPQVSKKKIQHLYGTKQLLDEKGPSGVADWVKAQDDVLITDTTFRDAHQSLLATRVRTKDMLNIASKTAEVFKDSFSLEMWGGATFDVAYNFLKENPWERLEKLRKAIPNVLFQMLLRASNAVGYKNYPDNVIQKFVDESAKAGVDVFRIFDSLNWVDQMKVANEAVQKAGKISEGTICYTGDILNSERSNVFTLDYYVKLAKELEREGFHILAIKDMAGLLKPRAAYELVGELKAAVNLPIHLHTHDTSGNGLLTYKQAIDAGVDIIDTAIASMSGLTSQPSVNSLYYALDGFKRNMRTDIQGLEELSHYWSTVRPYYVDFESDIKSPNTEIYQHEMPGGQYSNLSQQAKSLGLGERFNEVKDMYRRVNFLFGDIVKVTPSSKVVGDMALYMVQNDLDEQSIIEQGYKLDFPESVVSYFKGEIGQPVNGFNKQLQDIILKGQQPLTERPGEYLKPVDFDEIREQLQDKNYGEVTEQDIISYVLYPKVFDQFIQTRQQYGNLSLLDTPTFFFGMRNGETVEIEIENGKRLIIKLETISEADEKGNRTIYYVMNGQARRITIKDENIKTNANVKPKADKTNPNHIGAQMPGSVTEVKVSVGDEVKVNQPLLITEAMKMETTIQAPFNGVIKKVTVGNGDAIATGDLLIEIEKSE persistent 1149 pycA pyruvate carboxylase 6.4.1.1 GO:0004736,GO:0005524,GO:0006090,GO:0006094,GO:0009374,GO:0046872 C,COG1038 WP_048682800.1 UPI000660A071 UniRef100_UPI000660A071,UniRef50_A0A0H3JRU9,UniRef90_Q4L5C8 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 237206 238438 . - . GCA_005502385.1_01214_gene GCA_005502385.1_01214 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNNLKNIFRYIGRTSKFIDYPLLISYVILCFIGLVMVYSASMVAATKGTLTGGVEVSGTYFYNRQLIYVIMSFIIVFFISFMMNIKVFKQSKVQQWIMIIIFVLLFLTLLVGKNINGSKSWLDLGFMNLQASELLKIALILYISYVLSKKLPQLRGNLRIIKGPIILIILCLGLVLLQGDIGQTLLTLIIILAMFLFVGIGAKKIVKGPILYIILGFILIAGFFIFTGMMPEYLKARFSTIYDPFSSSSGTGYHLSNSLMAIGNGGLFGRGLGNGIMKLGYLPEAHTDFIFAVICEELGLIGALLVIGLLFFIVFRAFILATKTSSYFYKLICVGVASYIGSQTFVNLGGISATIPLTGVPLPFISFGGSSMISLSIAMGLLLLVARQIKVEEKRAIKNKKTKVDIPRQY . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 237206 238438 . - . GCA_005502385.1_01214_mRNA GCA_005502385.1_01214 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNNLKNIFRYIGRTSKFIDYPLLISYVILCFIGLVMVYSASMVAATKGTLTGGVEVSGTYFYNRQLIYVIMSFIIVFFISFMMNIKVFKQSKVQQWIMIIIFVLLFLTLLVGKNINGSKSWLDLGFMNLQASELLKIALILYISYVLSKKLPQLRGNLRIIKGPIILIILCLGLVLLQGDIGQTLLTLIIILAMFLFVGIGAKKIVKGPILYIILGFILIAGFFIFTGMMPEYLKARFSTIYDPFSSSSGTGYHLSNSLMAIGNGGLFGRGLGNGIMKLGYLPEAHTDFIFAVICEELGLIGALLVIGLLFFIVFRAFILATKTSSYFYKLICVGVASYIGSQTFVNLGGISATIPLTGVPLPFISFGGSSMISLSIAMGLLLLVARQIKVEEKRAIKNKKTKVDIPRQY . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 237206 238438 . - 0 GCA_005502385.1_01214 GCA_005502385.1_01214_gene,GCA_005502385.1_01214_mRNA GCA_005502385.1_01214 putative peptidoglycan glycosyltransferase FtsW GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNNLKNIFRYIGRTSKFIDYPLLISYVILCFIGLVMVYSASMVAATKGTLTGGVEVSGTYFYNRQLIYVIMSFIIVFFISFMMNIKVFKQSKVQQWIMIIIFVLLFLTLLVGKNINGSKSWLDLGFMNLQASELLKIALILYISYVLSKKLPQLRGNLRIIKGPIILIILCLGLVLLQGDIGQTLLTLIIILAMFLFVGIGAKKIVKGPILYIILGFILIAGFFIFTGMMPEYLKARFSTIYDPFSSSSGTGYHLSNSLMAIGNGGLFGRGLGNGIMKLGYLPEAHTDFIFAVICEELGLIGALLVIGLLFFIVFRAFILATKTSSYFYKLICVGVASYIGSQTFVNLGGISATIPLTGVPLPFISFGGSSMISLSIAMGLLLLVARQIKVEEKRAIKNKKTKVDIPRQY persistent 410 ftsW putative peptidoglycan glycosyltransferase FtsW WP_017175736.1 UPI00031EE25F UniRef100_A0A8X8GKD0,UniRef50_A0AAE8PBF8,UniRef90_A0A8X8GKD0 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 238683 238958 . - . GCA_005502385.1_01215_gene GCA_005502385.1_01215 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPKQMNINSAAYEQLNQDADRILHLIKVQMDNLTMPSCPLYEEVLDTQMFGLQKEVDFAVKLGLVDKEDGKNLMLRLEKELSKLHEAFTNV . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 238683 238958 . - . GCA_005502385.1_01215_mRNA GCA_005502385.1_01215 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPKQMNINSAAYEQLNQDADRILHLIKVQMDNLTMPSCPLYEEVLDTQMFGLQKEVDFAVKLGLVDKEDGKNLMLRLEKELSKLHEAFTNV . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 238683 238958 . - 0 GCA_005502385.1_01215 GCA_005502385.1_01215_gene,GCA_005502385.1_01215_mRNA GCA_005502385.1_01215 hypothetical protein UPF0358 protein MW0995 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MPKQMNINSAAYEQLNQDADRILHLIKVQMDNLTMPSCPLYEEVLDTQMFGLQKEVDFAVKLGLVDKEDGKNLMLRLEKELSKLHEAFTNV persistent 91 UPF0358 protein FOB69_08800 WP_017175737.1 UPI0003100F1C UniRef100_A0A4Q9WTL4,UniRef50_Q49WN7,UniRef90_A0A657M747 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 239097 239582 . + . GCA_005502385.1_01216_gene GCA_005502385.1_01216 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MIQIKGDVKFPITLDSTTWIFDDRKVKIEDIENGIFEGTKPIKFEDNREWNRAILEGQTNPPTLNSEIKYRKRAVLEDSFAINMTPFFKNAEPLESATTIKLSNDTSSIEIPLELLPYLFFQFAKDGKRLYDDNSVDSFVYNPEENAYSYHFKYVTRIEVI . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 239097 239582 . + . GCA_005502385.1_01216_mRNA GCA_005502385.1_01216 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MIQIKGDVKFPITLDSTTWIFDDRKVKIEDIENGIFEGTKPIKFEDNREWNRAILEGQTNPPTLNSEIKYRKRAVLEDSFAINMTPFFKNAEPLESATTIKLSNDTSSIEIPLELLPYLFFQFAKDGKRLYDDNSVDSFVYNPEENAYSYHFKYVTRIEVI . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 239097 239582 . + 0 GCA_005502385.1_01216 GCA_005502385.1_01216_gene,GCA_005502385.1_01216_mRNA GCA_005502385.1_01216 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MIQIKGDVKFPITLDSTTWIFDDRKVKIEDIENGIFEGTKPIKFEDNREWNRAILEGQTNPPTLNSEIKYRKRAVLEDSFAINMTPFFKNAEPLESATTIKLSNDTSSIEIPLELLPYLFFQFAKDGKRLYDDNSVDSFVYNPEENAYSYHFKYVTRIEVI persistent 161 Phage tail protein WP_017175738.1 UPI0002E014BB UniRef100_A0A4V2KXF6,UniRef50_B9DPZ4,UniRef90_A0A974QN58 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 239584 239778 . + . GCA_005502385.1_01217_gene GCA_005502385.1_01217 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MREVQCIICDTKVLIDERTVEAKRLRNNPIKTFMCSDCKSRLDTPRQRPNENRKFNLHFPNENL . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 239584 239778 . + . GCA_005502385.1_01217_mRNA GCA_005502385.1_01217 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MREVQCIICDTKVLIDERTVEAKRLRNNPIKTFMCSDCKSRLDTPRQRPNENRKFNLHFPNENL . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 239584 239778 . + 0 GCA_005502385.1_01217 GCA_005502385.1_01217_gene,GCA_005502385.1_01217_mRNA GCA_005502385.1_01217 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MREVQCIICDTKVLIDERTVEAKRLRNNPIKTFMCSDCKSRLDTPRQRPNENRKFNLHFPNENL persistent 64 DUF2197 domain-containing protein WP_002449988.1 UPI00019FB191 UniRef100_A0A1L8YA54,UniRef50_A0A1S1GS17,UniRef90_A0A1L8YA54 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 239840 241684 . - . GCA_005502385.1_01218_gene GCA_005502385.1_01218 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTNRREDVRNIAIIAHVDHGKTTLVDELLKQSGIFRENEHVDERAMDSNDLERERGITILAKNTAINYKGTRINILDTPGHADFGGEVERIMKMVDGVVLVVDAYEGTMPQTRFVLKKALEQNLKPVVVVNKIDKPSARPEAVVDEVLDLFIELEANDEQLDFPVVYASSVNGTASLDPEKQDENMQSLYETILDYVPAPIDNSDEPLQFQVALLDYNDYVGRIGIGRVFRGKMRVGDNVSLIKLDGTVKNFRVTKIFGFFGLKREEIEEAQAGDLIAVSGMEDINVGETVTPHDHQEALPVLRIDEPTLEMTFKVNNSPFAGREGDFVTARQIQERLDQQLETDVSLKVTPTDSPDTWIVAGRGELHLSILIENMRREGFELQVSKPQVILREIDGVLSEPFERVQCEVPSENAGAVIESLGARKGEMLDMLTTDNGLTRLIFMVPARGMIGYTTEFMSMTRGYGIINHTFEEFRPRVKAQIGGRRNGALISMDQGQATAYAIIGLEDRGVNFMEPGTEVYEGMIVGEHNRENDLTVNITKAKHQTNVRSATKDQTQTMNRPRILTLEEALEYINDDELVEVTPQSIRLRKKILNKAAREKEAKRVKQMMQDQ . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 239840 241684 . - . GCA_005502385.1_01218_mRNA GCA_005502385.1_01218 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTNRREDVRNIAIIAHVDHGKTTLVDELLKQSGIFRENEHVDERAMDSNDLERERGITILAKNTAINYKGTRINILDTPGHADFGGEVERIMKMVDGVVLVVDAYEGTMPQTRFVLKKALEQNLKPVVVVNKIDKPSARPEAVVDEVLDLFIELEANDEQLDFPVVYASSVNGTASLDPEKQDENMQSLYETILDYVPAPIDNSDEPLQFQVALLDYNDYVGRIGIGRVFRGKMRVGDNVSLIKLDGTVKNFRVTKIFGFFGLKREEIEEAQAGDLIAVSGMEDINVGETVTPHDHQEALPVLRIDEPTLEMTFKVNNSPFAGREGDFVTARQIQERLDQQLETDVSLKVTPTDSPDTWIVAGRGELHLSILIENMRREGFELQVSKPQVILREIDGVLSEPFERVQCEVPSENAGAVIESLGARKGEMLDMLTTDNGLTRLIFMVPARGMIGYTTEFMSMTRGYGIINHTFEEFRPRVKAQIGGRRNGALISMDQGQATAYAIIGLEDRGVNFMEPGTEVYEGMIVGEHNRENDLTVNITKAKHQTNVRSATKDQTQTMNRPRILTLEEALEYINDDELVEVTPQSIRLRKKILNKAAREKEAKRVKQMMQDQ . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 239840 241684 . - 0 GCA_005502385.1_01218 GCA_005502385.1_01218_gene,GCA_005502385.1_01218_mRNA GCA_005502385.1_01218 GTP-binding protein TypA/BipA GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTNRREDVRNIAIIAHVDHGKTTLVDELLKQSGIFRENEHVDERAMDSNDLERERGITILAKNTAINYKGTRINILDTPGHADFGGEVERIMKMVDGVVLVVDAYEGTMPQTRFVLKKALEQNLKPVVVVNKIDKPSARPEAVVDEVLDLFIELEANDEQLDFPVVYASSVNGTASLDPEKQDENMQSLYETILDYVPAPIDNSDEPLQFQVALLDYNDYVGRIGIGRVFRGKMRVGDNVSLIKLDGTVKNFRVTKIFGFFGLKREEIEEAQAGDLIAVSGMEDINVGETVTPHDHQEALPVLRIDEPTLEMTFKVNNSPFAGREGDFVTARQIQERLDQQLETDVSLKVTPTDSPDTWIVAGRGELHLSILIENMRREGFELQVSKPQVILREIDGVLSEPFERVQCEVPSENAGAVIESLGARKGEMLDMLTTDNGLTRLIFMVPARGMIGYTTEFMSMTRGYGIINHTFEEFRPRVKAQIGGRRNGALISMDQGQATAYAIIGLEDRGVNFMEPGTEVYEGMIVGEHNRENDLTVNITKAKHQTNVRSATKDQTQTMNRPRILTLEEALEYINDDELVEVTPQSIRLRKKILNKAAREKEAKRVKQMMQDQ persistent 614 typA translational GTPase TypA GO:0003924,GO:0005525,GO:0006412,GO:0006950 COG1217,T WP_137689574.1 UPI0010F56865 UniRef100_UPI0010F56865,UniRef50_A0A0R2DHU7,UniRef90_A0A2A1K7F6 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 241783 241974 . + . GCA_005502385.1_01219_gene GCA_005502385.1_01219 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEKPKSKGIFWILSIVAVIFLVLFSFSVGAGSIPMMILTFILFIATFGAGFTLKKKYRENNWL . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 241783 241974 . + . GCA_005502385.1_01219_mRNA GCA_005502385.1_01219 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEKPKSKGIFWILSIVAVIFLVLFSFSVGAGSIPMMILTFILFIATFGAGFTLKKKYRENNWL . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 241783 241974 . + 0 GCA_005502385.1_01219 GCA_005502385.1_01219_gene,GCA_005502385.1_01219_mRNA GCA_005502385.1_01219 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEKPKSKGIFWILSIVAVIFLVLFSFSVGAGSIPMMILTFILFIATFGAGFTLKKKYRENNWL persistent 63 ylaF YlaF family protein WP_002448174.1 UPI00019FC960 UniRef100_A0A1L8Y442,UniRef50_K9ANU3,UniRef90_A0A2A1KCG2 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 242043 242858 . - . GCA_005502385.1_01220_gene GCA_005502385.1_01220 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSLYDFAKGLVLEAGNKVRIMMKEELNIETKSNPNDLVTNVDKATENYIYDAITHSYPEHRVIGEEGHGHDLTHVEGVVWVVDPIDGTLNFVHQKENFAISIGIYRNGKPYAGFVYDVMKDVLYHAKVGEGAFENKHPLSTIESTTLKKSLIGINPNWVTKPKMGPIFQDIVNDARSCRAYGSAALEIISVAKGQLAAYITPRLQPWDFAGGLIVLNEVGGVASNLLGEPLNISSANSVLVGNSNIHKEILEIYLAPNTATLIDLHQRFKK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 242043 242858 . - . GCA_005502385.1_01220_mRNA GCA_005502385.1_01220 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSLYDFAKGLVLEAGNKVRIMMKEELNIETKSNPNDLVTNVDKATENYIYDAITHSYPEHRVIGEEGHGHDLTHVEGVVWVVDPIDGTLNFVHQKENFAISIGIYRNGKPYAGFVYDVMKDVLYHAKVGEGAFENKHPLSTIESTTLKKSLIGINPNWVTKPKMGPIFQDIVNDARSCRAYGSAALEIISVAKGQLAAYITPRLQPWDFAGGLIVLNEVGGVASNLLGEPLNISSANSVLVGNSNIHKEILEIYLAPNTATLIDLHQRFKK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 242043 242858 . - 0 GCA_005502385.1_01220 GCA_005502385.1_01220_gene,GCA_005502385.1_01220_mRNA GCA_005502385.1_01220 Inositol-1-monophosphatase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSLYDFAKGLVLEAGNKVRIMMKEELNIETKSNPNDLVTNVDKATENYIYDAITHSYPEHRVIGEEGHGHDLTHVEGVVWVVDPIDGTLNFVHQKENFAISIGIYRNGKPYAGFVYDVMKDVLYHAKVGEGAFENKHPLSTIESTTLKKSLIGINPNWVTKPKMGPIFQDIVNDARSCRAYGSAALEIISVAKGQLAAYITPRLQPWDFAGGLIVLNEVGGVASNLLGEPLNISSANSVLVGNSNIHKEILEIYLAPNTATLIDLHQRFKK persistent 271 Inositol monophosphatase family protein 3.1.3.25 WP_002448077.1 UPI00019FC95F UniRef100_A0A4Q9WSV3,UniRef50_A0A654A156,UniRef90_A0A4Q9WSV3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 243098 243313 . - . GCA_005502385.1_01221_gene GCA_005502385.1_01221 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLFIDPKHFNKGYGTIILQSLIQEDKIQYVDVNKDNQHALKFYIKNGFKAYSESQKDNQGRDYPILHLKLA . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 243098 243313 . - . GCA_005502385.1_01221_mRNA GCA_005502385.1_01221 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLFIDPKHFNKGYGTIILQSLIQEDKIQYVDVNKDNQHALKFYIKNGFKAYSESQKDNQGRDYPILHLKLA . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 243098 243313 . - 0 GCA_005502385.1_01221 GCA_005502385.1_01221_gene,GCA_005502385.1_01221_mRNA GCA_005502385.1_01221 Peptidyl-lysine N-acetyltransferase YjaB GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLFIDPKHFNKGYGTIILQSLIQEDKIQYVDVNKDNQHALKFYIKNGFKAYSESQKDNQGRDYPILHLKLA shell 71 GNAT family N-acetyltransferase WP_017175740.1 UPI000306F111 UniRef100_A0A8X8KHE3,UniRef50_A0A2A1KA50,UniRef90_A0A8X8KHE3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 243707 244318 . + . GCA_005502385.1_01222_gene GCA_005502385.1_01222 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTQYTFTPKDFKAFDVEGLDERMEALNKYIRPQLHQLGDYFSEYFTSQTGETFYAHVAKHARRSVNPPIDTWVAFAPNKRGYKMLPHFQIGLFRDQLFIMYGIMHEGKNKEERVKVFDKHFNALKQLPNDYQISLNHMKKDKQYIKDLSDTDLHQAIDRVKNVKKGEFFIARTLAPSDERLKSDETFLAFIKETFDEFLKLYE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 243707 244318 . + . GCA_005502385.1_01222_mRNA GCA_005502385.1_01222 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTQYTFTPKDFKAFDVEGLDERMEALNKYIRPQLHQLGDYFSEYFTSQTGETFYAHVAKHARRSVNPPIDTWVAFAPNKRGYKMLPHFQIGLFRDQLFIMYGIMHEGKNKEERVKVFDKHFNALKQLPNDYQISLNHMKKDKQYIKDLSDTDLHQAIDRVKNVKKGEFFIARTLAPSDERLKSDETFLAFIKETFDEFLKLYE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 243707 244318 . + 0 GCA_005502385.1_01222 GCA_005502385.1_01222_gene,GCA_005502385.1_01222_mRNA GCA_005502385.1_01222 hypothetical protein UPF0637 protein SA0957 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MTQYTFTPKDFKAFDVEGLDERMEALNKYIRPQLHQLGDYFSEYFTSQTGETFYAHVAKHARRSVNPPIDTWVAFAPNKRGYKMLPHFQIGLFRDQLFIMYGIMHEGKNKEERVKVFDKHFNALKQLPNDYQISLNHMKKDKQYIKDLSDTDLHQAIDRVKNVKKGEFFIARTLAPSDERLKSDETFLAFIKETFDEFLKLYE persistent 203 UPF0637 protein BUZ51_07965 WP_002448079.1 UPI00019FC95D UniRef100_A0A657ZQG0,UniRef50_Q2G2G7,UniRef90_A0A657ZQG0 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 244498 245844 . + . GCA_005502385.1_01223_gene GCA_005502385.1_01223 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNYMSNKKQRSLDEINNTVDFNSNKSASQKFLAFLGPGLLVAVGYMDPGNWITSMQGGAQFGYILLFIILVSSLAAMLLQSMTVRLGIATEMDLAQMTRHYLNRPLAIIFWIIAELAIIATDIAEIIGSAIALDLLFNIPLIIGALITVLDVFLLLFIMKFGFRKIEAIVGTLIFTVLIIFLFEVFISSPKVINILNGFIPHKDIVTNHSVLYIALGIIGATIMPHNLYLHSSIVQSRKYDRTNENDKAQAIKYATIDSNIQLSIAFIVNCLLLILGAALFYGVNADKLGGFYDLYHALKTQPLLGSVLGSIMSTLFAIALLASGQNSTITGTLSGQIVMEGFLRLSIPNWLRRLITRGLAVIPVIICLIVFKGNENKMEQLLVLSQVFLSIALPFSLIPLQLATSNKKLMGPFYNKNWINFCSWSLIIILSLLNVYLIIETFKEFFA . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 244498 245844 . + . GCA_005502385.1_01223_mRNA GCA_005502385.1_01223 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNYMSNKKQRSLDEINNTVDFNSNKSASQKFLAFLGPGLLVAVGYMDPGNWITSMQGGAQFGYILLFIILVSSLAAMLLQSMTVRLGIATEMDLAQMTRHYLNRPLAIIFWIIAELAIIATDIAEIIGSAIALDLLFNIPLIIGALITVLDVFLLLFIMKFGFRKIEAIVGTLIFTVLIIFLFEVFISSPKVINILNGFIPHKDIVTNHSVLYIALGIIGATIMPHNLYLHSSIVQSRKYDRTNENDKAQAIKYATIDSNIQLSIAFIVNCLLLILGAALFYGVNADKLGGFYDLYHALKTQPLLGSVLGSIMSTLFAIALLASGQNSTITGTLSGQIVMEGFLRLSIPNWLRRLITRGLAVIPVIICLIVFKGNENKMEQLLVLSQVFLSIALPFSLIPLQLATSNKKLMGPFYNKNWINFCSWSLIIILSLLNVYLIIETFKEFFA . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 244498 245844 . + 0 GCA_005502385.1_01223 GCA_005502385.1_01223_gene,GCA_005502385.1_01223_mRNA GCA_005502385.1_01223 Divalent metal cation transporter MntH GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MNYMSNKKQRSLDEINNTVDFNSNKSASQKFLAFLGPGLLVAVGYMDPGNWITSMQGGAQFGYILLFIILVSSLAAMLLQSMTVRLGIATEMDLAQMTRHYLNRPLAIIFWIIAELAIIATDIAEIIGSAIALDLLFNIPLIIGALITVLDVFLLLFIMKFGFRKIEAIVGTLIFTVLIIFLFEVFISSPKVINILNGFIPHKDIVTNHSVLYIALGIIGATIMPHNLYLHSSIVQSRKYDRTNENDKAQAIKYATIDSNIQLSIAFIVNCLLLILGAALFYGVNADKLGGFYDLYHALKTQPLLGSVLGSIMSTLFAIALLASGQNSTITGTLSGQIVMEGFLRLSIPNWLRRLITRGLAVIPVIICLIVFKGNENKMEQLLVLSQVFLSIALPFSLIPLQLATSNKKLMGPFYNKNWINFCSWSLIIILSLLNVYLIIETFKEFFA persistent 448 Nramp family divalent metal transporter GO:0016020,GO:0022857,GO:0055085 WP_054105434.1 UPI0006B8C618 UniRef100_UPI0006B8C618,UniRef50_Q8GH68,UniRef90_A0AAE5MY11 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 246205 247326 . - . GCA_005502385.1_01224_gene GCA_005502385.1_01224 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSGERYTQIKRPVSRLTEKLLGWISWIFLLILTVITMFIALVSFSNDTSIQNLENSMNNNQLIQQILVNNSLNTTQFVIWLQNGIWAIIVYFIICLLISFLALISMNIRILSGILFLIASIITLPLVLLFITLIIPIFFFITAIMMFARRSKLETVPAYGSTYDYPPYYNQRDDYDDRYYYEEEPTQYNDEEEYIEPPRKTKKSERRTRRKPSSYYNEREHDYEDYNHINQNNNEQDFNDDIEEDKYNQYPKRAVTSEYQQSSNDDDTSGVLSRQRKYKYKSKNSMPNEVNDDENNVETDSYIDKKEQKAQRKREKAELRAKKKEKRKAYNQRMKEKRKNQPSAVNQRRMNYEERKQILNKEENKEKHSVDQE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 246205 247326 . - . GCA_005502385.1_01224_mRNA GCA_005502385.1_01224 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSGERYTQIKRPVSRLTEKLLGWISWIFLLILTVITMFIALVSFSNDTSIQNLENSMNNNQLIQQILVNNSLNTTQFVIWLQNGIWAIIVYFIICLLISFLALISMNIRILSGILFLIASIITLPLVLLFITLIIPIFFFITAIMMFARRSKLETVPAYGSTYDYPPYYNQRDDYDDRYYYEEEPTQYNDEEEYIEPPRKTKKSERRTRRKPSSYYNEREHDYEDYNHINQNNNEQDFNDDIEEDKYNQYPKRAVTSEYQQSSNDDDTSGVLSRQRKYKYKSKNSMPNEVNDDENNVETDSYIDKKEQKAQRKREKAELRAKKKEKRKAYNQRMKEKRKNQPSAVNQRRMNYEERKQILNKEENKEKHSVDQE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 246205 247326 . - 0 GCA_005502385.1_01224 GCA_005502385.1_01224_gene,GCA_005502385.1_01224_mRNA GCA_005502385.1_01224 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MSGERYTQIKRPVSRLTEKLLGWISWIFLLILTVITMFIALVSFSNDTSIQNLENSMNNNQLIQQILVNNSLNTTQFVIWLQNGIWAIIVYFIICLLISFLALISMNIRILSGILFLIASIITLPLVLLFITLIIPIFFFITAIMMFARRSKLETVPAYGSTYDYPPYYNQRDDYDDRYYYEEEPTQYNDEEEYIEPPRKTKKSERRTRRKPSSYYNEREHDYEDYNHINQNNNEQDFNDDIEEDKYNQYPKRAVTSEYQQSSNDDDTSGVLSRQRKYKYKSKNSMPNEVNDDENNVETDSYIDKKEQKAQRKREKAELRAKKKEKRKAYNQRMKEKRKNQPSAVNQRRMNYEERKQILNKEENKEKHSVDQE persistent 373 auxB lipoteichoic acid stability factor AuxB WP_017175742.1 UPI00031A3E65 UniRef100_A0A3S7GW92,UniRef50_A0A974KWU6,UniRef90_A0A974KWU6 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 247399 248472 . - . GCA_005502385.1_01225_gene GCA_005502385.1_01225 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKQFFQLIIGAIVVGLICLGISHWFNSQDNTKTGKKVYVYNWGEYIDPDLIKKFEKETGMQVVYETFDSNEAMEAKIKNGGTHYDVAFPSEYTVQKLKREHLLEPLDHQKIPNIKNLDSDYMNMAYDPHNTYSLPYFFGTVGILYNKKAYPNEQFDSWSDLYQSKYKNDILLVDGAREIIGLALNKLGYSLNDSNPVHIKQAEQDLQSLTPQVRGVVGDEITMMLQQNEGHIAVVWSGVAASLVQEGDTYDYVVPKEGSNVWFDNMVIPKTAQNKEGAYQFINFLLDAKNNKQNTEWVGYATPNKAARNLLPNNIKNDHRFYPTQKEQKRLEVYKDLGEKTLGEYNESFLNFKMSLK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 247399 248472 . - . GCA_005502385.1_01225_mRNA GCA_005502385.1_01225 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKQFFQLIIGAIVVGLICLGISHWFNSQDNTKTGKKVYVYNWGEYIDPDLIKKFEKETGMQVVYETFDSNEAMEAKIKNGGTHYDVAFPSEYTVQKLKREHLLEPLDHQKIPNIKNLDSDYMNMAYDPHNTYSLPYFFGTVGILYNKKAYPNEQFDSWSDLYQSKYKNDILLVDGAREIIGLALNKLGYSLNDSNPVHIKQAEQDLQSLTPQVRGVVGDEITMMLQQNEGHIAVVWSGVAASLVQEGDTYDYVVPKEGSNVWFDNMVIPKTAQNKEGAYQFINFLLDAKNNKQNTEWVGYATPNKAARNLLPNNIKNDHRFYPTQKEQKRLEVYKDLGEKTLGEYNESFLNFKMSLK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 247399 248472 . - 0 GCA_005502385.1_01225 GCA_005502385.1_01225_gene,GCA_005502385.1_01225_mRNA GCA_005502385.1_01225 Spermidine/putrescine-binding periplasmic protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKQFFQLIIGAIVVGLICLGISHWFNSQDNTKTGKKVYVYNWGEYIDPDLIKKFEKETGMQVVYETFDSNEAMEAKIKNGGTHYDVAFPSEYTVQKLKREHLLEPLDHQKIPNIKNLDSDYMNMAYDPHNTYSLPYFFGTVGILYNKKAYPNEQFDSWSDLYQSKYKNDILLVDGAREIIGLALNKLGYSLNDSNPVHIKQAEQDLQSLTPQVRGVVGDEITMMLQQNEGHIAVVWSGVAASLVQEGDTYDYVVPKEGSNVWFDNMVIPKTAQNKEGAYQFINFLLDAKNNKQNTEWVGYATPNKAARNLLPNNIKNDHRFYPTQKEQKRLEVYKDLGEKTLGEYNESFLNFKMSLK persistent 357 ABC transporter substrate-binding protein WP_061544461.1 UPI000778E948 UniRef100_UPI000778E948,UniRef50_Q5HQ67,UniRef90_A0A3S7GXN6 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 248469 249278 . - . GCA_005502385.1_01226_gene GCA_005502385.1_01226 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKWYGKLYIGILLVVLYLPIFFLMFYSFNSAGNMVHFEHFTLEHYQALFQDDHLMSVIFNTIAVALLSAAVSTIIGTFGAISIYYLRNKKFKLTLLTLNNVLMVSSDVVIGASFLIMFTALGHIFGLGLGFGTVLASHIAFCIPIVVILVLPQLYEMNHNMLNAARDLGATESQVLGRILLPNLMPAIIGGFFMALTYSLDDFTVSFFVTGNGFSVLSVEVYAMARKGISMEINAISTILFLAIVLGIIGYYALQNTLKRRSAKRGAIE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 248469 249278 . - . GCA_005502385.1_01226_mRNA GCA_005502385.1_01226 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKWYGKLYIGILLVVLYLPIFFLMFYSFNSAGNMVHFEHFTLEHYQALFQDDHLMSVIFNTIAVALLSAAVSTIIGTFGAISIYYLRNKKFKLTLLTLNNVLMVSSDVVIGASFLIMFTALGHIFGLGLGFGTVLASHIAFCIPIVVILVLPQLYEMNHNMLNAARDLGATESQVLGRILLPNLMPAIIGGFFMALTYSLDDFTVSFFVTGNGFSVLSVEVYAMARKGISMEINAISTILFLAIVLGIIGYYALQNTLKRRSAKRGAIE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 248469 249278 . - 0 GCA_005502385.1_01226 GCA_005502385.1_01226_gene,GCA_005502385.1_01226_mRNA GCA_005502385.1_01226 Inner membrane ABC transporter permease protein YdcV GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKWYGKLYIGILLVVLYLPIFFLMFYSFNSAGNMVHFEHFTLEHYQALFQDDHLMSVIFNTIAVALLSAAVSTIIGTFGAISIYYLRNKKFKLTLLTLNNVLMVSSDVVIGASFLIMFTALGHIFGLGLGFGTVLASHIAFCIPIVVILVLPQLYEMNHNMLNAARDLGATESQVLGRILLPNLMPAIIGGFFMALTYSLDDFTVSFFVTGNGFSVLSVEVYAMARKGISMEINAISTILFLAIVLGIIGYYALQNTLKRRSAKRGAIE persistent 269 ABC transporter permease WP_017175744.1 UPI0002D668B2 UniRef100_A0A8X8KI86,UniRef50_S2XKD8,UniRef90_A0A8X8KI86 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 249284 250087 . - . GCA_005502385.1_01227_gene GCA_005502385.1_01227 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRNLNKFLIIPYLLWMIIFIIIPVLLLVYFSFIDINGHFSFTNYRQVFSMKYLKMMWDSIFYAALITIITLIISYPAAYFIRSSKFQNIWLLILIIPTWINLLLKTYAFIGILSHEGMINKMLGIMHIDPLNLLFTSGAFLLVASYIYIPFMILPIFNSMKSIPNNLLQASSDLGANTFTTFRKIILPLTKEGIMTGVQVTFIPALSLFMITRLIAGNKVINIGTSIEEQFLVIQNYGMGSTIAIFLIVFMAFILIITKSKETNGRG . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 249284 250087 . - . GCA_005502385.1_01227_mRNA GCA_005502385.1_01227 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRNLNKFLIIPYLLWMIIFIIIPVLLLVYFSFIDINGHFSFTNYRQVFSMKYLKMMWDSIFYAALITIITLIISYPAAYFIRSSKFQNIWLLILIIPTWINLLLKTYAFIGILSHEGMINKMLGIMHIDPLNLLFTSGAFLLVASYIYIPFMILPIFNSMKSIPNNLLQASSDLGANTFTTFRKIILPLTKEGIMTGVQVTFIPALSLFMITRLIAGNKVINIGTSIEEQFLVIQNYGMGSTIAIFLIVFMAFILIITKSKETNGRG . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 249284 250087 . - 0 GCA_005502385.1_01227 GCA_005502385.1_01227_gene,GCA_005502385.1_01227_mRNA GCA_005502385.1_01227 Spermidine/putrescine transport system permease protein PotB GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MRNLNKFLIIPYLLWMIIFIIIPVLLLVYFSFIDINGHFSFTNYRQVFSMKYLKMMWDSIFYAALITIITLIISYPAAYFIRSSKFQNIWLLILIIPTWINLLLKTYAFIGILSHEGMINKMLGIMHIDPLNLLFTSGAFLLVASYIYIPFMILPIFNSMKSIPNNLLQASSDLGANTFTTFRKIILPLTKEGIMTGVQVTFIPALSLFMITRLIAGNKVINIGTSIEEQFLVIQNYGMGSTIAIFLIVFMAFILIITKSKETNGRG persistent 267 ABC transporter permease WP_049382527.1 UPI00066DB34C UniRef100_UPI00066DB34C,UniRef50_S2XR89,UniRef90_A0A3S7GT16 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 250080 251174 . - . GCA_005502385.1_01228_gene GCA_005502385.1_01228 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MESLLSFKKVTKKFNDTTILNNMNLDIESGYFYTLLGPSGCGKTTILKLIAGFEQPNEGQIIYKNQSIEKLPANKRKVNTVFQDYALFPHLNVYENIAFGLRLKKFSKQEIDKKVKEALKLVKLTGYEQRHIDEMSGGQKQRVAIARAIVNKPEILLLDESLSALDLKLRTEMQYELRELQKRLGITFIFVTHDQEEALALSDYIFVMKDGEIQQFGTPTDIYDEPVNRFVADFIGESNIVDGTMVKDFVVNIYGQDFECVDARIPSGKKIEVVIRPEDISLVESTQGLFTATVDSMLFRGVHYEICCIDEKGYEWVIQSTKKTTIGSQVGLFFEPEAIHIMVPGETEEEFDKRIESYEDIEHA . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 250080 251174 . - . GCA_005502385.1_01228_mRNA GCA_005502385.1_01228 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MESLLSFKKVTKKFNDTTILNNMNLDIESGYFYTLLGPSGCGKTTILKLIAGFEQPNEGQIIYKNQSIEKLPANKRKVNTVFQDYALFPHLNVYENIAFGLRLKKFSKQEIDKKVKEALKLVKLTGYEQRHIDEMSGGQKQRVAIARAIVNKPEILLLDESLSALDLKLRTEMQYELRELQKRLGITFIFVTHDQEEALALSDYIFVMKDGEIQQFGTPTDIYDEPVNRFVADFIGESNIVDGTMVKDFVVNIYGQDFECVDARIPSGKKIEVVIRPEDISLVESTQGLFTATVDSMLFRGVHYEICCIDEKGYEWVIQSTKKTTIGSQVGLFFEPEAIHIMVPGETEEEFDKRIESYEDIEHA . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 250080 251174 . - 0 GCA_005502385.1_01228 GCA_005502385.1_01228_gene,GCA_005502385.1_01228_mRNA GCA_005502385.1_01228 Spermidine/putrescine import ATP-binding protein PotA GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MESLLSFKKVTKKFNDTTILNNMNLDIESGYFYTLLGPSGCGKTTILKLIAGFEQPNEGQIIYKNQSIEKLPANKRKVNTVFQDYALFPHLNVYENIAFGLRLKKFSKQEIDKKVKEALKLVKLTGYEQRHIDEMSGGQKQRVAIARAIVNKPEILLLDESLSALDLKLRTEMQYELRELQKRLGITFIFVTHDQEEALALSDYIFVMKDGEIQQFGTPTDIYDEPVNRFVADFIGESNIVDGTMVKDFVVNIYGQDFECVDARIPSGKKIEVVIRPEDISLVESTQGLFTATVDSMLFRGVHYEICCIDEKGYEWVIQSTKKTTIGSQVGLFFEPEAIHIMVPGETEEEFDKRIESYEDIEHA persistent 364 potA Spermidine/putrescine import ATP-binding protein PotA WP_049382528.1 UPI00066BF70E UniRef100_UPI00066BF70E,UniRef50_Q24XJ2,UniRef90_A0A974QMY7 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 251188 251727 . - . GCA_005502385.1_01229_gene GCA_005502385.1_01229 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQIGYKLKNLRRQKNLTQEELAERTDLSKGYISQIESEYASPSMETFLNILEVLGTTPSDFFKEKAKEKVLYKKSERTIYDEYDRGYILNWVVPSSNEYEMEPLILTIKPGSSYKSFEPSESDTFIYCLEGCVILTLGKERYQAYEGDVLYFRANELHQLHNHSENEVKILIVATASYL . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 251188 251727 . - . GCA_005502385.1_01229_mRNA GCA_005502385.1_01229 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQIGYKLKNLRRQKNLTQEELAERTDLSKGYISQIESEYASPSMETFLNILEVLGTTPSDFFKEKAKEKVLYKKSERTIYDEYDRGYILNWVVPSSNEYEMEPLILTIKPGSSYKSFEPSESDTFIYCLEGCVILTLGKERYQAYEGDVLYFRANELHQLHNHSENEVKILIVATASYL . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 251188 251727 . - 0 GCA_005502385.1_01229 GCA_005502385.1_01229_gene,GCA_005502385.1_01229_mRNA GCA_005502385.1_01229 HTH-type transcriptional regulator PuuR GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MQIGYKLKNLRRQKNLTQEELAERTDLSKGYISQIESEYASPSMETFLNILEVLGTTPSDFFKEKAKEKVLYKKSERTIYDEYDRGYILNWVVPSSNEYEMEPLILTIKPGSSYKSFEPSESDTFIYCLEGCVILTLGKERYQAYEGDVLYFRANELHQLHNHSENEVKILIVATASYL persistent 179 Cro/Cl family transcriptional regulator WP_017175747.1 UPI000318C2CF UniRef100_A0A4Q9WUW1,UniRef50_Q2G2A6,UniRef90_A0AAE5JLT3 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 251858 252130 . - . GCA_005502385.1_01230_gene GCA_005502385.1_01230 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEYQYPLDLDWSNDEMVEVIKFFNQIENYYEKSIIGTELMEQYKKFKQIVPSKAEEKQIFKEFEEKSGYNSYKVIQEVKKHPDRENFSKH . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 251858 252130 . - . GCA_005502385.1_01230_mRNA GCA_005502385.1_01230 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEYQYPLDLDWSNDEMVEVIKFFNQIENYYEKSIIGTELMEQYKKFKQIVPSKAEEKQIFKEFEEKSGYNSYKVIQEVKKHPDRENFSKH . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 251858 252130 . - 0 GCA_005502385.1_01230 GCA_005502385.1_01230_gene,GCA_005502385.1_01230_mRNA GCA_005502385.1_01230 hypothetical protein UPF0223 protein BH2638 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MEYQYPLDLDWSNDEMVEVIKFFNQIENYYEKSIIGTELMEQYKKFKQIVPSKAEEKQIFKEFEEKSGYNSYKVIQEVKKHPDRENFSKH persistent 90 UPF0223 protein AZE34_01855 WP_048762325.1 UPI0006612D1E UniRef100_A0A8I0WBP4,UniRef50_A0A5S9M7X2,UniRef90_A0A3S7GTF9 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 252275 253681 . - . GCA_005502385.1_01231_gene GCA_005502385.1_01231 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGDLGGVCLNVGCIPSKALLHASHRFVEAQHSENLGIIAESVSLKFDKVQEFKQSVVNKLTGGVEGLLKGNKVDIVRGEAYFVDENSLRVMDEKSAQTYNFKNAIIATGSRPIEIPNFEFGKRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKEILGGFEKQMVQPVKKGMKEKGVEIITEAMAKNAEETENGVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGLKFADRGLLEVDKQSRTSIKNIYAIGDIVPGLPLAHKASYEGKVAAEVISGQASEVDYIGMPAVCFTEPELAQVGYTEAQAKEEGLDFKASKFPYAANGRALSLDDTTGFVKLITLKEDDTVIGAQVAGNGASDIISELGLAIEAGMNAEDIALTVHAHPTLGEMTMEVAEKAIGLPIHTM . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 252275 253681 . - . GCA_005502385.1_01231_mRNA GCA_005502385.1_01231 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGDLGGVCLNVGCIPSKALLHASHRFVEAQHSENLGIIAESVSLKFDKVQEFKQSVVNKLTGGVEGLLKGNKVDIVRGEAYFVDENSLRVMDEKSAQTYNFKNAIIATGSRPIEIPNFEFGKRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKEILGGFEKQMVQPVKKGMKEKGVEIITEAMAKNAEETENGVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGLKFADRGLLEVDKQSRTSIKNIYAIGDIVPGLPLAHKASYEGKVAAEVISGQASEVDYIGMPAVCFTEPELAQVGYTEAQAKEEGLDFKASKFPYAANGRALSLDDTTGFVKLITLKEDDTVIGAQVAGNGASDIISELGLAIEAGMNAEDIALTVHAHPTLGEMTMEVAEKAIGLPIHTM . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 252275 253681 . - 0 GCA_005502385.1_01231 GCA_005502385.1_01231_gene,GCA_005502385.1_01231_mRNA GCA_005502385.1_01231 Dihydrolipoyl dehydrogenase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGDLGGVCLNVGCIPSKALLHASHRFVEAQHSENLGIIAESVSLKFDKVQEFKQSVVNKLTGGVEGLLKGNKVDIVRGEAYFVDENSLRVMDEKSAQTYNFKNAIIATGSRPIEIPNFEFGKRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKEILGGFEKQMVQPVKKGMKEKGVEIITEAMAKNAEETENGVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGLKFADRGLLEVDKQSRTSIKNIYAIGDIVPGLPLAHKASYEGKVAAEVISGQASEVDYIGMPAVCFTEPELAQVGYTEAQAKEEGLDFKASKFPYAANGRALSLDDTTGFVKLITLKEDDTVIGAQVAGNGASDIISELGLAIEAGMNAEDIALTVHAHPTLGEMTMEVAEKAIGLPIHTM persistent 468 lpdA dihydrolipoyl dehydrogenase 1.8.1.4 GO:0004148,GO:0005737,GO:0006090,GO:0006103,GO:0016020,GO:0050660 C,COG1249 WP_002455496.1 UPI0001EF51BC UniRef100_A0A1L8Y435,UniRef50_P11959,UniRef90_Q5HGY8 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 253685 254989 . - . GCA_005502385.1_01232_gene GCA_005502385.1_01232 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAFEFRLPDIGEGIHEGEIVKWFVSAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTIEEVVVEEGTVAVVGDVIVKIDAPDAEEMQFKGHDDDDASSKEEEPAKEEAKTEETPAASTSQDEKVDENRRIKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDIDNHLNGGGAQAATASNESAAASTSEDTSAVQTQSVPEGDFPETTEKIPAMRKAIAKAMVNSKHTAPHVTLMDEIDVQELWDHRKKFKEVAAEQGIKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTERGLLVPVVKNADRKSIFQISDEINELAVKARDGKLTSQEMSGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLMEG . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 253685 254989 . - . GCA_005502385.1_01232_mRNA GCA_005502385.1_01232 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAFEFRLPDIGEGIHEGEIVKWFVSAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTIEEVVVEEGTVAVVGDVIVKIDAPDAEEMQFKGHDDDDASSKEEEPAKEEAKTEETPAASTSQDEKVDENRRIKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDIDNHLNGGGAQAATASNESAAASTSEDTSAVQTQSVPEGDFPETTEKIPAMRKAIAKAMVNSKHTAPHVTLMDEIDVQELWDHRKKFKEVAAEQGIKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTERGLLVPVVKNADRKSIFQISDEINELAVKARDGKLTSQEMSGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLMEG . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 253685 254989 . - 0 GCA_005502385.1_01232 GCA_005502385.1_01232_gene,GCA_005502385.1_01232_mRNA GCA_005502385.1_01232 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAFEFRLPDIGEGIHEGEIVKWFVSAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTIEEVVVEEGTVAVVGDVIVKIDAPDAEEMQFKGHDDDDASSKEEEPAKEEAKTEETPAASTSQDEKVDENRRIKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDIDNHLNGGGAQAATASNESAAASTSEDTSAVQTQSVPEGDFPETTEKIPAMRKAIAKAMVNSKHTAPHVTLMDEIDVQELWDHRKKFKEVAAEQGIKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADTERGLLVPVVKNADRKSIFQISDEINELAVKARDGKLTSQEMSGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLMEG persistent 434 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex UniRef50_P21883 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 255211 256188 . - . GCA_005502385.1_01233_gene GCA_005502385.1_01233 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAQMTMVQAINNALKTELQNDENVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLTVEGFRPVMEIQFLGFVFEVFDEVAGQIARTRFRSGGSKTAPVTIRTPFGGGVHTPELHADNLEGILAQSPGIKVVIPSGPYDAKGLLLSSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIEIGKANVKKEGNDITLIAYGAMVQESEKAAEELEKEGYSVEVIDLRTVQPIDIDTLVASVEKTGRAVVVQEAQRQAGVGATVAAELAERAILSLEAPIARVAAADTVYPFTQAENVWLPNKNDIIEQAKATLEF . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 255211 256188 . - . GCA_005502385.1_01233_mRNA GCA_005502385.1_01233 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAQMTMVQAINNALKTELQNDENVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLTVEGFRPVMEIQFLGFVFEVFDEVAGQIARTRFRSGGSKTAPVTIRTPFGGGVHTPELHADNLEGILAQSPGIKVVIPSGPYDAKGLLLSSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIEIGKANVKKEGNDITLIAYGAMVQESEKAAEELEKEGYSVEVIDLRTVQPIDIDTLVASVEKTGRAVVVQEAQRQAGVGATVAAELAERAILSLEAPIARVAAADTVYPFTQAENVWLPNKNDIIEQAKATLEF . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 255211 256188 . - 0 GCA_005502385.1_01233 GCA_005502385.1_01233_gene,GCA_005502385.1_01233_mRNA GCA_005502385.1_01233 Pyruvate dehydrogenase E1 component subunit beta GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAQMTMVQAINNALKTELQNDENVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLTVEGFRPVMEIQFLGFVFEVFDEVAGQIARTRFRSGGSKTAPVTIRTPFGGGVHTPELHADNLEGILAQSPGIKVVIPSGPYDAKGLLLSSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIEIGKANVKKEGNDITLIAYGAMVQESEKAAEELEKEGYSVEVIDLRTVQPIDIDTLVASVEKTGRAVVVQEAQRQAGVGATVAAELAERAILSLEAPIARVAAADTVYPFTQAENVWLPNKNDIIEQAKATLEF persistent 325 pdhB Pyruvate dehydrogenase E1 component subunit beta 1.2.4.1 GO:0004739 C,COG0022 WP_002448131.1 UPI00019FC952 UniRef100_A0A4Q9WSU0,UniRef50_Q5HQ75,UniRef90_Q5HQ75 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 256192 257304 . - . GCA_005502385.1_01234_gene GCA_005502385.1_01234 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAPKLQAQFDAVKVLNDTQSKFEMVQILDVDGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDFILPGYRDVPQLIWHGLPLTDAFLFSRGHFKGNQFPEGVNAFSPQIIIGAQYIQTAGVAFGIKKRGKKAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAISTPRSKQTAATTLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAINGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWSEEKENEVIERAKDDIKKAIKEADNTPKQTVLDLMDIMYEDMPQNLAEQYEIYKEKESK . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 256192 257304 . - . GCA_005502385.1_01234_mRNA GCA_005502385.1_01234 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAPKLQAQFDAVKVLNDTQSKFEMVQILDVDGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDFILPGYRDVPQLIWHGLPLTDAFLFSRGHFKGNQFPEGVNAFSPQIIIGAQYIQTAGVAFGIKKRGKKAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAISTPRSKQTAATTLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAINGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWSEEKENEVIERAKDDIKKAIKEADNTPKQTVLDLMDIMYEDMPQNLAEQYEIYKEKESK . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 256192 257304 . - 0 GCA_005502385.1_01234 GCA_005502385.1_01234_gene,GCA_005502385.1_01234_mRNA GCA_005502385.1_01234 Pyruvate dehydrogenase E1 component subunit alpha GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAPKLQAQFDAVKVLNDTQSKFEMVQILDVDGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDFILPGYRDVPQLIWHGLPLTDAFLFSRGHFKGNQFPEGVNAFSPQIIIGAQYIQTAGVAFGIKKRGKKAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAISTPRSKQTAATTLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAINGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWSEEKENEVIERAKDDIKKAIKEADNTPKQTVLDLMDIMYEDMPQNLAEQYEIYKEKESK persistent 370 pdhA pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 1.2.4.1 GO:0004739,GO:0006086,GO:0009083,GO:0045254 C,COG1071 WP_002448048.1 UPI00019FC951 UniRef100_A0A1L8Y420,UniRef50_P21881,UniRef90_Q5HGZ1 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 257471 258100 . - . GCA_005502385.1_01235_gene GCA_005502385.1_01235 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKLRKTIVVAAASTLLLAGCTTDKKEVKAYDENVQKAFDKEQSINEVSKKLNSLEEKKQGLYKKANSNDSNTRSKAADDVLDNIDKREKTFDKEVSILKNSEKQFKKGDSHINDIKNDNKRKEVKQLDDAIKNKYKTHDDYAKAYRNVLSKEKDLFELVKQDGVTQSQVDEKNNALNKAQENFKKKFQAYAKAMNTVNKEKQDVDHLIS . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 257471 258100 . - . GCA_005502385.1_01235_mRNA GCA_005502385.1_01235 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKLRKTIVVAAASTLLLAGCTTDKKEVKAYDENVQKAFDKEQSINEVSKKLNSLEEKKQGLYKKANSNDSNTRSKAADDVLDNIDKREKTFDKEVSILKNSEKQFKKGDSHINDIKNDNKRKEVKQLDDAIKNKYKTHDDYAKAYRNVLSKEKDLFELVKQDGVTQSQVDEKNNALNKAQENFKKKFQAYAKAMNTVNKEKQDVDHLIS . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 257471 258100 . - 0 GCA_005502385.1_01235 GCA_005502385.1_01235_gene,GCA_005502385.1_01235_mRNA GCA_005502385.1_01235 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKLRKTIVVAAASTLLLAGCTTDKKEVKAYDENVQKAFDKEQSINEVSKKLNSLEEKKQGLYKKANSNDSNTRSKAADDVLDNIDKREKTFDKEVSILKNSEKQFKKGDSHINDIKNDNKRKEVKQLDDAIKNKYKTHDDYAKAYRNVLSKEKDLFELVKQDGVTQSQVDEKNNALNKAQENFKKKFQAYAKAMNTVNKEKQDVDHLIS persistent 209 Lipoprotein WP_017175751.1 UPI0002D971C0 UniRef100_A0A3S7GXP1,UniRef50_A0A1S2MKA7,UniRef90_A0A549W121 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 258235 258786 . + . GCA_005502385.1_01236_gene GCA_005502385.1_01236 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLTMKDIIRDGHPTLREKAKDVNLPLSEEDKNTLRDMREFLINSQDDEIAKKYGLRSGVGLAAPQINISKKMIAVYLPDDGEGKSYDYMLVNPKVISHSVQHAYLPTGEGCLSVDENIPGLVHRHYRTTIKAYDIDGNEVKLRLKGYPAIVFQHEIDHLNGIMFYDYIDKDHPLTPLPDSVEV . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 258235 258786 . + . GCA_005502385.1_01236_mRNA GCA_005502385.1_01236 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLTMKDIIRDGHPTLREKAKDVNLPLSEEDKNTLRDMREFLINSQDDEIAKKYGLRSGVGLAAPQINISKKMIAVYLPDDGEGKSYDYMLVNPKVISHSVQHAYLPTGEGCLSVDENIPGLVHRHYRTTIKAYDIDGNEVKLRLKGYPAIVFQHEIDHLNGIMFYDYIDKDHPLTPLPDSVEV . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 258235 258786 . + 0 GCA_005502385.1_01236 GCA_005502385.1_01236_gene,GCA_005502385.1_01236_mRNA GCA_005502385.1_01236 Peptide deformylase GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MLTMKDIIRDGHPTLREKAKDVNLPLSEEDKNTLRDMREFLINSQDDEIAKKYGLRSGVGLAAPQINISKKMIAVYLPDDGEGKSYDYMLVNPKVISHSVQHAYLPTGEGCLSVDENIPGLVHRHYRTTIKAYDIDGNEVKLRLKGYPAIVFQHEIDHLNGIMFYDYIDKDHPLTPLPDSVEV persistent 183 def peptide deformylase 3.5.1.88 GO:0036211,GO:0042586 WP_002448106.1 UPI00019FC94F UniRef100_A0A1L8Y415,UniRef50_Q8Y866,UniRef90_A0A380G0L6 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 259142 259360 . + . GCA_005502385.1_01237_gene GCA_005502385.1_01237 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAVFKVFFQHNKDEVIVRENTNTIYVEGETEEQVRRYLKDRNYNIEFITKLEGAHLEYEKEHSDHFNVENAQ . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 259142 259360 . + . GCA_005502385.1_01237_mRNA GCA_005502385.1_01237 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAVFKVFFQHNKDEVIVRENTNTIYVEGETEEQVRRYLKDRNYNIEFITKLEGAHLEYEKEHSDHFNVENAQ . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 259142 259360 . + 0 GCA_005502385.1_01237 GCA_005502385.1_01237_gene,GCA_005502385.1_01237_mRNA GCA_005502385.1_01237 hypothetical protein GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MAVFKVFFQHNKDEVIVRENTNTIYVEGETEEQVRRYLKDRNYNIEFITKLEGAHLEYEKEHSDHFNVENAQ persistent 72 rpoY DNA-directed RNA polymerase subunit epsilon 2.7.7.6 GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677 COG5503,KV WP_002448185.1 UPI000054BCAD UniRef100_Q4L5A4,UniRef50_Q49WL4,UniRef90_Q5HQ79 . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka gene 259360 261039 . + . GCA_005502385.1_01238_gene GCA_005502385.1_01238 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKQLHSNEVGVYALGGLGEVGKNTYAVEYKDEIVIIDAGIKFPDDNLLGIDYVIPDYTYLEQNQDKIVGLFITHGHEDHIGGVPYLLKQINVPIYGGPLALGLIRNKLEEHNLLRNASLNEITEDSVIKSKHFEISFYLTTHSIPEAYGVVVDTPEGKIVHTGDFKFDFTPVGAPANIAKMAELGKEGVLCLLSDSTNALVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNIYRVQQAVEAAIKYNRKIVTFGRSMENNIKIGMELGYIKAPPETFVEPNKINNIPKHELLILCTGSQGEPMAALSRIANGTHKQIKIIPDDTVVFSSSPIPGNTKSINRTINALYKAGADVIHSKISNIHTSGHGSQGDQQLMLRLIQPKYFLPIHGEYRMLKAHGQTGIDCGVKEENVFIFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSIDFNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLNSNDDIQWHQIKSSIIETLQPYLYEKTARRPMILPVIMKVNEE . . . . . . . GCA_005502385.1|SCOV01000002.1 prokka mRNA 259360 261039 . + . GCA_005502385.1_01238_mRNA GCA_005502385.1_01238 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKQLHSNEVGVYALGGLGEVGKNTYAVEYKDEIVIIDAGIKFPDDNLLGIDYVIPDYTYLEQNQDKIVGLFITHGHEDHIGGVPYLLKQINVPIYGGPLALGLIRNKLEEHNLLRNASLNEITEDSVIKSKHFEISFYLTTHSIPEAYGVVVDTPEGKIVHTGDFKFDFTPVGAPANIAKMAELGKEGVLCLLSDSTNALVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNIYRVQQAVEAAIKYNRKIVTFGRSMENNIKIGMELGYIKAPPETFVEPNKINNIPKHELLILCTGSQGEPMAALSRIANGTHKQIKIIPDDTVVFSSSPIPGNTKSINRTINALYKAGADVIHSKISNIHTSGHGSQGDQQLMLRLIQPKYFLPIHGEYRMLKAHGQTGIDCGVKEENVFIFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSIDFNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLNSNDDIQWHQIKSSIIETLQPYLYEKTARRPMILPVIMKVNEE . . . . . . . GCA_005502385.1|SCOV01000002.1 Prodigal:002006 CDS 259360 261039 . + 0 GCA_005502385.1_01238 GCA_005502385.1_01238_gene,GCA_005502385.1_01238_mRNA GCA_005502385.1_01238 Ribonuclease J 1 GCA_005502385.1 SCOV01000002.1 GCA_005502385.1|SCOV01000002.1 GCA_005502385.1_SCOV01000002.1 MKQLHSNEVGVYALGGLGEVGKNTYAVEYKDEIVIIDAGIKFPDDNLLGIDYVIPDYTYLEQNQDKIVGLFITHGHEDHIGGVPYLLKQINVPIYGGPLALGLIRNKLEEHNLLRNASLNEITEDSVIKSKHFEISFYLTTHSIPEAYGVVVDTPEGKIVHTGDFKFDFTPVGAPANIAKMAELGKEGVLCLLSDSTNALVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNIYRVQQAVEAAIKYNRKIVTFGRSMENNIKIGMELGYIKAPPETFVEPNKINNIPKHELLILCTGSQGEPMAALSRIANGTHKQIKIIPDDTVVFSSSPIPGNTKSINRTINALYKAGADVIHSKISNIHTSGHGSQGDQQLMLRLIQPKYFLPIHGEYRMLKAHGQTGIDCGVKEENVFIFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSIDFNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLNSNDDIQWHQIKSSIIETLQPYLYEKTARRPMILPVIMKVNEE persistent 559 rnjA ribonuclease J1 3.1.-.- GO:0003723,GO:0004521,GO:0004534,GO:0005737,GO:0006364,GO:0008270 COG0595,J WP_002448244.1 UPI00019FC94E UniRef100_A0A1L8Y426,UniRef50_Q2FZG9,UniRef90_Q2FZG9 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 141 971 . - . GCA_005502385.1_01239_gene GCA_005502385.1_01239 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MALKKVLTIAGSDTSAGAGMQADLKTFQELNTYGMVALTAVVTMDKETWSHDVTPLPMDVFEKQLETVISIGPDAVKTGMLGTEEIIKRAGEAFEQSGAKYFVVDPVMVCKGEDEVLNPGNTDAMIKYLLPKATVVTPNLFEAGQLSGLGKLTSIEDMKKAAKIIYDQGAQHIIIKGGKALDQDKSYDLYYDGQTYYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAFVASAIKNGWKMNDFVGPVDHGAYNRVEHIDVDVKEV . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 141 971 . - . GCA_005502385.1_01239_mRNA GCA_005502385.1_01239 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MALKKVLTIAGSDTSAGAGMQADLKTFQELNTYGMVALTAVVTMDKETWSHDVTPLPMDVFEKQLETVISIGPDAVKTGMLGTEEIIKRAGEAFEQSGAKYFVVDPVMVCKGEDEVLNPGNTDAMIKYLLPKATVVTPNLFEAGQLSGLGKLTSIEDMKKAAKIIYDQGAQHIIIKGGKALDQDKSYDLYYDGQTYYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAFVASAIKNGWKMNDFVGPVDHGAYNRVEHIDVDVKEV . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 141 971 . - 0 GCA_005502385.1_01239 GCA_005502385.1_01239_gene,GCA_005502385.1_01239_mRNA GCA_005502385.1_01239 Pyridoxine kinase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MALKKVLTIAGSDTSAGAGMQADLKTFQELNTYGMVALTAVVTMDKETWSHDVTPLPMDVFEKQLETVISIGPDAVKTGMLGTEEIIKRAGEAFEQSGAKYFVVDPVMVCKGEDEVLNPGNTDAMIKYLLPKATVVTPNLFEAGQLSGLGKLTSIEDMKKAAKIIYDQGAQHIIIKGGKALDQDKSYDLYYDGQTYYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAFVASAIKNGWKMNDFVGPVDHGAYNRVEHIDVDVKEV persistent 276 pdxK Putative pyridoxine kinase 2.7.1.35 GO:0005524,GO:0005829,GO:0008478,GO:0008902,GO:0008972,GO:0009228,GO:0046872 COG0351,H WP_002455702.1 UPI0001EF54EC UniRef100_A0A4Q9WR43,UniRef50_Q8CTQ7,UniRef90_Q5HI96 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 1113 1772 . + . GCA_005502385.1_01240_gene GCA_005502385.1_01240 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEWSDIFHDITTKHDFKAMHDFLEKEYTTQIVYPDRENIYQAFDLTPFEDIKVVILGQDPYHGPNQAHGLAFSVQPNAKFPPSLRNMYQELEDDIGCHRTSPHLQDWAREGVLLLNTVLTVRKGEAHSHKDIGWEIFTDEVIKAISDYREDVVFILWGKPAQQKIKLIDTAKHHIIKSVHPSPLSAYRGFFGSKPYSRTNDYLESKGKTPIQWCESGES . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 1113 1772 . + . GCA_005502385.1_01240_mRNA GCA_005502385.1_01240 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEWSDIFHDITTKHDFKAMHDFLEKEYTTQIVYPDRENIYQAFDLTPFEDIKVVILGQDPYHGPNQAHGLAFSVQPNAKFPPSLRNMYQELEDDIGCHRTSPHLQDWAREGVLLLNTVLTVRKGEAHSHKDIGWEIFTDEVIKAISDYREDVVFILWGKPAQQKIKLIDTAKHHIIKSVHPSPLSAYRGFFGSKPYSRTNDYLESKGKTPIQWCESGES . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 1113 1772 . + 0 GCA_005502385.1_01240 GCA_005502385.1_01240_gene,GCA_005502385.1_01240_mRNA GCA_005502385.1_01240 Uracil-DNA glycosylase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEWSDIFHDITTKHDFKAMHDFLEKEYTTQIVYPDRENIYQAFDLTPFEDIKVVILGQDPYHGPNQAHGLAFSVQPNAKFPPSLRNMYQELEDDIGCHRTSPHLQDWAREGVLLLNTVLTVRKGEAHSHKDIGWEIFTDEVIKAISDYREDVVFILWGKPAQQKIKLIDTAKHHIIKSVHPSPLSAYRGFFGSKPYSRTNDYLESKGKTPIQWCESGES persistent 219 uracil-DNA glycosylase 3.2.2.27 GO:0004844,GO:0006284 WP_002488583.1 UPI00024E1F37 UniRef100_A0A2A1MF50,UniRef50_Q4L3Q7,UniRef90_A0A2A1MF50 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 1773 2123 . + . GCA_005502385.1_01241_gene GCA_005502385.1_01241 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNKEQLIQLIEQELVQAEEAQDEQQFEKHMYAIHTLTSLYSDVSKRPSKKSKHDFTNIVTSESSFSNKPSNHSAITAAEIEAMGGKVPQTMKHQTKSSNMMVTDDEIGNGESIFDF . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 1773 2123 . + . GCA_005502385.1_01241_mRNA GCA_005502385.1_01241 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNKEQLIQLIEQELVQAEEAQDEQQFEKHMYAIHTLTSLYSDVSKRPSKKSKHDFTNIVTSESSFSNKPSNHSAITAAEIEAMGGKVPQTMKHQTKSSNMMVTDDEIGNGESIFDF . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 1773 2123 . + 0 GCA_005502385.1_01241 GCA_005502385.1_01241_gene,GCA_005502385.1_01241_mRNA GCA_005502385.1_01241 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNKEQLIQLIEQELVQAEEAQDEQQFEKHMYAIHTLTSLYSDVSKRPSKKSKHDFTNIVTSESSFSNKPSNHSAITAAEIEAMGGKVPQTMKHQTKSSNMMVTDDEIGNGESIFDF persistent 116 ywdI YwdI family protein WP_049379668.1 UPI00066D48B1 UniRef100_UPI00066D48B1,UniRef50_B9DKT4,UniRef90_A0A974QMK4 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 2154 2525 . + . GCA_005502385.1_01242_gene GCA_005502385.1_01242 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MMKVFIILGALCTMMSVGTGAFGAHGLEGKLSDKYMSVWEKAVNYQMYHGLGLIMIGIISGTTSINVNWAGWLLFFGIVLFSGSLYILALTQIRILGAITPIGGVLFIVGWLMLIIATFKFAG . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 2154 2525 . + . GCA_005502385.1_01242_mRNA GCA_005502385.1_01242 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MMKVFIILGALCTMMSVGTGAFGAHGLEGKLSDKYMSVWEKAVNYQMYHGLGLIMIGIISGTTSINVNWAGWLLFFGIVLFSGSLYILALTQIRILGAITPIGGVLFIVGWLMLIIATFKFAG . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 2154 2525 . + 0 GCA_005502385.1_01242 GCA_005502385.1_01242_gene,GCA_005502385.1_01242_mRNA GCA_005502385.1_01242 hypothetical protein UPF0382 membrane protein YwdK GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MMKVFIILGALCTMMSVGTGAFGAHGLEGKLSDKYMSVWEKAVNYQMYHGLGLIMIGIISGTTSINVNWAGWLLFFGIVLFSGSLYILALTQIRILGAITPIGGVLFIVGWLMLIIATFKFAG persistent 123 DUF423 domain-containing protein UniRef50_Q5HRG3,UniRef90_A0AAE5JMH6 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 2596 4065 . + . GCA_005502385.1_01243_gene GCA_005502385.1_01243 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNNKNREIDRGDLKQNLSEKFVWAIAYGSCIGWGAFILPGDWIKQSGPIASSIGIVIGALLMILIAVSYGALVERFPVSGGAFAFSYLSFGRYVSFFSSWFLTFGYVCVVALNATAFSLLIKFLLPNILNNGRLYTIAGWDVYITEIVIATVLLLVFMFIAIRGASVSGTLQYYFCIAMVIVVVLMFVGSFFGNNFSLSNLQPLASKELGWFNSIIMIVAIAPWAYVGFDNIPQTAEEFNFSPNKTFKLIVYSLLAAALTYVIMILYTGWLGTNNANFNGNLWLTGAETQTAFGYIGLGILAIAIIMGIFTGLNGFLMSSSRLLFSMGRAGIMPKAFSKLHPKYKTPYVAIIFLVAITLIAPWLGRTALTWIVDMSSTGVSIAYFITCLSAAKLFSYNKQSNTYGPIYKTFAILGSIVSFIFLLLLLVPGSPASLSMPSYIALGSWLVIGLIFFVVRYPKLKNMNNDELSRLILNQSEREVKEMIQDKK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 2596 4065 . + . GCA_005502385.1_01243_mRNA GCA_005502385.1_01243 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNNKNREIDRGDLKQNLSEKFVWAIAYGSCIGWGAFILPGDWIKQSGPIASSIGIVIGALLMILIAVSYGALVERFPVSGGAFAFSYLSFGRYVSFFSSWFLTFGYVCVVALNATAFSLLIKFLLPNILNNGRLYTIAGWDVYITEIVIATVLLLVFMFIAIRGASVSGTLQYYFCIAMVIVVVLMFVGSFFGNNFSLSNLQPLASKELGWFNSIIMIVAIAPWAYVGFDNIPQTAEEFNFSPNKTFKLIVYSLLAAALTYVIMILYTGWLGTNNANFNGNLWLTGAETQTAFGYIGLGILAIAIIMGIFTGLNGFLMSSSRLLFSMGRAGIMPKAFSKLHPKYKTPYVAIIFLVAITLIAPWLGRTALTWIVDMSSTGVSIAYFITCLSAAKLFSYNKQSNTYGPIYKTFAILGSIVSFIFLLLLLVPGSPASLSMPSYIALGSWLVIGLIFFVVRYPKLKNMNNDELSRLILNQSEREVKEMIQDKK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 2596 4065 . + 0 GCA_005502385.1_01243 GCA_005502385.1_01243_gene,GCA_005502385.1_01243_mRNA GCA_005502385.1_01243 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNNKNREIDRGDLKQNLSEKFVWAIAYGSCIGWGAFILPGDWIKQSGPIASSIGIVIGALLMILIAVSYGALVERFPVSGGAFAFSYLSFGRYVSFFSSWFLTFGYVCVVALNATAFSLLIKFLLPNILNNGRLYTIAGWDVYITEIVIATVLLLVFMFIAIRGASVSGTLQYYFCIAMVIVVVLMFVGSFFGNNFSLSNLQPLASKELGWFNSIIMIVAIAPWAYVGFDNIPQTAEEFNFSPNKTFKLIVYSLLAAALTYVIMILYTGWLGTNNANFNGNLWLTGAETQTAFGYIGLGILAIAIIMGIFTGLNGFLMSSSRLLFSMGRAGIMPKAFSKLHPKYKTPYVAIIFLVAITLIAPWLGRTALTWIVDMSSTGVSIAYFITCLSAAKLFSYNKQSNTYGPIYKTFAILGSIVSFIFLLLLLVPGSPASLSMPSYIALGSWLVIGLIFFVVRYPKLKNMNNDELSRLILNQSEREVKEMIQDKK persistent 489 APC family permease WP_049379667.1 UPI00066DEDEA UniRef100_A0A8I1BDK0,UniRef50_Q2G0J4,UniRef90_A0A3S7GUC1 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 4122 4574 . - . GCA_005502385.1_01244_gene GCA_005502385.1_01244 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MFWLFNFIFSYTASLFFCVIFDAPRKLYLSCGFVGACGWMVYILFYQGLNIHTIYSSFFGSFTLGLISHYMARKKREPAIIFMVTGIIPLVPGGLAFDATKNLVLLQFGKAINTMLEVTLIAGAIALGLLFADQISKIIVSGFARRRKRI . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 4122 4574 . - . GCA_005502385.1_01244_mRNA GCA_005502385.1_01244 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MFWLFNFIFSYTASLFFCVIFDAPRKLYLSCGFVGACGWMVYILFYQGLNIHTIYSSFFGSFTLGLISHYMARKKREPAIIFMVTGIIPLVPGGLAFDATKNLVLLQFGKAINTMLEVTLIAGAIALGLLFADQISKIIVSGFARRRKRI . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 4122 4574 . - 0 GCA_005502385.1_01244 GCA_005502385.1_01244_gene,GCA_005502385.1_01244_mRNA GCA_005502385.1_01244 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MFWLFNFIFSYTASLFFCVIFDAPRKLYLSCGFVGACGWMVYILFYQGLNIHTIYSSFFGSFTLGLISHYMARKKREPAIIFMVTGIIPLVPGGLAFDATKNLVLLQFGKAINTMLEVTLIAGAIALGLLFADQISKIIVSGFARRRKRI persistent 150 yjjB Threonine/Serine exporter ThrE domain-containing protein C,COG3610 WP_002448879.1 UPI00019FCA6F UniRef100_A0A1L8Y6D1,UniRef50_Q2G0J3,UniRef90_A0A974QMJ8 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 4587 5402 . - . GCA_005502385.1_01245_gene GCA_005502385.1_01245 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MYFYYNNDYILTNGDEMENTNKQEHIDETLIKDVVMMAGRILLESGAEGTRVEDTMTRIARKLGYPESNSFVTNTVIQFTLHNESYPRIFRINSRDTNLIKISQANEISRLITKGDISLEDAKERLEKIYIAKRDSSLTFKGIAAAIIAISFLYLQGGQFIDVITALLAGSIGYLVVEILDRRLHAQFIPEFVGSLVIGIIAVFGHWLASSGDLATIIIAAVMPIVPGVLITNAIQDLFGGHMMMFTTKSLEALVTAFGIGAGVGSILILV . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 4587 5402 . - . GCA_005502385.1_01245_mRNA GCA_005502385.1_01245 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MYFYYNNDYILTNGDEMENTNKQEHIDETLIKDVVMMAGRILLESGAEGTRVEDTMTRIARKLGYPESNSFVTNTVIQFTLHNESYPRIFRINSRDTNLIKISQANEISRLITKGDISLEDAKERLEKIYIAKRDSSLTFKGIAAAIIAISFLYLQGGQFIDVITALLAGSIGYLVVEILDRRLHAQFIPEFVGSLVIGIIAVFGHWLASSGDLATIIIAAVMPIVPGVLITNAIQDLFGGHMMMFTTKSLEALVTAFGIGAGVGSILILV . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 4587 5402 . - 0 GCA_005502385.1_01245 GCA_005502385.1_01245_gene,GCA_005502385.1_01245_mRNA GCA_005502385.1_01245 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MYFYYNNDYILTNGDEMENTNKQEHIDETLIKDVVMMAGRILLESGAEGTRVEDTMTRIARKLGYPESNSFVTNTVIQFTLHNESYPRIFRINSRDTNLIKISQANEISRLITKGDISLEDAKERLEKIYIAKRDSSLTFKGIAAAIIAISFLYLQGGQFIDVITALLAGSIGYLVVEILDRRLHAQFIPEFVGSLVIGIIAVFGHWLASSGDLATIIIAAVMPIVPGVLITNAIQDLFGGHMMMFTTKSLEALVTAFGIGAGVGSILILV persistent 271 Threonine/serine exporter-like N-terminal domain-containing protein UniRef50_Q49VD8,UniRef90_A0A974KW28 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 5567 5689 . + . GCA_005502385.1_01246_gene GCA_005502385.1_01246 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 5567 5689 . + . GCA_005502385.1_01246_mRNA GCA_005502385.1_01246 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 . . . . . . . GCA_005502385.1|SCOV01000003.1 Infernal:001001 misc_RNA 5567 5689 84.7 + . GCA_005502385.1_01246 GCA_005502385.1_01246_gene,GCA_005502385.1_01246_mRNA GCA_005502385.1_01246 RsaA GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 5787 6536 . - . GCA_005502385.1_01247_gene GCA_005502385.1_01247 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSEAAETLDGWYSLHLFYAVDWATFRLVPEDEREAMINEFKVFIKNKATAREKQAGDYALYNITGQKADILLWYLRPEMKELNEIENELNKLRIADFFIQTYSYVSVIELGNYLAGKSDEDPYENPHIKARLYPELPRTEYICFYPMDKRRNETYNWYMLPMEDRKKLMYNHGMIGRKFAGKIKQFITGSVGFDDFEWGVTLFSDDVLQFKKIVYEMRFDETTARYGDFGSFYIGHILTTDHFDQFFAI . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 5787 6536 . - . GCA_005502385.1_01247_mRNA GCA_005502385.1_01247 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSEAAETLDGWYSLHLFYAVDWATFRLVPEDEREAMINEFKVFIKNKATAREKQAGDYALYNITGQKADILLWYLRPEMKELNEIENELNKLRIADFFIQTYSYVSVIELGNYLAGKSDEDPYENPHIKARLYPELPRTEYICFYPMDKRRNETYNWYMLPMEDRKKLMYNHGMIGRKFAGKIKQFITGSVGFDDFEWGVTLFSDDVLQFKKIVYEMRFDETTARYGDFGSFYIGHILTTDHFDQFFAI . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 5787 6536 . - 0 GCA_005502385.1_01247 GCA_005502385.1_01247_gene,GCA_005502385.1_01247_mRNA GCA_005502385.1_01247 Putative heme-dependent peroxidase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSEAAETLDGWYSLHLFYAVDWATFRLVPEDEREAMINEFKVFIKNKATAREKQAGDYALYNITGQKADILLWYLRPEMKELNEIENELNKLRIADFFIQTYSYVSVIELGNYLAGKSDEDPYENPHIKARLYPELPRTEYICFYPMDKRRNETYNWYMLPMEDRKKLMYNHGMIGRKFAGKIKQFITGSVGFDDFEWGVTLFSDDVLQFKKIVYEMRFDETTARYGDFGSFYIGHILTTDHFDQFFAI persistent 249 hemQ hydrogen peroxide-dependent heme synthase 1.3.98.5 GO:0004601,GO:0006783,GO:0006785,GO:0020037,GO:0046872 COG3253,HP WP_002488567.1 UPI00024E1B29 UniRef100_A0A8I1BGQ4,UniRef50_Q8Y5F1,UniRef90_Q4L3R3 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 6707 7696 . + . GCA_005502385.1_01248_gene GCA_005502385.1_01248 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSSLLDVLQEKLSGKNVRIVLPEGEDERVLTAATKLQATDYVTPLVLGNEEKVNTLAQDKGLDISNIQIIDPSKSDLKPELVKSFVERRKGKATEEQAQELLNNVNYFGTMLVYAGHADGLVSGAAHSTGDTVRPALQIIKTKPGVSRTSGIFFMIKEDKQYIFGDCAINPTLESSDLAEIAVESAKSAKSFGMDPRVAMLSFSTKGSAKSDDVEKVANAVKLAQEKVESEGLDNVVVDGEFQFDAAIVPAVAEKKAPGAKIQGDANVFVFPSLEAGNIGYKIAQRLGGFEAIGPVLQGLNSPVNDLSRGCSTEDVYNLSIITAAQTLQ . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 6707 7696 . + . GCA_005502385.1_01248_mRNA GCA_005502385.1_01248 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSSLLDVLQEKLSGKNVRIVLPEGEDERVLTAATKLQATDYVTPLVLGNEEKVNTLAQDKGLDISNIQIIDPSKSDLKPELVKSFVERRKGKATEEQAQELLNNVNYFGTMLVYAGHADGLVSGAAHSTGDTVRPALQIIKTKPGVSRTSGIFFMIKEDKQYIFGDCAINPTLESSDLAEIAVESAKSAKSFGMDPRVAMLSFSTKGSAKSDDVEKVANAVKLAQEKVESEGLDNVVVDGEFQFDAAIVPAVAEKKAPGAKIQGDANVFVFPSLEAGNIGYKIAQRLGGFEAIGPVLQGLNSPVNDLSRGCSTEDVYNLSIITAAQTLQ . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 6707 7696 . + 0 GCA_005502385.1_01248 GCA_005502385.1_01248_gene,GCA_005502385.1_01248_mRNA GCA_005502385.1_01248 Phosphate acetyltransferase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSSLLDVLQEKLSGKNVRIVLPEGEDERVLTAATKLQATDYVTPLVLGNEEKVNTLAQDKGLDISNIQIIDPSKSDLKPELVKSFVERRKGKATEEQAQELLNNVNYFGTMLVYAGHADGLVSGAAHSTGDTVRPALQIIKTKPGVSRTSGIFFMIKEDKQYIFGDCAINPTLESSDLAEIAVESAKSAKSFGMDPRVAMLSFSTKGSAKSDDVEKVANAVKLAQEKVESEGLDNVVVDGEFQFDAAIVPAVAEKKAPGAKIQGDANVFVFPSLEAGNIGYKIAQRLGGFEAIGPVLQGLNSPVNDLSRGCSTEDVYNLSIITAAQTLQ persistent 329 pta phosphate acetyltransferase 2.3.1.8 GO:0006086,GO:0008959 C,COG0280 WP_002488580.1 UPI00024E1B28 UniRef100_A0A974KW35,UniRef50_P39646,UniRef90_A0A3S7GXX1 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 7696 8532 . + . GCA_005502385.1_01249_gene GCA_005502385.1_01249 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDLASKYFNDIHWRYIDHSSGLAPMQSFAFDDTFSESVGKDISCNVVRTWIHQHTVILGIHDSRLPFLKDGIQYLTDEIGYNAIVRNSGGLGVVLDQGVLNISLVFKGQTETTIDEAFTVMYLLICKMFENENVDIDTKEIEHSYCPGRFDLSIDGKKFAGISQRRVRGGIAVQIYLCVEGSGEERAEMMHEFYRRALKGEVTKFKYPDIKPECMASLETLLHRDIKVQDVMFQLLYAIKDLGGQLNMDPITEDEWQRYEGYFDKMIERNEKMNRSLD . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 7696 8532 . + . GCA_005502385.1_01249_mRNA GCA_005502385.1_01249 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDLASKYFNDIHWRYIDHSSGLAPMQSFAFDDTFSESVGKDISCNVVRTWIHQHTVILGIHDSRLPFLKDGIQYLTDEIGYNAIVRNSGGLGVVLDQGVLNISLVFKGQTETTIDEAFTVMYLLICKMFENENVDIDTKEIEHSYCPGRFDLSIDGKKFAGISQRRVRGGIAVQIYLCVEGSGEERAEMMHEFYRRALKGEVTKFKYPDIKPECMASLETLLHRDIKVQDVMFQLLYAIKDLGGQLNMDPITEDEWQRYEGYFDKMIERNEKMNRSLD . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 7696 8532 . + 0 GCA_005502385.1_01249 GCA_005502385.1_01249_gene,GCA_005502385.1_01249_mRNA GCA_005502385.1_01249 Octanoyl-[GcvH]:protein N-octanoyltransferase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDLASKYFNDIHWRYIDHSSGLAPMQSFAFDDTFSESVGKDISCNVVRTWIHQHTVILGIHDSRLPFLKDGIQYLTDEIGYNAIVRNSGGLGVVLDQGVLNISLVFKGQTETTIDEAFTVMYLLICKMFENENVDIDTKEIEHSYCPGRFDLSIDGKKFAGISQRRVRGGIAVQIYLCVEGSGEERAEMMHEFYRRALKGEVTKFKYPDIKPECMASLETLLHRDIKVQDVMFQLLYAIKDLGGQLNMDPITEDEWQRYEGYFDKMIERNEKMNRSLD persistent 278 lplA Octanoyl-[GcvH]:protein N-octanoyltransferase 2.3.1.204 COG0095,H WP_061815588.1 UPI0007657B6D UniRef100_UPI0007657B6D,UniRef50_Q2G0I9,UniRef90_A0A2A1K768 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 8945 9868 . + . GCA_005502385.1_01250_gene GCA_005502385.1_01250 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MVRRGYGESNGKIILIGEHAVTFGQPAIAIPFTSGKVKVLIESLEKGNYSAIQSDVYDGPLYDAPDHLKSLITHFVESKHVEEPLLIKIQANLPPSRGLGSSAAVAVAFIRASYDYLELPLSDEELLENADWAERIAHGKPSGIDTKTIVTNQPVWYQKGEVEILKSLDLDGYMVVIDTGVKGSTKQAVEDVHRLCDNDESYMNVIEHIGSLVYLASDAINHHSFDQLANIFNQCQDDLRTLTVSHDKIETLLEIGRQHGAVAGKLTGGGRGGSMLILTKEEVTAKTIVAAAEKAGAQHTWIEKLGG . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 8945 9868 . + . GCA_005502385.1_01250_mRNA GCA_005502385.1_01250 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MVRRGYGESNGKIILIGEHAVTFGQPAIAIPFTSGKVKVLIESLEKGNYSAIQSDVYDGPLYDAPDHLKSLITHFVESKHVEEPLLIKIQANLPPSRGLGSSAAVAVAFIRASYDYLELPLSDEELLENADWAERIAHGKPSGIDTKTIVTNQPVWYQKGEVEILKSLDLDGYMVVIDTGVKGSTKQAVEDVHRLCDNDESYMNVIEHIGSLVYLASDAINHHSFDQLANIFNQCQDDLRTLTVSHDKIETLLEIGRQHGAVAGKLTGGGRGGSMLILTKEEVTAKTIVAAAEKAGAQHTWIEKLGG . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 8945 9868 . + 0 GCA_005502385.1_01250 GCA_005502385.1_01250_gene,GCA_005502385.1_01250_mRNA GCA_005502385.1_01250 Galactokinase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MVRRGYGESNGKIILIGEHAVTFGQPAIAIPFTSGKVKVLIESLEKGNYSAIQSDVYDGPLYDAPDHLKSLITHFVESKHVEEPLLIKIQANLPPSRGLGSSAAVAVAFIRASYDYLELPLSDEELLENADWAERIAHGKPSGIDTKTIVTNQPVWYQKGEVEILKSLDLDGYMVVIDTGVKGSTKQAVEDVHRLCDNDESYMNVIEHIGSLVYLASDAINHHSFDQLANIFNQCQDDLRTLTVSHDKIETLLEIGRQHGAVAGKLTGGGRGGSMLILTKEEVTAKTIVAAAEKAGAQHTWIEKLGG persistent 307 mvk mevalonate kinase 2.7.1.36 GO:0004496,GO:0005524,GO:0005737,GO:0016126,GO:0019287 WP_049382089.1 UPI00066A34CC UniRef100_UPI00066A34CC,UniRef50_A0A2K4AEE5,UniRef90_A0A4Q9WRZ0 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 9873 10856 . + . GCA_005502385.1_01251_gene GCA_005502385.1_01251 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKSGKARAHTNIALIKYWGKADEDLIIPMNNSLSVTLERFYTETRVTFDASLTEDQLILNKEAVNAKESAKIQRYMDMIRKEAGISTYALIESDNFVPTAAGLASSASAYAALAGACNEALDLNLSDKDLSRLARRGSGSASRSIYGGFAEWEKGHDDKTSYAHQIESDGFENDLAMIFVVINNKSKKVSSRSGMSLTRETSRFYQYWLDHVEEDLKVTKQAIAQKDFKRMGEVIEANGLRMHATNLGAQPPFTYLVPESYEAMRIVHECREAGLPCYFTMDAGPNVKVLIEKKHQQAIVNQFLEVFNKEQIITSDITHAGVEIIK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 9873 10856 . + . GCA_005502385.1_01251_mRNA GCA_005502385.1_01251 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKSGKARAHTNIALIKYWGKADEDLIIPMNNSLSVTLERFYTETRVTFDASLTEDQLILNKEAVNAKESAKIQRYMDMIRKEAGISTYALIESDNFVPTAAGLASSASAYAALAGACNEALDLNLSDKDLSRLARRGSGSASRSIYGGFAEWEKGHDDKTSYAHQIESDGFENDLAMIFVVINNKSKKVSSRSGMSLTRETSRFYQYWLDHVEEDLKVTKQAIAQKDFKRMGEVIEANGLRMHATNLGAQPPFTYLVPESYEAMRIVHECREAGLPCYFTMDAGPNVKVLIEKKHQQAIVNQFLEVFNKEQIITSDITHAGVEIIK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 9873 10856 . + 0 GCA_005502385.1_01251 GCA_005502385.1_01251_gene,GCA_005502385.1_01251_mRNA GCA_005502385.1_01251 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKSGKARAHTNIALIKYWGKADEDLIIPMNNSLSVTLERFYTETRVTFDASLTEDQLILNKEAVNAKESAKIQRYMDMIRKEAGISTYALIESDNFVPTAAGLASSASAYAALAGACNEALDLNLSDKDLSRLARRGSGSASRSIYGGFAEWEKGHDDKTSYAHQIESDGFENDLAMIFVVINNKSKKVSSRSGMSLTRETSRFYQYWLDHVEEDLKVTKQAIAQKDFKRMGEVIEANGLRMHATNLGAQPPFTYLVPESYEAMRIVHECREAGLPCYFTMDAGPNVKVLIEKKHQQAIVNQFLEVFNKEQIITSDITHAGVEIIK persistent 327 mvaD diphosphomevalonate decarboxylase 4.1.1.33 GO:0004163,GO:0005829,GO:0019287 UniRef50_Q9FD68,UniRef90_A0A3S7GYJ5 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 10869 11945 . + . GCA_005502385.1_01252_gene GCA_005502385.1_01252 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIQAKAPGKLYIAGEYAVTEPGYKSVLIAVDRFVTAAIEASNEITGTIHSKTLHYKPVTFNRNEDKIEISDVHAANQLKYVVTAIEVFEQYAKSCNIKLKHFHLTIDSNLADASGQKYGLGSSAAVLVSVIKVLNEFYEMELSNLYIYKLAVISNMRLQSLSSCGDIAVSVYSGWLAYSTFDHEWVKQQMKETSVDEVLEKNWPGLHIEPLQAPENMEVLIGWTGSPASSPHLVSEVKRLKSDPIFYGKFLDQSNTCVENLIYAFKTNNIKGVQKMIRQNRSIIQQMDKEATVDIETKKLKLLCDIGERFGGAAKTSGAGGGDCGITIIDNRVDKHSIYEVWEKKGIKPLKFKIYHGQ . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 10869 11945 . + . GCA_005502385.1_01252_mRNA GCA_005502385.1_01252 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIQAKAPGKLYIAGEYAVTEPGYKSVLIAVDRFVTAAIEASNEITGTIHSKTLHYKPVTFNRNEDKIEISDVHAANQLKYVVTAIEVFEQYAKSCNIKLKHFHLTIDSNLADASGQKYGLGSSAAVLVSVIKVLNEFYEMELSNLYIYKLAVISNMRLQSLSSCGDIAVSVYSGWLAYSTFDHEWVKQQMKETSVDEVLEKNWPGLHIEPLQAPENMEVLIGWTGSPASSPHLVSEVKRLKSDPIFYGKFLDQSNTCVENLIYAFKTNNIKGVQKMIRQNRSIIQQMDKEATVDIETKKLKLLCDIGERFGGAAKTSGAGGGDCGITIIDNRVDKHSIYEVWEKKGIKPLKFKIYHGQ . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 10869 11945 . + 0 GCA_005502385.1_01252 GCA_005502385.1_01252_gene,GCA_005502385.1_01252_mRNA GCA_005502385.1_01252 Phosphomevalonate kinase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIQAKAPGKLYIAGEYAVTEPGYKSVLIAVDRFVTAAIEASNEITGTIHSKTLHYKPVTFNRNEDKIEISDVHAANQLKYVVTAIEVFEQYAKSCNIKLKHFHLTIDSNLADASGQKYGLGSSAAVLVSVIKVLNEFYEMELSNLYIYKLAVISNMRLQSLSSCGDIAVSVYSGWLAYSTFDHEWVKQQMKETSVDEVLEKNWPGLHIEPLQAPENMEVLIGWTGSPASSPHLVSEVKRLKSDPIFYGKFLDQSNTCVENLIYAFKTNNIKGVQKMIRQNRSIIQQMDKEATVDIETKKLKLLCDIGERFGGAAKTSGAGGGDCGITIIDNRVDKHSIYEVWEKKGIKPLKFKIYHGQ persistent 358 phosphomevalonate kinase 2.7.4.2 GO:0004631,GO:0016126,GO:0019287 WP_002488572.1 UPI00024E1B24 UniRef100_UPI00024E1B24,UniRef50_B9DKS0,UniRef90_A0A3S7GX98 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 12077 12463 . + . GCA_005502385.1_01253_gene GCA_005502385.1_01253 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEVNIRENNVKVGSEVKNKFLICDECQAVNLKSLKKKLEKLDPDAEIEIGCQSYCGPGRRKTFAFVNNRPLAALTEDELMEKVTAQLKKPRDPEEEERLRKRNEERKRRKEEQDRKLKEKLAKRKASK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 12077 12463 . + . GCA_005502385.1_01253_mRNA GCA_005502385.1_01253 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEVNIRENNVKVGSEVKNKFLICDECQAVNLKSLKKKLEKLDPDAEIEIGCQSYCGPGRRKTFAFVNNRPLAALTEDELMEKVTAQLKKPRDPEEEERLRKRNEERKRRKEEQDRKLKEKLAKRKASK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 12077 12463 . + 0 GCA_005502385.1_01253 GCA_005502385.1_01253_gene,GCA_005502385.1_01253_mRNA GCA_005502385.1_01253 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEVNIRENNVKVGSEVKNKFLICDECQAVNLKSLKKKLEKLDPDAEIEIGCQSYCGPGRRKTFAFVNNRPLAALTEDELMEKVTAQLKKPRDPEEEERLRKRNEERKRRKEEQDRKLKEKLAKRKASK persistent 128 DUF1450 domain-containing protein UniRef50_Q2G0I5,UniRef90_UPI0007DA3156 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 12527 13849 . - . GCA_005502385.1_01254_gene GCA_005502385.1_01254 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTHYNLIVIGFGKAGKTLAKYASSQGQQVALIEQFTESYGGTCINHGCIPSKVLVNDGIKHVDFSTAFSRKKEVVKALNQKNYLNLENDENITLLNFKAQFKSNTEVELIDENGKLVQTLTADKILINTGAKSNIPNIEGIDSAQNVYDSKGLLNISYQPKELVIIGGGYIALEFASMFQSFGTNVTVLEYNKQFMAREDQEIVTHMINDFKDKGVRLITNVETKALKNEGDLTTVETSQGNFTGDAILLATGRVPNTDLALDNTDIELGTHGEIKVNNHLQTSVSHIYAAGDVKGGLQFTYISLDDFRILKSELFGDRSRHTENRGTIPYTVFIDPPLSRVGMTALEAQKLNYNYVENTLFINTLPKHKINNDGRGLFKVIINKDNNEILGATLYGKGSEEIINLIKLAIDQHIPYQVLRDNIYTHPTIAESFNDLFNI . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 12527 13849 . - . GCA_005502385.1_01254_mRNA GCA_005502385.1_01254 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTHYNLIVIGFGKAGKTLAKYASSQGQQVALIEQFTESYGGTCINHGCIPSKVLVNDGIKHVDFSTAFSRKKEVVKALNQKNYLNLENDENITLLNFKAQFKSNTEVELIDENGKLVQTLTADKILINTGAKSNIPNIEGIDSAQNVYDSKGLLNISYQPKELVIIGGGYIALEFASMFQSFGTNVTVLEYNKQFMAREDQEIVTHMINDFKDKGVRLITNVETKALKNEGDLTTVETSQGNFTGDAILLATGRVPNTDLALDNTDIELGTHGEIKVNNHLQTSVSHIYAAGDVKGGLQFTYISLDDFRILKSELFGDRSRHTENRGTIPYTVFIDPPLSRVGMTALEAQKLNYNYVENTLFINTLPKHKINNDGRGLFKVIINKDNNEILGATLYGKGSEEIINLIKLAIDQHIPYQVLRDNIYTHPTIAESFNDLFNI . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 12527 13849 . - 0 GCA_005502385.1_01254 GCA_005502385.1_01254_gene,GCA_005502385.1_01254_mRNA GCA_005502385.1_01254 putative pyridine nucleotide-disulfide oxidoreductase RclA GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTHYNLIVIGFGKAGKTLAKYASSQGQQVALIEQFTESYGGTCINHGCIPSKVLVNDGIKHVDFSTAFSRKKEVVKALNQKNYLNLENDENITLLNFKAQFKSNTEVELIDENGKLVQTLTADKILINTGAKSNIPNIEGIDSAQNVYDSKGLLNISYQPKELVIIGGGYIALEFASMFQSFGTNVTVLEYNKQFMAREDQEIVTHMINDFKDKGVRLITNVETKALKNEGDLTTVETSQGNFTGDAILLATGRVPNTDLALDNTDIELGTHGEIKVNNHLQTSVSHIYAAGDVKGGLQFTYISLDDFRILKSELFGDRSRHTENRGTIPYTVFIDPPLSRVGMTALEAQKLNYNYVENTLFINTLPKHKINNDGRGLFKVIINKDNNEILGATLYGKGSEEIINLIKLAIDQHIPYQVLRDNIYTHPTIAESFNDLFNI persistent 440 merA hypothiocyanous acid reductase MerA GO:0016668,GO:0050660 WP_061815589.1 UPI0007651122 UniRef100_UPI0007651122,UniRef50_A0A266CGC0,UniRef90_A0A3S7GUG6 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 13836 14276 . - . GCA_005502385.1_01255_gene GCA_005502385.1_01255 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNLEFNIAVHVLCFLVKHDNQQFSSQTLAKLTCLNPVQLRRVTTVLNQYQFIKTSRGKNGGYSANHSTASIKLSVLYRIFVLEKDSQQRIFTGHEQSDCEISRNIAKTMSHYNQKEHRVILNFYDTLTINDVINDTLQEDTTYDTL . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 13836 14276 . - . GCA_005502385.1_01255_mRNA GCA_005502385.1_01255 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNLEFNIAVHVLCFLVKHDNQQFSSQTLAKLTCLNPVQLRRVTTVLNQYQFIKTSRGKNGGYSANHSTASIKLSVLYRIFVLEKDSQQRIFTGHEQSDCEISRNIAKTMSHYNQKEHRVILNFYDTLTINDVINDTLQEDTTYDTL . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 13836 14276 . - 0 GCA_005502385.1_01255 GCA_005502385.1_01255_gene,GCA_005502385.1_01255_mRNA GCA_005502385.1_01255 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNLEFNIAVHVLCFLVKHDNQQFSSQTLAKLTCLNPVQLRRVTTVLNQYQFIKTSRGKNGGYSANHSTASIKLSVLYRIFVLEKDSQQRIFTGHEQSDCEISRNIAKTMSHYNQKEHRVILNFYDTLTINDVINDTLQEDTTYDTL persistent 146 hypR redox-sensitive transcriptional regulator HypR WP_061815590.1 UPI0007656029 UniRef100_UPI0007656029,UniRef50_Q2G0I3,UniRef90_A0A4Q9WR76 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 14432 15367 . + . GCA_005502385.1_01256_gene GCA_005502385.1_01256 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAEFVQLGKSDVHVFPVALGANAVGGHNLYPNLDEEQGKDVVRKAIDNGITLIDTAFIYGPKRSEELVGEVVKEYPREKVQIATKGSHVIKDNGDVVQNNQPDYLKQQVEESLERLQVDYIDLYYIHFPDEDTPKDEAVAALQELKKEGKIKAIGVSNFTLDQLKEANKDGYVDVVQLEYNLLHRENEEVMKYAAENDITFVPYFPLASGILAGKYEENQTFDDHRATRRDFQPEVFNDNVRRVKELSSIAETHNTSIANIVLAFYLTRPSLDVVIPGAKRADQVVENIEAANIELTEEEIKKIDDLFPVE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 14432 15367 . + . GCA_005502385.1_01256_mRNA GCA_005502385.1_01256 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAEFVQLGKSDVHVFPVALGANAVGGHNLYPNLDEEQGKDVVRKAIDNGITLIDTAFIYGPKRSEELVGEVVKEYPREKVQIATKGSHVIKDNGDVVQNNQPDYLKQQVEESLERLQVDYIDLYYIHFPDEDTPKDEAVAALQELKKEGKIKAIGVSNFTLDQLKEANKDGYVDVVQLEYNLLHRENEEVMKYAAENDITFVPYFPLASGILAGKYEENQTFDDHRATRRDFQPEVFNDNVRRVKELSSIAETHNTSIANIVLAFYLTRPSLDVVIPGAKRADQVVENIEAANIELTEEEIKKIDDLFPVE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 14432 15367 . + 0 GCA_005502385.1_01256 GCA_005502385.1_01256_gene,GCA_005502385.1_01256_mRNA GCA_005502385.1_01256 Aldo-keto reductase IolS GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAEFVQLGKSDVHVFPVALGANAVGGHNLYPNLDEEQGKDVVRKAIDNGITLIDTAFIYGPKRSEELVGEVVKEYPREKVQIATKGSHVIKDNGDVVQNNQPDYLKQQVEESLERLQVDYIDLYYIHFPDEDTPKDEAVAALQELKKEGKIKAIGVSNFTLDQLKEANKDGYVDVVQLEYNLLHRENEEVMKYAAENDITFVPYFPLASGILAGKYEENQTFDDHRATRRDFQPEVFNDNVRRVKELSSIAETHNTSIANIVLAFYLTRPSLDVVIPGAKRADQVVENIEAANIELTEEEIKKIDDLFPVE persistent 311 Aldo/keto reductase 1.1.1.- WP_017176046.1 UPI0002DBE852 UniRef100_A0A4Q9WS92,UniRef50_P46336,UniRef90_A0A4Q9WS92 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 15516 16052 . + . GCA_005502385.1_01257_gene GCA_005502385.1_01257 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MITVLFGGSRPQGNTAQLTQYALEGKQYNWIDLTQYHFKPVRDYRHESKQIESYIDDYQLIIDQVLESDTVIFASPVYWYSVSASVKAFIDHWSESLIDPKYQDFKTKMSNIDFRLILVGGDCPKVKAKPCIKQLEYSLDFLGANLNGYIIGTAERPGDVMKDVYALERAQEWNAVLS . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 15516 16052 . + . GCA_005502385.1_01257_mRNA GCA_005502385.1_01257 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MITVLFGGSRPQGNTAQLTQYALEGKQYNWIDLTQYHFKPVRDYRHESKQIESYIDDYQLIIDQVLESDTVIFASPVYWYSVSASVKAFIDHWSESLIDPKYQDFKTKMSNIDFRLILVGGDCPKVKAKPCIKQLEYSLDFLGANLNGYIIGTAERPGDVMKDVYALERAQEWNAVLS . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 15516 16052 . + 0 GCA_005502385.1_01257 GCA_005502385.1_01257_gene,GCA_005502385.1_01257_mRNA GCA_005502385.1_01257 Putative NAD(P)H-dependent FMN-containing oxidoreductase YwqN GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MITVLFGGSRPQGNTAQLTQYALEGKQYNWIDLTQYHFKPVRDYRHESKQIESYIDDYQLIIDQVLESDTVIFASPVYWYSVSASVKAFIDHWSESLIDPKYQDFKTKMSNIDFRLILVGGDCPKVKAKPCIKQLEYSLDFLGANLNGYIIGTAERPGDVMKDVYALERAQEWNAVLS persistent 178 FMN-dependent NADPH-azoreductase WP_002488563.1 UPI00024E1B1F UniRef100_UPI00024E1B1F,UniRef50_A0A7U7PXP0,UniRef90_A0A4Q9WSF1 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 16147 16623 . + . GCA_005502385.1_01258_gene GCA_005502385.1_01258 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MYTVRKATTNDVIAIRDVATKAWYNTYLNIYAVSTINELLAASYNEHHLKKRLEDQLFLVVEENNEIVGFANFIYGKELYLAAHYVHPGVQHKGYGTSLLEEGLHEFENEYDTVFLEVDNKNKEAIHYYQHHGFEIVRSYQPEMYGEQLDLALMKKVL . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 16147 16623 . + . GCA_005502385.1_01258_mRNA GCA_005502385.1_01258 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MYTVRKATTNDVIAIRDVATKAWYNTYLNIYAVSTINELLAASYNEHHLKKRLEDQLFLVVEENNEIVGFANFIYGKELYLAAHYVHPGVQHKGYGTSLLEEGLHEFENEYDTVFLEVDNKNKEAIHYYQHHGFEIVRSYQPEMYGEQLDLALMKKVL . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 16147 16623 . + 0 GCA_005502385.1_01258 GCA_005502385.1_01258_gene,GCA_005502385.1_01258_mRNA GCA_005502385.1_01258 hypothetical protein """""" GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MYTVRKATTNDVIAIRDVATKAWYNTYLNIYAVSTINELLAASYNEHHLKKRLEDQLFLVVEENNEIVGFANFIYGKELYLAAHYVHPGVQHKGYGTSLLEEGLHEFENEYDTVFLEVDNKNKEAIHYYQHHGFEIVRSYQPEMYGEQLDLALMKKVL persistent 158 GNAT family N-acetyltransferase WP_002488589.1 UPI00024E1B1E UniRef100_A0A4Q9WR54,UniRef50_Q2G0G4,UniRef90_A0A4Q9WR54 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 16687 17985 . + . GCA_005502385.1_01259_gene GCA_005502385.1_01259 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTQSSYVTKKLAEEKVFKDPIHKYVHVKDQLIWDLIKTKEFQRLRRIKQLGTLYLAFHTAEHSRFGHSLGVYEIVRRMIDESFVGREAWNNKDRPLALCAALLHDLGHGPFSHSFEKIFNTDHEAFTQEIITGNTEVNEVLSRVSETFPQEVADVINKTHKNKLVISMISSQIDADRMDYLQRDAYFTGVSYGTFDMERILRLMRPSKDEVLIKESGMHAVENFIMSRYQMYWQIYFHPVSRGGEVLLNNCLKRVKQLYKEDYQFKMYPKEFIPFFEGTITIDQYVELDEVTVLFYLKKWIHEEDEILSDLARRFINRDLFKYIPFDGSIITITELQDLFIEGGIDPEYYFVSEAFSDLPYDYDRPGSNRQPIHLLRRNGSIKEISSQSLVISSITGINREDYKLYYPKEMILNIKDPEVKGSIINLLNELN . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 16687 17985 . + . GCA_005502385.1_01259_mRNA GCA_005502385.1_01259 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTQSSYVTKKLAEEKVFKDPIHKYVHVKDQLIWDLIKTKEFQRLRRIKQLGTLYLAFHTAEHSRFGHSLGVYEIVRRMIDESFVGREAWNNKDRPLALCAALLHDLGHGPFSHSFEKIFNTDHEAFTQEIITGNTEVNEVLSRVSETFPQEVADVINKTHKNKLVISMISSQIDADRMDYLQRDAYFTGVSYGTFDMERILRLMRPSKDEVLIKESGMHAVENFIMSRYQMYWQIYFHPVSRGGEVLLNNCLKRVKQLYKEDYQFKMYPKEFIPFFEGTITIDQYVELDEVTVLFYLKKWIHEEDEILSDLARRFINRDLFKYIPFDGSIITITELQDLFIEGGIDPEYYFVSEAFSDLPYDYDRPGSNRQPIHLLRRNGSIKEISSQSLVISSITGINREDYKLYYPKEMILNIKDPEVKGSIINLLNELN . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 16687 17985 . + 0 GCA_005502385.1_01259 GCA_005502385.1_01259_gene,GCA_005502385.1_01259_mRNA GCA_005502385.1_01259 hypothetical protein """""" GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTQSSYVTKKLAEEKVFKDPIHKYVHVKDQLIWDLIKTKEFQRLRRIKQLGTLYLAFHTAEHSRFGHSLGVYEIVRRMIDESFVGREAWNNKDRPLALCAALLHDLGHGPFSHSFEKIFNTDHEAFTQEIITGNTEVNEVLSRVSETFPQEVADVINKTHKNKLVISMISSQIDADRMDYLQRDAYFTGVSYGTFDMERILRLMRPSKDEVLIKESGMHAVENFIMSRYQMYWQIYFHPVSRGGEVLLNNCLKRVKQLYKEDYQFKMYPKEFIPFFEGTITIDQYVELDEVTVLFYLKKWIHEEDEILSDLARRFINRDLFKYIPFDGSIITITELQDLFIEGGIDPEYYFVSEAFSDLPYDYDRPGSNRQPIHLLRRNGSIKEISSQSLVISSITGINREDYKLYYPKEMILNIKDPEVKGSIINLLNELN persistent 432 HD domain-containing protein UniRef50_P39651,UniRef90_UPI0016431E2C . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 18058 18564 . + . GCA_005502385.1_01260_gene GCA_005502385.1_01260 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAENKGFKFNIIKNDPLDGHKGTNIGAISLDNIAPVFIDVANKEAFLDIGGMHARAEVEKGVKWITDKESVEGPEAKEYWLCWVTTERGENGPYYAGVTACYLLVNKSIRRGYKSMPEHVNMMDKSMKHQVIIDQIGEENKKILKDFLISHNETMWNNSNEALFKAFD . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 18058 18564 . + . GCA_005502385.1_01260_mRNA GCA_005502385.1_01260 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAENKGFKFNIIKNDPLDGHKGTNIGAISLDNIAPVFIDVANKEAFLDIGGMHARAEVEKGVKWITDKESVEGPEAKEYWLCWVTTERGENGPYYAGVTACYLLVNKSIRRGYKSMPEHVNMMDKSMKHQVIIDQIGEENKKILKDFLISHNETMWNNSNEALFKAFD . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 18058 18564 . + 0 GCA_005502385.1_01260 GCA_005502385.1_01260_gene,GCA_005502385.1_01260_mRNA GCA_005502385.1_01260 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAENKGFKFNIIKNDPLDGHKGTNIGAISLDNIAPVFIDVANKEAFLDIGGMHARAEVEKGVKWITDKESVEGPEAKEYWLCWVTTERGENGPYYAGVTACYLLVNKSIRRGYKSMPEHVNMMDKSMKHQVIIDQIGEENKKILKDFLISHNETMWNNSNEALFKAFD persistent 168 Cytosolic protein WP_002488571.1 UPI00024E1B1C UniRef100_UPI00024E1B1C,UniRef50_A0A0U1MGP2,UniRef90_A0A6N0I3A0 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 18786 19004 . + . GCA_005502385.1_01261_gene GCA_005502385.1_01261 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MVDHIEDVLEDAKRAGAEPLSETHDNSTYEDTKGSKSVYIKAPFNVLIELQAIPNGYYYREDSEAKVFIPGK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 18786 19004 . + . GCA_005502385.1_01261_mRNA GCA_005502385.1_01261 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MVDHIEDVLEDAKRAGAEPLSETHDNSTYEDTKGSKSVYIKAPFNVLIELQAIPNGYYYREDSEAKVFIPGK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 18786 19004 . + 0 GCA_005502385.1_01261 GCA_005502385.1_01261_gene,GCA_005502385.1_01261_mRNA GCA_005502385.1_01261 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MVDHIEDVLEDAKRAGAEPLSETHDNSTYEDTKGSKSVYIKAPFNVLIELQAIPNGYYYREDSEAKVFIPGK shell 72 glyoxalase/bleomycin resistance/dioxygenase family protein WP_049379665.1 UPI00066A36B0 UniRef100_UPI00066A36B0,UniRef50_UPI00066A36B0,UniRef90_UPI00066A36B0 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 19111 19251 . + . GCA_005502385.1_01262_gene GCA_005502385.1_01262 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKNILLFVASIGFGIIFFYKYRTLLEKYHYDIVELESETDILERKK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 19111 19251 . + . GCA_005502385.1_01262_mRNA GCA_005502385.1_01262 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKNILLFVASIGFGIIFFYKYRTLLEKYHYDIVELESETDILERKK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 19111 19251 . + 0 GCA_005502385.1_01262 GCA_005502385.1_01262_gene,GCA_005502385.1_01262_mRNA GCA_005502385.1_01262 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKNILLFVASIGFGIIFFYKYRTLLEKYHYDIVELESETDILERKK persistent 46 hypothetical protein UniRef50_A0A8X8GP30,UniRef90_A0A8X8GP30 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 19531 19986 . + . GCA_005502385.1_01263_gene GCA_005502385.1_01263 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MWCNILKIKVSHTLDKNIHIQTKQVLKQNGEKQTFEFSSQGSWQQKHADYIRYQEQIESAVVNVTIKIEDNGVKLIRKGDINMNLHFVEGKDTTTLYTIPAGRIPLIVRTKSILHFVNENGGKLKIQYELHQNDEKMGSYQYEIKYKEIGE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 19531 19986 . + . GCA_005502385.1_01263_mRNA GCA_005502385.1_01263 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MWCNILKIKVSHTLDKNIHIQTKQVLKQNGEKQTFEFSSQGSWQQKHADYIRYQEQIESAVVNVTIKIEDNGVKLIRKGDINMNLHFVEGKDTTTLYTIPAGRIPLIVRTKSILHFVNENGGKLKIQYELHQNDEKMGSYQYEIKYKEIGE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 19531 19986 . + 0 GCA_005502385.1_01263 GCA_005502385.1_01263_gene,GCA_005502385.1_01263_mRNA GCA_005502385.1_01263 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MWCNILKIKVSHTLDKNIHIQTKQVLKQNGEKQTFEFSSQGSWQQKHADYIRYQEQIESAVVNVTIKIEDNGVKLIRKGDINMNLHFVEGKDTTTLYTIPAGRIPLIVRTKSILHFVNENGGKLKIQYELHQNDEKMGSYQYEIKYKEIGE persistent 151 DUF1934 domain-containing protein UniRef50_A0A0D0SIW2,UniRef90_A0AAE5JLW7 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 19983 21644 . + . GCA_005502385.1_01264_gene GCA_005502385.1_01264 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNIIEKVKKTLIQEIEASIKKANLAEDIPEIKVEIPKDTKNGDYSTNIAMVLTKIAKRNPRDIAQAIVDNLDTSKANVKQVDIAGPGFINFYLDNQYLTAVISEAIQKGDKFGYAEEPKNKKILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYDVTREYYINDAGNQITNLARSIETRFFEALGDTSHEMPADGYNGKDIVEIGKDLAKKHPEMKDYSDEERLKTFRQLGVDYEMDKLKKDLSDFNVHFDNWFSETSLYENGAIDNTLEKMHELGYTYEADGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEKGIEIDKNADFSTITNEKAIDLLKKVAEFEPTIESAAESRAPHRLTNYIQDLASAFHKFYNAEKVLSDDIEKTKAHVALIEAVKITLHNALALVGVSAPESM . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 19983 21644 . + . GCA_005502385.1_01264_mRNA GCA_005502385.1_01264 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNIIEKVKKTLIQEIEASIKKANLAEDIPEIKVEIPKDTKNGDYSTNIAMVLTKIAKRNPRDIAQAIVDNLDTSKANVKQVDIAGPGFINFYLDNQYLTAVISEAIQKGDKFGYAEEPKNKKILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYDVTREYYINDAGNQITNLARSIETRFFEALGDTSHEMPADGYNGKDIVEIGKDLAKKHPEMKDYSDEERLKTFRQLGVDYEMDKLKKDLSDFNVHFDNWFSETSLYENGAIDNTLEKMHELGYTYEADGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEKGIEIDKNADFSTITNEKAIDLLKKVAEFEPTIESAAESRAPHRLTNYIQDLASAFHKFYNAEKVLSDDIEKTKAHVALIEAVKITLHNALALVGVSAPESM . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 19983 21644 . + 0 GCA_005502385.1_01264 GCA_005502385.1_01264_gene,GCA_005502385.1_01264_mRNA GCA_005502385.1_01264 Arginine--tRNA ligase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNIIEKVKKTLIQEIEASIKKANLAEDIPEIKVEIPKDTKNGDYSTNIAMVLTKIAKRNPRDIAQAIVDNLDTSKANVKQVDIAGPGFINFYLDNQYLTAVISEAIQKGDKFGYAEEPKNKKILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYDVTREYYINDAGNQITNLARSIETRFFEALGDTSHEMPADGYNGKDIVEIGKDLAKKHPEMKDYSDEERLKTFRQLGVDYEMDKLKKDLSDFNVHFDNWFSETSLYENGAIDNTLEKMHELGYTYEADGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEKGIEIDKNADFSTITNEKAIDLLKKVAEFEPTIESAAESRAPHRLTNYIQDLASAFHKFYNAEKVLSDDIEKTKAHVALIEAVKITLHNALALVGVSAPESM persistent 553 argS arginine--tRNA ligase 6.1.1.19 GO:0004814,GO:0005524,GO:0005737,GO:0006420 COG0018,J WP_002448884.1 UPI00019FCA86 UniRef100_A0A2A1MF27,UniRef50_P46906,UniRef90_Q8CTN9 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 21724 22371 . + . GCA_005502385.1_01265_gene GCA_005502385.1_01265 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSMMTTEQLYKALLKHMGPQGWWPADTREEMILGAILVQNTNWNNAALSLRRLKEATHFEPQNILNLPIEELKILIRSSGFYNNKSKAISTLFNWLNQYQFDYCKINEVYGEHLRNELLKLHGIGSETADVLLVYIFERVEFIPDHYTRRLYKKLGYANTENYDKLKRYVELPSNFTNQDANEFHALLDNFGKNYFNGSIEQRYHFLDQYFTKMD . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 21724 22371 . + . GCA_005502385.1_01265_mRNA GCA_005502385.1_01265 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSMMTTEQLYKALLKHMGPQGWWPADTREEMILGAILVQNTNWNNAALSLRRLKEATHFEPQNILNLPIEELKILIRSSGFYNNKSKAISTLFNWLNQYQFDYCKINEVYGEHLRNELLKLHGIGSETADVLLVYIFERVEFIPDHYTRRLYKKLGYANTENYDKLKRYVELPSNFTNQDANEFHALLDNFGKNYFNGSIEQRYHFLDQYFTKMD . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 21724 22371 . + 0 GCA_005502385.1_01265 GCA_005502385.1_01265_gene,GCA_005502385.1_01265_mRNA GCA_005502385.1_01265 Endonuclease III GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSMMTTEQLYKALLKHMGPQGWWPADTREEMILGAILVQNTNWNNAALSLRRLKEATHFEPQNILNLPIEELKILIRSSGFYNNKSKAISTLFNWLNQYQFDYCKINEVYGEHLRNELLKLHGIGSETADVLLVYIFERVEFIPDHYTRRLYKKLGYANTENYDKLKRYVELPSNFTNQDANEFHALLDNFGKNYFNGSIEQRYHFLDQYFTKMD persistent 215 Endonuclease III domain-containing protein WP_017176039.1 UPI0002E4AD97 UniRef100_A0A6N0I3C5,UniRef50_A0A0R2GA19,UniRef90_A0A6N0I3C5 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 22462 23223 . + . GCA_005502385.1_01266_gene GCA_005502385.1_01266 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MENQAYFTPNDVSQITEVTKRTLHYYHEIELLVPTYIASNGYRYYSSKDISKLQTIQFLRELNLSLADIQLYFSNSIEEKNIILENNYQRIVAQRDQLNKMIHFLNHHLVNHRKEEINMSKWNNDNIQNQYEKEAEMKYSHTPYYQAFKENQKRLNSTEKQQNNKKTMERLHLFFDKMNELFIANYKINHIQVKQAIFELKDILRTQVPNVDEQFLEYIASIYENDERFAKTINNKRHDNLNQYIADAIRNDI . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 22462 23223 . + . GCA_005502385.1_01266_mRNA GCA_005502385.1_01266 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MENQAYFTPNDVSQITEVTKRTLHYYHEIELLVPTYIASNGYRYYSSKDISKLQTIQFLRELNLSLADIQLYFSNSIEEKNIILENNYQRIVAQRDQLNKMIHFLNHHLVNHRKEEINMSKWNNDNIQNQYEKEAEMKYSHTPYYQAFKENQKRLNSTEKQQNNKKTMERLHLFFDKMNELFIANYKINHIQVKQAIFELKDILRTQVPNVDEQFLEYIASIYENDERFAKTINNKRHDNLNQYIADAIRNDI . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 22462 23223 . + 0 GCA_005502385.1_01266 GCA_005502385.1_01266_gene,GCA_005502385.1_01266_mRNA GCA_005502385.1_01266 HTH-type transcriptional activator TipA GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MENQAYFTPNDVSQITEVTKRTLHYYHEIELLVPTYIASNGYRYYSSKDISKLQTIQFLRELNLSLADIQLYFSNSIEEKNIILENNYQRIVAQRDQLNKMIHFLNHHLVNHRKEEINMSKWNNDNIQNQYEKEAEMKYSHTPYYQAFKENQKRLNSTEKQQNNKKTMERLHLFFDKMNELFIANYKINHIQVKQAIFELKDILRTQVPNVDEQFLEYIASIYENDERFAKTINNKRHDNLNQYIADAIRNDI persistent 253 merR MerR family transcriptional regulator WP_049382093.1 UPI00066E1D4B UniRef100_UPI00066E1D4B,UniRef50_A0A380G3B0,UniRef90_A0A3S7GUF4 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 23299 23802 . + . GCA_005502385.1_01267_gene GCA_005502385.1_01267 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIEAFKLFWQNYFNIKSRTRRRHYWFAILANCIILVIMSLLFNIITLGLNGGHTFFDIVYEIIDIIIFIGTFTMTVRRLHDTGHTMVLPLIILIFTSIRKISSIVDSTYGISIDGFFNGMIALELGIMVAAMSLVLLIILVITFAFTIKDSDEGTNKYGPNPKIATV . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 23299 23802 . + . GCA_005502385.1_01267_mRNA GCA_005502385.1_01267 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIEAFKLFWQNYFNIKSRTRRRHYWFAILANCIILVIMSLLFNIITLGLNGGHTFFDIVYEIIDIIIFIGTFTMTVRRLHDTGHTMVLPLIILIFTSIRKISSIVDSTYGISIDGFFNGMIALELGIMVAAMSLVLLIILVITFAFTIKDSDEGTNKYGPNPKIATV . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 23299 23802 . + 0 GCA_005502385.1_01267 GCA_005502385.1_01267_gene,GCA_005502385.1_01267_mRNA GCA_005502385.1_01267 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIEAFKLFWQNYFNIKSRTRRRHYWFAILANCIILVIMSLLFNIITLGLNGGHTFFDIVYEIIDIIIFIGTFTMTVRRLHDTGHTMVLPLIILIFTSIRKISSIVDSTYGISIDGFFNGMIALELGIMVAAMSLVLLIILVITFAFTIKDSDEGTNKYGPNPKIATV persistent 167 DUF805 domain-containing protein WP_137689580.1 UPI0010F5D186 UniRef100_UPI0010F5D186,UniRef50_Q4L428,UniRef90_A0A6N0I368 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 24006 24926 . + . GCA_005502385.1_01268_gene GCA_005502385.1_01268 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNNKKLWIILFTLVLVLAACGQNQSSEKGHHSTHSTEQKTTDHNNNTHTYHRIISLIPSNTEILYRLGLGKNIIGVSTVDDYPKNVKKGKQQFDAMNLNKEALLKAKPDLILAHESQKSSAKKTLDSLADSGVKVVYVKDAQSLNQVYDSFEQVGKVTHREKEAKQLVKETKDNVQKVIESIPAHHKKQSVFIEVSSKPEIYTAGKETFFNDMIEKLDTKNVFSNVSGWKAVDKESIIRKNPDILISTEGISKEEYYEVIKERDGFSEVNAVKNERVETVNGDEISRPGPRIDEGMKELRDAIYKR . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 24006 24926 . + . GCA_005502385.1_01268_mRNA GCA_005502385.1_01268 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNNKKLWIILFTLVLVLAACGQNQSSEKGHHSTHSTEQKTTDHNNNTHTYHRIISLIPSNTEILYRLGLGKNIIGVSTVDDYPKNVKKGKQQFDAMNLNKEALLKAKPDLILAHESQKSSAKKTLDSLADSGVKVVYVKDAQSLNQVYDSFEQVGKVTHREKEAKQLVKETKDNVQKVIESIPAHHKKQSVFIEVSSKPEIYTAGKETFFNDMIEKLDTKNVFSNVSGWKAVDKESIIRKNPDILISTEGISKEEYYEVIKERDGFSEVNAVKNERVETVNGDEISRPGPRIDEGMKELRDAIYKR . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 24006 24926 . + 0 GCA_005502385.1_01268 GCA_005502385.1_01268_gene,GCA_005502385.1_01268_mRNA GCA_005502385.1_01268 Vitamin B12-binding protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNNKKLWIILFTLVLVLAACGQNQSSEKGHHSTHSTEQKTTDHNNNTHTYHRIISLIPSNTEILYRLGLGKNIIGVSTVDDYPKNVKKGKQQFDAMNLNKEALLKAKPDLILAHESQKSSAKKTLDSLADSGVKVVYVKDAQSLNQVYDSFEQVGKVTHREKEAKQLVKETKDNVQKVIESIPAHHKKQSVFIEVSSKPEIYTAGKETFFNDMIEKLDTKNVFSNVSGWKAVDKESIIRKNPDILISTEGISKEEYYEVIKERDGFSEVNAVKNERVETVNGDEISRPGPRIDEGMKELRDAIYKR persistent 306 ABC transporter substrate-binding protein WP_048682710.1 UPI000660411E UniRef100_A0A8I0WAF3,UniRef50_A0A380G1W9,UniRef90_A0A3S7GUD3 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 25117 26073 . + . GCA_005502385.1_01269_gene GCA_005502385.1_01269 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKRHLYLTFSVWTLCLCIIIAISLFWGLGSLHQAFNQMIFFKVRVPRTFEALMVGAILTLTGQLFQTVLNNPLADSFTLGLASGATFGSSLAIFLGVSFLFIPIFSIIFSITTLLLVVIMTIVLSRNFPIRVLIISGLMVGAFFNALIYILTLIKPERTNRMLAYYFGGFANAEMNELVYITMVSLPIIIVIYSLVTPIKLLQLGEAKSKSLGLNVQWITFIVLLLTSIMTAIAVAFIGVIGFIGIIVPQLIRRYYFQYSLAIQMTLNILIGALTMLFADVVGKIVINPVQIPASIILSLVGIPILFYILVTQSNTTR . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 25117 26073 . + . GCA_005502385.1_01269_mRNA GCA_005502385.1_01269 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKRHLYLTFSVWTLCLCIIIAISLFWGLGSLHQAFNQMIFFKVRVPRTFEALMVGAILTLTGQLFQTVLNNPLADSFTLGLASGATFGSSLAIFLGVSFLFIPIFSIIFSITTLLLVVIMTIVLSRNFPIRVLIISGLMVGAFFNALIYILTLIKPERTNRMLAYYFGGFANAEMNELVYITMVSLPIIIVIYSLVTPIKLLQLGEAKSKSLGLNVQWITFIVLLLTSIMTAIAVAFIGVIGFIGIIVPQLIRRYYFQYSLAIQMTLNILIGALTMLFADVVGKIVINPVQIPASIILSLVGIPILFYILVTQSNTTR . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 25117 26073 . + 0 GCA_005502385.1_01269 GCA_005502385.1_01269_gene,GCA_005502385.1_01269_mRNA GCA_005502385.1_01269 putative ABC transporter permease protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKRHLYLTFSVWTLCLCIIIAISLFWGLGSLHQAFNQMIFFKVRVPRTFEALMVGAILTLTGQLFQTVLNNPLADSFTLGLASGATFGSSLAIFLGVSFLFIPIFSIIFSITTLLLVVIMTIVLSRNFPIRVLIISGLMVGAFFNALIYILTLIKPERTNRMLAYYFGGFANAEMNELVYITMVSLPIIIVIYSLVTPIKLLQLGEAKSKSLGLNVQWITFIVLLLTSIMTAIAVAFIGVIGFIGIIVPQLIRRYYFQYSLAIQMTLNILIGALTMLFADVVGKIVINPVQIPASIILSLVGIPILFYILVTQSNTTR persistent 318 Iron ABC transporter permease WP_017176035.1 UPI0002FC3A80 UniRef100_A0A6N0I3I8,UniRef50_A0A1D4I031,UniRef90_A0A6N0I3I8 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 26132 26836 . + . GCA_005502385.1_01270_gene GCA_005502385.1_01270 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDLSQIKAVVFDLEGTLLDRTKSRDKFIEEQYERFHDYFVHVQLADFKHKFIELDDDEDNDKPYVYKEIIKQFHIDRLKWKDLFHDFEMHFYRYVFPYYDTLYTLEKLSEHDYLLGVIANGKSKIKQFRIYSLGIEHVINYLSTSETVGYRKPHPRIFEDMIDQLGVLPEEIMYVGDDALNDVAPARAMGMVSVWYKQENAELEPLEEEVDYIITTIEELLTILSINKQKKGDN . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 26132 26836 . + . GCA_005502385.1_01270_mRNA GCA_005502385.1_01270 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDLSQIKAVVFDLEGTLLDRTKSRDKFIEEQYERFHDYFVHVQLADFKHKFIELDDDEDNDKPYVYKEIIKQFHIDRLKWKDLFHDFEMHFYRYVFPYYDTLYTLEKLSEHDYLLGVIANGKSKIKQFRIYSLGIEHVINYLSTSETVGYRKPHPRIFEDMIDQLGVLPEEIMYVGDDALNDVAPARAMGMVSVWYKQENAELEPLEEEVDYIITTIEELLTILSINKQKKGDN . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 26132 26836 . + 0 GCA_005502385.1_01270 GCA_005502385.1_01270_gene,GCA_005502385.1_01270_mRNA GCA_005502385.1_01270 (S)-2-haloacid dehalogenase 4A GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDLSQIKAVVFDLEGTLLDRTKSRDKFIEEQYERFHDYFVHVQLADFKHKFIELDDDEDNDKPYVYKEIIKQFHIDRLKWKDLFHDFEMHFYRYVFPYYDTLYTLEKLSEHDYLLGVIANGKSKIKQFRIYSLGIEHVINYLSTSETVGYRKPHPRIFEDMIDQLGVLPEEIMYVGDDALNDVAPARAMGMVSVWYKQENAELEPLEEEVDYIITTIEELLTILSINKQKKGDN persistent 234 HAD family hydrolase WP_017176034.1 UPI0002FFD439 UniRef100_A0A4Q9WUV0,UniRef50_A0A380G976,UniRef90_A0A4Q9WUV0 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 26837 27631 . + . GCA_005502385.1_01271_gene GCA_005502385.1_01271 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MELFTRKGGFTLNYNTMGQGYPVVLVHTAFENASIFQNLAHALSKTFQVVLLDLRGHGYSDKPRHIKFNEFADDIILLLDYLYIDQAAFIGHEMGATIIAHLSKQYPEYVSSLTMINPTSIEGELPEERLFRKYAHKIRNWNEDKQEKFLDKHRYYKHRKVNKFLKNVEDTNSISTKEETEAVDEVFKQRGIAEVFEYITKPTFIVASAYGERITSLESKEVADLIGNVHFEVYSKSSMYPFEEEQEKFIHDVTPFIKKHMPQH . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 26837 27631 . + . GCA_005502385.1_01271_mRNA GCA_005502385.1_01271 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MELFTRKGGFTLNYNTMGQGYPVVLVHTAFENASIFQNLAHALSKTFQVVLLDLRGHGYSDKPRHIKFNEFADDIILLLDYLYIDQAAFIGHEMGATIIAHLSKQYPEYVSSLTMINPTSIEGELPEERLFRKYAHKIRNWNEDKQEKFLDKHRYYKHRKVNKFLKNVEDTNSISTKEETEAVDEVFKQRGIAEVFEYITKPTFIVASAYGERITSLESKEVADLIGNVHFEVYSKSSMYPFEEEQEKFIHDVTPFIKKHMPQH . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 26837 27631 . + 0 GCA_005502385.1_01271 GCA_005502385.1_01271_gene,GCA_005502385.1_01271_mRNA GCA_005502385.1_01271 Putative aminoacrylate hydrolase RutD GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MELFTRKGGFTLNYNTMGQGYPVVLVHTAFENASIFQNLAHALSKTFQVVLLDLRGHGYSDKPRHIKFNEFADDIILLLDYLYIDQAAFIGHEMGATIIAHLSKQYPEYVSSLTMINPTSIEGELPEERLFRKYAHKIRNWNEDKQEKFLDKHRYYKHRKVNKFLKNVEDTNSISTKEETEAVDEVFKQRGIAEVFEYITKPTFIVASAYGERITSLESKEVADLIGNVHFEVYSKSSMYPFEEEQEKFIHDVTPFIKKHMPQH persistent 264 Alpha/beta hydrolase WP_017176033.1 UPI0002FA899D UniRef100_A0A3S7GU11,UniRef50_A0A4V6Z249,UniRef90_A0A3S7GU11 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 27764 28270 . + . GCA_005502385.1_01272_gene GCA_005502385.1_01272 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKLATALLVSGLVMTGVGYNHAEAASGNSIQTVQQLTQGQKTLENVTIGESIKNVINHYGTPIYSYNPNNQEKYYEFHTNKGVLVVTAIGKKNTGYVTRVSMTYNQANGPTYQKVAQSVGKKAIKRVQYNSVSGNFAYIQNGKTSYQFGSSSPKDKVLKLYRIDINK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 27764 28270 . + . GCA_005502385.1_01272_mRNA GCA_005502385.1_01272 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKLATALLVSGLVMTGVGYNHAEAASGNSIQTVQQLTQGQKTLENVTIGESIKNVINHYGTPIYSYNPNNQEKYYEFHTNKGVLVVTAIGKKNTGYVTRVSMTYNQANGPTYQKVAQSVGKKAIKRVQYNSVSGNFAYIQNGKTSYQFGSSSPKDKVLKLYRIDINK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 27764 28270 . + 0 GCA_005502385.1_01272 GCA_005502385.1_01272_gene,GCA_005502385.1_01272_mRNA GCA_005502385.1_01272 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKLATALLVSGLVMTGVGYNHAEAASGNSIQTVQQLTQGQKTLENVTIGESIKNVINHYGTPIYSYNPNNQEKYYEFHTNKGVLVVTAIGKKNTGYVTRVSMTYNQANGPTYQKVAQSVGKKAIKRVQYNSVSGNFAYIQNGKTSYQFGSSSPKDKVLKLYRIDINK persistent 168 SA0570 family protein WP_002448912.1 UPI00019FCA8E UniRef100_A0A974KYN9,UniRef50_Q49VF9,UniRef90_A0A974KYN9 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 28476 29192 . + . GCA_005502385.1_01273_gene GCA_005502385.1_01273 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRSNDKVLLENVNDYFTHKGMPPKLIDDIKENIRNDFKKSEEKKQDYLDFRGKSTAQIILIIQRNLFGLQLNPIIFFIINFILISYLYDKQYVPFQAATILSLFYCIVIFPITIFIHIQIARKKYLYSNRTEIIIGYMIAIIALILIIMRAFNLTIGIVPITMYSHQFIFFMGLIMSLCGVIFKRLEYTAVGLLFSQKTIDAVIVNSNVAQTVSLIIWIIIVVLIVTYTIRLSSRRSI . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 28476 29192 . + . GCA_005502385.1_01273_mRNA GCA_005502385.1_01273 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRSNDKVLLENVNDYFTHKGMPPKLIDDIKENIRNDFKKSEEKKQDYLDFRGKSTAQIILIIQRNLFGLQLNPIIFFIINFILISYLYDKQYVPFQAATILSLFYCIVIFPITIFIHIQIARKKYLYSNRTEIIIGYMIAIIALILIIMRAFNLTIGIVPITMYSHQFIFFMGLIMSLCGVIFKRLEYTAVGLLFSQKTIDAVIVNSNVAQTVSLIIWIIIVVLIVTYTIRLSSRRSI . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 28476 29192 . + 0 GCA_005502385.1_01273 GCA_005502385.1_01273_gene,GCA_005502385.1_01273_mRNA GCA_005502385.1_01273 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRSNDKVLLENVNDYFTHKGMPPKLIDDIKENIRNDFKKSEEKKQDYLDFRGKSTAQIILIIQRNLFGLQLNPIIFFIINFILISYLYDKQYVPFQAATILSLFYCIVIFPITIFIHIQIARKKYLYSNRTEIIIGYMIAIIALILIIMRAFNLTIGIVPITMYSHQFIFFMGLIMSLCGVIFKRLEYTAVGLLFSQKTIDAVIVNSNVAQTVSLIIWIIIVVLIVTYTIRLSSRRSI persistent 238 DUF1129 domain-containing protein WP_019834891.1 UPI000361C8CD UniRef100_A0A8I1BF66,UniRef50_Q5HRC1,UniRef90_A0A8I1BF66 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 29351 30166 . + . GCA_005502385.1_01274_gene GCA_005502385.1_01274 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKIETSNQIKIAYQDAGTGIPVILIHGLDGNLAGFYSLKKELKKHYRVIVYDVRGHGKSTHPTSYNLNDHIKDLIMLMQQLGIKSAHLLGHDMGGIIAQAFTEKYKEKVRSLTIISSKSEDIVHGFTKLMIEHQDKVAGFNKSEALLILFPYIYKKSDVAMKWFQRQRLYSKQDDEDSAVASRALLDTENQSNTVTHDINVPTMIVEGRYDPIIINKENQQFENQFKNINYVLFNDSGHAPHIEEEEKFLTLYLNFVEKNDASHTTNLLI . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 29351 30166 . + . GCA_005502385.1_01274_mRNA GCA_005502385.1_01274 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKIETSNQIKIAYQDAGTGIPVILIHGLDGNLAGFYSLKKELKKHYRVIVYDVRGHGKSTHPTSYNLNDHIKDLIMLMQQLGIKSAHLLGHDMGGIIAQAFTEKYKEKVRSLTIISSKSEDIVHGFTKLMIEHQDKVAGFNKSEALLILFPYIYKKSDVAMKWFQRQRLYSKQDDEDSAVASRALLDTENQSNTVTHDINVPTMIVEGRYDPIIINKENQQFENQFKNINYVLFNDSGHAPHIEEEEKFLTLYLNFVEKNDASHTTNLLI . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 29351 30166 . + 0 GCA_005502385.1_01274 GCA_005502385.1_01274_gene,GCA_005502385.1_01274_mRNA GCA_005502385.1_01274 Lipase 3 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKIETSNQIKIAYQDAGTGIPVILIHGLDGNLAGFYSLKKELKKHYRVIVYDVRGHGKSTHPTSYNLNDHIKDLIMLMQQLGIKSAHLLGHDMGGIIAQAFTEKYKEKVRSLTIISSKSEDIVHGFTKLMIEHQDKVAGFNKSEALLILFPYIYKKSDVAMKWFQRQRLYSKQDDEDSAVASRALLDTENQSNTVTHDINVPTMIVEGRYDPIIINKENQQFENQFKNINYVLFNDSGHAPHIEEEEKFLTLYLNFVEKNDASHTTNLLI persistent 271 Alpha/beta hydrolase WP_049413752.1 UPI00066E5C40 UniRef100_UPI002553F5C5,UniRef50_Q2G0F0,UniRef90_A0A3S7GX77 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 30412 30786 . - . GCA_005502385.1_01275_gene GCA_005502385.1_01275 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAISKINDCFELLAMITYADKLKSIIKKEFSISFEEFAVLTYISQSKEEEYYLKDIINHLNYKQPQVVKAVKNLSQEDYFDKKRNEHDERTVLILVNATQRTKIDELLNRVNKRIEEANKETEL . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 30412 30786 . - . GCA_005502385.1_01275_mRNA GCA_005502385.1_01275 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAISKINDCFELLAMITYADKLKSIIKKEFSISFEEFAVLTYISQSKEEEYYLKDIINHLNYKQPQVVKAVKNLSQEDYFDKKRNEHDERTVLILVNATQRTKIDELLNRVNKRIEEANKETEL . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 30412 30786 . - 0 GCA_005502385.1_01275 GCA_005502385.1_01275_gene,GCA_005502385.1_01275_mRNA GCA_005502385.1_01275 Transcriptional regulator SarA GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAISKINDCFELLAMITYADKLKSIIKKEFSISFEEFAVLTYISQSKEEEYYLKDIINHLNYKQPQVVKAVKNLSQEDYFDKKRNEHDERTVLILVNATQRTKIDELLNRVNKRIEEANKETEL persistent 124 sarA global transcriptional regulator SarA COG1846,K WP_002448898.1 UPI00019FCA91 UniRef100_A0A2A1MCX7,UniRef50_Q2G2U9,UniRef90_A0A2A1MCX7 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 31102 32040 . - . GCA_005502385.1_01276_gene GCA_005502385.1_01276 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKFLSPLPILVTLLLLLIISFGFYIYSKIPKTTHLSKIETMTVKPHYSLSFQGVQQAKQSYILYYEPSLGISSDILVKNNETISKDTPIFKYYNPHIEKHILAKKNLLSSIQHSNKISSDNFNQQVQLSNDILNLQQQLQTRIYAPIKGRVTVLHPFPSKSHTEIMQINSDERIIRAKINESQLKQLKNNQLVQVSIKDTRQFEGKILSISSIPYKTESSFSFYNVDISTDPSYPIGYHFDLHLGTTEYELPNKVIYNKNYVLVIHNKKIIKRNIKYIKSKKSGYIMVSNGLNIGDKIITHPSTSLLESTE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 31102 32040 . - . GCA_005502385.1_01276_mRNA GCA_005502385.1_01276 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKFLSPLPILVTLLLLLIISFGFYIYSKIPKTTHLSKIETMTVKPHYSLSFQGVQQAKQSYILYYEPSLGISSDILVKNNETISKDTPIFKYYNPHIEKHILAKKNLLSSIQHSNKISSDNFNQQVQLSNDILNLQQQLQTRIYAPIKGRVTVLHPFPSKSHTEIMQINSDERIIRAKINESQLKQLKNNQLVQVSIKDTRQFEGKILSISSIPYKTESSFSFYNVDISTDPSYPIGYHFDLHLGTTEYELPNKVIYNKNYVLVIHNKKIIKRNIKYIKSKKSGYIMVSNGLNIGDKIITHPSTSLLESTE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 31102 32040 . - 0 GCA_005502385.1_01276 GCA_005502385.1_01276_gene,GCA_005502385.1_01276_mRNA GCA_005502385.1_01276 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKFLSPLPILVTLLLLLIISFGFYIYSKIPKTTHLSKIETMTVKPHYSLSFQGVQQAKQSYILYYEPSLGISSDILVKNNETISKDTPIFKYYNPHIEKHILAKKNLLSSIQHSNKISSDNFNQQVQLSNDILNLQQQLQTRIYAPIKGRVTVLHPFPSKSHTEIMQINSDERIIRAKINESQLKQLKNNQLVQVSIKDTRQFEGKILSISSIPYKTESSFSFYNVDISTDPSYPIGYHFDLHLGTTEYELPNKVIYNKNYVLVIHNKKIIKRNIKYIKSKKSGYIMVSNGLNIGDKIITHPSTSLLESTE persistent 312 hlyD HlyD family efflux transporter periplasmic adaptor subunit UniRef50_A0A3S7GUE5,UniRef90_A0A3S7GUE5 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 32188 33114 . - . GCA_005502385.1_01277_gene GCA_005502385.1_01277 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLFLFVLGIIAGMMVPIQTSINSRLGRFTESSFYVSTISFFVGTLFLLILNIIFNIQMFSSSFYAGHSIDYHWWVGGLLGVWFLTGNLLLLPRLGAALTVVMTVAGQIIMGVMIDTLGLLGANQTSFTFLKGVGIIVLLFGILLMNHIPKNKLKDKRNISLYIWLFIGFIFGFAPPLQTTINSGLSKQMHSSLFAALVSFTVGTIALFILTIIFNRSLKIKLSQHHFDRIKPLYFIGGILGVVFVTSNIILMPYLGAALTTIVAMLGQMIMGVIIDHFGIGVPKNEMTFRKFIGLIAIAIGIVLLRLF . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 32188 33114 . - . GCA_005502385.1_01277_mRNA GCA_005502385.1_01277 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLFLFVLGIIAGMMVPIQTSINSRLGRFTESSFYVSTISFFVGTLFLLILNIIFNIQMFSSSFYAGHSIDYHWWVGGLLGVWFLTGNLLLLPRLGAALTVVMTVAGQIIMGVMIDTLGLLGANQTSFTFLKGVGIIVLLFGILLMNHIPKNKLKDKRNISLYIWLFIGFIFGFAPPLQTTINSGLSKQMHSSLFAALVSFTVGTIALFILTIIFNRSLKIKLSQHHFDRIKPLYFIGGILGVVFVTSNIILMPYLGAALTTIVAMLGQMIMGVIIDHFGIGVPKNEMTFRKFIGLIAIAIGIVLLRLF . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 32188 33114 . - 0 GCA_005502385.1_01277 GCA_005502385.1_01277_gene,GCA_005502385.1_01277_mRNA GCA_005502385.1_01277 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLFLFVLGIIAGMMVPIQTSINSRLGRFTESSFYVSTISFFVGTLFLLILNIIFNIQMFSSSFYAGHSIDYHWWVGGLLGVWFLTGNLLLLPRLGAALTVVMTVAGQIIMGVMIDTLGLLGANQTSFTFLKGVGIIVLLFGILLMNHIPKNKLKDKRNISLYIWLFIGFIFGFAPPLQTTINSGLSKQMHSSLFAALVSFTVGTIALFILTIIFNRSLKIKLSQHHFDRIKPLYFIGGILGVVFVTSNIILMPYLGAALTTIVAMLGQMIMGVIIDHFGIGVPKNEMTFRKFIGLIAIAIGIVLLRLF persistent 308 DMT family transporter UniRef50_Q2G2U7,UniRef90_A0A974KXI4 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 33295 33516 . - . GCA_005502385.1_01278_gene GCA_005502385.1_01278 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSKTLELIFKTNLNKTAKLQLPQISATITEANVQSAMENIIKLDVLRFTSGAPSKVASAQIVDKTTTVLFELN . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 33295 33516 . - . GCA_005502385.1_01278_mRNA GCA_005502385.1_01278 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSKTLELIFKTNLNKTAKLQLPQISATITEANVQSAMENIIKLDVLRFTSGAPSKVASAQIVDKTTTVLFELN . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 33295 33516 . - 0 GCA_005502385.1_01278 GCA_005502385.1_01278_gene,GCA_005502385.1_01278_mRNA GCA_005502385.1_01278 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSKTLELIFKTNLNKTAKLQLPQISATITEANVQSAMENIIKLDVLRFTSGAPSKVASAQIVDKTTTVLFELN persistent 73 DUF2922 domain-containing protein WP_017176027.1 UPI0002ECF4E6 UniRef100_A0A4Q9WSG8,UniRef50_A0A2A1K953,UniRef90_A0AAE5JN17 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 33549 33755 . - . GCA_005502385.1_01279_gene GCA_005502385.1_01279 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNEITQLSVICTHVTHDTNGKAKEIKRRFNNINTRASEADIKSFVTTISNLIEESFDKVEVVKTQGLV . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 33549 33755 . - . GCA_005502385.1_01279_mRNA GCA_005502385.1_01279 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNEITQLSVICTHVTHDTNGKAKEIKRRFNNINTRASEADIKSFVTTISNLIEESFDKVEVVKTQGLV . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 33549 33755 . - 0 GCA_005502385.1_01279 GCA_005502385.1_01279_gene,GCA_005502385.1_01279_mRNA GCA_005502385.1_01279 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNEITQLSVICTHVTHDTNGKAKEIKRRFNNINTRASEADIKSFVTTISNLIEESFDKVEVVKTQGLV persistent 68 DUF1659 domain-containing protein WP_002448893.1 UPI00019FCB6B UniRef100_A0A1L8Y692,UniRef50_A0A2A1K600,UniRef90_A0A1L8Y692 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 33898 34455 . + . GCA_005502385.1_01280_gene GCA_005502385.1_01280 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNYVEPIKKKNDIKKMYHVLQMKSDRDYLLFKLAIHTGMRLTDLLHLKVEDIKNKENKEIKTAWIQQSAPFIKIMIPSDLRNEIDTYIYENQLKDDHLLFQSLRTHKELSRQQAYRIIHHAAKELGLLHIGLTTLRKTFAYHAYKSGISIAIIQKYLGHQTTHETLKFIGLSPKEDHHTIIALNL . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 33898 34455 . + . GCA_005502385.1_01280_mRNA GCA_005502385.1_01280 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNYVEPIKKKNDIKKMYHVLQMKSDRDYLLFKLAIHTGMRLTDLLHLKVEDIKNKENKEIKTAWIQQSAPFIKIMIPSDLRNEIDTYIYENQLKDDHLLFQSLRTHKELSRQQAYRIIHHAAKELGLLHIGLTTLRKTFAYHAYKSGISIAIIQKYLGHQTTHETLKFIGLSPKEDHHTIIALNL . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 33898 34455 . + 0 GCA_005502385.1_01280 GCA_005502385.1_01280_gene,GCA_005502385.1_01280_mRNA GCA_005502385.1_01280 Tyrosine recombinase XerC GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNYVEPIKKKNDIKKMYHVLQMKSDRDYLLFKLAIHTGMRLTDLLHLKVEDIKNKENKEIKTAWIQQSAPFIKIMIPSDLRNEIDTYIYENQLKDDHLLFQSLRTHKELSRQQAYRIIHHAAKELGLLHIGLTTLRKTFAYHAYKSGISIAIIQKYLGHQTTHETLKFIGLSPKEDHHTIIALNL persistent 185 Integrase WP_017176026.1 UPI0002D79586 UniRef100_A0A3S7GXT6,UniRef50_S2XMX6,UniRef90_A0A3S7GXT6 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 34470 36872 . + . GCA_005502385.1_01281_gene GCA_005502385.1_01281 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSLIYLLGALLLIIGMVLITLFIRPLRRYAGYISLFAPVIASVYFLSQIPSVLHQKVISFKLAWMPAIDLNLDLRLDGLGLMFALIISIIGIAVFFYATQYLTPNGDNLPRFFIYLLLFMFSMLGIVISNNTILMYIFWELTSVSSFLLISYWYSNANSQLGAIQSFMITVFGGLALLTGFIMLYIMTGTNTITEILSQSHHISEQPLFIPMIIMMLIGAFTKSAQFPFHIWLPKAMAAPTPVSAYLHSATMVKAGIFLLFRFTPVLGLSNSYIYIVTFVGLITMMFGSLTALRQYDLKGILAYSTVSQLGMIMTMVGLGGGIAQHPSGPMAKIYTLVLFAGLFHVMNHALFKCTLFMGVGIIDHEAGTRDIKKLNGMRKFFPKMHVSMTLAALSMAGVPFLNGFLSKEMFFDSLVKSIELEQFSLTLTIIIVALGVIASIFTFVYAVYMLKETYWGEFNEKEVPKKHIHEPWLFSLPAMIFAVMLPVIFFIPNTFTHPIVLPALRNVTNLGIQVDKMAPHVSQWHGINLPLIFSIIVIILGIILATKVNWKVLTHRLIKTASITNSYRKAYSVFEHYAGCSIRGVMTNRLNYYNVITLLVFSLFVAYGFLRVGFPKLHLMHVTDFGPLEVLIAISISVVGIALVFIRQRLTMVILNGIIGYSVALFYLIMRAPDLALTQLVVETMTTILFIVSFSRLPNISRKKADKKKEMMKIVVAFIFAGAVVTLVFMAQQGDGLETISKYYMNAKELTGGKNIVNAILGDFRALDTMFEGLVLIIAGLGIYTLLNYKDRRGQDERK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 34470 36872 . + . GCA_005502385.1_01281_mRNA GCA_005502385.1_01281 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSLIYLLGALLLIIGMVLITLFIRPLRRYAGYISLFAPVIASVYFLSQIPSVLHQKVISFKLAWMPAIDLNLDLRLDGLGLMFALIISIIGIAVFFYATQYLTPNGDNLPRFFIYLLLFMFSMLGIVISNNTILMYIFWELTSVSSFLLISYWYSNANSQLGAIQSFMITVFGGLALLTGFIMLYIMTGTNTITEILSQSHHISEQPLFIPMIIMMLIGAFTKSAQFPFHIWLPKAMAAPTPVSAYLHSATMVKAGIFLLFRFTPVLGLSNSYIYIVTFVGLITMMFGSLTALRQYDLKGILAYSTVSQLGMIMTMVGLGGGIAQHPSGPMAKIYTLVLFAGLFHVMNHALFKCTLFMGVGIIDHEAGTRDIKKLNGMRKFFPKMHVSMTLAALSMAGVPFLNGFLSKEMFFDSLVKSIELEQFSLTLTIIIVALGVIASIFTFVYAVYMLKETYWGEFNEKEVPKKHIHEPWLFSLPAMIFAVMLPVIFFIPNTFTHPIVLPALRNVTNLGIQVDKMAPHVSQWHGINLPLIFSIIVIILGIILATKVNWKVLTHRLIKTASITNSYRKAYSVFEHYAGCSIRGVMTNRLNYYNVITLLVFSLFVAYGFLRVGFPKLHLMHVTDFGPLEVLIAISISVVGIALVFIRQRLTMVILNGIIGYSVALFYLIMRAPDLALTQLVVETMTTILFIVSFSRLPNISRKKADKKKEMMKIVVAFIFAGAVVTLVFMAQQGDGLETISKYYMNAKELTGGKNIVNAILGDFRALDTMFEGLVLIIAGLGIYTLLNYKDRRGQDERK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 34470 36872 . + 0 GCA_005502385.1_01281 GCA_005502385.1_01281_gene,GCA_005502385.1_01281_mRNA GCA_005502385.1_01281 Na(+)/H(+) antiporter subunit A GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSLIYLLGALLLIIGMVLITLFIRPLRRYAGYISLFAPVIASVYFLSQIPSVLHQKVISFKLAWMPAIDLNLDLRLDGLGLMFALIISIIGIAVFFYATQYLTPNGDNLPRFFIYLLLFMFSMLGIVISNNTILMYIFWELTSVSSFLLISYWYSNANSQLGAIQSFMITVFGGLALLTGFIMLYIMTGTNTITEILSQSHHISEQPLFIPMIIMMLIGAFTKSAQFPFHIWLPKAMAAPTPVSAYLHSATMVKAGIFLLFRFTPVLGLSNSYIYIVTFVGLITMMFGSLTALRQYDLKGILAYSTVSQLGMIMTMVGLGGGIAQHPSGPMAKIYTLVLFAGLFHVMNHALFKCTLFMGVGIIDHEAGTRDIKKLNGMRKFFPKMHVSMTLAALSMAGVPFLNGFLSKEMFFDSLVKSIELEQFSLTLTIIIVALGVIASIFTFVYAVYMLKETYWGEFNEKEVPKKHIHEPWLFSLPAMIFAVMLPVIFFIPNTFTHPIVLPALRNVTNLGIQVDKMAPHVSQWHGINLPLIFSIIVIILGIILATKVNWKVLTHRLIKTASITNSYRKAYSVFEHYAGCSIRGVMTNRLNYYNVITLLVFSLFVAYGFLRVGFPKLHLMHVTDFGPLEVLIAISISVVGIALVFIRQRLTMVILNGIIGYSVALFYLIMRAPDLALTQLVVETMTTILFIVSFSRLPNISRKKADKKKEMMKIVVAFIFAGAVVTLVFMAQQGDGLETISKYYMNAKELTGGKNIVNAILGDFRALDTMFEGLVLIIAGLGIYTLLNYKDRRGQDERK persistent 800 DUF4040 domain-containing protein UniRef50_Q2G2U8,UniRef90_A0A3S7GTZ9 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 36859 37284 . + . GCA_005502385.1_01282_gene GCA_005502385.1_01282 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKENDVVLKTVTKIVVFILLTFGFYIYLAGHNNPGGGFIGGLVFSSAFILMFLAFDVKKVLDSLPIDFRKLMIIGALISLITAIAPTFFGKSFLYQSEFTLHLPIFNEMHITTVTIFELGIVLSVVGVIVTIMLALSGGKS . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 36859 37284 . + . GCA_005502385.1_01282_mRNA GCA_005502385.1_01282 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKENDVVLKTVTKIVVFILLTFGFYIYLAGHNNPGGGFIGGLVFSSAFILMFLAFDVKKVLDSLPIDFRKLMIIGALISLITAIAPTFFGKSFLYQSEFTLHLPIFNEMHITTVTIFELGIVLSVVGVIVTIMLALSGGKS . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 36859 37284 . + 0 GCA_005502385.1_01282 GCA_005502385.1_01282_gene,GCA_005502385.1_01282_mRNA GCA_005502385.1_01282 Na(+)/H(+) antiporter subunit B GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKENDVVLKTVTKIVVFILLTFGFYIYLAGHNNPGGGFIGGLVFSSAFILMFLAFDVKKVLDSLPIDFRKLMIIGALISLITAIAPTFFGKSFLYQSEFTLHLPIFNEMHITTVTIFELGIVLSVVGVIVTIMLALSGGKS persistent 141 mnhB2 Na+/H+ antiporter Mnh2 subunit B WP_002455676.1 UPI0001EF54D2 UniRef100_A0A1L8Y652,UniRef50_Q49VH0,UniRef90_A0A974QNC7 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 37281 37628 . + . GCA_005502385.1_01283_gene GCA_005502385.1_01283 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNLILLLIIGFLVFLATYMILSLNLIRIIVGISIYTHAGNLIIMSMGHYSDHVTEPLIRGSNTNYVDPLLQALVLTAIVIGFGMTAFLLVLVYRTYRVTKESEIDVLREDEDDEQ . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 37281 37628 . + . GCA_005502385.1_01283_mRNA GCA_005502385.1_01283 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNLILLLIIGFLVFLATYMILSLNLIRIIVGISIYTHAGNLIIMSMGHYSDHVTEPLIRGSNTNYVDPLLQALVLTAIVIGFGMTAFLLVLVYRTYRVTKESEIDVLREDEDDEQ . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 37281 37628 . + 0 GCA_005502385.1_01283 GCA_005502385.1_01283_gene,GCA_005502385.1_01283_mRNA GCA_005502385.1_01283 Na(+)/H(+) antiporter subunit C1 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNLILLLIIGFLVFLATYMILSLNLIRIIVGISIYTHAGNLIIMSMGHYSDHVTEPLIRGSNTNYVDPLLQALVLTAIVIGFGMTAFLLVLVYRTYRVTKESEIDVLREDEDDEQ persistent 115 mnhC2 Na+/H+ antiporter Mnh2 subunit C WP_002448875.1 UPI00019FCB6F UniRef100_A0A1L8Y665,UniRef50_Q2G213,UniRef90_A0A1L8Y665 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 37618 39117 . + . GCA_005502385.1_01284_gene GCA_005502385.1_01284 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNSNLLILPILLPLLCALLLVFTKNKNRVSKILYIGTMTVNTLISLALLIYVMNHKPITLDFGGWKAPFGIQFLGDTLSLLMVTVASFVVTLIMAYGFGPAEKRVNRYYLPTFILFLTTGVIGAFLTSDLFNLYVMFEIMLLASFVLVTLGQSIEQLRAAIIYVVLNIIGSWLFLLGIGLLYKLVGTLNFSQVALRLDDIHNNEMVVVIAIVFMIAFGSKASLVLFMWLPKAYAVLNTELAALFAALMTKVGAYALIRFFTLLFDQHPNITHPILVFMSCITMIIGAFGVIAFKDIKKIAAYQVILSIGFIILGLGSNTFAGIHGAIFYLTNDIVVKTLLFFIIGSLVYMSGYREYKYLYGLAKREPFFGVAFIVMIFAIGGVPPFSGFPGKVLIFQGAVQNGNYIGLALMILTSLLAMYSLFRILFIMYFGDADGEQVDYNPLPAHRKGMIGILTVVVLVMGLAAPIVMNVTKNATELNTNDAYFHHLVNPHLKEENK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 37618 39117 . + . GCA_005502385.1_01284_mRNA GCA_005502385.1_01284 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNSNLLILPILLPLLCALLLVFTKNKNRVSKILYIGTMTVNTLISLALLIYVMNHKPITLDFGGWKAPFGIQFLGDTLSLLMVTVASFVVTLIMAYGFGPAEKRVNRYYLPTFILFLTTGVIGAFLTSDLFNLYVMFEIMLLASFVLVTLGQSIEQLRAAIIYVVLNIIGSWLFLLGIGLLYKLVGTLNFSQVALRLDDIHNNEMVVVIAIVFMIAFGSKASLVLFMWLPKAYAVLNTELAALFAALMTKVGAYALIRFFTLLFDQHPNITHPILVFMSCITMIIGAFGVIAFKDIKKIAAYQVILSIGFIILGLGSNTFAGIHGAIFYLTNDIVVKTLLFFIIGSLVYMSGYREYKYLYGLAKREPFFGVAFIVMIFAIGGVPPFSGFPGKVLIFQGAVQNGNYIGLALMILTSLLAMYSLFRILFIMYFGDADGEQVDYNPLPAHRKGMIGILTVVVLVMGLAAPIVMNVTKNATELNTNDAYFHHLVNPHLKEENK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 37618 39117 . + 0 GCA_005502385.1_01284 GCA_005502385.1_01284_gene,GCA_005502385.1_01284_mRNA GCA_005502385.1_01284 Na(+)/H(+) antiporter subunit D1 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNSNLLILPILLPLLCALLLVFTKNKNRVSKILYIGTMTVNTLISLALLIYVMNHKPITLDFGGWKAPFGIQFLGDTLSLLMVTVASFVVTLIMAYGFGPAEKRVNRYYLPTFILFLTTGVIGAFLTSDLFNLYVMFEIMLLASFVLVTLGQSIEQLRAAIIYVVLNIIGSWLFLLGIGLLYKLVGTLNFSQVALRLDDIHNNEMVVVIAIVFMIAFGSKASLVLFMWLPKAYAVLNTELAALFAALMTKVGAYALIRFFTLLFDQHPNITHPILVFMSCITMIIGAFGVIAFKDIKKIAAYQVILSIGFIILGLGSNTFAGIHGAIFYLTNDIVVKTLLFFIIGSLVYMSGYREYKYLYGLAKREPFFGVAFIVMIFAIGGVPPFSGFPGKVLIFQGAVQNGNYIGLALMILTSLLAMYSLFRILFIMYFGDADGEQVDYNPLPAHRKGMIGILTVVVLVMGLAAPIVMNVTKNATELNTNDAYFHHLVNPHLKEENK persistent 499 mnhD2 Na+/H+ antiporter Mnh2 subunit D GO:0008137,GO:0042773 WP_025987150.1 UPI0003A6628A UniRef100_UPI0003A6628A,UniRef50_Q0Q2J7,UniRef90_A0A3S7GXW8 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 39114 39596 . + . GCA_005502385.1_01285_gene GCA_005502385.1_01285 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRQIVLNILIAFLWVLFQDQGSFLFSTFVSGYLIGLIIIYILHRFFGQEYYLVKIWIAIKFLGIYLYQLITSSLSIIKYILFKTKDMNPGLLTYETELKSDWAITFLTILIIITPGSTVIRISKLTNKFFIHSIDISENEKANLLKSIKQYERLIMEVSR . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 39114 39596 . + . GCA_005502385.1_01285_mRNA GCA_005502385.1_01285 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRQIVLNILIAFLWVLFQDQGSFLFSTFVSGYLIGLIIIYILHRFFGQEYYLVKIWIAIKFLGIYLYQLITSSLSIIKYILFKTKDMNPGLLTYETELKSDWAITFLTILIIITPGSTVIRISKLTNKFFIHSIDISENEKANLLKSIKQYERLIMEVSR . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 39114 39596 . + 0 GCA_005502385.1_01285 GCA_005502385.1_01285_gene,GCA_005502385.1_01285_mRNA GCA_005502385.1_01285 Na(+)/H(+) antiporter subunit E GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRQIVLNILIAFLWVLFQDQGSFLFSTFVSGYLIGLIIIYILHRFFGQEYYLVKIWIAIKFLGIYLYQLITSSLSIIKYILFKTKDMNPGLLTYETELKSDWAITFLTILIIITPGSTVIRISKLTNKFFIHSIDISENEKANLLKSIKQYERLIMEVSR persistent 160 mnhE2 Na+/H+ antiporter Mnh2 subunit E UniRef50_Q2G210,UniRef90_A0A3S7GX66 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 39593 39895 . + . GCA_005502385.1_01286_gene GCA_005502385.1_01286 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIQAMTNFFSTGALILFGIAFIIGLFRLIKGPTTADRVVAFDAASAVIMCIVGVVSVIYDTDAYLDSIMLIAIISFVSSVSISRFIGGGRVFNGTHKKRH . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 39593 39895 . + . GCA_005502385.1_01286_mRNA GCA_005502385.1_01286 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIQAMTNFFSTGALILFGIAFIIGLFRLIKGPTTADRVVAFDAASAVIMCIVGVVSVIYDTDAYLDSIMLIAIISFVSSVSISRFIGGGRVFNGTHKKRH . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 39593 39895 . + 0 GCA_005502385.1_01286 GCA_005502385.1_01286_gene,GCA_005502385.1_01286_mRNA GCA_005502385.1_01286 Na(+)/H(+) antiporter subunit F GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIQAMTNFFSTGALILFGIAFIIGLFRLIKGPTTADRVVAFDAASAVIMCIVGVVSVIYDTDAYLDSIMLIAIISFVSSVSISRFIGGGRVFNGTHKKRH persistent 100 mnhF2 Na+/H+ antiporter Mnh2 subunit F WP_017176022.1 UPI00031B8C33 UniRef100_A0A1J6EMB6,UniRef50_P0C948,UniRef90_A0A657ZTG0 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 39870 40370 . + . GCA_005502385.1_01287_gene GCA_005502385.1_01287 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MELIKSVTELIASILIFLGSIIAVISAIGIVKFQDVFLRSHASTKSSTLSVLLTLIGALIYFTTVQGFFSVRLLLSIVFINLTSPVGMHLVARAAYRTGAYMYRKDDAPRQSSILLSSKEFNTTDELKSRAKKREEQREKLYYDIKKHRAEERKQHGDKNIEDLEE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 39870 40370 . + . GCA_005502385.1_01287_mRNA GCA_005502385.1_01287 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MELIKSVTELIASILIFLGSIIAVISAIGIVKFQDVFLRSHASTKSSTLSVLLTLIGALIYFTTVQGFFSVRLLLSIVFINLTSPVGMHLVARAAYRTGAYMYRKDDAPRQSSILLSSKEFNTTDELKSRAKKREEQREKLYYDIKKHRAEERKQHGDKNIEDLEE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 39870 40370 . + 0 GCA_005502385.1_01287 GCA_005502385.1_01287_gene,GCA_005502385.1_01287_mRNA GCA_005502385.1_01287 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MELIKSVTELIASILIFLGSIIAVISAIGIVKFQDVFLRSHASTKSSTLSVLLTLIGALIYFTTVQGFFSVRLLLSIVFINLTSPVGMHLVARAAYRTGAYMYRKDDAPRQSSILLSSKEFNTTDELKSRAKKREEQREKLYYDIKKHRAEERKQHGDKNIEDLEE persistent 166 Na+/H+ antiporter subunit G WP_019834899.1 UPI000377B3C5 UniRef100_UPI000377B3C5,UniRef50_Q49VH5,UniRef90_A0A974KXG7 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 40564 42603 . + . GCA_005502385.1_01288_gene GCA_005502385.1_01288 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEIFETILIFLAVVIVSSFVHTFIPKVPLAFIQIILGMILFILPVPVEFNFDSELFMLATIAPLLFVEGVNVSRVHLRRYIKPVMLMALGLVITTVIGVGLFIHLVWPDLPIGAAFAIAAILCPTDAPAVQAITQGKVLPKGAMTILEGESLLNDAAGIISFKIAVGVLVTGAFSLFEAIQQFLIASIGGAIVGLLIGILLVRFRLTLTRRGIENINMFVFLQLLTPFVTYLVAELFHASGIIAAVVAGLVHGFERDRIAQTRTRLQLSYNHTWNILGYALNGFVFSILGFLVPEVIVKIIKSEPHNLLFLIGITLLVALAVYVFRFIWVYVLYPLFYLSVSPFQKLMNDDGTNTKEKPPKRSMYALIMTFCGVHGTISLAIALTLPYYLENHESFKYRNDLLFISSGMVILSLVIAQIILPFVTKNAPPPKIGSMNFKEARIYILEHVIDYLNKRSSFETSYRYGNVIKEYHDKLTFLKSVEKDDENSKELERLQRIAFNVETKTLEKLADEGEITESMLENYMRFAERTQVYRQASLIRRIIVGIRGLLLKRHIRTRTNAASSLSVTENLMELSKINKRVHYNVVSRLVKEANEDNKLEVGMICDGYLMRIDNLSPSNFFNTRSEDSITKIKLNALREQRRILTELISDEEITEATALKLREAINYDEMVIVDSLTD . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 40564 42603 . + . GCA_005502385.1_01288_mRNA GCA_005502385.1_01288 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEIFETILIFLAVVIVSSFVHTFIPKVPLAFIQIILGMILFILPVPVEFNFDSELFMLATIAPLLFVEGVNVSRVHLRRYIKPVMLMALGLVITTVIGVGLFIHLVWPDLPIGAAFAIAAILCPTDAPAVQAITQGKVLPKGAMTILEGESLLNDAAGIISFKIAVGVLVTGAFSLFEAIQQFLIASIGGAIVGLLIGILLVRFRLTLTRRGIENINMFVFLQLLTPFVTYLVAELFHASGIIAAVVAGLVHGFERDRIAQTRTRLQLSYNHTWNILGYALNGFVFSILGFLVPEVIVKIIKSEPHNLLFLIGITLLVALAVYVFRFIWVYVLYPLFYLSVSPFQKLMNDDGTNTKEKPPKRSMYALIMTFCGVHGTISLAIALTLPYYLENHESFKYRNDLLFISSGMVILSLVIAQIILPFVTKNAPPPKIGSMNFKEARIYILEHVIDYLNKRSSFETSYRYGNVIKEYHDKLTFLKSVEKDDENSKELERLQRIAFNVETKTLEKLADEGEITESMLENYMRFAERTQVYRQASLIRRIIVGIRGLLLKRHIRTRTNAASSLSVTENLMELSKINKRVHYNVVSRLVKEANEDNKLEVGMICDGYLMRIDNLSPSNFFNTRSEDSITKIKLNALREQRRILTELISDEEITEATALKLREAINYDEMVIVDSLTD . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 40564 42603 . + 0 GCA_005502385.1_01288 GCA_005502385.1_01288_gene,GCA_005502385.1_01288_mRNA GCA_005502385.1_01288 Sodium%2C potassium%2C lithium and rubidium/H(+) antiporter GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEIFETILIFLAVVIVSSFVHTFIPKVPLAFIQIILGMILFILPVPVEFNFDSELFMLATIAPLLFVEGVNVSRVHLRRYIKPVMLMALGLVITTVIGVGLFIHLVWPDLPIGAAFAIAAILCPTDAPAVQAITQGKVLPKGAMTILEGESLLNDAAGIISFKIAVGVLVTGAFSLFEAIQQFLIASIGGAIVGLLIGILLVRFRLTLTRRGIENINMFVFLQLLTPFVTYLVAELFHASGIIAAVVAGLVHGFERDRIAQTRTRLQLSYNHTWNILGYALNGFVFSILGFLVPEVIVKIIKSEPHNLLFLIGITLLVALAVYVFRFIWVYVLYPLFYLSVSPFQKLMNDDGTNTKEKPPKRSMYALIMTFCGVHGTISLAIALTLPYYLENHESFKYRNDLLFISSGMVILSLVIAQIILPFVTKNAPPPKIGSMNFKEARIYILEHVIDYLNKRSSFETSYRYGNVIKEYHDKLTFLKSVEKDDENSKELERLQRIAFNVETKTLEKLADEGEITESMLENYMRFAERTQVYRQASLIRRIIVGIRGLLLKRHIRTRTNAASSLSVTENLMELSKINKRVHYNVVSRLVKEANEDNKLEVGMICDGYLMRIDNLSPSNFFNTRSEDSITKIKLNALREQRRILTELISDEEITEATALKLREAINYDEMVIVDSLTD persistent 679 Sodium:proton antiporter WP_019834900.1 UPI0003779F61 UniRef100_UPI0003779F61,UniRef50_Q2FVI0,UniRef90_A0A8X8KID9 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 42785 43432 . + . GCA_005502385.1_01289_gene GCA_005502385.1_01289 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLTEEKEDYLKAILTNGGDSAFVSNKILSQYLDIKPPSVSEMVSRLEKAGFVETKHYKGVKLSEEGLSHTLDIIKRHRLLEQFLIEVLNYNWEEVHQEAEILEHKISDLFLERIDKLLNYPETCPHGGVIPRNHVYKEKYNDSLLEYDEGDMVNIKRVRDKTDLLVYLSSKHISIGDNIEIVSKDKTNKVMIINNDTTMTILSYDNAMNIFVEKN . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 42785 43432 . + . GCA_005502385.1_01289_mRNA GCA_005502385.1_01289 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLTEEKEDYLKAILTNGGDSAFVSNKILSQYLDIKPPSVSEMVSRLEKAGFVETKHYKGVKLSEEGLSHTLDIIKRHRLLEQFLIEVLNYNWEEVHQEAEILEHKISDLFLERIDKLLNYPETCPHGGVIPRNHVYKEKYNDSLLEYDEGDMVNIKRVRDKTDLLVYLSSKHISIGDNIEIVSKDKTNKVMIINNDTTMTILSYDNAMNIFVEKN . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 42785 43432 . + 0 GCA_005502385.1_01289 GCA_005502385.1_01289_gene,GCA_005502385.1_01289_mRNA GCA_005502385.1_01289 HTH-type transcriptional regulator MntR GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLTEEKEDYLKAILTNGGDSAFVSNKILSQYLDIKPPSVSEMVSRLEKAGFVETKHYKGVKLSEEGLSHTLDIIKRHRLLEQFLIEVLNYNWEEVHQEAEILEHKISDLFLERIDKLLNYPETCPHGGVIPRNHVYKEKYNDSLLEYDEGDMVNIKRVRDKTDLLVYLSSKHISIGDNIEIVSKDKTNKVMIINNDTTMTILSYDNAMNIFVEKN persistent 215 Manganese transport regulator WP_072291403.1 UPI000913C80F UniRef100_UPI000913C80F,UniRef50_Q5HRA0,UniRef90_A0A3S7GUB4 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 43474 44217 . - . GCA_005502385.1_01290_gene GCA_005502385.1_01290 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDYLQQFLTTTVILNIYLVIIIAIFYIIIHQNRHCSFSQYLDIYLNYIPVLTHEMGHILFNKVSGGHAKDLVIVVRPSERKETLQQGYAITQSKSVTGQCITTLGGYVMPPIMLMIGFWTIHFNYPSLFLILYSLIFVYYLNLTSRKLSPIIVLIILISLLYFLLQDNNQFMIFYIVVFLCHLILGVLLGEVLQSSWTIILLTFRRVKTHWDGNTLAELTHLPTLFYSLFWIMINGFSLYLIYKFMV . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 43474 44217 . - . GCA_005502385.1_01290_mRNA GCA_005502385.1_01290 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDYLQQFLTTTVILNIYLVIIIAIFYIIIHQNRHCSFSQYLDIYLNYIPVLTHEMGHILFNKVSGGHAKDLVIVVRPSERKETLQQGYAITQSKSVTGQCITTLGGYVMPPIMLMIGFWTIHFNYPSLFLILYSLIFVYYLNLTSRKLSPIIVLIILISLLYFLLQDNNQFMIFYIVVFLCHLILGVLLGEVLQSSWTIILLTFRRVKTHWDGNTLAELTHLPTLFYSLFWIMINGFSLYLIYKFMV . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 43474 44217 . - 0 GCA_005502385.1_01290 GCA_005502385.1_01290_gene,GCA_005502385.1_01290_mRNA GCA_005502385.1_01290 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDYLQQFLTTTVILNIYLVIIIAIFYIIIHQNRHCSFSQYLDIYLNYIPVLTHEMGHILFNKVSGGHAKDLVIVVRPSERKETLQQGYAITQSKSVTGQCITTLGGYVMPPIMLMIGFWTIHFNYPSLFLILYSLIFVYYLNLTSRKLSPIIVLIILISLLYFLLQDNNQFMIFYIVVFLCHLILGVLLGEVLQSSWTIILLTFRRVKTHWDGNTLAELTHLPTLFYSLFWIMINGFSLYLIYKFMV persistent 247 M50 family peptidase WP_137689584.1 UPI0010F57EF5 UniRef100_UPI0010F57EF5,UniRef50_Q49VI1,UniRef90_A0A974KX79 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 44396 45154 . + . GCA_005502385.1_01291_gene GCA_005502385.1_01291 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MYSSKKKKNDKVDILGVQFDNVTMLDMVENIKHFFENNTNDNLFIVTANPEIVVYASEHVTYRKLINSASYIIADGTGVVKASNRLKQPLKRRVPGIELMEECIKVAHEQSQKVYLLGSKNEIVAQAQHKLQQKYPNVTFEYHHGYIDLSDETVVKRIQRFNPDYLFVGMGVPKQEEWIQKNESNFKHTVMMGVGGSLEVFSGTKKRAPRLFRNLNMEWVYRLLIDWKRIGRIKSIPKFMFKVWKLQNKKKK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 44396 45154 . + . GCA_005502385.1_01291_mRNA GCA_005502385.1_01291 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MYSSKKKKNDKVDILGVQFDNVTMLDMVENIKHFFENNTNDNLFIVTANPEIVVYASEHVTYRKLINSASYIIADGTGVVKASNRLKQPLKRRVPGIELMEECIKVAHEQSQKVYLLGSKNEIVAQAQHKLQQKYPNVTFEYHHGYIDLSDETVVKRIQRFNPDYLFVGMGVPKQEEWIQKNESNFKHTVMMGVGGSLEVFSGTKKRAPRLFRNLNMEWVYRLLIDWKRIGRIKSIPKFMFKVWKLQNKKKK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 44396 45154 . + 0 GCA_005502385.1_01291 GCA_005502385.1_01291_gene,GCA_005502385.1_01291_mRNA GCA_005502385.1_01291 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MYSSKKKKNDKVDILGVQFDNVTMLDMVENIKHFFENNTNDNLFIVTANPEIVVYASEHVTYRKLINSASYIIADGTGVVKASNRLKQPLKRRVPGIELMEECIKVAHEQSQKVYLLGSKNEIVAQAQHKLQQKYPNVTFEYHHGYIDLSDETVVKRIQRFNPDYLFVGMGVPKQEEWIQKNESNFKHTVMMGVGGSLEVFSGTKKRAPRLFRNLNMEWVYRLLIDWKRIGRIKSIPKFMFKVWKLQNKKKK persistent 252 tarA N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TarA 2.4.1.187 GO:0019350,GO:0047244 WP_002455672.1 UPI0001EF5487 UniRef100_UPI0001EF5487,UniRef50_A0A380G8V5,UniRef90_A0A3S7GXS7 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 45202 45996 . - . GCA_005502385.1_01292_gene GCA_005502385.1_01292 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSVSVNINHVTKEYRIYRNNKERIKDALIPKNKNKTFFALNDVSITAYEGDVIGLVGINGSGKSTLSNMIGGSLSPSSGNIDRHGEVSVIAINAGLNGKLTGIENIEFKMLCMGFKKKEIKRLMPQVIEFSELGEFIYQPVKNYSSGMRAKLGFSINVTINPDILVIDEALSVGDQTFTQKCLDKIYEFKEANKTIFFVSHNIRQVREFCTKIAWIEGGKLKEFGELDTVLPKYEQFLKDFKKKSKKDQKAFRQQLDEKRFVVK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 45202 45996 . - . GCA_005502385.1_01292_mRNA GCA_005502385.1_01292 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSVSVNINHVTKEYRIYRNNKERIKDALIPKNKNKTFFALNDVSITAYEGDVIGLVGINGSGKSTLSNMIGGSLSPSSGNIDRHGEVSVIAINAGLNGKLTGIENIEFKMLCMGFKKKEIKRLMPQVIEFSELGEFIYQPVKNYSSGMRAKLGFSINVTINPDILVIDEALSVGDQTFTQKCLDKIYEFKEANKTIFFVSHNIRQVREFCTKIAWIEGGKLKEFGELDTVLPKYEQFLKDFKKKSKKDQKAFRQQLDEKRFVVK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 45202 45996 . - 0 GCA_005502385.1_01292 GCA_005502385.1_01292_gene,GCA_005502385.1_01292_mRNA GCA_005502385.1_01292 Teichoic acids export ATP-binding protein TagH GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSVSVNINHVTKEYRIYRNNKERIKDALIPKNKNKTFFALNDVSITAYEGDVIGLVGINGSGKSTLSNMIGGSLSPSSGNIDRHGEVSVIAINAGLNGKLTGIENIEFKMLCMGFKKKEIKRLMPQVIEFSELGEFIYQPVKNYSSGMRAKLGFSINVTINPDILVIDEALSVGDQTFTQKCLDKIYEFKEANKTIFFVSHNIRQVREFCTKIAWIEGGKLKEFGELDTVLPKYEQFLKDFKKKSKKDQKAFRQQLDEKRFVVK persistent 264 tagH teichoic acids export ABC transporter ATP-binding subunit TagH 7.5.2.4 GO:0005524,GO:0005886,GO:0015438,GO:0016020,GO:0016887,GO:0140359 COG1134,G WP_002449138.1 UPI00019FC1CF UniRef100_A0A1L8Y662,UniRef50_Q4L459,UniRef90_Q4L459 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 46278 47123 . + . GCA_005502385.1_01293_gene GCA_005502385.1_01293 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNLQLKVWFISMSAVGTVFKEHIKNFYLVQRLAQFQIKITNTNNYLGMAWELLNPALQIMVYWFVFGMGIRSNQPIHGIPFILWLLVGISMWFFVNQGILEGTKSVSMKFNQVAKMNFPLSIIPTYIVTSKFYGHIGLLALIIAICMGNGIMPSIHIVQLLIYVPLTFFFVASVALFTSTLGIIVRDTQMIMQALLRILFYMSPILWIPKDTGISSVINDIMKFNPVYFLAESYRAAILFHQWYFIEHWRLLLYNMIIILVFFVLGSILHRRYRDHFADFL . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 46278 47123 . + . GCA_005502385.1_01293_mRNA GCA_005502385.1_01293 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNLQLKVWFISMSAVGTVFKEHIKNFYLVQRLAQFQIKITNTNNYLGMAWELLNPALQIMVYWFVFGMGIRSNQPIHGIPFILWLLVGISMWFFVNQGILEGTKSVSMKFNQVAKMNFPLSIIPTYIVTSKFYGHIGLLALIIAICMGNGIMPSIHIVQLLIYVPLTFFFVASVALFTSTLGIIVRDTQMIMQALLRILFYMSPILWIPKDTGISSVINDIMKFNPVYFLAESYRAAILFHQWYFIEHWRLLLYNMIIILVFFVLGSILHRRYRDHFADFL . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 46278 47123 . + 0 GCA_005502385.1_01293 GCA_005502385.1_01293_gene,GCA_005502385.1_01293_mRNA GCA_005502385.1_01293 Teichoic acid translocation permease protein TagG GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNLQLKVWFISMSAVGTVFKEHIKNFYLVQRLAQFQIKITNTNNYLGMAWELLNPALQIMVYWFVFGMGIRSNQPIHGIPFILWLLVGISMWFFVNQGILEGTKSVSMKFNQVAKMNFPLSIIPTYIVTSKFYGHIGLLALIIAICMGNGIMPSIHIVQLLIYVPLTFFFVASVALFTSTLGIIVRDTQMIMQALLRILFYMSPILWIPKDTGISSVINDIMKFNPVYFLAESYRAAILFHQWYFIEHWRLLLYNMIIILVFFVLGSILHRRYRDHFADFL persistent 281 ABC transporter permease UniRef50_B9DKC2,UniRef90_A0A974KXI9 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 47346 48440 . + . GCA_005502385.1_01294_gene GCA_005502385.1_01294 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MMTRVVIKNIYMTLITIVNQIFRFKRLKSNHIAILMTFPEDVMPIIEQLNQKGYELTVIAKEKEWAKLKQFKNVSFVPAGNNHIVRHIKTISTAKVIVIDTYYLMLGGYHKKKGQTIIQTWHASGALKNFGLTDHQVDLNNKKMVQQYKSVYKATDYYLVGGEEMSKCFESAFDAKRTQMLKLGLPRLTKYFKLDLKTEQKKLKKYYNIPNKLALYVPTYRENQMDNRQIDKVYFEKQLPNYTLINQLHPSIPNSEHIAPTSELIMMADIIISDYSSLPIEASLLNKPTLFYVFDEEEYEEVRGLNQFYRDIPTFYKVKHIDELVTKIKYNEKEIKPLFKHWHKYNSEKSLENVLKFIEKLVKE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 47346 48440 . + . GCA_005502385.1_01294_mRNA GCA_005502385.1_01294 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MMTRVVIKNIYMTLITIVNQIFRFKRLKSNHIAILMTFPEDVMPIIEQLNQKGYELTVIAKEKEWAKLKQFKNVSFVPAGNNHIVRHIKTISTAKVIVIDTYYLMLGGYHKKKGQTIIQTWHASGALKNFGLTDHQVDLNNKKMVQQYKSVYKATDYYLVGGEEMSKCFESAFDAKRTQMLKLGLPRLTKYFKLDLKTEQKKLKKYYNIPNKLALYVPTYRENQMDNRQIDKVYFEKQLPNYTLINQLHPSIPNSEHIAPTSELIMMADIIISDYSSLPIEASLLNKPTLFYVFDEEEYEEVRGLNQFYRDIPTFYKVKHIDELVTKIKYNEKEIKPLFKHWHKYNSEKSLENVLKFIEKLVKE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 47346 48440 . + 0 GCA_005502385.1_01294 GCA_005502385.1_01294_gene,GCA_005502385.1_01294_mRNA GCA_005502385.1_01294 Teichoic acid glycerol-phosphate primase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MMTRVVIKNIYMTLITIVNQIFRFKRLKSNHIAILMTFPEDVMPIIEQLNQKGYELTVIAKEKEWAKLKQFKNVSFVPAGNNHIVRHIKTISTAKVIVIDTYYLMLGGYHKKKGQTIIQTWHASGALKNFGLTDHQVDLNNKKMVQQYKSVYKATDYYLVGGEEMSKCFESAFDAKRTQMLKLGLPRLTKYFKLDLKTEQKKLKKYYNIPNKLALYVPTYRENQMDNRQIDKVYFEKQLPNYTLINQLHPSIPNSEHIAPTSELIMMADIIISDYSSLPIEASLLNKPTLFYVFDEEEYEEVRGLNQFYRDIPTFYKVKHIDELVTKIKYNEKEIKPLFKHWHKYNSEKSLENVLKFIEKLVKE persistent 364 tarB teichoic acid glycerol-phosphate primase TarB 2.7.8.44 GO:0019350,GO:0047355 WP_049382099.1 UPI00066AA818 UniRef100_UPI00066AA818,UniRef50_A0A653YXU2,UniRef90_A0A8X8GKM3 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 48437 49501 . + . GCA_005502385.1_01295_gene GCA_005502385.1_01295 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKLAVIIPVYNAENTIRKAVKSIDTTHDVEIICINDGSTDRTKQVLTELQKEVKHLIVYHQDNQGAAKSRNMGLSAMSDDIDAFMFLDADDQFLPGKMDQMIQYYEKNEHLDIVIGQIGRGLNGDWKVIPTHEDIHREAIVSLAEAPEILQSIGPGGKLFKAKFNTLRFDEDVVFCEEHTFVTRAYLMARDIQLVPFIVYGYNEREGSITDQRADTFISYLEDARKVRCEVMDMLLLVNEKAYYSYRMDDLIVSYLIQAYLIKYSKVTLQIIDKITQYIRDMQHTNYSGEALFRIVQAVEQSATHWTRETYELWRHTLIDVGIGRPGFLRFQAQVMPKKLAFSGKQSLKRIMNK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 48437 49501 . + . GCA_005502385.1_01295_mRNA GCA_005502385.1_01295 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKLAVIIPVYNAENTIRKAVKSIDTTHDVEIICINDGSTDRTKQVLTELQKEVKHLIVYHQDNQGAAKSRNMGLSAMSDDIDAFMFLDADDQFLPGKMDQMIQYYEKNEHLDIVIGQIGRGLNGDWKVIPTHEDIHREAIVSLAEAPEILQSIGPGGKLFKAKFNTLRFDEDVVFCEEHTFVTRAYLMARDIQLVPFIVYGYNEREGSITDQRADTFISYLEDARKVRCEVMDMLLLVNEKAYYSYRMDDLIVSYLIQAYLIKYSKVTLQIIDKITQYIRDMQHTNYSGEALFRIVQAVEQSATHWTRETYELWRHTLIDVGIGRPGFLRFQAQVMPKKLAFSGKQSLKRIMNK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 48437 49501 . + 0 GCA_005502385.1_01295 GCA_005502385.1_01295_gene,GCA_005502385.1_01295_mRNA GCA_005502385.1_01295 Putative glycosyltransferase TagX GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKLAVIIPVYNAENTIRKAVKSIDTTHDVEIICINDGSTDRTKQVLTELQKEVKHLIVYHQDNQGAAKSRNMGLSAMSDDIDAFMFLDADDQFLPGKMDQMIQYYEKNEHLDIVIGQIGRGLNGDWKVIPTHEDIHREAIVSLAEAPEILQSIGPGGKLFKAKFNTLRFDEDVVFCEEHTFVTRAYLMARDIQLVPFIVYGYNEREGSITDQRADTFISYLEDARKVRCEVMDMLLLVNEKAYYSYRMDDLIVSYLIQAYLIKYSKVTLQIIDKITQYIRDMQHTNYSGEALFRIVQAVEQSATHWTRETYELWRHTLIDVGIGRPGFLRFQAQVMPKKLAFSGKQSLKRIMNK persistent 354 Glycosyltransferase WP_017176013.1 UPI0002D68AC0 UniRef100_A0A8X8GMT8,UniRef50_Q4L462,UniRef90_A0A8X8GMT8 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 49607 50005 . + . GCA_005502385.1_01296_gene GCA_005502385.1_01296 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIKNKKSYYDFEQRKMMLESIRYVDLVIPEDGWGQKETDVDRYDVDVFVMGHDWEGQFDFLKDKCEVVYLKRTEGISTTKIKQELYGKDAK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 49607 50005 . + . GCA_005502385.1_01296_mRNA GCA_005502385.1_01296 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIKNKKSYYDFEQRKMMLESIRYVDLVIPEDGWGQKETDVDRYDVDVFVMGHDWEGQFDFLKDKCEVVYLKRTEGISTTKIKQELYGKDAK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 49607 50005 . + 0 GCA_005502385.1_01296 GCA_005502385.1_01296_gene,GCA_005502385.1_01296_mRNA GCA_005502385.1_01296 Glycerol-3-phosphate cytidylyltransferase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIKNKKSYYDFEQRKMMLESIRYVDLVIPEDGWGQKETDVDRYDVDVFVMGHDWEGQFDFLKDKCEVVYLKRTEGISTTKIKQELYGKDAK persistent 132 tagD glycerol-3-phosphate cytidylyltransferase 2.7.7.39 GO:0005737,GO:0019350,GO:0046872,GO:0047348,GO:0071555 COG0615,M WP_017176012.1 UPI00031CE04A UniRef100_A0A1L8Y664,UniRef50_Q2G2X2,UniRef90_Q2G2X2 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 50312 52039 . + . GCA_005502385.1_01297_gene GCA_005502385.1_01297 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKQHNPLFFLFKRLSWPYGLIITAVIISSLGSLSGLLIPLFTGRLVDKFSTNNINWNIVVLFASIFIINALLSGLGIYLLSKIGEKMIYGIRSLLWEHMIKLKMPFFDKNESGQLMSRLTDDTKVINDFISQKLPQLLPAIITLIGSIIMLFIMDWQMTLLTFIAIPIFMGIMIPLGRRMQKISKHTQAEIANFSGLLGRVLTEMRLVKISNTEQKELNNAHYNLNEIYKLGLRQAKIVAIIQPISSVIMLLMIAIILGFGAIRIATGAITAGALIAMIFYVMQLSMPLMNLSTLVTDYKKAVGASQRIYEIMQEPVEPMEQLKPIANINIENGALEFNNVEFKYDVKTILDHVSFRIPQGDISAFVGPSGSGKSTIFNLIERMYDIDNGDITYGNESIYDIPITNWRSKIGYVMQSNSMMTGTIRDNILYGINRNVSDEELIKYAKLANCHDFIMQFDEGYDTLVGERGLKLSGGQRQRIDIARSFVKNPDILLLDEATANLDSESEQKIQEALEVLMKGRTTIVIAHRLSTIKKAGQIIFIDQGRVTGEGTHDELMKYHEKYHQFVTTQNLNK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 50312 52039 . + . GCA_005502385.1_01297_mRNA GCA_005502385.1_01297 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKQHNPLFFLFKRLSWPYGLIITAVIISSLGSLSGLLIPLFTGRLVDKFSTNNINWNIVVLFASIFIINALLSGLGIYLLSKIGEKMIYGIRSLLWEHMIKLKMPFFDKNESGQLMSRLTDDTKVINDFISQKLPQLLPAIITLIGSIIMLFIMDWQMTLLTFIAIPIFMGIMIPLGRRMQKISKHTQAEIANFSGLLGRVLTEMRLVKISNTEQKELNNAHYNLNEIYKLGLRQAKIVAIIQPISSVIMLLMIAIILGFGAIRIATGAITAGALIAMIFYVMQLSMPLMNLSTLVTDYKKAVGASQRIYEIMQEPVEPMEQLKPIANINIENGALEFNNVEFKYDVKTILDHVSFRIPQGDISAFVGPSGSGKSTIFNLIERMYDIDNGDITYGNESIYDIPITNWRSKIGYVMQSNSMMTGTIRDNILYGINRNVSDEELIKYAKLANCHDFIMQFDEGYDTLVGERGLKLSGGQRQRIDIARSFVKNPDILLLDEATANLDSESEQKIQEALEVLMKGRTTIVIAHRLSTIKKAGQIIFIDQGRVTGEGTHDELMKYHEKYHQFVTTQNLNK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 50312 52039 . + 0 GCA_005502385.1_01297 GCA_005502385.1_01297_gene,GCA_005502385.1_01297_mRNA GCA_005502385.1_01297 Multidrug resistance ABC transporter ATP-binding/permease protein BmrA GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKQHNPLFFLFKRLSWPYGLIITAVIISSLGSLSGLLIPLFTGRLVDKFSTNNINWNIVVLFASIFIINALLSGLGIYLLSKIGEKMIYGIRSLLWEHMIKLKMPFFDKNESGQLMSRLTDDTKVINDFISQKLPQLLPAIITLIGSIIMLFIMDWQMTLLTFIAIPIFMGIMIPLGRRMQKISKHTQAEIANFSGLLGRVLTEMRLVKISNTEQKELNNAHYNLNEIYKLGLRQAKIVAIIQPISSVIMLLMIAIILGFGAIRIATGAITAGALIAMIFYVMQLSMPLMNLSTLVTDYKKAVGASQRIYEIMQEPVEPMEQLKPIANINIENGALEFNNVEFKYDVKTILDHVSFRIPQGDISAFVGPSGSGKSTIFNLIERMYDIDNGDITYGNESIYDIPITNWRSKIGYVMQSNSMMTGTIRDNILYGINRNVSDEELIKYAKLANCHDFIMQFDEGYDTLVGERGLKLSGGQRQRIDIARSFVKNPDILLLDEATANLDSESEQKIQEALEVLMKGRTTIVIAHRLSTIKKAGQIIFIDQGRVTGEGTHDELMKYHEKYHQFVTTQNLNK persistent 575 ABC transporter ATP-binding protein WP_019834902.1 UPI000360E96D UniRef100_UPI000360E96D,UniRef50_Q2G2E5,UniRef90_A0A8I0WAM7 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 52194 54365 . + . GCA_005502385.1_01298_gene GCA_005502385.1_01298 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNKLSIIITYFNSEEYIEDCINSLKTQRNQDFEIIIVDDGSTDHSTQILNKTLASYDKDVTFIQLETNTGHAHARNIALDLAKGQYVMFLDADDQLASYAIEYYLNHINGLDTLIAPVHKFTMQRPQYVDKDKIRLQYRSHHSYPNSILRKETACNILFRNAIIKAHDIKFNEDLSIFIDNSFVLEYLKYAEHFVRIVNFPFYYRGEVYDPFNGNTLSDQDFIDKFEDYTNSFFDAIQRTTNKEVKKFLVQRMKNEIKKGFDPSLRDIKARYIALEHTLVKVVKALKWNIIKDGKLLYNLEIMFLSMDDIENARYVNELRKKTRLFKSILTNNKMKERAKYQLTDNENMVDPHTIIFESFGGKNYSDSPKYIYEYMQQHYPQYKYIWVFSKPNNNIIPGNATKVKKGSKEYYEAYAKAKYWISNARLPLYLNKKENQMYIQTWHGTPLKRLANDMKVVRMPGTTTANYKKNFYTEASRWNYLVSPNRYSTDIFKSAFWMNEERIWEIGYPRNDVLVTRQNDTEYIEQIKKDLNLPKDKKVIMYAPTWRDDEFVKKGQYLFDLKINLANLKEQIGDDYVILLRMHYLIANALDLTGYDDFAIDVSNYNDISELYLISDALITDYSSVMFDYGILKRPQFFFAYDIEKYDKGLRGFYMNYMEDLPGEIITDEFKLAEELKHLDTHKEKYKDKIEAFYNDFCSIEKGQSSKFIADYIHNDIHENES . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 52194 54365 . + . GCA_005502385.1_01298_mRNA GCA_005502385.1_01298 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNKLSIIITYFNSEEYIEDCINSLKTQRNQDFEIIIVDDGSTDHSTQILNKTLASYDKDVTFIQLETNTGHAHARNIALDLAKGQYVMFLDADDQLASYAIEYYLNHINGLDTLIAPVHKFTMQRPQYVDKDKIRLQYRSHHSYPNSILRKETACNILFRNAIIKAHDIKFNEDLSIFIDNSFVLEYLKYAEHFVRIVNFPFYYRGEVYDPFNGNTLSDQDFIDKFEDYTNSFFDAIQRTTNKEVKKFLVQRMKNEIKKGFDPSLRDIKARYIALEHTLVKVVKALKWNIIKDGKLLYNLEIMFLSMDDIENARYVNELRKKTRLFKSILTNNKMKERAKYQLTDNENMVDPHTIIFESFGGKNYSDSPKYIYEYMQQHYPQYKYIWVFSKPNNNIIPGNATKVKKGSKEYYEAYAKAKYWISNARLPLYLNKKENQMYIQTWHGTPLKRLANDMKVVRMPGTTTANYKKNFYTEASRWNYLVSPNRYSTDIFKSAFWMNEERIWEIGYPRNDVLVTRQNDTEYIEQIKKDLNLPKDKKVIMYAPTWRDDEFVKKGQYLFDLKINLANLKEQIGDDYVILLRMHYLIANALDLTGYDDFAIDVSNYNDISELYLISDALITDYSSVMFDYGILKRPQFFFAYDIEKYDKGLRGFYMNYMEDLPGEIITDEFKLAEELKHLDTHKEKYKDKIEAFYNDFCSIEKGQSSKFIADYIHNDIHENES . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 52194 54365 . + 0 GCA_005502385.1_01298 GCA_005502385.1_01298_gene,GCA_005502385.1_01298_mRNA GCA_005502385.1_01298 Teichoic acid poly(glycerol phosphate) polymerase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNKLSIIITYFNSEEYIEDCINSLKTQRNQDFEIIIVDDGSTDHSTQILNKTLASYDKDVTFIQLETNTGHAHARNIALDLAKGQYVMFLDADDQLASYAIEYYLNHINGLDTLIAPVHKFTMQRPQYVDKDKIRLQYRSHHSYPNSILRKETACNILFRNAIIKAHDIKFNEDLSIFIDNSFVLEYLKYAEHFVRIVNFPFYYRGEVYDPFNGNTLSDQDFIDKFEDYTNSFFDAIQRTTNKEVKKFLVQRMKNEIKKGFDPSLRDIKARYIALEHTLVKVVKALKWNIIKDGKLLYNLEIMFLSMDDIENARYVNELRKKTRLFKSILTNNKMKERAKYQLTDNENMVDPHTIIFESFGGKNYSDSPKYIYEYMQQHYPQYKYIWVFSKPNNNIIPGNATKVKKGSKEYYEAYAKAKYWISNARLPLYLNKKENQMYIQTWHGTPLKRLANDMKVVRMPGTTTANYKKNFYTEASRWNYLVSPNRYSTDIFKSAFWMNEERIWEIGYPRNDVLVTRQNDTEYIEQIKKDLNLPKDKKVIMYAPTWRDDEFVKKGQYLFDLKINLANLKEQIGDDYVILLRMHYLIANALDLTGYDDFAIDVSNYNDISELYLISDALITDYSSVMFDYGILKRPQFFFAYDIEKYDKGLRGFYMNYMEDLPGEIITDEFKLAEELKHLDTHKEKYKDKIEAFYNDFCSIEKGQSSKFIADYIHNDIHENES persistent 723 CDP-glycerol:glycerophosphate glycerophosphotransferase WP_080978908.1 UPI0009BABB80 UniRef100_UPI0009BABB80,UniRef50_Q5HLM5,UniRef90_A0A974QND4 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 54648 55880 . + . GCA_005502385.1_01299_gene GCA_005502385.1_01299 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MFLLINIIGLLVFLGIAVLFSRDRKHIQWKSILILVLLNVFLAWFFVYFQIGRSIVEGLAAAIAWVIQSAHTGTGFAFSSFTSGKQMDMAVSALFPILLVVPLFDILMYFNILPKIIGGIGFVLAKITRQPKFESFFGIEMMFLGNTEALAVSNEQLKRMNEMRVLTVAMMSMSSISGAIVGAYVQMIPGELVLTAIPLNIINAIIVASILNPVTVEEKEDIIYSINNDEKIERQPFFSFLGDSVLNAGKLVLIIIAFVISFVALADFLDRFINLITGLVGSWMGMKGSFGLNQILGVFMYPFALLLGLPWGEAWIVAQQMSKKIVTNEFVVMGEITKVIDTYSAHRRAVISTFLVSFANFSTIGMIVGTLKGIVDKKTSDFVSKYVPMMLLSGILVSLLTAAFVGLFAW . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 54648 55880 . + . GCA_005502385.1_01299_mRNA GCA_005502385.1_01299 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MFLLINIIGLLVFLGIAVLFSRDRKHIQWKSILILVLLNVFLAWFFVYFQIGRSIVEGLAAAIAWVIQSAHTGTGFAFSSFTSGKQMDMAVSALFPILLVVPLFDILMYFNILPKIIGGIGFVLAKITRQPKFESFFGIEMMFLGNTEALAVSNEQLKRMNEMRVLTVAMMSMSSISGAIVGAYVQMIPGELVLTAIPLNIINAIIVASILNPVTVEEKEDIIYSINNDEKIERQPFFSFLGDSVLNAGKLVLIIIAFVISFVALADFLDRFINLITGLVGSWMGMKGSFGLNQILGVFMYPFALLLGLPWGEAWIVAQQMSKKIVTNEFVVMGEITKVIDTYSAHRRAVISTFLVSFANFSTIGMIVGTLKGIVDKKTSDFVSKYVPMMLLSGILVSLLTAAFVGLFAW . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 54648 55880 . + 0 GCA_005502385.1_01299 GCA_005502385.1_01299_gene,GCA_005502385.1_01299_mRNA GCA_005502385.1_01299 Purine nucleoside transport protein NupG GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MFLLINIIGLLVFLGIAVLFSRDRKHIQWKSILILVLLNVFLAWFFVYFQIGRSIVEGLAAAIAWVIQSAHTGTGFAFSSFTSGKQMDMAVSALFPILLVVPLFDILMYFNILPKIIGGIGFVLAKITRQPKFESFFGIEMMFLGNTEALAVSNEQLKRMNEMRVLTVAMMSMSSISGAIVGAYVQMIPGELVLTAIPLNIINAIIVASILNPVTVEEKEDIIYSINNDEKIERQPFFSFLGDSVLNAGKLVLIIIAFVISFVALADFLDRFINLITGLVGSWMGMKGSFGLNQILGVFMYPFALLLGLPWGEAWIVAQQMSKKIVTNEFVVMGEITKVIDTYSAHRRAVISTFLVSFANFSTIGMIVGTLKGIVDKKTSDFVSKYVPMMLLSGILVSLLTAAFVGLFAW persistent 410 nupC NupC/NupG family nucleoside CNT transporter COG1972,F WP_017176009.1 UPI00031F3295 UniRef100_A0A4Q9WSC7,UniRef50_Q2G2E4,UniRef90_A0A2A1K500 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 55987 56176 . - . GCA_005502385.1_01300_gene GCA_005502385.1_01300 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 55987 56176 . - . GCA_005502385.1_01300_mRNA GCA_005502385.1_01300 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 . . . . . . . GCA_005502385.1|SCOV01000003.1 Infernal:001001 misc_RNA 55987 56176 218.0 - . GCA_005502385.1_01300 GCA_005502385.1_01300_gene,GCA_005502385.1_01300_mRNA GCA_005502385.1_01300 RsaD GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 56395 57228 . + . GCA_005502385.1_01301_gene GCA_005502385.1_01301 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNKNIKNILLVILGSFIFSAGVNAFIISGNLGEGGVTGIAIVLYYAFHISPALTNFVANAILIVIGYKFLSKKSTILTIIATVLISVFLSLTESWHVETGNVIINAVFGGTSVGLGIGIIVLAGGTTAGTTILARIANKYLDVSTAYALLFFDLIVVVISLTVLPLSKALVTVISLYIGTKVMDYVIEGLNTKKAMTIISSKPEEVAKAIDEQVGRGLTILNGHGYYSREEKDVLYVVVAKTQVTRAKRIIKKIDKNAFLVIHDVRDVYGNGFLIDE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 56395 57228 . + . GCA_005502385.1_01301_mRNA GCA_005502385.1_01301 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNKNIKNILLVILGSFIFSAGVNAFIISGNLGEGGVTGIAIVLYYAFHISPALTNFVANAILIVIGYKFLSKKSTILTIIATVLISVFLSLTESWHVETGNVIINAVFGGTSVGLGIGIIVLAGGTTAGTTILARIANKYLDVSTAYALLFFDLIVVVISLTVLPLSKALVTVISLYIGTKVMDYVIEGLNTKKAMTIISSKPEEVAKAIDEQVGRGLTILNGHGYYSREEKDVLYVVVAKTQVTRAKRIIKKIDKNAFLVIHDVRDVYGNGFLIDE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 56395 57228 . + 0 GCA_005502385.1_01301 GCA_005502385.1_01301_gene,GCA_005502385.1_01301_mRNA GCA_005502385.1_01301 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNKNIKNILLVILGSFIFSAGVNAFIISGNLGEGGVTGIAIVLYYAFHISPALTNFVANAILIVIGYKFLSKKSTILTIIATVLISVFLSLTESWHVETGNVIINAVFGGTSVGLGIGIIVLAGGTTAGTTILARIANKYLDVSTAYALLFFDLIVVVISLTVLPLSKALVTVISLYIGTKVMDYVIEGLNTKKAMTIISSKPEEVAKAIDEQVGRGLTILNGHGYYSREEKDVLYVVVAKTQVTRAKRIIKKIDKNAFLVIHDVRDVYGNGFLIDE persistent 277 DUF2179 domain-containing protein WP_019834904.1 UPI00037684E4 UniRef100_UPI00119ED561,UniRef50_B9E9G0,UniRef90_A0A974QN63 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 57414 58205 . + . GCA_005502385.1_01302_gene GCA_005502385.1_01302 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNRLNASQVDIGYRNTTIIKELDVQIRDGKVTSIIGPNGCGKSTLLKALSRLIEVKKGEVLLDNQNIQHQSTKEVAKKIAILPQTPTVTDSITVEELVSYGRFPHQKGFGRLSKKDKDEIEWSLNVTGITEFRHQSINDLSGGQRQRVWIAMALAQKTDIIFLDEPTTYLDISHQLEILELVQHLNKELGCTIVMVLHDINQAIRFSDYLLIMKEGHIIDNGPTDQVLSKEILESVFNIDAVLGKDPRTGKPLLVTYNLLEKR . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 57414 58205 . + . GCA_005502385.1_01302_mRNA GCA_005502385.1_01302 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNRLNASQVDIGYRNTTIIKELDVQIRDGKVTSIIGPNGCGKSTLLKALSRLIEVKKGEVLLDNQNIQHQSTKEVAKKIAILPQTPTVTDSITVEELVSYGRFPHQKGFGRLSKKDKDEIEWSLNVTGITEFRHQSINDLSGGQRQRVWIAMALAQKTDIIFLDEPTTYLDISHQLEILELVQHLNKELGCTIVMVLHDINQAIRFSDYLLIMKEGHIIDNGPTDQVLSKEILESVFNIDAVLGKDPRTGKPLLVTYNLLEKR . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 57414 58205 . + 0 GCA_005502385.1_01302 GCA_005502385.1_01302_gene,GCA_005502385.1_01302_mRNA GCA_005502385.1_01302 Ferric enterobactin transport ATP-binding protein FepC GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNRLNASQVDIGYRNTTIIKELDVQIRDGKVTSIIGPNGCGKSTLLKALSRLIEVKKGEVLLDNQNIQHQSTKEVAKKIAILPQTPTVTDSITVEELVSYGRFPHQKGFGRLSKKDKDEIEWSLNVTGITEFRHQSINDLSGGQRQRVWIAMALAQKTDIIFLDEPTTYLDISHQLEILELVQHLNKELGCTIVMVLHDINQAIRFSDYLLIMKEGHIIDNGPTDQVLSKEILESVFNIDAVLGKDPRTGKPLLVTYNLLEKR persistent 263 ABC transporter ATP-binding protein WP_017176007.1 UPI00031981AE UniRef100_A0A1L8Y666,UniRef50_R2PWZ5,UniRef90_A0A1L8Y666 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 58424 58807 . + . GCA_005502385.1_01303_gene GCA_005502385.1_01303 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MMTTIVIISHSEEIAKGTKNLLNKMTNDINVIAYGGVNGEIGTSYDDIEQLINQLDDDALCFYDLGSSEMNIDLAIDMYKGKYHIYKVNAPIVEGSFTAAMSLSVGKTANEAIQEVNRSSFKSTAFK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 58424 58807 . + . GCA_005502385.1_01303_mRNA GCA_005502385.1_01303 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MMTTIVIISHSEEIAKGTKNLLNKMTNDINVIAYGGVNGEIGTSYDDIEQLINQLDDDALCFYDLGSSEMNIDLAIDMYKGKYHIYKVNAPIVEGSFTAAMSLSVGKTANEAIQEVNRSSFKSTAFK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 58424 58807 . + 0 GCA_005502385.1_01303 GCA_005502385.1_01303_gene,GCA_005502385.1_01303_mRNA GCA_005502385.1_01303 PTS-dependent dihydroxyacetone kinase%2C phosphotransferase subunit DhaM GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MMTTIVIISHSEEIAKGTKNLLNKMTNDINVIAYGGVNGEIGTSYDDIEQLINQLDDDALCFYDLGSSEMNIDLAIDMYKGKYHIYKVNAPIVEGSFTAAMSLSVGKTANEAIQEVNRSSFKSTAFK persistent 127 phosphoenolpyruvate--glycerone phosphotransferase UniRef50_A0A2T4MIK7,UniRef90_A0A8X8KHI7 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 58923 59426 . + . GCA_005502385.1_01304_gene GCA_005502385.1_01304 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLQEDIKFYVLNGKFEEIKNIMSNIDFMEFEEVYISCAHEQENIMFYTCILDMMKANETAELHDLAFLLLVYPLSEVEGALEAAYYHADASIQLTNGKEIKSLLQMLLLYAIPDPIISDSEAFKVAKQILKLDPNNHVARNVLKDSAKRMDNVIVNFDELKKFGSSK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 58923 59426 . + . GCA_005502385.1_01304_mRNA GCA_005502385.1_01304 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLQEDIKFYVLNGKFEEIKNIMSNIDFMEFEEVYISCAHEQENIMFYTCILDMMKANETAELHDLAFLLLVYPLSEVEGALEAAYYHADASIQLTNGKEIKSLLQMLLLYAIPDPIISDSEAFKVAKQILKLDPNNHVARNVLKDSAKRMDNVIVNFDELKKFGSSK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 58923 59426 . + 0 GCA_005502385.1_01304 GCA_005502385.1_01304_gene,GCA_005502385.1_01304_mRNA GCA_005502385.1_01304 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLQEDIKFYVLNGKFEEIKNIMSNIDFMEFEEVYISCAHEQENIMFYTCILDMMKANETAELHDLAFLLLVYPLSEVEGALEAAYYHADASIQLTNGKEIKSLLQMLLLYAIPDPIISDSEAFKVAKQILKLDPNNHVARNVLKDSAKRMDNVIVNFDELKKFGSSK persistent 167 Immunity protein 30 domain-containing protein WP_017176005.1 UPI0002ED8B1B UniRef100_A0A4Q9WS30,UniRef50_S2YNQ8,UniRef90_A0A6N0I3H5 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 59695 60762 . + . GCA_005502385.1_01305_gene GCA_005502385.1_01305 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MGLNKESIKIGFAYVGIVVGAGFSTGQEVMQFFTPYGLWSYIGVLISGLILGFIGRQVAKIGTAFEATNHESTLQYLFGEKFSKIFDYILVFFLFGIAVTMIAGSGATFEESFGIPTWLGALIMTVVIYLTLLLDFNKIVRALGFVTPFLIVMVVLIAIYYLFAGSIPISKVNSTVDHPSLFLGIIRGLMYGGLAFAVGFSTVVAIGGDASKRQVSGAGALFGGVVYTVLLALINFALQSEYPQIKNEQIPTLKLANEIHPWLGLVLTVIMLAVMYNTILGLTYSFAARFTEPYSKKYHIFIVIMMIAAFILSFVGFADLINFLYNIMGVVGLFIVVAVLIKYYLRKSDNKDHIA . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 59695 60762 . + . GCA_005502385.1_01305_mRNA GCA_005502385.1_01305 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MGLNKESIKIGFAYVGIVVGAGFSTGQEVMQFFTPYGLWSYIGVLISGLILGFIGRQVAKIGTAFEATNHESTLQYLFGEKFSKIFDYILVFFLFGIAVTMIAGSGATFEESFGIPTWLGALIMTVVIYLTLLLDFNKIVRALGFVTPFLIVMVVLIAIYYLFAGSIPISKVNSTVDHPSLFLGIIRGLMYGGLAFAVGFSTVVAIGGDASKRQVSGAGALFGGVVYTVLLALINFALQSEYPQIKNEQIPTLKLANEIHPWLGLVLTVIMLAVMYNTILGLTYSFAARFTEPYSKKYHIFIVIMMIAAFILSFVGFADLINFLYNIMGVVGLFIVVAVLIKYYLRKSDNKDHIA . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 59695 60762 . + 0 GCA_005502385.1_01305 GCA_005502385.1_01305_gene,GCA_005502385.1_01305_mRNA GCA_005502385.1_01305 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MGLNKESIKIGFAYVGIVVGAGFSTGQEVMQFFTPYGLWSYIGVLISGLILGFIGRQVAKIGTAFEATNHESTLQYLFGEKFSKIFDYILVFFLFGIAVTMIAGSGATFEESFGIPTWLGALIMTVVIYLTLLLDFNKIVRALGFVTPFLIVMVVLIAIYYLFAGSIPISKVNSTVDHPSLFLGIIRGLMYGGLAFAVGFSTVVAIGGDASKRQVSGAGALFGGVVYTVLLALINFALQSEYPQIKNEQIPTLKLANEIHPWLGLVLTVIMLAVMYNTILGLTYSFAARFTEPYSKKYHIFIVIMMIAAFILSFVGFADLINFLYNIMGVVGLFIVVAVLIKYYLRKSDNKDHIA persistent 355 Branched-chain amino acid transport system II carrier protein WP_049379654.1 UPI00066EAA8E UniRef100_UPI00066EAA8E,UniRef50_K9AMJ6,UniRef90_A0A974KX97 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 60897 61403 . - . GCA_005502385.1_01306_gene GCA_005502385.1_01306 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAHIIREISIKDTEALTTLLTKIYDESDYTLYNPGEFNPSVSSISNLLERVITSPRNTIYVAEEDDQLVGCIFVTTEKYERTQHEAIITLGVTKFYQKKGIGLALINAVEAWALNHNIKRLQASVVPENTNALMLLKGAGFNIEGELKNKLLINNQYFNKYIMAKLLL . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 60897 61403 . - . GCA_005502385.1_01306_mRNA GCA_005502385.1_01306 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAHIIREISIKDTEALTTLLTKIYDESDYTLYNPGEFNPSVSSISNLLERVITSPRNTIYVAEEDDQLVGCIFVTTEKYERTQHEAIITLGVTKFYQKKGIGLALINAVEAWALNHNIKRLQASVVPENTNALMLLKGAGFNIEGELKNKLLINNQYFNKYIMAKLLL . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 60897 61403 . - 0 GCA_005502385.1_01306 GCA_005502385.1_01306_gene,GCA_005502385.1_01306_mRNA GCA_005502385.1_01306 hypothetical protein """""" GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAHIIREISIKDTEALTTLLTKIYDESDYTLYNPGEFNPSVSSISNLLERVITSPRNTIYVAEEDDQLVGCIFVTTEKYERTQHEAIITLGVTKFYQKKGIGLALINAVEAWALNHNIKRLQASVVPENTNALMLLKGAGFNIEGELKNKLLINNQYFNKYIMAKLLL persistent 168 GNAT family N-acetyltransferase WP_049379653.1 UPI00066B3E01 UniRef100_UPI00066B3E01,UniRef50_Q2G0E2,UniRef90_A0A4Q9WRA0 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 61497 62420 . + . GCA_005502385.1_01307_gene GCA_005502385.1_01307 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKPNVLLAGGSGYIGKNISSVIENDANLFALSKYPNTKKEFNHNIKWLKKDIYNYEDVKSAMSGMNIAVFYLDPNKNSAKLTQATARDLNLIAADNFARAAAQQKINKILYVSGSRFDNETIQCLKNYGVPVETTETYIKRSHINVELQVSKYNDIRTALRMILPRKWSLEQLVAYFFKWLNDTRGTFLHTKYIENRYIIYARNEFKPLLVMKKEVNDNSLITFNLVGGSIIKKRSKKQGKLEFRQIKGTRLVIVQLYDYIPKLLWPLYYFFQAPVQGLIMRGFEIDCRIRHFNGRVQSGEKMKYTK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 61497 62420 . + . GCA_005502385.1_01307_mRNA GCA_005502385.1_01307 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKPNVLLAGGSGYIGKNISSVIENDANLFALSKYPNTKKEFNHNIKWLKKDIYNYEDVKSAMSGMNIAVFYLDPNKNSAKLTQATARDLNLIAADNFARAAAQQKINKILYVSGSRFDNETIQCLKNYGVPVETTETYIKRSHINVELQVSKYNDIRTALRMILPRKWSLEQLVAYFFKWLNDTRGTFLHTKYIENRYIIYARNEFKPLLVMKKEVNDNSLITFNLVGGSIIKKRSKKQGKLEFRQIKGTRLVIVQLYDYIPKLLWPLYYFFQAPVQGLIMRGFEIDCRIRHFNGRVQSGEKMKYTK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 61497 62420 . + 0 GCA_005502385.1_01307 GCA_005502385.1_01307_gene,GCA_005502385.1_01307_mRNA GCA_005502385.1_01307 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKPNVLLAGGSGYIGKNISSVIENDANLFALSKYPNTKKEFNHNIKWLKKDIYNYEDVKSAMSGMNIAVFYLDPNKNSAKLTQATARDLNLIAADNFARAAAQQKINKILYVSGSRFDNETIQCLKNYGVPVETTETYIKRSHINVELQVSKYNDIRTALRMILPRKWSLEQLVAYFFKWLNDTRGTFLHTKYIENRYIIYARNEFKPLLVMKKEVNDNSLITFNLVGGSIIKKRSKKQGKLEFRQIKGTRLVIVQLYDYIPKLLWPLYYFFQAPVQGLIMRGFEIDCRIRHFNGRVQSGEKMKYTK persistent 307 3-beta hydroxysteroid dehydrogenase WP_048761281.1 UPI000660E11D UniRef100_UPI000660E11D,UniRef50_Q2G0E1,UniRef90_A0A3S7GX44 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 62435 63109 . + . GCA_005502385.1_01308_gene GCA_005502385.1_01308 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MQILLVEDDQTLFQQLKKELENWNFFVYGVNDFSNVMETYHNVQPEIVIMDVQLPKYDGFYWCRQIRQVSNVPILFLSSRDNPMDQVMSMELGADDYMQKPFHTNVLIAKLQAIYRRVYQFGAEERRTLNWQDALVDLSKDSIQKGDKIIYLSKTEMIILEMLIQKQNQIVTRDTLITALWDDEAFVSDNTLTVNVNRLRKKLSEIDMETEIETKVGKGYMAHE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 62435 63109 . + . GCA_005502385.1_01308_mRNA GCA_005502385.1_01308 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MQILLVEDDQTLFQQLKKELENWNFFVYGVNDFSNVMETYHNVQPEIVIMDVQLPKYDGFYWCRQIRQVSNVPILFLSSRDNPMDQVMSMELGADDYMQKPFHTNVLIAKLQAIYRRVYQFGAEERRTLNWQDALVDLSKDSIQKGDKIIYLSKTEMIILEMLIQKQNQIVTRDTLITALWDDEAFVSDNTLTVNVNRLRKKLSEIDMETEIETKVGKGYMAHE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 62435 63109 . + 0 GCA_005502385.1_01308 GCA_005502385.1_01308_gene,GCA_005502385.1_01308_mRNA GCA_005502385.1_01308 Response regulator protein GraR GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MQILLVEDDQTLFQQLKKELENWNFFVYGVNDFSNVMETYHNVQPEIVIMDVQLPKYDGFYWCRQIRQVSNVPILFLSSRDNPMDQVMSMELGADDYMQKPFHTNVLIAKLQAIYRRVYQFGAEERRTLNWQDALVDLSKDSIQKGDKIIYLSKTEMIILEMLIQKQNQIVTRDTLITALWDDEAFVSDNTLTVNVNRLRKKLSEIDMETEIETKVGKGYMAHE persistent 224 graR response regulator transcription factor GraR/ApsR WP_049382100.1 UPI00066B83EF UniRef100_UPI00066B83EF,UniRef50_Q2G0E0,UniRef90_UPI0008D41550 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 63102 64142 . + . GCA_005502385.1_01309_gene GCA_005502385.1_01309 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSNVKWFWLFLKTRSNWIFWIIFLQFVFLGMAYIDYDMAIESVAYIVLLNIGLTCIFLIFTFLREVKLYQHFYNNKEIEEIKHKELAENPFQQEMVDYLYRKLLFQKERATEQQIHIQASEQSLTEFVHDIKTPVTAMKLLIDQVEDMERKKALLYEWSRVNELLDKQLYLTRLESKNRDMYFEKVPLKRLVIEEIQLTRHISQVKGIGYELEFDTNPEVFTDVKWCRMMIRQILSNSLKYSQGKDIVIRSFAKKDHIALEITDYGRGISAKDLPRIFERGYTSTANRNETTSSGIGLYLVESVRHPLGIEVEVESTVGEGTTFILTFPMQNEVIERMSQEKLSLS . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 63102 64142 . + . GCA_005502385.1_01309_mRNA GCA_005502385.1_01309 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSNVKWFWLFLKTRSNWIFWIIFLQFVFLGMAYIDYDMAIESVAYIVLLNIGLTCIFLIFTFLREVKLYQHFYNNKEIEEIKHKELAENPFQQEMVDYLYRKLLFQKERATEQQIHIQASEQSLTEFVHDIKTPVTAMKLLIDQVEDMERKKALLYEWSRVNELLDKQLYLTRLESKNRDMYFEKVPLKRLVIEEIQLTRHISQVKGIGYELEFDTNPEVFTDVKWCRMMIRQILSNSLKYSQGKDIVIRSFAKKDHIALEITDYGRGISAKDLPRIFERGYTSTANRNETTSSGIGLYLVESVRHPLGIEVEVESTVGEGTTFILTFPMQNEVIERMSQEKLSLS . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 63102 64142 . + 0 GCA_005502385.1_01309 GCA_005502385.1_01309_gene,GCA_005502385.1_01309_mRNA GCA_005502385.1_01309 Sensor histidine kinase GraS GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSNVKWFWLFLKTRSNWIFWIIFLQFVFLGMAYIDYDMAIESVAYIVLLNIGLTCIFLIFTFLREVKLYQHFYNNKEIEEIKHKELAENPFQQEMVDYLYRKLLFQKERATEQQIHIQASEQSLTEFVHDIKTPVTAMKLLIDQVEDMERKKALLYEWSRVNELLDKQLYLTRLESKNRDMYFEKVPLKRLVIEEIQLTRHISQVKGIGYELEFDTNPEVFTDVKWCRMMIRQILSNSLKYSQGKDIVIRSFAKKDHIALEITDYGRGISAKDLPRIFERGYTSTANRNETTSSGIGLYLVESVRHPLGIEVEVESTVGEGTTFILTFPMQNEVIERMSQEKLSLS persistent 346 histidine kinase 2.7.13.3 WP_048683078.1 UPI0006616311 UniRef100_UPI0006616311,UniRef50_Q8NXR5,UniRef90_A0A3S7GUB5 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 64333 65157 . + . GCA_005502385.1_01310_gene GCA_005502385.1_01310 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSQVHLYHSIVKIYDSEGHSKLTILQAKQIVKTYGTKQTIQEVLRGIDLNIETGEFVSIMGPSGSGKTTLLNVLSSIDYLSQGSVILNGKQLEKLSNKELSEIRKKDIGFIFQEYNLLHTLTVKENIMLPLSVLKLNKEEMNKRYRQITEALNIYDISDKYPSEISGGQRQRTSAARAFITYPKIIFADEPTGALDSKNTRDLLTRFEKINKIYDVTIIMVTHDPLAASFSNRVVMLKDGLIFTEIYQGQDNKQLFYEEILRAQSILGGKIYEF . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 64333 65157 . + . GCA_005502385.1_01310_mRNA GCA_005502385.1_01310 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSQVHLYHSIVKIYDSEGHSKLTILQAKQIVKTYGTKQTIQEVLRGIDLNIETGEFVSIMGPSGSGKTTLLNVLSSIDYLSQGSVILNGKQLEKLSNKELSEIRKKDIGFIFQEYNLLHTLTVKENIMLPLSVLKLNKEEMNKRYRQITEALNIYDISDKYPSEISGGQRQRTSAARAFITYPKIIFADEPTGALDSKNTRDLLTRFEKINKIYDVTIIMVTHDPLAASFSNRVVMLKDGLIFTEIYQGQDNKQLFYEEILRAQSILGGKIYEF . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 64333 65157 . + 0 GCA_005502385.1_01310 GCA_005502385.1_01310_gene,GCA_005502385.1_01310_mRNA GCA_005502385.1_01310 Bacitracin export ATP-binding protein BceA GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSQVHLYHSIVKIYDSEGHSKLTILQAKQIVKTYGTKQTIQEVLRGIDLNIETGEFVSIMGPSGSGKTTLLNVLSSIDYLSQGSVILNGKQLEKLSNKELSEIRKKDIGFIFQEYNLLHTLTVKENIMLPLSVLKLNKEEMNKRYRQITEALNIYDISDKYPSEISGGQRQRTSAARAFITYPKIIFADEPTGALDSKNTRDLLTRFEKINKIYDVTIIMVTHDPLAASFSNRVVMLKDGLIFTEIYQGQDNKQLFYEEILRAQSILGGKIYEF persistent 274 ABC transporter ATP-binding protein UniRef50_O34697,UniRef90_A0A1L8Y643 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 65147 67036 . + . GCA_005502385.1_01311_gene GCA_005502385.1_01311 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSFSYIIWRNFLRNIKHYAIYMFSLVISTVLYFSFITIKYVHHLHIHESLSMIREGSKIGSYFLFIIIVVFIMYTNILFIKRRSYELGLLQIMGLNKVSIIYMFMLEQLFIFLITAVLGVIIGIVGSKILLMIILKLLGIHTSVSLVFSVDAIIQTLFILIIAYILIILQAIIFLNKYSVTQLMESEEYIDETGKHITFGEIILGILGIVFILAGYYLSTRFVELLDDIVLPFIILFLTVIGAYFFFRSSVSLILKIIKSFKSGNVTVNDVIFTSSLMFRIRKNAFSLTIISIISAITVSVLCFAAISRGSLSKEISLESPYEVTTNNDILSEKLKYQLEQQHIAYNYNYKQVVYTHLYKDYLFDVNAARPYSVTVTSEDYFSNVSLKKGQADLIIPEDVIPELTKHRPHGTTLIGTKRHHTKVQLRKVIHKVYFKESIDLGGPTLVLNNEDYQFIKQHVKNKDIISQHGFDLKHTKDIPRLEKTINHMNQNLKTRSQIASEISSLTGILLFISSFLGIAFLIATGCIIYIKQIDETEDELENYSILRKLGFTQKDMDRGLKLKVAFNFGLPLAIALLHAYFAALVFMKFIGFTNQTSIFIVMIIYTIVYSMFAFIAYNHSKRTINHSI . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 65147 67036 . + . GCA_005502385.1_01311_mRNA GCA_005502385.1_01311 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSFSYIIWRNFLRNIKHYAIYMFSLVISTVLYFSFITIKYVHHLHIHESLSMIREGSKIGSYFLFIIIVVFIMYTNILFIKRRSYELGLLQIMGLNKVSIIYMFMLEQLFIFLITAVLGVIIGIVGSKILLMIILKLLGIHTSVSLVFSVDAIIQTLFILIIAYILIILQAIIFLNKYSVTQLMESEEYIDETGKHITFGEIILGILGIVFILAGYYLSTRFVELLDDIVLPFIILFLTVIGAYFFFRSSVSLILKIIKSFKSGNVTVNDVIFTSSLMFRIRKNAFSLTIISIISAITVSVLCFAAISRGSLSKEISLESPYEVTTNNDILSEKLKYQLEQQHIAYNYNYKQVVYTHLYKDYLFDVNAARPYSVTVTSEDYFSNVSLKKGQADLIIPEDVIPELTKHRPHGTTLIGTKRHHTKVQLRKVIHKVYFKESIDLGGPTLVLNNEDYQFIKQHVKNKDIISQHGFDLKHTKDIPRLEKTINHMNQNLKTRSQIASEISSLTGILLFISSFLGIAFLIATGCIIYIKQIDETEDELENYSILRKLGFTQKDMDRGLKLKVAFNFGLPLAIALLHAYFAALVFMKFIGFTNQTSIFIVMIIYTIVYSMFAFIAYNHSKRTINHSI . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 65147 67036 . + 0 GCA_005502385.1_01311 GCA_005502385.1_01311_gene,GCA_005502385.1_01311_mRNA GCA_005502385.1_01311 Bacitracin export permease protein BceB GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSFSYIIWRNFLRNIKHYAIYMFSLVISTVLYFSFITIKYVHHLHIHESLSMIREGSKIGSYFLFIIIVVFIMYTNILFIKRRSYELGLLQIMGLNKVSIIYMFMLEQLFIFLITAVLGVIIGIVGSKILLMIILKLLGIHTSVSLVFSVDAIIQTLFILIIAYILIILQAIIFLNKYSVTQLMESEEYIDETGKHITFGEIILGILGIVFILAGYYLSTRFVELLDDIVLPFIILFLTVIGAYFFFRSSVSLILKIIKSFKSGNVTVNDVIFTSSLMFRIRKNAFSLTIISIISAITVSVLCFAAISRGSLSKEISLESPYEVTTNNDILSEKLKYQLEQQHIAYNYNYKQVVYTHLYKDYLFDVNAARPYSVTVTSEDYFSNVSLKKGQADLIIPEDVIPELTKHRPHGTTLIGTKRHHTKVQLRKVIHKVYFKESIDLGGPTLVLNNEDYQFIKQHVKNKDIISQHGFDLKHTKDIPRLEKTINHMNQNLKTRSQIASEISSLTGILLFISSFLGIAFLIATGCIIYIKQIDETEDELENYSILRKLGFTQKDMDRGLKLKVAFNFGLPLAIALLHAYFAALVFMKFIGFTNQTSIFIVMIIYTIVYSMFAFIAYNHSKRTINHSI persistent 629 Bacitracin ABC transporter permease WP_017175998.1 UPI000377B2ED UniRef100_A0A3S7GU95,UniRef50_Q4L484,UniRef90_A0A3S7GU95 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 67298 67915 . + . GCA_005502385.1_01312_gene GCA_005502385.1_01312 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MFTKKKDKFMVQLEEMVFNLDRAAVEFGKMDFNTHLDLKAYSDNIKTYESHGDELMHKVISDLNQTFITPIEREDILSLCNAIDDVLDAMEETSGMFEMYSIEYTDEYMAEFVDNIQKAVAEMKLAVGLLVDKKLSHMRIHSINIKEFETNCDGILRQSIKHIFNSETDPITLIKIKDIYESLENIADKCQAVANNFETIIMKNS . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 67298 67915 . + . GCA_005502385.1_01312_mRNA GCA_005502385.1_01312 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MFTKKKDKFMVQLEEMVFNLDRAAVEFGKMDFNTHLDLKAYSDNIKTYESHGDELMHKVISDLNQTFITPIEREDILSLCNAIDDVLDAMEETSGMFEMYSIEYTDEYMAEFVDNIQKAVAEMKLAVGLLVDKKLSHMRIHSINIKEFETNCDGILRQSIKHIFNSETDPITLIKIKDIYESLENIADKCQAVANNFETIIMKNS . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 67298 67915 . + 0 GCA_005502385.1_01312 GCA_005502385.1_01312_gene,GCA_005502385.1_01312_mRNA GCA_005502385.1_01312 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MFTKKKDKFMVQLEEMVFNLDRAAVEFGKMDFNTHLDLKAYSDNIKTYESHGDELMHKVISDLNQTFITPIEREDILSLCNAIDDVLDAMEETSGMFEMYSIEYTDEYMAEFVDNIQKAVAEMKLAVGLLVDKKLSHMRIHSINIKEFETNCDGILRQSIKHIFNSETDPITLIKIKDIYESLENIADKCQAVANNFETIIMKNS persistent 205 ykaA DUF47 domain-containing protein COG1392,P WP_002449132.1 UPI00019FC2C0 UniRef100_A0A1L8Y656,UniRef50_A0A919WW74,UniRef90_Q2G0D6 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 67930 68934 . + . GCA_005502385.1_01313_gene GCA_005502385.1_01313 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEYVLVITIAIVAFSLVFDFINGFHDTANAIATAVSTRALTPRTAILLAAIMNFIGALTFTGVAGTITKDIVDPFKLQNGLVVVLAAIIAAIVWNLVTWLYGIPSSSSHALIGAIAGAAIAAQGFTVLHYQGFTKIIIVLIISPIIAFCVGFIMYTIVKIIFKNANLTRANRNFRFFQMFTAALQSFSHGTNDAQKSMGIITLALIVANLQDPSNVEPVLWVKIACATAMGLGTAIGGWKIIKTVGGNIMKIRPANGAAADLSSALTIFVASSLHFPLSTTHVVSSSILGVGASNRAKGVKWNTAQRMIITWIITLPISAILAAIIFWILNIFL . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 67930 68934 . + . GCA_005502385.1_01313_mRNA GCA_005502385.1_01313 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEYVLVITIAIVAFSLVFDFINGFHDTANAIATAVSTRALTPRTAILLAAIMNFIGALTFTGVAGTITKDIVDPFKLQNGLVVVLAAIIAAIVWNLVTWLYGIPSSSSHALIGAIAGAAIAAQGFTVLHYQGFTKIIIVLIISPIIAFCVGFIMYTIVKIIFKNANLTRANRNFRFFQMFTAALQSFSHGTNDAQKSMGIITLALIVANLQDPSNVEPVLWVKIACATAMGLGTAIGGWKIIKTVGGNIMKIRPANGAAADLSSALTIFVASSLHFPLSTTHVVSSSILGVGASNRAKGVKWNTAQRMIITWIITLPISAILAAIIFWILNIFL . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 67930 68934 . + 0 GCA_005502385.1_01313 GCA_005502385.1_01313_gene,GCA_005502385.1_01313_mRNA GCA_005502385.1_01313 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEYVLVITIAIVAFSLVFDFINGFHDTANAIATAVSTRALTPRTAILLAAIMNFIGALTFTGVAGTITKDIVDPFKLQNGLVVVLAAIIAAIVWNLVTWLYGIPSSSSHALIGAIAGAAIAAQGFTVLHYQGFTKIIIVLIISPIIAFCVGFIMYTIVKIIFKNANLTRANRNFRFFQMFTAALQSFSHGTNDAQKSMGIITLALIVANLQDPSNVEPVLWVKIACATAMGLGTAIGGWKIIKTVGGNIMKIRPANGAAADLSSALTIFVASSLHFPLSTTHVVSSSILGVGASNRAKGVKWNTAQRMIITWIITLPISAILAAIIFWILNIFL persistent 334 Phosphate transport protein WP_017175997.1 UPI0002F4B1B9 UniRef100_A0A3S7GXQ9,UniRef50_A0A2M9MMS4,UniRef90_A0A1D4GLB7 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 69004 69786 . - . GCA_005502385.1_01314_gene GCA_005502385.1_01314 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKLAFTLSIASGAVAFFSHHAEASTQHTVQPGDSLWSIANKYNTTIDELKRNNQLNGNLIFPGQVLTINGSSTTTSTTSSSLSSKSSTTYTVQSGDSLSRIANKYGTSVTNLMNANNLKNYLIYPGQVLKIPSSSSTTNSSSTNASPTFNHQNLYTAGQCTWYVFNRRAQAGLPISTYWSDAKYWTYNAASDGYIVNHTPTVGAIMQSTAGYYGHVAYVERVNPDGSILISEMNYTYGPYNTDTRVIPASLVSNYNYIH . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 69004 69786 . - . GCA_005502385.1_01314_mRNA GCA_005502385.1_01314 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKLAFTLSIASGAVAFFSHHAEASTQHTVQPGDSLWSIANKYNTTIDELKRNNQLNGNLIFPGQVLTINGSSTTTSTTSSSLSSKSSTTYTVQSGDSLSRIANKYGTSVTNLMNANNLKNYLIYPGQVLKIPSSSSTTNSSSTNASPTFNHQNLYTAGQCTWYVFNRRAQAGLPISTYWSDAKYWTYNAASDGYIVNHTPTVGAIMQSTAGYYGHVAYVERVNPDGSILISEMNYTYGPYNTDTRVIPASLVSNYNYIH . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 69004 69786 . - 0 GCA_005502385.1_01314 GCA_005502385.1_01314_gene,GCA_005502385.1_01314_mRNA GCA_005502385.1_01314 putative autolysin SsaALP GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKLAFTLSIASGAVAFFSHHAEASTQHTVQPGDSLWSIANKYNTTIDELKRNNQLNGNLIFPGQVLTINGSSTTTSTTSSSLSSKSSTTYTVQSGDSLSRIANKYGTSVTNLMNANNLKNYLIYPGQVLKIPSSSSTTNSSSTNASPTFNHQNLYTAGQCTWYVFNRRAQAGLPISTYWSDAKYWTYNAASDGYIVNHTPTVGAIMQSTAGYYGHVAYVERVNPDGSILISEMNYTYGPYNTDTRVIPASLVSNYNYIH persistent 260 lysM LysM peptidoglycan-binding domain-containing protein WP_017175996.1 UPI0002ECD2EF UniRef100_A0A3S7GTX0,UniRef50_Q2G0D4,UniRef90_A0A3S7GTX0 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 70232 70900 . + . GCA_005502385.1_01315_gene GCA_005502385.1_01315 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MPSSSNLVNHQHQNARSKDNTQQNHAYRKVWLFFTYYWLIFGIGCYLGQYLPVEWRRPLSITLFVIVLATLFIKRARKYGLIISHIYAIIIGLLSYATFSMYMQNLGADVFYKNILLAIIAFIVFGILGYFVINDASSLGKYLFVTLIALIIASLVGLFIRNSLFHIVITMVSLVLFLLYTLFDFNRMKHGRFTPREMGFNLFLNLLNIIKDILNLANRFKN . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 70232 70900 . + . GCA_005502385.1_01315_mRNA GCA_005502385.1_01315 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MPSSSNLVNHQHQNARSKDNTQQNHAYRKVWLFFTYYWLIFGIGCYLGQYLPVEWRRPLSITLFVIVLATLFIKRARKYGLIISHIYAIIIGLLSYATFSMYMQNLGADVFYKNILLAIIAFIVFGILGYFVINDASSLGKYLFVTLIALIIASLVGLFIRNSLFHIVITMVSLVLFLLYTLFDFNRMKHGRFTPREMGFNLFLNLLNIIKDILNLANRFKN . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 70232 70900 . + 0 GCA_005502385.1_01315 GCA_005502385.1_01315_gene,GCA_005502385.1_01315_mRNA GCA_005502385.1_01315 putative protein YetJ GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MPSSSNLVNHQHQNARSKDNTQQNHAYRKVWLFFTYYWLIFGIGCYLGQYLPVEWRRPLSITLFVIVLATLFIKRARKYGLIISHIYAIIIGLLSYATFSMYMQNLGADVFYKNILLAIIAFIVFGILGYFVINDASSLGKYLFVTLIALIIASLVGLFIRNSLFHIVITMVSLVLFLLYTLFDFNRMKHGRFTPREMGFNLFLNLLNIIKDILNLANRFKN persistent 222 Transporter WP_049382101.1 UPI00066E4419 UniRef100_UPI00066E4419,UniRef50_Q2G0D3,UniRef90_A0A974QN77 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 71203 73341 . + . GCA_005502385.1_01316_gene GCA_005502385.1_01316 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSNGYFHVLTKHEYQMTRCQDGIILLFPIKDSLEIQHFAKKVTINNDIYVINNKDIFSINKNEKTIMIYIASDWFKEEGFNFFDYKYSINLVKSINAIKKALLQITMNHINHKSVSEDNKYIVDIVQIIGRQGSVEIDIANDQYNYAYYGELSEVLDYINENIEKKLTLKDVSSNLFTSKSNLSSQFTQLLNISFKTYVDTLKIANSFELLLKTNDTISLISEKVGFSNASSYSKTFKSYMGMTPNEYRSCNKYEKMIFMDYETHIDDSLQNIRDMIQSQQYYYQKKTEHKIYIDSKLDTFIKPYQCVVQINTIEEIKLLFLEKYIDYLDESPSLMIYVRADMKEIKEHFTVKELQRIFEYIIRKNLNISFKLEDLNLIDFLEMTYENVLDYLEINQVEVNVNHELGIVFDLEKIDLKAIYRMILKIQHKTNRFSFGLEISKLLNNPVLFKTLESQIKRVNFQFLFIDNSKLNQPYLIEGNNRLLVKNILHYQNIREILNHIDLENQRIIFLNVENHVFLNSEYNDLNSSAPLIVETNIKSAQHFDGIGFNFRQDSHQFNALHLFDEKGFKTILGTMMAHIMTLSQEPKYIKDHYIVIEKENKFILFIYDWRVLESESRNANYEKTDIYVDFKHKTNKNHLIKIQQIDDYNGNINHIITEDIRNRYQWSKTFLKKVNRLLHPSFKIREHNFNKEALQIKLDYNGLYIIEIYK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 71203 73341 . + . GCA_005502385.1_01316_mRNA GCA_005502385.1_01316 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSNGYFHVLTKHEYQMTRCQDGIILLFPIKDSLEIQHFAKKVTINNDIYVINNKDIFSINKNEKTIMIYIASDWFKEEGFNFFDYKYSINLVKSINAIKKALLQITMNHINHKSVSEDNKYIVDIVQIIGRQGSVEIDIANDQYNYAYYGELSEVLDYINENIEKKLTLKDVSSNLFTSKSNLSSQFTQLLNISFKTYVDTLKIANSFELLLKTNDTISLISEKVGFSNASSYSKTFKSYMGMTPNEYRSCNKYEKMIFMDYETHIDDSLQNIRDMIQSQQYYYQKKTEHKIYIDSKLDTFIKPYQCVVQINTIEEIKLLFLEKYIDYLDESPSLMIYVRADMKEIKEHFTVKELQRIFEYIIRKNLNISFKLEDLNLIDFLEMTYENVLDYLEINQVEVNVNHELGIVFDLEKIDLKAIYRMILKIQHKTNRFSFGLEISKLLNNPVLFKTLESQIKRVNFQFLFIDNSKLNQPYLIEGNNRLLVKNILHYQNIREILNHIDLENQRIIFLNVENHVFLNSEYNDLNSSAPLIVETNIKSAQHFDGIGFNFRQDSHQFNALHLFDEKGFKTILGTMMAHIMTLSQEPKYIKDHYIVIEKENKFILFIYDWRVLESESRNANYEKTDIYVDFKHKTNKNHLIKIQQIDDYNGNINHIITEDIRNRYQWSKTFLKKVNRLLHPSFKIREHNFNKEALQIKLDYNGLYIIEIYK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 71203 73341 . + 0 GCA_005502385.1_01316 GCA_005502385.1_01316_gene,GCA_005502385.1_01316_mRNA GCA_005502385.1_01316 HTH-type transcriptional activator RhaR GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSNGYFHVLTKHEYQMTRCQDGIILLFPIKDSLEIQHFAKKVTINNDIYVINNKDIFSINKNEKTIMIYIASDWFKEEGFNFFDYKYSINLVKSINAIKKALLQITMNHINHKSVSEDNKYIVDIVQIIGRQGSVEIDIANDQYNYAYYGELSEVLDYINENIEKKLTLKDVSSNLFTSKSNLSSQFTQLLNISFKTYVDTLKIANSFELLLKTNDTISLISEKVGFSNASSYSKTFKSYMGMTPNEYRSCNKYEKMIFMDYETHIDDSLQNIRDMIQSQQYYYQKKTEHKIYIDSKLDTFIKPYQCVVQINTIEEIKLLFLEKYIDYLDESPSLMIYVRADMKEIKEHFTVKELQRIFEYIIRKNLNISFKLEDLNLIDFLEMTYENVLDYLEINQVEVNVNHELGIVFDLEKIDLKAIYRMILKIQHKTNRFSFGLEISKLLNNPVLFKTLESQIKRVNFQFLFIDNSKLNQPYLIEGNNRLLVKNILHYQNIREILNHIDLENQRIIFLNVENHVFLNSEYNDLNSSAPLIVETNIKSAQHFDGIGFNFRQDSHQFNALHLFDEKGFKTILGTMMAHIMTLSQEPKYIKDHYIVIEKENKFILFIYDWRVLESESRNANYEKTDIYVDFKHKTNKNHLIKIQQIDDYNGNINHIITEDIRNRYQWSKTFLKKVNRLLHPSFKIREHNFNKEALQIKLDYNGLYIIEIYK persistent 712 Helix-turn-helix domain-containing protein WP_049382102.1 UPI00066AF6F0 UniRef100_UPI00066AF6F0,UniRef50_Q4L489,UniRef90_A0A8X8GIH2 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 73491 73850 . + . GCA_005502385.1_01317_gene GCA_005502385.1_01317 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSNDELNRLLKIYKQYKALSEYIEKEYKLTLNDLALLKLAYEYTADDQILMQTFLKVAIEELELSRTKLLVSIRRLIEKEKLSKVRSTEDERKIFIYMNKSNIDQFNALFNDVERFLDN . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 73491 73850 . + . GCA_005502385.1_01317_mRNA GCA_005502385.1_01317 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSNDELNRLLKIYKQYKALSEYIEKEYKLTLNDLALLKLAYEYTADDQILMQTFLKVAIEELELSRTKLLVSIRRLIEKEKLSKVRSTEDERKIFIYMNKSNIDQFNALFNDVERFLDN . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 73491 73850 . + 0 GCA_005502385.1_01317 GCA_005502385.1_01317_gene,GCA_005502385.1_01317_mRNA GCA_005502385.1_01317 HTH-type transcriptional regulator SarX GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSNDELNRLLKIYKQYKALSEYIEKEYKLTLNDLALLKLAYEYTADDQILMQTFLKVAIEELELSRTKLLVSIRRLIEKEKLSKVRSTEDERKIFIYMNKSNIDQFNALFNDVERFLDN persistent 119 marR MarR family transcriptional regulator WP_002449574.1 UPI00019FCB9D UniRef100_A0A6B8SHX9,UniRef50_Q2G0D1,UniRef90_A0A6B8SHX9 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 73995 74711 . + . GCA_005502385.1_01318_gene GCA_005502385.1_01318 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MGRKWNNIKEKKAQKDKNTSRIYAKFGKEIYVAAKSGEPDPESNQALRLVLERAKTYSVPNHIIDRAIDKAKGGGDENYDHLRYEGFGPSGSMLIVDALTNNVNRTASDVRAAFGKNGGNMGVSGSVAYMFDHTATFGVEGKSADDVLETLMEQDVDVRDVIEEDGLTIVYAEPDQFAQVQEVLRQSGVEDFKIAEFEMLPQTDIELSADDQATLEKLIDALEDLEDVQNVFHNVDLK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 73995 74711 . + . GCA_005502385.1_01318_mRNA GCA_005502385.1_01318 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MGRKWNNIKEKKAQKDKNTSRIYAKFGKEIYVAAKSGEPDPESNQALRLVLERAKTYSVPNHIIDRAIDKAKGGGDENYDHLRYEGFGPSGSMLIVDALTNNVNRTASDVRAAFGKNGGNMGVSGSVAYMFDHTATFGVEGKSADDVLETLMEQDVDVRDVIEEDGLTIVYAEPDQFAQVQEVLRQSGVEDFKIAEFEMLPQTDIELSADDQATLEKLIDALEDLEDVQNVFHNVDLK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 73995 74711 . + 0 GCA_005502385.1_01318 GCA_005502385.1_01318_gene,GCA_005502385.1_01318_mRNA GCA_005502385.1_01318 putative transcriptional regulatory protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MGRKWNNIKEKKAQKDKNTSRIYAKFGKEIYVAAKSGEPDPESNQALRLVLERAKTYSVPNHIIDRAIDKAKGGGDENYDHLRYEGFGPSGSMLIVDALTNNVNRTASDVRAAFGKNGGNMGVSGSVAYMFDHTATFGVEGKSADDVLETLMEQDVDVRDVIEEDGLTIVYAEPDQFAQVQEVLRQSGVEDFKIAEFEMLPQTDIELSADDQATLEKLIDALEDLEDVQNVFHNVDLK persistent 238 YebC/PmpR family DNA-binding transcriptional regulator WP_049382103.1 UPI00066B7A70 UniRef100_UPI00066B7A70,UniRef50_P0A8A2,UniRef90_A0A853V3L9 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 74711 75202 . + . GCA_005502385.1_01319_gene GCA_005502385.1_01319 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKHTASFWIQSLDLESHPEGGYYKETIRPEGVKKDERASFSSILFLLKADDISHFHRIDADEVWYYHAGVSLEIHMLTEDGQYRSVLLGPNVDHGEVLQYVVPKGTIFASSVPHSEGYSLVGCMCQPAFEFKYFELFTQDELIEVYPQYRRMIQKYALKNIEY . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 74711 75202 . + . GCA_005502385.1_01319_mRNA GCA_005502385.1_01319 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKHTASFWIQSLDLESHPEGGYYKETIRPEGVKKDERASFSSILFLLKADDISHFHRIDADEVWYYHAGVSLEIHMLTEDGQYRSVLLGPNVDHGEVLQYVVPKGTIFASSVPHSEGYSLVGCMCQPAFEFKYFELFTQDELIEVYPQYRRMIQKYALKNIEY . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 74711 75202 . + 0 GCA_005502385.1_01319 GCA_005502385.1_01319_gene,GCA_005502385.1_01319_mRNA GCA_005502385.1_01319 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKHTASFWIQSLDLESHPEGGYYKETIRPEGVKKDERASFSSILFLLKADDISHFHRIDADEVWYYHAGVSLEIHMLTEDGQYRSVLLGPNVDHGEVLQYVVPKGTIFASSVPHSEGYSLVGCMCQPAFEFKYFELFTQDELIEVYPQYRRMIQKYALKNIEY persistent 163 Cupin WP_137689585.1 UPI0010F79681 UniRef100_UPI0010F79681,UniRef50_Q2G0C9,UniRef90_A0A3S7GUA5 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 75296 76087 . - . GCA_005502385.1_01320_gene GCA_005502385.1_01320 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDKVSFNSNHPHFEHFKFLYKKVAGRATAKVSIPSPNQLFHPNILNETIYPNIEDFANDIAKVYHETLQAFYDLGARYIQLDDVYWAGLTDGTQKVRGRQRSEDEKLKARDLAYKVINKAIEGLPNDLILTTHICRGNYKSTWAISGGYEAIAPYLFKENLNGFFLEYDDERSGDFEPLRFFNDNAYAVLGLITSKTGELENKDTIKKRIKEAEQYVNIDHICISPQCGFASTEEGNALTEQEQWNKLAYVVELANELFGTAE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 75296 76087 . - . GCA_005502385.1_01320_mRNA GCA_005502385.1_01320 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDKVSFNSNHPHFEHFKFLYKKVAGRATAKVSIPSPNQLFHPNILNETIYPNIEDFANDIAKVYHETLQAFYDLGARYIQLDDVYWAGLTDGTQKVRGRQRSEDEKLKARDLAYKVINKAIEGLPNDLILTTHICRGNYKSTWAISGGYEAIAPYLFKENLNGFFLEYDDERSGDFEPLRFFNDNAYAVLGLITSKTGELENKDTIKKRIKEAEQYVNIDHICISPQCGFASTEEGNALTEQEQWNKLAYVVELANELFGTAE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 75296 76087 . - 0 GCA_005502385.1_01320 GCA_005502385.1_01320_gene,GCA_005502385.1_01320_mRNA GCA_005502385.1_01320 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDKVSFNSNHPHFEHFKFLYKKVAGRATAKVSIPSPNQLFHPNILNETIYPNIEDFANDIAKVYHETLQAFYDLGARYIQLDDVYWAGLTDGTQKVRGRQRSEDEKLKARDLAYKVINKAIEGLPNDLILTTHICRGNYKSTWAISGGYEAIAPYLFKENLNGFFLEYDDERSGDFEPLRFFNDNAYAVLGLITSKTGELENKDTIKKRIKEAEQYVNIDHICISPQCGFASTEEGNALTEQEQWNKLAYVVELANELFGTAE persistent 263 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase UniRef50_UPI00203FD002 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 76154 76399 . - . GCA_005502385.1_01321_gene GCA_005502385.1_01321 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTVRPFRADHVGSLLRPKRLKEARFKFNNNELSLEELTRIEDEEIERIIEKQIEIGLHSITDGEFRRSWWHFDFLENINGV . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 76154 76399 . - . GCA_005502385.1_01321_mRNA GCA_005502385.1_01321 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTVRPFRADHVGSLLRPKRLKEARFKFNNNELSLEELTRIEDEEIERIIEKQIEIGLHSITDGEFRRSWWHFDFLENINGV . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 76154 76399 . - 0 GCA_005502385.1_01321 GCA_005502385.1_01321_gene,GCA_005502385.1_01321_mRNA GCA_005502385.1_01321 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTVRPFRADHVGSLLRPKRLKEARFKFNNNELSLEELTRIEDEEIERIIEKQIEIGLHSITDGEFRRSWWHFDFLENINGV persistent 81 hypothetical protein . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 76614 77171 . + . GCA_005502385.1_01322_gene GCA_005502385.1_01322 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKIKYIDKRHWRRLIERDYIEVKVNNNRFKGIIGLVTMKKVREPLEVTVVDQNVVVVDNNYKWLQILPEKKRYSITAMFDDKGNPLEYYFDINIKNITQKGNARTLDLFLDVLVLPSTGEYELVDEHDLELALKNGQITKKQYHEAYIIAHQLMIEIEDNFAEIHHRIMHCYKKMIGKLNKHKKA . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 76614 77171 . + . GCA_005502385.1_01322_mRNA GCA_005502385.1_01322 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKIKYIDKRHWRRLIERDYIEVKVNNNRFKGIIGLVTMKKVREPLEVTVVDQNVVVVDNNYKWLQILPEKKRYSITAMFDDKGNPLEYYFDINIKNITQKGNARTLDLFLDVLVLPSTGEYELVDEHDLELALKNGQITKKQYHEAYIIAHQLMIEIEDNFAEIHHRIMHCYKKMIGKLNKHKKA . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 76614 77171 . + 0 GCA_005502385.1_01322 GCA_005502385.1_01322_gene,GCA_005502385.1_01322_mRNA GCA_005502385.1_01322 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKIKYIDKRHWRRLIERDYIEVKVNNNRFKGIIGLVTMKKVREPLEVTVVDQNVVVVDNNYKWLQILPEKKRYSITAMFDDKGNPLEYYFDINIKNITQKGNARTLDLFLDVLVLPSTGEYELVDEHDLELALKNGQITKKQYHEAYIIAHQLMIEIEDNFAEIHHRIMHCYKKMIGKLNKHKKA persistent 185 DUF402 domain-containing protein WP_017175988.1 UPI0002F210AD UniRef100_A0A1L8Y453,UniRef50_Q5HR66,UniRef90_A0A533J1R3 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 77264 78118 . + . GCA_005502385.1_01323_gene GCA_005502385.1_01323 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKIEDYQLLITLDETKTLRKAAEILYISQPAVTQRLKAIEHAFGVEIFIRTKKQLITTTEGAMIIEHARDMLNREKMFFDKIQAHIGEVNGTISIGCSSLIGQTILPRVLSLYNTQFPNVEIQVQVGSTEQIRSNHRDYHLLITRGNKVMNLKNIHLFDDEHYFIYPKERHEDVSKLPFIEFQADPIYINQINHWYSEKFGQDYHATITVDQVATCKEMLISGVGVTILPEIMMKNIDHHVFEFEKVNIDGLPLIRSTYMSYDSSILQLPQVDAFVSLMLNFTK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 77264 78118 . + . GCA_005502385.1_01323_mRNA GCA_005502385.1_01323 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKIEDYQLLITLDETKTLRKAAEILYISQPAVTQRLKAIEHAFGVEIFIRTKKQLITTTEGAMIIEHARDMLNREKMFFDKIQAHIGEVNGTISIGCSSLIGQTILPRVLSLYNTQFPNVEIQVQVGSTEQIRSNHRDYHLLITRGNKVMNLKNIHLFDDEHYFIYPKERHEDVSKLPFIEFQADPIYINQINHWYSEKFGQDYHATITVDQVATCKEMLISGVGVTILPEIMMKNIDHHVFEFEKVNIDGLPLIRSTYMSYDSSILQLPQVDAFVSLMLNFTK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 77264 78118 . + 0 GCA_005502385.1_01323 GCA_005502385.1_01323_gene,GCA_005502385.1_01323_mRNA GCA_005502385.1_01323 Hydrogen peroxide-inducible genes activator GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKIEDYQLLITLDETKTLRKAAEILYISQPAVTQRLKAIEHAFGVEIFIRTKKQLITTTEGAMIIEHARDMLNREKMFFDKIQAHIGEVNGTISIGCSSLIGQTILPRVLSLYNTQFPNVEIQVQVGSTEQIRSNHRDYHLLITRGNKVMNLKNIHLFDDEHYFIYPKERHEDVSKLPFIEFQADPIYINQINHWYSEKFGQDYHATITVDQVATCKEMLISGVGVTILPEIMMKNIDHHVFEFEKVNIDGLPLIRSTYMSYDSSILQLPQVDAFVSLMLNFTK persistent 284 lysR LysR family transcriptional regulator WP_017175987.1 UPI0002F750D2 UniRef100_A0A1L8Y449,UniRef50_Q2G0C6,UniRef90_A0A1L8Y449 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 78165 79385 . + . GCA_005502385.1_01324_gene GCA_005502385.1_01324 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MFSALLHIKNYKLFLINMMLLGMGIAITVPYFVLFATNELGMSTNQFGVLLALAAVSQFTVNAIVARFSDTHHLNRKILIICALFMGALSFSIYFYIHHIWLFIIVYAIFQGLFAPAMPQLYASARESINASSSRNNAKFANTVLRSMFSFGFLFGPLIGAYLIQFMGYAGLFGGTVIILLFTLLLQIFFYKDLNLTINEQVKDTASIEITAPNMLKDKALFIPFIAFILLHIGQWMYTMNMPLFVTEYLKEREGYVGTLASLCAGLEVPFMVILGILASKLSTRTLLILGAISGGLFYFSIGIFENIYMMMIGQVFLAFYLAILLGLGISYFQDILPDFPGYASTLFANAMVIGQLCGNLLGGVMSHWVGLENVFYVSALSIFIGMILILFTKDQKFTSSTMNIQ . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 78165 79385 . + . GCA_005502385.1_01324_mRNA GCA_005502385.1_01324 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MFSALLHIKNYKLFLINMMLLGMGIAITVPYFVLFATNELGMSTNQFGVLLALAAVSQFTVNAIVARFSDTHHLNRKILIICALFMGALSFSIYFYIHHIWLFIIVYAIFQGLFAPAMPQLYASARESINASSSRNNAKFANTVLRSMFSFGFLFGPLIGAYLIQFMGYAGLFGGTVIILLFTLLLQIFFYKDLNLTINEQVKDTASIEITAPNMLKDKALFIPFIAFILLHIGQWMYTMNMPLFVTEYLKEREGYVGTLASLCAGLEVPFMVILGILASKLSTRTLLILGAISGGLFYFSIGIFENIYMMMIGQVFLAFYLAILLGLGISYFQDILPDFPGYASTLFANAMVIGQLCGNLLGGVMSHWVGLENVFYVSALSIFIGMILILFTKDQKFTSSTMNIQ . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 78165 79385 . + 0 GCA_005502385.1_01324 GCA_005502385.1_01324_gene,GCA_005502385.1_01324_mRNA GCA_005502385.1_01324 Sugar efflux transporter A GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MFSALLHIKNYKLFLINMMLLGMGIAITVPYFVLFATNELGMSTNQFGVLLALAAVSQFTVNAIVARFSDTHHLNRKILIICALFMGALSFSIYFYIHHIWLFIIVYAIFQGLFAPAMPQLYASARESINASSSRNNAKFANTVLRSMFSFGFLFGPLIGAYLIQFMGYAGLFGGTVIILLFTLLLQIFFYKDLNLTINEQVKDTASIEITAPNMLKDKALFIPFIAFILLHIGQWMYTMNMPLFVTEYLKEREGYVGTLASLCAGLEVPFMVILGILASKLSTRTLLILGAISGGLFYFSIGIFENIYMMMIGQVFLAFYLAILLGLGISYFQDILPDFPGYASTLFANAMVIGQLCGNLLGGVMSHWVGLENVFYVSALSIFIGMILILFTKDQKFTSSTMNIQ persistent 406 MFS transporter WP_017175986.1 UPI0003766EBD UniRef100_A0A1L8Y447,UniRef50_B9EA75,UniRef90_A0A974KXA8 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 79571 80260 . - . GCA_005502385.1_01325_gene GCA_005502385.1_01325 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKSTATLARENNVKSMRLNNTDREIFENYMTYIRSDLRVNPHDSELMLNRILKELLAAENDGTLALEFFDHDPKAHAKKQLKSLPNETFKNIVKSIFRNFIFLMGIFFFFKGFIGFFVPDNHNEVYLYTFPITLIIGLTIIFLFILVVFKTVQLQCFNNSHWIWWFNYCIIALLVVALFYVFFIPQSFLAYGPSIQINNWAFIIISIIITPIAFYIEHHFVDEDSNTVL . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 79571 80260 . - . GCA_005502385.1_01325_mRNA GCA_005502385.1_01325 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKSTATLARENNVKSMRLNNTDREIFENYMTYIRSDLRVNPHDSELMLNRILKELLAAENDGTLALEFFDHDPKAHAKKQLKSLPNETFKNIVKSIFRNFIFLMGIFFFFKGFIGFFVPDNHNEVYLYTFPITLIIGLTIIFLFILVVFKTVQLQCFNNSHWIWWFNYCIIALLVVALFYVFFIPQSFLAYGPSIQINNWAFIIISIIITPIAFYIEHHFVDEDSNTVL . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 79571 80260 . - 0 GCA_005502385.1_01325 GCA_005502385.1_01325_gene,GCA_005502385.1_01325_mRNA GCA_005502385.1_01325 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKSTATLARENNVKSMRLNNTDREIFENYMTYIRSDLRVNPHDSELMLNRILKELLAAENDGTLALEFFDHDPKAHAKKQLKSLPNETFKNIVKSIFRNFIFLMGIFFFFKGFIGFFVPDNHNEVYLYTFPITLIIGLTIIFLFILVVFKTVQLQCFNNSHWIWWFNYCIIALLVVALFYVFFIPQSFLAYGPSIQINNWAFIIISIIITPIAFYIEHHFVDEDSNTVL persistent 229 DUF1129 domain-containing protein WP_017175985.1 UPI0002D6C38C UniRef100_A0A4Q9WRW0,UniRef50_Q49VL9,UniRef90_A0AAE5MZ86 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 80383 80835 . + . GCA_005502385.1_01326_gene GCA_005502385.1_01326 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRSLSITDDQLIENIASIHEYYLEKSGLNYHATTLSIALRQEMIERRLNMNQDIIYVIESKHDFREPSAFIWGHFETSTKVVTIEMLYTHPHCRNSGIATNLKLALEQWAIEKDAHSIESTVDANNEQMIHINREQGYDITHVKMRKDLK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 80383 80835 . + . GCA_005502385.1_01326_mRNA GCA_005502385.1_01326 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRSLSITDDQLIENIASIHEYYLEKSGLNYHATTLSIALRQEMIERRLNMNQDIIYVIESKHDFREPSAFIWGHFETSTKVVTIEMLYTHPHCRNSGIATNLKLALEQWAIEKDAHSIESTVDANNEQMIHINREQGYDITHVKMRKDLK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 80383 80835 . + 0 GCA_005502385.1_01326 GCA_005502385.1_01326_gene,GCA_005502385.1_01326_mRNA GCA_005502385.1_01326 hypothetical protein """""" GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRSLSITDDQLIENIASIHEYYLEKSGLNYHATTLSIALRQEMIERRLNMNQDIIYVIESKHDFREPSAFIWGHFETSTKVVTIEMLYTHPHCRNSGIATNLKLALEQWAIEKDAHSIESTVDANNEQMIHINREQGYDITHVKMRKDLK persistent 150 GNAT family N-acetyltransferase WP_019834911.1 UPI00036E3DF5 UniRef100_UPI00036E3DF5,UniRef50_A0A7Z1N847,UniRef90_A0A3S7GTW1 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 80903 81280 . + . GCA_005502385.1_01327_gene GCA_005502385.1_01327 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKWIVLLLLATLILSACGKSEEKVSLENDIKQLEKENKDLKNEKNNLEKQKEKLNAQREKLQKEVDSSVAKESVKQETEKSKKDNSSQTNLSNESSSSTEEQSSDSNSEQSSNNTSSSSSTENN . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 80903 81280 . + . GCA_005502385.1_01327_mRNA GCA_005502385.1_01327 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKWIVLLLLATLILSACGKSEEKVSLENDIKQLEKENKDLKNEKNNLEKQKEKLNAQREKLQKEVDSSVAKESVKQETEKSKKDNSSQTNLSNESSSSTEEQSSDSNSEQSSNNTSSSSSTENN . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 80903 81280 . + 0 GCA_005502385.1_01327 GCA_005502385.1_01327_gene,GCA_005502385.1_01327_mRNA GCA_005502385.1_01327 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKWIVLLLLATLILSACGKSEEKVSLENDIKQLEKENKDLKNEKNNLEKQKEKLNAQREKLQKEVDSSVAKESVKQETEKSKKDNSSQTNLSNESSSSTEEQSSDSNSEQSSNNTSSSSSTENN persistent 125 SA0632 family lipoprotein WP_017175983.1 UPI0002DCC238 UniRef100_A0A4Q9WU76,UniRef50_A0A974KYI6,UniRef90_A0A974KYI6 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 81435 81731 . + . GCA_005502385.1_01328_gene GCA_005502385.1_01328 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MHEHDFQILEGRDLTLPELGKEIENITGRTVTHSTGDIKRVVAHLPNFESESDTFVATFKLNHRNDYIDATFVAPKNQRDKLKEIPVHIELISYISKN . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 81435 81731 . + . GCA_005502385.1_01328_mRNA GCA_005502385.1_01328 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MHEHDFQILEGRDLTLPELGKEIENITGRTVTHSTGDIKRVVAHLPNFESESDTFVATFKLNHRNDYIDATFVAPKNQRDKLKEIPVHIELISYISKN . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 81435 81731 . + 0 GCA_005502385.1_01328 GCA_005502385.1_01328_gene,GCA_005502385.1_01328_mRNA GCA_005502385.1_01328 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MHEHDFQILEGRDLTLPELGKEIENITGRTVTHSTGDIKRVVAHLPNFESESDTFVATFKLNHRNDYIDATFVAPKNQRDKLKEIPVHIELISYISKN persistent 98 Phage protein WP_017175982.1 UPI000315C5C4 UniRef100_A0A4Q9WRF8,UniRef50_A0A240BWH3,UniRef90_A0A4Q9WRF8 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 81832 82377 . + . GCA_005502385.1_01329_gene GCA_005502385.1_01329 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MVVYIETERLRLRDWEEKDLLSFQKMNANPQVRRYFPSLLSYRRSELDMQRMDDILKGKGIGLFAVELKETGAWLGYIGLNYLPKDSKYPFENLPIYEIGWRLIPEVWGNGIATEGAMAVLEYAKEKGIEEVFSLTAEGNLASRKVMEKIGMSLFDYFELPDLSKYHPLKRHVRYQKKLNI . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 81832 82377 . + . GCA_005502385.1_01329_mRNA GCA_005502385.1_01329 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MVVYIETERLRLRDWEEKDLLSFQKMNANPQVRRYFPSLLSYRRSELDMQRMDDILKGKGIGLFAVELKETGAWLGYIGLNYLPKDSKYPFENLPIYEIGWRLIPEVWGNGIATEGAMAVLEYAKEKGIEEVFSLTAEGNLASRKVMEKIGMSLFDYFELPDLSKYHPLKRHVRYQKKLNI . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 81832 82377 . + 0 GCA_005502385.1_01329 GCA_005502385.1_01329_gene,GCA_005502385.1_01329_mRNA GCA_005502385.1_01329 Acetyltransferase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MVVYIETERLRLRDWEEKDLLSFQKMNANPQVRRYFPSLLSYRRSELDMQRMDDILKGKGIGLFAVELKETGAWLGYIGLNYLPKDSKYPFENLPIYEIGWRLIPEVWGNGIATEGAMAVLEYAKEKGIEEVFSLTAEGNLASRKVMEKIGMSLFDYFELPDLSKYHPLKRHVRYQKKLNI persistent 181 GNAT family N-acetyltransferase WP_049382106.1 UPI00066D11D9 UniRef100_UPI00066D11D9,UniRef50_S2Y7I5,UniRef90_A0A1L8Y455 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 82606 83172 . - . GCA_005502385.1_01330_gene GCA_005502385.1_01330 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKRIAVYCGASKGNNPIYVKEAYQLGKYMAEQGYELIFGAGSVGIMGAIQDGVLDYGGRAIGVMPKMLDEREITSQKVSELILVDSMHERKEKMTELADAFVMAPGGAGSLEEFFEMYSWAQIGIHQKPIGIFNLNGFFNPLQILIDHMIEEGFIDKKYKELAPLYDTKEALIDGLLNYKPLGVRTYD . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 82606 83172 . - . GCA_005502385.1_01330_mRNA GCA_005502385.1_01330 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKRIAVYCGASKGNNPIYVKEAYQLGKYMAEQGYELIFGAGSVGIMGAIQDGVLDYGGRAIGVMPKMLDEREITSQKVSELILVDSMHERKEKMTELADAFVMAPGGAGSLEEFFEMYSWAQIGIHQKPIGIFNLNGFFNPLQILIDHMIEEGFIDKKYKELAPLYDTKEALIDGLLNYKPLGVRTYD . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 82606 83172 . - 0 GCA_005502385.1_01330 GCA_005502385.1_01330_gene,GCA_005502385.1_01330_mRNA GCA_005502385.1_01330 Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKRIAVYCGASKGNNPIYVKEAYQLGKYMAEQGYELIFGAGSVGIMGAIQDGVLDYGGRAIGVMPKMLDEREITSQKVSELILVDSMHERKEKMTELADAFVMAPGGAGSLEEFFEMYSWAQIGIHQKPIGIFNLNGFFNPLQILIDHMIEEGFIDKKYKELAPLYDTKEALIDGLLNYKPLGVRTYD persistent 188 Cytokinin riboside 5'-monophosphate phosphoribohydrolase 3.2.2.- WP_017175980.1 UPI0002D8E4B2 UniRef100_A0A3S7GU70,UniRef50_A0A9X5XNB6,UniRef90_A0A380G339 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 83169 83630 . - . GCA_005502385.1_01331_gene GCA_005502385.1_01331 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTTIFVDGDACPVVNEIIDLTAETGFFVTILRSFSHISHSHYPSHVNILYVDDGPDAVDYKIIQLVTTSDIVITQDYGLASLLLKKARIIMHHKGFIYNENNIDILLQQRYNNAQIRKQGGRHKGPSPFSKADRQHFCDVFQTLLNQLMEDTK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 83169 83630 . - . GCA_005502385.1_01331_mRNA GCA_005502385.1_01331 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTTIFVDGDACPVVNEIIDLTAETGFFVTILRSFSHISHSHYPSHVNILYVDDGPDAVDYKIIQLVTTSDIVITQDYGLASLLLKKARIIMHHKGFIYNENNIDILLQQRYNNAQIRKQGGRHKGPSPFSKADRQHFCDVFQTLLNQLMEDTK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 83169 83630 . - 0 GCA_005502385.1_01331 GCA_005502385.1_01331_gene,GCA_005502385.1_01331_mRNA GCA_005502385.1_01331 hypothetical protein UPF0178 protein YaiI GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTTIFVDGDACPVVNEIIDLTAETGFFVTILRSFSHISHSHYPSHVNILYVDDGPDAVDYKIIQLVTTSDIVITQDYGLASLLLKKARIIMHHKGFIYNENNIDILLQQRYNNAQIRKQGGRHKGPSPFSKADRQHFCDVFQTLLNQLMEDTK persistent 153 YaiI/YqxD family protein WP_049382107.1 UPI00066C3FFF UniRef100_UPI00066C3FFF,UniRef50_Q2G0B6,UniRef90_A0A4Q9WQK7 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 83630 84106 . - . GCA_005502385.1_01332_gene GCA_005502385.1_01332 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDKKQVIKTVINVLPIFIVPLVVERKKIKSHPDVQKASHATSHATHTVANKASDVKDYFGDKKQEFDNKRELKKIAKENDPKYIKKKGSKLAKKNHKQSSKLEKKLQKNIDKRHKEEEKIQKHNEKQRIKEMKKYDNYNADSIITQDKVLHSEKATNK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 83630 84106 . - . GCA_005502385.1_01332_mRNA GCA_005502385.1_01332 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDKKQVIKTVINVLPIFIVPLVVERKKIKSHPDVQKASHATSHATHTVANKASDVKDYFGDKKQEFDNKRELKKIAKENDPKYIKKKGSKLAKKNHKQSSKLEKKLQKNIDKRHKEEEKIQKHNEKQRIKEMKKYDNYNADSIITQDKVLHSEKATNK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 83630 84106 . - 0 GCA_005502385.1_01332 GCA_005502385.1_01332_gene,GCA_005502385.1_01332_mRNA GCA_005502385.1_01332 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDKKQVIKTVINVLPIFIVPLVVERKKIKSHPDVQKASHATSHATHTVANKASDVKDYFGDKKQEFDNKRELKKIAKENDPKYIKKKGSKLAKKNHKQSSKLEKKLQKNIDKRHKEEEKIQKHNEKQRIKEMKKYDNYNADSIITQDKVLHSEKATNK persistent 158 CHAP domain-containing protein UniRef50_A0A6N0I3B6,UniRef90_A0A6N0I3B6 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 84248 85117 . - . GCA_005502385.1_01333_gene GCA_005502385.1_01333 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIIIEFIKALILGIVEGLTEFAPVSSTGHMILVDDMWLKSSQFLGSHSAFTFKIVIQLGSVFAAAWVFRERYFEMLHIGKYKHVAHSEGMRSKPRRLNLLHVLIGMIPAGILGVLFDDFIEAHLFSVPTVMIGLFIGAIYMIIADKYSTKVKHPQTVDQINYLQAFVIGISQAVAMWPGFSRSGSTISTGVLMKLNHKSASDFTFIMAVPIMLAASALSLLKNYQYIDLAHVPFYIIGFLAAFIVGLIAIKTFLHLINKVKLVPFAIYRIVLVIFIAILYFGFGIGKGI . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 84248 85117 . - . GCA_005502385.1_01333_mRNA GCA_005502385.1_01333 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIIIEFIKALILGIVEGLTEFAPVSSTGHMILVDDMWLKSSQFLGSHSAFTFKIVIQLGSVFAAAWVFRERYFEMLHIGKYKHVAHSEGMRSKPRRLNLLHVLIGMIPAGILGVLFDDFIEAHLFSVPTVMIGLFIGAIYMIIADKYSTKVKHPQTVDQINYLQAFVIGISQAVAMWPGFSRSGSTISTGVLMKLNHKSASDFTFIMAVPIMLAASALSLLKNYQYIDLAHVPFYIIGFLAAFIVGLIAIKTFLHLINKVKLVPFAIYRIVLVIFIAILYFGFGIGKGI . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 84248 85117 . - 0 GCA_005502385.1_01333 GCA_005502385.1_01333_gene,GCA_005502385.1_01333_mRNA GCA_005502385.1_01333 Undecaprenyl-diphosphatase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIIIEFIKALILGIVEGLTEFAPVSSTGHMILVDDMWLKSSQFLGSHSAFTFKIVIQLGSVFAAAWVFRERYFEMLHIGKYKHVAHSEGMRSKPRRLNLLHVLIGMIPAGILGVLFDDFIEAHLFSVPTVMIGLFIGAIYMIIADKYSTKVKHPQTVDQINYLQAFVIGISQAVAMWPGFSRSGSTISTGVLMKLNHKSASDFTFIMAVPIMLAASALSLLKNYQYIDLAHVPFYIIGFLAAFIVGLIAIKTFLHLINKVKLVPFAIYRIVLVIFIAILYFGFGIGKGI persistent 289 uppP undecaprenyl-diphosphate phosphatase 3.6.1.27 GO:0005886,GO:0008360,GO:0009252,GO:0016020,GO:0016311,GO:0046677,GO:0050380,GO:0071555 COG1968,I WP_019834913.1 UPI00037FD76D UniRef100_UPI00037FD76D,UniRef50_P94507,UniRef90_Q4L4A6 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 85404 87047 . + . GCA_005502385.1_01334_gene GCA_005502385.1_01334 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKNLMSLVFKYKLFPIFMGMTSVLLAICVVIQNIGIAEFLNQVLYHKLSSIYSLLFTILIVLILRVTFNMLNQRLGDILAYKVKHDLRQKIITSKSKASIGVQTNILTEVIDGITPFFNNYLPQVFKSMFIPLVIISVMCFIHLNTAIIMAVTAPFIPLFYIIFGLKTRDESKEQMMYLNQFSQRFLNIAKGLITLRLFRRTTETENRIYRESTHFRDLTMKILKSAFLSGLMLEFISMLGIGLIALEATLSLVVFHHINFKIAVIAIILAPEFYNAIKDLGQAFHTGKQSEGASDIIFDFLNNIEESNINTPTINQNQQNQIYFDKVSYQYPNTTLYALKDITFSINQGENIAIVGPSGAGKSTLANLIKQMITPTKGRIIFNSEVTDIGMLNQHPYIFSASVKDNITMFNEVSDEKILQTLETVGLKEKILSLNKGIHTVIGEGGEMLSGGQMRRIELCRVLLLRPSILIFDEPTTGLDIETERIVQQTLEHNFKHATTITIAHRNSTIRRATRRLYVKEGHLIKDDNQISTQLNKVVNKDETTY . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 85404 87047 . + . GCA_005502385.1_01334_mRNA GCA_005502385.1_01334 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKNLMSLVFKYKLFPIFMGMTSVLLAICVVIQNIGIAEFLNQVLYHKLSSIYSLLFTILIVLILRVTFNMLNQRLGDILAYKVKHDLRQKIITSKSKASIGVQTNILTEVIDGITPFFNNYLPQVFKSMFIPLVIISVMCFIHLNTAIIMAVTAPFIPLFYIIFGLKTRDESKEQMMYLNQFSQRFLNIAKGLITLRLFRRTTETENRIYRESTHFRDLTMKILKSAFLSGLMLEFISMLGIGLIALEATLSLVVFHHINFKIAVIAIILAPEFYNAIKDLGQAFHTGKQSEGASDIIFDFLNNIEESNINTPTINQNQQNQIYFDKVSYQYPNTTLYALKDITFSINQGENIAIVGPSGAGKSTLANLIKQMITPTKGRIIFNSEVTDIGMLNQHPYIFSASVKDNITMFNEVSDEKILQTLETVGLKEKILSLNKGIHTVIGEGGEMLSGGQMRRIELCRVLLLRPSILIFDEPTTGLDIETERIVQQTLEHNFKHATTITIAHRNSTIRRATRRLYVKEGHLIKDDNQISTQLNKVVNKDETTY . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 85404 87047 . + 0 GCA_005502385.1_01334 GCA_005502385.1_01334_gene,GCA_005502385.1_01334_mRNA GCA_005502385.1_01334 ATP-binding/permease protein CydD GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKNLMSLVFKYKLFPIFMGMTSVLLAICVVIQNIGIAEFLNQVLYHKLSSIYSLLFTILIVLILRVTFNMLNQRLGDILAYKVKHDLRQKIITSKSKASIGVQTNILTEVIDGITPFFNNYLPQVFKSMFIPLVIISVMCFIHLNTAIIMAVTAPFIPLFYIIFGLKTRDESKEQMMYLNQFSQRFLNIAKGLITLRLFRRTTETENRIYRESTHFRDLTMKILKSAFLSGLMLEFISMLGIGLIALEATLSLVVFHHINFKIAVIAIILAPEFYNAIKDLGQAFHTGKQSEGASDIIFDFLNNIEESNINTPTINQNQQNQIYFDKVSYQYPNTTLYALKDITFSINQGENIAIVGPSGAGKSTLANLIKQMITPTKGRIIFNSEVTDIGMLNQHPYIFSASVKDNITMFNEVSDEKILQTLETVGLKEKILSLNKGIHTVIGEGGEMLSGGQMRRIELCRVLLLRPSILIFDEPTTGLDIETERIVQQTLEHNFKHATTITIAHRNSTIRRATRRLYVKEGHLIKDDNQISTQLNKVVNKDETTY persistent 547 ABC transporter ATP-binding protein/permease WP_019834914.1 UPI000368C6F4 UniRef100_UPI000368C6F4,UniRef50_A0A0H2VEV6,UniRef90_A0A3S7GU71 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 87031 88698 . + . GCA_005502385.1_01335_gene GCA_005502385.1_01335 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKPHIKFHLDKDLFLAILVSITGSLIALTMFFLSGYMVTQSALGMPIYALMILVVSVKLFGFLRAITRYVERLLSHRTTFTMLRNIRVQFVKQLFPRVPNIYRKFRSSDLISRMVNKVESLQNIYLRVYYPPFVIGLTALIAAVALIYFSIAHAILIVISMLFYLWIIPWLSAKRVRILKQQVTTHEQKMLAEFYDYKAGYQELITFNQQDAYKKKVVKSLEYYDRLQAKENRFLTFYDYILNLISIVTIFLSLALAVIQIEHGYLDVIYVTSMILMILTLFEQAIPMSNFAYYKADTDQALTDINEVFNSSITTPKLNVQTKQEPVFSISNLNFKYFNQETLVLNDINLTIHKGEKVAIIGPSGSGKSTLMQLLCGLYETEEGSVELYGQPITQINENDRYNEINALLQSQQIFDGTVRENLLSNQKDENLIDVLNMLNLSYLNLNTQLTLDGTSLSGGEIQRLSLARLFLKSSNIWLLDEPTTALDEDNTNNVMKEINKRAETLVVATHDLDLLPYFDTIIVMVEGEVVEYGDYVSLSQNKGYLNRMIHINTL . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 87031 88698 . + . GCA_005502385.1_01335_mRNA GCA_005502385.1_01335 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKPHIKFHLDKDLFLAILVSITGSLIALTMFFLSGYMVTQSALGMPIYALMILVVSVKLFGFLRAITRYVERLLSHRTTFTMLRNIRVQFVKQLFPRVPNIYRKFRSSDLISRMVNKVESLQNIYLRVYYPPFVIGLTALIAAVALIYFSIAHAILIVISMLFYLWIIPWLSAKRVRILKQQVTTHEQKMLAEFYDYKAGYQELITFNQQDAYKKKVVKSLEYYDRLQAKENRFLTFYDYILNLISIVTIFLSLALAVIQIEHGYLDVIYVTSMILMILTLFEQAIPMSNFAYYKADTDQALTDINEVFNSSITTPKLNVQTKQEPVFSISNLNFKYFNQETLVLNDINLTIHKGEKVAIIGPSGSGKSTLMQLLCGLYETEEGSVELYGQPITQINENDRYNEINALLQSQQIFDGTVRENLLSNQKDENLIDVLNMLNLSYLNLNTQLTLDGTSLSGGEIQRLSLARLFLKSSNIWLLDEPTTALDEDNTNNVMKEINKRAETLVVATHDLDLLPYFDTIIVMVEGEVVEYGDYVSLSQNKGYLNRMIHINTL . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 87031 88698 . + 0 GCA_005502385.1_01335 GCA_005502385.1_01335_gene,GCA_005502385.1_01335_mRNA GCA_005502385.1_01335 Putative multidrug export ATP-binding/permease protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKPHIKFHLDKDLFLAILVSITGSLIALTMFFLSGYMVTQSALGMPIYALMILVVSVKLFGFLRAITRYVERLLSHRTTFTMLRNIRVQFVKQLFPRVPNIYRKFRSSDLISRMVNKVESLQNIYLRVYYPPFVIGLTALIAAVALIYFSIAHAILIVISMLFYLWIIPWLSAKRVRILKQQVTTHEQKMLAEFYDYKAGYQELITFNQQDAYKKKVVKSLEYYDRLQAKENRFLTFYDYILNLISIVTIFLSLALAVIQIEHGYLDVIYVTSMILMILTLFEQAIPMSNFAYYKADTDQALTDINEVFNSSITTPKLNVQTKQEPVFSISNLNFKYFNQETLVLNDINLTIHKGEKVAIIGPSGSGKSTLMQLLCGLYETEEGSVELYGQPITQINENDRYNEINALLQSQQIFDGTVRENLLSNQKDENLIDVLNMLNLSYLNLNTQLTLDGTSLSGGEIQRLSLARLFLKSSNIWLLDEPTTALDEDNTNNVMKEINKRAETLVVATHDLDLLPYFDTIIVMVEGEVVEYGDYVSLSQNKGYLNRMIHINTL persistent 555 Amino acid ABC transporter ATP-binding/permease protein WP_049379644.1 UPI00066ACA93 UniRef100_UPI00066ACA93,UniRef50_A0A4U9TIQ0,UniRef90_A0A3S7GTU5 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 88814 89251 . - . GCA_005502385.1_01336_gene GCA_005502385.1_01336 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSEQHNLKEQLCFSLYNAQRQVNRYYSNKVFKKYNLTYPQFLVLSILWEESPVNVKKVVTELALDTGTVSPLLKRMENVDLIKRERSEIDQREVFIHLTEKSENIKPELSDASQKVAIASSLSNNEVHELNRLLGKIITAFTENK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 88814 89251 . - . GCA_005502385.1_01336_mRNA GCA_005502385.1_01336 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSEQHNLKEQLCFSLYNAQRQVNRYYSNKVFKKYNLTYPQFLVLSILWEESPVNVKKVVTELALDTGTVSPLLKRMENVDLIKRERSEIDQREVFIHLTEKSENIKPELSDASQKVAIASSLSNNEVHELNRLLGKIITAFTENK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 88814 89251 . - 0 GCA_005502385.1_01336 GCA_005502385.1_01336_gene,GCA_005502385.1_01336_mRNA GCA_005502385.1_01336 HTH-type transcriptional regulator MgrA GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSEQHNLKEQLCFSLYNAQRQVNRYYSNKVFKKYNLTYPQFLVLSILWEESPVNVKKVVTELALDTGTVSPLLKRMENVDLIKRERSEIDQREVFIHLTEKSENIKPELSDASQKVAIASSLSNNEVHELNRLLGKIITAFTENK persistent 145 mgrA HTH-type transcriptional regulator MgrA WP_048682595.1 UPI00065FCA90 UniRef100_UPI00065FCA90,UniRef50_Q2G0B1,UniRef90_A0A2A1KCQ0 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 89474 90397 . + . GCA_005502385.1_01337_gene GCA_005502385.1_01337 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MINNKNKKISITIINGFLGSGKTTFLNNYIHQLLKKDKKITIIMNEFGSFDVDSLLIEEDITVKSLINGCVCCDLNNDLVLQLQSLIKEGVSQHILIESTGIAHPLEVFAACQDPTIVNDVEIPKIIGLVDALRFNNRMKYTAETNELMEEQIKYSDVIILNKMDLVTQVELENIKKQLASINNKATIYVTTYSKLDDVVVKNKSTDINRHVHVHHHNVQSMKYTFSAPIDRQLFYQFIMRLPDEVFRLKGFVKFKDQLDAIYEFQFSMGLPTYGITDREVPLTIVIIGEMLDTTRLKNQLEMIQFT . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 89474 90397 . + . GCA_005502385.1_01337_mRNA GCA_005502385.1_01337 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MINNKNKKISITIINGFLGSGKTTFLNNYIHQLLKKDKKITIIMNEFGSFDVDSLLIEEDITVKSLINGCVCCDLNNDLVLQLQSLIKEGVSQHILIESTGIAHPLEVFAACQDPTIVNDVEIPKIIGLVDALRFNNRMKYTAETNELMEEQIKYSDVIILNKMDLVTQVELENIKKQLASINNKATIYVTTYSKLDDVVVKNKSTDINRHVHVHHHNVQSMKYTFSAPIDRQLFYQFIMRLPDEVFRLKGFVKFKDQLDAIYEFQFSMGLPTYGITDREVPLTIVIIGEMLDTTRLKNQLEMIQFT . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 89474 90397 . + 0 GCA_005502385.1_01337 GCA_005502385.1_01337_gene,GCA_005502385.1_01337_mRNA GCA_005502385.1_01337 Putative metal chaperone YciC GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MINNKNKKISITIINGFLGSGKTTFLNNYIHQLLKKDKKITIIMNEFGSFDVDSLLIEEDITVKSLINGCVCCDLNNDLVLQLQSLIKEGVSQHILIESTGIAHPLEVFAACQDPTIVNDVEIPKIIGLVDALRFNNRMKYTAETNELMEEQIKYSDVIILNKMDLVTQVELENIKKQLASINNKATIYVTTYSKLDDVVVKNKSTDINRHVHVHHHNVQSMKYTFSAPIDRQLFYQFIMRLPDEVFRLKGFVKFKDQLDAIYEFQFSMGLPTYGITDREVPLTIVIIGEMLDTTRLKNQLEMIQFT persistent 307 cobW Cobalamin biosynthesis protein CobW WP_019834916.1 UPI00036435A0 UniRef100_UPI00036435A0,UniRef50_G5JL55,UniRef90_A0A3S7GTU9 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 90520 90819 . + . GCA_005502385.1_01338_gene GCA_005502385.1_01338 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNHNEDKRTKQIRFEFKWITIPYLIFAIIILLLNIFFTNIKITMTLFGLFFAYNLGILFIAFINKYKRTLILTLILTILSAATFFTLLYVFGLNREIFG . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 90520 90819 . + . GCA_005502385.1_01338_mRNA GCA_005502385.1_01338 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNHNEDKRTKQIRFEFKWITIPYLIFAIIILLLNIFFTNIKITMTLFGLFFAYNLGILFIAFINKYKRTLILTLILTILSAATFFTLLYVFGLNREIFG . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 90520 90819 . + 0 GCA_005502385.1_01338 GCA_005502385.1_01338_gene,GCA_005502385.1_01338_mRNA GCA_005502385.1_01338 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNHNEDKRTKQIRFEFKWITIPYLIFAIIILLLNIFFTNIKITMTLFGLFFAYNLGILFIAFINKYKRTLILTLILTILSAATFFTLLYVFGLNREIFG persistent 99 hypothetical protein UniRef50_Q2G0A8,UniRef90_A0A657ZR91 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 90961 92334 . + . GCA_005502385.1_01339_gene GCA_005502385.1_01339 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNIGVILNRVFRINNNPLFEYINQQKDDIDKCYLIIPKETFEEEGTDKKANYYYGTLEKFLYQLKEHHIEPYVINYSELGMFCTEHDIKEIVMAGDIMSYHQERYDIRHLKQAFKKHDISVITINVNHYFKPSNTMNQQGQPYKVFTSFYKAHRSKLRQHSSYQYHLSDIANKCSQSQQTITNDYHHDGQSEDQALNNWQDYLNHSIQNYKKDREYLPEVLTSQLSIALAYGLIDIKQIITDLLERYEENENNYESFIREVMFREFYYVLMAQYPHSAHEAFNEKYRTIQWSYNKEEFNRWCEGKTGFPIIDAAMNELNETGFMHNRMRMVVSQFLTKDLFIDWAWGEDYFRKKLIDYDAASNVHGWQWSASTGTDAVPYFRMFNPTRQSERFDKDALYIKKYIPIFDNVPAKFLHHPFQHQTQLVKKGIQLGEDYPKPIVDHKVAREYVMTIFKNI . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 90961 92334 . + . GCA_005502385.1_01339_mRNA GCA_005502385.1_01339 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNIGVILNRVFRINNNPLFEYINQQKDDIDKCYLIIPKETFEEEGTDKKANYYYGTLEKFLYQLKEHHIEPYVINYSELGMFCTEHDIKEIVMAGDIMSYHQERYDIRHLKQAFKKHDISVITINVNHYFKPSNTMNQQGQPYKVFTSFYKAHRSKLRQHSSYQYHLSDIANKCSQSQQTITNDYHHDGQSEDQALNNWQDYLNHSIQNYKKDREYLPEVLTSQLSIALAYGLIDIKQIITDLLERYEENENNYESFIREVMFREFYYVLMAQYPHSAHEAFNEKYRTIQWSYNKEEFNRWCEGKTGFPIIDAAMNELNETGFMHNRMRMVVSQFLTKDLFIDWAWGEDYFRKKLIDYDAASNVHGWQWSASTGTDAVPYFRMFNPTRQSERFDKDALYIKKYIPIFDNVPAKFLHHPFQHQTQLVKKGIQLGEDYPKPIVDHKVAREYVMTIFKNI . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 90961 92334 . + 0 GCA_005502385.1_01339 GCA_005502385.1_01339_gene,GCA_005502385.1_01339_mRNA GCA_005502385.1_01339 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNIGVILNRVFRINNNPLFEYINQQKDDIDKCYLIIPKETFEEEGTDKKANYYYGTLEKFLYQLKEHHIEPYVINYSELGMFCTEHDIKEIVMAGDIMSYHQERYDIRHLKQAFKKHDISVITINVNHYFKPSNTMNQQGQPYKVFTSFYKAHRSKLRQHSSYQYHLSDIANKCSQSQQTITNDYHHDGQSEDQALNNWQDYLNHSIQNYKKDREYLPEVLTSQLSIALAYGLIDIKQIITDLLERYEENENNYESFIREVMFREFYYVLMAQYPHSAHEAFNEKYRTIQWSYNKEEFNRWCEGKTGFPIIDAAMNELNETGFMHNRMRMVVSQFLTKDLFIDWAWGEDYFRKKLIDYDAASNVHGWQWSASTGTDAVPYFRMFNPTRQSERFDKDALYIKKYIPIFDNVPAKFLHHPFQHQTQLVKKGIQLGEDYPKPIVDHKVAREYVMTIFKNI persistent 457 DNA photolyase family protein WP_019834918.1 UPI00035D3AFD UniRef100_UPI00035D3AFD,UniRef50_A0A0E7MV68,UniRef90_A0A3S7GYD9 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 92464 93081 . - . GCA_005502385.1_01340_gene GCA_005502385.1_01340 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTSRYIARIYFIILFVISLFETRVFNFVSLNLFLAYIPLELCFLLDLFKPRKKFEWPIFIIFALIFILLVPNTFYMVTDLIHLNQFTFDFYVQLNLTEWLYFTFLLLSVFFAIYCMALIFVHLSHFTSKLWLNRCLLITLMFLNGLGIFMGRFLRFHTVHLITRPFTIITEVIRALNGSSLIFISLMMLLQFVILLFIKGIRMAH . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 92464 93081 . - . GCA_005502385.1_01340_mRNA GCA_005502385.1_01340 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTSRYIARIYFIILFVISLFETRVFNFVSLNLFLAYIPLELCFLLDLFKPRKKFEWPIFIIFALIFILLVPNTFYMVTDLIHLNQFTFDFYVQLNLTEWLYFTFLLLSVFFAIYCMALIFVHLSHFTSKLWLNRCLLITLMFLNGLGIFMGRFLRFHTVHLITRPFTIITEVIRALNGSSLIFISLMMLLQFVILLFIKGIRMAH . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 92464 93081 . - 0 GCA_005502385.1_01340 GCA_005502385.1_01340_gene,GCA_005502385.1_01340_mRNA GCA_005502385.1_01340 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTSRYIARIYFIILFVISLFETRVFNFVSLNLFLAYIPLELCFLLDLFKPRKKFEWPIFIIFALIFILLVPNTFYMVTDLIHLNQFTFDFYVQLNLTEWLYFTFLLLSVFFAIYCMALIFVHLSHFTSKLWLNRCLLITLMFLNGLGIFMGRFLRFHTVHLITRPFTIITEVIRALNGSSLIFISLMMLLQFVILLFIKGIRMAH persistent 205 DUF1361 domain-containing protein WP_019834919.1 UPI0003805EAF UniRef100_UPI0003805EAF,UniRef50_Q2G0A4,UniRef90_A0AAE5MZ10 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 93467 94630 . + . GCA_005502385.1_01341_gene GCA_005502385.1_01341 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKQLFTLYFNIFLIFVGIGLVIPVLPVYLKDLGLKGSDLGILVAIFSLSQMIISPFGGSLADKLGKKLIICLGLVFFTISEFLFAMSHSFILLIVSRILGGFSAGMVMPGVTGMIADISKAKDKAKNFGYMSAIINSGFILGPGIGGFLAEVSHRLPFYFAGALGVMAFVISVILIRQPQNTVESHHIHFETKELSKIQWGVFITPIILTFVLAFGLSSFETLFSLYTSAKANYAPGDISIAIVGGGVAGAVFQIFFFDKFMRYITELTFITWALLYSVIVIFSLIIAHSYWSIMLISFIVFIGFDLIRPALTNYYSNIAGNRQGFAGGLNSTFTSMGNFVGPLVAGSLFDVNIEFPLYMSIIVMLFGIVIIFIEKNLKLNRSGCD . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 93467 94630 . + . GCA_005502385.1_01341_mRNA GCA_005502385.1_01341 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKQLFTLYFNIFLIFVGIGLVIPVLPVYLKDLGLKGSDLGILVAIFSLSQMIISPFGGSLADKLGKKLIICLGLVFFTISEFLFAMSHSFILLIVSRILGGFSAGMVMPGVTGMIADISKAKDKAKNFGYMSAIINSGFILGPGIGGFLAEVSHRLPFYFAGALGVMAFVISVILIRQPQNTVESHHIHFETKELSKIQWGVFITPIILTFVLAFGLSSFETLFSLYTSAKANYAPGDISIAIVGGGVAGAVFQIFFFDKFMRYITELTFITWALLYSVIVIFSLIIAHSYWSIMLISFIVFIGFDLIRPALTNYYSNIAGNRQGFAGGLNSTFTSMGNFVGPLVAGSLFDVNIEFPLYMSIIVMLFGIVIIFIEKNLKLNRSGCD . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 93467 94630 . + 0 GCA_005502385.1_01341 GCA_005502385.1_01341_gene,GCA_005502385.1_01341_mRNA GCA_005502385.1_01341 Tetracycline resistance protein%2C class B GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKQLFTLYFNIFLIFVGIGLVIPVLPVYLKDLGLKGSDLGILVAIFSLSQMIISPFGGSLADKLGKKLIICLGLVFFTISEFLFAMSHSFILLIVSRILGGFSAGMVMPGVTGMIADISKAKDKAKNFGYMSAIINSGFILGPGIGGFLAEVSHRLPFYFAGALGVMAFVISVILIRQPQNTVESHHIHFETKELSKIQWGVFITPIILTFVLAFGLSSFETLFSLYTSAKANYAPGDISIAIVGGGVAGAVFQIFFFDKFMRYITELTFITWALLYSVIVIFSLIIAHSYWSIMLISFIVFIGFDLIRPALTNYYSNIAGNRQGFAGGLNSTFTSMGNFVGPLVAGSLFDVNIEFPLYMSIIVMLFGIVIIFIEKNLKLNRSGCD persistent 387 Multidrug MFS transporter WP_019834920.1 UPI0003658B4B UniRef100_UPI0003658B4B,UniRef50_P0A0J4,UniRef90_A0A3S7GU65 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 94798 95283 . + . GCA_005502385.1_01342_gene GCA_005502385.1_01342 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNLKNILLSVVAIILSICLAFLLFIATNQNALAKVHRTISTFSKVGSIVETENILNINSNHTAEASEKDQTQRKADIRQNQNVNYRLNEKAQEKYLYSTEECKTIAENYMQQNYKEPVKLERLNETNQSITFEAYPKNKKAEDITINKMGKVEIISVNDVK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 94798 95283 . + . GCA_005502385.1_01342_mRNA GCA_005502385.1_01342 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNLKNILLSVVAIILSICLAFLLFIATNQNALAKVHRTISTFSKVGSIVETENILNINSNHTAEASEKDQTQRKADIRQNQNVNYRLNEKAQEKYLYSTEECKTIAENYMQQNYKEPVKLERLNETNQSITFEAYPKNKKAEDITINKMGKVEIISVNDVK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 94798 95283 . + 0 GCA_005502385.1_01342 GCA_005502385.1_01342_gene,GCA_005502385.1_01342_mRNA GCA_005502385.1_01342 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNLKNILLSVVAIILSICLAFLLFIATNQNALAKVHRTISTFSKVGSIVETENILNINSNHTAEASEKDQTQRKADIRQNQNVNYRLNEKAQEKYLYSTEECKTIAENYMQQNYKEPVKLERLNETNQSITFEAYPKNKKAEDITINKMGKVEIISVNDVK persistent 161 Peptidase WP_025987153.1 UPI000473F2C8 UniRef100_UPI0003A67615,UniRef50_A0A2K0A9L9,UniRef90_A0A3S7GU82 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 95405 95884 . + . GCA_005502385.1_01343_gene GCA_005502385.1_01343 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKHKKTNAMRMLDRAKINYSVNTFEIGEEHLDGETIAELVHANVKDVYKTLVLENANYDHFVCVIPVSETLDLKEAAHVIGEKKLNLMPMDDLKKVTGYIRGGCSPIGMKHSFPTIIDESALSRDKINVSGGQRGMQIILEPNDLIAVTQAQTARITQH . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 95405 95884 . + . GCA_005502385.1_01343_mRNA GCA_005502385.1_01343 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKHKKTNAMRMLDRAKINYSVNTFEIGEEHLDGETIAELVHANVKDVYKTLVLENANYDHFVCVIPVSETLDLKEAAHVIGEKKLNLMPMDDLKKVTGYIRGGCSPIGMKHSFPTIIDESALSRDKINVSGGQRGMQIILEPNDLIAVTQAQTARITQH . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 95405 95884 . + 0 GCA_005502385.1_01343 GCA_005502385.1_01343_gene,GCA_005502385.1_01343_mRNA GCA_005502385.1_01343 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKHKKTNAMRMLDRAKINYSVNTFEIGEEHLDGETIAELVHANVKDVYKTLVLENANYDHFVCVIPVSETLDLKEAAHVIGEKKLNLMPMDDLKKVTGYIRGGCSPIGMKHSFPTIIDESALSRDKINVSGGQRGMQIILEPNDLIAVTQAQTARITQH persistent 159 ybaK Cys-tRNA(Pro) deacylase 3.1.1.- GO:0002161,GO:0043039 UniRef50_A0A2T4MLR5,UniRef90_A0A4Q9WZ67 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 96032 96778 . + . GCA_005502385.1_01344_gene GCA_005502385.1_01344 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MISEKRQSLILQELKKKDFLSLQELIERTGCSASTIRRDLSKLQQLGRLQRVHGGATLNSHRNQEPILSEKLSTNLKEKKEIGRKAALLIEDNDCIFMDAGSSTIEMIPFIKAQDIVVVTNGLSHVERLLQRGIKTLMIGGEVKATTFATVGASALEVLRRYCFDKAFIGMNGLDLNHGLTTPDEKEALIKERAIHQATTSYVLLDHSKLDEIYFAHVSTKSCHVEYIVSEQLRHHNRYNEYKEKYHF . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 96032 96778 . + . GCA_005502385.1_01344_mRNA GCA_005502385.1_01344 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MISEKRQSLILQELKKKDFLSLQELIERTGCSASTIRRDLSKLQQLGRLQRVHGGATLNSHRNQEPILSEKLSTNLKEKKEIGRKAALLIEDNDCIFMDAGSSTIEMIPFIKAQDIVVVTNGLSHVERLLQRGIKTLMIGGEVKATTFATVGASALEVLRRYCFDKAFIGMNGLDLNHGLTTPDEKEALIKERAIHQATTSYVLLDHSKLDEIYFAHVSTKSCHVEYIVSEQLRHHNRYNEYKEKYHF . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 96032 96778 . + 0 GCA_005502385.1_01344 GCA_005502385.1_01344_gene,GCA_005502385.1_01344_mRNA GCA_005502385.1_01344 putative HTH-type transcriptional regulator YdjF GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MISEKRQSLILQELKKKDFLSLQELIERTGCSASTIRRDLSKLQQLGRLQRVHGGATLNSHRNQEPILSEKLSTNLKEKKEIGRKAALLIEDNDCIFMDAGSSTIEMIPFIKAQDIVVVTNGLSHVERLLQRGIKTLMIGGEVKATTFATVGASALEVLRRYCFDKAFIGMNGLDLNHGLTTPDEKEALIKERAIHQATTSYVLLDHSKLDEIYFAHVSTKSCHVEYIVSEQLRHHNRYNEYKEKYHF persistent 248 deoR DeoR family transcriptional regulator WP_048682600.1 UPI0006603406 UniRef100_UPI0006603406,UniRef50_Q2G240,UniRef90_A0A3S7GU66 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 96789 97709 . + . GCA_005502385.1_01345_gene GCA_005502385.1_01345 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIYTVTFNPSIDYIMFTDGFELKGLNRARETYKFAGGKGINVSRVLKTLDVSSTALGFAGGFPGEFISSILEQSDINTEFIKVNEDTRINVKLKSGDETEINAPGPNVTSDQFEALLNQIRHTSKEDTVIVAGSVPKSIPSDAYAQIAKITQETGAKLVVDAERDLVNTVLEYHPLFIKPNKDELEEMFDVTIKSDQDVVKYGREIVKNGSQSVIISLGGDGAIYVDETRSIKAQNPKGEVVNTVGSGDSTVAGMVAGLESGLSLEEAFRQAVASGTATAFNDDLALKEDIEKIKSQVTISVLDGE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 96789 97709 . + . GCA_005502385.1_01345_mRNA GCA_005502385.1_01345 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIYTVTFNPSIDYIMFTDGFELKGLNRARETYKFAGGKGINVSRVLKTLDVSSTALGFAGGFPGEFISSILEQSDINTEFIKVNEDTRINVKLKSGDETEINAPGPNVTSDQFEALLNQIRHTSKEDTVIVAGSVPKSIPSDAYAQIAKITQETGAKLVVDAERDLVNTVLEYHPLFIKPNKDELEEMFDVTIKSDQDVVKYGREIVKNGSQSVIISLGGDGAIYVDETRSIKAQNPKGEVVNTVGSGDSTVAGMVAGLESGLSLEEAFRQAVASGTATAFNDDLALKEDIEKIKSQVTISVLDGE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 96789 97709 . + 0 GCA_005502385.1_01345 GCA_005502385.1_01345_gene,GCA_005502385.1_01345_mRNA GCA_005502385.1_01345 Tagatose-6-phosphate kinase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIYTVTFNPSIDYIMFTDGFELKGLNRARETYKFAGGKGINVSRVLKTLDVSSTALGFAGGFPGEFISSILEQSDINTEFIKVNEDTRINVKLKSGDETEINAPGPNVTSDQFEALLNQIRHTSKEDTVIVAGSVPKSIPSDAYAQIAKITQETGAKLVVDAERDLVNTVLEYHPLFIKPNKDELEEMFDVTIKSDQDVVKYGREIVKNGSQSVIISLGGDGAIYVDETRSIKAQNPKGEVVNTVGSGDSTVAGMVAGLESGLSLEEAFRQAVASGTATAFNDDLALKEDIEKIKSQVTISVLDGE persistent 306 pfkB 1-phosphofructokinase 2.7.1.56 GO:0008662 WP_019834923.1 UPI000362E978 UniRef100_UPI000362E978,UniRef50_Q9KWK1,UniRef90_A0A8I0WB80 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 97715 99685 . + . GCA_005502385.1_01346_gene GCA_005502385.1_01346 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRITELLTKETIAMDLSASDKNGVIDELVNQLDSAGKLSDIAQFKEAIHNRESQSTTGIGEGIAIPHAKVAAVTSPAIAFGKSKEGVDYQSLDGQPAHLFFMIAAPEGGAQTHLDALAKLSGILMDDKVRENLLQANSEEEILRIIDNADDEATKEEEKEAQEQEAEAQATTGASANDNANESYVLAVTACPTGIAHTYMARDALKKQAEKMGVKIKVETNGSSGIKNHLTQQDIERATGIIVAADVHVETDRFDGKNVVEVPVADGIKRPEELINTALDTSRKPFKAHGGQKNTDKDSNDEKLSPGKAFYKHLMNGVSNMLPLVIAGGILMAIVFLFGANSFDPKSPEHNAFAEQLWNIGNKSAFALIIPILAGFISRSIADKPGFAAGLVGGMLAISGGSGFIGGIIAGFLAGYLTQGIKYITRNLPQAVEGLKPTLIYPLLSVTITGLLMIYVFNPPAAWLNNLLLNGLNSLSGSNIMLLGLVIGAMMAIDMGGPFNKAAYVFATAALTEGNAAPITAAMVGGMIPPLAIATAMFIFKRKFTKEQRGSIVPNYVMGLSFITEGAIPFAAADPLRVIPSMMVGSGVAGAIALGLGSRINAPHGGIIVIAATDFSHIIQTIIALIIGTLVSAVLYGLLKPKLTEQEIKASESMDE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 97715 99685 . + . GCA_005502385.1_01346_mRNA GCA_005502385.1_01346 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRITELLTKETIAMDLSASDKNGVIDELVNQLDSAGKLSDIAQFKEAIHNRESQSTTGIGEGIAIPHAKVAAVTSPAIAFGKSKEGVDYQSLDGQPAHLFFMIAAPEGGAQTHLDALAKLSGILMDDKVRENLLQANSEEEILRIIDNADDEATKEEEKEAQEQEAEAQATTGASANDNANESYVLAVTACPTGIAHTYMARDALKKQAEKMGVKIKVETNGSSGIKNHLTQQDIERATGIIVAADVHVETDRFDGKNVVEVPVADGIKRPEELINTALDTSRKPFKAHGGQKNTDKDSNDEKLSPGKAFYKHLMNGVSNMLPLVIAGGILMAIVFLFGANSFDPKSPEHNAFAEQLWNIGNKSAFALIIPILAGFISRSIADKPGFAAGLVGGMLAISGGSGFIGGIIAGFLAGYLTQGIKYITRNLPQAVEGLKPTLIYPLLSVTITGLLMIYVFNPPAAWLNNLLLNGLNSLSGSNIMLLGLVIGAMMAIDMGGPFNKAAYVFATAALTEGNAAPITAAMVGGMIPPLAIATAMFIFKRKFTKEQRGSIVPNYVMGLSFITEGAIPFAAADPLRVIPSMMVGSGVAGAIALGLGSRINAPHGGIIVIAATDFSHIIQTIIALIIGTLVSAVLYGLLKPKLTEQEIKASESMDE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 97715 99685 . + 0 GCA_005502385.1_01346 GCA_005502385.1_01346_gene,GCA_005502385.1_01346_mRNA GCA_005502385.1_01346 PTS system fructose-specific EIIABC component GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRITELLTKETIAMDLSASDKNGVIDELVNQLDSAGKLSDIAQFKEAIHNRESQSTTGIGEGIAIPHAKVAAVTSPAIAFGKSKEGVDYQSLDGQPAHLFFMIAAPEGGAQTHLDALAKLSGILMDDKVRENLLQANSEEEILRIIDNADDEATKEEEKEAQEQEAEAQATTGASANDNANESYVLAVTACPTGIAHTYMARDALKKQAEKMGVKIKVETNGSSGIKNHLTQQDIERATGIIVAADVHVETDRFDGKNVVEVPVADGIKRPEELINTALDTSRKPFKAHGGQKNTDKDSNDEKLSPGKAFYKHLMNGVSNMLPLVIAGGILMAIVFLFGANSFDPKSPEHNAFAEQLWNIGNKSAFALIIPILAGFISRSIADKPGFAAGLVGGMLAISGGSGFIGGIIAGFLAGYLTQGIKYITRNLPQAVEGLKPTLIYPLLSVTITGLLMIYVFNPPAAWLNNLLLNGLNSLSGSNIMLLGLVIGAMMAIDMGGPFNKAAYVFATAALTEGNAAPITAAMVGGMIPPLAIATAMFIFKRKFTKEQRGSIVPNYVMGLSFITEGAIPFAAADPLRVIPSMMVGSGVAGAIALGLGSRINAPHGGIIVIAATDFSHIIQTIIALIIGTLVSAVLYGLLKPKLTEQEIKASESMDE persistent 656 ptsN PTS fructose transporter subunit IIC COG1762,GT WP_137689586.1 UPI0010F93E82 UniRef100_UPI0010F93E82,UniRef50_B9DK53,UniRef90_A0A3S7GXN0 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 100577 101947 . + . GCA_005502385.1_01347_gene GCA_005502385.1_01347 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 METVTIINLVIFFLLIALTTVFVGSEFALVKVRSTRIEQLADEGNGSAKIVKKMIANLDYYLSACQLGITVTSLGLGWLGEPTFEKLLHPLFNLLHLPSAVTTTISFVISFIVVTYLHVVLGELAPKSIAIQHTEKLALTYARPLYYFGNVMKPLIWLMNGSARVIIRMLGVDPDAQADAMSEEEIKIIINNSYNGGEINQTELNYMQNIFSFDERHAKDIMVPRTQMVTLNEPFNVDELLDTIKEHQFTRYPITEDGDKDHIKGFINVKEFLTEYASGRTIKISNYIHELPMISETTRISDALVSMQREHVHISLIIDEYGGTAGILTMEDILEEIVGEIRDEFDDDEINDIVKLEEDIYQINGRVLLDDLHEKFDITFEDSEDIDTIGGWLQAHNTNLQVEDYIDTKYDRWIVSEMDNHQLVWVVLKYQFNETRPVISDEEEEDNHDHKHESDE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 100577 101947 . + . GCA_005502385.1_01347_mRNA GCA_005502385.1_01347 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 METVTIINLVIFFLLIALTTVFVGSEFALVKVRSTRIEQLADEGNGSAKIVKKMIANLDYYLSACQLGITVTSLGLGWLGEPTFEKLLHPLFNLLHLPSAVTTTISFVISFIVVTYLHVVLGELAPKSIAIQHTEKLALTYARPLYYFGNVMKPLIWLMNGSARVIIRMLGVDPDAQADAMSEEEIKIIINNSYNGGEINQTELNYMQNIFSFDERHAKDIMVPRTQMVTLNEPFNVDELLDTIKEHQFTRYPITEDGDKDHIKGFINVKEFLTEYASGRTIKISNYIHELPMISETTRISDALVSMQREHVHISLIIDEYGGTAGILTMEDILEEIVGEIRDEFDDDEINDIVKLEEDIYQINGRVLLDDLHEKFDITFEDSEDIDTIGGWLQAHNTNLQVEDYIDTKYDRWIVSEMDNHQLVWVVLKYQFNETRPVISDEEEEDNHDHKHESDE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 100577 101947 . + 0 GCA_005502385.1_01347 GCA_005502385.1_01347_gene,GCA_005502385.1_01347_mRNA GCA_005502385.1_01347 hypothetical protein UPF0053 protein Rv1842c GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 METVTIINLVIFFLLIALTTVFVGSEFALVKVRSTRIEQLADEGNGSAKIVKKMIANLDYYLSACQLGITVTSLGLGWLGEPTFEKLLHPLFNLLHLPSAVTTTISFVISFIVVTYLHVVLGELAPKSIAIQHTEKLALTYARPLYYFGNVMKPLIWLMNGSARVIIRMLGVDPDAQADAMSEEEIKIIINNSYNGGEINQTELNYMQNIFSFDERHAKDIMVPRTQMVTLNEPFNVDELLDTIKEHQFTRYPITEDGDKDHIKGFINVKEFLTEYASGRTIKISNYIHELPMISETTRISDALVSMQREHVHISLIIDEYGGTAGILTMEDILEEIVGEIRDEFDDDEINDIVKLEEDIYQINGRVLLDDLHEKFDITFEDSEDIDTIGGWLQAHNTNLQVEDYIDTKYDRWIVSEMDNHQLVWVVLKYQFNETRPVISDEEEEDNHDHKHESDE persistent 456 mpfA Hemolysins COG1253,PT WP_002449560.1 UPI00019FCC8A UniRef100_A0A8X8GX47,UniRef50_A0A380G318,UniRef90_A0A380G318 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 102060 102806 . + . GCA_005502385.1_01348_gene GCA_005502385.1_01348 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MINDTQVLNNGYPMPKVGLGVYKMEDDEMETAVQTALEAGYRAFDTAYFYGNEQALGKALNNSDIAREDVFITSKLWNDYQGYDNTLEYFNKSLENLGLDYLDLYLIHWPCEKDGLYIESYKALEKLYNEGKIKAIGVCNFKPHHLETLMKETTIVPQINQIEVHPYFNQQDVQDYCDKHDITVTAWMPLMRNRGLLDDPVITKLAEQYDKTPAQIVLRWHLAHDRIIIPKSKTPSRIRENYDILTLI . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 102060 102806 . + . GCA_005502385.1_01348_mRNA GCA_005502385.1_01348 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MINDTQVLNNGYPMPKVGLGVYKMEDDEMETAVQTALEAGYRAFDTAYFYGNEQALGKALNNSDIAREDVFITSKLWNDYQGYDNTLEYFNKSLENLGLDYLDLYLIHWPCEKDGLYIESYKALEKLYNEGKIKAIGVCNFKPHHLETLMKETTIVPQINQIEVHPYFNQQDVQDYCDKHDITVTAWMPLMRNRGLLDDPVITKLAEQYDKTPAQIVLRWHLAHDRIIIPKSKTPSRIRENYDILTLI . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 102060 102806 . + 0 GCA_005502385.1_01348 GCA_005502385.1_01348_gene,GCA_005502385.1_01348_mRNA GCA_005502385.1_01348 putative oxidoreductase/MSMEI_2347 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MINDTQVLNNGYPMPKVGLGVYKMEDDEMETAVQTALEAGYRAFDTAYFYGNEQALGKALNNSDIAREDVFITSKLWNDYQGYDNTLEYFNKSLENLGLDYLDLYLIHWPCEKDGLYIESYKALEKLYNEGKIKAIGVCNFKPHHLETLMKETTIVPQINQIEVHPYFNQQDVQDYCDKHDITVTAWMPLMRNRGLLDDPVITKLAEQYDKTPAQIVLRWHLAHDRIIIPKSKTPSRIRENYDILTLI persistent 248 Aldo/keto reductase UniRef50_A0A7U7PXK1,UniRef90_A0A4Q9WU93 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 103026 104009 . + . GCA_005502385.1_01349_gene GCA_005502385.1_01349 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKIRVIIPCFNEGKVVKKTYDRLTEILTENSKTRRYYYDLLFIDDGSKDNTIEHIQHLAEYDEHVKYISFSRNFGKEAAMIAGFQHSVNVDAVVMIDGDLQHPPEFIPKMVEMYQQGFDQVVAKRDRSGENVARKTMSKLYYKLINSFVEDIKFSDGVGDFRLLSQRAVKSIVSLNEYNRFSKGLFEWIGYNTKIFTYKNVEREAGESKWTFTKLLNYGIDGLISFNNKPLRAMIYLGMFIFGLSIIYIIYLLIGILMNGINHPGYFTTIAAVLLLGGIQLMSIGVVGEYIGRIYYEVKQRPKYIVEASNLKAPIEKVVAEKEKIYQ . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 103026 104009 . + . GCA_005502385.1_01349_mRNA GCA_005502385.1_01349 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKIRVIIPCFNEGKVVKKTYDRLTEILTENSKTRRYYYDLLFIDDGSKDNTIEHIQHLAEYDEHVKYISFSRNFGKEAAMIAGFQHSVNVDAVVMIDGDLQHPPEFIPKMVEMYQQGFDQVVAKRDRSGENVARKTMSKLYYKLINSFVEDIKFSDGVGDFRLLSQRAVKSIVSLNEYNRFSKGLFEWIGYNTKIFTYKNVEREAGESKWTFTKLLNYGIDGLISFNNKPLRAMIYLGMFIFGLSIIYIIYLLIGILMNGINHPGYFTTIAAVLLLGGIQLMSIGVVGEYIGRIYYEVKQRPKYIVEASNLKAPIEKVVAEKEKIYQ . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 103026 104009 . + 0 GCA_005502385.1_01349 GCA_005502385.1_01349_gene,GCA_005502385.1_01349_mRNA GCA_005502385.1_01349 Putative glycosyltransferase CsbB GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKIRVIIPCFNEGKVVKKTYDRLTEILTENSKTRRYYYDLLFIDDGSKDNTIEHIQHLAEYDEHVKYISFSRNFGKEAAMIAGFQHSVNVDAVVMIDGDLQHPPEFIPKMVEMYQQGFDQVVAKRDRSGENVARKTMSKLYYKLINSFVEDIKFSDGVGDFRLLSQRAVKSIVSLNEYNRFSKGLFEWIGYNTKIFTYKNVEREAGESKWTFTKLLNYGIDGLISFNNKPLRAMIYLGMFIFGLSIIYIIYLLIGILMNGINHPGYFTTIAAVLLLGGIQLMSIGVVGEYIGRIYYEVKQRPKYIVEASNLKAPIEKVVAEKEKIYQ persistent 327 Glycosyltransferase 2.4.-.- WP_017175965.1 UPI00031C1ABF UniRef100_A0A3S7GX07,UniRef50_B9DKD4,UniRef90_A0A3S7GX07 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 104054 104662 . - . GCA_005502385.1_01350_gene GCA_005502385.1_01350 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIIYVFINIAITICVLGFDLYRHHFKQLTFNSVLLSIVINAIINSIVIEKFNFITFASIIFFLSWTILQYYLNRKHIYLMISEYKSLAFIFAIMISCSLFITFESSDQSVYMSIPYLAPAIFIVGLSIDFISTFSKNEMNHLKFLSKLQHPIMIGHTIIIISIILLTLLTSFWYIFIIIYALFDIYLLWQLKHNHIENDLKK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 104054 104662 . - . GCA_005502385.1_01350_mRNA GCA_005502385.1_01350 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIIYVFINIAITICVLGFDLYRHHFKQLTFNSVLLSIVINAIINSIVIEKFNFITFASIIFFLSWTILQYYLNRKHIYLMISEYKSLAFIFAIMISCSLFITFESSDQSVYMSIPYLAPAIFIVGLSIDFISTFSKNEMNHLKFLSKLQHPIMIGHTIIIISIILLTLLTSFWYIFIIIYALFDIYLLWQLKHNHIENDLKK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 104054 104662 . - 0 GCA_005502385.1_01350 GCA_005502385.1_01350_gene,GCA_005502385.1_01350_mRNA GCA_005502385.1_01350 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIIYVFINIAITICVLGFDLYRHHFKQLTFNSVLLSIVINAIINSIVIEKFNFITFASIIFFLSWTILQYYLNRKHIYLMISEYKSLAFIFAIMISCSLFITFESSDQSVYMSIPYLAPAIFIVGLSIDFISTFSKNEMNHLKFLSKLQHPIMIGHTIIIISIILLTLLTSFWYIFIIIYALFDIYLLWQLKHNHIENDLKK persistent 202 Low temperature requirement protein A WP_017175964.1 UPI0002F73F50 UniRef100_A0A4V6MZG8,UniRef50_A0A9X6AIW2,UniRef90_A0AAE5JMI5 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 104771 105487 . - . GCA_005502385.1_01351_gene GCA_005502385.1_01351 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MPSKIPVLEIFGPTIQGEGRVIGRKTMFVRTAGCDYRCSWCDSAFTWDGSAKDDIELLTAQDIYDRLKEIGGNQFDHVTISGGNPALIKGIQDLVDLFEEKNIFTALETQGSKFQPWMRQINDLTISPKPPSSNMVPNLEILDDVIEQCIPSTLNLKVVVFDKEDYQFARMIHHRYPNIPFYLQVGNPYLDDDVEHHTEKLLGRYETLVDTVMNSSDMNHVYVLPQLHTLLWSNKKGV . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 104771 105487 . - . GCA_005502385.1_01351_mRNA GCA_005502385.1_01351 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MPSKIPVLEIFGPTIQGEGRVIGRKTMFVRTAGCDYRCSWCDSAFTWDGSAKDDIELLTAQDIYDRLKEIGGNQFDHVTISGGNPALIKGIQDLVDLFEEKNIFTALETQGSKFQPWMRQINDLTISPKPPSSNMVPNLEILDDVIEQCIPSTLNLKVVVFDKEDYQFARMIHHRYPNIPFYLQVGNPYLDDDVEHHTEKLLGRYETLVDTVMNSSDMNHVYVLPQLHTLLWSNKKGV . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 104771 105487 . - 0 GCA_005502385.1_01351 GCA_005502385.1_01351_gene,GCA_005502385.1_01351_mRNA GCA_005502385.1_01351 7-carboxy-7-deazaguanine synthase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MPSKIPVLEIFGPTIQGEGRVIGRKTMFVRTAGCDYRCSWCDSAFTWDGSAKDDIELLTAQDIYDRLKEIGGNQFDHVTISGGNPALIKGIQDLVDLFEEKNIFTALETQGSKFQPWMRQINDLTISPKPPSSNMVPNLEILDDVIEQCIPSTLNLKVVVFDKEDYQFARMIHHRYPNIPFYLQVGNPYLDDDVEHHTEKLLGRYETLVDTVMNSSDMNHVYVLPQLHTLLWSNKKGV persistent 238 queE 7-carboxy-7-deazaguanine synthase QueE 4.3.99.3 GO:0006400,GO:0051539,GO:1904047 WP_017175963.1 UPI0002E9E1AB UniRef100_A0A8X8KHK3,UniRef50_Q81G67,UniRef90_A0AAE5JM09 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 105487 105906 . - . GCA_005502385.1_01352_gene GCA_005502385.1_01352 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIQQVYPTVNHPYTFELNKDFNFSAAHFIPSEDAGKCMRTHGHTYFVNLTIVGDTLDHNGFLINFSELKRLVHDQFDHYLLNDLPQFKDKSPSTEIVAQTIFEIVQAHLNEYDNKPKCVQVYLRETPSSYVVYRPKENK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 105487 105906 . - . GCA_005502385.1_01352_mRNA GCA_005502385.1_01352 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIQQVYPTVNHPYTFELNKDFNFSAAHFIPSEDAGKCMRTHGHTYFVNLTIVGDTLDHNGFLINFSELKRLVHDQFDHYLLNDLPQFKDKSPSTEIVAQTIFEIVQAHLNEYDNKPKCVQVYLRETPSSYVVYRPKENK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 105487 105906 . - 0 GCA_005502385.1_01352 GCA_005502385.1_01352_gene,GCA_005502385.1_01352_mRNA GCA_005502385.1_01352 6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIQQVYPTVNHPYTFELNKDFNFSAAHFIPSEDAGKCMRTHGHTYFVNLTIVGDTLDHNGFLINFSELKRLVHDQFDHYLLNDLPQFKDKSPSTEIVAQTIFEIVQAHLNEYDNKPKCVQVYLRETPSSYVVYRPKENK persistent 139 queD 6-carboxytetrahydropterin synthase QueD 4.1.2.50,4.2.3.12 GO:0003824,GO:0008616 WP_017175962.1 UPI000313E7A1 UniRef100_A0A1L8Y4R7,UniRef50_O31676,UniRef90_A0A1L8Y4R7 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 105903 106580 . - . GCA_005502385.1_01353_gene GCA_005502385.1_01353 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MPNSVLNSEKAIVVFSGGQDSTTCLFYAKRHFKEVELVTFNYGQRHNTEIEVASKIAKDQGLKHHILDMSLLSQLTPNALTKHDMKIETGEDGIPNTFVPARNLLFLSFAGALAYQVNAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDRDFVIHTPLMWLDKTQTWELSDELGVLDYVRHNTLTCYNGIIGDGCGECPACKLRQRGLHQYLEQKGDASL . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 105903 106580 . - . GCA_005502385.1_01353_mRNA GCA_005502385.1_01353 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MPNSVLNSEKAIVVFSGGQDSTTCLFYAKRHFKEVELVTFNYGQRHNTEIEVASKIAKDQGLKHHILDMSLLSQLTPNALTKHDMKIETGEDGIPNTFVPARNLLFLSFAGALAYQVNAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDRDFVIHTPLMWLDKTQTWELSDELGVLDYVRHNTLTCYNGIIGDGCGECPACKLRQRGLHQYLEQKGDASL . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 105903 106580 . - 0 GCA_005502385.1_01353 GCA_005502385.1_01353_gene,GCA_005502385.1_01353_mRNA GCA_005502385.1_01353 7-cyano-7-deazaguanine synthase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MPNSVLNSEKAIVVFSGGQDSTTCLFYAKRHFKEVELVTFNYGQRHNTEIEVASKIAKDQGLKHHILDMSLLSQLTPNALTKHDMKIETGEDGIPNTFVPARNLLFLSFAGALAYQVNAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDRDFVIHTPLMWLDKTQTWELSDELGVLDYVRHNTLTCYNGIIGDGCGECPACKLRQRGLHQYLEQKGDASL persistent 225 queC 7-cyano-7-deazaguanine synthase QueC 6.3.4.20 GO:0008616 WP_017175961.1 UPI00030AF5D4 UniRef100_A0A8X8KKC8,UniRef50_O31675,UniRef90_A0A974QN09 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 106911 107504 . + . GCA_005502385.1_01354_gene GCA_005502385.1_01354 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIIVIDNNDSFTYNLIDYIKTKTSHCVKVIKVTEVTVALLEELTIEAIVISPGPGKPSDYPILKSVLDRYASSVPILGICLGFQLIYEYYGGEIMHGPKPVHGHTTPIMHTGKGLFKQLPQNFNVMRYHSLIANRQQLPSQLNITATNNEGIMMAFEHDTLPIFAVQYHPESILSEYGHQQIQYFIERVGKTHEYYV . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 106911 107504 . + . GCA_005502385.1_01354_mRNA GCA_005502385.1_01354 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIIVIDNNDSFTYNLIDYIKTKTSHCVKVIKVTEVTVALLEELTIEAIVISPGPGKPSDYPILKSVLDRYASSVPILGICLGFQLIYEYYGGEIMHGPKPVHGHTTPIMHTGKGLFKQLPQNFNVMRYHSLIANRQQLPSQLNITATNNEGIMMAFEHDTLPIFAVQYHPESILSEYGHQQIQYFIERVGKTHEYYV . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 106911 107504 . + 0 GCA_005502385.1_01354 GCA_005502385.1_01354_gene,GCA_005502385.1_01354_mRNA GCA_005502385.1_01354 Anthranilate synthase component 2 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIIVIDNNDSFTYNLIDYIKTKTSHCVKVIKVTEVTVALLEELTIEAIVISPGPGKPSDYPILKSVLDRYASSVPILGICLGFQLIYEYYGGEIMHGPKPVHGHTTPIMHTGKGLFKQLPQNFNVMRYHSLIANRQQLPSQLNITATNNEGIMMAFEHDTLPIFAVQYHPESILSEYGHQQIQYFIERVGKTHEYYV persistent 197 Aminodeoxychorismate/anthranilate synthase component II WP_017175960.1 UPI000312923E UniRef100_A0A8X8GS21,UniRef50_A0A2T7BWH4,UniRef90_A0A974QN15 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 107488 108630 . + . GCA_005502385.1_01355_gene GCA_005502385.1_01355 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNITFNYRYYTNEDDYINYQLRFDQYISKSIAYSLEEVGEVIQFAEEQQKKGHYVALYLTYESAPFFNNQLETYHLIEKEVYAAAYAFNQPLNSDNNKDNIQYHSVHHFQFQESDEQMRRKIIKIQEAITEGDTYQVNYTTRLSSKVHYPISMLYTYLTHNNNGSYTALLDTEEVKVASISPELFFQKGTFNDKANVIVSKPMKGTMPRGKTSVEDQLNYEKLMYSHKDRAENVMIVDLLRNDMSRISKTGTIEVYKLFFIETYQTVYQMTSMVTGQLEDAISLHSILTAMFPCGSITGAPKQSTMTYIKHLETSPRYIYCGTIGLLLPDDKMIFNIPIRTVEYRNNMALYGVGAGITIDSVPLNEIQEFRDKTKILEEL . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 107488 108630 . + . GCA_005502385.1_01355_mRNA GCA_005502385.1_01355 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNITFNYRYYTNEDDYINYQLRFDQYISKSIAYSLEEVGEVIQFAEEQQKKGHYVALYLTYESAPFFNNQLETYHLIEKEVYAAAYAFNQPLNSDNNKDNIQYHSVHHFQFQESDEQMRRKIIKIQEAITEGDTYQVNYTTRLSSKVHYPISMLYTYLTHNNNGSYTALLDTEEVKVASISPELFFQKGTFNDKANVIVSKPMKGTMPRGKTSVEDQLNYEKLMYSHKDRAENVMIVDLLRNDMSRISKTGTIEVYKLFFIETYQTVYQMTSMVTGQLEDAISLHSILTAMFPCGSITGAPKQSTMTYIKHLETSPRYIYCGTIGLLLPDDKMIFNIPIRTVEYRNNMALYGVGAGITIDSVPLNEIQEFRDKTKILEEL . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 107488 108630 . + 0 GCA_005502385.1_01355 GCA_005502385.1_01355_gene,GCA_005502385.1_01355_mRNA GCA_005502385.1_01355 Isochorismate synthase MenF GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNITFNYRYYTNEDDYINYQLRFDQYISKSIAYSLEEVGEVIQFAEEQQKKGHYVALYLTYESAPFFNNQLETYHLIEKEVYAAAYAFNQPLNSDNNKDNIQYHSVHHFQFQESDEQMRRKIIKIQEAITEGDTYQVNYTTRLSSKVHYPISMLYTYLTHNNNGSYTALLDTEEVKVASISPELFFQKGTFNDKANVIVSKPMKGTMPRGKTSVEDQLNYEKLMYSHKDRAENVMIVDLLRNDMSRISKTGTIEVYKLFFIETYQTVYQMTSMVTGQLEDAISLHSILTAMFPCGSITGAPKQSTMTYIKHLETSPRYIYCGTIGLLLPDDKMIFNIPIRTVEYRNNMALYGVGAGITIDSVPLNEIQEFRDKTKILEEL persistent 380 Anthranilate synthase component I family protein WP_017175959.1 UPI000306366F UniRef100_A0A3S7GXM0,UniRef50_A0A418IG77,UniRef90_A0A6N0I3I6 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 108631 109239 . + . GCA_005502385.1_01356_gene GCA_005502385.1_01356 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKLFETMQLNHGHIPRLNYHTRRLCHSCSQLGFQFSENAWYSYIEKLKQNYNDRLYRLKVEIDKDGQFTHVIQPLSSKDIFTARFKKSNSDYPQKFIINKTTERAHLTHNHETDLILLYDDSGKILEFDIGNIMIKENGNYYTPRYNKDFLRGCMRESLLKNHKLKVKDYTKDELIIKLENEEVEVYLLNSLREVAQVSIYI . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 108631 109239 . + . GCA_005502385.1_01356_mRNA GCA_005502385.1_01356 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKLFETMQLNHGHIPRLNYHTRRLCHSCSQLGFQFSENAWYSYIEKLKQNYNDRLYRLKVEIDKDGQFTHVIQPLSSKDIFTARFKKSNSDYPQKFIINKTTERAHLTHNHETDLILLYDDSGKILEFDIGNIMIKENGNYYTPRYNKDFLRGCMRESLLKNHKLKVKDYTKDELIIKLENEEVEVYLLNSLREVAQVSIYI . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 108631 109239 . + 0 GCA_005502385.1_01356 GCA_005502385.1_01356_gene,GCA_005502385.1_01356_mRNA GCA_005502385.1_01356 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKLFETMQLNHGHIPRLNYHTRRLCHSCSQLGFQFSENAWYSYIEKLKQNYNDRLYRLKVEIDKDGQFTHVIQPLSSKDIFTARFKKSNSDYPQKFIINKTTERAHLTHNHETDLILLYDDSGKILEFDIGNIMIKENGNYYTPRYNKDFLRGCMRESLLKNHKLKVKDYTKDELIIKLENEEVEVYLLNSLREVAQVSIYI persistent 202 Aminotransferase class IV WP_017175958.1 UPI0002D386EA UniRef100_A0A3S7GTT1,UniRef50_A0A8I1BDA0,UniRef90_A0A8I1BDA0 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 109293 109499 . + . GCA_005502385.1_01357_gene GCA_005502385.1_01357 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MALLWLILIVLLNSLSKYIINRYLKHNLIMLPRIVGTMTVLFQFVLVYLLIQSIMPYATHLLNLFYHQ . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 109293 109499 . + . GCA_005502385.1_01357_mRNA GCA_005502385.1_01357 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MALLWLILIVLLNSLSKYIINRYLKHNLIMLPRIVGTMTVLFQFVLVYLLIQSIMPYATHLLNLFYHQ . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 109293 109499 . + 0 GCA_005502385.1_01357 GCA_005502385.1_01357_gene,GCA_005502385.1_01357_mRNA GCA_005502385.1_01357 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MALLWLILIVLLNSLSKYIINRYLKHNLIMLPRIVGTMTVLFQFVLVYLLIQSIMPYATHLLNLFYHQ persistent 68 hypothetical protein WP_049335041.1 UPI00044A0F0A UniRef100_A0A8X8GNJ7,UniRef50_A0A6N0I3A2,UniRef90_A0A6N0I3A2 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 109541 110245 . + . GCA_005502385.1_01358_gene GCA_005502385.1_01358 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKIYSQGDQAIIIDIEQEVAEDVTKNLIAVRTHLLNKDLPFITDIVPTESSMMICYDARDMIKHYNISSPFQYMKALVNSIQTELEHIENKQTACHFHNIPVVYGDQFGPDLEALLKYYRLSKEEFIQLHSKSHYFVSMMGYSPGFPYLTGMNEKLYVNHTSQKKKRVPAGSVIIEGKKCGIVTTDTYNDWLVIGYTPIKLFSPERDHFNLLKLGDNVLFHPKNPNDAELGDFK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 109541 110245 . + . GCA_005502385.1_01358_mRNA GCA_005502385.1_01358 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKIYSQGDQAIIIDIEQEVAEDVTKNLIAVRTHLLNKDLPFITDIVPTESSMMICYDARDMIKHYNISSPFQYMKALVNSIQTELEHIENKQTACHFHNIPVVYGDQFGPDLEALLKYYRLSKEEFIQLHSKSHYFVSMMGYSPGFPYLTGMNEKLYVNHTSQKKKRVPAGSVIIEGKKCGIVTTDTYNDWLVIGYTPIKLFSPERDHFNLLKLGDNVLFHPKNPNDAELGDFK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 109541 110245 . + 0 GCA_005502385.1_01358 GCA_005502385.1_01358_gene,GCA_005502385.1_01358_mRNA GCA_005502385.1_01358 5-oxoprolinase subunit B GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKIYSQGDQAIIIDIEQEVAEDVTKNLIAVRTHLLNKDLPFITDIVPTESSMMICYDARDMIKHYNISSPFQYMKALVNSIQTELEHIENKQTACHFHNIPVVYGDQFGPDLEALLKYYRLSKEEFIQLHSKSHYFVSMMGYSPGFPYLTGMNEKLYVNHTSQKKKRVPAGSVIIEGKKCGIVTTDTYNDWLVIGYTPIKLFSPERDHFNLLKLGDNVLFHPKNPNDAELGDFK persistent 234 Allophanate hydrolase WP_017175957.1 UPI0003137797 UniRef100_A0A8X8GKR1,UniRef50_A0A143PAI6,UniRef90_A0AAE5MYP9 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 110245 111249 . + . GCA_005502385.1_01359_gene GCA_005502385.1_01359 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSIIIEKPGLFSTFQDFGRQGYEYEGVIPGGALDILGHEIANRLVANDKNEATLEMTHIMAKIRFTEPTLIALTGHHFEACTENMKIKPYKLYLVEKGEVLSFKETSTTSRVYLAIGGGFKLDSWLNSTSTDLNIGVGGFHGRTLQEGDEIEMKRDYTSRHRKLLENLAHQRTTSWGIDGYALSFNYVSDVFHVIANKGTNDFDTDIQQTFIHGEYKVTNKSNRVGMLLEGPSIKAYYEDMPEYQPVKKGTIQVKRDGTPIILLNDHYTIGSYPQIGTIASYHLTKLAQKPQGSRLKFQFIDIETAEKNTVKFSNWTNQLFHGIEFRMQLEMLK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 110245 111249 . + . GCA_005502385.1_01359_mRNA GCA_005502385.1_01359 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSIIIEKPGLFSTFQDFGRQGYEYEGVIPGGALDILGHEIANRLVANDKNEATLEMTHIMAKIRFTEPTLIALTGHHFEACTENMKIKPYKLYLVEKGEVLSFKETSTTSRVYLAIGGGFKLDSWLNSTSTDLNIGVGGFHGRTLQEGDEIEMKRDYTSRHRKLLENLAHQRTTSWGIDGYALSFNYVSDVFHVIANKGTNDFDTDIQQTFIHGEYKVTNKSNRVGMLLEGPSIKAYYEDMPEYQPVKKGTIQVKRDGTPIILLNDHYTIGSYPQIGTIASYHLTKLAQKPQGSRLKFQFIDIETAEKNTVKFSNWTNQLFHGIEFRMQLEMLK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 110245 111249 . + 0 GCA_005502385.1_01359 GCA_005502385.1_01359_gene,GCA_005502385.1_01359_mRNA GCA_005502385.1_01359 5-oxoprolinase subunit C GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSIIIEKPGLFSTFQDFGRQGYEYEGVIPGGALDILGHEIANRLVANDKNEATLEMTHIMAKIRFTEPTLIALTGHHFEACTENMKIKPYKLYLVEKGEVLSFKETSTTSRVYLAIGGGFKLDSWLNSTSTDLNIGVGGFHGRTLQEGDEIEMKRDYTSRHRKLLENLAHQRTTSWGIDGYALSFNYVSDVFHVIANKGTNDFDTDIQQTFIHGEYKVTNKSNRVGMLLEGPSIKAYYEDMPEYQPVKKGTIQVKRDGTPIILLNDHYTIGSYPQIGTIASYHLTKLAQKPQGSRLKFQFIDIETAEKNTVKFSNWTNQLFHGIEFRMQLEMLK persistent 334 Biotin-dependent carboxyltransferase family protein WP_017175956.1 UPI0002F2D880 UniRef100_A0A3S7GYC3,UniRef50_Q2G094,UniRef90_A0A6N0I3C3 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 111657 113594 . + . GCA_005502385.1_01360_gene GCA_005502385.1_01360 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSLHKRKISLFAFFLMTVFTVTLKTYFSYYVDFSLGVKGLVQNLILLMNPYSLIALILSIFLFFKGKKAYWFIFIGGFLLTFLLYANVVYFRFFSDFLTFSTLNQASNVQSMGGAVSASFKWYDFVYFLDTIVYLFILIFKRSWLDKRVFSKKFVPVVMAASIALFFLNLAFAETDRPELLTRTFDHKYLVKYLGPYNFTVYDGVKTIQNNQQKALASEDDLTRVLNYTKQKNTEPNPEYYGIAKKKNIIKIHLESFQTFLINKKVNGKEVTPFLNKLSTGNDDFRYYPNFFHQTGQGKTSDSEFTMDNSLYGLPQGSAYSLKGDNTYQSLPAILDQKEGYTSDVMHGDYKTFWNRDQIYKHFGIDKFYDATYYDMSDENVVNLGLKDKPFFKASAEYQSKMKQPFYSHLITLTNHYPFTLNSEDASIDKPNTGDSTVDGYIQTAHYLDQALEQYINDLKTKGLYDDSVIMIYGDHYGISENHNNAMEKLLGEQITPAKFTDLNRTGFWLKIPGKNGTVDETYAGQVDVMPTILNLVGIDSKNYLMLGTDMLSKDHNDVIPFRNGDFITKDYKFVNGKVYSNKNNELITTPPKDLEKNKKQVEKDLEMSDDVLNGDLFRFYNNPDFKKINPSKYDYKIGPYGNQK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 111657 113594 . + . GCA_005502385.1_01360_mRNA GCA_005502385.1_01360 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSLHKRKISLFAFFLMTVFTVTLKTYFSYYVDFSLGVKGLVQNLILLMNPYSLIALILSIFLFFKGKKAYWFIFIGGFLLTFLLYANVVYFRFFSDFLTFSTLNQASNVQSMGGAVSASFKWYDFVYFLDTIVYLFILIFKRSWLDKRVFSKKFVPVVMAASIALFFLNLAFAETDRPELLTRTFDHKYLVKYLGPYNFTVYDGVKTIQNNQQKALASEDDLTRVLNYTKQKNTEPNPEYYGIAKKKNIIKIHLESFQTFLINKKVNGKEVTPFLNKLSTGNDDFRYYPNFFHQTGQGKTSDSEFTMDNSLYGLPQGSAYSLKGDNTYQSLPAILDQKEGYTSDVMHGDYKTFWNRDQIYKHFGIDKFYDATYYDMSDENVVNLGLKDKPFFKASAEYQSKMKQPFYSHLITLTNHYPFTLNSEDASIDKPNTGDSTVDGYIQTAHYLDQALEQYINDLKTKGLYDDSVIMIYGDHYGISENHNNAMEKLLGEQITPAKFTDLNRTGFWLKIPGKNGTVDETYAGQVDVMPTILNLVGIDSKNYLMLGTDMLSKDHNDVIPFRNGDFITKDYKFVNGKVYSNKNNELITTPPKDLEKNKKQVEKDLEMSDDVLNGDLFRFYNNPDFKKINPSKYDYKIGPYGNQK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 111657 113594 . + 0 GCA_005502385.1_01360 GCA_005502385.1_01360_gene,GCA_005502385.1_01360_mRNA GCA_005502385.1_01360 Lipoteichoic acid synthase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSLHKRKISLFAFFLMTVFTVTLKTYFSYYVDFSLGVKGLVQNLILLMNPYSLIALILSIFLFFKGKKAYWFIFIGGFLLTFLLYANVVYFRFFSDFLTFSTLNQASNVQSMGGAVSASFKWYDFVYFLDTIVYLFILIFKRSWLDKRVFSKKFVPVVMAASIALFFLNLAFAETDRPELLTRTFDHKYLVKYLGPYNFTVYDGVKTIQNNQQKALASEDDLTRVLNYTKQKNTEPNPEYYGIAKKKNIIKIHLESFQTFLINKKVNGKEVTPFLNKLSTGNDDFRYYPNFFHQTGQGKTSDSEFTMDNSLYGLPQGSAYSLKGDNTYQSLPAILDQKEGYTSDVMHGDYKTFWNRDQIYKHFGIDKFYDATYYDMSDENVVNLGLKDKPFFKASAEYQSKMKQPFYSHLITLTNHYPFTLNSEDASIDKPNTGDSTVDGYIQTAHYLDQALEQYINDLKTKGLYDDSVIMIYGDHYGISENHNNAMEKLLGEQITPAKFTDLNRTGFWLKIPGKNGTVDETYAGQVDVMPTILNLVGIDSKNYLMLGTDMLSKDHNDVIPFRNGDFITKDYKFVNGKVYSNKNNELITTPPKDLEKNKKQVEKDLEMSDDVLNGDLFRFYNNPDFKKINPSKYDYKIGPYGNQK persistent 645 ltaS polyglycerol-phosphate lipoteichoic acid synthase LtaS 2.7.8.20 WP_017175955.1 UPI00031E8244 UniRef100_A0A3S7GWZ8,UniRef50_Q797B3,UniRef90_A0A3S7GWZ8 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 113886 114704 . - . GCA_005502385.1_01361_gene GCA_005502385.1_01361 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIDFFENLPPYLQALIAGIITWLLTALGAASVFIFKTVNKKILTSMQGFAAGIMIAASFWSLLQPSIDYGTNGHLPAWLPAAIGFILGGVFIRGLDAVIPHIHQKIGDKSQYREGVKTSLSKNALLVLAITLHNIPEGLSIGVAFGGIATGNGQATFFGALGLAIGIGIQNIPEGAALSMPIRAAGATRFKAFNYGQASAIVEPIFATIGAIAIIFITPVLPYALAFAAGAMIFVVVEELIPDSQSGNNTDLATLSLMLGFVIMMILDVSLG . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 113886 114704 . - . GCA_005502385.1_01361_mRNA GCA_005502385.1_01361 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIDFFENLPPYLQALIAGIITWLLTALGAASVFIFKTVNKKILTSMQGFAAGIMIAASFWSLLQPSIDYGTNGHLPAWLPAAIGFILGGVFIRGLDAVIPHIHQKIGDKSQYREGVKTSLSKNALLVLAITLHNIPEGLSIGVAFGGIATGNGQATFFGALGLAIGIGIQNIPEGAALSMPIRAAGATRFKAFNYGQASAIVEPIFATIGAIAIIFITPVLPYALAFAAGAMIFVVVEELIPDSQSGNNTDLATLSLMLGFVIMMILDVSLG . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 113886 114704 . - 0 GCA_005502385.1_01361 GCA_005502385.1_01361_gene,GCA_005502385.1_01361_mRNA GCA_005502385.1_01361 Zinc transporter ZupT GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIDFFENLPPYLQALIAGIITWLLTALGAASVFIFKTVNKKILTSMQGFAAGIMIAASFWSLLQPSIDYGTNGHLPAWLPAAIGFILGGVFIRGLDAVIPHIHQKIGDKSQYREGVKTSLSKNALLVLAITLHNIPEGLSIGVAFGGIATGNGQATFFGALGLAIGIGIQNIPEGAALSMPIRAAGATRFKAFNYGQASAIVEPIFATIGAIAIIFITPVLPYALAFAAGAMIFVVVEELIPDSQSGNNTDLATLSLMLGFVIMMILDVSLG persistent 272 zupT ZIP family metal transporter COG0428,P WP_002455634.1 UPI0001EF5419 UniRef100_A0A8X8KIE3,UniRef50_S2XN82,UniRef90_A0A2K0A9L8 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 114816 116696 . + . GCA_005502385.1_01362_gene GCA_005502385.1_01362 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEAYKIEQLNKSYADKVIFDDLNLSISEHEKIGLVGINGTGKSTLLKVIGGLDEDFSADITHPNQYRIRYSSQKQHLDGDMTVFQAVLSSDTDTLRIIKTYEEAVTIYTEHQNDANFKKMMEAQELMDQHHAWDYNAEIKTILSKLGINHTTKKVKELSGGQQKRVVLAKTLIEQPDLLLLDEPTNHLDFESINWLINYVKQYPHTVLFVTHDRYFLNEIATRIVELDRGKLKSYPGNYEDYIAMRAENEVIEQKQQEKQKALYKQELAWMRTGAKARTTKQQARINRFNDLETEVQSHHQKDKGQLNLAYSRLGKQVFELDHLTKKIQNKILFKDVTEIIQSGQRIGIVGPNGAGKTTMLNILNQDDTDYSGELKVGQTVKIAYFKQTEETLDSDIRMIDYLREESEVAKEKDGTSVSVTQLLERFLFPSAAHGKKIYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTILEDYISTFGGSVVTVSHDRYFLNKVAQEYWYIHDGQLERIIGTFEDYEAYKKEKDRQDTLEKQAQQPKTKSNIRKKTGLSYKEKREYEALMERIETTEHRLEQIDAEMVEASADYAKIKELNEEKEHLEQSYDVDITRWSELEEIKEQ . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 114816 116696 . + . GCA_005502385.1_01362_mRNA GCA_005502385.1_01362 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEAYKIEQLNKSYADKVIFDDLNLSISEHEKIGLVGINGTGKSTLLKVIGGLDEDFSADITHPNQYRIRYSSQKQHLDGDMTVFQAVLSSDTDTLRIIKTYEEAVTIYTEHQNDANFKKMMEAQELMDQHHAWDYNAEIKTILSKLGINHTTKKVKELSGGQQKRVVLAKTLIEQPDLLLLDEPTNHLDFESINWLINYVKQYPHTVLFVTHDRYFLNEIATRIVELDRGKLKSYPGNYEDYIAMRAENEVIEQKQQEKQKALYKQELAWMRTGAKARTTKQQARINRFNDLETEVQSHHQKDKGQLNLAYSRLGKQVFELDHLTKKIQNKILFKDVTEIIQSGQRIGIVGPNGAGKTTMLNILNQDDTDYSGELKVGQTVKIAYFKQTEETLDSDIRMIDYLREESEVAKEKDGTSVSVTQLLERFLFPSAAHGKKIYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTILEDYISTFGGSVVTVSHDRYFLNKVAQEYWYIHDGQLERIIGTFEDYEAYKKEKDRQDTLEKQAQQPKTKSNIRKKTGLSYKEKREYEALMERIETTEHRLEQIDAEMVEASADYAKIKELNEEKEHLEQSYDVDITRWSELEEIKEQ . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 114816 116696 . + 0 GCA_005502385.1_01362 GCA_005502385.1_01362_gene,GCA_005502385.1_01362_mRNA GCA_005502385.1_01362 Energy-dependent translational throttle protein EttA GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEAYKIEQLNKSYADKVIFDDLNLSISEHEKIGLVGINGTGKSTLLKVIGGLDEDFSADITHPNQYRIRYSSQKQHLDGDMTVFQAVLSSDTDTLRIIKTYEEAVTIYTEHQNDANFKKMMEAQELMDQHHAWDYNAEIKTILSKLGINHTTKKVKELSGGQQKRVVLAKTLIEQPDLLLLDEPTNHLDFESINWLINYVKQYPHTVLFVTHDRYFLNEIATRIVELDRGKLKSYPGNYEDYIAMRAENEVIEQKQQEKQKALYKQELAWMRTGAKARTTKQQARINRFNDLETEVQSHHQKDKGQLNLAYSRLGKQVFELDHLTKKIQNKILFKDVTEIIQSGQRIGIVGPNGAGKTTMLNILNQDDTDYSGELKVGQTVKIAYFKQTEETLDSDIRMIDYLREESEVAKEKDGTSVSVTQLLERFLFPSAAHGKKIYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTILEDYISTFGGSVVTVSHDRYFLNKVAQEYWYIHDGQLERIIGTFEDYEAYKKEKDRQDTLEKQAQQPKTKSNIRKKTGLSYKEKREYEALMERIETTEHRLEQIDAEMVEASADYAKIKELNEEKEHLEQSYDVDITRWSELEEIKEQ persistent 626 abc-f ribosomal protection-like ABC-F family protein GO:0003677,GO:0005524,GO:0016887 WP_017175954.1 UPI000300FAB1 UniRef100_A0A3S7GU67,UniRef50_S2Y7N2,UniRef90_A0A3S7GU67 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 116710 118488 . + . GCA_005502385.1_01363_gene GCA_005502385.1_01363 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEATLSHYFGYDTFRPGQKEIISKILNHHNVLGVLPTGGGKSICYQVPGLMLGGTTIVISPLISLMKDQVDQLKAMGIKAAYLNSSLNKKQQSEIENKLITEGIQFLYVAPERFESNYFLKLLSQIDINLIAFDEAHCISKWGHDFRPSYQSVINKVFTLPQDFTIVALTATATAEVQQDIMEKLNIRKEDEIKTSTKRRNLIFKVNPTYQRQNFVIEYAKAHKDQAGIIYCSTRKQVEELQESLESINIASAIYHAGLTNKEREEAQNDFVYDRIKVVIATNAFGMGIDKSNVRYVIHYNMPGDLESYYQEAGRAGRDGLKSECILLFSERDKGLHEYFITVSQADDDYKDKMGEKLTKMIQYTKTKKCLEATIVHYFEPNARLEECGQCSNCIQQNKTYDMTNEAKMIISCIARMRQQENYHVIIQVLRGELSDYIKYNHYHQLTTHGLMKDYTTSELSHLIDELRFKGFLNEYNEILTCDESVKELLNNDVTVYTTPFKHKSKEKVFINTIEGVDRALYSELVEVRRQLSEKLNIAPVSIFSDYTLEEFAKRKPESKQEMIAIDGVGSYKLKHYCPKFLETIQSYKTNI . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 116710 118488 . + . GCA_005502385.1_01363_mRNA GCA_005502385.1_01363 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEATLSHYFGYDTFRPGQKEIISKILNHHNVLGVLPTGGGKSICYQVPGLMLGGTTIVISPLISLMKDQVDQLKAMGIKAAYLNSSLNKKQQSEIENKLITEGIQFLYVAPERFESNYFLKLLSQIDINLIAFDEAHCISKWGHDFRPSYQSVINKVFTLPQDFTIVALTATATAEVQQDIMEKLNIRKEDEIKTSTKRRNLIFKVNPTYQRQNFVIEYAKAHKDQAGIIYCSTRKQVEELQESLESINIASAIYHAGLTNKEREEAQNDFVYDRIKVVIATNAFGMGIDKSNVRYVIHYNMPGDLESYYQEAGRAGRDGLKSECILLFSERDKGLHEYFITVSQADDDYKDKMGEKLTKMIQYTKTKKCLEATIVHYFEPNARLEECGQCSNCIQQNKTYDMTNEAKMIISCIARMRQQENYHVIIQVLRGELSDYIKYNHYHQLTTHGLMKDYTTSELSHLIDELRFKGFLNEYNEILTCDESVKELLNNDVTVYTTPFKHKSKEKVFINTIEGVDRALYSELVEVRRQLSEKLNIAPVSIFSDYTLEEFAKRKPESKQEMIAIDGVGSYKLKHYCPKFLETIQSYKTNI . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 116710 118488 . + 0 GCA_005502385.1_01363 GCA_005502385.1_01363_gene,GCA_005502385.1_01363_mRNA GCA_005502385.1_01363 ATP-dependent DNA helicase RecQ GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEATLSHYFGYDTFRPGQKEIISKILNHHNVLGVLPTGGGKSICYQVPGLMLGGTTIVISPLISLMKDQVDQLKAMGIKAAYLNSSLNKKQQSEIENKLITEGIQFLYVAPERFESNYFLKLLSQIDINLIAFDEAHCISKWGHDFRPSYQSVINKVFTLPQDFTIVALTATATAEVQQDIMEKLNIRKEDEIKTSTKRRNLIFKVNPTYQRQNFVIEYAKAHKDQAGIIYCSTRKQVEELQESLESINIASAIYHAGLTNKEREEAQNDFVYDRIKVVIATNAFGMGIDKSNVRYVIHYNMPGDLESYYQEAGRAGRDGLKSECILLFSERDKGLHEYFITVSQADDDYKDKMGEKLTKMIQYTKTKKCLEATIVHYFEPNARLEECGQCSNCIQQNKTYDMTNEAKMIISCIARMRQQENYHVIIQVLRGELSDYIKYNHYHQLTTHGLMKDYTTSELSHLIDELRFKGFLNEYNEILTCDESVKELLNNDVTVYTTPFKHKSKEKVFINTIEGVDRALYSELVEVRRQLSEKLNIAPVSIFSDYTLEEFAKRKPESKQEMIAIDGVGSYKLKHYCPKFLETIQSYKTNI persistent 592 recQ DNA helicase RecQ 5.6.2.4 GO:0003678,GO:0006310,GO:0009432 WP_017175953.1 UPI0003170493 UniRef100_A0A3S7GU14,UniRef50_Q2G090,UniRef90_A0A3S7GU14 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 118678 119634 . + . GCA_005502385.1_01364_gene GCA_005502385.1_01364 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIEFKNVTKRYGTNVAVDDVSFKINEGEFFILIGPSGCGKTTTLKMINRLISLSEGYIYFKDKPVSDYPVYEMRWDIGYVLQQIALFPHMTIKENIAQVPQMKKWKDKDIHRRVDELLDMVRLDPNTYRDRKPDELSGGQRQRVGVVRALAADPPVILMDEPFSALDPISREKLQDDLLELQTKIKKTIIFVTHDIQEAMKLGDRICLLNDGRVEQIDTPEGFQEHPKNQFVREFMGDHLHKDINNSKISDLNLTRTLTEYDEKQGYPIIKDSMKLQDIYEILAKHEAVIVENNHALTQSLLRREDVFDYLSKNDKEG . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 118678 119634 . + . GCA_005502385.1_01364_mRNA GCA_005502385.1_01364 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIEFKNVTKRYGTNVAVDDVSFKINEGEFFILIGPSGCGKTTTLKMINRLISLSEGYIYFKDKPVSDYPVYEMRWDIGYVLQQIALFPHMTIKENIAQVPQMKKWKDKDIHRRVDELLDMVRLDPNTYRDRKPDELSGGQRQRVGVVRALAADPPVILMDEPFSALDPISREKLQDDLLELQTKIKKTIIFVTHDIQEAMKLGDRICLLNDGRVEQIDTPEGFQEHPKNQFVREFMGDHLHKDINNSKISDLNLTRTLTEYDEKQGYPIIKDSMKLQDIYEILAKHEAVIVENNHALTQSLLRREDVFDYLSKNDKEG . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 118678 119634 . + 0 GCA_005502385.1_01364 GCA_005502385.1_01364_gene,GCA_005502385.1_01364_mRNA GCA_005502385.1_01364 Vitamin B12 import ATP-binding protein BtuD GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIEFKNVTKRYGTNVAVDDVSFKINEGEFFILIGPSGCGKTTTLKMINRLISLSEGYIYFKDKPVSDYPVYEMRWDIGYVLQQIALFPHMTIKENIAQVPQMKKWKDKDIHRRVDELLDMVRLDPNTYRDRKPDELSGGQRQRVGVVRALAADPPVILMDEPFSALDPISREKLQDDLLELQTKIKKTIIFVTHDIQEAMKLGDRICLLNDGRVEQIDTPEGFQEHPKNQFVREFMGDHLHKDINNSKISDLNLTRTLTEYDEKQGYPIIKDSMKLQDIYEILAKHEAVIVENNHALTQSLLRREDVFDYLSKNDKEG persistent 318 ABC transporter ATP-binding protein WP_017175952.1 UPI00030629DE UniRef100_A0A3S7GU44,UniRef50_S2YNZ1,UniRef90_A0A3S7GU44 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 119638 121152 . + . GCA_005502385.1_01365_gene GCA_005502385.1_01365 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNEFLTTLNDRRGELLRTIFEHIQISFIALFIAILIAVPLGIALTKTKRLSEVVMNIAAVLQTIPSLALLGLMIPIFGIGKVPAIIALVVYALLPILRNTYTGIKEVEPSLTEAAKGIGMKPMRRLTKVELPIAMPVIMAGIRTAMVLIIGTATLAALIGAGGLGDLILLGIDRNNTALILIGAIPAALLAILFDFILRYMAKLSYKKLLITLGIILLIILLVIVVPLFGKKGATITMAGKLGSEPSIITNMYKILIEEETHDTVNVKSGMGKTSFLFNALKSDDIDGYLEFTGTVLGELTKEDLKSKKEADVYHQAKASLEKKYDMTMLKPMKYNNTYALAVKRDFAKQYNLQSIGDLRKVQGQLKPGFTMEFKDRDDGYKAVAKKYNLNLSNIKQMEPKLRYTAVEKGDINLIDAYSTDAELKQYDMVVLKDDKHVFPPYQGAPMFKEKFLKEHPEIKKALNQLSNKITDEQMQEMNYKVTVKNEDPYKVAKQYLEKEGLSH . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 119638 121152 . + . GCA_005502385.1_01365_mRNA GCA_005502385.1_01365 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNEFLTTLNDRRGELLRTIFEHIQISFIALFIAILIAVPLGIALTKTKRLSEVVMNIAAVLQTIPSLALLGLMIPIFGIGKVPAIIALVVYALLPILRNTYTGIKEVEPSLTEAAKGIGMKPMRRLTKVELPIAMPVIMAGIRTAMVLIIGTATLAALIGAGGLGDLILLGIDRNNTALILIGAIPAALLAILFDFILRYMAKLSYKKLLITLGIILLIILLVIVVPLFGKKGATITMAGKLGSEPSIITNMYKILIEEETHDTVNVKSGMGKTSFLFNALKSDDIDGYLEFTGTVLGELTKEDLKSKKEADVYHQAKASLEKKYDMTMLKPMKYNNTYALAVKRDFAKQYNLQSIGDLRKVQGQLKPGFTMEFKDRDDGYKAVAKKYNLNLSNIKQMEPKLRYTAVEKGDINLIDAYSTDAELKQYDMVVLKDDKHVFPPYQGAPMFKEKFLKEHPEIKKALNQLSNKITDEQMQEMNYKVTVKNEDPYKVAKQYLEKEGLSH . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 119638 121152 . + 0 GCA_005502385.1_01365 GCA_005502385.1_01365_gene,GCA_005502385.1_01365_mRNA GCA_005502385.1_01365 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNEFLTTLNDRRGELLRTIFEHIQISFIALFIAILIAVPLGIALTKTKRLSEVVMNIAAVLQTIPSLALLGLMIPIFGIGKVPAIIALVVYALLPILRNTYTGIKEVEPSLTEAAKGIGMKPMRRLTKVELPIAMPVIMAGIRTAMVLIIGTATLAALIGAGGLGDLILLGIDRNNTALILIGAIPAALLAILFDFILRYMAKLSYKKLLITLGIILLIILLVIVVPLFGKKGATITMAGKLGSEPSIITNMYKILIEEETHDTVNVKSGMGKTSFLFNALKSDDIDGYLEFTGTVLGELTKEDLKSKKEADVYHQAKASLEKKYDMTMLKPMKYNNTYALAVKRDFAKQYNLQSIGDLRKVQGQLKPGFTMEFKDRDDGYKAVAKKYNLNLSNIKQMEPKLRYTAVEKGDINLIDAYSTDAELKQYDMVVLKDDKHVFPPYQGAPMFKEKFLKEHPEIKKALNQLSNKITDEQMQEMNYKVTVKNEDPYKVAKQYLEKEGLSH persistent 504 ABC transporter permease/substrate-binding protein WP_017175951.1 UPI0003088C60 UniRef100_A0A3S7GTS3,UniRef50_A0A0H2XK79,UniRef90_A0A3S7GTS3 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 121288 122343 . + . GCA_005502385.1_01366_gene GCA_005502385.1_01366 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKQLQQLSAYQPGLSPQALKEKFGIEGELYKLASNENLYGPSPRVKEAIEAHLDELFYYPETGSPSLRKAISKHLNVDESRILFGAGLDEVILMISRAVLTPGDKIVTSEATFGQYYHNAIVESAEVVKVPLKNGGFDLEGILKEVNSDTSLVWLCNPNNPTGTYFSHDELESFLERVPSHVPVLIDEAYFEFVTAEDYPDTLKLQERFDNAFLLRTFSKAYGLAGLRVGYVVATNEAIEKWNIIRPPFNVTRISEYAAIAALEDQDYLKEITRKNAKEREKFYNIEQSKHFLPSQTNFVFVVTDKPQALYNELLNVGCITRPFPNGVRITIGFEEQNNKMIEVLKQFNY . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 121288 122343 . + . GCA_005502385.1_01366_mRNA GCA_005502385.1_01366 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKQLQQLSAYQPGLSPQALKEKFGIEGELYKLASNENLYGPSPRVKEAIEAHLDELFYYPETGSPSLRKAISKHLNVDESRILFGAGLDEVILMISRAVLTPGDKIVTSEATFGQYYHNAIVESAEVVKVPLKNGGFDLEGILKEVNSDTSLVWLCNPNNPTGTYFSHDELESFLERVPSHVPVLIDEAYFEFVTAEDYPDTLKLQERFDNAFLLRTFSKAYGLAGLRVGYVVATNEAIEKWNIIRPPFNVTRISEYAAIAALEDQDYLKEITRKNAKEREKFYNIEQSKHFLPSQTNFVFVVTDKPQALYNELLNVGCITRPFPNGVRITIGFEEQNNKMIEVLKQFNY . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 121288 122343 . + 0 GCA_005502385.1_01366 GCA_005502385.1_01366_gene,GCA_005502385.1_01366_mRNA GCA_005502385.1_01366 Histidinol-phosphate aminotransferase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKQLQQLSAYQPGLSPQALKEKFGIEGELYKLASNENLYGPSPRVKEAIEAHLDELFYYPETGSPSLRKAISKHLNVDESRILFGAGLDEVILMISRAVLTPGDKIVTSEATFGQYYHNAIVESAEVVKVPLKNGGFDLEGILKEVNSDTSLVWLCNPNNPTGTYFSHDELESFLERVPSHVPVLIDEAYFEFVTAEDYPDTLKLQERFDNAFLLRTFSKAYGLAGLRVGYVVATNEAIEKWNIIRPPFNVTRISEYAAIAALEDQDYLKEITRKNAKEREKFYNIEQSKHFLPSQTNFVFVVTDKPQALYNELLNVGCITRPFPNGVRITIGFEEQNNKMIEVLKQFNY persistent 351 hisC histidinol-phosphate transaminase 2.6.1.9 GO:0000105,GO:0004400 WP_017175950.1 UPI0002FF8348 UniRef100_A0A3S7GXL1,UniRef50_Q2G087,UniRef90_A0A3S7GXL1 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 122438 122974 . + . GCA_005502385.1_01367_gene GCA_005502385.1_01367 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MARKSIAIDMDEVLADTLGAIIEAVNIETKLGITMESLHGQKLNHVIPEHDGLVRDILRAPEFFRHLKVIPHAQEVVEKLNEHYDVYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFIFCGRKNIVKTDYLIDDNPRQLQIFEGEPIIFTAAHNINETRFKRVNGWKDVEAMFLNNN . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 122438 122974 . + . GCA_005502385.1_01367_mRNA GCA_005502385.1_01367 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MARKSIAIDMDEVLADTLGAIIEAVNIETKLGITMESLHGQKLNHVIPEHDGLVRDILRAPEFFRHLKVIPHAQEVVEKLNEHYDVYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFIFCGRKNIVKTDYLIDDNPRQLQIFEGEPIIFTAAHNINETRFKRVNGWKDVEAMFLNNN . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 122438 122974 . + 0 GCA_005502385.1_01367 GCA_005502385.1_01367_gene,GCA_005502385.1_01367_mRNA GCA_005502385.1_01367 Putative 5'(3')-deoxyribonucleotidase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MARKSIAIDMDEVLADTLGAIIEAVNIETKLGITMESLHGQKLNHVIPEHDGLVRDILRAPEFFRHLKVIPHAQEVVEKLNEHYDVYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFIFCGRKNIVKTDYLIDDNPRQLQIFEGEPIIFTAAHNINETRFKRVNGWKDVEAMFLNNN persistent 178 Putative 5'(3')-deoxyribonucleotidase WP_017175949.1 UPI0003125BCF UniRef100_A0A4Q9WQN3,UniRef50_Q5HR07,UniRef90_A0A4Q9WQN3 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 123037 123960 . - . GCA_005502385.1_01368_gene GCA_005502385.1_01368 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEQQYNHGVLFYHEHSGLKDIYDGLGEVAKSLTQLCKHLSIQLSENEGDIERYCKEIKDHTYSNDIDIVFILGGDGTVNELINGVMKYDLDLPIGIIPGGTFNDFTKTLNLNPDFKKASEQLLSSHIESYDVMKVNDNYVLNFVGLGLIVQNAENVQEGRKDIFGKLSYVGSTVKTLMNPEHFDYTLTVDDKEYKGNTSMLVIANGPNIGGSRIPLTDLSPQDGKLNSFIFEQQSFSILNDIFKKRDSMNWNEITEGINHIPGSHITLRTEPNMKVDIDGEINLETPITIDVLPKAINILTFSNDEK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 123037 123960 . - . GCA_005502385.1_01368_mRNA GCA_005502385.1_01368 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEQQYNHGVLFYHEHSGLKDIYDGLGEVAKSLTQLCKHLSIQLSENEGDIERYCKEIKDHTYSNDIDIVFILGGDGTVNELINGVMKYDLDLPIGIIPGGTFNDFTKTLNLNPDFKKASEQLLSSHIESYDVMKVNDNYVLNFVGLGLIVQNAENVQEGRKDIFGKLSYVGSTVKTLMNPEHFDYTLTVDDKEYKGNTSMLVIANGPNIGGSRIPLTDLSPQDGKLNSFIFEQQSFSILNDIFKKRDSMNWNEITEGINHIPGSHITLRTEPNMKVDIDGEINLETPITIDVLPKAINILTFSNDEK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 123037 123960 . - 0 GCA_005502385.1_01368 GCA_005502385.1_01368_gene,GCA_005502385.1_01368_mRNA GCA_005502385.1_01368 Putative lipid kinase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MEQQYNHGVLFYHEHSGLKDIYDGLGEVAKSLTQLCKHLSIQLSENEGDIERYCKEIKDHTYSNDIDIVFILGGDGTVNELINGVMKYDLDLPIGIIPGGTFNDFTKTLNLNPDFKKASEQLLSSHIESYDVMKVNDNYVLNFVGLGLIVQNAENVQEGRKDIFGKLSYVGSTVKTLMNPEHFDYTLTVDDKEYKGNTSMLVIANGPNIGGSRIPLTDLSPQDGKLNSFIFEQQSFSILNDIFKKRDSMNWNEITEGINHIPGSHITLRTEPNMKVDIDGEINLETPITIDVLPKAINILTFSNDEK persistent 307 Diacylglycerol kinase family lipid kinase WP_017175948.1 UPI0002EA9280 UniRef100_A0A4Q9WUB0,UniRef50_Q6GIR5,UniRef90_A0A6N0I3A3 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 124090 125595 . - . GCA_005502385.1_01369_gene GCA_005502385.1_01369 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MATNNSHEQTIQSIPQKGFFGHPRGLGVLFFVEFWERFSYYGMRAMLIFYMYFAIHQNGLGIDQTTAMSIMSVYGALIYMSSIPGAWIADRITGTRGATLLGAVLIIIGHICLSLPFALFGLFSSMFFIIIGSGLMKPNISNIVGRLYPENDTRIDAGFVIFYMSVNLGALISPIILQHFVDIRNFHGGFLLAAIGMALGLVWYLLFNRKNLGSVGMKPTNPLSKEEKRKYGMIIGIIVAIVIIVLLVTYYTHTLSFDLISNTVLVLGVALPIIYFTTMLRSKDVTDVERSRVKAFIPLFILGMLFWSIQEQGSNVLNIYGLERSDMQLNLFGWTTRFGEALFQSINPLFILLFAPVISMIWLKMGKKQPSLAIKFGIGTLLAGLSYILIGLVGLGYGHTQFSVNWVILSYVICVIGELCLSPTGNSAAVKLAPKAFNAQMMSVWLLTNASAQAINGTLVKLIKPLGQTNYFIFLGTVAIVITLIILVFSPKITKAMKGIH . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 124090 125595 . - . GCA_005502385.1_01369_mRNA GCA_005502385.1_01369 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MATNNSHEQTIQSIPQKGFFGHPRGLGVLFFVEFWERFSYYGMRAMLIFYMYFAIHQNGLGIDQTTAMSIMSVYGALIYMSSIPGAWIADRITGTRGATLLGAVLIIIGHICLSLPFALFGLFSSMFFIIIGSGLMKPNISNIVGRLYPENDTRIDAGFVIFYMSVNLGALISPIILQHFVDIRNFHGGFLLAAIGMALGLVWYLLFNRKNLGSVGMKPTNPLSKEEKRKYGMIIGIIVAIVIIVLLVTYYTHTLSFDLISNTVLVLGVALPIIYFTTMLRSKDVTDVERSRVKAFIPLFILGMLFWSIQEQGSNVLNIYGLERSDMQLNLFGWTTRFGEALFQSINPLFILLFAPVISMIWLKMGKKQPSLAIKFGIGTLLAGLSYILIGLVGLGYGHTQFSVNWVILSYVICVIGELCLSPTGNSAAVKLAPKAFNAQMMSVWLLTNASAQAINGTLVKLIKPLGQTNYFIFLGTVAIVITLIILVFSPKITKAMKGIH . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 124090 125595 . - 0 GCA_005502385.1_01369 GCA_005502385.1_01369_gene,GCA_005502385.1_01369_mRNA GCA_005502385.1_01369 Di-/tripeptide transporter GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MATNNSHEQTIQSIPQKGFFGHPRGLGVLFFVEFWERFSYYGMRAMLIFYMYFAIHQNGLGIDQTTAMSIMSVYGALIYMSSIPGAWIADRITGTRGATLLGAVLIIIGHICLSLPFALFGLFSSMFFIIIGSGLMKPNISNIVGRLYPENDTRIDAGFVIFYMSVNLGALISPIILQHFVDIRNFHGGFLLAAIGMALGLVWYLLFNRKNLGSVGMKPTNPLSKEEKRKYGMIIGIIVAIVIIVLLVTYYTHTLSFDLISNTVLVLGVALPIIYFTTMLRSKDVTDVERSRVKAFIPLFILGMLFWSIQEQGSNVLNIYGLERSDMQLNLFGWTTRFGEALFQSINPLFILLFAPVISMIWLKMGKKQPSLAIKFGIGTLLAGLSYILIGLVGLGYGHTQFSVNWVILSYVICVIGELCLSPTGNSAAVKLAPKAFNAQMMSVWLLTNASAQAINGTLVKLIKPLGQTNYFIFLGTVAIVITLIILVFSPKITKAMKGIH persistent 501 S-Cys-Gly-3M3SH uptake peptide MFS transporter WP_017175947.1 UPI0002E8ED45 UniRef100_A0A8X8GS28,UniRef50_Q2G082,UniRef90_A0A8X8GS28 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 125896 126396 . - . GCA_005502385.1_01370_gene GCA_005502385.1_01370 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTQGRNKEELQDITLLGNQNNKYEFDYTPQVLETFDNKHQGRDYFVKFNCPEFTSLCPITGQPDFATIYISYIPNIKMVESKSLKLYLFSFRNHGDFHEDCMNIIMNDLIDLMDPHYIEVWGKFTPRGGISIDPYTNYGRPNSKYEKMAEHRLMNHDMYPEKIDNR . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 125896 126396 . - . GCA_005502385.1_01370_mRNA GCA_005502385.1_01370 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTQGRNKEELQDITLLGNQNNKYEFDYTPQVLETFDNKHQGRDYFVKFNCPEFTSLCPITGQPDFATIYISYIPNIKMVESKSLKLYLFSFRNHGDFHEDCMNIIMNDLIDLMDPHYIEVWGKFTPRGGISIDPYTNYGRPNSKYEKMAEHRLMNHDMYPEKIDNR . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 125896 126396 . - 0 GCA_005502385.1_01370 GCA_005502385.1_01370_gene,GCA_005502385.1_01370_mRNA GCA_005502385.1_01370 NADPH-dependent 7-cyano-7-deazaguanine reductase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTQGRNKEELQDITLLGNQNNKYEFDYTPQVLETFDNKHQGRDYFVKFNCPEFTSLCPITGQPDFATIYISYIPNIKMVESKSLKLYLFSFRNHGDFHEDCMNIIMNDLIDLMDPHYIEVWGKFTPRGGISIDPYTNYGRPNSKYEKMAEHRLMNHDMYPEKIDNR persistent 166 queF preQ(1) synthase 1.7.1.13 GO:0005737,GO:0006400,GO:0008616,GO:0033739,GO:0046857 COG0780,J WP_002449091.1 UPI00019FC0C5 UniRef100_A0A1L8Y4P7,UniRef50_Q2G081,UniRef90_Q2G081 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 126407 127273 . - . GCA_005502385.1_01371_gene GCA_005502385.1_01371 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNLVAMFIPLFFIIKYRQPILGKMSSQPLLMTRSTLGLIGVLLNIYAIDHMVLSDADTLMKLNPFWTILLSLIFLKENIKRYQIIAMLIAIFGMLFIVKPEFSSTMFSSLAGLFSGIFAASAYTCVRALSKREAPYTIVFYFSLFSVIVLIPFSIATYEPMTKLQIIYLLGAGLSAAVGQIGITLAYSFAPAKDISIFTYASILFTALFGFILFGETPDFYAFIGYIIIIGASYFMFEKARRQSNTSNN . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 126407 127273 . - . GCA_005502385.1_01371_mRNA GCA_005502385.1_01371 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNLVAMFIPLFFIIKYRQPILGKMSSQPLLMTRSTLGLIGVLLNIYAIDHMVLSDADTLMKLNPFWTILLSLIFLKENIKRYQIIAMLIAIFGMLFIVKPEFSSTMFSSLAGLFSGIFAASAYTCVRALSKREAPYTIVFYFSLFSVIVLIPFSIATYEPMTKLQIIYLLGAGLSAAVGQIGITLAYSFAPAKDISIFTYASILFTALFGFILFGETPDFYAFIGYIIIIGASYFMFEKARRQSNTSNN . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 126407 127273 . - 0 GCA_005502385.1_01371 GCA_005502385.1_01371_gene,GCA_005502385.1_01371_mRNA GCA_005502385.1_01371 Pseudopaline exporter CntI GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNLVAMFIPLFFIIKYRQPILGKMSSQPLLMTRSTLGLIGVLLNIYAIDHMVLSDADTLMKLNPFWTILLSLIFLKENIKRYQIIAMLIAIFGMLFIVKPEFSSTMFSSLAGLFSGIFAASAYTCVRALSKREAPYTIVFYFSLFSVIVLIPFSIATYEPMTKLQIIYLLGAGLSAAVGQIGITLAYSFAPAKDISIFTYASILFTALFGFILFGETPDFYAFIGYIIIIGASYFMFEKARRQSNTSNN persistent 288 DMT family transporter WP_002449096.1 UPI00019FC0C6 UniRef100_A0A1L8Y4Q7,UniRef50_S2XME9,UniRef90_A0A1L8Y4Q7 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 128011 128409 . + . GCA_005502385.1_01372_gene GCA_005502385.1_01372 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKVVYFSFSGNVRRFIKRSEIKNVLEINKDNCKDRIEEPYILVTGTIGFGEVPKEVQSFLEVNHAHIRAVAASGNRNWGQNFAKAGRTISETYHVPLLMKFEVQGTNKDVIEFRDKVGHFNEDYGREKVQSY . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 128011 128409 . + . GCA_005502385.1_01372_mRNA GCA_005502385.1_01372 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKVVYFSFSGNVRRFIKRSEIKNVLEINKDNCKDRIEEPYILVTGTIGFGEVPKEVQSFLEVNHAHIRAVAASGNRNWGQNFAKAGRTISETYHVPLLMKFEVQGTNKDVIEFRDKVGHFNEDYGREKVQSY . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 128011 128409 . + 0 GCA_005502385.1_01372 GCA_005502385.1_01372_gene,GCA_005502385.1_01372_mRNA GCA_005502385.1_01372 Protein NrdI GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKVVYFSFSGNVRRFIKRSEIKNVLEINKDNCKDRIEEPYILVTGTIGFGEVPKEVQSFLEVNHAHIRAVAASGNRNWGQNFAKAGRTISETYHVPLLMKFEVQGTNKDVIEFRDKVGHFNEDYGREKVQSY persistent 132 nrdI class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI GO:0009263,GO:0010181,GO:0036211 WP_017175945.1 UPI0002FDEDBA UniRef100_A0A3S7GU56,UniRef50_Q2G079,UniRef90_A0A1L8Y4S5 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 128372 130477 . + . GCA_005502385.1_01373_gene GCA_005502385.1_01373 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKIMDEKKYNHIELNNEVTKRKDNGFFNLEKDQEALNVYLEEISDKTIYFDSEIERLHYLVDNHFYFNVFKKYSEEDLIEIIEFAKSINFEFASYMSASKFYKDYALKTNDKSKYLEDYNQHVAIVALYLADGNKEQAKQFILAMIEQRYQPATPTFLNAGRARRGELVSCFLLEVDDSLNSINFIDSTAKQLSKIGGGVAINLSKLRARGEAIKGIKGVAKGVLPVAKALEGGFSYADQLGQRPGAGAVYLNIFHYDVEEFLDTKKVNADEDLRLSTISTGLIVPSKFFDLAKEGKDFYMFAPHTVKQEYGVTLDDIDIEKYYDELVANPNVLKKKKDAREMLNMIAQTQLQSGYPYLMFKDNANKVHANSNIGQIKMSNLCTEIFQLQETSIINDYGIEDEIKRDISCNLGSLNIVNVMETGKFRDSVHTGMDALTVVSDEANIQNAPGVKKANNELHSVGLGVMNLHGYLAKNKIGYESEEAKDFANIFFMMMNYYSIERSMEIAKERGEAYQDFDKSDYASGKYFDFYTSQEFVPQFEKVKELFANMHIPTSEDWKLLQQQVQEYGLYHAYRLAIAPTQSISYVQNATSSVMPIVDQIERRTYGNAETFYPMPFLSPETMWYYKSAFNTDQMKLIDLISTIQTHVDQGISTILYVNSEISTRELSRLYVYAHHKGLKSLYYTRNKLLSVEECTSCAI . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 128372 130477 . + . GCA_005502385.1_01373_mRNA GCA_005502385.1_01373 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKIMDEKKYNHIELNNEVTKRKDNGFFNLEKDQEALNVYLEEISDKTIYFDSEIERLHYLVDNHFYFNVFKKYSEEDLIEIIEFAKSINFEFASYMSASKFYKDYALKTNDKSKYLEDYNQHVAIVALYLADGNKEQAKQFILAMIEQRYQPATPTFLNAGRARRGELVSCFLLEVDDSLNSINFIDSTAKQLSKIGGGVAINLSKLRARGEAIKGIKGVAKGVLPVAKALEGGFSYADQLGQRPGAGAVYLNIFHYDVEEFLDTKKVNADEDLRLSTISTGLIVPSKFFDLAKEGKDFYMFAPHTVKQEYGVTLDDIDIEKYYDELVANPNVLKKKKDAREMLNMIAQTQLQSGYPYLMFKDNANKVHANSNIGQIKMSNLCTEIFQLQETSIINDYGIEDEIKRDISCNLGSLNIVNVMETGKFRDSVHTGMDALTVVSDEANIQNAPGVKKANNELHSVGLGVMNLHGYLAKNKIGYESEEAKDFANIFFMMMNYYSIERSMEIAKERGEAYQDFDKSDYASGKYFDFYTSQEFVPQFEKVKELFANMHIPTSEDWKLLQQQVQEYGLYHAYRLAIAPTQSISYVQNATSSVMPIVDQIERRTYGNAETFYPMPFLSPETMWYYKSAFNTDQMKLIDLISTIQTHVDQGISTILYVNSEISTRELSRLYVYAHHKGLKSLYYTRNKLLSVEECTSCAI . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 128372 130477 . + 0 GCA_005502385.1_01373 GCA_005502385.1_01373_gene,GCA_005502385.1_01373_mRNA GCA_005502385.1_01373 Ribonucleoside-diphosphate reductase subunit alpha GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKIMDEKKYNHIELNNEVTKRKDNGFFNLEKDQEALNVYLEEISDKTIYFDSEIERLHYLVDNHFYFNVFKKYSEEDLIEIIEFAKSINFEFASYMSASKFYKDYALKTNDKSKYLEDYNQHVAIVALYLADGNKEQAKQFILAMIEQRYQPATPTFLNAGRARRGELVSCFLLEVDDSLNSINFIDSTAKQLSKIGGGVAINLSKLRARGEAIKGIKGVAKGVLPVAKALEGGFSYADQLGQRPGAGAVYLNIFHYDVEEFLDTKKVNADEDLRLSTISTGLIVPSKFFDLAKEGKDFYMFAPHTVKQEYGVTLDDIDIEKYYDELVANPNVLKKKKDAREMLNMIAQTQLQSGYPYLMFKDNANKVHANSNIGQIKMSNLCTEIFQLQETSIINDYGIEDEIKRDISCNLGSLNIVNVMETGKFRDSVHTGMDALTVVSDEANIQNAPGVKKANNELHSVGLGVMNLHGYLAKNKIGYESEEAKDFANIFFMMMNYYSIERSMEIAKERGEAYQDFDKSDYASGKYFDFYTSQEFVPQFEKVKELFANMHIPTSEDWKLLQQQVQEYGLYHAYRLAIAPTQSISYVQNATSSVMPIVDQIERRTYGNAETFYPMPFLSPETMWYYKSAFNTDQMKLIDLISTIQTHVDQGISTILYVNSEISTRELSRLYVYAHHKGLKSLYYTRNKLLSVEECTSCAI persistent 701 nrdE class 1b ribonucleoside-diphosphate reductase subunit alpha 1.17.4.1 GO:0004748,GO:0005524,GO:0006260 COG0209,F WP_137689587.1 UPI0010F95359 UniRef100_UPI0010F95359,UniRef50_A0A240A193,UniRef90_A0AAE3D4Q3 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 130591 131559 . + . GCA_005502385.1_01374_gene GCA_005502385.1_01374 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKAVNWNTQEDMTNMFWRQNISQMWVETEFKVSKDIASWKTLTEDEKNTFKRALAGLTGLDTHQADDGMPLIMLHTTDLRKKAVYSFMQMMEQIHAKSYSHIFTTLLPSSETNYLLDTWVIEEPHLKYKSDKIISNYHKLWGKEASIFDQYMARVSSVFLETFLFYSGFYYPLYLAGQGKMTTSGEIIRKILLDESIHGVFTGLDAQSLRNELSENEKQKADKEMYKLLEELYKNEVSYTHMLYDDIGLTEDVLNYVQYNGNKALSNLGFEPYFEEKEFNPIIENALDTSTKNHDFFSVKGDGYTLALNVEALQDEDFIFED . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 130591 131559 . + . GCA_005502385.1_01374_mRNA GCA_005502385.1_01374 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKAVNWNTQEDMTNMFWRQNISQMWVETEFKVSKDIASWKTLTEDEKNTFKRALAGLTGLDTHQADDGMPLIMLHTTDLRKKAVYSFMQMMEQIHAKSYSHIFTTLLPSSETNYLLDTWVIEEPHLKYKSDKIISNYHKLWGKEASIFDQYMARVSSVFLETFLFYSGFYYPLYLAGQGKMTTSGEIIRKILLDESIHGVFTGLDAQSLRNELSENEKQKADKEMYKLLEELYKNEVSYTHMLYDDIGLTEDVLNYVQYNGNKALSNLGFEPYFEEKEFNPIIENALDTSTKNHDFFSVKGDGYTLALNVEALQDEDFIFED . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 130591 131559 . + 0 GCA_005502385.1_01374 GCA_005502385.1_01374_gene,GCA_005502385.1_01374_mRNA GCA_005502385.1_01374 Ribonucleoside-diphosphate reductase subunit beta GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKAVNWNTQEDMTNMFWRQNISQMWVETEFKVSKDIASWKTLTEDEKNTFKRALAGLTGLDTHQADDGMPLIMLHTTDLRKKAVYSFMQMMEQIHAKSYSHIFTTLLPSSETNYLLDTWVIEEPHLKYKSDKIISNYHKLWGKEASIFDQYMARVSSVFLETFLFYSGFYYPLYLAGQGKMTTSGEIIRKILLDESIHGVFTGLDAQSLRNELSENEKQKADKEMYKLLEELYKNEVSYTHMLYDDIGLTEDVLNYVQYNGNKALSNLGFEPYFEEKEFNPIIENALDTSTKNHDFFSVKGDGYTLALNVEALQDEDFIFED persistent 322 nrdF class 1b ribonucleoside-diphosphate reductase subunit beta 1.17.4.1 GO:0004748,GO:0005971,GO:0009263 COG0208,F WP_002455627.1 UPI0001EF53D6 UniRef100_A0A1L8Y4Q5,UniRef50_A0A1L8Y4Q5,UniRef90_A0A1L8Y4Q5 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 131744 132712 . + . GCA_005502385.1_01375_gene GCA_005502385.1_01375 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRFLFKGYTLLIILVILSILSLFIGVSQLSITDLFHLSDNQKNILFSSRIPRTISILLSGSSLALAGLVMQQMMQNKFVSPTTAGTMEWAKLGILLSLIFFPKGHILIKLTFAVALSLGGTFLFVKLINFIKVKEVIFVPLLGIMIGGIVSSFTTFIALRTNALQSINNWLNGNFAVITSGRYEILYLAIPLLIIAYIFANHFTIAGMGKDFSHNLGVKYEQIINIALLITATLTALVVVTVGTLPFLGLIVPNIISMYRGDHLKNALPHTLMLGSIFVLFSDIIGRLIVYPYEINIGLTIGVFGTIIFLVLLMKGRNNYAN . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 131744 132712 . + . GCA_005502385.1_01375_mRNA GCA_005502385.1_01375 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRFLFKGYTLLIILVILSILSLFIGVSQLSITDLFHLSDNQKNILFSSRIPRTISILLSGSSLALAGLVMQQMMQNKFVSPTTAGTMEWAKLGILLSLIFFPKGHILIKLTFAVALSLGGTFLFVKLINFIKVKEVIFVPLLGIMIGGIVSSFTTFIALRTNALQSINNWLNGNFAVITSGRYEILYLAIPLLIIAYIFANHFTIAGMGKDFSHNLGVKYEQIINIALLITATLTALVVVTVGTLPFLGLIVPNIISMYRGDHLKNALPHTLMLGSIFVLFSDIIGRLIVYPYEINIGLTIGVFGTIIFLVLLMKGRNNYAN . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 131744 132712 . + 0 GCA_005502385.1_01375 GCA_005502385.1_01375_gene,GCA_005502385.1_01375_mRNA GCA_005502385.1_01375 Petrobactin import system permease protein YclN GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRFLFKGYTLLIILVILSILSLFIGVSQLSITDLFHLSDNQKNILFSSRIPRTISILLSGSSLALAGLVMQQMMQNKFVSPTTAGTMEWAKLGILLSLIFFPKGHILIKLTFAVALSLGGTFLFVKLINFIKVKEVIFVPLLGIMIGGIVSSFTTFIALRTNALQSINNWLNGNFAVITSGRYEILYLAIPLLIIAYIFANHFTIAGMGKDFSHNLGVKYEQIINIALLITATLTALVVVTVGTLPFLGLIVPNIISMYRGDHLKNALPHTLMLGSIFVLFSDIIGRLIVYPYEINIGLTIGVFGTIIFLVLLMKGRNNYAN persistent 322 ABC transporter permease WP_017175943.1 UPI0002D6F674 UniRef100_A0A657ZQP9,UniRef50_P94418,UniRef90_A0A657ZQP9 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 132702 133661 . + . GCA_005502385.1_01376_gene GCA_005502385.1_01376 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MQISANKKILILFLFTICMAAFYLLVGLDFEIFQYQFESRIRKLVLILLVGGSISTAVVIFQSITANRLLTPSIMGLDSVYLFIKVLPVFLLGTQASVVTNTYLNFLLTLVVMVLFSLVLFQGMFKLGHFSVYFILLVGVVLGTFFRSITGFIQLIMNPDDFLTVQSAMFASFDASNSKLVLISSILLIILIVIAFILRPYLDVLLLGKDQSINLGVSYEKMTKLLLILVALLVSISTALVGPVTFLGLLTVNLAHEFMKTYEHKYILPATILISWISLFIAQWIIENMFKATTEFSLIIDLVGGIYFIYLLIKRRNED . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 132702 133661 . + . GCA_005502385.1_01376_mRNA GCA_005502385.1_01376 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MQISANKKILILFLFTICMAAFYLLVGLDFEIFQYQFESRIRKLVLILLVGGSISTAVVIFQSITANRLLTPSIMGLDSVYLFIKVLPVFLLGTQASVVTNTYLNFLLTLVVMVLFSLVLFQGMFKLGHFSVYFILLVGVVLGTFFRSITGFIQLIMNPDDFLTVQSAMFASFDASNSKLVLISSILLIILIVIAFILRPYLDVLLLGKDQSINLGVSYEKMTKLLLILVALLVSISTALVGPVTFLGLLTVNLAHEFMKTYEHKYILPATILISWISLFIAQWIIENMFKATTEFSLIIDLVGGIYFIYLLIKRRNED . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 132702 133661 . + 0 GCA_005502385.1_01376 GCA_005502385.1_01376_gene,GCA_005502385.1_01376_mRNA GCA_005502385.1_01376 Petrobactin import system permease protein YclO GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MQISANKKILILFLFTICMAAFYLLVGLDFEIFQYQFESRIRKLVLILLVGGSISTAVVIFQSITANRLLTPSIMGLDSVYLFIKVLPVFLLGTQASVVTNTYLNFLLTLVVMVLFSLVLFQGMFKLGHFSVYFILLVGVVLGTFFRSITGFIQLIMNPDDFLTVQSAMFASFDASNSKLVLISSILLIILIVIAFILRPYLDVLLLGKDQSINLGVSYEKMTKLLLILVALLVSISTALVGPVTFLGLLTVNLAHEFMKTYEHKYILPATILISWISLFIAQWIIENMFKATTEFSLIIDLVGGIYFIYLLIKRRNED persistent 319 Iron chelate uptake ABC transporter family permease subunit WP_002449066.1 UPI00019FC0CB UniRef100_A0A2A1MER5,UniRef50_W8TNI3,UniRef90_A0A8X8KIE8 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 133658 134428 . + . GCA_005502385.1_01377_gene GCA_005502385.1_01377 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIQIRNLDKKIQSKSILKDINVDIQKGKLTSLIGPNGAGKSTLLSAVSRLFEYQNGTINIENKLIDDYKSDELAKKLSILKQTNHTDMNITVEQLVNFGRFPYSKGRMKKEDHEKVAYAIDLLHLREIKDRNIKTLSGGQRQRAYIAMTIAQDTEYILLDEPLNNLDMKHSVQIMQILRTLCRDLNKTIVIVLHDINFASCYSDYIVALKKGEIVKSGPKDSIIETNVLRDLYEMDVHVEEIRGQRICLYYDEVIF . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 133658 134428 . + . GCA_005502385.1_01377_mRNA GCA_005502385.1_01377 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIQIRNLDKKIQSKSILKDINVDIQKGKLTSLIGPNGAGKSTLLSAVSRLFEYQNGTINIENKLIDDYKSDELAKKLSILKQTNHTDMNITVEQLVNFGRFPYSKGRMKKEDHEKVAYAIDLLHLREIKDRNIKTLSGGQRQRAYIAMTIAQDTEYILLDEPLNNLDMKHSVQIMQILRTLCRDLNKTIVIVLHDINFASCYSDYIVALKKGEIVKSGPKDSIIETNVLRDLYEMDVHVEEIRGQRICLYYDEVIF . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 133658 134428 . + 0 GCA_005502385.1_01377 GCA_005502385.1_01377_gene,GCA_005502385.1_01377_mRNA GCA_005502385.1_01377 Petrobactin import ATP-binding protein YclP GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIQIRNLDKKIQSKSILKDINVDIQKGKLTSLIGPNGAGKSTLLSAVSRLFEYQNGTINIENKLIDDYKSDELAKKLSILKQTNHTDMNITVEQLVNFGRFPYSKGRMKKEDHEKVAYAIDLLHLREIKDRNIKTLSGGQRQRAYIAMTIAQDTEYILLDEPLNNLDMKHSVQIMQILRTLCRDLNKTIVIVLHDINFASCYSDYIVALKKGEIVKSGPKDSIIETNVLRDLYEMDVHVEEIRGQRICLYYDEVIF persistent 256 ATP-binding cassette domain-containing protein WP_017175941.1 UPI0002F82C16 UniRef100_A0A1L8Y4N8,UniRef50_Q81XB3,UniRef90_A0A1L8Y4N8 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 134535 135569 . + . GCA_005502385.1_01378_gene GCA_005502385.1_01378 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKTVLFLVLTLALVLSACSNNSGNKSNNENDSKDTVSIKNSFSASGNDESSNEDKKISNTVKVPKNPKNAVVLDYGALDVLKEMGVADKVKGLPKGENNESLPSFLSEFKKDKYINTGNLKEINFDKIAEAKPDVIYISSRAATQKNLDEFKKAAPKAKVVYVGASEDHYIKDMKKNTENLGKIYNKEDKAKDMNTKLDQKISDMKKQTKNFDKSVMYLLVNEGELSTFGPGGRFGDLVFNTLGFKPADKHVKISPHGQNINNEYISNHDPDIILAMDRGSVVGGKSTAKQVLKNDVIKDVTAVKNNNVYELDPKLWYFASGSTTTTVKQIDELEKVIDKTKK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 134535 135569 . + . GCA_005502385.1_01378_mRNA GCA_005502385.1_01378 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKTVLFLVLTLALVLSACSNNSGNKSNNENDSKDTVSIKNSFSASGNDESSNEDKKISNTVKVPKNPKNAVVLDYGALDVLKEMGVADKVKGLPKGENNESLPSFLSEFKKDKYINTGNLKEINFDKIAEAKPDVIYISSRAATQKNLDEFKKAAPKAKVVYVGASEDHYIKDMKKNTENLGKIYNKEDKAKDMNTKLDQKISDMKKQTKNFDKSVMYLLVNEGELSTFGPGGRFGDLVFNTLGFKPADKHVKISPHGQNINNEYISNHDPDIILAMDRGSVVGGKSTAKQVLKNDVIKDVTAVKNNNVYELDPKLWYFASGSTTTTVKQIDELEKVIDKTKK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 134535 135569 . + 0 GCA_005502385.1_01378 GCA_005502385.1_01378_gene,GCA_005502385.1_01378_mRNA GCA_005502385.1_01378 Petrobactin-binding protein YclQ GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKTVLFLVLTLALVLSACSNNSGNKSNNENDSKDTVSIKNSFSASGNDESSNEDKKISNTVKVPKNPKNAVVLDYGALDVLKEMGVADKVKGLPKGENNESLPSFLSEFKKDKYINTGNLKEINFDKIAEAKPDVIYISSRAATQKNLDEFKKAAPKAKVVYVGASEDHYIKDMKKNTENLGKIYNKEDKAKDMNTKLDQKISDMKKQTKNFDKSVMYLLVNEGELSTFGPGGRFGDLVFNTLGFKPADKHVKISPHGQNINNEYISNHDPDIILAMDRGSVVGGKSTAKQVLKNDVIKDVTAVKNNNVYELDPKLWYFASGSTTTTVKQIDELEKVIDKTKK persistent 344 Iron ABC transporter substrate-binding protein WP_048761397.1 UPI0006600AD8 UniRef100_UPI0008FB3457,UniRef50_A0A239ZZP9,UniRef90_A0AAE5JIA7 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 135812 136126 . - . GCA_005502385.1_01379_gene GCA_005502385.1_01379 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLKVYGSLVDNETRCIHYHTFLDIIAIKFKCCEKYYPCYQCHNEHESHNIQRWSAEEFHKKAILCGVCQNELSIHEYMMTETCPNCQAHFNSRCKFHYHLYFEI . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 135812 136126 . - . GCA_005502385.1_01379_mRNA GCA_005502385.1_01379 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLKVYGSLVDNETRCIHYHTFLDIIAIKFKCCEKYYPCYQCHNEHESHNIQRWSAEEFHKKAILCGVCQNELSIHEYMMTETCPNCQAHFNSRCKFHYHLYFEI . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 135812 136126 . - 0 GCA_005502385.1_01379 GCA_005502385.1_01379_gene,GCA_005502385.1_01379_mRNA GCA_005502385.1_01379 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLKVYGSLVDNETRCIHYHTFLDIIAIKFKCCEKYYPCYQCHNEHESHNIQRWSAEEFHKKAILCGVCQNELSIHEYMMTETCPNCQAHFNSRCKFHYHLYFEI persistent 104 CHY-type domain-containing protein WP_017175939.1 UPI00030A9A43 UniRef100_A0A1L8Y4N5,UniRef50_A0A166MHJ2,UniRef90_A0A6N0I3C7 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 136154 137080 . - . GCA_005502385.1_01380_gene GCA_005502385.1_01380 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLEQEDILKDLKSLVPDNIIKVNEPLKRYTYTKTGGNADFYLSPTENEQVQTIVRYAHEHQLPVTYLGNGSNIIIREGGIRGIVISLLSLNHINVSDDAIIAGSGAAIIDVSRAARDHVLTGLEFACGIPGSVGGAVYMNAGAYGGEIKDCIDYALCVNEHGDLIQLTKEQLHLDYRNSVVQKQHLVVLEAAFTLEPGNLNEIQAKMDDLTERRESKQPLEYPSCGSVFQRPPGHFAGKLIQDSNLQGHRIGGVEVSTKHAGFMVNVDNGTATDYENLIHHVQKVVKEKFDVELHREVRIIGEYPESE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 136154 137080 . - . GCA_005502385.1_01380_mRNA GCA_005502385.1_01380 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLEQEDILKDLKSLVPDNIIKVNEPLKRYTYTKTGGNADFYLSPTENEQVQTIVRYAHEHQLPVTYLGNGSNIIIREGGIRGIVISLLSLNHINVSDDAIIAGSGAAIIDVSRAARDHVLTGLEFACGIPGSVGGAVYMNAGAYGGEIKDCIDYALCVNEHGDLIQLTKEQLHLDYRNSVVQKQHLVVLEAAFTLEPGNLNEIQAKMDDLTERRESKQPLEYPSCGSVFQRPPGHFAGKLIQDSNLQGHRIGGVEVSTKHAGFMVNVDNGTATDYENLIHHVQKVVKEKFDVELHREVRIIGEYPESE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 136154 137080 . - 0 GCA_005502385.1_01380 GCA_005502385.1_01380_gene,GCA_005502385.1_01380_mRNA GCA_005502385.1_01380 UDP-N-acetylenolpyruvoylglucosamine reductase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLEQEDILKDLKSLVPDNIIKVNEPLKRYTYTKTGGNADFYLSPTENEQVQTIVRYAHEHQLPVTYLGNGSNIIIREGGIRGIVISLLSLNHINVSDDAIIAGSGAAIIDVSRAARDHVLTGLEFACGIPGSVGGAVYMNAGAYGGEIKDCIDYALCVNEHGDLIQLTKEQLHLDYRNSVVQKQHLVVLEAAFTLEPGNLNEIQAKMDDLTERRESKQPLEYPSCGSVFQRPPGHFAGKLIQDSNLQGHRIGGVEVSTKHAGFMVNVDNGTATDYENLIHHVQKVVKEKFDVELHREVRIIGEYPESE persistent 308 murB UDP-N-acetylmuramate dehydrogenase 1.3.1.98 GO:0008762,GO:0071949 WP_017175938.1 UPI0002ED66F9 UniRef100_A0A4V2KX81,UniRef50_Q5M396,UniRef90_A0A4V2KX81 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 137174 137689 . - . GCA_005502385.1_01381_gene GCA_005502385.1_01381 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MYASVQSFINCSNGNDYHQLYEDTKALLFNLLDSPVKFTQHIGGTKHFSYPTEPILDVLVGVNNLHDITSLDEKRLNYVGFYRLHHPYKKKVMMAKFDNMINLKQIIRLHIIQIDTPLFTQYLAIDHVLSTQKHVAQMFSNQKNKFINLNSTIRYYENQKQKFFDNLYHTL . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 137174 137689 . - . GCA_005502385.1_01381_mRNA GCA_005502385.1_01381 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MYASVQSFINCSNGNDYHQLYEDTKALLFNLLDSPVKFTQHIGGTKHFSYPTEPILDVLVGVNNLHDITSLDEKRLNYVGFYRLHHPYKKKVMMAKFDNMINLKQIIRLHIIQIDTPLFTQYLAIDHVLSTQKHVAQMFSNQKNKFINLNSTIRYYENQKQKFFDNLYHTL . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 137174 137689 . - 0 GCA_005502385.1_01381 GCA_005502385.1_01381_gene,GCA_005502385.1_01381_mRNA GCA_005502385.1_01381 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MYASVQSFINCSNGNDYHQLYEDTKALLFNLLDSPVKFTQHIGGTKHFSYPTEPILDVLVGVNNLHDITSLDEKRLNYVGFYRLHHPYKKKVMMAKFDNMINLKQIIRLHIIQIDTPLFTQYLAIDHVLSTQKHVAQMFSNQKNKFINLNSTIRYYENQKQKFFDNLYHTL persistent 171 grpB GrpB family protein WP_017175937.1 UPI0002D52830 UniRef100_A0A4Q9WQP8,UniRef50_Q5HQZ0,UniRef90_A0A974QN91 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 137797 138675 . + . GCA_005502385.1_01382_gene GCA_005502385.1_01382 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKLIILSLCSLYCLILSGCGQNNNEDLNRFKQHLSKVETKQKSVEKVMNQLELNRLNDISKTDTTDKNKKSFERLQKNINHRLVPEFKEYEKEAKHLPAKTNKTRQLKKDYLNHVSNQHQSINEIKSFVDLYNQSVVENEKILNYTHSFEINRALVEKDIRKTNNQENAHLLKSKIENNNRNLRKTAQKYLEKDNYPTSKAINEHIKPLIQKQIKDLNQTNITDSHLNNARKNAIEMYYNLLDYYETRETTIKIEDQLSKINVEKLPKTGKDLSKGNYNFNTELEKVQQNE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 137797 138675 . + . GCA_005502385.1_01382_mRNA GCA_005502385.1_01382 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKLIILSLCSLYCLILSGCGQNNNEDLNRFKQHLSKVETKQKSVEKVMNQLELNRLNDISKTDTTDKNKKSFERLQKNINHRLVPEFKEYEKEAKHLPAKTNKTRQLKKDYLNHVSNQHQSINEIKSFVDLYNQSVVENEKILNYTHSFEINRALVEKDIRKTNNQENAHLLKSKIENNNRNLRKTAQKYLEKDNYPTSKAINEHIKPLIQKQIKDLNQTNITDSHLNNARKNAIEMYYNLLDYYETRETTIKIEDQLSKINVEKLPKTGKDLSKGNYNFNTELEKVQQNE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 137797 138675 . + 0 GCA_005502385.1_01382 GCA_005502385.1_01382_gene,GCA_005502385.1_01382_mRNA GCA_005502385.1_01382 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKLIILSLCSLYCLILSGCGQNNNEDLNRFKQHLSKVETKQKSVEKVMNQLELNRLNDISKTDTTDKNKKSFERLQKNINHRLVPEFKEYEKEAKHLPAKTNKTRQLKKDYLNHVSNQHQSINEIKSFVDLYNQSVVENEKILNYTHSFEINRALVEKDIRKTNNQENAHLLKSKIENNNRNLRKTAQKYLEKDNYPTSKAINEHIKPLIQKQIKDLNQTNITDSHLNNARKNAIEMYYNLLDYYETRETTIKIEDQLSKINVEKLPKTGKDLSKGNYNFNTELEKVQQNE persistent 292 EMYY motif lipoprotein WP_019834939.1 UPI00035FA6EF UniRef100_UPI001389B6D3,UniRef50_A0A853V5W4,UniRef90_A0AAE5MXY3 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 138790 139110 . + . GCA_005502385.1_01383_gene GCA_005502385.1_01383 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAIKLSSIDQFEQVLEEHNDVFVLKHSDTCPISAAAFDQFNKFLYERDIDGYYLVVQEERKLSDYIAEKTNVKHESPQAFYFVDGKAVWNASHSDINVSTLAQAEE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 138790 139110 . + . GCA_005502385.1_01383_mRNA GCA_005502385.1_01383 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAIKLSSIDQFEQVLEEHNDVFVLKHSDTCPISAAAFDQFNKFLYERDIDGYYLVVQEERKLSDYIAEKTNVKHESPQAFYFVDGKAVWNASHSDINVSTLAQAEE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 138790 139110 . + 0 GCA_005502385.1_01383 GCA_005502385.1_01383_gene,GCA_005502385.1_01383_mRNA GCA_005502385.1_01383 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAIKLSSIDQFEQVLEEHNDVFVLKHSDTCPISAAAFDQFNKFLYERDIDGYYLVVQEERKLSDYIAEKTNVKHESPQAFYFVDGKAVWNASHSDINVSTLAQAEE persistent 106 ytxJ Bacillithiol system redox-active protein YtxJ WP_002449093.1 UPI00019FC0D1 UniRef100_A0A1L8Y4P5,UniRef50_Q2G066,UniRef90_A0A1L8Y4P5 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 139315 140439 . + . GCA_005502385.1_01384_gene GCA_005502385.1_01384 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKILVAMDEFNGIISSYQANRYVEEAIASQIDQADIVQVPLFNGRHELLNSVFLWQSGTKYKVNVHDADMNEIETIYGQTEEGTIIIESNLFSKGNKAIEQRTSFGLGEVILDALNKDTDHIIISLGGMDSFDGGVGMLQALGAKFYDDENRELDAREGAQMIKFIRHIDISGLPSTLENVRLQVMTDFSSKLYGKNSEIMKLSYNHQIPHKKAVEIDNLMWYLNEIMKNELHIALGSIERGGAGGGIAAVLKALYNTEILTSHELVNQITHLDELVSQADLIIFGEGLKEEDHMLETTTLTIAELTEKYHKPSIAICATNDKFDIFNHHRVTAMFNTFIEMPKTYTDFKMGLQIRHYTVQALRLLKTTANGIK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 139315 140439 . + . GCA_005502385.1_01384_mRNA GCA_005502385.1_01384 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKILVAMDEFNGIISSYQANRYVEEAIASQIDQADIVQVPLFNGRHELLNSVFLWQSGTKYKVNVHDADMNEIETIYGQTEEGTIIIESNLFSKGNKAIEQRTSFGLGEVILDALNKDTDHIIISLGGMDSFDGGVGMLQALGAKFYDDENRELDAREGAQMIKFIRHIDISGLPSTLENVRLQVMTDFSSKLYGKNSEIMKLSYNHQIPHKKAVEIDNLMWYLNEIMKNELHIALGSIERGGAGGGIAAVLKALYNTEILTSHELVNQITHLDELVSQADLIIFGEGLKEEDHMLETTTLTIAELTEKYHKPSIAICATNDKFDIFNHHRVTAMFNTFIEMPKTYTDFKMGLQIRHYTVQALRLLKTTANGIK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 139315 140439 . + 0 GCA_005502385.1_01384 GCA_005502385.1_01384_gene,GCA_005502385.1_01384_mRNA GCA_005502385.1_01384 Glycerate 2-kinase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKILVAMDEFNGIISSYQANRYVEEAIASQIDQADIVQVPLFNGRHELLNSVFLWQSGTKYKVNVHDADMNEIETIYGQTEEGTIIIESNLFSKGNKAIEQRTSFGLGEVILDALNKDTDHIIISLGGMDSFDGGVGMLQALGAKFYDDENRELDAREGAQMIKFIRHIDISGLPSTLENVRLQVMTDFSSKLYGKNSEIMKLSYNHQIPHKKAVEIDNLMWYLNEIMKNELHIALGSIERGGAGGGIAAVLKALYNTEILTSHELVNQITHLDELVSQADLIIFGEGLKEEDHMLETTTLTIAELTEKYHKPSIAICATNDKFDIFNHHRVTAMFNTFIEMPKTYTDFKMGLQIRHYTVQALRLLKTTANGIK persistent 374 Glycerate kinase 2.7.1.165 WP_048681296.1 UPI00065F9BAA UniRef100_UPI00065F9BAA,UniRef50_A0A6N3ELY9,UniRef90_A0A6N0I3D7 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 140485 141714 . - . GCA_005502385.1_01385_gene GCA_005502385.1_01385 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKVQIIDRLSRYVKIDTQSNPESKSTPSTEKQWDLLHLLQKELQNFGLEIELDNNGYLFATLESNIEKEVPTVGFLAHVDTSPDFNATNVNPQIIEDYDGQPIKLGQTNRVLSQDVFPELKKLEGHTLMITDGTSLLGADDKAGVVEIMEAVKYLQTHPEIKHGRIRIAFTPDEEIGRGPHKFNVKRFNADFAYTMDGSEFGELQFESFNAAEATITTHGVNVHPGSAKNVMVNAIGLAHQFHSLLPANEVPERTEGYEGFYHLMKIEGTVEKASLQYIIRDHDRKSFELKKKKLLEIRDDINIHYEGYPVKVDIEDQYYNMAEQIKPHPYIIDIPKKVFADLEIKPNTAPIRGGTDGSQLSFKGLPTPNIFTGCGNFHGPFEYASIDVMEKAVQVIIGIAQEVTQYEK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 140485 141714 . - . GCA_005502385.1_01385_mRNA GCA_005502385.1_01385 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKVQIIDRLSRYVKIDTQSNPESKSTPSTEKQWDLLHLLQKELQNFGLEIELDNNGYLFATLESNIEKEVPTVGFLAHVDTSPDFNATNVNPQIIEDYDGQPIKLGQTNRVLSQDVFPELKKLEGHTLMITDGTSLLGADDKAGVVEIMEAVKYLQTHPEIKHGRIRIAFTPDEEIGRGPHKFNVKRFNADFAYTMDGSEFGELQFESFNAAEATITTHGVNVHPGSAKNVMVNAIGLAHQFHSLLPANEVPERTEGYEGFYHLMKIEGTVEKASLQYIIRDHDRKSFELKKKKLLEIRDDINIHYEGYPVKVDIEDQYYNMAEQIKPHPYIIDIPKKVFADLEIKPNTAPIRGGTDGSQLSFKGLPTPNIFTGCGNFHGPFEYASIDVMEKAVQVIIGIAQEVTQYEK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 140485 141714 . - 0 GCA_005502385.1_01385 GCA_005502385.1_01385_gene,GCA_005502385.1_01385_mRNA GCA_005502385.1_01385 Peptidase T GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKVQIIDRLSRYVKIDTQSNPESKSTPSTEKQWDLLHLLQKELQNFGLEIELDNNGYLFATLESNIEKEVPTVGFLAHVDTSPDFNATNVNPQIIEDYDGQPIKLGQTNRVLSQDVFPELKKLEGHTLMITDGTSLLGADDKAGVVEIMEAVKYLQTHPEIKHGRIRIAFTPDEEIGRGPHKFNVKRFNADFAYTMDGSEFGELQFESFNAAEATITTHGVNVHPGSAKNVMVNAIGLAHQFHSLLPANEVPERTEGYEGFYHLMKIEGTVEKASLQYIIRDHDRKSFELKKKKLLEIRDDINIHYEGYPVKVDIEDQYYNMAEQIKPHPYIIDIPKKVFADLEIKPNTAPIRGGTDGSQLSFKGLPTPNIFTGCGNFHGPFEYASIDVMEKAVQVIIGIAQEVTQYEK persistent 409 pepT peptidase T 3.4.11.4 GO:0006508,GO:0008270,GO:0045148 WP_048681299.1 UPI000660641D UniRef100_UPI000660641D,UniRef50_Q89YZ7,UniRef90_A0A2S5X1E7 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 141729 142223 . - . GCA_005502385.1_01386_gene GCA_005502385.1_01386 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLFYLFHFVISFISTVLFSIIFNAPKRLLLACGFVGALAWTIYQYTVDMDLGKVGAAFLGSLILGLLSHVMSRRYKRPVIIFIVPGIIPLVPGGTAYEATRFLVSNDYTHAVNTFLEVTLISGSIAFGILVAEILYYIYTRIKQFYGKIKGKTYRKSYNMNNRV . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 141729 142223 . - . GCA_005502385.1_01386_mRNA GCA_005502385.1_01386 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLFYLFHFVISFISTVLFSIIFNAPKRLLLACGFVGALAWTIYQYTVDMDLGKVGAAFLGSLILGLLSHVMSRRYKRPVIIFIVPGIIPLVPGGTAYEATRFLVSNDYTHAVNTFLEVTLISGSIAFGILVAEILYYIYTRIKQFYGKIKGKTYRKSYNMNNRV . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 141729 142223 . - 0 GCA_005502385.1_01386 GCA_005502385.1_01386_gene,GCA_005502385.1_01386_mRNA GCA_005502385.1_01386 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLFYLFHFVISFISTVLFSIIFNAPKRLLLACGFVGALAWTIYQYTVDMDLGKVGAAFLGSLILGLLSHVMSRRYKRPVIIFIVPGIIPLVPGGTAYEATRFLVSNDYTHAVNTFLEVTLISGSIAFGILVAEILYYIYTRIKQFYGKIKGKTYRKSYNMNNRV persistent 164 yjjB Threonine/Serine exporter ThrE domain-containing protein C,COG3610 WP_002448047.1 UPI00019FC428 UniRef100_A0A1L8Y584,UniRef50_Q2G063,UniRef90_A0A653Z4F8 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 142240 143001 . - . GCA_005502385.1_01387_gene GCA_005502385.1_01387 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNNSITIIDENKVIDVVLIAGRILLESGAETYRVEDTMNRIAHSYGLNDTYSFVTSTAIIFSLNDRTNTRLIRIRDRTTDLEKIALTNSLSRKIAKNELTIDEAKSELIHLSKASLQYSFLLNFFAAAIACGFFLLMFGGVVSDCWIAILAGGAAFLTFSFVQRFIQIKFFSEFVASAVVITIAVTFTKLGIATNQNIITISSVMPLVPGILICNAIRDLMAGELLAGMSRGVEAALTSFAIGAGVAIVLLIL . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 142240 143001 . - . GCA_005502385.1_01387_mRNA GCA_005502385.1_01387 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNNSITIIDENKVIDVVLIAGRILLESGAETYRVEDTMNRIAHSYGLNDTYSFVTSTAIIFSLNDRTNTRLIRIRDRTTDLEKIALTNSLSRKIAKNELTIDEAKSELIHLSKASLQYSFLLNFFAAAIACGFFLLMFGGVVSDCWIAILAGGAAFLTFSFVQRFIQIKFFSEFVASAVVITIAVTFTKLGIATNQNIITISSVMPLVPGILICNAIRDLMAGELLAGMSRGVEAALTSFAIGAGVAIVLLIL . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 142240 143001 . - 0 GCA_005502385.1_01387 GCA_005502385.1_01387_gene,GCA_005502385.1_01387_mRNA GCA_005502385.1_01387 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNNSITIIDENKVIDVVLIAGRILLESGAETYRVEDTMNRIAHSYGLNDTYSFVTSTAIIFSLNDRTNTRLIRIRDRTTDLEKIALTNSLSRKIAKNELTIDEAKSELIHLSKASLQYSFLLNFFAAAIACGFFLLMFGGVVSDCWIAILAGGAAFLTFSFVQRFIQIKFFSEFVASAVVITIAVTFTKLGIATNQNIITISSVMPLVPGILICNAIRDLMAGELLAGMSRGVEAALTSFAIGAGVAIVLLIL persistent 253 Threonine/serine exporter-like N-terminal domain-containing protein WP_002448186.1 UPI00019FC429 UniRef100_A0A2S5X1I0,UniRef50_A0A853V662,UniRef90_A0A2S5X1I0 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 143209 144279 . - . GCA_005502385.1_01388_gene GCA_005502385.1_01388 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIEAIIYNIAVMVAGIYLFHRLQYSENKIMIFSKGYVTILMTLVALLLTAYPIPFHHQYLIRLTFVPLLFLGRYTNVGYTFIASLIISLVDIFLFGNSFFYGVVLIIIGIIVSLIGPFLKKNDIIALIILNAISIVIIFVLSIFTTLYDLTELIMLIPISFVLTITSAITFVDIWHFFSLVTRYENEDKYDYLTGLGNVKEFDRHLNKISQKAEIEHTSLALLLVDIDGFKDVNDTYTHKAGDAVLKQMSQLLKNYVPHQFKIFRNGGEEFSIVIFDYSLDQSVKLAENIRMAVEKSSFHLPNKEVIKLSVSIGVGYLSQDEYKSQRKVFKDADDMVHVAKKEGRNQVMFNPIIKL . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 143209 144279 . - . GCA_005502385.1_01388_mRNA GCA_005502385.1_01388 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIEAIIYNIAVMVAGIYLFHRLQYSENKIMIFSKGYVTILMTLVALLLTAYPIPFHHQYLIRLTFVPLLFLGRYTNVGYTFIASLIISLVDIFLFGNSFFYGVVLIIIGIIVSLIGPFLKKNDIIALIILNAISIVIIFVLSIFTTLYDLTELIMLIPISFVLTITSAITFVDIWHFFSLVTRYENEDKYDYLTGLGNVKEFDRHLNKISQKAEIEHTSLALLLVDIDGFKDVNDTYTHKAGDAVLKQMSQLLKNYVPHQFKIFRNGGEEFSIVIFDYSLDQSVKLAENIRMAVEKSSFHLPNKEVIKLSVSIGVGYLSQDEYKSQRKVFKDADDMVHVAKKEGRNQVMFNPIIKL . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 143209 144279 . - 0 GCA_005502385.1_01388 GCA_005502385.1_01388_gene,GCA_005502385.1_01388_mRNA GCA_005502385.1_01388 hypothetical protein """""" GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIEAIIYNIAVMVAGIYLFHRLQYSENKIMIFSKGYVTILMTLVALLLTAYPIPFHHQYLIRLTFVPLLFLGRYTNVGYTFIASLIISLVDIFLFGNSFFYGVVLIIIGIIVSLIGPFLKKNDIIALIILNAISIVIIFVLSIFTTLYDLTELIMLIPISFVLTITSAITFVDIWHFFSLVTRYENEDKYDYLTGLGNVKEFDRHLNKISQKAEIEHTSLALLLVDIDGFKDVNDTYTHKAGDAVLKQMSQLLKNYVPHQFKIFRNGGEEFSIVIFDYSLDQSVKLAENIRMAVEKSSFHLPNKEVIKLSVSIGVGYLSQDEYKSQRKVFKDADDMVHVAKKEGRNQVMFNPIIKL persistent 356 GGDEF domain-containing protein WP_017175933.1 UPI0002EB3D82 UniRef100_A0A1L8Y595,UniRef50_Q5HQY3,UniRef90_A0A974KX13 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 144652 145725 . + . GCA_005502385.1_01389_gene GCA_005502385.1_01389 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MYTLLLIVVTLVISLIITPIIIKVSFKFNLVDRPNYRKVHTKPVSVMGGTVILLSFLIGLWLGHPIERAVKPLVIGLIIMYFVGIIDDIYDLKPILKLIGQIIAASVVVFYGITIDFISFPIGPTIHFGILSIPITIIWIVAITNAINLIDGLDGLASGVSVIGLTTIGFIAILQGNVFIIMICSLLIGALLGFLFFNFHPASIFLGDSGALMIGFIIGFLSLLGFKNITFISLFFPIVILAVPFIDTLFAMIRRVRNGQHIMQADKSHLHHKLLALGYTHRQTVLLIYSIAIMFSLSSIILYLSQPLGVLLMFILIVITIELIVEFTGLIDDSYRPILNLISKKNDDASRHKTNHK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 144652 145725 . + . GCA_005502385.1_01389_mRNA GCA_005502385.1_01389 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MYTLLLIVVTLVISLIITPIIIKVSFKFNLVDRPNYRKVHTKPVSVMGGTVILLSFLIGLWLGHPIERAVKPLVIGLIIMYFVGIIDDIYDLKPILKLIGQIIAASVVVFYGITIDFISFPIGPTIHFGILSIPITIIWIVAITNAINLIDGLDGLASGVSVIGLTTIGFIAILQGNVFIIMICSLLIGALLGFLFFNFHPASIFLGDSGALMIGFIIGFLSLLGFKNITFISLFFPIVILAVPFIDTLFAMIRRVRNGQHIMQADKSHLHHKLLALGYTHRQTVLLIYSIAIMFSLSSIILYLSQPLGVLLMFILIVITIELIVEFTGLIDDSYRPILNLISKKNDDASRHKTNHK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 144652 145725 . + 0 GCA_005502385.1_01389 GCA_005502385.1_01389_gene,GCA_005502385.1_01389_mRNA GCA_005502385.1_01389 putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MYTLLLIVVTLVISLIITPIIIKVSFKFNLVDRPNYRKVHTKPVSVMGGTVILLSFLIGLWLGHPIERAVKPLVIGLIIMYFVGIIDDIYDLKPILKLIGQIIAASVVVFYGITIDFISFPIGPTIHFGILSIPITIIWIVAITNAINLIDGLDGLASGVSVIGLTTIGFIAILQGNVFIIMICSLLIGALLGFLFFNFHPASIFLGDSGALMIGFIIGFLSLLGFKNITFISLFFPIVILAVPFIDTLFAMIRRVRNGQHIMQADKSHLHHKLLALGYTHRQTVLLIYSIAIMFSLSSIILYLSQPLGVLLMFILIVITIELIVEFTGLIDDSYRPILNLISKKNDDASRHKTNHK persistent 357 Undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase 2.7.8.33,2.7.8.35 WP_017175932.1 UPI0002FD63E0 UniRef100_A0A4Q9WRK6,UniRef50_A0A380GAZ8,UniRef90_A0A974KX84 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 145790 146431 . - . GCA_005502385.1_01390_gene GCA_005502385.1_01390 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSDHVITIKKEHIIENTINKSRFIAHIKPVFSEEEAKMFIEEVKQTHKEATHNCSAYTVGNQMNIQKANDDGEPTGTAGIPMLEILKKLDIHNACVVVTRYFGGIKLGGGGLIRAYSGAVRDVIYDIGRVELRNAIPTTVTINYDLTGKFEYELASTSFFLRDKVYTDKVSYKIDVVETEYDSFIEFLNRNTASQYDLEKDTPKQLPFDIETN . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 145790 146431 . - . GCA_005502385.1_01390_mRNA GCA_005502385.1_01390 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSDHVITIKKEHIIENTINKSRFIAHIKPVFSEEEAKMFIEEVKQTHKEATHNCSAYTVGNQMNIQKANDDGEPTGTAGIPMLEILKKLDIHNACVVVTRYFGGIKLGGGGLIRAYSGAVRDVIYDIGRVELRNAIPTTVTINYDLTGKFEYELASTSFFLRDKVYTDKVSYKIDVVETEYDSFIEFLNRNTASQYDLEKDTPKQLPFDIETN . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 145790 146431 . - 0 GCA_005502385.1_01390 GCA_005502385.1_01390_gene,GCA_005502385.1_01390_mRNA GCA_005502385.1_01390 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSDHVITIKKEHIIENTINKSRFIAHIKPVFSEEEAKMFIEEVKQTHKEATHNCSAYTVGNQMNIQKANDDGEPTGTAGIPMLEILKKLDIHNACVVVTRYFGGIKLGGGGLIRAYSGAVRDVIYDIGRVELRNAIPTTVTINYDLTGKFEYELASTSFFLRDKVYTDKVSYKIDVVETEYDSFIEFLNRNTASQYDLEKDTPKQLPFDIETN persistent 213 yigZ YigZ family protein WP_017175931.1 UPI0002DB067D UniRef100_A0A1L8Y588,UniRef50_Q2G059,UniRef90_A0A1L8Y588 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 146572 147438 . + . GCA_005502385.1_01391_gene GCA_005502385.1_01391 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKIAVMTDSTANLPKHIIEKYQIPVAPLSVTFDDGETFTEHPDLSKESFYKKMAASKTIPTTSQPAIGEWIKNYEELRDKGYTDVIVFNLSSGISGSYQSATQAGEMVDGIQVHTFDTRLASMIEGSYVIYTLKLIEDGATPNEIIDELTSIRKDTGAYLFVDDLKNLQKSGRITGAQAWIGTLLQMKPVLKFEEDGKIHPLEKVRTRKRAYNSIEQHALDIAKNINDVTVFVINGDKIKEGKDFCAKLKEKYSNINIQYCEYGPVIASHLGSGGIGVGYFPRKIVIE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 146572 147438 . + . GCA_005502385.1_01391_mRNA GCA_005502385.1_01391 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKIAVMTDSTANLPKHIIEKYQIPVAPLSVTFDDGETFTEHPDLSKESFYKKMAASKTIPTTSQPAIGEWIKNYEELRDKGYTDVIVFNLSSGISGSYQSATQAGEMVDGIQVHTFDTRLASMIEGSYVIYTLKLIEDGATPNEIIDELTSIRKDTGAYLFVDDLKNLQKSGRITGAQAWIGTLLQMKPVLKFEEDGKIHPLEKVRTRKRAYNSIEQHALDIAKNINDVTVFVINGDKIKEGKDFCAKLKEKYSNINIQYCEYGPVIASHLGSGGIGVGYFPRKIVIE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 146572 147438 . + 0 GCA_005502385.1_01391 GCA_005502385.1_01391_gene,GCA_005502385.1_01391_mRNA GCA_005502385.1_01391 DegV domain-containing protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKIAVMTDSTANLPKHIIEKYQIPVAPLSVTFDDGETFTEHPDLSKESFYKKMAASKTIPTTSQPAIGEWIKNYEELRDKGYTDVIVFNLSSGISGSYQSATQAGEMVDGIQVHTFDTRLASMIEGSYVIYTLKLIEDGATPNEIIDELTSIRKDTGAYLFVDDLKNLQKSGRITGAQAWIGTLLQMKPVLKFEEDGKIHPLEKVRTRKRAYNSIEQHALDIAKNINDVTVFVINGDKIKEGKDFCAKLKEKYSNINIQYCEYGPVIASHLGSGGIGVGYFPRKIVIE persistent 288 fakB1 fatty acid kinase binding subunit FakB1 WP_048679876.1 UPI0006611DDE UniRef100_UPI0006611DDE,UniRef50_P0A0N1,UniRef90_A0A8X8KIF3 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 147745 148827 . + . GCA_005502385.1_01392_gene GCA_005502385.1_01392 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDNITEYKIIKSKNVKSEGLYTLSFKLSEQQCYASEKILSAIENCEDLLLYAVTGAGKTEMIYEGISLSRKRGFNVAIISPRVDVVVEISQRIKEVFLKEDIDVLHQSSKQQYNGHFVICTIHQLYRFKNHFEVIFVDEVDAFPLPMDHHLQNAIKQAAKPLSTLIYMTATPPRHLLRQIPKHRIIQLPARFHRHPLPVPKFKYFKLNMNRTQSFLKYMLLNQIEHKRFTLVFFNNIEKMIKISEYYKKIFSDLICISSEDALRFEKVKALREGKHRIVFTTTILERGFTMAQLDVIVINADTFEKAALVQIAGRVGRKQEAPTGMVLFLHEGVSISMLMAKKDITRMNKLGIQRGWIDE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 147745 148827 . + . GCA_005502385.1_01392_mRNA GCA_005502385.1_01392 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDNITEYKIIKSKNVKSEGLYTLSFKLSEQQCYASEKILSAIENCEDLLLYAVTGAGKTEMIYEGISLSRKRGFNVAIISPRVDVVVEISQRIKEVFLKEDIDVLHQSSKQQYNGHFVICTIHQLYRFKNHFEVIFVDEVDAFPLPMDHHLQNAIKQAAKPLSTLIYMTATPPRHLLRQIPKHRIIQLPARFHRHPLPVPKFKYFKLNMNRTQSFLKYMLLNQIEHKRFTLVFFNNIEKMIKISEYYKKIFSDLICISSEDALRFEKVKALREGKHRIVFTTTILERGFTMAQLDVIVINADTFEKAALVQIAGRVGRKQEAPTGMVLFLHEGVSISMLMAKKDITRMNKLGIQRGWIDE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 147745 148827 . + 0 GCA_005502385.1_01392 GCA_005502385.1_01392_gene,GCA_005502385.1_01392_mRNA GCA_005502385.1_01392 ComF operon protein 1 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDNITEYKIIKSKNVKSEGLYTLSFKLSEQQCYASEKILSAIENCEDLLLYAVTGAGKTEMIYEGISLSRKRGFNVAIISPRVDVVVEISQRIKEVFLKEDIDVLHQSSKQQYNGHFVICTIHQLYRFKNHFEVIFVDEVDAFPLPMDHHLQNAIKQAAKPLSTLIYMTATPPRHLLRQIPKHRIIQLPARFHRHPLPVPKFKYFKLNMNRTQSFLKYMLLNQIEHKRFTLVFFNNIEKMIKISEYYKKIFSDLICISSEDALRFEKVKALREGKHRIVFTTTILERGFTMAQLDVIVINADTFEKAALVQIAGRVGRKQEAPTGMVLFLHEGVSISMLMAKKDITRMNKLGIQRGWIDE persistent 360 Comf operon protein 1 WP_019834943.1 UPI00037455A9 UniRef100_UPI00037455A9,UniRef50_A0A151A6Y3,UniRef90_A0A3S7GU39 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 148820 149497 . + . GCA_005502385.1_01393_gene GCA_005502385.1_01393 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNKCIQCATSIHEELSIFNFYKPPQQFCETCKKQWQAIKLDINDEKRCTRCLNYKINTGDECLDCKCLNQQFTLMSQLYCDYKYDGIMKETIHHYKFMKDYYLAEVLASKLTLPKTSYDYIVPIPSPYKRDEHRTFNPVTTVLDKMGISYIELLGTRSRPKQSRLGKKERFKADNPFYLKENIDITNKNILLIDDIYTTGLTVHYAGSVLCNKKVRKFKVFAFSR . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 148820 149497 . + . GCA_005502385.1_01393_mRNA GCA_005502385.1_01393 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNKCIQCATSIHEELSIFNFYKPPQQFCETCKKQWQAIKLDINDEKRCTRCLNYKINTGDECLDCKCLNQQFTLMSQLYCDYKYDGIMKETIHHYKFMKDYYLAEVLASKLTLPKTSYDYIVPIPSPYKRDEHRTFNPVTTVLDKMGISYIELLGTRSRPKQSRLGKKERFKADNPFYLKENIDITNKNILLIDDIYTTGLTVHYAGSVLCNKKVRKFKVFAFSR . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 148820 149497 . + 0 GCA_005502385.1_01393 GCA_005502385.1_01393_gene,GCA_005502385.1_01393_mRNA GCA_005502385.1_01393 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNKCIQCATSIHEELSIFNFYKPPQQFCETCKKQWQAIKLDINDEKRCTRCLNYKINTGDECLDCKCLNQQFTLMSQLYCDYKYDGIMKETIHHYKFMKDYYLAEVLASKLTLPKTSYDYIVPIPSPYKRDEHRTFNPVTTVLDKMGISYIELLGTRSRPKQSRLGKKERFKADNPFYLKENIDITNKNILLIDDIYTTGLTVHYAGSVLCNKKVRKFKVFAFSR persistent 225 comF ComF family protein WP_017175928.1 UPI0002E95645 UniRef100_A0A3S7GTZ2,UniRef50_Q2G056,UniRef90_A0A3S7GTZ2 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 149559 150134 . + . GCA_005502385.1_01394_gene GCA_005502385.1_01394 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIRFEIHGDNLTITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYQNSATKIEVTIPLKNVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNRKNRDNGEQEPFIAEQQTVVNEDVEDTSESSNENEIEIIRSKQFSLKPMDSEEAVLQMDLLGHDFYIFTDRETDGTSIVYRRKDGKYGLIETTE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 149559 150134 . + . GCA_005502385.1_01394_mRNA GCA_005502385.1_01394 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIRFEIHGDNLTITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYQNSATKIEVTIPLKNVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNRKNRDNGEQEPFIAEQQTVVNEDVEDTSESSNENEIEIIRSKQFSLKPMDSEEAVLQMDLLGHDFYIFTDRETDGTSIVYRRKDGKYGLIETTE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 149559 150134 . + 0 GCA_005502385.1_01394 GCA_005502385.1_01394_gene,GCA_005502385.1_01394_mRNA GCA_005502385.1_01394 Ribosome hibernation promotion factor GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MIRFEIHGDNLTITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYQNSATKIEVTIPLKNVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNRKNRDNGEQEPFIAEQQTVVNEDVEDTSESSNENEIEIIRSKQFSLKPMDSEEAVLQMDLLGHDFYIFTDRETDGTSIVYRRKDGKYGLIETTE persistent 191 hpf ribosome hibernation-promoting factor, HPF/YfiA family GO:0005840,GO:0045182 WP_017175927.1 UPI000308825C UniRef100_A0A4Q9WQT3,UniRef50_P28368,UniRef90_A0A4Q9WQT3 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 150596 153133 . + . GCA_005502385.1_01395_gene GCA_005502385.1_01395 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MGFLSKIVDGNKKEVKRLSKKADEVLALEEKIAILTDEEIRNKTKQFQEEAQAIEDVKKQNDYLDKILPQAFALVREGAKRVFNMSPYKVQVMGGIAIHKGDIAEMRTGEGKTLTATMPTYLNALAGRGVHVITVNEYLSSVQSEEMAELYEFLGLTVGLNLNSKSTEEKREAYAKDITYSTNNELGFDYLRDNMVNYAEERVMRPLHFAIIDEVDSILIDEARTPLIISGEAEKSTSLYTQANVFAKMLKADEDYKYDEKTKAVHLTEQGADKAERMFKIDNLYDVQNVDIISHINTALRAHVTLQRDVDYMVVDGEVLIVDQFTGRTMPGRRFSEGLHQAIEAKEGVKIQNESKTMASITFQNYFRMYNKLAGMTGTAKTEEEEFRNIYNMTVTQIPTNKPVQRQDKSDLIYISQKGKFDAVVDDVVEKHKQGQPVLLGTVAVETSEYISNLLKKRGIRHDVLNAKNHEREAEIVANAGQKGAVTIATNMAGRGTDIKLGEGVEEIGGLAVIGTERHESRRIDDQLRGRSGRQGDKGDSRFYLSLQDELMVRFGSERLQKMMNRLGMDDSTPIESKMVSRAVESAQKRVEGNNFDARKRILEYDEVLRKQREIIYNERNSIIDSEDSSEIVMAMMRTTLQRAINYYINDEDDNPDYGPFIDYVNDVFIQEGELTEEEIKGKDSEDIFEVVWAKIEKGYEIQKEKIGDQMPEFERMILLRSIDTHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDLMMQAIEEDTSKYILKSVIQVDEQVEREKTTDFGKAQHVSAEDGKEKAKKQPIVKGEKIGRNDPCPCGSGKKYKNCHGKED . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 150596 153133 . + . GCA_005502385.1_01395_mRNA GCA_005502385.1_01395 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MGFLSKIVDGNKKEVKRLSKKADEVLALEEKIAILTDEEIRNKTKQFQEEAQAIEDVKKQNDYLDKILPQAFALVREGAKRVFNMSPYKVQVMGGIAIHKGDIAEMRTGEGKTLTATMPTYLNALAGRGVHVITVNEYLSSVQSEEMAELYEFLGLTVGLNLNSKSTEEKREAYAKDITYSTNNELGFDYLRDNMVNYAEERVMRPLHFAIIDEVDSILIDEARTPLIISGEAEKSTSLYTQANVFAKMLKADEDYKYDEKTKAVHLTEQGADKAERMFKIDNLYDVQNVDIISHINTALRAHVTLQRDVDYMVVDGEVLIVDQFTGRTMPGRRFSEGLHQAIEAKEGVKIQNESKTMASITFQNYFRMYNKLAGMTGTAKTEEEEFRNIYNMTVTQIPTNKPVQRQDKSDLIYISQKGKFDAVVDDVVEKHKQGQPVLLGTVAVETSEYISNLLKKRGIRHDVLNAKNHEREAEIVANAGQKGAVTIATNMAGRGTDIKLGEGVEEIGGLAVIGTERHESRRIDDQLRGRSGRQGDKGDSRFYLSLQDELMVRFGSERLQKMMNRLGMDDSTPIESKMVSRAVESAQKRVEGNNFDARKRILEYDEVLRKQREIIYNERNSIIDSEDSSEIVMAMMRTTLQRAINYYINDEDDNPDYGPFIDYVNDVFIQEGELTEEEIKGKDSEDIFEVVWAKIEKGYEIQKEKIGDQMPEFERMILLRSIDTHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDLMMQAIEEDTSKYILKSVIQVDEQVEREKTTDFGKAQHVSAEDGKEKAKKQPIVKGEKIGRNDPCPCGSGKKYKNCHGKED . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 150596 153133 . + 0 GCA_005502385.1_01395 GCA_005502385.1_01395_gene,GCA_005502385.1_01395_mRNA GCA_005502385.1_01395 Protein translocase subunit SecA 1 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MGFLSKIVDGNKKEVKRLSKKADEVLALEEKIAILTDEEIRNKTKQFQEEAQAIEDVKKQNDYLDKILPQAFALVREGAKRVFNMSPYKVQVMGGIAIHKGDIAEMRTGEGKTLTATMPTYLNALAGRGVHVITVNEYLSSVQSEEMAELYEFLGLTVGLNLNSKSTEEKREAYAKDITYSTNNELGFDYLRDNMVNYAEERVMRPLHFAIIDEVDSILIDEARTPLIISGEAEKSTSLYTQANVFAKMLKADEDYKYDEKTKAVHLTEQGADKAERMFKIDNLYDVQNVDIISHINTALRAHVTLQRDVDYMVVDGEVLIVDQFTGRTMPGRRFSEGLHQAIEAKEGVKIQNESKTMASITFQNYFRMYNKLAGMTGTAKTEEEEFRNIYNMTVTQIPTNKPVQRQDKSDLIYISQKGKFDAVVDDVVEKHKQGQPVLLGTVAVETSEYISNLLKKRGIRHDVLNAKNHEREAEIVANAGQKGAVTIATNMAGRGTDIKLGEGVEEIGGLAVIGTERHESRRIDDQLRGRSGRQGDKGDSRFYLSLQDELMVRFGSERLQKMMNRLGMDDSTPIESKMVSRAVESAQKRVEGNNFDARKRILEYDEVLRKQREIIYNERNSIIDSEDSSEIVMAMMRTTLQRAINYYINDEDDNPDYGPFIDYVNDVFIQEGELTEEEIKGKDSEDIFEVVWAKIEKGYEIQKEKIGDQMPEFERMILLRSIDTHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDLMMQAIEEDTSKYILKSVIQVDEQVEREKTTDFGKAQHVSAEDGKEKAKKQPIVKGEKIGRNDPCPCGSGKKYKNCHGKED persistent 845 secA preprotein translocase subunit SecA 7.4.2.8 GO:0005524,GO:0006605,GO:0006886,GO:0017038 WP_017175926.1 UPI00031C84AD UniRef100_A0A1L8Y5A8,UniRef50_O06446,UniRef90_A0A1L8Y5A8 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 153366 154361 . + . GCA_005502385.1_01396_gene GCA_005502385.1_01396 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTEPDFWDNQNKAQDVIDKNNALKSIVNGYYELNHKLEDMDATWELLQEEYDDEIKEDLEQDIVTFREQIDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQGFKVETIDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPEFDNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETAKVDAVMDGDIAPFIEAYLRQTMSQND . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 153366 154361 . + . GCA_005502385.1_01396_mRNA GCA_005502385.1_01396 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTEPDFWDNQNKAQDVIDKNNALKSIVNGYYELNHKLEDMDATWELLQEEYDDEIKEDLEQDIVTFREQIDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQGFKVETIDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPEFDNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETAKVDAVMDGDIAPFIEAYLRQTMSQND . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 153366 154361 . + 0 GCA_005502385.1_01396 GCA_005502385.1_01396_gene,GCA_005502385.1_01396_mRNA GCA_005502385.1_01396 Peptide chain release factor 2 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTEPDFWDNQNKAQDVIDKNNALKSIVNGYYELNHKLEDMDATWELLQEEYDDEIKEDLEQDIVTFREQIDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQGFKVETIDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPEFDNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETAKVDAVMDGDIAPFIEAYLRQTMSQND persistent 331 prfB peptide chain release factor 2 GO:0005737,GO:0006415,GO:0016149,GO:0075523 COG1186,J UniRef50_Q49VV3,UniRef90_Q4L4H9 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 154582 155472 . + . GCA_005502385.1_01397_gene GCA_005502385.1_01397 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLKKSMTVTFASIAAITGLNTLAHAQQTHIVKEKTNVEALAQQFSTTADEIKKLNHIGNEEVEKDISIVVPDKDIVEVKSGDTLNNIANAHHLTLDELYAFNPGVKPLIHPGDLIAVSDKGSATLESQLISDSSVYATPYSSETETAPLSYNSAETASYVASPSYVTSNNYNTETVSAPVYYNNSALNNQGNHYYFGNCTYYAFDRRQQLGRSVGSYWGNANNWASSARNAGLVVDHRPEVGAVFQTPAGYYGHVGIVERVNNDGSFYVSEMNWNGHFNDVTNRTIYNSSSYNFIH . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 154582 155472 . + . GCA_005502385.1_01397_mRNA GCA_005502385.1_01397 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLKKSMTVTFASIAAITGLNTLAHAQQTHIVKEKTNVEALAQQFSTTADEIKKLNHIGNEEVEKDISIVVPDKDIVEVKSGDTLNNIANAHHLTLDELYAFNPGVKPLIHPGDLIAVSDKGSATLESQLISDSSVYATPYSSETETAPLSYNSAETASYVASPSYVTSNNYNTETVSAPVYYNNSALNNQGNHYYFGNCTYYAFDRRQQLGRSVGSYWGNANNWASSARNAGLVVDHRPEVGAVFQTPAGYYGHVGIVERVNNDGSFYVSEMNWNGHFNDVTNRTIYNSSSYNFIH . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 154582 155472 . + 0 GCA_005502385.1_01397 GCA_005502385.1_01397_gene,GCA_005502385.1_01397_mRNA GCA_005502385.1_01397 putative autolysin LDP GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLKKSMTVTFASIAAITGLNTLAHAQQTHIVKEKTNVEALAQQFSTTADEIKKLNHIGNEEVEKDISIVVPDKDIVEVKSGDTLNNIANAHHLTLDELYAFNPGVKPLIHPGDLIAVSDKGSATLESQLISDSSVYATPYSSETETAPLSYNSAETASYVASPSYVTSNNYNTETVSAPVYYNNSALNNQGNHYYFGNCTYYAFDRRQQLGRSVGSYWGNANNWASSARNAGLVVDHRPEVGAVFQTPAGYYGHVGIVERVNNDGSFYVSEMNWNGHFNDVTNRTIYNSSSYNFIH persistent 296 CHAP domain-containing protein WP_002448211.1 UPI00019FC433 UniRef100_UPI001F56DD52,UniRef50_A0A3S7GTP8,UniRef90_A0A3S7GTP8 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 155491 155655 . + . GCA_005502385.1_01398_gene GCA_005502385.1_01398 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLKHQQSLCFVDVFLVINNAMYCLKKEIKVMKLSQLKLFTKRLIDIINTSIISI . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 155491 155655 . + . GCA_005502385.1_01398_mRNA GCA_005502385.1_01398 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLKHQQSLCFVDVFLVINNAMYCLKKEIKVMKLSQLKLFTKRLIDIINTSIISI . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 155491 155655 . + 0 GCA_005502385.1_01398 GCA_005502385.1_01398_gene,GCA_005502385.1_01398_mRNA GCA_005502385.1_01398 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLKHQQSLCFVDVFLVINNAMYCLKKEIKVMKLSQLKLFTKRLIDIINTSIISI shell 54 hypothetical protein . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 155681 156328 . + . GCA_005502385.1_01399_gene GCA_005502385.1_01399 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MGVHQYFKRLSDLEKLIRLPGKFKYFEHNVAAHSFKVTKIAQYLATVEEYHGNSIDWKSLYEKALNHDFAEVFTGDIKTPVKYASRELKMLFSQVEEEMVDTFINEEIPKPYQDIYRKRLQEGKDDSLEGQILSVADKIDLLYETFGEIQKRNPEDLFFEIYEHSLETIMQFDHLSSVQDFIDHVIPEMLTENFIPRAELRETTMSILERRRRNE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 155681 156328 . + . GCA_005502385.1_01399_mRNA GCA_005502385.1_01399 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MGVHQYFKRLSDLEKLIRLPGKFKYFEHNVAAHSFKVTKIAQYLATVEEYHGNSIDWKSLYEKALNHDFAEVFTGDIKTPVKYASRELKMLFSQVEEEMVDTFINEEIPKPYQDIYRKRLQEGKDDSLEGQILSVADKIDLLYETFGEIQKRNPEDLFFEIYEHSLETIMQFDHLSSVQDFIDHVIPEMLTENFIPRAELRETTMSILERRRRNE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 155681 156328 . + 0 GCA_005502385.1_01399 GCA_005502385.1_01399_gene,GCA_005502385.1_01399_mRNA GCA_005502385.1_01399 5'-deoxynucleotidase YfbR GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MGVHQYFKRLSDLEKLIRLPGKFKYFEHNVAAHSFKVTKIAQYLATVEEYHGNSIDWKSLYEKALNHDFAEVFTGDIKTPVKYASRELKMLFSQVEEEMVDTFINEEIPKPYQDIYRKRLQEGKDDSLEGQILSVADKIDLLYETFGEIQKRNPEDLFFEIYEHSLETIMQFDHLSSVQDFIDHVIPEMLTENFIPRAELRETTMSILERRRRNE persistent 215 HD domain-containing protein WP_017175923.1 UPI0002FAD9BF UniRef100_A0A1L8Y585,UniRef50_A0A239ZXJ0,UniRef90_A0A2K4DUY0 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 156334 156561 . + . GCA_005502385.1_01400_gene GCA_005502385.1_01400 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MVWYTLAAFFPCILVILFSVITRSKWVGVIVTLILIAASVYKGFFHNEWIIFLDVVSILAGYVIIDNLELHKHQD . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 156334 156561 . + . GCA_005502385.1_01400_mRNA GCA_005502385.1_01400 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MVWYTLAAFFPCILVILFSVITRSKWVGVIVTLILIAASVYKGFFHNEWIIFLDVVSILAGYVIIDNLELHKHQD . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 156334 156561 . + 0 GCA_005502385.1_01400 GCA_005502385.1_01400_gene,GCA_005502385.1_01400_mRNA GCA_005502385.1_01400 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MVWYTLAAFFPCILVILFSVITRSKWVGVIVTLILIAASVYKGFFHNEWIIFLDVVSILAGYVIIDNLELHKHQD persistent 75 DUF2198 domain-containing protein UniRef50_Q2G051,UniRef90_A0A974QN30 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 156829 158814 . + . GCA_005502385.1_01401_gene GCA_005502385.1_01401 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MVEHHPFKLNSEFEPQGDQPQAIKKIVEGVKAGKRHQTLLGATGTGKTFTMSNVIKEVGKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLVVSVRVGMEMDRSELLRKLVDVQYSRNDIDFQRGTFRVRGDVVEIFPASREEMCIRVEFFGDEVDRIREVNYLTGEVIREREHFAIFPASHFVTREEKMKVAIERIEKELEERLKELKAENKLLEAQRLEQRTNYDLEMMREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDDWLVMIDESHVTLPQIRGMFNGDQARKKVLVDHGFRLPSAMDNRPLKFEEFEQKTKQLVYVSATPGPYEIEHTDKMVEQIIRPTGLLDPKIDVRPTKNQIDDLLSEIQERIDRNERVLVTTLTKKMSEDLTTYMKEAGIKVNYLHSEIKTLERIEIIRDLRMGTYDAVVGINLLREGIDIPEVSLVVILDADKEGFLRSNRSLIQTIGRAARNDKGEVIMYADKITDSMQYAIDETQRRREIQMAHNEKYGITPKTINKKIHDVISATVDNDDTNEKQQTEVPKKMTKKERQKTIENIEKEMKKAAKDLDFERATELRDMLFELKAEG . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 156829 158814 . + . GCA_005502385.1_01401_mRNA GCA_005502385.1_01401 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MVEHHPFKLNSEFEPQGDQPQAIKKIVEGVKAGKRHQTLLGATGTGKTFTMSNVIKEVGKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLVVSVRVGMEMDRSELLRKLVDVQYSRNDIDFQRGTFRVRGDVVEIFPASREEMCIRVEFFGDEVDRIREVNYLTGEVIREREHFAIFPASHFVTREEKMKVAIERIEKELEERLKELKAENKLLEAQRLEQRTNYDLEMMREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDDWLVMIDESHVTLPQIRGMFNGDQARKKVLVDHGFRLPSAMDNRPLKFEEFEQKTKQLVYVSATPGPYEIEHTDKMVEQIIRPTGLLDPKIDVRPTKNQIDDLLSEIQERIDRNERVLVTTLTKKMSEDLTTYMKEAGIKVNYLHSEIKTLERIEIIRDLRMGTYDAVVGINLLREGIDIPEVSLVVILDADKEGFLRSNRSLIQTIGRAARNDKGEVIMYADKITDSMQYAIDETQRRREIQMAHNEKYGITPKTINKKIHDVISATVDNDDTNEKQQTEVPKKMTKKERQKTIENIEKEMKKAAKDLDFERATELRDMLFELKAEG . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 156829 158814 . + 0 GCA_005502385.1_01401 GCA_005502385.1_01401_gene,GCA_005502385.1_01401_mRNA GCA_005502385.1_01401 UvrABC system protein B GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MVEHHPFKLNSEFEPQGDQPQAIKKIVEGVKAGKRHQTLLGATGTGKTFTMSNVIKEVGKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLVVSVRVGMEMDRSELLRKLVDVQYSRNDIDFQRGTFRVRGDVVEIFPASREEMCIRVEFFGDEVDRIREVNYLTGEVIREREHFAIFPASHFVTREEKMKVAIERIEKELEERLKELKAENKLLEAQRLEQRTNYDLEMMREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDDWLVMIDESHVTLPQIRGMFNGDQARKKVLVDHGFRLPSAMDNRPLKFEEFEQKTKQLVYVSATPGPYEIEHTDKMVEQIIRPTGLLDPKIDVRPTKNQIDDLLSEIQERIDRNERVLVTTLTKKMSEDLTTYMKEAGIKVNYLHSEIKTLERIEIIRDLRMGTYDAVVGINLLREGIDIPEVSLVVILDADKEGFLRSNRSLIQTIGRAARNDKGEVIMYADKITDSMQYAIDETQRRREIQMAHNEKYGITPKTINKKIHDVISATVDNDDTNEKQQTEVPKKMTKKERQKTIENIEKEMKKAAKDLDFERATELRDMLFELKAEG persistent 661 uvrB excinuclease ABC subunit UvrB 3.1.25.- GO:0003677,GO:0005515,GO:0005524,GO:0005737,GO:0006289,GO:0009380,GO:0009381,GO:0009432,GO:0016787,GO:0016887 COG0556,L WP_019834949.1 UPI0003734EFB UniRef100_UPI0003734EFB,UniRef50_P56981,UniRef90_Q4L4I5 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 158822 161662 . + . GCA_005502385.1_01402_gene GCA_005502385.1_01402 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKGPSIVVKGARAHNLKDIDIELPKNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYARVGKAFCPYHGIEIESQTVQQMVDRILELEERTKIQILAPLVSHRKGSHEKLIEDIGKKGYVRLRVNGEVVDVNEVPALDKNKNHTIEVVVDRLVVKSGIETRLADSIETSLELGEGNLTVDVIGGEDLKFSENHACPICGFSIGELEPRMFSFNSPFGACPTCDGLGQRLTVDLDLVVPDTNKTLNEGAIEPWEPTSSDFYPTLLKRVCEVYKINMDKPYKKLTDRQKDILMNGSGDKEIEFSFHSRNGGTRRRKMKFEGVVPNIDRRYHESPSEYTREMMSRYMTELPCETCHGKRLSKEALSVYVGGYNIGEVVEYSIKNALKFYENIELSEQDKAIAKQILIEIISRLTFLNNVGLDYLTLNRSSGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQRDNDRLINTLKEMRDLGNTLIVVEHDDDTMRAADYLVDVGPGAGNHGGEIVSSGTPKKVMKDKKSLTGQYLSGKKRIDVPEHRREITNRKISIKGAKSNNLKDVDVDIPLSVMTVVTGVSGSGKSSLVNEVLYKSLAQAINNSKVKPGEHDEIKGIDQLDKIIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEAKIRGYQKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCDGKRYNRETLEVTYKGKNIADVLAMTVEEATYFFENIPKIHRKLQTLVDVGLGYITLGQQATTLSGGEAQRVKLASELHKRSTGRSIYILDEPTTGLHVDDISRLLKVLNRLVENGDTVVIIEHNLDVIKTADYIIDLGPEGGEGGGTIVATGTPEEIASVEASYTGKYLKTVLERDKVRDE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 158822 161662 . + . GCA_005502385.1_01402_mRNA GCA_005502385.1_01402 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKGPSIVVKGARAHNLKDIDIELPKNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYARVGKAFCPYHGIEIESQTVQQMVDRILELEERTKIQILAPLVSHRKGSHEKLIEDIGKKGYVRLRVNGEVVDVNEVPALDKNKNHTIEVVVDRLVVKSGIETRLADSIETSLELGEGNLTVDVIGGEDLKFSENHACPICGFSIGELEPRMFSFNSPFGACPTCDGLGQRLTVDLDLVVPDTNKTLNEGAIEPWEPTSSDFYPTLLKRVCEVYKINMDKPYKKLTDRQKDILMNGSGDKEIEFSFHSRNGGTRRRKMKFEGVVPNIDRRYHESPSEYTREMMSRYMTELPCETCHGKRLSKEALSVYVGGYNIGEVVEYSIKNALKFYENIELSEQDKAIAKQILIEIISRLTFLNNVGLDYLTLNRSSGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQRDNDRLINTLKEMRDLGNTLIVVEHDDDTMRAADYLVDVGPGAGNHGGEIVSSGTPKKVMKDKKSLTGQYLSGKKRIDVPEHRREITNRKISIKGAKSNNLKDVDVDIPLSVMTVVTGVSGSGKSSLVNEVLYKSLAQAINNSKVKPGEHDEIKGIDQLDKIIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEAKIRGYQKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCDGKRYNRETLEVTYKGKNIADVLAMTVEEATYFFENIPKIHRKLQTLVDVGLGYITLGQQATTLSGGEAQRVKLASELHKRSTGRSIYILDEPTTGLHVDDISRLLKVLNRLVENGDTVVIIEHNLDVIKTADYIIDLGPEGGEGGGTIVATGTPEEIASVEASYTGKYLKTVLERDKVRDE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 158822 161662 . + 0 GCA_005502385.1_01402 GCA_005502385.1_01402_gene,GCA_005502385.1_01402_mRNA GCA_005502385.1_01402 UvrABC system protein A GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKGPSIVVKGARAHNLKDIDIELPKNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYARVGKAFCPYHGIEIESQTVQQMVDRILELEERTKIQILAPLVSHRKGSHEKLIEDIGKKGYVRLRVNGEVVDVNEVPALDKNKNHTIEVVVDRLVVKSGIETRLADSIETSLELGEGNLTVDVIGGEDLKFSENHACPICGFSIGELEPRMFSFNSPFGACPTCDGLGQRLTVDLDLVVPDTNKTLNEGAIEPWEPTSSDFYPTLLKRVCEVYKINMDKPYKKLTDRQKDILMNGSGDKEIEFSFHSRNGGTRRRKMKFEGVVPNIDRRYHESPSEYTREMMSRYMTELPCETCHGKRLSKEALSVYVGGYNIGEVVEYSIKNALKFYENIELSEQDKAIAKQILIEIISRLTFLNNVGLDYLTLNRSSGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQRDNDRLINTLKEMRDLGNTLIVVEHDDDTMRAADYLVDVGPGAGNHGGEIVSSGTPKKVMKDKKSLTGQYLSGKKRIDVPEHRREITNRKISIKGAKSNNLKDVDVDIPLSVMTVVTGVSGSGKSSLVNEVLYKSLAQAINNSKVKPGEHDEIKGIDQLDKIIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEAKIRGYQKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCDGKRYNRETLEVTYKGKNIADVLAMTVEEATYFFENIPKIHRKLQTLVDVGLGYITLGQQATTLSGGEAQRVKLASELHKRSTGRSIYILDEPTTGLHVDDISRLLKVLNRLVENGDTVVIIEHNLDVIKTADYIIDLGPEGGEGGGTIVATGTPEEIASVEASYTGKYLKTVLERDKVRDE persistent 946 uvrA excinuclease ABC subunit UvrA 3.1.25.- GO:0003677,GO:0005524,GO:0006289,GO:0016887 WP_070436765.1 UPI0008A655A6 UniRef100_UPI0008A655A6,UniRef50_Q8F435,UniRef90_A0A853V5G7 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 161841 162776 . + . GCA_005502385.1_01403_gene GCA_005502385.1_01403 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLTTERLVKVLKLKLFTGEKGLNKTIKNIDISRPGLEMAGYFSHYAANRIQLLGTTELSFYNLLPDEERRGRMRKLCRPETPAIIVTRGLEPPQELIEAAQEMETPLIVSKDATTSLMSRLTTFLEHELAKTTSLHGVLVDVYGVGVLITGDSGIGKSETALELVKRGHRLVADDNVEIREITKDELIGTPPKLIEHLLEIRGLGIINVMTLFGAGSILTQKQIRLNINLENWDKNKLYDRVGLNEETLKILDTEITKKTIPVRPGRNVAVIIEVAAMNYRLNIMGINTAEEFNQRLNEEILKNGNQNEGI . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 161841 162776 . + . GCA_005502385.1_01403_mRNA GCA_005502385.1_01403 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLTTERLVKVLKLKLFTGEKGLNKTIKNIDISRPGLEMAGYFSHYAANRIQLLGTTELSFYNLLPDEERRGRMRKLCRPETPAIIVTRGLEPPQELIEAAQEMETPLIVSKDATTSLMSRLTTFLEHELAKTTSLHGVLVDVYGVGVLITGDSGIGKSETALELVKRGHRLVADDNVEIREITKDELIGTPPKLIEHLLEIRGLGIINVMTLFGAGSILTQKQIRLNINLENWDKNKLYDRVGLNEETLKILDTEITKKTIPVRPGRNVAVIIEVAAMNYRLNIMGINTAEEFNQRLNEEILKNGNQNEGI . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 161841 162776 . + 0 GCA_005502385.1_01403 GCA_005502385.1_01403_gene,GCA_005502385.1_01403_mRNA GCA_005502385.1_01403 HPr kinase/phosphorylase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLTTERLVKVLKLKLFTGEKGLNKTIKNIDISRPGLEMAGYFSHYAANRIQLLGTTELSFYNLLPDEERRGRMRKLCRPETPAIIVTRGLEPPQELIEAAQEMETPLIVSKDATTSLMSRLTTFLEHELAKTTSLHGVLVDVYGVGVLITGDSGIGKSETALELVKRGHRLVADDNVEIREITKDELIGTPPKLIEHLLEIRGLGIINVMTLFGAGSILTQKQIRLNINLENWDKNKLYDRVGLNEETLKILDTEITKKTIPVRPGRNVAVIIEVAAMNYRLNIMGINTAEEFNQRLNEEILKNGNQNEGI persistent 311 hprK HPr(Ser) kinase/phosphatase 2.7.11.-,2.7.4.- GO:0000155,GO:0000160,GO:0000287,GO:0004674,GO:0004712,GO:0005524,GO:0006109 COG1493,T WP_002448148.1 UPI00019FC4F3 UniRef100_UPI00019FC4F3,UniRef50_O34483,UniRef90_Q4L4I7 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 162780 163622 . + . GCA_005502385.1_01404_gene GCA_005502385.1_01404 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLFNLNYINPTAIDIGPLSIKWYGIIIAVGILIGYFIAQESLKSIGLHKDTLVDIIFYCAIFGFLVARIYFVIFQWPYYMENPSEIPKIWHGGIAIHGGLIGGFITGIILCKLKNLNPFQIGDIVAPSIILAQGIGRWGNFMNHEAHGGPVSRTFLENMHIPEFIIRNMYIEGVYYHPTFLYESIWDILGFIILITLRKYLRVGETFSLYLIWYSIGRFFVEGLRTDSLMLTSHIRVAQLVSIILIIIGMTLIIYRRIKYQPAIYKNAGPLTWNSRGKVK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 162780 163622 . + . GCA_005502385.1_01404_mRNA GCA_005502385.1_01404 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLFNLNYINPTAIDIGPLSIKWYGIIIAVGILIGYFIAQESLKSIGLHKDTLVDIIFYCAIFGFLVARIYFVIFQWPYYMENPSEIPKIWHGGIAIHGGLIGGFITGIILCKLKNLNPFQIGDIVAPSIILAQGIGRWGNFMNHEAHGGPVSRTFLENMHIPEFIIRNMYIEGVYYHPTFLYESIWDILGFIILITLRKYLRVGETFSLYLIWYSIGRFFVEGLRTDSLMLTSHIRVAQLVSIILIIIGMTLIIYRRIKYQPAIYKNAGPLTWNSRGKVK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 162780 163622 . + 0 GCA_005502385.1_01404 GCA_005502385.1_01404_gene,GCA_005502385.1_01404_mRNA GCA_005502385.1_01404 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLFNLNYINPTAIDIGPLSIKWYGIIIAVGILIGYFIAQESLKSIGLHKDTLVDIIFYCAIFGFLVARIYFVIFQWPYYMENPSEIPKIWHGGIAIHGGLIGGFITGIILCKLKNLNPFQIGDIVAPSIILAQGIGRWGNFMNHEAHGGPVSRTFLENMHIPEFIIRNMYIEGVYYHPTFLYESIWDILGFIILITLRKYLRVGETFSLYLIWYSIGRFFVEGLRTDSLMLTSHIRVAQLVSIILIIIGMTLIIYRRIKYQPAIYKNAGPLTWNSRGKVK persistent 280 lgt prolipoprotein diacylglyceryl transferase 2.5.1.145 GO:0008961,GO:0009249,GO:0016020 WP_048680598.1 UPI0006608D79 UniRef100_A0A974KX25,UniRef50_Q49VV9,UniRef90_A0A3S7GTY2 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 163622 164101 . + . GCA_005502385.1_01405_gene GCA_005502385.1_01405 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRRLTIINTQSMNPLWRIYQFVRFSKVLKNTVIIEISRFIPFLNVKRYVYIHFLKMSIGERTAFAYKVMPDIFHPQLISIGSNTVIGYNTTILTHEILVNEYRYGRVDIGSHTLIGANVTILPGVKIGHNVMIKAGTIVSKDVPNDTIAFGNPMQIHNK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 163622 164101 . + . GCA_005502385.1_01405_mRNA GCA_005502385.1_01405 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRRLTIINTQSMNPLWRIYQFVRFSKVLKNTVIIEISRFIPFLNVKRYVYIHFLKMSIGERTAFAYKVMPDIFHPQLISIGSNTVIGYNTTILTHEILVNEYRYGRVDIGSHTLIGANVTILPGVKIGHNVMIKAGTIVSKDVPNDTIAFGNPMQIHNK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 163622 164101 . + 0 GCA_005502385.1_01405 GCA_005502385.1_01405_gene,GCA_005502385.1_01405_mRNA GCA_005502385.1_01405 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRRLTIINTQSMNPLWRIYQFVRFSKVLKNTVIIEISRFIPFLNVKRYVYIHFLKMSIGERTAFAYKVMPDIFHPQLISIGSNTVIGYNTTILTHEILVNEYRYGRVDIGSHTLIGANVTILPGVKIGHNVMIKAGTIVSKDVPNDTIAFGNPMQIHNK persistent 159 Acyltransferase WP_002455611.1 UPI0001EF5387 UniRef100_A0A974KX89,UniRef50_Q5HHQ6,UniRef90_A0A974KX89 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 164119 165558 . + . GCA_005502385.1_01406_gene GCA_005502385.1_01406 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MARKEQKIIPMTFDENFYRKMADQKYKQRNYRKAAEYYGNVLDLSPEDFDIKLKYADCLNELNLNKKAEKIFYESIINDHNVSESYYQLSQLNIKLNEPNKAFLFGINYVVLSNDDSFREELENMFEVSYIEENKIEMEAQLFAVQLLFQYLFAQGRLQEARTYILKQNDDIQSHRVIRNLLAMCYLYLSEYEIAKELFETLLAEDNSDVHALCHYTLLLYNTNETEKYHKYIKILNKVMPMNEDESFKLGIVLSYLKQYKASQQLLLPLYKKGKFVSIQMFNALSYNYYYLGNKKQSKLFWDKLLQISEVDVGYAPWVLEESKYTFEQKILPLLLDDDSHYRLYGVFLLNQLNGKEILMTEDIWSVLENMNDYEKLYLTYLVQGLHLNKLDFIHKGLKKMYDVEELSFDTELFVSWIDKGEALIVEGVNFKELNRYIAAHVYLYYRYHKKRITKKKIIEIFNTTRYKLDNAIDKLLSI . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 164119 165558 . + . GCA_005502385.1_01406_mRNA GCA_005502385.1_01406 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MARKEQKIIPMTFDENFYRKMADQKYKQRNYRKAAEYYGNVLDLSPEDFDIKLKYADCLNELNLNKKAEKIFYESIINDHNVSESYYQLSQLNIKLNEPNKAFLFGINYVVLSNDDSFREELENMFEVSYIEENKIEMEAQLFAVQLLFQYLFAQGRLQEARTYILKQNDDIQSHRVIRNLLAMCYLYLSEYEIAKELFETLLAEDNSDVHALCHYTLLLYNTNETEKYHKYIKILNKVMPMNEDESFKLGIVLSYLKQYKASQQLLLPLYKKGKFVSIQMFNALSYNYYYLGNKKQSKLFWDKLLQISEVDVGYAPWVLEESKYTFEQKILPLLLDDDSHYRLYGVFLLNQLNGKEILMTEDIWSVLENMNDYEKLYLTYLVQGLHLNKLDFIHKGLKKMYDVEELSFDTELFVSWIDKGEALIVEGVNFKELNRYIAAHVYLYYRYHKKRITKKKIIEIFNTTRYKLDNAIDKLLSI . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 164119 165558 . + 0 GCA_005502385.1_01406 GCA_005502385.1_01406_gene,GCA_005502385.1_01406_mRNA GCA_005502385.1_01406 Beta-barrel assembly-enhancing protease GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MARKEQKIIPMTFDENFYRKMADQKYKQRNYRKAAEYYGNVLDLSPEDFDIKLKYADCLNELNLNKKAEKIFYESIINDHNVSESYYQLSQLNIKLNEPNKAFLFGINYVVLSNDDSFREELENMFEVSYIEENKIEMEAQLFAVQLLFQYLFAQGRLQEARTYILKQNDDIQSHRVIRNLLAMCYLYLSEYEIAKELFETLLAEDNSDVHALCHYTLLLYNTNETEKYHKYIKILNKVMPMNEDESFKLGIVLSYLKQYKASQQLLLPLYKKGKFVSIQMFNALSYNYYYLGNKKQSKLFWDKLLQISEVDVGYAPWVLEESKYTFEQKILPLLLDDDSHYRLYGVFLLNQLNGKEILMTEDIWSVLENMNDYEKLYLTYLVQGLHLNKLDFIHKGLKKMYDVEELSFDTELFVSWIDKGEALIVEGVNFKELNRYIAAHVYLYYRYHKKRITKKKIIEIFNTTRYKLDNAIDKLLSI persistent 479 Tetratricopeptide repeat protein UniRef50_A0A2T4LUS3,UniRef90_A0AAE5MYH4 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 165622 166563 . + . GCA_005502385.1_01407_gene GCA_005502385.1_01407 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNEVDFDVAIIGAGPAGMTAAVYASRANLNTVMIERGMPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGASYQYGDIKSIEDNGDHKVINLGNKTITARAVIISTGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKNIFVIGGGDSAVEEGAFLTKFADKVTIVHRRDELRAQKILQDRAFKNEKIDFIWSHTLKSINEKDGKVGSVTLVSTKDASEQTLDADGVFIYIGMKPLTAPFNNLGITNDMGYIITKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAIDYIEELKDKEEA . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 165622 166563 . + . GCA_005502385.1_01407_mRNA GCA_005502385.1_01407 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNEVDFDVAIIGAGPAGMTAAVYASRANLNTVMIERGMPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGASYQYGDIKSIEDNGDHKVINLGNKTITARAVIISTGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKNIFVIGGGDSAVEEGAFLTKFADKVTIVHRRDELRAQKILQDRAFKNEKIDFIWSHTLKSINEKDGKVGSVTLVSTKDASEQTLDADGVFIYIGMKPLTAPFNNLGITNDMGYIITKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAIDYIEELKDKEEA . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 165622 166563 . + 0 GCA_005502385.1_01407 GCA_005502385.1_01407_gene,GCA_005502385.1_01407_mRNA GCA_005502385.1_01407 Thioredoxin reductase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNEVDFDVAIIGAGPAGMTAAVYASRANLNTVMIERGMPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGASYQYGDIKSIEDNGDHKVINLGNKTITARAVIISTGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKNIFVIGGGDSAVEEGAFLTKFADKVTIVHRRDELRAQKILQDRAFKNEKIDFIWSHTLKSINEKDGKVGSVTLVSTKDASEQTLDADGVFIYIGMKPLTAPFNNLGITNDMGYIITKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAIDYIEELKDKEEA persistent 313 trxB thioredoxin-disulfide reductase 1.8.1.9 GO:0004791,GO:0005737,GO:0019430,GO:0071949 COG0492,O WP_017175915.1 UPI0003005C60 UniRef100_A0A2A1MEN7,UniRef50_P80880,UniRef90_Q5HQW4 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 166717 167631 . + . GCA_005502385.1_01408_gene GCA_005502385.1_01408 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MVNQINDEMSKSELLVVTGLSGAGKSLVIQCLEDIGFFCVDNLPPILLPKLVELMEQGNPSLQKVAIAIDLRGKELFKSLIDEIDVIKTRNDVIVDVMFLEATTEKLISRYKESRRAHPLNQNGQMSLIDSILEEQQLLSNIRSIANYIIDTTELKPKELKERIKRHFADEKMNSFSINVTSFGFKHGIQKDADLVFDVRFLPNPYYVEDLRPMTGEDEAVYNYVMKWKETETFFEKLMDLLIFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAKRIGEELNDIFDYNVYVHHRDAHIESGVKK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 166717 167631 . + . GCA_005502385.1_01408_mRNA GCA_005502385.1_01408 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MVNQINDEMSKSELLVVTGLSGAGKSLVIQCLEDIGFFCVDNLPPILLPKLVELMEQGNPSLQKVAIAIDLRGKELFKSLIDEIDVIKTRNDVIVDVMFLEATTEKLISRYKESRRAHPLNQNGQMSLIDSILEEQQLLSNIRSIANYIIDTTELKPKELKERIKRHFADEKMNSFSINVTSFGFKHGIQKDADLVFDVRFLPNPYYVEDLRPMTGEDEAVYNYVMKWKETETFFEKLMDLLIFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAKRIGEELNDIFDYNVYVHHRDAHIESGVKK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 166717 167631 . + 0 GCA_005502385.1_01408 GCA_005502385.1_01408_gene,GCA_005502385.1_01408_mRNA GCA_005502385.1_01408 Nucleotide-binding protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MVNQINDEMSKSELLVVTGLSGAGKSLVIQCLEDIGFFCVDNLPPILLPKLVELMEQGNPSLQKVAIAIDLRGKELFKSLIDEIDVIKTRNDVIVDVMFLEATTEKLISRYKESRRAHPLNQNGQMSLIDSILEEQQLLSNIRSIANYIIDTTELKPKELKERIKRHFADEKMNSFSINVTSFGFKHGIQKDADLVFDVRFLPNPYYVEDLRPMTGEDEAVYNYVMKWKETETFFEKLMDLLIFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAKRIGEELNDIFDYNVYVHHRDAHIESGVKK persistent 304 rapZ RNase adapter RapZ GO:0005524 WP_017175914.1 UPI0003031550 UniRef100_A0A4Q9WQR4,UniRef50_Q2G039,UniRef90_A0A657ZNS2 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 167628 168614 . + . GCA_005502385.1_01409_gene GCA_005502385.1_01409 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKQLKVVLIGGGTGLSVLARGLREYPIDITAIVTVADDGGSTGKIRDEMSIPAPGDIRNVIAALSDAEPILEELFQYRFEEHQIEGHSLGNLLLAALTNIKNDFGHAVKELSKILNIKGKVIPSTNTNVMLNAVLEDGEIVKGESKIPKKNKKIRRVYLEPSNVEPMQEAVDALQEADLIVLGPGSLYTSVISNLCIEGISKAIISSQAPKLYISNIMTQPGETNDYDVYDHVKAIHQHAGEPFIDYVICSNDAFDEQILQRYKERNAHPVSTNKIKLTENNIKMITSKNLVEIYDHVFVRHNTKVLAKLVYDLALELTSTIQFKPKK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 167628 168614 . + . GCA_005502385.1_01409_mRNA GCA_005502385.1_01409 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKQLKVVLIGGGTGLSVLARGLREYPIDITAIVTVADDGGSTGKIRDEMSIPAPGDIRNVIAALSDAEPILEELFQYRFEEHQIEGHSLGNLLLAALTNIKNDFGHAVKELSKILNIKGKVIPSTNTNVMLNAVLEDGEIVKGESKIPKKNKKIRRVYLEPSNVEPMQEAVDALQEADLIVLGPGSLYTSVISNLCIEGISKAIISSQAPKLYISNIMTQPGETNDYDVYDHVKAIHQHAGEPFIDYVICSNDAFDEQILQRYKERNAHPVSTNKIKLTENNIKMITSKNLVEIYDHVFVRHNTKVLAKLVYDLALELTSTIQFKPKK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 167628 168614 . + 0 GCA_005502385.1_01409 GCA_005502385.1_01409_gene,GCA_005502385.1_01409_mRNA GCA_005502385.1_01409 Gluconeogenesis factor GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKQLKVVLIGGGTGLSVLARGLREYPIDITAIVTVADDGGSTGKIRDEMSIPAPGDIRNVIAALSDAEPILEELFQYRFEEHQIEGHSLGNLLLAALTNIKNDFGHAVKELSKILNIKGKVIPSTNTNVMLNAVLEDGEIVKGESKIPKKNKKIRRVYLEPSNVEPMQEAVDALQEADLIVLGPGSLYTSVISNLCIEGISKAIISSQAPKLYISNIMTQPGETNDYDVYDHVKAIHQHAGEPFIDYVICSNDAFDEQILQRYKERNAHPVSTNKIKLTENNIKMITSKNLVEIYDHVFVRHNTKVLAKLVYDLALELTSTIQFKPKK persistent 328 Gluconeogenesis factor UniRef50_A0A0U1MHM9,UniRef90_A0A657M0B3 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 168712 169656 . + . GCA_005502385.1_01410_gene GCA_005502385.1_01410 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSFASDMKNELTRIEVDESNAKAELSALIRMNGALSLSNQQFVINVQTENATTARRIYSLIKRIFNVEVEILVRKKMKLKKNNIYICRTKVRAKEILDELGILKNGIFVHDIDASMIKDDEMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQYEGHAEGLTKLMNSYGLNAKHLERKKGSISYLKEAEKISEFLSLIGGYQALLKFEDVRIVRDMRNSVNRLVNCETANLNKTVSAAMKQVQSIQLIDEEIGLDNLPDRLREIAKLRVEHQEISLKELGEMISNGPISKSGVNHRLRKLNELADKIRNGEKVEL . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 168712 169656 . + . GCA_005502385.1_01410_mRNA GCA_005502385.1_01410 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSFASDMKNELTRIEVDESNAKAELSALIRMNGALSLSNQQFVINVQTENATTARRIYSLIKRIFNVEVEILVRKKMKLKKNNIYICRTKVRAKEILDELGILKNGIFVHDIDASMIKDDEMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQYEGHAEGLTKLMNSYGLNAKHLERKKGSISYLKEAEKISEFLSLIGGYQALLKFEDVRIVRDMRNSVNRLVNCETANLNKTVSAAMKQVQSIQLIDEEIGLDNLPDRLREIAKLRVEHQEISLKELGEMISNGPISKSGVNHRLRKLNELADKIRNGEKVEL . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 168712 169656 . + 0 GCA_005502385.1_01410 GCA_005502385.1_01410_gene,GCA_005502385.1_01410_mRNA GCA_005502385.1_01410 putative cell division protein WhiA GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSFASDMKNELTRIEVDESNAKAELSALIRMNGALSLSNQQFVINVQTENATTARRIYSLIKRIFNVEVEILVRKKMKLKKNNIYICRTKVRAKEILDELGILKNGIFVHDIDASMIKDDEMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQYEGHAEGLTKLMNSYGLNAKHLERKKGSISYLKEAEKISEFLSLIGGYQALLKFEDVRIVRDMRNSVNRLVNCETANLNKTVSAAMKQVQSIQLIDEEIGLDNLPDRLREIAKLRVEHQEISLKELGEMISNGPISKSGVNHRLRKLNELADKIRNGEKVEL persistent 314 whiA DNA-binding protein WhiA GO:0003677,GO:0043937,GO:0051301 COG1481,K WP_019834952.1 UPI000360A905 UniRef100_A0A8I1BGS7,UniRef50_O06975,UniRef90_Q2G037 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 169723 169795 . - . GCA_005502385.1_01411_gene GCA_005502385.1_01411 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 169723 169795 . - . GCA_005502385.1_01411_mRNA GCA_005502385.1_01411 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 . . . . . . . GCA_005502385.1|SCOV01000003.1 Aragorn:001002 tRNA 169723 169795 . - . GCA_005502385.1_01411 GCA_005502385.1_01411_gene,GCA_005502385.1_01411_mRNA GCA_005502385.1_01411 tRNA-Arg(ccg) GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 169973 170560 . + . GCA_005502385.1_01412_gene GCA_005502385.1_01412 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGTKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILAERTGQSIERIQKDTDRDNFLTADEAKEYGLIDHVMQPEDM . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 169973 170560 . + . GCA_005502385.1_01412_mRNA GCA_005502385.1_01412 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGTKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILAERTGQSIERIQKDTDRDNFLTADEAKEYGLIDHVMQPEDM . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 169973 170560 . + 0 GCA_005502385.1_01412 GCA_005502385.1_01412_gene,GCA_005502385.1_01412_mRNA GCA_005502385.1_01412 ATP-dependent Clp protease proteolytic subunit GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGTKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILAERTGQSIERIQKDTDRDNFLTADEAKEYGLIDHVMQPEDM persistent 195 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP 3.4.21.92 GO:0004176,GO:0004252,GO:0005737,GO:0006508,GO:0006515,GO:0009368,GO:0051117 COG0740,O WP_017175911.1 UPI0002D98FBE UniRef100_A0A3S7GWU9,UniRef50_P80244,UniRef90_Q2G036 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 170613 170795 . - . GCA_005502385.1_01413_gene GCA_005502385.1_01413 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNDNKLTYILLLIASVFLILNGIFAFEKSIIMVLLSFFFIIIGLLLGFVAIHYLLKTKKP . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 170613 170795 . - . GCA_005502385.1_01413_mRNA GCA_005502385.1_01413 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNDNKLTYILLLIASVFLILNGIFAFEKSIIMVLLSFFFIIIGLLLGFVAIHYLLKTKKP . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 170613 170795 . - 0 GCA_005502385.1_01413 GCA_005502385.1_01413_gene,GCA_005502385.1_01413_mRNA GCA_005502385.1_01413 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNDNKLTYILLLIASVFLILNGIFAFEKSIIMVLLSFFFIIIGLLLGFVAIHYLLKTKKP persistent 60 lapA LapA family protein WP_002448125.1 UPI00019FC4FC UniRef100_A0A8X8KHM3,UniRef50_A0A8X8KHM3,UniRef90_A0A8X8KHM3 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 170813 171712 . - . GCA_005502385.1_01414_gene GCA_005502385.1_01414 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKQFLITGGTGMVGSHLVNEIKKREAHITILTRSDKQSDEPKITYVNWSKKGWENQVPDIDIVINLAGATLNKRWTSSYKQTIMTSRIQSTESLVHLFEQRQHKPEVLFNASALSYYPPSLHRTYTEQYQTLPFDFLSDVVYQWERFARRFENFGTRVVLGRFSMILSSEGGALQTMKLPYKFYVGGKLGSGRQWYSWIHIDDLVRAILFTIDESNAKGPFNMASPIPERQNLFGYTLGRTMHKPHETWVPSFIMRAVLGEMSTVVLDTQKVLPNKLEALGFNFRYNNLKVALEDLINE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 170813 171712 . - . GCA_005502385.1_01414_mRNA GCA_005502385.1_01414 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKQFLITGGTGMVGSHLVNEIKKREAHITILTRSDKQSDEPKITYVNWSKKGWENQVPDIDIVINLAGATLNKRWTSSYKQTIMTSRIQSTESLVHLFEQRQHKPEVLFNASALSYYPPSLHRTYTEQYQTLPFDFLSDVVYQWERFARRFENFGTRVVLGRFSMILSSEGGALQTMKLPYKFYVGGKLGSGRQWYSWIHIDDLVRAILFTIDESNAKGPFNMASPIPERQNLFGYTLGRTMHKPHETWVPSFIMRAVLGEMSTVVLDTQKVLPNKLEALGFNFRYNNLKVALEDLINE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 170813 171712 . - 0 GCA_005502385.1_01414 GCA_005502385.1_01414_gene,GCA_005502385.1_01414_mRNA GCA_005502385.1_01414 Epimerase family protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKQFLITGGTGMVGSHLVNEIKKREAHITILTRSDKQSDEPKITYVNWSKKGWENQVPDIDIVINLAGATLNKRWTSSYKQTIMTSRIQSTESLVHLFEQRQHKPEVLFNASALSYYPPSLHRTYTEQYQTLPFDFLSDVVYQWERFARRFENFGTRVVLGRFSMILSSEGGALQTMKLPYKFYVGGKLGSGRQWYSWIHIDDLVRAILFTIDESNAKGPFNMASPIPERQNLFGYTLGRTMHKPHETWVPSFIMRAVLGEMSTVVLDTQKVLPNKLEALGFNFRYNNLKVALEDLINE persistent 299 Epimerase WP_017175910.1 UPI0002F2D92D UniRef100_A0A3S7GU19,UniRef50_Q2G035,UniRef90_A0A3S7GU19 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 171986 172156 . - . GCA_005502385.1_01415_gene GCA_005502385.1_01415 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKDTFNTLFKHHSSNKIKSMMLSNDDFDESKNSKFDIFIGILIPIIILFLILFIK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 171986 172156 . - . GCA_005502385.1_01415_mRNA GCA_005502385.1_01415 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKDTFNTLFKHHSSNKIKSMMLSNDDFDESKNSKFDIFIGILIPIIILFLILFIK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 171986 172156 . - 0 GCA_005502385.1_01415 GCA_005502385.1_01415_gene,GCA_005502385.1_01415_mRNA GCA_005502385.1_01415 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKDTFNTLFKHHSSNKIKSMMLSNDDFDESKNSKFDIFIGILIPIIILFLILFIK persistent 56 hypothetical protein WP_002448117.1 UPI00019FC4FE UniRef100_A0A8X8GKI3,UniRef50_A0A8X8GKI3,UniRef90_A0A8X8GKI3 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 172344 173132 . + . GCA_005502385.1_01416_gene GCA_005502385.1_01416 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSKKNRNLKDYEAHEKKKMSGISKIISTLIVLLLLGGLVFAVFAFVDNSNRVNERLNNQSTEEHKDKKDKNTKSDKKNEEGTQENTTSENNTNNSKENKLDNVKNPNVTDNYSNEQNNSIKVQPTNQGKTAQTQQSSKETSTKQPNTNQIQSTQQKENAPTQEKENAPTQEKATQEETDKSTKNTQSSQSSRSNASTETSQHKSSNNDTTTTQERANTNQSSQTQKSTMQPSTAEPKTQSSSSTTSESKNNTQQSQRFSNEE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 172344 173132 . + . GCA_005502385.1_01416_mRNA GCA_005502385.1_01416 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSKKNRNLKDYEAHEKKKMSGISKIISTLIVLLLLGGLVFAVFAFVDNSNRVNERLNNQSTEEHKDKKDKNTKSDKKNEEGTQENTTSENNTNNSKENKLDNVKNPNVTDNYSNEQNNSIKVQPTNQGKTAQTQQSSKETSTKQPNTNQIQSTQQKENAPTQEKENAPTQEKATQEETDKSTKNTQSSQSSRSNASTETSQHKSSNNDTTTTQERANTNQSSQTQKSTMQPSTAEPKTQSSSSTTSESKNNTQQSQRFSNEE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 172344 173132 . + 0 GCA_005502385.1_01416 GCA_005502385.1_01416_gene,GCA_005502385.1_01416_mRNA GCA_005502385.1_01416 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSKKNRNLKDYEAHEKKKMSGISKIISTLIVLLLLGGLVFAVFAFVDNSNRVNERLNNQSTEEHKDKKDKNTKSDKKNEEGTQENTTSENNTNNSKENKLDNVKNPNVTDNYSNEQNNSIKVQPTNQGKTAQTQQSSKETSTKQPNTNQIQSTQQKENAPTQEKENAPTQEKATQEETDKSTKNTQSSQSSRSNASTETSQHKSSNNDTTTTQERANTNQSSQTQKSTMQPSTAEPKTQSSSSTTSESKNNTQQSQRFSNEE persistent 262 DUF4887 domain-containing protein WP_017175909.1 UPI0002EB8CB9 UniRef100_A0A8X8KGB5,UniRef50_A0A8X8KGB5,UniRef90_A0A8X8KGB5 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 173185 173412 . - . GCA_005502385.1_01417_gene GCA_005502385.1_01417 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKYKDNKDVEVLDPSDNRYKDDNYFKREQEYRDISEHHNTIRYHYGCGCPFGCFSSIFISIVLSIILTFLLNWIF . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 173185 173412 . - . GCA_005502385.1_01417_mRNA GCA_005502385.1_01417 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKYKDNKDVEVLDPSDNRYKDDNYFKREQEYRDISEHHNTIRYHYGCGCPFGCFSSIFISIVLSIILTFLLNWIF . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 173185 173412 . - 0 GCA_005502385.1_01417 GCA_005502385.1_01417_gene,GCA_005502385.1_01417_mRNA GCA_005502385.1_01417 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKYKDNKDVEVLDPSDNRYKDDNYFKREQEYRDISEHHNTIRYHYGCGCPFGCFSSIFISIVLSIILTFLLNWIF persistent 75 hypothetical protein WP_017175908.1 UPI000313E8FA UniRef100_A0A3S7GTZ8,UniRef50_Q4L4K1,UniRef90_A0A657M0A9 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 173680 174699 . + . GCA_005502385.1_01418_gene GCA_005502385.1_01418 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKDLIKLQQKLVPDLVDKMYRRFSILTTISNNEPVGRRSLSEHMDITERVLRTETDILKKQNLIQVKSTGMEITEEGTKVLNQLSDYFKVYKDDNHYAKHIKSNFGIKEVYVIPGNADMHEEVKSEMGRQAGHLLEDILYEDAIVSVTGGSTMANVSRAMHLLPFNVFFVPARGGLGENMVYQANTIAASMAQQSGGYYTTLYVPDNVSESTYNTLLMEPSVVHTLEKIKQANITIHGIGDALKMAHRRQSSDEVIERLQHHQAVGEAFGYYFDAQGHVVQKVKTIGLQLEDLESKEFIYAVAGGMSKGEAIKAYLSIAPKNTILITDEAAAKVILNKE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 173680 174699 . + . GCA_005502385.1_01418_mRNA GCA_005502385.1_01418 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKDLIKLQQKLVPDLVDKMYRRFSILTTISNNEPVGRRSLSEHMDITERVLRTETDILKKQNLIQVKSTGMEITEEGTKVLNQLSDYFKVYKDDNHYAKHIKSNFGIKEVYVIPGNADMHEEVKSEMGRQAGHLLEDILYEDAIVSVTGGSTMANVSRAMHLLPFNVFFVPARGGLGENMVYQANTIAASMAQQSGGYYTTLYVPDNVSESTYNTLLMEPSVVHTLEKIKQANITIHGIGDALKMAHRRQSSDEVIERLQHHQAVGEAFGYYFDAQGHVVQKVKTIGLQLEDLESKEFIYAVAGGMSKGEAIKAYLSIAPKNTILITDEAAAKVILNKE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 173680 174699 . + 0 GCA_005502385.1_01418 GCA_005502385.1_01418_gene,GCA_005502385.1_01418_mRNA GCA_005502385.1_01418 Central glycolytic genes regulator GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKDLIKLQQKLVPDLVDKMYRRFSILTTISNNEPVGRRSLSEHMDITERVLRTETDILKKQNLIQVKSTGMEITEEGTKVLNQLSDYFKVYKDDNHYAKHIKSNFGIKEVYVIPGNADMHEEVKSEMGRQAGHLLEDILYEDAIVSVTGGSTMANVSRAMHLLPFNVFFVPARGGLGENMVYQANTIAASMAQQSGGYYTTLYVPDNVSESTYNTLLMEPSVVHTLEKIKQANITIHGIGDALKMAHRRQSSDEVIERLQHHQAVGEAFGYYFDAQGHVVQKVKTIGLQLEDLESKEFIYAVAGGMSKGEAIKAYLSIAPKNTILITDEAAAKVILNKE persistent 339 Sugar-binding domain-containing protein WP_017175907.1 UPI00030D0C52 UniRef100_A0A3S7GTL0,UniRef50_A0A7V7VIG1,UniRef90_A0A8I0W8M5 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 174746 175753 . + . GCA_005502385.1_01419_gene GCA_005502385.1_01419 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAVKVAINGFGRIGRLAFRRIQDVEGIEVVAVNDLTDDEMLAHLLKYDTMQGRFNGDVEVVEGGFRVNGKEVKSFEEPDASKLPWGDLDIDVVLECTGFYTEKEKAEAHINAGAKKVLISAPAKGDVKTIVFNTNHKDLDGSETVVSGASCTTNSLAPVAKVLNDEFGIVEGLMTTIHAYTGDQMTQDGPHKKGDKRRARTAAQNIVPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTEVTVVLEKEVTVEDVNKAMKNAADESFGYTEDEIVSSDIVGMNFGSLFDATQTRVISVGDKQLVKVAAWYDNEMSYTSQLVRTLEYLAELTK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 174746 175753 . + . GCA_005502385.1_01419_mRNA GCA_005502385.1_01419 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAVKVAINGFGRIGRLAFRRIQDVEGIEVVAVNDLTDDEMLAHLLKYDTMQGRFNGDVEVVEGGFRVNGKEVKSFEEPDASKLPWGDLDIDVVLECTGFYTEKEKAEAHINAGAKKVLISAPAKGDVKTIVFNTNHKDLDGSETVVSGASCTTNSLAPVAKVLNDEFGIVEGLMTTIHAYTGDQMTQDGPHKKGDKRRARTAAQNIVPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTEVTVVLEKEVTVEDVNKAMKNAADESFGYTEDEIVSSDIVGMNFGSLFDATQTRVISVGDKQLVKVAAWYDNEMSYTSQLVRTLEYLAELTK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 174746 175753 . + 0 GCA_005502385.1_01419 GCA_005502385.1_01419_gene,GCA_005502385.1_01419_mRNA GCA_005502385.1_01419 Glyceraldehyde-3-phosphate dehydrogenase 1 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAVKVAINGFGRIGRLAFRRIQDVEGIEVVAVNDLTDDEMLAHLLKYDTMQGRFNGDVEVVEGGFRVNGKEVKSFEEPDASKLPWGDLDIDVVLECTGFYTEKEKAEAHINAGAKKVLISAPAKGDVKTIVFNTNHKDLDGSETVVSGASCTTNSLAPVAKVLNDEFGIVEGLMTTIHAYTGDQMTQDGPHKKGDKRRARTAAQNIVPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTEVTVVLEKEVTVEDVNKAMKNAADESFGYTEDEIVSSDIVGMNFGSLFDATQTRVISVGDKQLVKVAAWYDNEMSYTSQLVRTLEYLAELTK persistent 335 gap type I glyceraldehyde-3-phosphate dehydrogenase GO:0006006,GO:0016620,GO:0050661,GO:0051287 UniRef50_O52631,UniRef90_A0A1L8Y558 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 175899 177089 . + . GCA_005502385.1_01420_gene GCA_005502385.1_01420 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAKKIVSDLDLKGKVVLERADFNVPLKNGEITNDNRIVQALPTIKYILEQGGKLVLFSHLGKVKEESDKKELTLKPVADSLTEKLGKEVVFIPETRGEKLESAIKNLNEGDVLLVENTRFEDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHREHASNVGISTHLETAAGYLMEKEIKFIGGVVNDPHKPVVAILGGAKVSDKIGVIKNLVNIADKIIIGGGMAYTFLKAQGKEIGLSLLEEDKIDFAKELLEKNGDQIVLPVDCKVAKEFSNDAKITEVSIDEIPSDQEAMDIGPKTIELFTKELQGAHTVVWNGPMGVFEFSNFAKGTIGVCKAIANLEDAITIIGGGDSAAAAISLGFEDDFTHISTGGGASLEYLEGKELPGIKAINDK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 175899 177089 . + . GCA_005502385.1_01420_mRNA GCA_005502385.1_01420 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAKKIVSDLDLKGKVVLERADFNVPLKNGEITNDNRIVQALPTIKYILEQGGKLVLFSHLGKVKEESDKKELTLKPVADSLTEKLGKEVVFIPETRGEKLESAIKNLNEGDVLLVENTRFEDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHREHASNVGISTHLETAAGYLMEKEIKFIGGVVNDPHKPVVAILGGAKVSDKIGVIKNLVNIADKIIIGGGMAYTFLKAQGKEIGLSLLEEDKIDFAKELLEKNGDQIVLPVDCKVAKEFSNDAKITEVSIDEIPSDQEAMDIGPKTIELFTKELQGAHTVVWNGPMGVFEFSNFAKGTIGVCKAIANLEDAITIIGGGDSAAAAISLGFEDDFTHISTGGGASLEYLEGKELPGIKAINDK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 175899 177089 . + 0 GCA_005502385.1_01420 GCA_005502385.1_01420_gene,GCA_005502385.1_01420_mRNA GCA_005502385.1_01420 Phosphoglycerate kinase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAKKIVSDLDLKGKVVLERADFNVPLKNGEITNDNRIVQALPTIKYILEQGGKLVLFSHLGKVKEESDKKELTLKPVADSLTEKLGKEVVFIPETRGEKLESAIKNLNEGDVLLVENTRFEDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHREHASNVGISTHLETAAGYLMEKEIKFIGGVVNDPHKPVVAILGGAKVSDKIGVIKNLVNIADKIIIGGGMAYTFLKAQGKEIGLSLLEEDKIDFAKELLEKNGDQIVLPVDCKVAKEFSNDAKITEVSIDEIPSDQEAMDIGPKTIELFTKELQGAHTVVWNGPMGVFEFSNFAKGTIGVCKAIANLEDAITIIGGGDSAAAAISLGFEDDFTHISTGGGASLEYLEGKELPGIKAINDK persistent 396 pgk Phosphoglycerate kinase 2.7.2.3 GO:0004618,GO:0005524,GO:0005829,GO:0006094,GO:0006096,GO:0043531 COG0126,G WP_017175905.1 UPI0002D82093 UniRef100_A0A3S7GTM2,UniRef50_Q8Y4I2,UniRef90_Q4L4K4 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 177201 177962 . + . GCA_005502385.1_01421_gene GCA_005502385.1_01421 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRKPIIAGNWKMNKTVQEAKDFVNNLPTLPDEKEVESVICAPTIQLDALISLVNDGKAKGLKIGAQNTYFEDNGAYTGETSPVALADLGVKYVVIGHSERRELFHETDEDVNKKAHAVFNHGMTPIICVGETDEERENGKANEVVSNQVKEAVKGLSEDQLKEVVIAYEPIWAIGTGKSATSEDANEMCAQVRKTVADVSSQDVADATRIQYGGSVKPNNVKEYMAQSDIDGALVGGASLKVDDFVQLLEGAK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 177201 177962 . + . GCA_005502385.1_01421_mRNA GCA_005502385.1_01421 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRKPIIAGNWKMNKTVQEAKDFVNNLPTLPDEKEVESVICAPTIQLDALISLVNDGKAKGLKIGAQNTYFEDNGAYTGETSPVALADLGVKYVVIGHSERRELFHETDEDVNKKAHAVFNHGMTPIICVGETDEERENGKANEVVSNQVKEAVKGLSEDQLKEVVIAYEPIWAIGTGKSATSEDANEMCAQVRKTVADVSSQDVADATRIQYGGSVKPNNVKEYMAQSDIDGALVGGASLKVDDFVQLLEGAK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 177201 177962 . + 0 GCA_005502385.1_01421 GCA_005502385.1_01421_gene,GCA_005502385.1_01421_mRNA GCA_005502385.1_01421 Triosephosphate isomerase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MRKPIIAGNWKMNKTVQEAKDFVNNLPTLPDEKEVESVICAPTIQLDALISLVNDGKAKGLKIGAQNTYFEDNGAYTGETSPVALADLGVKYVVIGHSERRELFHETDEDVNKKAHAVFNHGMTPIICVGETDEERENGKANEVVSNQVKEAVKGLSEDQLKEVVIAYEPIWAIGTGKSATSEDANEMCAQVRKTVADVSSQDVADATRIQYGGSVKPNNVKEYMAQSDIDGALVGGASLKVDDFVQLLEGAK persistent 253 tpiA triose-phosphate isomerase 5.3.1.1 GO:0004807,GO:0005829,GO:0006094,GO:0006096,GO:0019563,GO:0046166 COG0149,G WP_017175904.1 UPI0002D6C0E9 UniRef100_A0A1J6E384,UniRef50_P00943,UniRef90_Q4L4K5 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 177965 179482 . + . GCA_005502385.1_01422_gene GCA_005502385.1_01422 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAKQPTALIILDGFANRESEHGNAVKQAHKPNFDRYYNKYPTTQIEASGLDVGLPEGQMGNSEVGHMNIGAGRIVYQSLTRINKSIEDGDFYENEVLGKAAQHVKDHDSALHVFGLLSDGGVHSHYKHLFALLELAKQKGLDKVYVHAFLDGRDVDQKSAIKYIEETEAKFKELGVGQFASISGRYYAMDRDKRWDREEKAYNAIRNFEGPSYANAKEGVEANYANDVTDEFVEPFIVEGQNEGVQDGDAVIFFNFRPDRAAQLSEIFTNKAFDGFKVERVNDLFYATFTKYNDNVDAEVVFEKVDLTNTIGEVAQNNNLKQLRIAETEKYPHVTYFMSGGRNEEFEGERRRLIDSPKVATYDLKPEMSAYEVKDTLLEELDKGDLDLIILNFANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKILDMNGYAIITADHGNSDQVLTDDDQPMTTHTTNPVPVIVTKEDVTLRETGRLGDLAPTLLDLLNVDQPSDMTGESLIKH . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 177965 179482 . + . GCA_005502385.1_01422_mRNA GCA_005502385.1_01422 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAKQPTALIILDGFANRESEHGNAVKQAHKPNFDRYYNKYPTTQIEASGLDVGLPEGQMGNSEVGHMNIGAGRIVYQSLTRINKSIEDGDFYENEVLGKAAQHVKDHDSALHVFGLLSDGGVHSHYKHLFALLELAKQKGLDKVYVHAFLDGRDVDQKSAIKYIEETEAKFKELGVGQFASISGRYYAMDRDKRWDREEKAYNAIRNFEGPSYANAKEGVEANYANDVTDEFVEPFIVEGQNEGVQDGDAVIFFNFRPDRAAQLSEIFTNKAFDGFKVERVNDLFYATFTKYNDNVDAEVVFEKVDLTNTIGEVAQNNNLKQLRIAETEKYPHVTYFMSGGRNEEFEGERRRLIDSPKVATYDLKPEMSAYEVKDTLLEELDKGDLDLIILNFANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKILDMNGYAIITADHGNSDQVLTDDDQPMTTHTTNPVPVIVTKEDVTLRETGRLGDLAPTLLDLLNVDQPSDMTGESLIKH . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 177965 179482 . + 0 GCA_005502385.1_01422 GCA_005502385.1_01422_gene,GCA_005502385.1_01422_mRNA GCA_005502385.1_01422 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAKQPTALIILDGFANRESEHGNAVKQAHKPNFDRYYNKYPTTQIEASGLDVGLPEGQMGNSEVGHMNIGAGRIVYQSLTRINKSIEDGDFYENEVLGKAAQHVKDHDSALHVFGLLSDGGVHSHYKHLFALLELAKQKGLDKVYVHAFLDGRDVDQKSAIKYIEETEAKFKELGVGQFASISGRYYAMDRDKRWDREEKAYNAIRNFEGPSYANAKEGVEANYANDVTDEFVEPFIVEGQNEGVQDGDAVIFFNFRPDRAAQLSEIFTNKAFDGFKVERVNDLFYATFTKYNDNVDAEVVFEKVDLTNTIGEVAQNNNLKQLRIAETEKYPHVTYFMSGGRNEEFEGERRRLIDSPKVATYDLKPEMSAYEVKDTLLEELDKGDLDLIILNFANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKILDMNGYAIITADHGNSDQVLTDDDQPMTTHTTNPVPVIVTKEDVTLRETGRLGDLAPTLLDLLNVDQPSDMTGESLIKH persistent 505 gpmI 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 5.4.2.12 GO:0005829,GO:0006007,GO:0006096,GO:0030145,GO:0046537 COG0696,G WP_019835815.1 UPI0003658117 UniRef100_UPI0003658117,UniRef50_P64269,UniRef90_Q5HQV1 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 179601 180905 . + . GCA_005502385.1_01423_gene GCA_005502385.1_01423 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MPIITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYSGKGVTKAVENVNEIIAPEIVEGEFSVLDQVSIDKMMIQLDGTPNKGKLGANAILGVSIAVARAAADLLGQPLYKYFGGFNGKQLPVPMMNIVNGGSHSDAPIAFQEFMILPTGAESFKEALRWGAEIFHNLKSILSERGLETAVGDEGGFAPRFDGTEDAVETIIKAIEKAGYKPGEDVFLGFDCASSEFYENGVYDYTKFEGEHGAKRSAAEQVDYLEELISKYPIITIEDGMDENDWDGWKQLTDRIGDKVQLVGDDLFVTNTEILSRGIEQGIGNSILIKVNQIGTLTETFDAIEMAQKAGYTAVVSHRSGETEDTTIADIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDELFETAKFDGIKSFYNLDK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 179601 180905 . + . GCA_005502385.1_01423_mRNA GCA_005502385.1_01423 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MPIITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYSGKGVTKAVENVNEIIAPEIVEGEFSVLDQVSIDKMMIQLDGTPNKGKLGANAILGVSIAVARAAADLLGQPLYKYFGGFNGKQLPVPMMNIVNGGSHSDAPIAFQEFMILPTGAESFKEALRWGAEIFHNLKSILSERGLETAVGDEGGFAPRFDGTEDAVETIIKAIEKAGYKPGEDVFLGFDCASSEFYENGVYDYTKFEGEHGAKRSAAEQVDYLEELISKYPIITIEDGMDENDWDGWKQLTDRIGDKVQLVGDDLFVTNTEILSRGIEQGIGNSILIKVNQIGTLTETFDAIEMAQKAGYTAVVSHRSGETEDTTIADIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDELFETAKFDGIKSFYNLDK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 179601 180905 . + 0 GCA_005502385.1_01423 GCA_005502385.1_01423_gene,GCA_005502385.1_01423_mRNA GCA_005502385.1_01423 Enolase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MPIITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYSGKGVTKAVENVNEIIAPEIVEGEFSVLDQVSIDKMMIQLDGTPNKGKLGANAILGVSIAVARAAADLLGQPLYKYFGGFNGKQLPVPMMNIVNGGSHSDAPIAFQEFMILPTGAESFKEALRWGAEIFHNLKSILSERGLETAVGDEGGFAPRFDGTEDAVETIIKAIEKAGYKPGEDVFLGFDCASSEFYENGVYDYTKFEGEHGAKRSAAEQVDYLEELISKYPIITIEDGMDENDWDGWKQLTDRIGDKVQLVGDDLFVTNTEILSRGIEQGIGNSILIKVNQIGTLTETFDAIEMAQKAGYTAVVSHRSGETEDTTIADIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDELFETAKFDGIKSFYNLDK persistent 434 eno phosphopyruvate hydratase 4.2.1.11 GO:0000015,GO:0000287,GO:0004634,GO:0005576,GO:0006096,GO:0009986 COG0148,G WP_002448208.1 UPI00019FC506 UniRef100_A0A2A1MC93,UniRef50_Q97QS2,UniRef90_O69174 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 181079 181549 . + . GCA_005502385.1_01424_gene GCA_005502385.1_01424 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDQQLNQSNKRERITGQLIGYSSLVFCILLIIHNFIALDARTAKTLLTLAHQKASSSAVNNILNSFRYTGIMYILAYLAGVIALWNRHKYLWWFMFAVYVSNVLFTLVNLTMVLNAIIETKSVLFILPILIVVIGSAILAIYMLIISIVRKSTFNR . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 181079 181549 . + . GCA_005502385.1_01424_mRNA GCA_005502385.1_01424 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDQQLNQSNKRERITGQLIGYSSLVFCILLIIHNFIALDARTAKTLLTLAHQKASSSAVNNILNSFRYTGIMYILAYLAGVIALWNRHKYLWWFMFAVYVSNVLFTLVNLTMVLNAIIETKSVLFILPILIVVIGSAILAIYMLIISIVRKSTFNR . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 181079 181549 . + 0 GCA_005502385.1_01424 GCA_005502385.1_01424_gene,GCA_005502385.1_01424_mRNA GCA_005502385.1_01424 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDQQLNQSNKRERITGQLIGYSSLVFCILLIIHNFIALDARTAKTLLTLAHQKASSSAVNNILNSFRYTGIMYILAYLAGVIALWNRHKYLWWFMFAVYVSNVLFTLVNLTMVLNAIIETKSVLFILPILIVVIGSAILAIYMLIISIVRKSTFNR persistent 156 DUF2127 domain-containing protein WP_019835816.1 UPI0003755293 UniRef100_UPI0003755293,UniRef50_Q2G027,UniRef90_A0A3S7GTZ1 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 181617 181850 . + . GCA_005502385.1_01425_gene GCA_005502385.1_01425 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MHTLFMVLLIIDCIALITVVLLQESKSNGLSGAISGGAEQLFGKQKQRGVDLFLHRLTIVLAIIFFLIMIGISYFGL . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 181617 181850 . + . GCA_005502385.1_01425_mRNA GCA_005502385.1_01425 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MHTLFMVLLIIDCIALITVVLLQESKSNGLSGAISGGAEQLFGKQKQRGVDLFLHRLTIVLAIIFFLIMIGISYFGL . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 181617 181850 . + 0 GCA_005502385.1_01425 GCA_005502385.1_01425_gene,GCA_005502385.1_01425_mRNA GCA_005502385.1_01425 putative protein-export membrane protein SecG GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MHTLFMVLLIIDCIALITVVLLQESKSNGLSGAISGGAEQLFGKQKQRGVDLFLHRLTIVLAIIFFLIMIGISYFGL persistent 77 secG preprotein translocase subunit SecG GO:0005886,GO:0009306,GO:0015136,GO:0015450,GO:0015739,GO:0016020,GO:0043952,GO:0065002 COG1314,U WP_002448159.1 UPI00019FC508 UniRef100_A0A1L8Y556,UniRef50_Q49W06,UniRef90_Q4L4K9 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 182056 182796 . + . GCA_005502385.1_01426_gene GCA_005502385.1_01426 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MQIKLPQPFFFQEGKRAVLLLHGFTGNSSDVRQLGRFLQKKGYTSYAPQYEGHAAPPEEILKSSPYVWFKDVLDGYDYLVEQGYEDIAVAGLSLGGVFALKLSLNRPVKGIITMCAPAEVKTEGTIYEGFLEYARNFKKYEGKDQATIDKEMEDFHPTETLKELSDTLSRVRNDVDEVLDPILVVQAEKDEMIDPQSANYIYENVDSDEKQIKWYANSGHVITIDKEKEQVFEDVYAFLEGLDWSE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 182056 182796 . + . GCA_005502385.1_01426_mRNA GCA_005502385.1_01426 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MQIKLPQPFFFQEGKRAVLLLHGFTGNSSDVRQLGRFLQKKGYTSYAPQYEGHAAPPEEILKSSPYVWFKDVLDGYDYLVEQGYEDIAVAGLSLGGVFALKLSLNRPVKGIITMCAPAEVKTEGTIYEGFLEYARNFKKYEGKDQATIDKEMEDFHPTETLKELSDTLSRVRNDVDEVLDPILVVQAEKDEMIDPQSANYIYENVDSDEKQIKWYANSGHVITIDKEKEQVFEDVYAFLEGLDWSE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 182056 182796 . + 0 GCA_005502385.1_01426 GCA_005502385.1_01426_gene,GCA_005502385.1_01426_mRNA GCA_005502385.1_01426 Carboxylesterase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MQIKLPQPFFFQEGKRAVLLLHGFTGNSSDVRQLGRFLQKKGYTSYAPQYEGHAAPPEEILKSSPYVWFKDVLDGYDYLVEQGYEDIAVAGLSLGGVFALKLSLNRPVKGIITMCAPAEVKTEGTIYEGFLEYARNFKKYEGKDQATIDKEMEDFHPTETLKELSDTLSRVRNDVDEVLDPILVVQAEKDEMIDPQSANYIYENVDSDEKQIKWYANSGHVITIDKEKEQVFEDVYAFLEGLDWSE persistent 246 yvaK Serine aminopeptidase S33 domain-containing protein COG1647,Q WP_017175900.1 UPI000314E9E4 UniRef100_A0A8X8GT63,UniRef50_Q2G025,UniRef90_Q4L4L0 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 182834 185212 . + . GCA_005502385.1_01427_gene GCA_005502385.1_01427 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNLKQSIEEIVKQPDYEPMSVSDFQDALGLSSADSFRELIKVLVELEQAGLVERTKTDRYQRKVSNKNLSSKLIRGTLSQNKKGFAFLRPENEELEDIFIPPTKINRALDGDTVIVELQKSRGEHRGKVEGEVKSIEKHSVTQVVGTYSEAKHFGFVIPDDKRIMQDIFIPKGQSLGAVDGHKVLVQITKYADGTDNPEGHVSAILGHKNDPGVDILSIIYQHGIEIEFPDEVLKEAESVPEEIKPEEIKGRRDLRNDLTITIDGADAKDLDDAISVKRLDNGHTELTVSIADVSYYVKEGSALDKEAYDRATSVYLVDRVIPMIPHRLSNGICSLNPEVDRLTLSCRMEINERGEVVNHDIFDSVIHSNYRMTYDAVNQIITEKNTEVRQQYSEIVPMLDLAQDLSNRLIRMRKRRGEIDFDINEAKVLVNQEGLPTDVILRERGEGERLIESFMLAANETVAEHFNKLEVPFIYRVHEQPKSDRLRQFFDFITNFGIMVKGTGEDIHPSTLQSIQEEVEGRSEQMVISTMMLRSMQQAHYDDTNLGHFGLSAEYYTHFTSPIRRYPDLTVHRLIRKYLVDHSMNHKEMHKWEETLPELAEHTSQRERRAIEAERDTDELKKAEYMIQHIGDEFEGIVSSVANFGMFVELPNTIEGMVHISNMTDDYYQFDERQMALIGERHAKVFRIGDEVKVKVTHVDVDERMIDFQIVGMPLPKNDKSQRPARGKTIQAKTRGKSLDKSKDNHHKNKKKKRKQRKGKNQRQRDKQSATKHKPFYKDKNIKKKARRKKK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 182834 185212 . + . GCA_005502385.1_01427_mRNA GCA_005502385.1_01427 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNLKQSIEEIVKQPDYEPMSVSDFQDALGLSSADSFRELIKVLVELEQAGLVERTKTDRYQRKVSNKNLSSKLIRGTLSQNKKGFAFLRPENEELEDIFIPPTKINRALDGDTVIVELQKSRGEHRGKVEGEVKSIEKHSVTQVVGTYSEAKHFGFVIPDDKRIMQDIFIPKGQSLGAVDGHKVLVQITKYADGTDNPEGHVSAILGHKNDPGVDILSIIYQHGIEIEFPDEVLKEAESVPEEIKPEEIKGRRDLRNDLTITIDGADAKDLDDAISVKRLDNGHTELTVSIADVSYYVKEGSALDKEAYDRATSVYLVDRVIPMIPHRLSNGICSLNPEVDRLTLSCRMEINERGEVVNHDIFDSVIHSNYRMTYDAVNQIITEKNTEVRQQYSEIVPMLDLAQDLSNRLIRMRKRRGEIDFDINEAKVLVNQEGLPTDVILRERGEGERLIESFMLAANETVAEHFNKLEVPFIYRVHEQPKSDRLRQFFDFITNFGIMVKGTGEDIHPSTLQSIQEEVEGRSEQMVISTMMLRSMQQAHYDDTNLGHFGLSAEYYTHFTSPIRRYPDLTVHRLIRKYLVDHSMNHKEMHKWEETLPELAEHTSQRERRAIEAERDTDELKKAEYMIQHIGDEFEGIVSSVANFGMFVELPNTIEGMVHISNMTDDYYQFDERQMALIGERHAKVFRIGDEVKVKVTHVDVDERMIDFQIVGMPLPKNDKSQRPARGKTIQAKTRGKSLDKSKDNHHKNKKKKRKQRKGKNQRQRDKQSATKHKPFYKDKNIKKKARRKKK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 182834 185212 . + 0 GCA_005502385.1_01427 GCA_005502385.1_01427_gene,GCA_005502385.1_01427_mRNA GCA_005502385.1_01427 Ribonuclease R GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNLKQSIEEIVKQPDYEPMSVSDFQDALGLSSADSFRELIKVLVELEQAGLVERTKTDRYQRKVSNKNLSSKLIRGTLSQNKKGFAFLRPENEELEDIFIPPTKINRALDGDTVIVELQKSRGEHRGKVEGEVKSIEKHSVTQVVGTYSEAKHFGFVIPDDKRIMQDIFIPKGQSLGAVDGHKVLVQITKYADGTDNPEGHVSAILGHKNDPGVDILSIIYQHGIEIEFPDEVLKEAESVPEEIKPEEIKGRRDLRNDLTITIDGADAKDLDDAISVKRLDNGHTELTVSIADVSYYVKEGSALDKEAYDRATSVYLVDRVIPMIPHRLSNGICSLNPEVDRLTLSCRMEINERGEVVNHDIFDSVIHSNYRMTYDAVNQIITEKNTEVRQQYSEIVPMLDLAQDLSNRLIRMRKRRGEIDFDINEAKVLVNQEGLPTDVILRERGEGERLIESFMLAANETVAEHFNKLEVPFIYRVHEQPKSDRLRQFFDFITNFGIMVKGTGEDIHPSTLQSIQEEVEGRSEQMVISTMMLRSMQQAHYDDTNLGHFGLSAEYYTHFTSPIRRYPDLTVHRLIRKYLVDHSMNHKEMHKWEETLPELAEHTSQRERRAIEAERDTDELKKAEYMIQHIGDEFEGIVSSVANFGMFVELPNTIEGMVHISNMTDDYYQFDERQMALIGERHAKVFRIGDEVKVKVTHVDVDERMIDFQIVGMPLPKNDKSQRPARGKTIQAKTRGKSLDKSKDNHHKNKKKKRKQRKGKNQRQRDKQSATKHKPFYKDKNIKKKARRKKK persistent 792 rnr ribonuclease R 3.1.13.1 GO:0003723,GO:0004518 COG0557,K WP_019835817.1 UPI000373EA47 UniRef100_UPI000373EA47,UniRef50_Q4L4L1,UniRef90_Q4L4L1 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 185237 185707 . + . GCA_005502385.1_01428_gene GCA_005502385.1_01428 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAKKKTKSPGTLAENRKARHDYNIEDTIEAGIALQGTEIKSIRRGSANLKDSYAQVKRGEMYINNMHIAPYEEGNRFNHDPLRSRKLLLHKKEIIKLGERTREIGYSIIPLKLYLKHGQCKVLLGIARGKKLHDKRQALKDKAMKRDVDRAMKARY . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 185237 185707 . + . GCA_005502385.1_01428_mRNA GCA_005502385.1_01428 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAKKKTKSPGTLAENRKARHDYNIEDTIEAGIALQGTEIKSIRRGSANLKDSYAQVKRGEMYINNMHIAPYEEGNRFNHDPLRSRKLLLHKKEIIKLGERTREIGYSIIPLKLYLKHGQCKVLLGIARGKKLHDKRQALKDKAMKRDVDRAMKARY . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 185237 185707 . + 0 GCA_005502385.1_01428 GCA_005502385.1_01428_gene,GCA_005502385.1_01428_mRNA GCA_005502385.1_01428 SsrA-binding protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAKKKTKSPGTLAENRKARHDYNIEDTIEAGIALQGTEIKSIRRGSANLKDSYAQVKRGEMYINNMHIAPYEEGNRFNHDPLRSRKLLLHKKEIIKLGERTREIGYSIIPLKLYLKHGQCKVLLGIARGKKLHDKRQALKDKAMKRDVDRAMKARY persistent 156 smpB SsrA-binding protein SmpB GO:0003723,GO:0005829,GO:0070929 COG0691,O WP_017175898.1 UPI00030C179A UniRef100_A0A4Q9WRW8,UniRef50_A8FHG7,UniRef90_Q5HQU5 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 185794 186152 . + . GCA_005502385.1_01429_gene GCA_005502385.1_01429 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 185794 186152 . + . GCA_005502385.1_01429_mRNA GCA_005502385.1_01429 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 . . . . . . . GCA_005502385.1|SCOV01000003.1 Aragorn:001002 tmRNA 185794 186152 . + . GCA_005502385.1_01429 GCA_005502385.1_01429_gene,GCA_005502385.1_01429_mRNA GCA_005502385.1_01429 transfer-messenger RNA%2C SsrA GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 186368 186520 . - . GCA_005502385.1_01430_gene GCA_005502385.1_01430 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLLFPSSIFMILLGNLIIKNPPKKINRFYGFRTKKSIKTQHNWDKGQIDS . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 186368 186520 . - . GCA_005502385.1_01430_mRNA GCA_005502385.1_01430 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLLFPSSIFMILLGNLIIKNPPKKINRFYGFRTKKSIKTQHNWDKGQIDS . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 186368 186520 . - 0 GCA_005502385.1_01430 GCA_005502385.1_01430_gene,GCA_005502385.1_01430_mRNA GCA_005502385.1_01430 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLLFPSSIFMILLGNLIIKNPPKKINRFYGFRTKKSIKTQHNWDKGQIDS shell 50 hypothetical protein . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 186928 187869 . + . GCA_005502385.1_01431_gene GCA_005502385.1_01431 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNNQSKYFHHVEHRKFQSSSKATLWSSLIITLIFTIVEFVGGLYANSLALLSDSFHMLSDVLALGLSMLAIYFASKPPTKHYTYGFLRLEIIVAFLNGLALIVISLGIMYEGILRIIHPEPVASGIMIFVAVLGLIINIILTLILFRSLRKEDNVNIQSALWHFFGDLLNSIGVIVAVVLIHFTGWEIIDPIISIIISLIILNGGYKIIKNAWKVLMESIPDGYDSDEIINAMKSVEGVIDVHEFHLWSITTNHSSLSAHVVLSDEYTKWPYSTVNKVSELLKEKYNLEHVTLQIENIHLNHLDEDYFKQYEE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 186928 187869 . + . GCA_005502385.1_01431_mRNA GCA_005502385.1_01431 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNNQSKYFHHVEHRKFQSSSKATLWSSLIITLIFTIVEFVGGLYANSLALLSDSFHMLSDVLALGLSMLAIYFASKPPTKHYTYGFLRLEIIVAFLNGLALIVISLGIMYEGILRIIHPEPVASGIMIFVAVLGLIINIILTLILFRSLRKEDNVNIQSALWHFFGDLLNSIGVIVAVVLIHFTGWEIIDPIISIIISLIILNGGYKIIKNAWKVLMESIPDGYDSDEIINAMKSVEGVIDVHEFHLWSITTNHSSLSAHVVLSDEYTKWPYSTVNKVSELLKEKYNLEHVTLQIENIHLNHLDEDYFKQYEE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 186928 187869 . + 0 GCA_005502385.1_01431 GCA_005502385.1_01431_gene,GCA_005502385.1_01431_mRNA GCA_005502385.1_01431 Cadmium%2C cobalt and zinc/H(+)-K(+) antiporter GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNNQSKYFHHVEHRKFQSSSKATLWSSLIITLIFTIVEFVGGLYANSLALLSDSFHMLSDVLALGLSMLAIYFASKPPTKHYTYGFLRLEIIVAFLNGLALIVISLGIMYEGILRIIHPEPVASGIMIFVAVLGLIINIILTLILFRSLRKEDNVNIQSALWHFFGDLLNSIGVIVAVVLIHFTGWEIIDPIISIIISLIILNGGYKIIKNAWKVLMESIPDGYDSDEIINAMKSVEGVIDVHEFHLWSITTNHSSLSAHVVLSDEYTKWPYSTVNKVSELLKEKYNLEHVTLQIENIHLNHLDEDYFKQYEE persistent 313 Cation transporter UniRef50_Q2G1I9,UniRef90_A0A6N0I3C1 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 187924 188100 . - . GCA_005502385.1_01432_gene GCA_005502385.1_01432 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKLALLTLSSFLVLGACSHSNDTVKDVNESAHKKNNPKAHKSKGNSERVDSKKINKN . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 187924 188100 . - . GCA_005502385.1_01432_mRNA GCA_005502385.1_01432 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKLALLTLSSFLVLGACSHSNDTVKDVNESAHKKNNPKAHKSKGNSERVDSKKINKN . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 187924 188100 . - 0 GCA_005502385.1_01432 GCA_005502385.1_01432_gene,GCA_005502385.1_01432_mRNA GCA_005502385.1_01432 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKKLALLTLSSFLVLGACSHSNDTVKDVNESAHKKNNPKAHKSKGNSERVDSKKINKN persistent 58 Lipoprotein WP_019835718.1 UPI000382C1E7 UniRef100_UPI000382C1E7,UniRef50_A0A8X8KGC0,UniRef90_A0A8X8KGC0 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 188236 188940 . - . GCA_005502385.1_01433_gene GCA_005502385.1_01433 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDNIIFYLGITLFLIACIVIIFGIIAIFKNKNYLKMLAMAIIIILLSMLALGIHKVIESNNPSKSDITPVKKEKPKDNKTNKENNNKKDNNSKKDHKDTSNESIQDTPATQENTPATEEHSIQSSESPTTQQENPTTEQNNATTNNQNSTQRHQEPSTHQQDTSQYQTNSANNDLKQTNSTQTQNSQNSTQYNHTNESNTTKNNTNNVNQNSTSNTTQNTQSGNTNNNINQINN . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 188236 188940 . - . GCA_005502385.1_01433_mRNA GCA_005502385.1_01433 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDNIIFYLGITLFLIACIVIIFGIIAIFKNKNYLKMLAMAIIIILLSMLALGIHKVIESNNPSKSDITPVKKEKPKDNKTNKENNNKKDNNSKKDHKDTSNESIQDTPATQENTPATEEHSIQSSESPTTQQENPTTEQNNATTNNQNSTQRHQEPSTHQQDTSQYQTNSANNDLKQTNSTQTQNSQNSTQYNHTNESNTTKNNTNNVNQNSTSNTTQNTQSGNTNNNINQINN . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 188236 188940 . - 0 GCA_005502385.1_01433 GCA_005502385.1_01433_gene,GCA_005502385.1_01433_mRNA GCA_005502385.1_01433 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDNIIFYLGITLFLIACIVIIFGIIAIFKNKNYLKMLAMAIIIILLSMLALGIHKVIESNNPSKSDITPVKKEKPKDNKTNKENNNKKDNNSKKDHKDTSNESIQDTPATQENTPATEEHSIQSSESPTTQQENPTTEQNNATTNNQNSTQRHQEPSTHQQDTSQYQTNSANNDLKQTNSTQTQNSQNSTQYNHTNESNTTKNNTNNVNQNSTSNTTQNTQSGNTNNNINQINN persistent 234 hypothetical protein WP_017175892.1 UPI00031B6864 UniRef100_A0A3S7GWR0,UniRef50_A0A6N0I3L3,UniRef90_A0A6N0I3L3 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 189073 189300 . - . GCA_005502385.1_01434_gene GCA_005502385.1_01434 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNHWKINNMTNRNLLIQQNENDVSIVEPLNNGSFKILSEFKLNTPSLPINTYDDQLYVSINFKNEEINIYNKSNE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 189073 189300 . - . GCA_005502385.1_01434_mRNA GCA_005502385.1_01434 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNHWKINNMTNRNLLIQQNENDVSIVEPLNNGSFKILSEFKLNTPSLPINTYDDQLYVSINFKNEEINIYNKSNE . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 189073 189300 . - 0 GCA_005502385.1_01434 GCA_005502385.1_01434_gene,GCA_005502385.1_01434_mRNA GCA_005502385.1_01434 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNHWKINNMTNRNLLIQQNENDVSIVEPLNNGSFKILSEFKLNTPSLPINTYDDQLYVSINFKNEEINIYNKSNE persistent 75 hypothetical protein WP_019835716.1 UPI000367AD03 UniRef100_UPI000367AD03,UniRef50_Q5HQT0,UniRef90_A0A657M092 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 189456 189740 . - . GCA_005502385.1_01435_gene GCA_005502385.1_01435 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDELTNEQKYTVAKFYKLYMERSNSGQTEEEANNFKDSITAQDDYFCDRKYSDFLENCKVLIDHGYLDGNIMSDRIYNIKVTNKAFTEIEQSFN . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 189456 189740 . - . GCA_005502385.1_01435_mRNA GCA_005502385.1_01435 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDELTNEQKYTVAKFYKLYMERSNSGQTEEEANNFKDSITAQDDYFCDRKYSDFLENCKVLIDHGYLDGNIMSDRIYNIKVTNKAFTEIEQSFN . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 189456 189740 . - 0 GCA_005502385.1_01435 GCA_005502385.1_01435_gene,GCA_005502385.1_01435_mRNA GCA_005502385.1_01435 hypothetical protein """""" GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MDELTNEQKYTVAKFYKLYMERSNSGQTEEEANNFKDSITAQDDYFCDRKYSDFLENCKVLIDHGYLDGNIMSDRIYNIKVTNKAFTEIEQSFN persistent 94 Phage protein WP_019835715.1 UPI00037F8337 UniRef100_UPI00037F8337,UniRef50_Q2G007,UniRef90_A0A657M221 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 189817 190563 . - . GCA_005502385.1_01436_gene GCA_005502385.1_01436 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKNKKLNYRFFYYIFLTLIIILFILFFLYFYKHFDLKQNQSLDYYANFNDLKQHTTKNKDWKIITKHRKHSDTLITAIHGGSIEPGTTELARRISNIGQYNFYSFEGLRSDNNAQLHITSTVFDEPQLLDMLNHSSKTVSIHGYAGDEPIVYVGGKNKKLVQTLRHSLTDYGFTVQKTPKGIEALSNNNIINRDKKDTGVQLELTTRQRALFFKHNNLDKNNRRSPKNYTRTFYRFAEAVDQGIKKAQ . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 189817 190563 . - . GCA_005502385.1_01436_mRNA GCA_005502385.1_01436 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKNKKLNYRFFYYIFLTLIIILFILFFLYFYKHFDLKQNQSLDYYANFNDLKQHTTKNKDWKIITKHRKHSDTLITAIHGGSIEPGTTELARRISNIGQYNFYSFEGLRSDNNAQLHITSTVFDEPQLLDMLNHSSKTVSIHGYAGDEPIVYVGGKNKKLVQTLRHSLTDYGFTVQKTPKGIEALSNNNIINRDKKDTGVQLELTTRQRALFFKHNNLDKNNRRSPKNYTRTFYRFAEAVDQGIKKAQ . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 189817 190563 . - 0 GCA_005502385.1_01436 GCA_005502385.1_01436_gene,GCA_005502385.1_01436_mRNA GCA_005502385.1_01436 hypothetical protein UPF0714 protein YmaC GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKNKKLNYRFFYYIFLTLIIILFILFFLYFYKHFDLKQNQSLDYYANFNDLKQHTTKNKDWKIITKHRKHSDTLITAIHGGSIEPGTTELARRISNIGQYNFYSFEGLRSDNNAQLHITSTVFDEPQLLDMLNHSSKTVSIHGYAGDEPIVYVGGKNKKLVQTLRHSLTDYGFTVQKTPKGIEALSNNNIINRDKKDTGVQLELTTRQRALFFKHNNLDKNNRRSPKNYTRTFYRFAEAVDQGIKKAQ persistent 248 Phage-related replication protein WP_019835714.1 UPI000364BB6B UniRef100_UPI000364BB6B,UniRef50_Q5HQS8,UniRef90_A0A974L244 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 190637 191218 . - . GCA_005502385.1_01437_gene GCA_005502385.1_01437 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKTIQLKRIIFVIFTSLLFFAFPSHTYASISSTSSSSGKGNDFKLQPGDIILTKGPVLFGFFGHSSIALDHDTVLQIEGPGDKPITESFESFKQRFGVKKNDWIKIYRCEYPNAGQKAADWAKAHYKNSDKTYLVTLNLKSERFTYCTKIIYQAYKYGVSKDTINDHGLLIISPYALVDNFNNDYRLKLVKTY . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 190637 191218 . - . GCA_005502385.1_01437_mRNA GCA_005502385.1_01437 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKTIQLKRIIFVIFTSLLFFAFPSHTYASISSTSSSSGKGNDFKLQPGDIILTKGPVLFGFFGHSSIALDHDTVLQIEGPGDKPITESFESFKQRFGVKKNDWIKIYRCEYPNAGQKAADWAKAHYKNSDKTYLVTLNLKSERFTYCTKIIYQAYKYGVSKDTINDHGLLIISPYALVDNFNNDYRLKLVKTY . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 190637 191218 . - 0 GCA_005502385.1_01437 GCA_005502385.1_01437_gene,GCA_005502385.1_01437_mRNA GCA_005502385.1_01437 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MKTIQLKRIIFVIFTSLLFFAFPSHTYASISSTSSSSGKGNDFKLQPGDIILTKGPVLFGFFGHSSIALDHDTVLQIEGPGDKPITESFESFKQRFGVKKNDWIKIYRCEYPNAGQKAADWAKAHYKNSDKTYLVTLNLKSERFTYCTKIIYQAYKYGVSKDTINDHGLLIISPYALVDNFNNDYRLKLVKTY persistent 193 lnsA lipoprotein N-acylation protein LnsA 2.3.1.- WP_019835713.1 UPI00037C566F UniRef100_UPI00037C566F,UniRef50_A0A1J3ZZ65,UniRef90_A0A657M1T1 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 191300 191488 . - . GCA_005502385.1_01438_gene GCA_005502385.1_01438 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSTHLTILLWLGIIFVVVASIILGLLLKSKKEERKESYLGFTVIFYIFGFALLIYVLIFGIL . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 191300 191488 . - . GCA_005502385.1_01438_mRNA GCA_005502385.1_01438 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSTHLTILLWLGIIFVVVASIILGLLLKSKKEERKESYLGFTVIFYIFGFALLIYVLIFGIL . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 191300 191488 . - 0 GCA_005502385.1_01438 GCA_005502385.1_01438_gene,GCA_005502385.1_01438_mRNA GCA_005502385.1_01438 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSTHLTILLWLGIIFVVVASIILGLLLKSKKEERKESYLGFTVIFYIFGFALLIYVLIFGIL persistent 62 tsaT type II toxin-antitoxin system toxin TsaT GO:0090729,GO:0110001 WP_019835712.1 UPI000361DE5F UniRef100_UPI000361DE5F,UniRef50_Q2G005,UniRef90_A0A533IU00 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 191511 191768 . - . GCA_005502385.1_01439_gene GCA_005502385.1_01439 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNINKLFWINIMITLLFLGFNITVTYFPKLDDYFWLIPGLIICGLTISFSLIAAILDKNLISEIIFLTNLIIFLYYIYPLIYNFF . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 191511 191768 . - . GCA_005502385.1_01439_mRNA GCA_005502385.1_01439 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNINKLFWINIMITLLFLGFNITVTYFPKLDDYFWLIPGLIICGLTISFSLIAAILDKNLISEIIFLTNLIIFLYYIYPLIYNFF . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 191511 191768 . - 0 GCA_005502385.1_01439 GCA_005502385.1_01439_gene,GCA_005502385.1_01439_mRNA GCA_005502385.1_01439 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNINKLFWINIMITLLFLGFNITVTYFPKLDDYFWLIPGLIICGLTISFSLIAAILDKNLISEIIFLTNLIIFLYYIYPLIYNFF shell 85 tsaA type II toxin-antitoxin system antitoxin TsaA GO:0110001 WP_017175886.1 UPI00036FD569 UniRef100_A0A4Q9WS45,UniRef50_A0A4Q9WS45,UniRef90_A0A4Q9WS45 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 192220 192423 . + . GCA_005502385.1_01440_gene GCA_005502385.1_01440 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTFYDFVIGFINDDTPLGSLANYIVNDHKFPKNERNNKEIRAYVMSNYVDHQLIESANRAISLYKLI . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 192220 192423 . + . GCA_005502385.1_01440_mRNA GCA_005502385.1_01440 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTFYDFVIGFINDDTPLGSLANYIVNDHKFPKNERNNKEIRAYVMSNYVDHQLIESANRAISLYKLI . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 192220 192423 . + 0 GCA_005502385.1_01440 GCA_005502385.1_01440_gene,GCA_005502385.1_01440_mRNA GCA_005502385.1_01440 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MTFYDFVIGFINDDTPLGSLANYIVNDHKFPKNERNNKEIRAYVMSNYVDHQLIESANRAISLYKLI persistent 67 yozE YozE SAM-like domain-containing protein WP_017175885.1 UPI0002FF6F3E UniRef100_A0A3S7GTI1,UniRef50_Q2G003,UniRef90_A0A533IZR9 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 192415 192657 . - . GCA_005502385.1_01441_gene GCA_005502385.1_01441 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNDHNQYNYVNPNNLSLDWECFVISKSEMLLDGVPSELIHSWLDREIIEPFSIRDNELNFKTKDIWNALKQQNWYYPNSN . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 192415 192657 . - . GCA_005502385.1_01441_mRNA GCA_005502385.1_01441 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNDHNQYNYVNPNNLSLDWECFVISKSEMLLDGVPSELIHSWLDREIIEPFSIRDNELNFKTKDIWNALKQQNWYYPNSN . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 192415 192657 . - 0 GCA_005502385.1_01441 GCA_005502385.1_01441_gene,GCA_005502385.1_01441_mRNA GCA_005502385.1_01441 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MNDHNQYNYVNPNNLSLDWECFVISKSEMLLDGVPSELIHSWLDREIIEPFSIRDNELNFKTKDIWNALKQQNWYYPNSN persistent 80 CobW/HypB/UreG nucleotide-binding domain-containing protein WP_017175884.1 UPI0002EF427A UniRef100_A0A4Q9WUJ7,UniRef50_A0A9X4L8V2,UniRef90_A0A533IZ89 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 192852 193451 . + . GCA_005502385.1_01442_gene GCA_005502385.1_01442 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSKILYLMRHGQTMFNLRGKVQGASDSPLTKLGISQAKQAGHYFKHNHITFDEAYSSSSERACDTLENVLPDQAYQRNKGLKEWSFGLFEGDSVQLLDAVWDKHDIFGTRLRAFGGETKSEVEHRIVTTLSNLLESSNGKTFLAVSHGTAIQVFLRKWIGDDMANQYIIGNCCILKFIYTHGKFEFLDMVDPTIDDVNK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 192852 193451 . + . GCA_005502385.1_01442_mRNA GCA_005502385.1_01442 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSKILYLMRHGQTMFNLRGKVQGASDSPLTKLGISQAKQAGHYFKHNHITFDEAYSSSSERACDTLENVLPDQAYQRNKGLKEWSFGLFEGDSVQLLDAVWDKHDIFGTRLRAFGGETKSEVEHRIVTTLSNLLESSNGKTFLAVSHGTAIQVFLRKWIGDDMANQYIIGNCCILKFIYTHGKFEFLDMVDPTIDDVNK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 192852 193451 . + 0 GCA_005502385.1_01442 GCA_005502385.1_01442_gene,GCA_005502385.1_01442_mRNA GCA_005502385.1_01442 phosphoglycerate mutase GpmB GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSKILYLMRHGQTMFNLRGKVQGASDSPLTKLGISQAKQAGHYFKHNHITFDEAYSSSSERACDTLENVLPDQAYQRNKGLKEWSFGLFEGDSVQLLDAVWDKHDIFGTRLRAFGGETKSEVEHRIVTTLSNLLESSNGKTFLAVSHGTAIQVFLRKWIGDDMANQYIIGNCCILKFIYTHGKFEFLDMVDPTIDDVNK persistent 199 Histidine phosphatase family protein WP_019835711.1 UPI00037EBE93 UniRef100_UPI00037EBE93,UniRef50_A0A0E8GAD0,UniRef90_A0A657M1C8 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 193721 194125 . + . GCA_005502385.1_01443_gene GCA_005502385.1_01443 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLCAHLFELSQRNKGLKEWSFGLFEGDSVQLLDAVWDKHDIFGTRLRPFGGETKNEVEHRIVTTLSNLLESSNGKTFLAVSHGTAIQVFLRKWIGDDMANQYVIGNCCILKFIYTHGKFEFLDMVDPTIDDANK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 193721 194125 . + . GCA_005502385.1_01443_mRNA GCA_005502385.1_01443 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLCAHLFELSQRNKGLKEWSFGLFEGDSVQLLDAVWDKHDIFGTRLRPFGGETKNEVEHRIVTTLSNLLESSNGKTFLAVSHGTAIQVFLRKWIGDDMANQYVIGNCCILKFIYTHGKFEFLDMVDPTIDDANK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 193721 194125 . + 0 GCA_005502385.1_01443 GCA_005502385.1_01443_gene,GCA_005502385.1_01443_mRNA GCA_005502385.1_01443 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MLCAHLFELSQRNKGLKEWSFGLFEGDSVQLLDAVWDKHDIFGTRLRPFGGETKNEVEHRIVTTLSNLLESSNGKTFLAVSHGTAIQVFLRKWIGDDMANQYVIGNCCILKFIYTHGKFEFLDMVDPTIDDANK persistent 134 histidine phosphatase family protein UniRef50_UPI002E16C7CE,UniRef90_UPI002E16C7CE . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 194139 194630 . - . GCA_005502385.1_01444_gene GCA_005502385.1_01444 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSEVRILTNNDLNQYITLISNDSHTYSWDKLYFQHVSPNHLKHILSKEEEYCNIFGNFKNEKLVAGVTLRQLKQVGTQHKAMLENLFLKDKKDEITLQNLICEVINYAKSRHIEKLMTCITSNHISAKIFFTALGFETLGIEKNSFKVDDTYFDVHWLLYDIK . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 194139 194630 . - . GCA_005502385.1_01444_mRNA GCA_005502385.1_01444 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSEVRILTNNDLNQYITLISNDSHTYSWDKLYFQHVSPNHLKHILSKEEEYCNIFGNFKNEKLVAGVTLRQLKQVGTQHKAMLENLFLKDKKDEITLQNLICEVINYAKSRHIEKLMTCITSNHISAKIFFTALGFETLGIEKNSFKVDDTYFDVHWLLYDIK . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 194139 194630 . - 0 GCA_005502385.1_01444 GCA_005502385.1_01444_gene,GCA_005502385.1_01444_mRNA GCA_005502385.1_01444 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MSEVRILTNNDLNQYITLISNDSHTYSWDKLYFQHVSPNHLKHILSKEEEYCNIFGNFKNEKLVAGVTLRQLKQVGTQHKAMLENLFLKDKKDEITLQNLICEVINYAKSRHIEKLMTCITSNHISAKIFFTALGFETLGIEKNSFKVDDTYFDVHWLLYDIK persistent 163 GNAT family N-acetyltransferase WP_019835710.1 UPI0003796B6E UniRef100_UPI0003796B6E,UniRef50_A0A380G366,UniRef90_A0A533J240 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 195075 195497 . - . GCA_005502385.1_01445_gene GCA_005502385.1_01445 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAVQYETKATNVGGRKGHVHTDDNAINVDVLPPQQADGNATNPEQLFAAGYASCFNGAYDLILKQNKVRGAEPEVTLTVRLEDDPNAESPKLSVSIDAKVKNVLSQEDAEKYLQDAHEFCPYSKATRGNIDVDLNVQVVD . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 195075 195497 . - . GCA_005502385.1_01445_mRNA GCA_005502385.1_01445 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAVQYETKATNVGGRKGHVHTDDNAINVDVLPPQQADGNATNPEQLFAAGYASCFNGAYDLILKQNKVRGAEPEVTLTVRLEDDPNAESPKLSVSIDAKVKNVLSQEDAEKYLQDAHEFCPYSKATRGNIDVDLNVQVVD . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 195075 195497 . - 0 GCA_005502385.1_01445 GCA_005502385.1_01445_gene,GCA_005502385.1_01445_mRNA GCA_005502385.1_01445 Organic hydroperoxide resistance protein-like protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAVQYETKATNVGGRKGHVHTDDNAINVDVLPPQQADGNATNPEQLFAAGYASCFNGAYDLILKQNKVRGAEPEVTLTVRLEDDPNAESPKLSVSIDAKVKNVLSQEDAEKYLQDAHEFCPYSKATRGNIDVDLNVQVVD persistent 140 osmC Organic hydroperoxide resistance protein-like 1.11.1.28 GO:0006979 COG1764,V WP_002448074.1 UPI00019FC518 UniRef100_A0A1L8Y547,UniRef50_Q49W40,UniRef90_Q5HQR8 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 195659 196384 . + . GCA_005502385.1_01446_gene GCA_005502385.1_01446 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAEVKVAATIAPQDIIDNETLNSINDNHAYIDIIELRIDQWESHHHEHLMKNLSLLNEIKGHFKILVTYRTLSQGGKGQLTNKEYLQLIETISSIDAFQMIDIEWESNIDVETHKRIIENAHRHQKQIIVSYHNFLETPPLEELKFTYYKMLKLNPEYVKIAVMPKEKRDVATLLEAVAYTSEAISQQVIGISMSRLGLVSRTAQGVFGGTVSYGCLGEPQAPGQIHVKELKKQLLFYENM . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 195659 196384 . + . GCA_005502385.1_01446_mRNA GCA_005502385.1_01446 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAEVKVAATIAPQDIIDNETLNSINDNHAYIDIIELRIDQWESHHHEHLMKNLSLLNEIKGHFKILVTYRTLSQGGKGQLTNKEYLQLIETISSIDAFQMIDIEWESNIDVETHKRIIENAHRHQKQIIVSYHNFLETPPLEELKFTYYKMLKLNPEYVKIAVMPKEKRDVATLLEAVAYTSEAISQQVIGISMSRLGLVSRTAQGVFGGTVSYGCLGEPQAPGQIHVKELKKQLLFYENM . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 195659 196384 . + 0 GCA_005502385.1_01446 GCA_005502385.1_01446_gene,GCA_005502385.1_01446_mRNA GCA_005502385.1_01446 3-dehydroquinate dehydratase GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MAEVKVAATIAPQDIIDNETLNSINDNHAYIDIIELRIDQWESHHHEHLMKNLSLLNEIKGHFKILVTYRTLSQGGKGQLTNKEYLQLIETISSIDAFQMIDIEWESNIDVETHKRIIENAHRHQKQIIVSYHNFLETPPLEELKFTYYKMLKLNPEYVKIAVMPKEKRDVATLLEAVAYTSEAISQQVIGISMSRLGLVSRTAQGVFGGTVSYGCLGEPQAPGQIHVKELKKQLLFYENM persistent 241 3-dehydroquinate dehydratase WP_048761457.1 UPI00065F9868 UniRef100_A0A8I0WBC2,UniRef50_Q49W41,UniRef90_A0A6N0I3L8 . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka gene 196454 196993 . + . GCA_005502385.1_01447_gene GCA_005502385.1_01447 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MELQEVISLRRSIKKFKHDMVINDEDVFKAIEQATDAPNHGMREPWRVIHVSKDRLGDMSRDITRFAFPNSPEKQEDHYNAVTNLGGMLVLVLKTDPRQRQNRENFFAMGAYTQNLMLLLYEKGIGTCWKTPLYIFEPKVRKAFGIAKDEAIAGLLYLTDLEEVPPKAKRKNKHLISEY . . . . . . . GCA_005502385.1|SCOV01000003.1 prokka mRNA 196454 196993 . + . GCA_005502385.1_01447_mRNA GCA_005502385.1_01447 GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MELQEVISLRRSIKKFKHDMVINDEDVFKAIEQATDAPNHGMREPWRVIHVSKDRLGDMSRDITRFAFPNSPEKQEDHYNAVTNLGGMLVLVLKTDPRQRQNRENFFAMGAYTQNLMLLLYEKGIGTCWKTPLYIFEPKVRKAFGIAKDEAIAGLLYLTDLEEVPPKAKRKNKHLISEY . . . . . . . GCA_005502385.1|SCOV01000003.1 Prodigal:002006 CDS 196454 196993 . + 0 GCA_005502385.1_01447 GCA_005502385.1_01447_gene,GCA_005502385.1_01447_mRNA GCA_005502385.1_01447 hypothetical protein GCA_005502385.1 SCOV01000003.1 GCA_005502385.1|SCOV01000003.1 GCA_005502385.1_SCOV01000003.1 MELQEVISLRRSIKKFKHDMVINDEDVFKAIEQATDAPNHGMREPWRVIHVSKDRLGDMSRDITRFAFPNSPEKQEDHYNAVTNLGGMLVLVLKTDPRQRQNRENFFAMGAYTQNLMLLLYEKGIGTCWKTPLYIFEPKVRKAFGIAKDEAIAGLLYLTDLEEVPPKAKRKNKHLISEY persistent 179 Nitroreductase WP_002448165.1 UPI00019FC51A UniRef100_A0A1L8Y537,UniRef50_Q2G001,UniRef90_A0A1L8Y537 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 178 1554 . - . GCA_005502385.1_01448_gene GCA_005502385.1_01448 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MAEDKLQRELSNRHIQLIAIGGAIGTGLFLGSGESVHLAGPSILLTYVIVGFVLFMFMRAMGEILLSNLGFKSFGDIAHHYIGPIAGFMVGWTYWLTWIISGMAEVTAVAKYVSYWYPTVPNWLTAAFTILVLVALNLFSAKLFGELEFWLSIIKVITIVALIIVGIVMIVLGMKTSYGQASVTNLWSRGGFFPNGIQGFLMAFQMAIFSFIGIELIGITAGETKNPHKTIPQAINNVPARILIFYIGSLAVIMSVVPWDKLNPADSPYVKLFGLIGIPFAAGIINFVVLTAAASSCNSGIFANSRTMYGLAGRKQGPPFLHKTNKHGVPHYAILVTCGLLSISVILNAVFKDATKVFVQITIFSTVLNILIWTLIMIAYLNYVKRNPELHKDSKFKMPGGKYMAFAILAFFAFIFIILLINSSTRIGVLFIPVWAIILWIMYQKYKKESDKAKVKME . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 178 1554 . - . GCA_005502385.1_01448_mRNA GCA_005502385.1_01448 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MAEDKLQRELSNRHIQLIAIGGAIGTGLFLGSGESVHLAGPSILLTYVIVGFVLFMFMRAMGEILLSNLGFKSFGDIAHHYIGPIAGFMVGWTYWLTWIISGMAEVTAVAKYVSYWYPTVPNWLTAAFTILVLVALNLFSAKLFGELEFWLSIIKVITIVALIIVGIVMIVLGMKTSYGQASVTNLWSRGGFFPNGIQGFLMAFQMAIFSFIGIELIGITAGETKNPHKTIPQAINNVPARILIFYIGSLAVIMSVVPWDKLNPADSPYVKLFGLIGIPFAAGIINFVVLTAAASSCNSGIFANSRTMYGLAGRKQGPPFLHKTNKHGVPHYAILVTCGLLSISVILNAVFKDATKVFVQITIFSTVLNILIWTLIMIAYLNYVKRNPELHKDSKFKMPGGKYMAFAILAFFAFIFIILLINSSTRIGVLFIPVWAIILWIMYQKYKKESDKAKVKME . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 178 1554 . - 0 GCA_005502385.1_01448 GCA_005502385.1_01448_gene,GCA_005502385.1_01448_mRNA GCA_005502385.1_01448 D-serine/D-alanine/glycine transporter GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MAEDKLQRELSNRHIQLIAIGGAIGTGLFLGSGESVHLAGPSILLTYVIVGFVLFMFMRAMGEILLSNLGFKSFGDIAHHYIGPIAGFMVGWTYWLTWIISGMAEVTAVAKYVSYWYPTVPNWLTAAFTILVLVALNLFSAKLFGELEFWLSIIKVITIVALIIVGIVMIVLGMKTSYGQASVTNLWSRGGFFPNGIQGFLMAFQMAIFSFIGIELIGITAGETKNPHKTIPQAINNVPARILIFYIGSLAVIMSVVPWDKLNPADSPYVKLFGLIGIPFAAGIINFVVLTAAASSCNSGIFANSRTMYGLAGRKQGPPFLHKTNKHGVPHYAILVTCGLLSISVILNAVFKDATKVFVQITIFSTVLNILIWTLIMIAYLNYVKRNPELHKDSKFKMPGGKYMAFAILAFFAFIFIILLINSSTRIGVLFIPVWAIILWIMYQKYKKESDKAKVKME persistent 458 Amino acid permease WP_048681582.1 UPI00065F8E30 UniRef100_UPI00065F8E30,UniRef50_Q2FXN2,UniRef90_A0A3S7GY91 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 1862 2482 . + . GCA_005502385.1_01449_gene GCA_005502385.1_01449 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNDFNEILESRKSVKGFDPNYKIPHDEMNEIISKATKAPSSVNMQPWRFVVVESDEAKAKLRPLIRFNTSQNDTSSAMIVIFGDLQCYEEGEFIYNKAVEEGHMPQEVKDQILPFVMDTYKNSSREVMSDIVKVDSSLAAMQLMLVAKQYGYDTNPIGGFEHDKIGEAFGYDLERYVPVLIVAIGKKEKEPHTSYRMPVDKVVDYQ . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 1862 2482 . + . GCA_005502385.1_01449_mRNA GCA_005502385.1_01449 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNDFNEILESRKSVKGFDPNYKIPHDEMNEIISKATKAPSSVNMQPWRFVVVESDEAKAKLRPLIRFNTSQNDTSSAMIVIFGDLQCYEEGEFIYNKAVEEGHMPQEVKDQILPFVMDTYKNSSREVMSDIVKVDSSLAAMQLMLVAKQYGYDTNPIGGFEHDKIGEAFGYDLERYVPVLIVAIGKKEKEPHTSYRMPVDKVVDYQ . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 1862 2482 . + 0 GCA_005502385.1_01449 GCA_005502385.1_01449_gene,GCA_005502385.1_01449_mRNA GCA_005502385.1_01449 Putative NAD(P)H nitroreductase YodC GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNDFNEILESRKSVKGFDPNYKIPHDEMNEIISKATKAPSSVNMQPWRFVVVESDEAKAKLRPLIRFNTSQNDTSSAMIVIFGDLQCYEEGEFIYNKAVEEGHMPQEVKDQILPFVMDTYKNSSREVMSDIVKVDSSLAAMQLMLVAKQYGYDTNPIGGFEHDKIGEAFGYDLERYVPVLIVAIGKKEKEPHTSYRMPVDKVVDYQ persistent 206 Nitroreductase family protein WP_017174732.1 UPI000304B511 UniRef100_UPI000304B511,UniRef50_A0A653LRS5,UniRef90_A0A657M264 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 2691 4700 . + . GCA_005502385.1_01450_gene GCA_005502385.1_01450 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDQSNKNKKQQQLDELRKNNDGTAMTTNSGMKVSEDEHSLTVGDRGPTLLEDFHFREKMMHFDHERIPERVVHARGFGAHGEFQVYEDLSEYTSADFLTHPEKTTPVFVRFSTVQGSKGSPDTVRDIRGFATKFYTDEGNFDLVGNNAPVFFIQDAIKFPDFVHALKPEPHNEMPQGGSAHDTFWDFIGQNPESMHAVFWAMSDRGIPKNFRQQEGFGVHTFRLVNKEGQSYFVKFHWKPKQGLESLVWDEAQILHGKDIDFHRKDLYESIDKGDYPEWELGLQIIKPEQEFDFDFDILDPTKLWPEDQVPVKIVGKMTLNRNVDNVFAETEQVAFHPAHIVPGIDFSNDPLLQGRLFSYTDTQISRLGGPNFNQIPINRPVAEVHNNQRDAMHQSYIHQGQTAYHKNGLNNNDPHTTPKEQGGFEHYHEKVEGYKVRQRSDSFKDYYTQAKLYKNSLTEAEQQHLADAFSFEIGKCKSTEVKQNAVNQINKVDRKLAEYVANNVGVEVPAENEEVQSDAKDSQLTLEKFDIPLKGHSVAVLVNGDISAETLKSYAEVFVNNDLNYAFVGQTAKNLNDDEIGITETYSTASSTVFDSVIVLSDGKEMLPTAIDFVEMSYNHKKPVVITEEAKNVLQSNRIDLDAPGVVVSSEPQAILDAFKRYRYFDRK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 2691 4700 . + . GCA_005502385.1_01450_mRNA GCA_005502385.1_01450 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDQSNKNKKQQQLDELRKNNDGTAMTTNSGMKVSEDEHSLTVGDRGPTLLEDFHFREKMMHFDHERIPERVVHARGFGAHGEFQVYEDLSEYTSADFLTHPEKTTPVFVRFSTVQGSKGSPDTVRDIRGFATKFYTDEGNFDLVGNNAPVFFIQDAIKFPDFVHALKPEPHNEMPQGGSAHDTFWDFIGQNPESMHAVFWAMSDRGIPKNFRQQEGFGVHTFRLVNKEGQSYFVKFHWKPKQGLESLVWDEAQILHGKDIDFHRKDLYESIDKGDYPEWELGLQIIKPEQEFDFDFDILDPTKLWPEDQVPVKIVGKMTLNRNVDNVFAETEQVAFHPAHIVPGIDFSNDPLLQGRLFSYTDTQISRLGGPNFNQIPINRPVAEVHNNQRDAMHQSYIHQGQTAYHKNGLNNNDPHTTPKEQGGFEHYHEKVEGYKVRQRSDSFKDYYTQAKLYKNSLTEAEQQHLADAFSFEIGKCKSTEVKQNAVNQINKVDRKLAEYVANNVGVEVPAENEEVQSDAKDSQLTLEKFDIPLKGHSVAVLVNGDISAETLKSYAEVFVNNDLNYAFVGQTAKNLNDDEIGITETYSTASSTVFDSVIVLSDGKEMLPTAIDFVEMSYNHKKPVVITEEAKNVLQSNRIDLDAPGVVVSSEPQAILDAFKRYRYFDRK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 2691 4700 . + 0 GCA_005502385.1_01450 GCA_005502385.1_01450_gene,GCA_005502385.1_01450_mRNA GCA_005502385.1_01450 Catalase HPII GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDQSNKNKKQQQLDELRKNNDGTAMTTNSGMKVSEDEHSLTVGDRGPTLLEDFHFREKMMHFDHERIPERVVHARGFGAHGEFQVYEDLSEYTSADFLTHPEKTTPVFVRFSTVQGSKGSPDTVRDIRGFATKFYTDEGNFDLVGNNAPVFFIQDAIKFPDFVHALKPEPHNEMPQGGSAHDTFWDFIGQNPESMHAVFWAMSDRGIPKNFRQQEGFGVHTFRLVNKEGQSYFVKFHWKPKQGLESLVWDEAQILHGKDIDFHRKDLYESIDKGDYPEWELGLQIIKPEQEFDFDFDILDPTKLWPEDQVPVKIVGKMTLNRNVDNVFAETEQVAFHPAHIVPGIDFSNDPLLQGRLFSYTDTQISRLGGPNFNQIPINRPVAEVHNNQRDAMHQSYIHQGQTAYHKNGLNNNDPHTTPKEQGGFEHYHEKVEGYKVRQRSDSFKDYYTQAKLYKNSLTEAEQQHLADAFSFEIGKCKSTEVKQNAVNQINKVDRKLAEYVANNVGVEVPAENEEVQSDAKDSQLTLEKFDIPLKGHSVAVLVNGDISAETLKSYAEVFVNNDLNYAFVGQTAKNLNDDEIGITETYSTASSTVFDSVIVLSDGKEMLPTAIDFVEMSYNHKKPVVITEEAKNVLQSNRIDLDAPGVVVSSEPQAILDAFKRYRYFDRK persistent 669 Catalase 1.11.1.6 UniRef50_A0A377FXT4,UniRef90_A0A3S7GUT1 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 4900 5430 . + . GCA_005502385.1_01451_gene GCA_005502385.1_01451 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNRGINHIGLTVPSIEKATAFFKQGLDGKIAYDSQTKKDEPRGGEYVEHILGLENGASIIHKRMMVFGCGPNIEMFEFQHAQQHEPQSLQDIGFTHISFYIESDAFDHVLERVKQAGGKPLSEPHSNTKYEDTENNKTVYIRAPWGSLIELQTVPNGFYYPDDSEAKVFIPKSNDE . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 4900 5430 . + . GCA_005502385.1_01451_mRNA GCA_005502385.1_01451 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNRGINHIGLTVPSIEKATAFFKQGLDGKIAYDSQTKKDEPRGGEYVEHILGLENGASIIHKRMMVFGCGPNIEMFEFQHAQQHEPQSLQDIGFTHISFYIESDAFDHVLERVKQAGGKPLSEPHSNTKYEDTENNKTVYIRAPWGSLIELQTVPNGFYYPDDSEAKVFIPKSNDE . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 4900 5430 . + 0 GCA_005502385.1_01451 GCA_005502385.1_01451_gene,GCA_005502385.1_01451_mRNA GCA_005502385.1_01451 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNRGINHIGLTVPSIEKATAFFKQGLDGKIAYDSQTKKDEPRGGEYVEHILGLENGASIIHKRMMVFGCGPNIEMFEFQHAQQHEPQSLQDIGFTHISFYIESDAFDHVLERVKQAGGKPLSEPHSNTKYEDTENNKTVYIRAPWGSLIELQTVPNGFYYPDDSEAKVFIPKSNDE persistent 176 VOC family protein UniRef50_B9DIF5,UniRef90_A0A4Q9WMV9 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 5557 5850 . + . GCA_005502385.1_01452_gene GCA_005502385.1_01452 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIDIQIQKCDLIEVIGSIINEKVEVDNQDACEYLATEIVNGLEDYNSEETQANNLLGLNSELRHEVKASNHSKKITLSANEEAFSSNDNNVDVRSSN . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 5557 5850 . + . GCA_005502385.1_01452_mRNA GCA_005502385.1_01452 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIDIQIQKCDLIEVIGSIINEKVEVDNQDACEYLATEIVNGLEDYNSEETQANNLLGLNSELRHEVKASNHSKKITLSANEEAFSSNDNNVDVRSSN . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 5557 5850 . + 0 GCA_005502385.1_01452 GCA_005502385.1_01452_gene,GCA_005502385.1_01452_mRNA GCA_005502385.1_01452 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIDIQIQKCDLIEVIGSIINEKVEVDNQDACEYLATEIVNGLEDYNSEETQANNLLGLNSELRHEVKASNHSKKITLSANEEAFSSNDNNVDVRSSN persistent 97 Phage gp6-like head-tail connector protein UniRef50_A0A974KXE8,UniRef90_A0A533J3P0 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 6067 8355 . - . GCA_005502385.1_01453_gene GCA_005502385.1_01453 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKSENRYSIRKFSVGASSILVATLLFMGGGAAQAAETHQEEGNPESAVAQSIGDHKKQSDNQETQQDNVQSDEQATSTSQSVTNENETQRLHNENKTSTQVKDDTDQLNTNEETIEHNLTDQTIKHQSNQSEDALTKETPSDESQSSSTKESKAFSEQSQNNTKDTIQKDTVTSDKKDNTTETSTTKNQSHSSENVTNVSPTEEKTTTHDHSTTQTTTAETNTSSTKDNTSKTTDSHSTKTSQSTPLTESKELTPSKTQQDSNVNQDAIKNNDVEAPSTEKANDTVDTTETKQTVTAKQPTDPAAPTVNPLNTKDEAISIDGTTNETIGNKDAKDQKNSQAGLETLANNGVATTNNTSQQQGTTETKDQTNKVAKQGQYKNQDPIILVHGFNGFTDDINPNVLSHYWGGDKLNIRQELEQNGYNAYEASISAFGSNYDRAVELYYYIKGGTVDYGAAHAERYGHERYGKTYEGVYRDWQPGQKVHLVGHSMGGQTIRQLEELLRNGSQEEIEYQKTHGGDISPLLQGGHDNMVSSITTLGTPHNGTHAADELGNEALVRQVVFDLGKRLGNKNSRVDFGLSQWGLKQQPGESYISYLLRVKNSKLWQSKDNGFYDLTRDGATDLNRKTSLNPNIVYKTYTAEATHPTLIGKQKADYNMFLPFTVTGNVIGKATEKEWRENDGLVSVISSQHPFNQAYTEATDTNQKGIWQVTPTKHDWDHVDFVGQDSTDTKRSREELQQFWYDLADDLVQTEALTSTNEA . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 6067 8355 . - . GCA_005502385.1_01453_mRNA GCA_005502385.1_01453 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKSENRYSIRKFSVGASSILVATLLFMGGGAAQAAETHQEEGNPESAVAQSIGDHKKQSDNQETQQDNVQSDEQATSTSQSVTNENETQRLHNENKTSTQVKDDTDQLNTNEETIEHNLTDQTIKHQSNQSEDALTKETPSDESQSSSTKESKAFSEQSQNNTKDTIQKDTVTSDKKDNTTETSTTKNQSHSSENVTNVSPTEEKTTTHDHSTTQTTTAETNTSSTKDNTSKTTDSHSTKTSQSTPLTESKELTPSKTQQDSNVNQDAIKNNDVEAPSTEKANDTVDTTETKQTVTAKQPTDPAAPTVNPLNTKDEAISIDGTTNETIGNKDAKDQKNSQAGLETLANNGVATTNNTSQQQGTTETKDQTNKVAKQGQYKNQDPIILVHGFNGFTDDINPNVLSHYWGGDKLNIRQELEQNGYNAYEASISAFGSNYDRAVELYYYIKGGTVDYGAAHAERYGHERYGKTYEGVYRDWQPGQKVHLVGHSMGGQTIRQLEELLRNGSQEEIEYQKTHGGDISPLLQGGHDNMVSSITTLGTPHNGTHAADELGNEALVRQVVFDLGKRLGNKNSRVDFGLSQWGLKQQPGESYISYLLRVKNSKLWQSKDNGFYDLTRDGATDLNRKTSLNPNIVYKTYTAEATHPTLIGKQKADYNMFLPFTVTGNVIGKATEKEWRENDGLVSVISSQHPFNQAYTEATDTNQKGIWQVTPTKHDWDHVDFVGQDSTDTKRSREELQQFWYDLADDLVQTEALTSTNEA . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 6067 8355 . - 0 GCA_005502385.1_01453 GCA_005502385.1_01453_gene,GCA_005502385.1_01453_mRNA GCA_005502385.1_01453 Lipase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKSENRYSIRKFSVGASSILVATLLFMGGGAAQAAETHQEEGNPESAVAQSIGDHKKQSDNQETQQDNVQSDEQATSTSQSVTNENETQRLHNENKTSTQVKDDTDQLNTNEETIEHNLTDQTIKHQSNQSEDALTKETPSDESQSSSTKESKAFSEQSQNNTKDTIQKDTVTSDKKDNTTETSTTKNQSHSSENVTNVSPTEEKTTTHDHSTTQTTTAETNTSSTKDNTSKTTDSHSTKTSQSTPLTESKELTPSKTQQDSNVNQDAIKNNDVEAPSTEKANDTVDTTETKQTVTAKQPTDPAAPTVNPLNTKDEAISIDGTTNETIGNKDAKDQKNSQAGLETLANNGVATTNNTSQQQGTTETKDQTNKVAKQGQYKNQDPIILVHGFNGFTDDINPNVLSHYWGGDKLNIRQELEQNGYNAYEASISAFGSNYDRAVELYYYIKGGTVDYGAAHAERYGHERYGKTYEGVYRDWQPGQKVHLVGHSMGGQTIRQLEELLRNGSQEEIEYQKTHGGDISPLLQGGHDNMVSSITTLGTPHNGTHAADELGNEALVRQVVFDLGKRLGNKNSRVDFGLSQWGLKQQPGESYISYLLRVKNSKLWQSKDNGFYDLTRDGATDLNRKTSLNPNIVYKTYTAEATHPTLIGKQKADYNMFLPFTVTGNVIGKATEKEWRENDGLVSVISSQHPFNQAYTEATDTNQKGIWQVTPTKHDWDHVDFVGQDSTDTKRSREELQQFWYDLADDLVQTEALTSTNEA persistent 762 lip YSIRK-targeted triacylglycerol lipase 3.1.1.3 GO:0005509,GO:0016298 UniRef50_P0C0R3,UniRef90_A0A3S7GV39 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 8749 10260 . - . GCA_005502385.1_01454_gene GCA_005502385.1_01454 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDFWSSKKGKMLEISILGILTIFGIGSQYFSNLAYSLNQGILQTSFGIGSQYLIIPSVIANFAFALGVPLGHTLTHKFGFRRNFLFFVTLFLIGSIIGLFSFDLIILSIAKGLQSLSTGVLFFTLLPKLFLNFPKQYRNVFLLMVIVGLFGANALGGLSGSLSLELDRWHWIFIINIISAILCLILGSIFLTKEEYQHSEPIHISRPMIISLVLSTIALTLPMGMLTQKGYGSLWVWPILIIAILFIVNFVVFNHEAKHPFVHFKTLLTKKPLVGATMAISSHLALLCGIAGINVYIIRILKLPFTISLHFYLFFFIGVIVTGLIKMFIYSAVGAGVLGTLGSSALLYVSVHWMILHDIVNIHLLYIQGFLLGFGASMTLVSGAMATLLDGDLLQAGQRSQTMHTIRNYAAAFLVPVIAYLIKYNIQKGTQSVYTENITNTSIYIKRIKDIAIDADHKVFLLMIIFNSIMLVSSIIQMSLGKGRRITPPRSPKNPELHLNTHK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 8749 10260 . - . GCA_005502385.1_01454_mRNA GCA_005502385.1_01454 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDFWSSKKGKMLEISILGILTIFGIGSQYFSNLAYSLNQGILQTSFGIGSQYLIIPSVIANFAFALGVPLGHTLTHKFGFRRNFLFFVTLFLIGSIIGLFSFDLIILSIAKGLQSLSTGVLFFTLLPKLFLNFPKQYRNVFLLMVIVGLFGANALGGLSGSLSLELDRWHWIFIINIISAILCLILGSIFLTKEEYQHSEPIHISRPMIISLVLSTIALTLPMGMLTQKGYGSLWVWPILIIAILFIVNFVVFNHEAKHPFVHFKTLLTKKPLVGATMAISSHLALLCGIAGINVYIIRILKLPFTISLHFYLFFFIGVIVTGLIKMFIYSAVGAGVLGTLGSSALLYVSVHWMILHDIVNIHLLYIQGFLLGFGASMTLVSGAMATLLDGDLLQAGQRSQTMHTIRNYAAAFLVPVIAYLIKYNIQKGTQSVYTENITNTSIYIKRIKDIAIDADHKVFLLMIIFNSIMLVSSIIQMSLGKGRRITPPRSPKNPELHLNTHK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 8749 10260 . - 0 GCA_005502385.1_01454 GCA_005502385.1_01454_gene,GCA_005502385.1_01454_mRNA GCA_005502385.1_01454 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDFWSSKKGKMLEISILGILTIFGIGSQYFSNLAYSLNQGILQTSFGIGSQYLIIPSVIANFAFALGVPLGHTLTHKFGFRRNFLFFVTLFLIGSIIGLFSFDLIILSIAKGLQSLSTGVLFFTLLPKLFLNFPKQYRNVFLLMVIVGLFGANALGGLSGSLSLELDRWHWIFIINIISAILCLILGSIFLTKEEYQHSEPIHISRPMIISLVLSTIALTLPMGMLTQKGYGSLWVWPILIIAILFIVNFVVFNHEAKHPFVHFKTLLTKKPLVGATMAISSHLALLCGIAGINVYIIRILKLPFTISLHFYLFFFIGVIVTGLIKMFIYSAVGAGVLGTLGSSALLYVSVHWMILHDIVNIHLLYIQGFLLGFGASMTLVSGAMATLLDGDLLQAGQRSQTMHTIRNYAAAFLVPVIAYLIKYNIQKGTQSVYTENITNTSIYIKRIKDIAIDADHKVFLLMIIFNSIMLVSSIIQMSLGKGRRITPPRSPKNPELHLNTHK persistent 503 norB Quinolone resistance protein NorB WP_048761068.1 UPI000660F607 UniRef100_UPI0008AD9997,UniRef50_A0A974KXI0,UniRef90_A0A974KXI0 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 10412 10503 . - . GCA_005502385.1_01455_gene GCA_005502385.1_01455 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 10412 10503 . - . GCA_005502385.1_01455_mRNA GCA_005502385.1_01455 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 . . . . . . . GCA_005502385.1|SCOV01000004.1 Aragorn:001002 tRNA 10412 10503 . - . GCA_005502385.1_01455 GCA_005502385.1_01455_gene,GCA_005502385.1_01455_mRNA GCA_005502385.1_01455 tRNA-Lys(ttt) GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 10722 11594 . + . GCA_005502385.1_01456_gene GCA_005502385.1_01456 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MLKSKFGKSLVASVVIGASVLGYSAQHQEAKAVETNYYYDGIQRGSYQAYLKAKKISNSSISIQRYPNASQNNLKAIGRVSNLNGWKKGSRDASVRKQDSMGTGTVIGAHTFVTNAHVIDDQYGRAAAPKYIKFQMNRDGSRMPYVFQATEVIKVPQYDIAVVHTKQNMSKYVKPVKIATDSEIKQLKFNSPLYSLGYPWQYNDNTKAYFNKLRVTQFSTNGTEIQTKDIFRSGASGSPMLNSTFTKMYGLRTYGYNLMGGSTDAYAKQEMSGGESFKGYAGRFVRQHIK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 10722 11594 . + . GCA_005502385.1_01456_mRNA GCA_005502385.1_01456 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MLKSKFGKSLVASVVIGASVLGYSAQHQEAKAVETNYYYDGIQRGSYQAYLKAKKISNSSISIQRYPNASQNNLKAIGRVSNLNGWKKGSRDASVRKQDSMGTGTVIGAHTFVTNAHVIDDQYGRAAAPKYIKFQMNRDGSRMPYVFQATEVIKVPQYDIAVVHTKQNMSKYVKPVKIATDSEIKQLKFNSPLYSLGYPWQYNDNTKAYFNKLRVTQFSTNGTEIQTKDIFRSGASGSPMLNSTFTKMYGLRTYGYNLMGGSTDAYAKQEMSGGESFKGYAGRFVRQHIK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 10722 11594 . + 0 GCA_005502385.1_01456 GCA_005502385.1_01456_gene,GCA_005502385.1_01456_mRNA GCA_005502385.1_01456 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MLKSKFGKSLVASVVIGASVLGYSAQHQEAKAVETNYYYDGIQRGSYQAYLKAKKISNSSISIQRYPNASQNNLKAIGRVSNLNGWKKGSRDASVRKQDSMGTGTVIGAHTFVTNAHVIDDQYGRAAAPKYIKFQMNRDGSRMPYVFQATEVIKVPQYDIAVVHTKQNMSKYVKPVKIATDSEIKQLKFNSPLYSLGYPWQYNDNTKAYFNKLRVTQFSTNGTEIQTKDIFRSGASGSPMLNSTFTKMYGLRTYGYNLMGGSTDAYAKQEMSGGESFKGYAGRFVRQHIK persistent 290 Serine protease WP_048761071.1 UPI0006601E5E UniRef100_UPI0006601E5E,UniRef50_A0A4V6KKK7,UniRef90_A0A3S7GVC7 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 11716 12621 . + . GCA_005502385.1_01457_gene GCA_005502385.1_01457 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKHYLAIGAITATTLLAGCDLGDMIGLNNSSEKSEHTTSQSNQSSNKNTSDNDNNNTQQDSNKSSNDNNQQENKTNSNVDNLSQAEKVALALNDPSVSDYAINANELRNHSYLEQGNVSKIHKNIDTYKLASMDYPINGSPSGMVFYSASPSRGAFVTVIGVSNDKVLVAGTQYDANYQQLRDNGKELDVSTLYDKYNNSDYEEIAKQIVFAGSQRSLNTDSDESSSTEKVTRANVIDKVEDYEGHQLDTETYTYKEPEQDENGDWGFSILDKNGDLVGSYIVTSDGIVTKYDEHGDPID . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 11716 12621 . + . GCA_005502385.1_01457_mRNA GCA_005502385.1_01457 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKHYLAIGAITATTLLAGCDLGDMIGLNNSSEKSEHTTSQSNQSSNKNTSDNDNNNTQQDSNKSSNDNNQQENKTNSNVDNLSQAEKVALALNDPSVSDYAINANELRNHSYLEQGNVSKIHKNIDTYKLASMDYPINGSPSGMVFYSASPSRGAFVTVIGVSNDKVLVAGTQYDANYQQLRDNGKELDVSTLYDKYNNSDYEEIAKQIVFAGSQRSLNTDSDESSSTEKVTRANVIDKVEDYEGHQLDTETYTYKEPEQDENGDWGFSILDKNGDLVGSYIVTSDGIVTKYDEHGDPID . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 11716 12621 . + 0 GCA_005502385.1_01457 GCA_005502385.1_01457_gene,GCA_005502385.1_01457_mRNA GCA_005502385.1_01457 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKHYLAIGAITATTLLAGCDLGDMIGLNNSSEKSEHTTSQSNQSSNKNTSDNDNNNTQQDSNKSSNDNNQQENKTNSNVDNLSQAEKVALALNDPSVSDYAINANELRNHSYLEQGNVSKIHKNIDTYKLASMDYPINGSPSGMVFYSASPSRGAFVTVIGVSNDKVLVAGTQYDANYQQLRDNGKELDVSTLYDKYNNSDYEEIAKQIVFAGSQRSLNTDSDESSSTEKVTRANVIDKVEDYEGHQLDTETYTYKEPEQDENGDWGFSILDKNGDLVGSYIVTSDGIVTKYDEHGDPID shell 301 Lipoprotein WP_017174738.1 UPI00031B6D7C UniRef100_A0A3S7GVJ6,UniRef50_A0A4Z1C3M9,UniRef90_A0A3S7GVJ6 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 12648 13523 . - . GCA_005502385.1_01458_gene GCA_005502385.1_01458 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDKATRILNILTLLLNGHVVTQEDLDRFTNVSKKSIQRDINTINTFFYESHFWRSNHTKIVYNYQLGGYELTHDTTNKQSLGVLSLLIKLQSLTPILHYDIYKFFLHAMSSVRIEDKHILMTMLHQFKVRDDLLPGKRLMDLQKAIVNKHRVRIEVDHNKMTIKPLSILYMHYDYWFTYEFQHKIHTVSLKSIQSLHVLDTKFSKDFANNAVLFETSTTIWNQFKQQFSIKEIVSRNEDTILAWVNCTRFDAYYIAYQLAPLAKIIAPESYIDSFIDRLDEIKRTYTENNS . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 12648 13523 . - . GCA_005502385.1_01458_mRNA GCA_005502385.1_01458 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDKATRILNILTLLLNGHVVTQEDLDRFTNVSKKSIQRDINTINTFFYESHFWRSNHTKIVYNYQLGGYELTHDTTNKQSLGVLSLLIKLQSLTPILHYDIYKFFLHAMSSVRIEDKHILMTMLHQFKVRDDLLPGKRLMDLQKAIVNKHRVRIEVDHNKMTIKPLSILYMHYDYWFTYEFQHKIHTVSLKSIQSLHVLDTKFSKDFANNAVLFETSTTIWNQFKQQFSIKEIVSRNEDTILAWVNCTRFDAYYIAYQLAPLAKIIAPESYIDSFIDRLDEIKRTYTENNS . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 12648 13523 . - 0 GCA_005502385.1_01458 GCA_005502385.1_01458_gene,GCA_005502385.1_01458_mRNA GCA_005502385.1_01458 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDKATRILNILTLLLNGHVVTQEDLDRFTNVSKKSIQRDINTINTFFYESHFWRSNHTKIVYNYQLGGYELTHDTTNKQSLGVLSLLIKLQSLTPILHYDIYKFFLHAMSSVRIEDKHILMTMLHQFKVRDDLLPGKRLMDLQKAIVNKHRVRIEVDHNKMTIKPLSILYMHYDYWFTYEFQHKIHTVSLKSIQSLHVLDTKFSKDFANNAVLFETSTTIWNQFKQQFSIKEIVSRNEDTILAWVNCTRFDAYYIAYQLAPLAKIIAPESYIDSFIDRLDEIKRTYTENNS persistent 291 HTH domain-containing protein WP_017174739.1 UPI0002F69A18 UniRef100_A0A3S7GVG6,UniRef50_Q4LA43,UniRef90_A0A3S7GVG6 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 13642 14496 . - . GCA_005502385.1_01459_gene GCA_005502385.1_01459 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MRIAIIGPGAVGTTIAYELQQILPHITLLGRTNKSIHFQTANQHVMVKDIKSMTDPFDVIIVAVKTHQLESLIPDLNRLTHDETTIILAQNGYGLRSTLPFKYVYQAVVYISGQKKDDEVIHFRDYRLHIQHDRRTEQLKHYLEHTKIELILEDHIETTIWYKLLVNLGINSITALGGNTAQILKIPEVYQLCTRLLEEGKQVAMAEGITLPDTIVEDIMHIYAGYPDHMGTSMYYDVMNHQPLEVESIQGFIYRKARTHHLSTPSLDTVYALLRSHHSLSIQY . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 13642 14496 . - . GCA_005502385.1_01459_mRNA GCA_005502385.1_01459 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MRIAIIGPGAVGTTIAYELQQILPHITLLGRTNKSIHFQTANQHVMVKDIKSMTDPFDVIIVAVKTHQLESLIPDLNRLTHDETTIILAQNGYGLRSTLPFKYVYQAVVYISGQKKDDEVIHFRDYRLHIQHDRRTEQLKHYLEHTKIELILEDHIETTIWYKLLVNLGINSITALGGNTAQILKIPEVYQLCTRLLEEGKQVAMAEGITLPDTIVEDIMHIYAGYPDHMGTSMYYDVMNHQPLEVESIQGFIYRKARTHHLSTPSLDTVYALLRSHHSLSIQY . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 13642 14496 . - 0 GCA_005502385.1_01459 GCA_005502385.1_01459_gene,GCA_005502385.1_01459_mRNA GCA_005502385.1_01459 2-dehydropantoate 2-reductase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MRIAIIGPGAVGTTIAYELQQILPHITLLGRTNKSIHFQTANQHVMVKDIKSMTDPFDVIIVAVKTHQLESLIPDLNRLTHDETTIILAQNGYGLRSTLPFKYVYQAVVYISGQKKDDEVIHFRDYRLHIQHDRRTEQLKHYLEHTKIELILEDHIETTIWYKLLVNLGINSITALGGNTAQILKIPEVYQLCTRLLEEGKQVAMAEGITLPDTIVEDIMHIYAGYPDHMGTSMYYDVMNHQPLEVESIQGFIYRKARTHHLSTPSLDTVYALLRSHHSLSIQY persistent 284 oxidoreductase WP_048682839.1 UPI0006611B71 UniRef100_UPI0006611B71,UniRef50_A0A0J9X283,UniRef90_A0A6N0I2H8 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 14579 15406 . + . GCA_005502385.1_01460_gene GCA_005502385.1_01460 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKNLSKLMEMKQNGTKISMVTAYDYPSAKQAQQANIDMILVGDSLGMTVLGYDTTTQVTLDDMIHHGKAVRRGADDTFIVVDLPIGAVGVSAEHDLNHAITLYQQTNANALKAEGAHLTDFIKKSTQMGIPIVAHLGLMPQSVGVMGYKLQGGTKDAAEQLIRDAHAVQEAGAVALVLEAIPSDLAGLISKQLDIPVIGIGAGKDTDGQVLVYHDMLNYGVERYAKFVKQFADLSVGIDGIKQYDKEVKAGAFPAEAHTYKKKILDEVNKNDTSN . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 14579 15406 . + . GCA_005502385.1_01460_mRNA GCA_005502385.1_01460 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKNLSKLMEMKQNGTKISMVTAYDYPSAKQAQQANIDMILVGDSLGMTVLGYDTTTQVTLDDMIHHGKAVRRGADDTFIVVDLPIGAVGVSAEHDLNHAITLYQQTNANALKAEGAHLTDFIKKSTQMGIPIVAHLGLMPQSVGVMGYKLQGGTKDAAEQLIRDAHAVQEAGAVALVLEAIPSDLAGLISKQLDIPVIGIGAGKDTDGQVLVYHDMLNYGVERYAKFVKQFADLSVGIDGIKQYDKEVKAGAFPAEAHTYKKKILDEVNKNDTSN . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 14579 15406 . + 0 GCA_005502385.1_01460 GCA_005502385.1_01460_gene,GCA_005502385.1_01460_mRNA GCA_005502385.1_01460 3-methyl-2-oxobutanoate hydroxymethyltransferase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKNLSKLMEMKQNGTKISMVTAYDYPSAKQAQQANIDMILVGDSLGMTVLGYDTTTQVTLDDMIHHGKAVRRGADDTFIVVDLPIGAVGVSAEHDLNHAITLYQQTNANALKAEGAHLTDFIKKSTQMGIPIVAHLGLMPQSVGVMGYKLQGGTKDAAEQLIRDAHAVQEAGAVALVLEAIPSDLAGLISKQLDIPVIGIGAGKDTDGQVLVYHDMLNYGVERYAKFVKQFADLSVGIDGIKQYDKEVKAGAFPAEAHTYKKKILDEVNKNDTSN persistent 275 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase 2.1.2.11 GO:0003864,GO:0015940 WP_049382200.1 UPI00066A9E72 UniRef100_UPI00066A9E72,UniRef50_Q2FV21,UniRef90_A0A6N0I2N1 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 15390 16241 . + . GCA_005502385.1_01461_gene GCA_005502385.1_01461 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTQVINTVKEMQAIAQHIKASGQSIGFIPTMGALHEGHLSMMRRSVEENDVTVISVFVNPLQFGPNEDYDAYPRQIDKDVSLVKAIHVDYVFHPSVEEMYPDELGITLKVGRLGEVLEGPQRPGHFDGVVTVVNKLFNIVSPNKAYFGKKDAQQLAIIEKMVKDFNHPIEIVGVDIVREDDGLARSSRNVYLTDEERKEAVHLSKSLKLAKDMYAEGERRSHILVGAIKTYLQEHTSGHIDEVAIYSYPELEVVNEINGQIFIALAVKFSKARLIDNIILGSK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 15390 16241 . + . GCA_005502385.1_01461_mRNA GCA_005502385.1_01461 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTQVINTVKEMQAIAQHIKASGQSIGFIPTMGALHEGHLSMMRRSVEENDVTVISVFVNPLQFGPNEDYDAYPRQIDKDVSLVKAIHVDYVFHPSVEEMYPDELGITLKVGRLGEVLEGPQRPGHFDGVVTVVNKLFNIVSPNKAYFGKKDAQQLAIIEKMVKDFNHPIEIVGVDIVREDDGLARSSRNVYLTDEERKEAVHLSKSLKLAKDMYAEGERRSHILVGAIKTYLQEHTSGHIDEVAIYSYPELEVVNEINGQIFIALAVKFSKARLIDNIILGSK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 15390 16241 . + 0 GCA_005502385.1_01461 GCA_005502385.1_01461_gene,GCA_005502385.1_01461_mRNA GCA_005502385.1_01461 Pantothenate synthetase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTQVINTVKEMQAIAQHIKASGQSIGFIPTMGALHEGHLSMMRRSVEENDVTVISVFVNPLQFGPNEDYDAYPRQIDKDVSLVKAIHVDYVFHPSVEEMYPDELGITLKVGRLGEVLEGPQRPGHFDGVVTVVNKLFNIVSPNKAYFGKKDAQQLAIIEKMVKDFNHPIEIVGVDIVREDDGLARSSRNVYLTDEERKEAVHLSKSLKLAKDMYAEGERRSHILVGAIKTYLQEHTSGHIDEVAIYSYPELEVVNEINGQIFIALAVKFSKARLIDNIILGSK persistent 283 panC pantoate--beta-alanine ligase 6.3.2.1 GO:0004592,GO:0015940 WP_061815562.1 UPI0007657E2E UniRef100_UPI0007657E2E,UniRef50_Q8CX59,UniRef90_A0A3S7GUU5 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 16247 16630 . + . GCA_005502385.1_01462_gene GCA_005502385.1_01462 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIRTMMNSKIHRARVTESNLNYVGSITIDADILDAVDIFPNEKVAIVNNNNGARFETYVIAGERGSGKICLNGAASRLVEVDDIVIIMTYVQLDDRELNDHAPKVAIMNENNEIIQMIHEKENTIIK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 16247 16630 . + . GCA_005502385.1_01462_mRNA GCA_005502385.1_01462 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIRTMMNSKIHRARVTESNLNYVGSITIDADILDAVDIFPNEKVAIVNNNNGARFETYVIAGERGSGKICLNGAASRLVEVDDIVIIMTYVQLDDRELNDHAPKVAIMNENNEIIQMIHEKENTIIK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 16247 16630 . + 0 GCA_005502385.1_01462 GCA_005502385.1_01462_gene,GCA_005502385.1_01462_mRNA GCA_005502385.1_01462 Aspartate 1-decarboxylase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIRTMMNSKIHRARVTESNLNYVGSITIDADILDAVDIFPNEKVAIVNNNNGARFETYVIAGERGSGKICLNGAASRLVEVDDIVIIMTYVQLDDRELNDHAPKVAIMNENNEIIQMIHEKENTIIK persistent 127 panD aspartate 1-decarboxylase 4.1.1.11 GO:0004068,GO:0006523 WP_049419886.1 UPI00066E232B UniRef100_UPI00066E232B,UniRef50_P52999,UniRef90_A0A2K4DMB3 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 16765 18216 . + . GCA_005502385.1_01463_gene GCA_005502385.1_01463 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTETLKDEWLKNPGKNIMAGIVVALALIPEAIAFSIIAGVDPMIGLYAAFIIATVTAIVGGRPAMISGATAAVALVVTPLVKDYGVQYLFAATILMGLIQLLLGILKVGRLLKFIPRSVMIGFVNALGIMIFLSQIEHIFGISIDTYIYVTITLLIVFILPKFFTIVPAPLIAIVVLTILYLTMGANIHTVGDLGTIKQALPHFTIPHVPFNLETLKIIFPYSLSMAIVGLVESLLTAKIVDDYTNTYSNKNKEARGQGIANIITALFGGMGGCAMIGQSGINVRSGANSRLSTLTAGLFLIFMIMVLGHIVIQIPMPVLAGIMVMVSIGTIDWGSFKYIKHAPKTDVFVMILTVVIVLFTHNLALGVVIGIVFSALFFATKISNIKVETRKENNQYFIVFKGPIFFVSIDTMMTQIDFNVQRETIQLDFSDAHIWDDSAVDAIETIVRKLEDKHNEVYVKNLNKDSRKVVSELSQLKENQLI . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 16765 18216 . + . GCA_005502385.1_01463_mRNA GCA_005502385.1_01463 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTETLKDEWLKNPGKNIMAGIVVALALIPEAIAFSIIAGVDPMIGLYAAFIIATVTAIVGGRPAMISGATAAVALVVTPLVKDYGVQYLFAATILMGLIQLLLGILKVGRLLKFIPRSVMIGFVNALGIMIFLSQIEHIFGISIDTYIYVTITLLIVFILPKFFTIVPAPLIAIVVLTILYLTMGANIHTVGDLGTIKQALPHFTIPHVPFNLETLKIIFPYSLSMAIVGLVESLLTAKIVDDYTNTYSNKNKEARGQGIANIITALFGGMGGCAMIGQSGINVRSGANSRLSTLTAGLFLIFMIMVLGHIVIQIPMPVLAGIMVMVSIGTIDWGSFKYIKHAPKTDVFVMILTVVIVLFTHNLALGVVIGIVFSALFFATKISNIKVETRKENNQYFIVFKGPIFFVSIDTMMTQIDFNVQRETIQLDFSDAHIWDDSAVDAIETIVRKLEDKHNEVYVKNLNKDSRKVVSELSQLKENQLI . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 16765 18216 . + 0 GCA_005502385.1_01463 GCA_005502385.1_01463_gene,GCA_005502385.1_01463_mRNA GCA_005502385.1_01463 C4-dicarboxylic acid transporter DauA GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTETLKDEWLKNPGKNIMAGIVVALALIPEAIAFSIIAGVDPMIGLYAAFIIATVTAIVGGRPAMISGATAAVALVVTPLVKDYGVQYLFAATILMGLIQLLLGILKVGRLLKFIPRSVMIGFVNALGIMIFLSQIEHIFGISIDTYIYVTITLLIVFILPKFFTIVPAPLIAIVVLTILYLTMGANIHTVGDLGTIKQALPHFTIPHVPFNLETLKIIFPYSLSMAIVGLVESLLTAKIVDDYTNTYSNKNKEARGQGIANIITALFGGMGGCAMIGQSGINVRSGANSRLSTLTAGLFLIFMIMVLGHIVIQIPMPVLAGIMVMVSIGTIDWGSFKYIKHAPKTDVFVMILTVVIVLFTHNLALGVVIGIVFSALFFATKISNIKVETRKENNQYFIVFKGPIFFVSIDTMMTQIDFNVQRETIQLDFSDAHIWDDSAVDAIETIVRKLEDKHNEVYVKNLNKDSRKVVSELSQLKENQLI shell 483 Sulfate permease WP_061815564.1 UPI00076561B4 UniRef100_UPI00076561B4,UniRef50_A0A1G8XLS7,UniRef90_A0AAE5MYR4 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 18264 18944 . - . GCA_005502385.1_01464_gene GCA_005502385.1_01464 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKFFAILMTSALLLSACSHSNDSNDKNENNTKQTSQTNKSDDNQQKHKKVIKDGRTYVDGILIVNKDIGLPSNYNPGEDPKAQQALQQLFSAAQKEGINLYKISGYRSYPTQVQLYHRYAARDGKKAADKYSARPGYSEHQTGLTFDIGGVNSDKNLYASFGKTKEGQWIAKNAHKYGFIVRYPKGKEKVTGYQYEPWHLRYLGKDTATKVYQSGKTLEEYVGLK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 18264 18944 . - . GCA_005502385.1_01464_mRNA GCA_005502385.1_01464 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKFFAILMTSALLLSACSHSNDSNDKNENNTKQTSQTNKSDDNQQKHKKVIKDGRTYVDGILIVNKDIGLPSNYNPGEDPKAQQALQQLFSAAQKEGINLYKISGYRSYPTQVQLYHRYAARDGKKAADKYSARPGYSEHQTGLTFDIGGVNSDKNLYASFGKTKEGQWIAKNAHKYGFIVRYPKGKEKVTGYQYEPWHLRYLGKDTATKVYQSGKTLEEYVGLK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 18264 18944 . - 0 GCA_005502385.1_01464 GCA_005502385.1_01464_gene,GCA_005502385.1_01464_mRNA GCA_005502385.1_01464 Putative carboxypeptidase YodJ GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKFFAILMTSALLLSACSHSNDSNDKNENNTKQTSQTNKSDDNQQKHKKVIKDGRTYVDGILIVNKDIGLPSNYNPGEDPKAQQALQQLFSAAQKEGINLYKISGYRSYPTQVQLYHRYAARDGKKAADKYSARPGYSEHQTGLTFDIGGVNSDKNLYASFGKTKEGQWIAKNAHKYGFIVRYPKGKEKVTGYQYEPWHLRYLGKDTATKVYQSGKTLEEYVGLK persistent 226 M15 family metallopeptidase WP_061815565.1 UPI0007656328 UniRef100_UPI0007656328,UniRef50_A0A0H2VFL7,UniRef90_A0A4Q9WNP7 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 19150 20025 . + . GCA_005502385.1_01465_gene GCA_005502385.1_01465 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKILFLGSIMMMLLAACSTHESSKEDNKSKSNQNNVQKAKKNESDKKDETSSTNTSKLSAKERLALAFCIDGVDQYTLTKNEILTGIYEYRLPTGKHNYKLVDFTLVKVKQPVKHAPKHMQFFTVYPDKSTYQALIGVNKDTVYVGRMQKGTLDYNDLLDKGKEASLEEVYKHNKDNKALPELISKMHISNSLPDNANDNGNPLASNDLEKSGSVNTRYRNEVYQLISDFDDVELKKSGYLWDDVKMTDHNGNWIVNYRNKKGEILGTYRMKHGKIQKLDENGKVVKEEK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 19150 20025 . + . GCA_005502385.1_01465_mRNA GCA_005502385.1_01465 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKILFLGSIMMMLLAACSTHESSKEDNKSKSNQNNVQKAKKNESDKKDETSSTNTSKLSAKERLALAFCIDGVDQYTLTKNEILTGIYEYRLPTGKHNYKLVDFTLVKVKQPVKHAPKHMQFFTVYPDKSTYQALIGVNKDTVYVGRMQKGTLDYNDLLDKGKEASLEEVYKHNKDNKALPELISKMHISNSLPDNANDNGNPLASNDLEKSGSVNTRYRNEVYQLISDFDDVELKKSGYLWDDVKMTDHNGNWIVNYRNKKGEILGTYRMKHGKIQKLDENGKVVKEEK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 19150 20025 . + 0 GCA_005502385.1_01465 GCA_005502385.1_01465_gene,GCA_005502385.1_01465_mRNA GCA_005502385.1_01465 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKILFLGSIMMMLLAACSTHESSKEDNKSKSNQNNVQKAKKNESDKKDETSSTNTSKLSAKERLALAFCIDGVDQYTLTKNEILTGIYEYRLPTGKHNYKLVDFTLVKVKQPVKHAPKHMQFFTVYPDKSTYQALIGVNKDTVYVGRMQKGTLDYNDLLDKGKEASLEEVYKHNKDNKALPELISKMHISNSLPDNANDNGNPLASNDLEKSGSVNTRYRNEVYQLISDFDDVELKKSGYLWDDVKMTDHNGNWIVNYRNKKGEILGTYRMKHGKIQKLDENGKVVKEEK persistent 291 Lipoprotein WP_137689597.1 UPI0010F96DC8 UniRef100_UPI0010F96DC8,UniRef50_A0A2T4L401,UniRef90_A0AAE5MYK5 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 20208 20846 . + . GCA_005502385.1_01466_gene GCA_005502385.1_01466 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MMTFLAITIFVLTLIFVIWQPKGLDISITAVIGAVVALLTGVVGWSDVMEVTSIVWNATLTFVAIILISLILDEIGFFEWAALHMVKASQGDGRKMFIFIMILGAIVAAFFANDGAALILTPIVLAMVRHLGFKEKMIFPFIIASGFIADTTSLPFTVSNLVNIVSADYFNIGFVEYLSRMILPNIFSLIASIIVLWLYFKKAMPKQVDIKK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 20208 20846 . + . GCA_005502385.1_01466_mRNA GCA_005502385.1_01466 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MMTFLAITIFVLTLIFVIWQPKGLDISITAVIGAVVALLTGVVGWSDVMEVTSIVWNATLTFVAIILISLILDEIGFFEWAALHMVKASQGDGRKMFIFIMILGAIVAAFFANDGAALILTPIVLAMVRHLGFKEKMIFPFIIASGFIADTTSLPFTVSNLVNIVSADYFNIGFVEYLSRMILPNIFSLIASIIVLWLYFKKAMPKQVDIKK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 20208 20846 . + 0 GCA_005502385.1_01466 GCA_005502385.1_01466_gene,GCA_005502385.1_01466_mRNA GCA_005502385.1_01466 Arsenical pump membrane protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MMTFLAITIFVLTLIFVIWQPKGLDISITAVIGAVVALLTGVVGWSDVMEVTSIVWNATLTFVAIILISLILDEIGFFEWAALHMVKASQGDGRKMFIFIMILGAIVAAFFANDGAALILTPIVLAMVRHLGFKEKMIFPFIIASGFIADTTSLPFTVSNLVNIVSADYFNIGFVEYLSRMILPNIFSLIASIIVLWLYFKKAMPKQVDIKK persistent 212 Arsenical pump membrane protein UniRef50_A0A975ZIU3 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 20843 21499 . + . GCA_005502385.1_01467_gene GCA_005502385.1_01467 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKAPQLVIKDASLFRISWFVLVLLLIGYMMSEFVRVPVSIIAGSIALIFLILAAKSNAVPVRKVVKGAPWNIVIFSLGMYLVVFGLKNVGITHVLGHIFSNIAHQGLFTSIMGVGFISAILSSIMNNLPTVLIDAIAIHQSAVTDVLKEGMIYANVIGSDLGPKITPIGSLATLLWLHVLAQKGIKISWGTYFKTGIVITLPVLFMTLLGLYLTLKLI . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 20843 21499 . + . GCA_005502385.1_01467_mRNA GCA_005502385.1_01467 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKAPQLVIKDASLFRISWFVLVLLLIGYMMSEFVRVPVSIIAGSIALIFLILAAKSNAVPVRKVVKGAPWNIVIFSLGMYLVVFGLKNVGITHVLGHIFSNIAHQGLFTSIMGVGFISAILSSIMNNLPTVLIDAIAIHQSAVTDVLKEGMIYANVIGSDLGPKITPIGSLATLLWLHVLAQKGIKISWGTYFKTGIVITLPVLFMTLLGLYLTLKLI . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 20843 21499 . + 0 GCA_005502385.1_01467 GCA_005502385.1_01467_gene,GCA_005502385.1_01467_mRNA GCA_005502385.1_01467 Arsenical pump membrane protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKAPQLVIKDASLFRISWFVLVLLLIGYMMSEFVRVPVSIIAGSIALIFLILAAKSNAVPVRKVVKGAPWNIVIFSLGMYLVVFGLKNVGITHVLGHIFSNIAHQGLFTSIMGVGFISAILSSIMNNLPTVLIDAIAIHQSAVTDVLKEGMIYANVIGSDLGPKITPIGSLATLLWLHVLAQKGIKISWGTYFKTGIVITLPVLFMTLLGLYLTLKLI persistent 218 Arsenical pump membrane protein UniRef50_A0A7Z1MY64 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 21677 23071 . + . GCA_005502385.1_01468_gene GCA_005502385.1_01468 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKNKTGKFKLEMPHTYAILMLIIVISWLLTYIIPAGEYAREKKNGQTIVIPGTYHTVSSEHLNFLNIFRAVPEGLISGGEIVFYVFLVGGAFGIVHKTGAFENGVNKAMRVLGKANFLMIPLTMIIFSILGFTIGLAEETIIFVPIGIIIARTLGYDALTGAAMVILGAASGFSGGMLNPFTVGVAQTVAELPMFSGWGLRTIIYLFILATAISTVMLYASKVKKDKTKSIVYHLEKEEGQVNQDIDYQHFSKKQAFSLMIIMATILFNIFGIFKFGWSFNEMSANFLFAGILAGLVGGLGFNGTFDALVDGMKNILFGAMIVGIAKGIIVLLENGKIIDTIVHALTTLLSDVPTSLVIIAMFILQFILNFFIPSGSGQALTTMPLMVPISDLLHINRQLTVLAFQYGDAISNILFPTSAILMGALAVGKISYTEWLKFVWKPILIWIIICSVAMSIALVIGY . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 21677 23071 . + . GCA_005502385.1_01468_mRNA GCA_005502385.1_01468 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKNKTGKFKLEMPHTYAILMLIIVISWLLTYIIPAGEYAREKKNGQTIVIPGTYHTVSSEHLNFLNIFRAVPEGLISGGEIVFYVFLVGGAFGIVHKTGAFENGVNKAMRVLGKANFLMIPLTMIIFSILGFTIGLAEETIIFVPIGIIIARTLGYDALTGAAMVILGAASGFSGGMLNPFTVGVAQTVAELPMFSGWGLRTIIYLFILATAISTVMLYASKVKKDKTKSIVYHLEKEEGQVNQDIDYQHFSKKQAFSLMIIMATILFNIFGIFKFGWSFNEMSANFLFAGILAGLVGGLGFNGTFDALVDGMKNILFGAMIVGIAKGIIVLLENGKIIDTIVHALTTLLSDVPTSLVIIAMFILQFILNFFIPSGSGQALTTMPLMVPISDLLHINRQLTVLAFQYGDAISNILFPTSAILMGALAVGKISYTEWLKFVWKPILIWIIICSVAMSIALVIGY . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 21677 23071 . + 0 GCA_005502385.1_01468 GCA_005502385.1_01468_gene,GCA_005502385.1_01468_mRNA GCA_005502385.1_01468 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKNKTGKFKLEMPHTYAILMLIIVISWLLTYIIPAGEYAREKKNGQTIVIPGTYHTVSSEHLNFLNIFRAVPEGLISGGEIVFYVFLVGGAFGIVHKTGAFENGVNKAMRVLGKANFLMIPLTMIIFSILGFTIGLAEETIIFVPIGIIIARTLGYDALTGAAMVILGAASGFSGGMLNPFTVGVAQTVAELPMFSGWGLRTIIYLFILATAISTVMLYASKVKKDKTKSIVYHLEKEEGQVNQDIDYQHFSKKQAFSLMIIMATILFNIFGIFKFGWSFNEMSANFLFAGILAGLVGGLGFNGTFDALVDGMKNILFGAMIVGIAKGIIVLLENGKIIDTIVHALTTLLSDVPTSLVIIAMFILQFILNFFIPSGSGQALTTMPLMVPISDLLHINRQLTVLAFQYGDAISNILFPTSAILMGALAVGKISYTEWLKFVWKPILIWIIICSVAMSIALVIGY persistent 464 abgT AbgT family transporter WP_017174747.1 UPI0002F3059D UniRef100_A0A3S7GVD4,UniRef50_Q4A0C6,UniRef90_A0A3S7GVD4 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 23191 24375 . - . GCA_005502385.1_01469_gene GCA_005502385.1_01469 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSQRLWSKDFIFVTIVNLFMYLIHYMLIVTITQFTIETYHASESIGGLAAGVFIIGMLAGRLGAGRIIDHLQPKNVLIGGVIGSIIAIALYFTIHSILILMFVRFIHGIAFGFSSTATGTISSRLIPEERKGEGIGYYGLSVTLASAFGPFLGLVLNNNLGFSSIFGISLISIVVSFSFTLLIKKLPMNHDIVTEEQSRPKGLSAFLQKEALPISCVVILVGIAYASVLSFLSIYSEMLHLVTASSFFFIVFAVVTFVTRPFTGKIYDHFGENKVMYPVLLSFAIGLAILSIVSSPFLLLLSAAFIGFGYGTIVPTAQAIAIQQSPTSKMGLATSTFYIFVDFGAGMGPFILGLLIPFMGYRYLYLAMAGLIIIAMILYFFVHGRYQNSTSSKG . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 23191 24375 . - . GCA_005502385.1_01469_mRNA GCA_005502385.1_01469 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSQRLWSKDFIFVTIVNLFMYLIHYMLIVTITQFTIETYHASESIGGLAAGVFIIGMLAGRLGAGRIIDHLQPKNVLIGGVIGSIIAIALYFTIHSILILMFVRFIHGIAFGFSSTATGTISSRLIPEERKGEGIGYYGLSVTLASAFGPFLGLVLNNNLGFSSIFGISLISIVVSFSFTLLIKKLPMNHDIVTEEQSRPKGLSAFLQKEALPISCVVILVGIAYASVLSFLSIYSEMLHLVTASSFFFIVFAVVTFVTRPFTGKIYDHFGENKVMYPVLLSFAIGLAILSIVSSPFLLLLSAAFIGFGYGTIVPTAQAIAIQQSPTSKMGLATSTFYIFVDFGAGMGPFILGLLIPFMGYRYLYLAMAGLIIIAMILYFFVHGRYQNSTSSKG . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 23191 24375 . - 0 GCA_005502385.1_01469 GCA_005502385.1_01469_gene,GCA_005502385.1_01469_mRNA GCA_005502385.1_01469 putative MFS-type transporter YhhS GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSQRLWSKDFIFVTIVNLFMYLIHYMLIVTITQFTIETYHASESIGGLAAGVFIIGMLAGRLGAGRIIDHLQPKNVLIGGVIGSIIAIALYFTIHSILILMFVRFIHGIAFGFSSTATGTISSRLIPEERKGEGIGYYGLSVTLASAFGPFLGLVLNNNLGFSSIFGISLISIVVSFSFTLLIKKLPMNHDIVTEEQSRPKGLSAFLQKEALPISCVVILVGIAYASVLSFLSIYSEMLHLVTASSFFFIVFAVVTFVTRPFTGKIYDHFGENKVMYPVLLSFAIGLAILSIVSSPFLLLLSAAFIGFGYGTIVPTAQAIAIQQSPTSKMGLATSTFYIFVDFGAGMGPFILGLLIPFMGYRYLYLAMAGLIIIAMILYFFVHGRYQNSTSSKG shell 394 MFS transporter WP_017174748.1 UPI0002DA3D8C UniRef100_A0A4Q9WR29,UniRef50_A0A380G3R3,UniRef90_A0A4Q9WR29 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 24506 25396 . + . GCA_005502385.1_01470_gene GCA_005502385.1_01470 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNFEQLIYVKSVYEQESMIRASELMHISQSAMSQSIANLETELGYSLFYRSRKGTVPTEIGKRLIPKILEILEAKEHLMLEVERLQTHITGKLTIATIPTLFHKLLPKVISQFKVDYPNVDIEVIESDRENIIKMLRNNEIDLGLIGKKESDKTMSLIHEFPLNLSTNFKLIVPAKSKLTFKDTVNLEDIKDYPFILYDRSFYHHHLKKFEEENGELKIVFRTHNPIVLLRTVAEGLGVGMISSYMIEDEPILNDEYIEAIPLGHPFDYSVYFTAIVNDNRKNETSLLRFIDYLKK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 24506 25396 . + . GCA_005502385.1_01470_mRNA GCA_005502385.1_01470 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNFEQLIYVKSVYEQESMIRASELMHISQSAMSQSIANLETELGYSLFYRSRKGTVPTEIGKRLIPKILEILEAKEHLMLEVERLQTHITGKLTIATIPTLFHKLLPKVISQFKVDYPNVDIEVIESDRENIIKMLRNNEIDLGLIGKKESDKTMSLIHEFPLNLSTNFKLIVPAKSKLTFKDTVNLEDIKDYPFILYDRSFYHHHLKKFEEENGELKIVFRTHNPIVLLRTVAEGLGVGMISSYMIEDEPILNDEYIEAIPLGHPFDYSVYFTAIVNDNRKNETSLLRFIDYLKK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 24506 25396 . + 0 GCA_005502385.1_01470 GCA_005502385.1_01470_gene,GCA_005502385.1_01470_mRNA GCA_005502385.1_01470 HTH-type transcriptional regulator SsuR GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNFEQLIYVKSVYEQESMIRASELMHISQSAMSQSIANLETELGYSLFYRSRKGTVPTEIGKRLIPKILEILEAKEHLMLEVERLQTHITGKLTIATIPTLFHKLLPKVISQFKVDYPNVDIEVIESDRENIIKMLRNNEIDLGLIGKKESDKTMSLIHEFPLNLSTNFKLIVPAKSKLTFKDTVNLEDIKDYPFILYDRSFYHHHLKKFEEENGELKIVFRTHNPIVLLRTVAEGLGVGMISSYMIEDEPILNDEYIEAIPLGHPFDYSVYFTAIVNDNRKNETSLLRFIDYLKK shell 296 Transcriptional regulator WP_017174749.1 UPI0002F0857A UniRef100_A0A3S7GVH6,UniRef50_A0A380HP18,UniRef90_A0A3S7GVH6 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 25503 26282 . + . GCA_005502385.1_01471_gene GCA_005502385.1_01471 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDNSKKVALVTGAAQGIGFKIAERLFNDGFNVAIVDFNEEGAKKAAEALSKEGQEAVAFRADVSDRENVFDVTRKVVEHFGELNVVVNNAGLGPTTPIHTVTPEQFNQVIGVNVGGVFWGIQAALEQFEKLGHGGKIINATSQAGVEGNAGLSLYSSTKFAVRGLTQVAARDLADKGITVNAFAPGIVETPMMEGIAKKLAEENNQPEEWGWKQFTDQITLKRLSKPEDVANVVGFLASSDSDYITGQTIIVDGGMRFH . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 25503 26282 . + . GCA_005502385.1_01471_mRNA GCA_005502385.1_01471 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDNSKKVALVTGAAQGIGFKIAERLFNDGFNVAIVDFNEEGAKKAAEALSKEGQEAVAFRADVSDRENVFDVTRKVVEHFGELNVVVNNAGLGPTTPIHTVTPEQFNQVIGVNVGGVFWGIQAALEQFEKLGHGGKIINATSQAGVEGNAGLSLYSSTKFAVRGLTQVAARDLADKGITVNAFAPGIVETPMMEGIAKKLAEENNQPEEWGWKQFTDQITLKRLSKPEDVANVVGFLASSDSDYITGQTIIVDGGMRFH . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 25503 26282 . + 0 GCA_005502385.1_01471 GCA_005502385.1_01471_gene,GCA_005502385.1_01471_mRNA GCA_005502385.1_01471 Diacetyl reductase [(S)-acetoin forming] GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDNSKKVALVTGAAQGIGFKIAERLFNDGFNVAIVDFNEEGAKKAAEALSKEGQEAVAFRADVSDRENVFDVTRKVVEHFGELNVVVNNAGLGPTTPIHTVTPEQFNQVIGVNVGGVFWGIQAALEQFEKLGHGGKIINATSQAGVEGNAGLSLYSSTKFAVRGLTQVAARDLADKGITVNAFAPGIVETPMMEGIAKKLAEENNQPEEWGWKQFTDQITLKRLSKPEDVANVVGFLASSDSDYITGQTIIVDGGMRFH persistent 259 (S)-acetoin forming diacetyl reductase 1.1.1.304 GO:0019152,GO:0045150 WP_017174750.1 UPI0002E9E38E UniRef100_A0A3S7GYB2,UniRef50_Q5HJP2,UniRef90_A0A3S7GYB2 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 26683 26922 . + . GCA_005502385.1_01472_gene GCA_005502385.1_01472 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MRLNNMNIVSGILCILSFLLAVSITFTDMFWYLPGFFVMLLSVVSSVVGLMSGSKVFNSITLFLTIIFFLIFSSPLLLA . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 26683 26922 . + . GCA_005502385.1_01472_mRNA GCA_005502385.1_01472 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MRLNNMNIVSGILCILSFLLAVSITFTDMFWYLPGFFVMLLSVVSSVVGLMSGSKVFNSITLFLTIIFFLIFSSPLLLA . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 26683 26922 . + 0 GCA_005502385.1_01472 GCA_005502385.1_01472_gene,GCA_005502385.1_01472_mRNA GCA_005502385.1_01472 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MRLNNMNIVSGILCILSFLLAVSITFTDMFWYLPGFFVMLLSVVSSVVGLMSGSKVFNSITLFLTIIFFLIFSSPLLLA persistent 79 hypothetical protein WP_002449430.1 UPI00019FC8BB UniRef100_UPI00019FC8BB,UniRef50_A0A6N0I2K8,UniRef90_A0AAE5MYY1 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 27070 28413 . + . GCA_005502385.1_01473_gene GCA_005502385.1_01473 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKVNKYLIFILGALGGLLYGYDNGIISGALLYIPKDIPLHNGAIEGLVVSSMLFGAIVGAGGSGPLSDRIGRRRLVLFIALVFIVGSLVLAFSTNIVMLIIGRAIVGLAVGGSMSTVPVYLTEMAPTELRGSLGSLNQLMITIGILAAYLVNYAFADMGAWRWMLGLAVVPSLILLIGVAFMPESPRWLLENRSEKAARDVMKITYNPDAIDAEIKEMKEIASQSESTFSVIKSPWLRPTLIIGCIFAIFQQFIGINAVIFYAPTIFTKAGLGGSASIIGTVGIGVVNVLVTILALFIVDRVDRKKLLVIGNIGMIASLVIMAMLIWSIGIQSSAWVIIICLSLFIVFFGISWGPVLWVMLPELFPTRARGAATGIAALVLNFGTLIVAQLFPILNHNLDTEWVFLIFAAIGVLAMFFVIKYLPETRGRSLAEIEHELRLRTGVKSE . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 27070 28413 . + . GCA_005502385.1_01473_mRNA GCA_005502385.1_01473 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKVNKYLIFILGALGGLLYGYDNGIISGALLYIPKDIPLHNGAIEGLVVSSMLFGAIVGAGGSGPLSDRIGRRRLVLFIALVFIVGSLVLAFSTNIVMLIIGRAIVGLAVGGSMSTVPVYLTEMAPTELRGSLGSLNQLMITIGILAAYLVNYAFADMGAWRWMLGLAVVPSLILLIGVAFMPESPRWLLENRSEKAARDVMKITYNPDAIDAEIKEMKEIASQSESTFSVIKSPWLRPTLIIGCIFAIFQQFIGINAVIFYAPTIFTKAGLGGSASIIGTVGIGVVNVLVTILALFIVDRVDRKKLLVIGNIGMIASLVIMAMLIWSIGIQSSAWVIIICLSLFIVFFGISWGPVLWVMLPELFPTRARGAATGIAALVLNFGTLIVAQLFPILNHNLDTEWVFLIFAAIGVLAMFFVIKYLPETRGRSLAEIEHELRLRTGVKSE . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 27070 28413 . + 0 GCA_005502385.1_01473 GCA_005502385.1_01473_gene,GCA_005502385.1_01473_mRNA GCA_005502385.1_01473 putative metabolite transport protein CsbC GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKVNKYLIFILGALGGLLYGYDNGIISGALLYIPKDIPLHNGAIEGLVVSSMLFGAIVGAGGSGPLSDRIGRRRLVLFIALVFIVGSLVLAFSTNIVMLIIGRAIVGLAVGGSMSTVPVYLTEMAPTELRGSLGSLNQLMITIGILAAYLVNYAFADMGAWRWMLGLAVVPSLILLIGVAFMPESPRWLLENRSEKAARDVMKITYNPDAIDAEIKEMKEIASQSESTFSVIKSPWLRPTLIIGCIFAIFQQFIGINAVIFYAPTIFTKAGLGGSASIIGTVGIGVVNVLVTILALFIVDRVDRKKLLVIGNIGMIASLVIMAMLIWSIGIQSSAWVIIICLSLFIVFFGISWGPVLWVMLPELFPTRARGAATGIAALVLNFGTLIVAQLFPILNHNLDTEWVFLIFAAIGVLAMFFVIKYLPETRGRSLAEIEHELRLRTGVKSE persistent 447 Sugar porter family MFS transporter WP_017174752.1 UPI0002FC0CE3 UniRef100_A0A8X8GJW3,UniRef50_I2CC31,UniRef90_A0A8X8GJW3 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 28514 30217 . + . GCA_005502385.1_01474_gene GCA_005502385.1_01474 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKQSKDLERLLKSLDGQKYGAYKRMKGIYQFDQFRLAIDHVQVDPFAPPSKMRVIIGKHETEIPNELLDTKDKRIVTSDFLTRAVETQLKHFNRTVKGSGKNGKIFIDHPGQEILERTSVVINDKEIEIRIEVGLPAAGRKILGKAAAYTIIHGIPQMVEKAIRYKNLNQQALKEQVVLKLDQTYIRQQLETEHLVAFVANGSILPRKSGVSDAPMKGAIQFTSPKKFEHTFNLPSGRSVTGMAIPQGITLIVGGGYHGKSTLLEALERSVYDHIQHDGREFVVTQHDAMKIRAEDGRNVENVDISPFIDNLPGKKDTTHFSTENASGSTSQATNVIEALEAESSLLLVDEDTSATNFMIRDGRMQQLIAPEKEPITPFSNKVKSLYEDYSVSTILIVGGSGDYFDVADQVLMMDEYHLKDVTEEAKEITNTDGYKREIDGDQSFGVLSHRIPLTDSFSIKGKEKRFKAKGLHSIMYGHEPINLTGLEQLVDDSQTNAITVMLDYFRRHGINNQNSIIQATNEMYRLIEHEGLEALSHFNGHPGNLALPRKQEFIGTLNRYRGLKVK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 28514 30217 . + . GCA_005502385.1_01474_mRNA GCA_005502385.1_01474 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKQSKDLERLLKSLDGQKYGAYKRMKGIYQFDQFRLAIDHVQVDPFAPPSKMRVIIGKHETEIPNELLDTKDKRIVTSDFLTRAVETQLKHFNRTVKGSGKNGKIFIDHPGQEILERTSVVINDKEIEIRIEVGLPAAGRKILGKAAAYTIIHGIPQMVEKAIRYKNLNQQALKEQVVLKLDQTYIRQQLETEHLVAFVANGSILPRKSGVSDAPMKGAIQFTSPKKFEHTFNLPSGRSVTGMAIPQGITLIVGGGYHGKSTLLEALERSVYDHIQHDGREFVVTQHDAMKIRAEDGRNVENVDISPFIDNLPGKKDTTHFSTENASGSTSQATNVIEALEAESSLLLVDEDTSATNFMIRDGRMQQLIAPEKEPITPFSNKVKSLYEDYSVSTILIVGGSGDYFDVADQVLMMDEYHLKDVTEEAKEITNTDGYKREIDGDQSFGVLSHRIPLTDSFSIKGKEKRFKAKGLHSIMYGHEPINLTGLEQLVDDSQTNAITVMLDYFRRHGINNQNSIIQATNEMYRLIEHEGLEALSHFNGHPGNLALPRKQEFIGTLNRYRGLKVK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 28514 30217 . + 0 GCA_005502385.1_01474 GCA_005502385.1_01474_gene,GCA_005502385.1_01474_mRNA GCA_005502385.1_01474 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKQSKDLERLLKSLDGQKYGAYKRMKGIYQFDQFRLAIDHVQVDPFAPPSKMRVIIGKHETEIPNELLDTKDKRIVTSDFLTRAVETQLKHFNRTVKGSGKNGKIFIDHPGQEILERTSVVINDKEIEIRIEVGLPAAGRKILGKAAAYTIIHGIPQMVEKAIRYKNLNQQALKEQVVLKLDQTYIRQQLETEHLVAFVANGSILPRKSGVSDAPMKGAIQFTSPKKFEHTFNLPSGRSVTGMAIPQGITLIVGGGYHGKSTLLEALERSVYDHIQHDGREFVVTQHDAMKIRAEDGRNVENVDISPFIDNLPGKKDTTHFSTENASGSTSQATNVIEALEAESSLLLVDEDTSATNFMIRDGRMQQLIAPEKEPITPFSNKVKSLYEDYSVSTILIVGGSGDYFDVADQVLMMDEYHLKDVTEEAKEITNTDGYKREIDGDQSFGVLSHRIPLTDSFSIKGKEKRFKAKGLHSIMYGHEPINLTGLEQLVDDSQTNAITVMLDYFRRHGINNQNSIIQATNEMYRLIEHEGLEALSHFNGHPGNLALPRKQEFIGTLNRYRGLKVK persistent 567 ATPase UniRef50_U2V923,UniRef90_A0A3S7GV42 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 30586 31026 . + . GCA_005502385.1_01475_gene GCA_005502385.1_01475 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKDEMTLANQLCFSAYNVSRLFAQFYEQQLRPFGLTYSQYLVLLALWEEDNRTLHEIGRQLDLSSNTLTPLLKRLEQSGWVIRERSETDKRQLMVTLTEKAHQQQEAVFEAVAECLPSNFDKTNYNQAKDVLEQLEHGLKQLNKK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 30586 31026 . + . GCA_005502385.1_01475_mRNA GCA_005502385.1_01475 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKDEMTLANQLCFSAYNVSRLFAQFYEQQLRPFGLTYSQYLVLLALWEEDNRTLHEIGRQLDLSSNTLTPLLKRLEQSGWVIRERSETDKRQLMVTLTEKAHQQQEAVFEAVAECLPSNFDKTNYNQAKDVLEQLEHGLKQLNKK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 30586 31026 . + 0 GCA_005502385.1_01475 GCA_005502385.1_01475_gene,GCA_005502385.1_01475_mRNA GCA_005502385.1_01475 Organic hydroperoxide resistance transcriptional regulator GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKDEMTLANQLCFSAYNVSRLFAQFYEQQLRPFGLTYSQYLVLLALWEEDNRTLHEIGRQLDLSSNTLTPLLKRLEQSGWVIRERSETDKRQLMVTLTEKAHQQQEAVFEAVAECLPSNFDKTNYNQAKDVLEQLEHGLKQLNKK persistent 146 sarZ HTH-type transcriptional regulator SarZ WP_048761099.1 UPI0006605F42 UniRef100_UPI0006605F42,UniRef50_Q49WS5,UniRef90_A0A549SVW4 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 31044 32387 . + . GCA_005502385.1_01476_gene GCA_005502385.1_01476 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKYDVTFIGSGHAAWHAALTLKHAGKEVAIIEKERIAGTCTNWGCNAKILLENPFEVLEEATHYPGIVESQNLKVNWSNLMDYKHKVIDPMAGQLKSLFEQQGIDVYDGTGVIKNEHTVEVNGESIETENIVVATGQHSNKLPIEGKEYTHDSRDFLSMEDTPKSITFIGGGIISIEFASIMIKTGADVHVVHHTDEILPGFNRNHVDKLVKKLEDEGVKFYLNENTAAVKKEGDAFTLTTESGLSINTEYVLDATGRVPNVEGIGLENVGINYSKKGIEVDEYLRTNVKNIYASGDVLDKTIPKLTPTATFESNYIAAHILGMVQDEIKYPAIPSVLYSLPRLSQIGVTVEDAKENDQYTVKHVPFGKQMVFEYKNETEAEMYIVLDEHKHLVGAEIYADAANDLVNLLVFIINQRLTAKELSQLIFAFPGASSGVIDLLKMNML . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 31044 32387 . + . GCA_005502385.1_01476_mRNA GCA_005502385.1_01476 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKYDVTFIGSGHAAWHAALTLKHAGKEVAIIEKERIAGTCTNWGCNAKILLENPFEVLEEATHYPGIVESQNLKVNWSNLMDYKHKVIDPMAGQLKSLFEQQGIDVYDGTGVIKNEHTVEVNGESIETENIVVATGQHSNKLPIEGKEYTHDSRDFLSMEDTPKSITFIGGGIISIEFASIMIKTGADVHVVHHTDEILPGFNRNHVDKLVKKLEDEGVKFYLNENTAAVKKEGDAFTLTTESGLSINTEYVLDATGRVPNVEGIGLENVGINYSKKGIEVDEYLRTNVKNIYASGDVLDKTIPKLTPTATFESNYIAAHILGMVQDEIKYPAIPSVLYSLPRLSQIGVTVEDAKENDQYTVKHVPFGKQMVFEYKNETEAEMYIVLDEHKHLVGAEIYADAANDLVNLLVFIINQRLTAKELSQLIFAFPGASSGVIDLLKMNML . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 31044 32387 . + 0 GCA_005502385.1_01476 GCA_005502385.1_01476_gene,GCA_005502385.1_01476_mRNA GCA_005502385.1_01476 Dihydrolipoyl dehydrogenase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKYDVTFIGSGHAAWHAALTLKHAGKEVAIIEKERIAGTCTNWGCNAKILLENPFEVLEEATHYPGIVESQNLKVNWSNLMDYKHKVIDPMAGQLKSLFEQQGIDVYDGTGVIKNEHTVEVNGESIETENIVVATGQHSNKLPIEGKEYTHDSRDFLSMEDTPKSITFIGGGIISIEFASIMIKTGADVHVVHHTDEILPGFNRNHVDKLVKKLEDEGVKFYLNENTAAVKKEGDAFTLTTESGLSINTEYVLDATGRVPNVEGIGLENVGINYSKKGIEVDEYLRTNVKNIYASGDVLDKTIPKLTPTATFESNYIAAHILGMVQDEIKYPAIPSVLYSLPRLSQIGVTVEDAKENDQYTVKHVPFGKQMVFEYKNETEAEMYIVLDEHKHLVGAEIYADAANDLVNLLVFIINQRLTAKELSQLIFAFPGASSGVIDLLKMNML persistent 447 NAD(P)/FAD-dependent oxidoreductase WP_137689599.1 UPI0009262DF0 UniRef100_UPI0009262DF0,UniRef50_A0A380HS00,UniRef90_A0A6N0I2R0 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 32522 33379 . + . GCA_005502385.1_01477_gene GCA_005502385.1_01477 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MGKEFESNGVNVEIPDELESVVALEYSFVEALAKLELNVTGIADDKDKNNLENSIKHLVGNYTSVGSRLEPDTELIKKAEPQLILADKTRHESMFEKLNTAAPTVLLESFDANYDQSIETFKQIAELVSKEDKGRELVVQHNEKVEDLSKDIKLDKDVSTIAAVPTHDGLYVHASHSYVGQFLQKVGFNGSIPEDMENHLPEYMGADYLKVDTDRFASFNPERILIMVDEDNKADYEKLKESEAWSNIEAVRNDRVHDVNRERWAKYRGLIASELILEDLTNIEE . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 32522 33379 . + . GCA_005502385.1_01477_mRNA GCA_005502385.1_01477 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MGKEFESNGVNVEIPDELESVVALEYSFVEALAKLELNVTGIADDKDKNNLENSIKHLVGNYTSVGSRLEPDTELIKKAEPQLILADKTRHESMFEKLNTAAPTVLLESFDANYDQSIETFKQIAELVSKEDKGRELVVQHNEKVEDLSKDIKLDKDVSTIAAVPTHDGLYVHASHSYVGQFLQKVGFNGSIPEDMENHLPEYMGADYLKVDTDRFASFNPERILIMVDEDNKADYEKLKESEAWSNIEAVRNDRVHDVNRERWAKYRGLIASELILEDLTNIEE . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 32522 33379 . + 0 GCA_005502385.1_01477 GCA_005502385.1_01477_gene,GCA_005502385.1_01477_mRNA GCA_005502385.1_01477 Fe(3+)-citrate-binding protein YfmC GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MGKEFESNGVNVEIPDELESVVALEYSFVEALAKLELNVTGIADDKDKNNLENSIKHLVGNYTSVGSRLEPDTELIKKAEPQLILADKTRHESMFEKLNTAAPTVLLESFDANYDQSIETFKQIAELVSKEDKGRELVVQHNEKVEDLSKDIKLDKDVSTIAAVPTHDGLYVHASHSYVGQFLQKVGFNGSIPEDMENHLPEYMGADYLKVDTDRFASFNPERILIMVDEDNKADYEKLKESEAWSNIEAVRNDRVHDVNRERWAKYRGLIASELILEDLTNIEE persistent 285 ABC transporter substrate-binding protein WP_049382209.1 UPI00066E1D91 UniRef100_UPI00066E1D91,UniRef50_A0A4V2KWE5,UniRef90_A0A657M2G2 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 33456 34451 . - . GCA_005502385.1_01478_gene GCA_005502385.1_01478 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKSITQPSFMKGIMFTFMIAMISYILAKFPILHTIGALAIAIIFAMLYRQVMGYPEHIRPGITFASKRLLKFAIILYGLKLNMGDILGKGWKLLLIDIIVIIFSISLTLILNQIIKGNQDISILLGIGTGVCGAAAIAATAPILKSKEKDIAISVGIIALVGTIFALIYTAIEAIFNIPTITYGAWTGVSLHEIAHVVLAADIGGPEAMTFALLGKLGRVFLLIPLSIVLILYMRYKSHSSQVQQKIDIPYFLIGFIIMACINTFVPIPSLLMNIINVITTVCMLMAMVALGLNIVLKEVISKALKPFIVICITSICLSSVTLLVTSIIFK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 33456 34451 . - . GCA_005502385.1_01478_mRNA GCA_005502385.1_01478 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKSITQPSFMKGIMFTFMIAMISYILAKFPILHTIGALAIAIIFAMLYRQVMGYPEHIRPGITFASKRLLKFAIILYGLKLNMGDILGKGWKLLLIDIIVIIFSISLTLILNQIIKGNQDISILLGIGTGVCGAAAIAATAPILKSKEKDIAISVGIIALVGTIFALIYTAIEAIFNIPTITYGAWTGVSLHEIAHVVLAADIGGPEAMTFALLGKLGRVFLLIPLSIVLILYMRYKSHSSQVQQKIDIPYFLIGFIIMACINTFVPIPSLLMNIINVITTVCMLMAMVALGLNIVLKEVISKALKPFIVICITSICLSSVTLLVTSIIFK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 33456 34451 . - 0 GCA_005502385.1_01478 GCA_005502385.1_01478_gene,GCA_005502385.1_01478_mRNA GCA_005502385.1_01478 hypothetical protein UPF0324 inner membrane protein YeiH GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKSITQPSFMKGIMFTFMIAMISYILAKFPILHTIGALAIAIIFAMLYRQVMGYPEHIRPGITFASKRLLKFAIILYGLKLNMGDILGKGWKLLLIDIIVIIFSISLTLILNQIIKGNQDISILLGIGTGVCGAAAIAATAPILKSKEKDIAISVGIIALVGTIFALIYTAIEAIFNIPTITYGAWTGVSLHEIAHVVLAADIGGPEAMTFALLGKLGRVFLLIPLSIVLILYMRYKSHSSQVQQKIDIPYFLIGFIIMACINTFVPIPSLLMNIINVITTVCMLMAMVALGLNIVLKEVISKALKPFIVICITSICLSSVTLLVTSIIFK persistent 331 yeiH UPF0324 membrane protein SERP0111 GO:0005886 COG2855,S WP_049416081.1 UPI00066BD455 UniRef100_UPI00066BD455,UniRef50_Q5HRT2,UniRef90_Q5HRT2 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 34565 35386 . + . GCA_005502385.1_01479_gene GCA_005502385.1_01479 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDPYKVLIEVIKTESFTRAAENLYTSQPSVSRDIKRLELKYNVKIFEFKSPYLKLTRDGEKLLQYALQRESIEQELWQNLTSESEIISGTLTIGSSYTYGEYLLSKQLTSLMQQYPKLHIHLRVNNSDSVINDIKHNRVDIGIVEKEIQDNAIECKKIMEDEMVYIYKKSLQPRMDICFVREKGSGTRFYQEVGLSELKLNPYLVEINNIKIIKQMVEAGNGFAIISKSALHPEDYEKLMITTLNVKRHYYLVQHVDKYIDKNIRAVIEMIMK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 34565 35386 . + . GCA_005502385.1_01479_mRNA GCA_005502385.1_01479 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDPYKVLIEVIKTESFTRAAENLYTSQPSVSRDIKRLELKYNVKIFEFKSPYLKLTRDGEKLLQYALQRESIEQELWQNLTSESEIISGTLTIGSSYTYGEYLLSKQLTSLMQQYPKLHIHLRVNNSDSVINDIKHNRVDIGIVEKEIQDNAIECKKIMEDEMVYIYKKSLQPRMDICFVREKGSGTRFYQEVGLSELKLNPYLVEINNIKIIKQMVEAGNGFAIISKSALHPEDYEKLMITTLNVKRHYYLVQHVDKYIDKNIRAVIEMIMK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 34565 35386 . + 0 GCA_005502385.1_01479 GCA_005502385.1_01479_gene,GCA_005502385.1_01479_mRNA GCA_005502385.1_01479 HTH-type transcriptional regulator CysL GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDPYKVLIEVIKTESFTRAAENLYTSQPSVSRDIKRLELKYNVKIFEFKSPYLKLTRDGEKLLQYALQRESIEQELWQNLTSESEIISGTLTIGSSYTYGEYLLSKQLTSLMQQYPKLHIHLRVNNSDSVINDIKHNRVDIGIVEKEIQDNAIECKKIMEDEMVYIYKKSLQPRMDICFVREKGSGTRFYQEVGLSELKLNPYLVEINNIKIIKQMVEAGNGFAIISKSALHPEDYEKLMITTLNVKRHYYLVQHVDKYIDKNIRAVIEMIMK persistent 273 lysR Transcriptional regulator, LysR family COG0583,K WP_048678726.1 UPI0006611B1B UniRef100_UPI0006611B1B,UniRef50_O33812,UniRef90_Q5HRT3 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 35458 36144 . - . GCA_005502385.1_01480_gene GCA_005502385.1_01480 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSKALVVVTSVSKYPDMNRPTGLWLGEVVHFADVLYKNGYDIDYISPEGGYTAIDPASLQEDMMSELDWKYYQDKDFMTRLGSTLTPDAVRAEDYDIIYYAGGHGTIWDFKDNKDLQELTRKIYENNGAVSSVCHGAIGLLNVTDSEGNSIINGKTVTGFSNTEEEAVGLADKVPYLTEDELKNRGAHYEKGDNWSQFAVIDGHVITGQNPQSGKAVAEKFLELKNNK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 35458 36144 . - . GCA_005502385.1_01480_mRNA GCA_005502385.1_01480 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSKALVVVTSVSKYPDMNRPTGLWLGEVVHFADVLYKNGYDIDYISPEGGYTAIDPASLQEDMMSELDWKYYQDKDFMTRLGSTLTPDAVRAEDYDIIYYAGGHGTIWDFKDNKDLQELTRKIYENNGAVSSVCHGAIGLLNVTDSEGNSIINGKTVTGFSNTEEEAVGLADKVPYLTEDELKNRGAHYEKGDNWSQFAVIDGHVITGQNPQSGKAVAEKFLELKNNK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 35458 36144 . - 0 GCA_005502385.1_01480 GCA_005502385.1_01480_gene,GCA_005502385.1_01480_mRNA GCA_005502385.1_01480 Protein/nucleic acid deglycase HchA GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSKALVVVTSVSKYPDMNRPTGLWLGEVVHFADVLYKNGYDIDYISPEGGYTAIDPASLQEDMMSELDWKYYQDKDFMTRLGSTLTPDAVRAEDYDIIYYAGGHGTIWDFKDNKDLQELTRKIYENNGAVSSVCHGAIGLLNVTDSEGNSIINGKTVTGFSNTEEEAVGLADKVPYLTEDELKNRGAHYEKGDNWSQFAVIDGHVITGQNPQSGKAVAEKFLELKNNK persistent 228 Type 1 glutamine amidotransferase domain-containing protein WP_002449405.1 UPI00019FC7F9 UniRef100_A0A6N0I2H3,UniRef50_A0A380FVZ3,UniRef90_A0A6N0I2H3 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 36436 36948 . + . GCA_005502385.1_01481_gene GCA_005502385.1_01481 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MAQDSGKLNWSSLIIGTLLLIIAVVIFSNPVQNFYTLTWLIGLLIMIGGVIQLLFRRTAKKLVGVNTKLILINGIIDLIFGILVVFNVGASSVFFVFMFAFWFIFSSVIGLFTLSQQHQLRGLSIIVNILGIILGIILLFNPMMGMIFVSTLIAFTFAVLGVTYVIDGLA . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 36436 36948 . + . GCA_005502385.1_01481_mRNA GCA_005502385.1_01481 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MAQDSGKLNWSSLIIGTLLLIIAVVIFSNPVQNFYTLTWLIGLLIMIGGVIQLLFRRTAKKLVGVNTKLILINGIIDLIFGILVVFNVGASSVFFVFMFAFWFIFSSVIGLFTLSQQHQLRGLSIIVNILGIILGIILLFNPMMGMIFVSTLIAFTFAVLGVTYVIDGLA . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 36436 36948 . + 0 GCA_005502385.1_01481 GCA_005502385.1_01481_gene,GCA_005502385.1_01481_mRNA GCA_005502385.1_01481 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MAQDSGKLNWSSLIIGTLLLIIAVVIFSNPVQNFYTLTWLIGLLIMIGGVIQLLFRRTAKKLVGVNTKLILINGIIDLIFGILVVFNVGASSVFFVFMFAFWFIFSSVIGLFTLSQQHQLRGLSIIVNILGIILGIILLFNPMMGMIFVSTLIAFTFAVLGVTYVIDGLA persistent 170 hdeD HdeD family acid-resistance protein UniRef50_Q2FUR7,UniRef90_A0A974KYM4 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 37126 38322 . + . GCA_005502385.1_01482_gene GCA_005502385.1_01482 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNYNFDEIIDRRYTNAMNVEGYKGYLFGNTDTSDLKDNDELIRMWVADMDFSTPEVVLNAIRERLNKKILGYTNVFGSEYYEAFVSWTKKRYGFTFPQEHLVFSHGIVAGLIELVGYICDKDDKALIFTPSYGPFKMACDKNHISTVYSPLINHHGYYEIDFDDVRKKIETENIKLCIFANPHNPTGRVWSEKELATLGQIMKDNDVWLISDEIHCDIKRSGQSHMPFAKAVPDYDKIITTMSQSKAFNIAGLMFSNIIIQNESLLKIWNTHHFGTENPLSVVATQAAYEKGENWLQAMNHYLDDNFNYLADFLKKELPHAEFKIPEATYLAWVDLSYYIKEKDIDESMAKFFIKNAGVIIEGAEQFVHNAEGHIRINIAVPREVMKKGLQKIKAALV . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 37126 38322 . + . GCA_005502385.1_01482_mRNA GCA_005502385.1_01482 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNYNFDEIIDRRYTNAMNVEGYKGYLFGNTDTSDLKDNDELIRMWVADMDFSTPEVVLNAIRERLNKKILGYTNVFGSEYYEAFVSWTKKRYGFTFPQEHLVFSHGIVAGLIELVGYICDKDDKALIFTPSYGPFKMACDKNHISTVYSPLINHHGYYEIDFDDVRKKIETENIKLCIFANPHNPTGRVWSEKELATLGQIMKDNDVWLISDEIHCDIKRSGQSHMPFAKAVPDYDKIITTMSQSKAFNIAGLMFSNIIIQNESLLKIWNTHHFGTENPLSVVATQAAYEKGENWLQAMNHYLDDNFNYLADFLKKELPHAEFKIPEATYLAWVDLSYYIKEKDIDESMAKFFIKNAGVIIEGAEQFVHNAEGHIRINIAVPREVMKKGLQKIKAALV . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 37126 38322 . + 0 GCA_005502385.1_01482 GCA_005502385.1_01482_gene,GCA_005502385.1_01482_mRNA GCA_005502385.1_01482 Cystathionine beta-lyase PatB GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNYNFDEIIDRRYTNAMNVEGYKGYLFGNTDTSDLKDNDELIRMWVADMDFSTPEVVLNAIRERLNKKILGYTNVFGSEYYEAFVSWTKKRYGFTFPQEHLVFSHGIVAGLIELVGYICDKDDKALIFTPSYGPFKMACDKNHISTVYSPLINHHGYYEIDFDDVRKKIETENIKLCIFANPHNPTGRVWSEKELATLGQIMKDNDVWLISDEIHCDIKRSGQSHMPFAKAVPDYDKIITTMSQSKAFNIAGLMFSNIIIQNESLLKIWNTHHFGTENPLSVVATQAAYEKGENWLQAMNHYLDDNFNYLADFLKKELPHAEFKIPEATYLAWVDLSYYIKEKDIDESMAKFFIKNAGVIIEGAEQFVHNAEGHIRINIAVPREVMKKGLQKIKAALV persistent 398 3M3SH-releasing C-S lyase WP_131566219.1 UPI00103E0336 UniRef100_UPI00103E0336,UniRef50_A0A380FVC9,UniRef90_A0A3S7GV73 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 38339 38746 . + . GCA_005502385.1_01483_gene GCA_005502385.1_01483 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MAIIEPSHIGHTPFQQLLGHHEDIMKTWTALSDTLENTSALNAELKEEIRRILAQKNGCQYCKAKGKPTGSLTDEKSAICIGFTEVYIKLGDQIPTTYTEVLKSHLSDKEIVELITFITFTNAQQQFGAMMKLEP . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 38339 38746 . + . GCA_005502385.1_01483_mRNA GCA_005502385.1_01483 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MAIIEPSHIGHTPFQQLLGHHEDIMKTWTALSDTLENTSALNAELKEEIRRILAQKNGCQYCKAKGKPTGSLTDEKSAICIGFTEVYIKLGDQIPTTYTEVLKSHLSDKEIVELITFITFTNAQQQFGAMMKLEP . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 38339 38746 . + 0 GCA_005502385.1_01483 GCA_005502385.1_01483_gene,GCA_005502385.1_01483_mRNA GCA_005502385.1_01483 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MAIIEPSHIGHTPFQQLLGHHEDIMKTWTALSDTLENTSALNAELKEEIRRILAQKNGCQYCKAKGKPTGSLTDEKSAICIGFTEVYIKLGDQIPTTYTEVLKSHLSDKEIVELITFITFTNAQQQFGAMMKLEP persistent 135 Carboxymuconolactone decarboxylase family protein WP_070647622.1 UPI0008A6354C UniRef100_UPI0008A6354C,UniRef50_Q65N92,UniRef90_A0A6N0I2M9 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 38792 39409 . - . GCA_005502385.1_01484_gene GCA_005502385.1_01484 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIQTIITAAILYIATAVDLLVILLIFFARAQTKKEYRNIYIGQYVGSVTLIVVSLFFAFVLNYVPEKWILGLLGLIPIYLGLKVAIFDDCEGEKRAKQELDKHGLTKLIGTVALVTIASCGADNIGLFVPYFVTLSVSELIVTLIVFLILIYVLVFTAQKLASIPEIGETVEKFSRWIMAVVYIGLGLFIIIENHTLQTIWGMLF . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 38792 39409 . - . GCA_005502385.1_01484_mRNA GCA_005502385.1_01484 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIQTIITAAILYIATAVDLLVILLIFFARAQTKKEYRNIYIGQYVGSVTLIVVSLFFAFVLNYVPEKWILGLLGLIPIYLGLKVAIFDDCEGEKRAKQELDKHGLTKLIGTVALVTIASCGADNIGLFVPYFVTLSVSELIVTLIVFLILIYVLVFTAQKLASIPEIGETVEKFSRWIMAVVYIGLGLFIIIENHTLQTIWGMLF . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 38792 39409 . - 0 GCA_005502385.1_01484 GCA_005502385.1_01484_gene,GCA_005502385.1_01484_mRNA GCA_005502385.1_01484 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIQTIITAAILYIATAVDLLVILLIFFARAQTKKEYRNIYIGQYVGSVTLIVVSLFFAFVLNYVPEKWILGLLGLIPIYLGLKVAIFDDCEGEKRAKQELDKHGLTKLIGTVALVTIASCGADNIGLFVPYFVTLSVSELIVTLIVFLILIYVLVFTAQKLASIPEIGETVEKFSRWIMAVVYIGLGLFIIIENHTLQTIWGMLF persistent 205 cadD CadD family cadmium resistance transporter WP_002449206.1 UPI00019FC7F5 UniRef100_A0A8X8GJX2,UniRef50_B9E7D8,UniRef90_A0A8X8GJX2 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 39670 41022 . + . GCA_005502385.1_01485_gene GCA_005502385.1_01485 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSESYDLIVIGAGPGGYVSAIRAAQLGKKVAVIEKFNAGGTCLNVGCIPSKTLLEHGEKAHSIQVANDWGMTTKELNIDFPKFVQRKKKVVQTLTGGVKQLLKKNKVAYIEGEASISKDLNVKVNNETYQGKDIILATGSKPFVPPIKGLDNVDYETTDTFFDLKQLPKQLAVIGGGVIATELASSMADLGVKVTIVEVADDILLTEIDDTRELLKAHLENQGINIITKAKIKTVDKTKIVLDGQDDVSFDTLLVATGRQPNTQVAKDLNLEMDGKFFKVDDHYQTSQKHVYAIGDLVKGYQLAHAASAHGIHVAETLAGEHPPLVRQENITRCIYTRLEAASIGLSEEQAKEAGYDVKVTQSAFQGNAKAIIKGENEGIIKLVIDQTYGEILGAFMVGPHATDLIGEVLGVKASEGTIYELSEIIQPHPALLEAIGEGGDAYFGSAIHM . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 39670 41022 . + . GCA_005502385.1_01485_mRNA GCA_005502385.1_01485 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSESYDLIVIGAGPGGYVSAIRAAQLGKKVAVIEKFNAGGTCLNVGCIPSKTLLEHGEKAHSIQVANDWGMTTKELNIDFPKFVQRKKKVVQTLTGGVKQLLKKNKVAYIEGEASISKDLNVKVNNETYQGKDIILATGSKPFVPPIKGLDNVDYETTDTFFDLKQLPKQLAVIGGGVIATELASSMADLGVKVTIVEVADDILLTEIDDTRELLKAHLENQGINIITKAKIKTVDKTKIVLDGQDDVSFDTLLVATGRQPNTQVAKDLNLEMDGKFFKVDDHYQTSQKHVYAIGDLVKGYQLAHAASAHGIHVAETLAGEHPPLVRQENITRCIYTRLEAASIGLSEEQAKEAGYDVKVTQSAFQGNAKAIIKGENEGIIKLVIDQTYGEILGAFMVGPHATDLIGEVLGVKASEGTIYELSEIIQPHPALLEAIGEGGDAYFGSAIHM . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 39670 41022 . + 0 GCA_005502385.1_01485 GCA_005502385.1_01485_gene,GCA_005502385.1_01485_mRNA GCA_005502385.1_01485 Dihydrolipoyl dehydrogenase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSESYDLIVIGAGPGGYVSAIRAAQLGKKVAVIEKFNAGGTCLNVGCIPSKTLLEHGEKAHSIQVANDWGMTTKELNIDFPKFVQRKKKVVQTLTGGVKQLLKKNKVAYIEGEASISKDLNVKVNNETYQGKDIILATGSKPFVPPIKGLDNVDYETTDTFFDLKQLPKQLAVIGGGVIATELASSMADLGVKVTIVEVADDILLTEIDDTRELLKAHLENQGINIITKAKIKTVDKTKIVLDGQDDVSFDTLLVATGRQPNTQVAKDLNLEMDGKFFKVDDHYQTSQKHVYAIGDLVKGYQLAHAASAHGIHVAETLAGEHPPLVRQENITRCIYTRLEAASIGLSEEQAKEAGYDVKVTQSAFQGNAKAIIKGENEGIIKLVIDQTYGEILGAFMVGPHATDLIGEVLGVKASEGTIYELSEIIQPHPALLEAIGEGGDAYFGSAIHM persistent 450 lpdA dihydrolipoyl dehydrogenase 1.8.1.4 GO:0004148,GO:0050660 UniRef50_A0A7Z1N6F1,UniRef90_A0A974QN44 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 41064 42017 . + . GCA_005502385.1_01486_gene GCA_005502385.1_01486 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKMEKEQARWIYKTMNEIRFFEEKVHKIFSDGQIPGFVHLYVGEEAVATGVMSQLTDDDYITSTHRGHGHAIAKGCDLNGMMAEIMGKRDGLGHGKGGSMHVAEIDKGMLGANGIVGGGFGLAIGASISIINQGKDNVAVCFFGDGAANEGTFHEGLNFASILNLPVIFVCENNQFAEGTTHDYASASETIAERASAYNMPGVRVDGMNVLEVYQATQEAVERAKKGEGPTLIECDTYRKYGHFEGDEQKVKSPNDRNADKNATVEFRKQAIEEGWLTEEEADDIEKTAEQAVEDAVKFADESELPDEDSLYKDVFA . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 41064 42017 . + . GCA_005502385.1_01486_mRNA GCA_005502385.1_01486 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKMEKEQARWIYKTMNEIRFFEEKVHKIFSDGQIPGFVHLYVGEEAVATGVMSQLTDDDYITSTHRGHGHAIAKGCDLNGMMAEIMGKRDGLGHGKGGSMHVAEIDKGMLGANGIVGGGFGLAIGASISIINQGKDNVAVCFFGDGAANEGTFHEGLNFASILNLPVIFVCENNQFAEGTTHDYASASETIAERASAYNMPGVRVDGMNVLEVYQATQEAVERAKKGEGPTLIECDTYRKYGHFEGDEQKVKSPNDRNADKNATVEFRKQAIEEGWLTEEEADDIEKTAEQAVEDAVKFADESELPDEDSLYKDVFA . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 41064 42017 . + 0 GCA_005502385.1_01486 GCA_005502385.1_01486_gene,GCA_005502385.1_01486_mRNA GCA_005502385.1_01486 Acetoin:2%2C6-dichlorophenolindophenol oxidoreductase subunit alpha GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKMEKEQARWIYKTMNEIRFFEEKVHKIFSDGQIPGFVHLYVGEEAVATGVMSQLTDDDYITSTHRGHGHAIAKGCDLNGMMAEIMGKRDGLGHGKGGSMHVAEIDKGMLGANGIVGGGFGLAIGASISIINQGKDNVAVCFFGDGAANEGTFHEGLNFASILNLPVIFVCENNQFAEGTTHDYASASETIAERASAYNMPGVRVDGMNVLEVYQATQEAVERAKKGEGPTLIECDTYRKYGHFEGDEQKVKSPNDRNADKNATVEFRKQAIEEGWLTEEEADDIEKTAEQAVEDAVKFADESELPDEDSLYKDVFA persistent 317 acoA Acetoin dehydrogenase, E1 component, alpha subunit C,COG1071 WP_017174766.1 UPI0002D5614F UniRef100_A0A4Q9WR12,UniRef50_A0A0B7GQJ1,UniRef90_Q5HKL8 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 42087 43127 . + . GCA_005502385.1_01487_gene GCA_005502385.1_01487 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSEERKLTFMGAINEAIDQSMEKDENVILIGTDVSGGAKVEHIQDDDTFGGVFGVTKGLAKKYSRKRVIDTPISEHITLSAAVGAAATGLRPIAELMFNDFIGFGLDPILNQGAKMRYMFGGKAKIPLVVRTVHGAGASAAAQHSQSLYNMFATIPGVKVVVPSNPYDAKGLLMSAIQDDNLVVFSEDKTLLGQKSNVPEEPYTIEIGKANVTREGDDLTIVAIGKMVAVAEETADRLEEDNVSVEVIDLRSVSPWDQDTVLESVKKTGRLIVIDESSPQCNIAGDVASVIGDIGFDYLDGPIKKVTAPDTPVPFASNLEAAYIPNADKVLDVASELVDDLKKANA . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 42087 43127 . + . GCA_005502385.1_01487_mRNA GCA_005502385.1_01487 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSEERKLTFMGAINEAIDQSMEKDENVILIGTDVSGGAKVEHIQDDDTFGGVFGVTKGLAKKYSRKRVIDTPISEHITLSAAVGAAATGLRPIAELMFNDFIGFGLDPILNQGAKMRYMFGGKAKIPLVVRTVHGAGASAAAQHSQSLYNMFATIPGVKVVVPSNPYDAKGLLMSAIQDDNLVVFSEDKTLLGQKSNVPEEPYTIEIGKANVTREGDDLTIVAIGKMVAVAEETADRLEEDNVSVEVIDLRSVSPWDQDTVLESVKKTGRLIVIDESSPQCNIAGDVASVIGDIGFDYLDGPIKKVTAPDTPVPFASNLEAAYIPNADKVLDVASELVDDLKKANA . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 42087 43127 . + 0 GCA_005502385.1_01487 GCA_005502385.1_01487_gene,GCA_005502385.1_01487_mRNA GCA_005502385.1_01487 Acetoin:2%2C6-dichlorophenolindophenol oxidoreductase subunit beta GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSEERKLTFMGAINEAIDQSMEKDENVILIGTDVSGGAKVEHIQDDDTFGGVFGVTKGLAKKYSRKRVIDTPISEHITLSAAVGAAATGLRPIAELMFNDFIGFGLDPILNQGAKMRYMFGGKAKIPLVVRTVHGAGASAAAQHSQSLYNMFATIPGVKVVVPSNPYDAKGLLMSAIQDDNLVVFSEDKTLLGQKSNVPEEPYTIEIGKANVTREGDDLTIVAIGKMVAVAEETADRLEEDNVSVEVIDLRSVSPWDQDTVLESVKKTGRLIVIDESSPQCNIAGDVASVIGDIGFDYLDGPIKKVTAPDTPVPFASNLEAAYIPNADKVLDVASELVDDLKKANA persistent 346 acoB Pyruvate dehydrogenase E1 component subunit beta C,COG0022 WP_049416093.1 UPI00066C5F31 UniRef100_UPI00066C5F31,UniRef50_P27746,UniRef90_A0A2A1KEY8 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 43142 44425 . + . GCA_005502385.1_01488_gene GCA_005502385.1_01488 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSENIIMPKLGMTMKEGTVEEWFKSEGDTVEEGESIVTISSEKLTNDVEAPASGTLLKIKVQAGEDAKVKAVLGIIGEEGEDIGSDDDDSEETTQENKDNDTTSENQQASSNEEQSDKKDTENEAKPEQRERIFISPLARNMAEDKDLDITRIKGTGGNDRITKLDIQRVESEGYDYEGEAGTSDQSASSTAQNVDVSSIGEGLNPMRQRIAQNMRQSLNNTAQLTLHRKVNADRLLDFKARLSEELKDADQDVKLTVTTLLAKAVVLSLKEYGAMNARYENGELTEYDDVHLGIATSLEDGLMVPVIDNADTKSIGTLAKEIKTSAEAVREGNTGDVQLSDATFTITNMGASGIEYFTPILNLGETGILGVGALAKELVLEGDNVKQISRIPLSLTFDHQILDGAGAADFLKVLAKYIENPYLLML . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 43142 44425 . + . GCA_005502385.1_01488_mRNA GCA_005502385.1_01488 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSENIIMPKLGMTMKEGTVEEWFKSEGDTVEEGESIVTISSEKLTNDVEAPASGTLLKIKVQAGEDAKVKAVLGIIGEEGEDIGSDDDDSEETTQENKDNDTTSENQQASSNEEQSDKKDTENEAKPEQRERIFISPLARNMAEDKDLDITRIKGTGGNDRITKLDIQRVESEGYDYEGEAGTSDQSASSTAQNVDVSSIGEGLNPMRQRIAQNMRQSLNNTAQLTLHRKVNADRLLDFKARLSEELKDADQDVKLTVTTLLAKAVVLSLKEYGAMNARYENGELTEYDDVHLGIATSLEDGLMVPVIDNADTKSIGTLAKEIKTSAEAVREGNTGDVQLSDATFTITNMGASGIEYFTPILNLGETGILGVGALAKELVLEGDNVKQISRIPLSLTFDHQILDGAGAADFLKVLAKYIENPYLLML . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 43142 44425 . + 0 GCA_005502385.1_01488 GCA_005502385.1_01488_gene,GCA_005502385.1_01488_mRNA GCA_005502385.1_01488 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSENIIMPKLGMTMKEGTVEEWFKSEGDTVEEGESIVTISSEKLTNDVEAPASGTLLKIKVQAGEDAKVKAVLGIIGEEGEDIGSDDDDSEETTQENKDNDTTSENQQASSNEEQSDKKDTENEAKPEQRERIFISPLARNMAEDKDLDITRIKGTGGNDRITKLDIQRVESEGYDYEGEAGTSDQSASSTAQNVDVSSIGEGLNPMRQRIAQNMRQSLNNTAQLTLHRKVNADRLLDFKARLSEELKDADQDVKLTVTTLLAKAVVLSLKEYGAMNARYENGELTEYDDVHLGIATSLEDGLMVPVIDNADTKSIGTLAKEIKTSAEAVREGNTGDVQLSDATFTITNMGASGIEYFTPILNLGETGILGVGALAKELVLEGDNVKQISRIPLSLTFDHQILDGAGAADFLKVLAKYIENPYLLML persistent 427 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex UniRef50_Q5HKM0,UniRef90_A0A3S7GZG8 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 44578 44916 . + . GCA_005502385.1_01489_gene GCA_005502385.1_01489 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTISNQMMKGLLDGAILGLIAKGETYGYEILEKLKEHQFPEISDGSIYPVLLRLDKKGYVHTTMRKSDNGGPKRKYYTISESGLKELQQFKKKWQALNEGMNHIFRSDNNDK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 44578 44916 . + . GCA_005502385.1_01489_mRNA GCA_005502385.1_01489 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTISNQMMKGLLDGAILGLIAKGETYGYEILEKLKEHQFPEISDGSIYPVLLRLDKKGYVHTTMRKSDNGGPKRKYYTISESGLKELQQFKKKWQALNEGMNHIFRSDNNDK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 44578 44916 . + 0 GCA_005502385.1_01489 GCA_005502385.1_01489_gene,GCA_005502385.1_01489_mRNA GCA_005502385.1_01489 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTISNQMMKGLLDGAILGLIAKGETYGYEILEKLKEHQFPEISDGSIYPVLLRLDKKGYVHTTMRKSDNGGPKRKYYTISESGLKELQQFKKKWQALNEGMNHIFRSDNNDK shell 112 padR PadR family transcriptional regulator WP_048680855.1 UPI00066174E0 UniRef100_A0A974KX72,UniRef50_Q2FUS4,UniRef90_A0A657M263 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 44906 45679 . + . GCA_005502385.1_01490_gene GCA_005502385.1_01490 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MISKEKEDYLFKLKAELLFRGKDEHEVNDIIEELRDHFELAEKNHDDVSDILNTPVKDYADQFSEYIILTRGLFKYLALFSAFMLAIFIIPNFFTEQLNVTIGFIINILFIFCITTILPFFLIRNGLVKYGEQRRVYIYAFIWGAVIFGLILLSTYLTKRYSIYHIITLTESKSVIIGLILLLIVMTLCFMLKQRLFALVIFIVCLPDIIGWVVKICSRSESQSIIVSLIVAIALLLILNIAFFISTFKKRKNKVKE . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 44906 45679 . + . GCA_005502385.1_01490_mRNA GCA_005502385.1_01490 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MISKEKEDYLFKLKAELLFRGKDEHEVNDIIEELRDHFELAEKNHDDVSDILNTPVKDYADQFSEYIILTRGLFKYLALFSAFMLAIFIIPNFFTEQLNVTIGFIINILFIFCITTILPFFLIRNGLVKYGEQRRVYIYAFIWGAVIFGLILLSTYLTKRYSIYHIITLTESKSVIIGLILLLIVMTLCFMLKQRLFALVIFIVCLPDIIGWVVKICSRSESQSIIVSLIVAIALLLILNIAFFISTFKKRKNKVKE . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 44906 45679 . + 0 GCA_005502385.1_01490 GCA_005502385.1_01490_gene,GCA_005502385.1_01490_mRNA GCA_005502385.1_01490 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MISKEKEDYLFKLKAELLFRGKDEHEVNDIIEELRDHFELAEKNHDDVSDILNTPVKDYADQFSEYIILTRGLFKYLALFSAFMLAIFIIPNFFTEQLNVTIGFIINILFIFCITTILPFFLIRNGLVKYGEQRRVYIYAFIWGAVIFGLILLSTYLTKRYSIYHIITLTESKSVIIGLILLLIVMTLCFMLKQRLFALVIFIVCLPDIIGWVVKICSRSESQSIIVSLIVAIALLLILNIAFFISTFKKRKNKVKE shell 257 DUF1129 domain-containing protein WP_048680853.1 UPI00066024E9 UniRef100_UPI00066024E9,UniRef50_A0A7Z1N6M2,UniRef90_A0A6N0I4K7 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 45686 45901 . + . GCA_005502385.1_01491_gene GCA_005502385.1_01491 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSENQNQGCIKCGHTEVEEGTLSATGSGLSKFLDVQHNNFKTITCKNCGYTEFYKQDRNRSRDFIDLFFGG . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 45686 45901 . + . GCA_005502385.1_01491_mRNA GCA_005502385.1_01491 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSENQNQGCIKCGHTEVEEGTLSATGSGLSKFLDVQHNNFKTITCKNCGYTEFYKQDRNRSRDFIDLFFGG . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 45686 45901 . + 0 GCA_005502385.1_01491 GCA_005502385.1_01491_gene,GCA_005502385.1_01491_mRNA GCA_005502385.1_01491 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSENQNQGCIKCGHTEVEEGTLSATGSGLSKFLDVQHNNFKTITCKNCGYTEFYKQDRNRSRDFIDLFFGG persistent 71 GTP-binding protein WP_017174769.1 UPI000301AFAB UniRef100_A0A4Q9WRH6,UniRef50_A0A5D5AMC9,UniRef90_A0A657M1U6 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 46089 46193 . + . GCA_005502385.1_01492_gene GCA_005502385.1_01492 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 46089 46193 . + . GCA_005502385.1_01492_mRNA GCA_005502385.1_01492 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 . . . . . . . GCA_005502385.1|SCOV01000004.1 Infernal:001001 misc_RNA 46089 46193 75.7 + . GCA_005502385.1_01492 GCA_005502385.1_01492_gene,GCA_005502385.1_01492_mRNA GCA_005502385.1_01492 TPP GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 46396 48138 . + . GCA_005502385.1_01493_gene GCA_005502385.1_01493 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKQEKINFKRTFPASKRIFKKGEGNDSDIFVPFREIELSDTQLEQRSFQNEPVVVYDTAGPYHDDSYEVDINHGLPKVRDAWIEAREDVEHYEGRRIQSIDNGFSKEGHKNYVAHPFEYQPRRGSKDTPVTQMYYAKQGIITKEMKFVAIREQVEPEFVREEIARGRAIIPNNINHPESEPMIIGKNFSVKINANIGNSIVSSSIEAEIEKLVWATHWGADTIMDLSTGKNIHTTREYLLRNSPVPVGTVPIYQALEKVNGVAEDLTWEAYRDTLIEQAEQGVDYFTIHAGLRLHYIPLTVDRLTGIVSRGGSIIAQWCLAHHEESFLYTHFDEICEILSQYDVAISLGDGLRPGSIYDANDESQFAELKTLGELTDIAWKHNVQVMIEGPGHIPMHKIKENQDLADFYCKEAPFYTLGPLVTDIAPAYDHITSAIGAAQIASHGTAMLCYVTPKEHLGLPNKDDVRDGVVTYKIAAHAADLSKGLPGATERDDAISKARFEFRWIDQFNLALDPDRAREFHDETLPAESAKIAHFCSMCGPKFCSMRLSHDIRDSYKEQLEGMKEKAEEFREGGNRIYH . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 46396 48138 . + . GCA_005502385.1_01493_mRNA GCA_005502385.1_01493 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKQEKINFKRTFPASKRIFKKGEGNDSDIFVPFREIELSDTQLEQRSFQNEPVVVYDTAGPYHDDSYEVDINHGLPKVRDAWIEAREDVEHYEGRRIQSIDNGFSKEGHKNYVAHPFEYQPRRGSKDTPVTQMYYAKQGIITKEMKFVAIREQVEPEFVREEIARGRAIIPNNINHPESEPMIIGKNFSVKINANIGNSIVSSSIEAEIEKLVWATHWGADTIMDLSTGKNIHTTREYLLRNSPVPVGTVPIYQALEKVNGVAEDLTWEAYRDTLIEQAEQGVDYFTIHAGLRLHYIPLTVDRLTGIVSRGGSIIAQWCLAHHEESFLYTHFDEICEILSQYDVAISLGDGLRPGSIYDANDESQFAELKTLGELTDIAWKHNVQVMIEGPGHIPMHKIKENQDLADFYCKEAPFYTLGPLVTDIAPAYDHITSAIGAAQIASHGTAMLCYVTPKEHLGLPNKDDVRDGVVTYKIAAHAADLSKGLPGATERDDAISKARFEFRWIDQFNLALDPDRAREFHDETLPAESAKIAHFCSMCGPKFCSMRLSHDIRDSYKEQLEGMKEKAEEFREGGNRIYH . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 46396 48138 . + 0 GCA_005502385.1_01493 GCA_005502385.1_01493_gene,GCA_005502385.1_01493_mRNA GCA_005502385.1_01493 Phosphomethylpyrimidine synthase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKQEKINFKRTFPASKRIFKKGEGNDSDIFVPFREIELSDTQLEQRSFQNEPVVVYDTAGPYHDDSYEVDINHGLPKVRDAWIEAREDVEHYEGRRIQSIDNGFSKEGHKNYVAHPFEYQPRRGSKDTPVTQMYYAKQGIITKEMKFVAIREQVEPEFVREEIARGRAIIPNNINHPESEPMIIGKNFSVKINANIGNSIVSSSIEAEIEKLVWATHWGADTIMDLSTGKNIHTTREYLLRNSPVPVGTVPIYQALEKVNGVAEDLTWEAYRDTLIEQAEQGVDYFTIHAGLRLHYIPLTVDRLTGIVSRGGSIIAQWCLAHHEESFLYTHFDEICEILSQYDVAISLGDGLRPGSIYDANDESQFAELKTLGELTDIAWKHNVQVMIEGPGHIPMHKIKENQDLADFYCKEAPFYTLGPLVTDIAPAYDHITSAIGAAQIASHGTAMLCYVTPKEHLGLPNKDDVRDGVVTYKIAAHAADLSKGLPGATERDDAISKARFEFRWIDQFNLALDPDRAREFHDETLPAESAKIAHFCSMCGPKFCSMRLSHDIRDSYKEQLEGMKEKAEEFREGGNRIYH persistent 580 thiC phosphomethylpyrimidine synthase ThiC 4.1.99.17 GO:0009228,GO:0051536 WP_049416101.1 UPI00066CA3B3 UniRef100_UPI00066CA3B3,UniRef50_Q82FI7,UniRef90_A0A3S7GV62 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 48275 49180 . + . GCA_005502385.1_01494_gene GCA_005502385.1_01494 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDNHAEFKKGILFALGAHLLWGILPIYWRFIHGISAFEILAYRIILAMVFMILMIFILKKSQALKHDINQLVAHPIQLVAIIIAGYVITINWGTFIWAVSNGHVLQTSLGYYINPLVSVLLAFIFLKERFNKFETLAIVSAAIGVIYMTMKIGEFPIISLMLAFSFGIYGLLKKLVRVEAMSGIAIECIVTAPAGLIYIIYLWQAHQSSVGLNMSTFLLLFSGAVTAVPLILFSAGARRIPLSLTGFIQYVSPTIIFLLGIFVFKETFDIHQFITFIFIWIGIALYSISQYIKMKRSPRPE . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 48275 49180 . + . GCA_005502385.1_01494_mRNA GCA_005502385.1_01494 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDNHAEFKKGILFALGAHLLWGILPIYWRFIHGISAFEILAYRIILAMVFMILMIFILKKSQALKHDINQLVAHPIQLVAIIIAGYVITINWGTFIWAVSNGHVLQTSLGYYINPLVSVLLAFIFLKERFNKFETLAIVSAAIGVIYMTMKIGEFPIISLMLAFSFGIYGLLKKLVRVEAMSGIAIECIVTAPAGLIYIIYLWQAHQSSVGLNMSTFLLLFSGAVTAVPLILFSAGARRIPLSLTGFIQYVSPTIIFLLGIFVFKETFDIHQFITFIFIWIGIALYSISQYIKMKRSPRPE . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 48275 49180 . + 0 GCA_005502385.1_01494 GCA_005502385.1_01494_gene,GCA_005502385.1_01494_mRNA GCA_005502385.1_01494 Protein RarD GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDNHAEFKKGILFALGAHLLWGILPIYWRFIHGISAFEILAYRIILAMVFMILMIFILKKSQALKHDINQLVAHPIQLVAIIIAGYVITINWGTFIWAVSNGHVLQTSLGYYINPLVSVLLAFIFLKERFNKFETLAIVSAAIGVIYMTMKIGEFPIISLMLAFSFGIYGLLKKLVRVEAMSGIAIECIVTAPAGLIYIIYLWQAHQSSVGLNMSTFLLLFSGAVTAVPLILFSAGARRIPLSLTGFIQYVSPTIIFLLGIFVFKETFDIHQFITFIFIWIGIALYSISQYIKMKRSPRPE persistent 301 rarD EamA family transporter RarD GO:0005215,GO:0005886,GO:0006810 WP_017174771.1 UPI0002E68276 UniRef100_A0A3S7GYY2,UniRef50_Q2FUS1,UniRef90_A0A3S7GYY2 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 49253 49387 . - . GCA_005502385.1_01495_gene GCA_005502385.1_01495 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MAGYKSPGRKISEYIGIIAIVAVFAGVFYKNLKNENQTGNGSLG . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 49253 49387 . - . GCA_005502385.1_01495_mRNA GCA_005502385.1_01495 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MAGYKSPGRKISEYIGIIAIVAVFAGVFYKNLKNENQTGNGSLG . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 49253 49387 . - 0 GCA_005502385.1_01495 GCA_005502385.1_01495_gene,GCA_005502385.1_01495_mRNA GCA_005502385.1_01495 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MAGYKSPGRKISEYIGIIAIVAVFAGVFYKNLKNENQTGNGSLG persistent 44 hypothetical protein . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 49412 49534 . - . GCA_005502385.1_01496_gene GCA_005502385.1_01496 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKIIDVAMYLVHSTIPLLKLTMDMFFYFENGNTSLYALTT . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 49412 49534 . - . GCA_005502385.1_01496_mRNA GCA_005502385.1_01496 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKIIDVAMYLVHSTIPLLKLTMDMFFYFENGNTSLYALTT . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 49412 49534 . - 0 GCA_005502385.1_01496 GCA_005502385.1_01496_gene,GCA_005502385.1_01496_mRNA GCA_005502385.1_01496 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKIIDVAMYLVHSTIPLLKLTMDMFFYFENGNTSLYALTT shell 40 hypothetical protein . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 49720 49893 . - . GCA_005502385.1_01497_gene GCA_005502385.1_01497 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKTIRYFLYFFIVYFIIFYLAQRLLKLDLGIVRCFISSVVFAIMMSYFAYFAKKLNR . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 49720 49893 . - . GCA_005502385.1_01497_mRNA GCA_005502385.1_01497 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKTIRYFLYFFIVYFIIFYLAQRLLKLDLGIVRCFISSVVFAIMMSYFAYFAKKLNR . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 49720 49893 . - 0 GCA_005502385.1_01497 GCA_005502385.1_01497_gene,GCA_005502385.1_01497_mRNA GCA_005502385.1_01497 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKTIRYFLYFFIVYFIIFYLAQRLLKLDLGIVRCFISSVVFAIMMSYFAYFAKKLNR persistent 57 hypothetical protein WP_186364546.1 UPI00044FD64B UniRef100_UPI00044FD64B,UniRef50_UPI00044FD64B,UniRef90_UPI000DFE5CAF . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 50138 50656 . + . GCA_005502385.1_01498_gene GCA_005502385.1_01498 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKFAKAMVVGGITLGTVLGFNVTEHNGVSNEAQAQTHTSQGYYYHYHGYTKSGGEFVLNHTFYNALKAGNVTFNGIKVNEQYQNGTSTKKVYDQTFNQVKGNTAAMIDFKVAPKKVSLEQVKDVYGDHYQYQPSLTEKQTDETNGLYGYTVGKGHITFHVTDGYVDHVTVS . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 50138 50656 . + . GCA_005502385.1_01498_mRNA GCA_005502385.1_01498 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKFAKAMVVGGITLGTVLGFNVTEHNGVSNEAQAQTHTSQGYYYHYHGYTKSGGEFVLNHTFYNALKAGNVTFNGIKVNEQYQNGTSTKKVYDQTFNQVKGNTAAMIDFKVAPKKVSLEQVKDVYGDHYQYQPSLTEKQTDETNGLYGYTVGKGHITFHVTDGYVDHVTVS . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 50138 50656 . + 0 GCA_005502385.1_01498 GCA_005502385.1_01498_gene,GCA_005502385.1_01498_mRNA GCA_005502385.1_01498 Immunodominant staphylococcal antigen B GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKFAKAMVVGGITLGTVLGFNVTEHNGVSNEAQAQTHTSQGYYYHYHGYTKSGGEFVLNHTFYNALKAGNVTFNGIKVNEQYQNGTSTKKVYDQTFNQVKGNTAAMIDFKVAPKKVSLEQVKDVYGDHYQYQPSLTEKQTDETNGLYGYTVGKGHITFHVTDGYVDHVTVS persistent 172 isaB immunodominant staphylococcal antigen IsaB family protein WP_017174773.1 UPI000309D32F UniRef100_A0A8X8GQ35,UniRef50_A0AAE5QYV7,UniRef90_A0A8X8GQ35 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 50706 50870 . - . GCA_005502385.1_01499_gene GCA_005502385.1_01499 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKFISIVLGLLVIISWLFVLREYQHGHEKTEKGKLVIIIACILTFIMTFINILD . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 50706 50870 . - . GCA_005502385.1_01499_mRNA GCA_005502385.1_01499 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKFISIVLGLLVIISWLFVLREYQHGHEKTEKGKLVIIIACILTFIMTFINILD . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 50706 50870 . - 0 GCA_005502385.1_01499 GCA_005502385.1_01499_gene,GCA_005502385.1_01499_mRNA GCA_005502385.1_01499 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKFISIVLGLLVIISWLFVLREYQHGHEKTEKGKLVIIIACILTFIMTFINILD shell 54 Mid2-like cell wall stress sensor domain protein WP_017174774.1 UPI00030B1DAA UniRef100_A0A8X8GMA4,UniRef50_A0A8X8GMA4,UniRef90_A0A8X8GMA4 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 52068 52247 . + . GCA_005502385.1_01500_gene GCA_005502385.1_01500 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MELSNVIKNYRKLNNWSQDELADILNVSRQSVSKWESDKNYPSLDILVVMNDLFGVTLD . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 52068 52247 . + . GCA_005502385.1_01500_mRNA GCA_005502385.1_01500 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MELSNVIKNYRKLNNWSQDELADILNVSRQSVSKWESDKNYPSLDILVVMNDLFGVTLD . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 52068 52247 . + 0 GCA_005502385.1_01500 GCA_005502385.1_01500_gene,GCA_005502385.1_01500_mRNA GCA_005502385.1_01500 HTH-type transcriptional activator BcrR GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MELSNVIKNYRKLNNWSQDELADILNVSRQSVSKWESDKNYPSLDILVVMNDLFGVTLD shell 59 DNA-binding protein WP_037541680.1 UPI00044A092D UniRef100_A0A3S7GVG3,UniRef50_D2J621,UniRef90_A0A3S7GVG3 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 52544 52750 . + . GCA_005502385.1_01501_gene GCA_005502385.1_01501 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MILDILGYVFGIGFIVFGISALVSCGSEVYKVISKNKEKGNYKKSFYFAGMAIICAIALIIMASVFIF . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 52544 52750 . + . GCA_005502385.1_01501_mRNA GCA_005502385.1_01501 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MILDILGYVFGIGFIVFGISALVSCGSEVYKVISKNKEKGNYKKSFYFAGMAIICAIALIIMASVFIF . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 52544 52750 . + 0 GCA_005502385.1_01501 GCA_005502385.1_01501_gene,GCA_005502385.1_01501_mRNA GCA_005502385.1_01501 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MILDILGYVFGIGFIVFGISALVSCGSEVYKVISKNKEKGNYKKSFYFAGMAIICAIALIIMASVFIF shell 68 Mid2-like cell wall stress sensor domain protein WP_017174778.1 UPI00031216E9 UniRef100_A0A3S7GVP9,UniRef50_A0A3S7GVP9,UniRef90_A0A3S7GVP9 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 52993 53205 . + . GCA_005502385.1_01502_gene GCA_005502385.1_01502 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSIKQILDYLLNKKWGWDDLIWIFFAIVIASMFTTPLLGVPIGIVVYFLLFNISDETKEEAKKYDLKKKK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 52993 53205 . + . GCA_005502385.1_01502_mRNA GCA_005502385.1_01502 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSIKQILDYLLNKKWGWDDLIWIFFAIVIASMFTTPLLGVPIGIVVYFLLFNISDETKEEAKKYDLKKKK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 52993 53205 . + 0 GCA_005502385.1_01502 GCA_005502385.1_01502_gene,GCA_005502385.1_01502_mRNA GCA_005502385.1_01502 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSIKQILDYLLNKKWGWDDLIWIFFAIVIASMFTTPLLGVPIGIVVYFLLFNISDETKEEAKKYDLKKKK shell 70 vraH VraH family protein WP_017174779.1 UPI0002E423AC UniRef100_A0A3S7GVL2,UniRef50_A0A2T4S8K5,UniRef90_A0A3S7GVL2 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 53654 53812 . - . GCA_005502385.1_01503_gene GCA_005502385.1_01503 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MFLEKLKCSHCEKEIDKNENIAIHTNSKNLNGVTNLKSWAKSQKVLCEKCSK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 53654 53812 . - . GCA_005502385.1_01503_mRNA GCA_005502385.1_01503 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MFLEKLKCSHCEKEIDKNENIAIHTNSKNLNGVTNLKSWAKSQKVLCEKCSK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 53654 53812 . - 0 GCA_005502385.1_01503 GCA_005502385.1_01503_gene,GCA_005502385.1_01503_mRNA GCA_005502385.1_01503 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MFLEKLKCSHCEKEIDKNENIAIHTNSKNLNGVTNLKSWAKSQKVLCEKCSK shell 52 Fe3+ hydroxamate ABC transporter substrate-binding protein WP_017174780.1 UPI00031FE2F9 UniRef100_UPI00031FE2F9,UniRef50_A0A9Q4H4R6,UniRef90_UPI00031FE2F9 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 53857 54504 . - . GCA_005502385.1_01504_gene GCA_005502385.1_01504 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTLVSKNKKKGLIMLNIKDQNYFKRAIKIFILSTMLLLVTIPIALFFHPSEEFIKQLGSNSPESVSKTQGLKKVWGFIQNNGFHVPIQMLLLALIPIPFLYTLNLIVSLIIPGILFGFFIHFDTYKGLTSLIAYIPHYTLEMMSFCIFTSGLYMLNKSILRKITNLFRKEKKQNYSFKLSLINLLKAYLFVCLPLVILAAFTETYIADMLLNLMN . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 53857 54504 . - . GCA_005502385.1_01504_mRNA GCA_005502385.1_01504 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTLVSKNKKKGLIMLNIKDQNYFKRAIKIFILSTMLLLVTIPIALFFHPSEEFIKQLGSNSPESVSKTQGLKKVWGFIQNNGFHVPIQMLLLALIPIPFLYTLNLIVSLIIPGILFGFFIHFDTYKGLTSLIAYIPHYTLEMMSFCIFTSGLYMLNKSILRKITNLFRKEKKQNYSFKLSLINLLKAYLFVCLPLVILAAFTETYIADMLLNLMN . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 53857 54504 . - 0 GCA_005502385.1_01504 GCA_005502385.1_01504_gene,GCA_005502385.1_01504_mRNA GCA_005502385.1_01504 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTLVSKNKKKGLIMLNIKDQNYFKRAIKIFILSTMLLLVTIPIALFFHPSEEFIKQLGSNSPESVSKTQGLKKVWGFIQNNGFHVPIQMLLLALIPIPFLYTLNLIVSLIIPGILFGFFIHFDTYKGLTSLIAYIPHYTLEMMSFCIFTSGLYMLNKSILRKITNLFRKEKKQNYSFKLSLINLLKAYLFVCLPLVILAAFTETYIADMLLNLMN shell 215 Stage II sporulation protein M UniRef50_Q4L9X6,UniRef90_A0AAE5JMX7 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 55036 57294 . + . GCA_005502385.1_01505_gene GCA_005502385.1_01505 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDFINITGASQNNLKNIDVNIPKHLVTVFTGRSGSGKSSLVFNTIAAESEQLLNESYSSYIQFHLNQQPRPKVKKIKNLPVAMTINQKRFNGNSRSTVGTVSDIYASVRLLWSRIGEPFVGYSDVYSFNSPKGMCKTCEGLGYIEDINLDELLDWDKSLNEGAIDFPSFGPDKERGKAYRDSGLFDNNKKLKDYTKDELELFLYQEPMTLKNPPKEWRKSAKYVGLIPRFSRIFLGDKEFNKKRYAKHLKNVVNNKICPTCKGQRLNSKILSSKIMSKNISDFTQMTIKENLEFLNKLEDPTAKYIIDPLKKQLEALKYIGLSYLTLNRVTTTLSGGEAQRLKLIRHLNSSLSDLVYIIDEPSVGLHPEDIAKINEILKSLKDKGNTVLIVEHDPDVIKEGDYIIDMGPGSGKNGGEITFEGTYNELLSSNTSTGNALRHKHNLKENIREANHFYNIGPVTQNNLNNVKTSIPKHVLTVLTGVAGSGKSTLVKAGFENNDHTIFIDQKAVQGSNRSNLLTYLGVFDSVRSFFSKETGLNKAMFSYNSKGACPNCGGKGYIKTELAFMGDFSQTCEVCHGKRYKQEVLDATIDGYSIADVLDLTVDEGIIFFDKKNDIKSKLQSVSKTGLNYMSLGQPLSTLSGGEIQRVKLAQHLDEEIKNSIFIFDEPTTGLHESDIPILMECFDDLIDQNNTVILIEHNLSIMCEADWIIDVGPGPGLDGGKVQFSGTPKNFIDSSETLTSKHLKRYINQ . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 55036 57294 . + . GCA_005502385.1_01505_mRNA GCA_005502385.1_01505 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDFINITGASQNNLKNIDVNIPKHLVTVFTGRSGSGKSSLVFNTIAAESEQLLNESYSSYIQFHLNQQPRPKVKKIKNLPVAMTINQKRFNGNSRSTVGTVSDIYASVRLLWSRIGEPFVGYSDVYSFNSPKGMCKTCEGLGYIEDINLDELLDWDKSLNEGAIDFPSFGPDKERGKAYRDSGLFDNNKKLKDYTKDELELFLYQEPMTLKNPPKEWRKSAKYVGLIPRFSRIFLGDKEFNKKRYAKHLKNVVNNKICPTCKGQRLNSKILSSKIMSKNISDFTQMTIKENLEFLNKLEDPTAKYIIDPLKKQLEALKYIGLSYLTLNRVTTTLSGGEAQRLKLIRHLNSSLSDLVYIIDEPSVGLHPEDIAKINEILKSLKDKGNTVLIVEHDPDVIKEGDYIIDMGPGSGKNGGEITFEGTYNELLSSNTSTGNALRHKHNLKENIREANHFYNIGPVTQNNLNNVKTSIPKHVLTVLTGVAGSGKSTLVKAGFENNDHTIFIDQKAVQGSNRSNLLTYLGVFDSVRSFFSKETGLNKAMFSYNSKGACPNCGGKGYIKTELAFMGDFSQTCEVCHGKRYKQEVLDATIDGYSIADVLDLTVDEGIIFFDKKNDIKSKLQSVSKTGLNYMSLGQPLSTLSGGEIQRVKLAQHLDEEIKNSIFIFDEPTTGLHESDIPILMECFDDLIDQNNTVILIEHNLSIMCEADWIIDVGPGPGLDGGKVQFSGTPKNFIDSSETLTSKHLKRYINQ . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 55036 57294 . + 0 GCA_005502385.1_01505 GCA_005502385.1_01505_gene,GCA_005502385.1_01505_mRNA GCA_005502385.1_01505 UvrABC system protein A GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDFINITGASQNNLKNIDVNIPKHLVTVFTGRSGSGKSSLVFNTIAAESEQLLNESYSSYIQFHLNQQPRPKVKKIKNLPVAMTINQKRFNGNSRSTVGTVSDIYASVRLLWSRIGEPFVGYSDVYSFNSPKGMCKTCEGLGYIEDINLDELLDWDKSLNEGAIDFPSFGPDKERGKAYRDSGLFDNNKKLKDYTKDELELFLYQEPMTLKNPPKEWRKSAKYVGLIPRFSRIFLGDKEFNKKRYAKHLKNVVNNKICPTCKGQRLNSKILSSKIMSKNISDFTQMTIKENLEFLNKLEDPTAKYIIDPLKKQLEALKYIGLSYLTLNRVTTTLSGGEAQRLKLIRHLNSSLSDLVYIIDEPSVGLHPEDIAKINEILKSLKDKGNTVLIVEHDPDVIKEGDYIIDMGPGSGKNGGEITFEGTYNELLSSNTSTGNALRHKHNLKENIREANHFYNIGPVTQNNLNNVKTSIPKHVLTVLTGVAGSGKSTLVKAGFENNDHTIFIDQKAVQGSNRSNLLTYLGVFDSVRSFFSKETGLNKAMFSYNSKGACPNCGGKGYIKTELAFMGDFSQTCEVCHGKRYKQEVLDATIDGYSIADVLDLTVDEGIIFFDKKNDIKSKLQSVSKTGLNYMSLGQPLSTLSGGEIQRVKLAQHLDEEIKNSIFIFDEPTTGLHESDIPILMECFDDLIDQNNTVILIEHNLSIMCEADWIIDVGPGPGLDGGKVQFSGTPKNFIDSSETLTSKHLKRYINQ persistent 752 UvrABC system protein A WP_049416111.1 UPI00066B8F8A UniRef100_UPI00066B8F8A,UniRef50_M1MTG2,UniRef90_Q5HQF5 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 57569 57763 . - . GCA_005502385.1_01506_gene GCA_005502385.1_01506 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKSVTYQGYKNMEVCEVNNPTEIITHTMPLEDVKEVYDIFDQKKDNTIKVILKPQYYIDKDALL . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 57569 57763 . - . GCA_005502385.1_01506_mRNA GCA_005502385.1_01506 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKSVTYQGYKNMEVCEVNNPTEIITHTMPLEDVKEVYDIFDQKKDNTIKVILKPQYYIDKDALL . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 57569 57763 . - 0 GCA_005502385.1_01506 GCA_005502385.1_01506_gene,GCA_005502385.1_01506_mRNA GCA_005502385.1_01506 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKSVTYQGYKNMEVCEVNNPTEIITHTMPLEDVKEVYDIFDQKKDNTIKVILKPQYYIDKDALL persistent 64 Alcohol dehydrogenase UPI0002D8EC61 UniRef100_A0A4Q9WQ57,UniRef50_A0A0F5HK09,UniRef90_A0A4Q9WQ57 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 58288 58386 . - . GCA_005502385.1_01507_gene GCA_005502385.1_01507 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 58288 58386 . - . GCA_005502385.1_01507_mRNA GCA_005502385.1_01507 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 . . . . . . . GCA_005502385.1|SCOV01000004.1 Infernal:001001 misc_RNA 58288 58386 84.0 - . GCA_005502385.1_01507 GCA_005502385.1_01507_gene,GCA_005502385.1_01507_mRNA GCA_005502385.1_01507 fstAT GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 58607 59020 . + . GCA_005502385.1_01508_gene GCA_005502385.1_01508 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MPIEIKNGGWIRIEDCGKNVKKLKKLDVIQRDLDTYHSLKDDMYQIFMYVKIFYFQQTPFDIRYISDIENYLLNFEINPHKSFMKINPYNYKKFLKHLKNILILLKEGEKTLSNPSQFKLSFHDEDLKTLQKIIRRL . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 58607 59020 . + . GCA_005502385.1_01508_mRNA GCA_005502385.1_01508 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MPIEIKNGGWIRIEDCGKNVKKLKKLDVIQRDLDTYHSLKDDMYQIFMYVKIFYFQQTPFDIRYISDIENYLLNFEINPHKSFMKINPYNYKKFLKHLKNILILLKEGEKTLSNPSQFKLSFHDEDLKTLQKIIRRL . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 58607 59020 . + 0 GCA_005502385.1_01508 GCA_005502385.1_01508_gene,GCA_005502385.1_01508_mRNA GCA_005502385.1_01508 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MPIEIKNGGWIRIEDCGKNVKKLKKLDVIQRDLDTYHSLKDDMYQIFMYVKIFYFQQTPFDIRYISDIENYLLNFEINPHKSFMKINPYNYKKFLKHLKNILILLKEGEKTLSNPSQFKLSFHDEDLKTLQKIIRRL cloud 137 hypothetical protein WP_240789611.1 UPI000E084C03 UniRef100_UPI000E084C03,UniRef50_A0A6A8FGZ2,UniRef90_UPI000E084C03 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 59164 60024 . + . GCA_005502385.1_01509_gene GCA_005502385.1_01509 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNNIRSKILLLNQYGFSDKLLKAIYKNSIDPVETIFNKTSENYNYFLNIYTRKDYNLSRNIDGLIEFNRMFKNSYLFKNNNDIKVFFKYQKKELQYLIPDSIFPLFMYSKGNINLLDFNRSRVAIIGTRTPSIESVKLCECYTKKYIDKGYIIVSGLAKGIDTVAHQTALKNKGYTISVIPTQFNKIYPKENHKLAKEIASKGLLLSNKGPFSNTYKSDFLDRNKYVANISDEILVIETNLKSGTMNTIRNASFAKKKIYYFNNLDMETQKVIEKYGGIKLEGEYK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 59164 60024 . + . GCA_005502385.1_01509_mRNA GCA_005502385.1_01509 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNNIRSKILLLNQYGFSDKLLKAIYKNSIDPVETIFNKTSENYNYFLNIYTRKDYNLSRNIDGLIEFNRMFKNSYLFKNNNDIKVFFKYQKKELQYLIPDSIFPLFMYSKGNINLLDFNRSRVAIIGTRTPSIESVKLCECYTKKYIDKGYIIVSGLAKGIDTVAHQTALKNKGYTISVIPTQFNKIYPKENHKLAKEIASKGLLLSNKGPFSNTYKSDFLDRNKYVANISDEILVIETNLKSGTMNTIRNASFAKKKIYYFNNLDMETQKVIEKYGGIKLEGEYK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 59164 60024 . + 0 GCA_005502385.1_01509 GCA_005502385.1_01509_gene,GCA_005502385.1_01509_mRNA GCA_005502385.1_01509 hypothetical protein """""" GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNNIRSKILLLNQYGFSDKLLKAIYKNSIDPVETIFNKTSENYNYFLNIYTRKDYNLSRNIDGLIEFNRMFKNSYLFKNNNDIKVFFKYQKKELQYLIPDSIFPLFMYSKGNINLLDFNRSRVAIIGTRTPSIESVKLCECYTKKYIDKGYIIVSGLAKGIDTVAHQTALKNKGYTISVIPTQFNKIYPKENHKLAKEIASKGLLLSNKGPFSNTYKSDFLDRNKYVANISDEILVIETNLKSGTMNTIRNASFAKKKIYYFNNLDMETQKVIEKYGGIKLEGEYK cloud 286 dprA DNA-processing protein DprA WP_077700193.1 UPI00098B5774 UniRef100_UPI0010F1F89B,UniRef50_UPI0028792937,UniRef90_UPI0028792937 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 60021 61181 . + . GCA_005502385.1_01510_gene GCA_005502385.1_01510 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKDRLIIISKKLVFDDKGDIKTGFESLYQECEIQNIGIIVITNDAPNLSVKLSNYSMCKAYSRNDVKTVLNQKRNEFGLVILGVVQQDAFLAFNYQIPLFKINDNNLSLDITIHDKVDKYGIELSNIDDLIQYINIISEDISPYLQYDFSEQYTLISLFNANTKGHQTEKNIEYKKEIQSILKYNYSTKIDKIKILKLFNFFILSEYFNNPIFQEVNYWGTFPSSEKSNDSTTIAYIKEVIRKVLNTSKSNKEILIRTKNSSKKHRSNQIIRNNNKCQSDFESLKINDYYREKLEGATVCIIDDYTTYGYSAEAAKNLLLQAGVKKLIVITLGKYGYIYNEVNYKLNGNLYKNDGYCYELISNRKHNFGPNNNNGYFERIKEIIDI . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 60021 61181 . + . GCA_005502385.1_01510_mRNA GCA_005502385.1_01510 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKDRLIIISKKLVFDDKGDIKTGFESLYQECEIQNIGIIVITNDAPNLSVKLSNYSMCKAYSRNDVKTVLNQKRNEFGLVILGVVQQDAFLAFNYQIPLFKINDNNLSLDITIHDKVDKYGIELSNIDDLIQYINIISEDISPYLQYDFSEQYTLISLFNANTKGHQTEKNIEYKKEIQSILKYNYSTKIDKIKILKLFNFFILSEYFNNPIFQEVNYWGTFPSSEKSNDSTTIAYIKEVIRKVLNTSKSNKEILIRTKNSSKKHRSNQIIRNNNKCQSDFESLKINDYYREKLEGATVCIIDDYTTYGYSAEAAKNLLLQAGVKKLIVITLGKYGYIYNEVNYKLNGNLYKNDGYCYELISNRKHNFGPNNNNGYFERIKEIIDI . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 60021 61181 . + 0 GCA_005502385.1_01510 GCA_005502385.1_01510_gene,GCA_005502385.1_01510_mRNA GCA_005502385.1_01510 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKDRLIIISKKLVFDDKGDIKTGFESLYQECEIQNIGIIVITNDAPNLSVKLSNYSMCKAYSRNDVKTVLNQKRNEFGLVILGVVQQDAFLAFNYQIPLFKINDNNLSLDITIHDKVDKYGIELSNIDDLIQYINIISEDISPYLQYDFSEQYTLISLFNANTKGHQTEKNIEYKKEIQSILKYNYSTKIDKIKILKLFNFFILSEYFNNPIFQEVNYWGTFPSSEKSNDSTTIAYIKEVIRKVLNTSKSNKEILIRTKNSSKKHRSNQIIRNNNKCQSDFESLKINDYYREKLEGATVCIIDDYTTYGYSAEAAKNLLLQAGVKKLIVITLGKYGYIYNEVNYKLNGNLYKNDGYCYELISNRKHNFGPNNNNGYFERIKEIIDI cloud 386 phosphoribosyltransferase WP_131566201.1 UPI00103DD922 UniRef100_UPI00103DD922,UniRef50_UPI000E011F4F,UniRef90_UPI000E011F4F . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 61440 61853 . - . GCA_005502385.1_01511_gene GCA_005502385.1_01511 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MYNSILLAADGSKNSIRAAQELLNFIGDYTIVTILTVVDIEESKTDVLHDHQGTNLTQKRESKLQSIKDLFTEHNVNYKIKIVHGTPTDKVVEVSNSGEYQAIILGTRGLNSFQKMVLGSVSHKVAKRSQIPVIIVK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 61440 61853 . - . GCA_005502385.1_01511_mRNA GCA_005502385.1_01511 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MYNSILLAADGSKNSIRAAQELLNFIGDYTIVTILTVVDIEESKTDVLHDHQGTNLTQKRESKLQSIKDLFTEHNVNYKIKIVHGTPTDKVVEVSNSGEYQAIILGTRGLNSFQKMVLGSVSHKVAKRSQIPVIIVK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 61440 61853 . - 0 GCA_005502385.1_01511 GCA_005502385.1_01511_gene,GCA_005502385.1_01511_mRNA GCA_005502385.1_01511 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MYNSILLAADGSKNSIRAAQELLNFIGDYTIVTILTVVDIEESKTDVLHDHQGTNLTQKRESKLQSIKDLFTEHNVNYKIKIVHGTPTDKVVEVSNSGEYQAIILGTRGLNSFQKMVLGSVSHKVAKRSQIPVIIVK shell 137 uspA Universal stress protein COG0589,T WP_000282781.1 UPI00000E4C30 UniRef100_D2J6L2,UniRef50_K9AYT9,UniRef90_D2J6L2 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 61866 63317 . - . GCA_005502385.1_01512_gene GCA_005502385.1_01512 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MVEKLKSEWFNQPRKNILAGIVVALALIPEAIAFSIIAGVDPMVGLYAAFIIATVTAIVGGRPAMISGATGAVALLVTPLVKEHGVEYLFAATILMGLIQLLLGILKVGRLMKFIPRPVMIGFVNALGIMIFMSQIEHIFNISIATYIYVIITLLIVYVIPRFYKAIPAPLIAIIVLTALYMYTGSDVRTVGDLGNIKQTLPHFLIPNIPFNLETLQIIFPYSLSMAIVGLVESLLTAKIVDDATDTHSSKNKESRGQGIANIITGFFGGMGGCAMIGQSVINVKSGANSRLSTFTAGIVLMFMIIVLGGVVVQIPMPILAGIMVMVSIGTVDWNSFKYIKKAPKTDAFVMVLTVIIVLITHNLAIGVVVGVVFSAIFFATKISKVEVIYKELGKQHRFSFKGQIFFVSIDSMMEKIDFNIEDSVIVLNFDHAHLWDDSAVNAIDTIVRKFEEKNNIVYVEKLNADSRKIISELSYLNETHLN . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 61866 63317 . - . GCA_005502385.1_01512_mRNA GCA_005502385.1_01512 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MVEKLKSEWFNQPRKNILAGIVVALALIPEAIAFSIIAGVDPMVGLYAAFIIATVTAIVGGRPAMISGATGAVALLVTPLVKEHGVEYLFAATILMGLIQLLLGILKVGRLMKFIPRPVMIGFVNALGIMIFMSQIEHIFNISIATYIYVIITLLIVYVIPRFYKAIPAPLIAIIVLTALYMYTGSDVRTVGDLGNIKQTLPHFLIPNIPFNLETLQIIFPYSLSMAIVGLVESLLTAKIVDDATDTHSSKNKESRGQGIANIITGFFGGMGGCAMIGQSVINVKSGANSRLSTFTAGIVLMFMIIVLGGVVVQIPMPILAGIMVMVSIGTVDWNSFKYIKKAPKTDAFVMVLTVIIVLITHNLAIGVVVGVVFSAIFFATKISKVEVIYKELGKQHRFSFKGQIFFVSIDSMMEKIDFNIEDSVIVLNFDHAHLWDDSAVNAIDTIVRKFEEKNNIVYVEKLNADSRKIISELSYLNETHLN . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 61866 63317 . - 0 GCA_005502385.1_01512 GCA_005502385.1_01512_gene,GCA_005502385.1_01512_mRNA GCA_005502385.1_01512 C4-dicarboxylic acid transporter DauA GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MVEKLKSEWFNQPRKNILAGIVVALALIPEAIAFSIIAGVDPMVGLYAAFIIATVTAIVGGRPAMISGATGAVALLVTPLVKEHGVEYLFAATILMGLIQLLLGILKVGRLMKFIPRPVMIGFVNALGIMIFMSQIEHIFNISIATYIYVIITLLIVYVIPRFYKAIPAPLIAIIVLTALYMYTGSDVRTVGDLGNIKQTLPHFLIPNIPFNLETLQIIFPYSLSMAIVGLVESLLTAKIVDDATDTHSSKNKESRGQGIANIITGFFGGMGGCAMIGQSVINVKSGANSRLSTFTAGIVLMFMIIVLGGVVVQIPMPILAGIMVMVSIGTVDWNSFKYIKKAPKTDAFVMVLTVIIVLITHNLAIGVVVGVVFSAIFFATKISKVEVIYKELGKQHRFSFKGQIFFVSIDSMMEKIDFNIEDSVIVLNFDHAHLWDDSAVNAIDTIVRKFEEKNNIVYVEKLNADSRKIISELSYLNETHLN shell 483 sUL1 Sulfate permease COG0659,P WP_002455808.1 UPI0001EF50C3 UniRef100_A0A7I0B036,UniRef50_P55189,UniRef90_A0A0H2VJ01 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 63431 63973 . + . GCA_005502385.1_01513_gene GCA_005502385.1_01513 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKYGYIRPVTINDTVTEQAKKIEIYTKNILKETHANNKKRNELNTLLNSKLVFGDTLYITDLCIIADSTKHLVDILDLLSAKGISLYIINLNKNLIADTNENFIKTLHEITDFQSDIVKFRTRMGLENYTREGKRLGRPKRDDKNLRDAIEMYMSKKYTLDEIKEKTNISRATLYRHLDK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 63431 63973 . + . GCA_005502385.1_01513_mRNA GCA_005502385.1_01513 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKYGYIRPVTINDTVTEQAKKIEIYTKNILKETHANNKKRNELNTLLNSKLVFGDTLYITDLCIIADSTKHLVDILDLLSAKGISLYIINLNKNLIADTNENFIKTLHEITDFQSDIVKFRTRMGLENYTREGKRLGRPKRDDKNLRDAIEMYMSKKYTLDEIKEKTNISRATLYRHLDK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 63431 63973 . + 0 GCA_005502385.1_01513 GCA_005502385.1_01513_gene,GCA_005502385.1_01513_mRNA GCA_005502385.1_01513 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKYGYIRPVTINDTVTEQAKKIEIYTKNILKETHANNKKRNELNTLLNSKLVFGDTLYITDLCIIADSTKHLVDILDLLSAKGISLYIINLNKNLIADTNENFIKTLHEITDFQSDIVKFRTRMGLENYTREGKRLGRPKRDDKNLRDAIEMYMSKKYTLDEIKEKTNISRATLYRHLDK shell 180 spoIVCA Resolvase COG1961,L WP_000873698.1 UPI0001C00B68 UniRef100_A0A2K0AYK0,UniRef50_A0A078M9W2,UniRef90_A0A0H2VL41 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 64440 65018 . + . GCA_005502385.1_01514_gene GCA_005502385.1_01514 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKIGYARVSTGLQNLNLQEDRLNQYGCEKIFSDHISGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNELNNRGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRIAARARGRYGGRPEKLNKQDLKLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLNKLNNQENKDK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 64440 65018 . + . GCA_005502385.1_01514_mRNA GCA_005502385.1_01514 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKIGYARVSTGLQNLNLQEDRLNQYGCEKIFSDHISGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNELNNRGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRIAARARGRYGGRPEKLNKQDLKLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLNKLNNQENKDK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 64440 65018 . + 0 GCA_005502385.1_01514 GCA_005502385.1_01514_gene,GCA_005502385.1_01514_mRNA GCA_005502385.1_01514 DNA-invertase hin GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKIGYARVSTGLQNLNLQEDRLNQYGCEKIFSDHISGSKSKRPGLDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNELNNRGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEFERNLILERSSAGRIAARARGRYGGRPEKLNKQDLKLLKTLYDNGTPIKTIAEQWKVSRTTIYRYLNKLNNQENKDK shell 192 resR Transposon Tn552 DNA-invertase BinR GO:0000150,GO:0003677,GO:0015074 COG1961,L WP_002455810.1 UPI0001EF50C4 UniRef100_A0A2T4KHB9,UniRef50_P19241,UniRef90_P19241 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 65145 65753 . + . GCA_005502385.1_01515_gene GCA_005502385.1_01515 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIIGYARVSSVDQNLERQLDNLKTFGVEKIFTEKQSGKSVENRPVFQEALNFVRMGDRFVVESIDRLGRNYDEVINTVNYLKDKEVQLMITSLPMMNEVIGNPLLDKFMKDLIIQILAMVSEQERNESKRRQAQGIKVAKEKGVYKGRPLLYSPNAKDPQKRIIYHRVVEMLKEGQAISKIAKEVNITKQTVYRIKHDNDLV . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 65145 65753 . + . GCA_005502385.1_01515_mRNA GCA_005502385.1_01515 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIIGYARVSSVDQNLERQLDNLKTFGVEKIFTEKQSGKSVENRPVFQEALNFVRMGDRFVVESIDRLGRNYDEVINTVNYLKDKEVQLMITSLPMMNEVIGNPLLDKFMKDLIIQILAMVSEQERNESKRRQAQGIKVAKEKGVYKGRPLLYSPNAKDPQKRIIYHRVVEMLKEGQAISKIAKEVNITKQTVYRIKHDNDLV . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 65145 65753 . + 0 GCA_005502385.1_01515 GCA_005502385.1_01515_gene,GCA_005502385.1_01515_mRNA GCA_005502385.1_01515 Putative transposon Tn552 DNA-invertase bin3 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIIGYARVSSVDQNLERQLDNLKTFGVEKIFTEKQSGKSVENRPVFQEALNFVRMGDRFVVESIDRLGRNYDEVINTVNYLKDKEVQLMITSLPMMNEVIGNPLLDKFMKDLIIQILAMVSEQERNESKRRQAQGIKVAKEKGVYKGRPLLYSPNAKDPQKRIIYHRVVEMLKEGQAISKIAKEVNITKQTVYRIKHDNDLV persistent 202 spoIVCA Recombinase COG1961,L WP_049415043.1 UPI00066A1ECE UniRef100_UPI00066A1ECE,UniRef50_P20384,UniRef90_D2J728 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 65918 66520 . - . GCA_005502385.1_01516_gene GCA_005502385.1_01516 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKFFILGLLIFSLVLTGCNNLESKEDSETDKIVQKPIPNKIFDRKIINSRISENELKKSIKIYLDKNEELSEASEYYEDKVDSEEPLNKSEINKLKKINNLIKHNDENFREYIQNNTLPKDYNKETLRISEYISNSNKFNQNLDTKIDQAINKSTDQKKVSTKNIDEIKDDSKKVNGKEQAKIEKFLKDKNIKTKAFKK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 65918 66520 . - . GCA_005502385.1_01516_mRNA GCA_005502385.1_01516 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKFFILGLLIFSLVLTGCNNLESKEDSETDKIVQKPIPNKIFDRKIINSRISENELKKSIKIYLDKNEELSEASEYYEDKVDSEEPLNKSEINKLKKINNLIKHNDENFREYIQNNTLPKDYNKETLRISEYISNSNKFNQNLDTKIDQAINKSTDQKKVSTKNIDEIKDDSKKVNGKEQAKIEKFLKDKNIKTKAFKK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 65918 66520 . - 0 GCA_005502385.1_01516 GCA_005502385.1_01516_gene,GCA_005502385.1_01516_mRNA GCA_005502385.1_01516 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKFFILGLLIFSLVLTGCNNLESKEDSETDKIVQKPIPNKIFDRKIINSRISENELKKSIKIYLDKNEELSEASEYYEDKVDSEEPLNKSEINKLKKINNLIKHNDENFREYIQNNTLPKDYNKETLRISEYISNSNKFNQNLDTKIDQAINKSTDQKKVSTKNIDEIKDDSKKVNGKEQAKIEKFLKDKNIKTKAFKK shell 200 NDxxF motif lipoprotein WP_137689602.1 UPI0010F58CB2 UniRef100_UPI0010F58CB2,UniRef50_A0A2W5QZE7,UniRef90_A0A8I1BDQ6 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 66520 67086 . - . GCA_005502385.1_01517_gene GCA_005502385.1_01517 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNKEQYLEILKKRMKNVDKDEKKDILNEYESHFISGYKDNKDDTEIIKKLGDPVKISKEINAMTAINKVEKEKNIKNIFIAAFSIMSFSIFNFISITFSFFVLLLLLPLILAYVIAVPIMIVSLIILLVIGVINGFDTISMHDIFEVIKGVILGIILGFMGYFVAKYFLNFVVLYLKWNMAILKKEKL . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 66520 67086 . - . GCA_005502385.1_01517_mRNA GCA_005502385.1_01517 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNKEQYLEILKKRMKNVDKDEKKDILNEYESHFISGYKDNKDDTEIIKKLGDPVKISKEINAMTAINKVEKEKNIKNIFIAAFSIMSFSIFNFISITFSFFVLLLLLPLILAYVIAVPIMIVSLIILLVIGVINGFDTISMHDIFEVIKGVILGIILGFMGYFVAKYFLNFVVLYLKWNMAILKKEKL . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 66520 67086 . - 0 GCA_005502385.1_01517 GCA_005502385.1_01517_gene,GCA_005502385.1_01517_mRNA GCA_005502385.1_01517 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNKEQYLEILKKRMKNVDKDEKKDILNEYESHFISGYKDNKDDTEIIKKLGDPVKISKEINAMTAINKVEKEKNIKNIFIAAFSIMSFSIFNFISITFSFFVLLLLLPLILAYVIAVPIMIVSLIILLVIGVINGFDTISMHDIFEVIKGVILGIILGFMGYFVAKYFLNFVVLYLKWNMAILKKEKL shell 188 DUF1700 domain-containing protein UniRef50_A0A0H2VJ84 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 67949 68362 . + . GCA_005502385.1_01518_gene GCA_005502385.1_01518 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 METKIGHQIQKLRKSENMSQEKLAEKLGVSRHSISNWEREVSNPDLKTILEITKLFNVSLNQLIKGVEIMQVNKYVYSALAFFLGGFGAHKFYVKKNKNALLYLLFCWTGIPGVIGMVEGVLTLMRPSDSENNIEIN . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 67949 68362 . + . GCA_005502385.1_01518_mRNA GCA_005502385.1_01518 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 METKIGHQIQKLRKSENMSQEKLAEKLGVSRHSISNWEREVSNPDLKTILEITKLFNVSLNQLIKGVEIMQVNKYVYSALAFFLGGFGAHKFYVKKNKNALLYLLFCWTGIPGVIGMVEGVLTLMRPSDSENNIEIN . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 67949 68362 . + 0 GCA_005502385.1_01518 GCA_005502385.1_01518_gene,GCA_005502385.1_01518_mRNA GCA_005502385.1_01518 hypothetical protein """""" GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 METKIGHQIQKLRKSENMSQEKLAEKLGVSRHSISNWEREVSNPDLKTILEITKLFNVSLNQLIKGVEIMQVNKYVYSALAFFLGGFGAHKFYVKKNKNALLYLLFCWTGIPGVIGMVEGVLTLMRPSDSENNIEIN shell 137 NINE protein WP_080982419.1 UPI0009BABC7B UniRef100_UPI0011A0589E,UniRef50_Q4L9W0,UniRef90_A0A6N0I1E8 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 68439 68654 . + . GCA_005502385.1_01519_gene GCA_005502385.1_01519 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNTFVFGVITKRLEEIGFNVHKVFKMPEKQALFEDLYHYVRYVKPCKAELTMVALDSDELIHYGSVAKLDL . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 68439 68654 . + . GCA_005502385.1_01519_mRNA GCA_005502385.1_01519 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNTFVFGVITKRLEEIGFNVHKVFKMPEKQALFEDLYHYVRYVKPCKAELTMVALDSDELIHYGSVAKLDL . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 68439 68654 . + 0 GCA_005502385.1_01519 GCA_005502385.1_01519_gene,GCA_005502385.1_01519_mRNA GCA_005502385.1_01519 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNTFVFGVITKRLEEIGFNVHKVFKMPEKQALFEDLYHYVRYVKPCKAELTMVALDSDELIHYGSVAKLDL shell 71 hypothetical protein WP_002449614.1 UPI00019FCD7E UniRef100_A0A380IVH6,UniRef50_A0A380IVH6,UniRef90_A0A380IVH6 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 68684 69358 . + . GCA_005502385.1_01520_gene GCA_005502385.1_01520 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNYFRYKQFDKDVITVAVGYYLRYALSYRDISEILRERGFDVHHSTIYRWVQEYAPIFYQLWKRKHKKTYYKWRIDETYIKIKGQWCYLYRAIDADGHTLDIWLRKKRDHQSAYAFIKRLIKQFGKPQMIITDQAPSTKVAMAKIIKVFKLKPNCHCTSKYLNNLIEQDHRHIKVRKTRYQSVNTAKNTLKGIECIYGLYKKNRRSLQIYGFSPCHEISYMLAG . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 68684 69358 . + . GCA_005502385.1_01520_mRNA GCA_005502385.1_01520 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNYFRYKQFDKDVITVAVGYYLRYALSYRDISEILRERGFDVHHSTIYRWVQEYAPIFYQLWKRKHKKTYYKWRIDETYIKIKGQWCYLYRAIDADGHTLDIWLRKKRDHQSAYAFIKRLIKQFGKPQMIITDQAPSTKVAMAKIIKVFKLKPNCHCTSKYLNNLIEQDHRHIKVRKTRYQSVNTAKNTLKGIECIYGLYKKNRRSLQIYGFSPCHEISYMLAG . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 68684 69358 . + 0 GCA_005502385.1_01520 GCA_005502385.1_01520_gene,GCA_005502385.1_01520_mRNA GCA_005502385.1_01520 IS6 family transposase IS257-3 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNYFRYKQFDKDVITVAVGYYLRYALSYRDISEILRERGFDVHHSTIYRWVQEYAPIFYQLWKRKHKKTYYKWRIDETYIKIKGQWCYLYRAIDADGHTLDIWLRKKRDHQSAYAFIKRLIKQFGKPQMIITDQAPSTKVAMAKIIKVFKLKPNCHCTSKYLNNLIEQDHRHIKVRKTRYQSVNTAKNTLKGIECIYGLYKKNRRSLQIYGFSPCHEISYMLAG shell 224 tnp IS6 family transposase GO:0004803 WP_002449609.1 UPI00019FCD7D UniRef100_A0A380IV81,UniRef50_P0C1L0,UniRef90_A0A380IV81 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 69523 69855 . - . GCA_005502385.1_01521_gene GCA_005502385.1_01521 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MYYKGKEFFTSKDLALCVIGGKWKIPIIFHLLQDKVLRLSELQKKLPHVNQRMLIRQLRELEEDQIIERHIYSVVPPKVEYKLTSIGYKLDKVVYAICEWGDLFKDEIIH . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 69523 69855 . - . GCA_005502385.1_01521_mRNA GCA_005502385.1_01521 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MYYKGKEFFTSKDLALCVIGGKWKIPIIFHLLQDKVLRLSELQKKLPHVNQRMLIRQLRELEEDQIIERHIYSVVPPKVEYKLTSIGYKLDKVVYAICEWGDLFKDEIIH . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 69523 69855 . - 0 GCA_005502385.1_01521 GCA_005502385.1_01521_gene,GCA_005502385.1_01521_mRNA GCA_005502385.1_01521 HTH-type transcriptional activator HxlR GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MYYKGKEFFTSKDLALCVIGGKWKIPIIFHLLQDKVLRLSELQKKLPHVNQRMLIRQLRELEEDQIIERHIYSVVPPKVEYKLTSIGYKLDKVVYAICEWGDLFKDEIIH shell 110 hxlR Helix-turn-helix HxlR type WP_002505086.1 UPI00026C033D UniRef100_A0A380IVZ4,UniRef50_A0A0B4RBW5,UniRef90_A0A380IVZ4 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 69945 70496 . - . GCA_005502385.1_01522_gene GCA_005502385.1_01522 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MMATFNHYQLILDELKGTLSHVKDEEFDGFASEVTEASRIFVAGKGRSGFVANSFAMRLNQLGKQAFVIGESTTPSIQKGDLFIVISGSGSTEHLRLLADKAKSVEAEVVLLTTKLDSAIGEIADTVVELPAGTKHDATGSDQPLGSLFEQSSQIFLDSVVIGLMTQLDVDETTMQNNHANLE . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 69945 70496 . - . GCA_005502385.1_01522_mRNA GCA_005502385.1_01522 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MMATFNHYQLILDELKGTLSHVKDEEFDGFASEVTEASRIFVAGKGRSGFVANSFAMRLNQLGKQAFVIGESTTPSIQKGDLFIVISGSGSTEHLRLLADKAKSVEAEVVLLTTKLDSAIGEIADTVVELPAGTKHDATGSDQPLGSLFEQSSQIFLDSVVIGLMTQLDVDETTMQNNHANLE . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 69945 70496 . - 0 GCA_005502385.1_01522 GCA_005502385.1_01522_gene,GCA_005502385.1_01522_mRNA GCA_005502385.1_01522 3-hexulose-6-phosphate isomerase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MMATFNHYQLILDELKGTLSHVKDEEFDGFASEVTEASRIFVAGKGRSGFVANSFAMRLNQLGKQAFVIGESTTPSIQKGDLFIVISGSGSTEHLRLLADKAKSVEAEVVLLTTKLDSAIGEIADTVVELPAGTKHDATGSDQPLGSLFEQSSQIFLDSVVIGLMTQLDVDETTMQNNHANLE shell 183 Sugar isomerase (SIS) 5.3.1.27 WP_002449610.1 UPI00019FCD7C UniRef100_A0A380IVA2,UniRef50_A0A380G9B8,UniRef90_A0A380IVA2 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 70496 71128 . - . GCA_005502385.1_01523_gene GCA_005502385.1_01523 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MELQLAIDLLNKEEAAELAKKVEEYVDIVEIGTPIVINEGLPAVQHLNENISNAKVLADLKIMDAADYEVSQAVKFGADVVTILGVAEDASIKAAVEEAHKNDKQLLVDMIAVQDLEKRAKELDEMGADYIAVHTGYDLQAEGQSPLDSLRKVKSVIKNSKVAVAGGIKPDTIKEIVAEEPDLVIVGGGIANADDPVEAAKQCRDAIEGK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 70496 71128 . - . GCA_005502385.1_01523_mRNA GCA_005502385.1_01523 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MELQLAIDLLNKEEAAELAKKVEEYVDIVEIGTPIVINEGLPAVQHLNENISNAKVLADLKIMDAADYEVSQAVKFGADVVTILGVAEDASIKAAVEEAHKNDKQLLVDMIAVQDLEKRAKELDEMGADYIAVHTGYDLQAEGQSPLDSLRKVKSVIKNSKVAVAGGIKPDTIKEIVAEEPDLVIVGGGIANADDPVEAAKQCRDAIEGK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 70496 71128 . - 0 GCA_005502385.1_01523 GCA_005502385.1_01523_gene,GCA_005502385.1_01523_mRNA GCA_005502385.1_01523 3-hexulose-6-phosphate synthase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MELQLAIDLLNKEEAAELAKKVEEYVDIVEIGTPIVINEGLPAVQHLNENISNAKVLADLKIMDAADYEVSQAVKFGADVVTILGVAEDASIKAAVEEAHKNDKQLLVDMIAVQDLEKRAKELDEMGADYIAVHTGYDLQAEGQSPLDSLRKVKSVIKNSKVAVAGGIKPDTIKEIVAEEPDLVIVGGGIANADDPVEAAKQCRDAIEGK persistent 210 ulaD 3-hexulose-6-phosphate synthase 4.1.2.43 GO:0004590,GO:0006207,GO:0006730,GO:0019647,GO:0019854,GO:0033982,GO:0043801 COG0269,G WP_002449613.1 UPI00019FCCA7 UniRef100_A0A380IXL8,UniRef50_P42405,UniRef90_Q2G0K7 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 71329 72660 . + . GCA_005502385.1_01524_gene GCA_005502385.1_01524 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTHIQLDYGKTLEFFGEHELEQQKDIVKTLHKTIHEGTGAGNNFLGWVDLPIDYDKEEFSRIVEASKRIKVNSDVLVVIGIGGSYLGARAAIEMLTSSFRTNNDYPEIVFVGNHLSSNYTKELVDYLADKDFSVNVISKSGTTTEPAVAFRLFKQLVENKYGKEEAKKRIFATTDKQKGALKQLATNEGYETFVVPDDVGGRYSVLTAVGLLPIAAAGINIEAMMIGAAKARKELSSDKLEENIAYQYATIRNLLYSKGYTTEMLINYEPSMQYFNEWWKQLFGESEGKDFKGIYPSSANYTTDLHSLGQYVQEGRRFLFETVVKVNHPKHDLTIEEDSDDLDGLNYLAGKTIDEVNTKAFEGTLLAHTDGGVPNIVVNIPQLDEETFGYVVYFFELACAMSGYQLGVNPFNQPGVEAYKQNMFALLGKPGFEDMKKDLEARL . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 71329 72660 . + . GCA_005502385.1_01524_mRNA GCA_005502385.1_01524 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTHIQLDYGKTLEFFGEHELEQQKDIVKTLHKTIHEGTGAGNNFLGWVDLPIDYDKEEFSRIVEASKRIKVNSDVLVVIGIGGSYLGARAAIEMLTSSFRTNNDYPEIVFVGNHLSSNYTKELVDYLADKDFSVNVISKSGTTTEPAVAFRLFKQLVENKYGKEEAKKRIFATTDKQKGALKQLATNEGYETFVVPDDVGGRYSVLTAVGLLPIAAAGINIEAMMIGAAKARKELSSDKLEENIAYQYATIRNLLYSKGYTTEMLINYEPSMQYFNEWWKQLFGESEGKDFKGIYPSSANYTTDLHSLGQYVQEGRRFLFETVVKVNHPKHDLTIEEDSDDLDGLNYLAGKTIDEVNTKAFEGTLLAHTDGGVPNIVVNIPQLDEETFGYVVYFFELACAMSGYQLGVNPFNQPGVEAYKQNMFALLGKPGFEDMKKDLEARL . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 71329 72660 . + 0 GCA_005502385.1_01524 GCA_005502385.1_01524_gene,GCA_005502385.1_01524_mRNA GCA_005502385.1_01524 Glucose-6-phosphate isomerase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTHIQLDYGKTLEFFGEHELEQQKDIVKTLHKTIHEGTGAGNNFLGWVDLPIDYDKEEFSRIVEASKRIKVNSDVLVVIGIGGSYLGARAAIEMLTSSFRTNNDYPEIVFVGNHLSSNYTKELVDYLADKDFSVNVISKSGTTTEPAVAFRLFKQLVENKYGKEEAKKRIFATTDKQKGALKQLATNEGYETFVVPDDVGGRYSVLTAVGLLPIAAAGINIEAMMIGAAKARKELSSDKLEENIAYQYATIRNLLYSKGYTTEMLINYEPSMQYFNEWWKQLFGESEGKDFKGIYPSSANYTTDLHSLGQYVQEGRRFLFETVVKVNHPKHDLTIEEDSDDLDGLNYLAGKTIDEVNTKAFEGTLLAHTDGGVPNIVVNIPQLDEETFGYVVYFFELACAMSGYQLGVNPFNQPGVEAYKQNMFALLGKPGFEDMKKDLEARL persistent 443 pgi glucose-6-phosphate isomerase 5.3.1.9 GO:0004347,GO:0005829,GO:0006094,GO:0006096,GO:0048029,GO:0051156,GO:0097367 COG0166,G WP_002449611.1 UPI00019FCCA6 UniRef100_A0A380IX08,UniRef50_P13376,UniRef90_Q2FZU0 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 72692 74098 . + . GCA_005502385.1_01525_gene GCA_005502385.1_01525 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSSNIGILGLGVMGKNLAWNIEDKKYSVSIHSRDNNEINDTIQKSHYQKIYPAYNLKEFVDSLEKPRKILLMIKAGSPTDNMINALLPLLDDEDILIDGGNTNYQDTIRRNKTLAESGVNFIGMGVSGGEVGALTGPSLMPGGQEAAYNKVSDILDAIAAKAQDGASCVTYIGPNGAGHYVKMVHNGIEYADMQLIAESYTMMKDLLGMSHTEISQTFKDWNAGELESYLIEITGDIFTKLDENNEPLVEKILDTAGQKGTGKWTSINALELGIPLTIITESVFARFISSIKEERVNASKSLNGPQASFDGNKEEFLEKIRKALYMSKICSYAQGFAQMRKSSEDHEWNLKLGELAMIWREGCIIRAQFLQKIKDAYDNNPELENLLLDPYFKNIVTDYQDALRDVVATGVKNGVPTPGFSASVNYYDSYRSEDLSANLIQAQRDYFGAHTYERKDREGVFHTQWDEE . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 72692 74098 . + . GCA_005502385.1_01525_mRNA GCA_005502385.1_01525 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSSNIGILGLGVMGKNLAWNIEDKKYSVSIHSRDNNEINDTIQKSHYQKIYPAYNLKEFVDSLEKPRKILLMIKAGSPTDNMINALLPLLDDEDILIDGGNTNYQDTIRRNKTLAESGVNFIGMGVSGGEVGALTGPSLMPGGQEAAYNKVSDILDAIAAKAQDGASCVTYIGPNGAGHYVKMVHNGIEYADMQLIAESYTMMKDLLGMSHTEISQTFKDWNAGELESYLIEITGDIFTKLDENNEPLVEKILDTAGQKGTGKWTSINALELGIPLTIITESVFARFISSIKEERVNASKSLNGPQASFDGNKEEFLEKIRKALYMSKICSYAQGFAQMRKSSEDHEWNLKLGELAMIWREGCIIRAQFLQKIKDAYDNNPELENLLLDPYFKNIVTDYQDALRDVVATGVKNGVPTPGFSASVNYYDSYRSEDLSANLIQAQRDYFGAHTYERKDREGVFHTQWDEE . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 72692 74098 . + 0 GCA_005502385.1_01525 GCA_005502385.1_01525_gene,GCA_005502385.1_01525_mRNA GCA_005502385.1_01525 6-phosphogluconate dehydrogenase%2C decarboxylating GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSSNIGILGLGVMGKNLAWNIEDKKYSVSIHSRDNNEINDTIQKSHYQKIYPAYNLKEFVDSLEKPRKILLMIKAGSPTDNMINALLPLLDDEDILIDGGNTNYQDTIRRNKTLAESGVNFIGMGVSGGEVGALTGPSLMPGGQEAAYNKVSDILDAIAAKAQDGASCVTYIGPNGAGHYVKMVHNGIEYADMQLIAESYTMMKDLLGMSHTEISQTFKDWNAGELESYLIEITGDIFTKLDENNEPLVEKILDTAGQKGTGKWTSINALELGIPLTIITESVFARFISSIKEERVNASKSLNGPQASFDGNKEEFLEKIRKALYMSKICSYAQGFAQMRKSSEDHEWNLKLGELAMIWREGCIIRAQFLQKIKDAYDNNPELENLLLDPYFKNIVTDYQDALRDVVATGVKNGVPTPGFSASVNYYDSYRSEDLSANLIQAQRDYFGAHTYERKDREGVFHTQWDEE persistent 468 gndA NADP-dependent phosphogluconate dehydrogenase 1.1.1.343,1.1.1.44 GO:0004616,GO:0006098,GO:0050661 WP_002449612.1 UPI00019FCCA5 UniRef100_A0A380IV50,UniRef50_P00350,UniRef90_D2J6C7 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 74162 75622 . + . GCA_005502385.1_01526_gene GCA_005502385.1_01526 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDKNLSSLITIFGGTGDLSYRKLLPSIFNLYKKGHFKKLVIISTGLEDISDEEYRSKVKQILLSQENFEMVNLFLDNIFYFQQNVEDKTSWNKLKELSNDIDKKYCLDGNRLFYLAMNPQFFKIITQSISQSGLSDTNGFSRLIIEKPFGKDLKSAEDLNKHIRQYFKEEEIFRIDHYLGKEMVQNIESLRFGNTIFEPLWNNKYISNVQITLSETLGIEDRGQYYDSTGALKDMVQNHALQILTLIAMEKPESRNSKDIRLKKIELLNNIKFLKGADVHKYFVRGQYINGIINETPIMSYHEEKGVNSDSTTETFVAGKLLINNDRWKGTPFYIRTGKRLNKKAIEVVIEFKKLNSKLIYENDNEDVDCNLMVINIEPNAQISLYIYENKSTRNNRNHNIQIYNLIDKKQVVDAYESLICDALIGNQTNFVHWEELKHSWEFIDYISTEWKKSNVTIPQYKPGSFGPKESDQLLKQDNFEWWNNL . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 74162 75622 . + . GCA_005502385.1_01526_mRNA GCA_005502385.1_01526 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDKNLSSLITIFGGTGDLSYRKLLPSIFNLYKKGHFKKLVIISTGLEDISDEEYRSKVKQILLSQENFEMVNLFLDNIFYFQQNVEDKTSWNKLKELSNDIDKKYCLDGNRLFYLAMNPQFFKIITQSISQSGLSDTNGFSRLIIEKPFGKDLKSAEDLNKHIRQYFKEEEIFRIDHYLGKEMVQNIESLRFGNTIFEPLWNNKYISNVQITLSETLGIEDRGQYYDSTGALKDMVQNHALQILTLIAMEKPESRNSKDIRLKKIELLNNIKFLKGADVHKYFVRGQYINGIINETPIMSYHEEKGVNSDSTTETFVAGKLLINNDRWKGTPFYIRTGKRLNKKAIEVVIEFKKLNSKLIYENDNEDVDCNLMVINIEPNAQISLYIYENKSTRNNRNHNIQIYNLIDKKQVVDAYESLICDALIGNQTNFVHWEELKHSWEFIDYISTEWKKSNVTIPQYKPGSFGPKESDQLLKQDNFEWWNNL . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 74162 75622 . + 0 GCA_005502385.1_01526 GCA_005502385.1_01526_gene,GCA_005502385.1_01526_mRNA GCA_005502385.1_01526 Glucose-6-phosphate 1-dehydrogenase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDKNLSSLITIFGGTGDLSYRKLLPSIFNLYKKGHFKKLVIISTGLEDISDEEYRSKVKQILLSQENFEMVNLFLDNIFYFQQNVEDKTSWNKLKELSNDIDKKYCLDGNRLFYLAMNPQFFKIITQSISQSGLSDTNGFSRLIIEKPFGKDLKSAEDLNKHIRQYFKEEEIFRIDHYLGKEMVQNIESLRFGNTIFEPLWNNKYISNVQITLSETLGIEDRGQYYDSTGALKDMVQNHALQILTLIAMEKPESRNSKDIRLKKIELLNNIKFLKGADVHKYFVRGQYINGIINETPIMSYHEEKGVNSDSTTETFVAGKLLINNDRWKGTPFYIRTGKRLNKKAIEVVIEFKKLNSKLIYENDNEDVDCNLMVINIEPNAQISLYIYENKSTRNNRNHNIQIYNLIDKKQVVDAYESLICDALIGNQTNFVHWEELKHSWEFIDYISTEWKKSNVTIPQYKPGSFGPKESDQLLKQDNFEWWNNL shell 486 zwf glucose-6-phosphate dehydrogenase 1.1.1.363,1.1.1.49 GO:0004345,GO:0006006,GO:0006098,GO:0016614,GO:0050661 WP_002449615.1 UPI00019FCCA4 UniRef100_A0A380IVV4,UniRef50_Q5HP46,UniRef90_A0A380IVV4 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 75661 75774 . + . GCA_005502385.1_01527_gene GCA_005502385.1_01527 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNILIVYAHPGPQSFNSKLKDIAQTVLKENGNNCRCI . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 75661 75774 . + . GCA_005502385.1_01527_mRNA GCA_005502385.1_01527 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNILIVYAHPGPQSFNSKLKDIAQTVLKENGNNCRCI . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 75661 75774 . + 0 GCA_005502385.1_01527 GCA_005502385.1_01527_gene,GCA_005502385.1_01527_mRNA GCA_005502385.1_01527 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNILIVYAHPGPQSFNSKLKDIAQTVLKENGNNCRCI shell 37 hypothetical protein WP_017175388.1 UPI0002DCBB8E UniRef100_A0A380IW99,UniRef50_A0A380IW99,UniRef90_A0A380IW99 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 75749 76270 . + . GCA_005502385.1_01528_gene GCA_005502385.1_01528 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MVIIVVVSDLYKMNFNPVAQKSDFKYLKNNNFFKYPIEQEHSYKNNILSKEIKSELSKLLWADIIIFQFPLWWSSVPAILKGWFDKVLIYGGIYGGAYGKFKNARLSNKKAIISTTTGSSGDIHKQVLFHISHGIVEYTGMQCLDTLIAYEIDKDQNSRDEYIEFFKNKIKYI . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 75749 76270 . + . GCA_005502385.1_01528_mRNA GCA_005502385.1_01528 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MVIIVVVSDLYKMNFNPVAQKSDFKYLKNNNFFKYPIEQEHSYKNNILSKEIKSELSKLLWADIIIFQFPLWWSSVPAILKGWFDKVLIYGGIYGGAYGKFKNARLSNKKAIISTTTGSSGDIHKQVLFHISHGIVEYTGMQCLDTLIAYEIDKDQNSRDEYIEFFKNKIKYI . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 75749 76270 . + 0 GCA_005502385.1_01528 GCA_005502385.1_01528_gene,GCA_005502385.1_01528_mRNA GCA_005502385.1_01528 Glutathione-regulated potassium-efflux system ancillary protein KefF GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MVIIVVVSDLYKMNFNPVAQKSDFKYLKNNNFFKYPIEQEHSYKNNILSKEIKSELSKLLWADIIIFQFPLWWSSVPAILKGWFDKVLIYGGIYGGAYGKFKNARLSNKKAIISTTTGSSGDIHKQVLFHISHGIVEYTGMQCLDTLIAYEIDKDQNSRDEYIEFFKNKIKYI shell 173 NAD(P)H quinone oxidoreductase WP_015387321.1 UPI0002AD7725 UniRef100_A0A380IV70,UniRef50_A0A380IV70,UniRef90_A0A380IV70 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 76458 76658 . + . GCA_005502385.1_01529_gene GCA_005502385.1_01529 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIIEQLKQELELNTVNSIEVYFHSGDSVIARKIDYSQSSEKIIKVLNPVPMYINLENVTYIQLREM . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 76458 76658 . + . GCA_005502385.1_01529_mRNA GCA_005502385.1_01529 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIIEQLKQELELNTVNSIEVYFHSGDSVIARKIDYSQSSEKIIKVLNPVPMYINLENVTYIQLREM . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 76458 76658 . + 0 GCA_005502385.1_01529 GCA_005502385.1_01529_gene,GCA_005502385.1_01529_mRNA GCA_005502385.1_01529 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIIEQLKQELELNTVNSIEVYFHSGDSVIARKIDYSQSSEKIIKVLNPVPMYINLENVTYIQLREM shell 66 hypothetical protein WP_015387322.1 UPI0002AD7646 UniRef100_A0A380IVI6,UniRef50_A0A380IVI6,UniRef90_A0A380IVI6 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 76733 77407 . - . GCA_005502385.1_01530_gene GCA_005502385.1_01530 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNYFRYKQFNKDVITVAVGYYLRYALSYRDISEILRERGVNVHHSTVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHPLDIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIMLAS . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 76733 77407 . - . GCA_005502385.1_01530_mRNA GCA_005502385.1_01530 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNYFRYKQFNKDVITVAVGYYLRYALSYRDISEILRERGVNVHHSTVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHPLDIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIMLAS . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 76733 77407 . - 0 GCA_005502385.1_01530 GCA_005502385.1_01530_gene,GCA_005502385.1_01530_mRNA GCA_005502385.1_01530 IS6 family transposase IS431R GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNYFRYKQFNKDVITVAVGYYLRYALSYRDISEILRERGVNVHHSTVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHPLDIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIMLAS shell 224 tnp IS6 family IS431mec transposase GO:0003677,GO:0004803,GO:0006310,GO:0015074,GO:0032196 COG3316,X WP_057518767.1 UPI0005C43535 UniRef100_A0A6N0I1L1,UniRef50_P0C1L0,UniRef90_P0C1L0 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 77565 78269 . - . GCA_005502385.1_01531_gene GCA_005502385.1_01531 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKIILPILIVSLSVILVSCNNNDSEHHNDNNSSDTNTSENKDNEASNEIDEKTNTSDSADNSESSNKQNKEKNDNKKQEKNNDSNKKQQSTDKNKSYLNNFNSKEIEYARVWYQLISTRNDLKGIKNVYVTEIPKGSKVNPQAKNSAIYKEKVVKLEAPMRAGGSVTYSSNGDGTINVYNNIPYKWENSQNSDYSQMNKITKKAIEENIETVYIKPYDNKTVAKLASKIRYNK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 77565 78269 . - . GCA_005502385.1_01531_mRNA GCA_005502385.1_01531 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKIILPILIVSLSVILVSCNNNDSEHHNDNNSSDTNTSENKDNEASNEIDEKTNTSDSADNSESSNKQNKEKNDNKKQEKNNDSNKKQQSTDKNKSYLNNFNSKEIEYARVWYQLISTRNDLKGIKNVYVTEIPKGSKVNPQAKNSAIYKEKVVKLEAPMRAGGSVTYSSNGDGTINVYNNIPYKWENSQNSDYSQMNKITKKAIEENIETVYIKPYDNKTVAKLASKIRYNK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 77565 78269 . - 0 GCA_005502385.1_01531 GCA_005502385.1_01531_gene,GCA_005502385.1_01531_mRNA GCA_005502385.1_01531 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKIILPILIVSLSVILVSCNNNDSEHHNDNNSSDTNTSENKDNEASNEIDEKTNTSDSADNSESSNKQNKEKNDNKKQEKNNDSNKKQQSTDKNKSYLNNFNSKEIEYARVWYQLISTRNDLKGIKNVYVTEIPKGSKVNPQAKNSAIYKEKVVKLEAPMRAGGSVTYSSNGDGTINVYNNIPYKWENSQNSDYSQMNKITKKAIEENIETVYIKPYDNKTVAKLASKIRYNK shell 234 Lipoprotein WP_000720620.1 UPI00000CAE15 UniRef100_A0A6N0I1B0,UniRef50_A0A0M2NSQ5,UniRef90_A0A6N0I1B0 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 78420 79118 . - . GCA_005502385.1_01532_gene GCA_005502385.1_01532 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKRSLLPTLLLASSLTFTGFSATANAEDGAKTVYGENLPNSADTNGDGWANVDFNTSSLPQSAQNQISELSKQKDSGELTQIEYNEKVSSVFNEYQSQSTDIQNNERTQQGKRPFGGVIPNGMTQEEYQELESHVPNPNSVSTEKYNQIVKNESQKIANEENKTINTPQGVLTPVTENKNKSSEGMKNQDSNSQVLPETGESNQSDILSIIGASGLLILGISLLIFRKKAI . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 78420 79118 . - . GCA_005502385.1_01532_mRNA GCA_005502385.1_01532 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKRSLLPTLLLASSLTFTGFSATANAEDGAKTVYGENLPNSADTNGDGWANVDFNTSSLPQSAQNQISELSKQKDSGELTQIEYNEKVSSVFNEYQSQSTDIQNNERTQQGKRPFGGVIPNGMTQEEYQELESHVPNPNSVSTEKYNQIVKNESQKIANEENKTINTPQGVLTPVTENKNKSSEGMKNQDSNSQVLPETGESNQSDILSIIGASGLLILGISLLIFRKKAI . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 78420 79118 . - 0 GCA_005502385.1_01532 GCA_005502385.1_01532_gene,GCA_005502385.1_01532_mRNA GCA_005502385.1_01532 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKRSLLPTLLLASSLTFTGFSATANAEDGAKTVYGENLPNSADTNGDGWANVDFNTSSLPQSAQNQISELSKQKDSGELTQIEYNEKVSSVFNEYQSQSTDIQNNERTQQGKRPFGGVIPNGMTQEEYQELESHVPNPNSVSTEKYNQIVKNESQKIANEENKTINTPQGVLTPVTENKNKSSEGMKNQDSNSQVLPETGESNQSDILSIIGASGLLILGISLLIFRKKAI shell 232 DMAP1-binding domain-containing protein WP_017175396.1 UPI0002E309D8 UniRef100_A0A6N0I170,UniRef50_A0A6N0I170,UniRef90_A0A6N0I170 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 79557 80468 . - . GCA_005502385.1_01533_gene GCA_005502385.1_01533 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTLVCTKFNHDAKSTDYLNISIEEDTLQYIDPNLIKVISNREVGKVATLAQRAQEQIDVFFEKIIDIHLSDFSDTQKRNEFRKLFSHFSEPHHLRLGFSQKGNTGKGTTASELINLFMNEDILSIILNDDGLTIPQKAPLIRNFGDDKLSDLTSNIIMNVIIDFNKSMIQSFPEMKSFLSKETVTYYYFSTNGIWETYDFTPFLFDGNKTLLVPKLFTTYNQTSSLDLMIRVYIEEEIIRLQKQRNTTKKMTKKQFINEFIKGHRMDNMTYFFLNTSSKSHKKFQKELDSKANERRNNNKDDN . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 79557 80468 . - . GCA_005502385.1_01533_mRNA GCA_005502385.1_01533 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTLVCTKFNHDAKSTDYLNISIEEDTLQYIDPNLIKVISNREVGKVATLAQRAQEQIDVFFEKIIDIHLSDFSDTQKRNEFRKLFSHFSEPHHLRLGFSQKGNTGKGTTASELINLFMNEDILSIILNDDGLTIPQKAPLIRNFGDDKLSDLTSNIIMNVIIDFNKSMIQSFPEMKSFLSKETVTYYYFSTNGIWETYDFTPFLFDGNKTLLVPKLFTTYNQTSSLDLMIRVYIEEEIIRLQKQRNTTKKMTKKQFINEFIKGHRMDNMTYFFLNTSSKSHKKFQKELDSKANERRNNNKDDN . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 79557 80468 . - 0 GCA_005502385.1_01533 GCA_005502385.1_01533_gene,GCA_005502385.1_01533_mRNA GCA_005502385.1_01533 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTLVCTKFNHDAKSTDYLNISIEEDTLQYIDPNLIKVISNREVGKVATLAQRAQEQIDVFFEKIIDIHLSDFSDTQKRNEFRKLFSHFSEPHHLRLGFSQKGNTGKGTTASELINLFMNEDILSIILNDDGLTIPQKAPLIRNFGDDKLSDLTSNIIMNVIIDFNKSMIQSFPEMKSFLSKETVTYYYFSTNGIWETYDFTPFLFDGNKTLLVPKLFTTYNQTSSLDLMIRVYIEEEIIRLQKQRNTTKKMTKKQFINEFIKGHRMDNMTYFFLNTSSKSHKKFQKELDSKANERRNNNKDDN cloud 303 hypothetical protein WP_017175395.1 UPI00031E7967 UniRef100_A0A6N0I1E3,UniRef50_A0A6N0I1E3,UniRef90_A0A6N0I1E3 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 80887 81531 . - . GCA_005502385.1_01534_gene GCA_005502385.1_01534 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MLTDVFIYIENYISLVSTHKTIKKGGVQMAKIGYARVSTQDQSLDGQIDTLEEYGCERIFSEKASGRKTKRTELDKCLDYLREGDILVVYKLDRLGRTTKQLIELSQWLDENSIDLHIIDMNVSTKDAMGKMFFTMMSAFAELEANLLSERTKKGLEAARARGRKGGRPSLPDHKKREIKFLYDEQKLSGEEIAEQTGVSRSTVYRIIKESRKI . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 80887 81531 . - . GCA_005502385.1_01534_mRNA GCA_005502385.1_01534 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MLTDVFIYIENYISLVSTHKTIKKGGVQMAKIGYARVSTQDQSLDGQIDTLEEYGCERIFSEKASGRKTKRTELDKCLDYLREGDILVVYKLDRLGRTTKQLIELSQWLDENSIDLHIIDMNVSTKDAMGKMFFTMMSAFAELEANLLSERTKKGLEAARARGRKGGRPSLPDHKKREIKFLYDEQKLSGEEIAEQTGVSRSTVYRIIKESRKI . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 80887 81531 . - 0 GCA_005502385.1_01534 GCA_005502385.1_01534_gene,GCA_005502385.1_01534_mRNA GCA_005502385.1_01534 DNA-invertase hin GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MLTDVFIYIENYISLVSTHKTIKKGGVQMAKIGYARVSTQDQSLDGQIDTLEEYGCERIFSEKASGRKTKRTELDKCLDYLREGDILVVYKLDRLGRTTKQLIELSQWLDENSIDLHIIDMNVSTKDAMGKMFFTMMSAFAELEANLLSERTKKGLEAARARGRKGGRPSLPDHKKREIKFLYDEQKLSGEEIAEQTGVSRSTVYRIIKESRKI cloud 214 Recombinase family protein UniRef50_A0A0M2SPL1,UniRef90_A0A9X4LH02 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 81698 82258 . - . GCA_005502385.1_01535_gene GCA_005502385.1_01535 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKCKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWCINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLSK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 81698 82258 . - . GCA_005502385.1_01535_mRNA GCA_005502385.1_01535 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKCKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWCINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLSK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 81698 82258 . - 0 GCA_005502385.1_01535 GCA_005502385.1_01535_gene,GCA_005502385.1_01535_mRNA GCA_005502385.1_01535 HTH-type transcriptional regulator QacR GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKCKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWCINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLSK shell 186 qacR multidrug-binding transcriptional regulator QacR GO:0003677,GO:0003700,GO:0045892 UPI000197AA6D UniRef100_D2JCF0,UniRef50_P0A0N3,UniRef90_P0A0N3 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 82473 83987 . + . GCA_005502385.1_01536_gene GCA_005502385.1_01536 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MMTSKKRWTALVVLAVSLFVVTMDMTILIMALPELVRELEPSGTQQLWIVDIYSLVLAGFIIPLSAFADKWGRKKALLTGFALFGLVSLAIFFAESAEFVIAIRFLLGIAGALIMPTTLSMIRVIFENPKERATALAVWSIASSIGAVFGPIIGGALLEQFSWHSAFLINVPFAIIAVVAGLFLLPESKLSKEKSHSWDIPSTILSIAGMIGLVWSIKEFSKEGLADIIPWVVIVLAITMIVIFVKRNLSSSDPMLDVRLFKKRSFSAGTIAAFMTMFAMASVLLLASQWLQVVEELSPFKAGLYLLPMAIGDMVFAPIAPGLAARFGPKIVLPSGIGIAAIGMFIMYFFGHPLSYSTMALALILVGAGMASLAVASALIMLETPTSKAGNAAAVEESMYDLGNVFGVAVLGSLSSMLYRVFLDISSFSSKGIVGDLAHVAEESVVGAVEVAKATGIKQLANEAVTSFNDAFVATALVGGIIMIIISIVVYLLIPKSLDITKQK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 82473 83987 . + . GCA_005502385.1_01536_mRNA GCA_005502385.1_01536 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MMTSKKRWTALVVLAVSLFVVTMDMTILIMALPELVRELEPSGTQQLWIVDIYSLVLAGFIIPLSAFADKWGRKKALLTGFALFGLVSLAIFFAESAEFVIAIRFLLGIAGALIMPTTLSMIRVIFENPKERATALAVWSIASSIGAVFGPIIGGALLEQFSWHSAFLINVPFAIIAVVAGLFLLPESKLSKEKSHSWDIPSTILSIAGMIGLVWSIKEFSKEGLADIIPWVVIVLAITMIVIFVKRNLSSSDPMLDVRLFKKRSFSAGTIAAFMTMFAMASVLLLASQWLQVVEELSPFKAGLYLLPMAIGDMVFAPIAPGLAARFGPKIVLPSGIGIAAIGMFIMYFFGHPLSYSTMALALILVGAGMASLAVASALIMLETPTSKAGNAAAVEESMYDLGNVFGVAVLGSLSSMLYRVFLDISSFSSKGIVGDLAHVAEESVVGAVEVAKATGIKQLANEAVTSFNDAFVATALVGGIIMIIISIVVYLLIPKSLDITKQK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 82473 83987 . + 0 GCA_005502385.1_01536 GCA_005502385.1_01536_gene,GCA_005502385.1_01536_mRNA GCA_005502385.1_01536 Antiseptic resistance protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MMTSKKRWTALVVLAVSLFVVTMDMTILIMALPELVRELEPSGTQQLWIVDIYSLVLAGFIIPLSAFADKWGRKKALLTGFALFGLVSLAIFFAESAEFVIAIRFLLGIAGALIMPTTLSMIRVIFENPKERATALAVWSIASSIGAVFGPIIGGALLEQFSWHSAFLINVPFAIIAVVAGLFLLPESKLSKEKSHSWDIPSTILSIAGMIGLVWSIKEFSKEGLADIIPWVVIVLAITMIVIFVKRNLSSSDPMLDVRLFKKRSFSAGTIAAFMTMFAMASVLLLASQWLQVVEELSPFKAGLYLLPMAIGDMVFAPIAPGLAARFGPKIVLPSGIGIAAIGMFIMYFFGHPLSYSTMALALILVGAGMASLAVASALIMLETPTSKAGNAAAVEESMYDLGNVFGVAVLGSLSSMLYRVFLDISSFSSKGIVGDLAHVAEESVVGAVEVAKATGIKQLANEAVTSFNDAFVATALVGGIIMIIISIVVYLLIPKSLDITKQK shell 504 qacA quaternary ammonium compound efflux MFS transporter QacA GO:0005886,GO:0022857,GO:0046677 UPI0001BEF54B UniRef100_P0A0J8,UniRef50_P0A0J8,UniRef90_P0A0J8 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 84192 84752 . + . GCA_005502385.1_01537_gene GCA_005502385.1_01537 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNRADIFKIFDVELNITIFLGALVATFIYFISYMNNVNELITLCLTLAFPAYLLKISRSFEVILLEEKIKNSKIKICDKDRIEREILVKKNLIDELLFPNRVIKKYTLTILIYSIGIIILLLLCNMLSYGIGENVNFIWRLLACYVTSVTVIIVALIIMIMIFDLIIGLLLNFQIFLKNKKYDDFL . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 84192 84752 . + . GCA_005502385.1_01537_mRNA GCA_005502385.1_01537 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNRADIFKIFDVELNITIFLGALVATFIYFISYMNNVNELITLCLTLAFPAYLLKISRSFEVILLEEKIKNSKIKICDKDRIEREILVKKNLIDELLFPNRVIKKYTLTILIYSIGIIILLLLCNMLSYGIGENVNFIWRLLACYVTSVTVIIVALIIMIMIFDLIIGLLLNFQIFLKNKKYDDFL . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 84192 84752 . + 0 GCA_005502385.1_01537 GCA_005502385.1_01537_gene,GCA_005502385.1_01537_mRNA GCA_005502385.1_01537 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNRADIFKIFDVELNITIFLGALVATFIYFISYMNNVNELITLCLTLAFPAYLLKISRSFEVILLEEKIKNSKIKICDKDRIEREILVKKNLIDELLFPNRVIKKYTLTILIYSIGIIILLLLCNMLSYGIGENVNFIWRLLACYVTSVTVIIVALIIMIMIFDLIIGLLLNFQIFLKNKKYDDFL shell 186 hypothetical protein WP_001077893.1 UPI00000CAE26 UniRef100_K9AVR2,UniRef50_K9AVR2,UniRef90_K9AVR2 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 85075 85785 . - . GCA_005502385.1_01538_gene GCA_005502385.1_01538 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKSVKEISKELEVSKQTIFNNIKRLNIETIKKDNTSFIKNDIDVEKIIQRVTHNKKKYGFEDTITNSEKVKKDNSHKESKHNVQIIELLEKQIDTLNKQLEKQEKRHEVTIEFYRKELQERSKLLENQQVLTLESNKKIQRLESELEEERQLNYSANKRQDFEVQETMGDTDSIKIDSDNQEEKIVSQFSDTSKDKNEYKQQNSELTKDDKLDDQKEDMINENHSKKSFWSRIFGN . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 85075 85785 . - . GCA_005502385.1_01538_mRNA GCA_005502385.1_01538 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKSVKEISKELEVSKQTIFNNIKRLNIETIKKDNTSFIKNDIDVEKIIQRVTHNKKKYGFEDTITNSEKVKKDNSHKESKHNVQIIELLEKQIDTLNKQLEKQEKRHEVTIEFYRKELQERSKLLENQQVLTLESNKKIQRLESELEEERQLNYSANKRQDFEVQETMGDTDSIKIDSDNQEEKIVSQFSDTSKDKNEYKQQNSELTKDDKLDDQKEDMINENHSKKSFWSRIFGN . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 85075 85785 . - 0 GCA_005502385.1_01538 GCA_005502385.1_01538_gene,GCA_005502385.1_01538_mRNA GCA_005502385.1_01538 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKSVKEISKELEVSKQTIFNNIKRLNIETIKKDNTSFIKNDIDVEKIIQRVTHNKKKYGFEDTITNSEKVKKDNSHKESKHNVQIIELLEKQIDTLNKQLEKQEKRHEVTIEFYRKELQERSKLLENQQVLTLESNKKIQRLESELEEERQLNYSANKRQDFEVQETMGDTDSIKIDSDNQEEKIVSQFSDTSKDKNEYKQQNSELTKDDKLDDQKEDMINENHSKKSFWSRIFGN cloud 236 Regulator of chromosome segregation-like C-terminal domain-containing protein WP_017175393.1 UPI0002DB02EF UniRef100_A0A6N0I1C7,UniRef50_D2J7Y8,UniRef90_D2J8Q4 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 86169 87125 . + . GCA_005502385.1_01539_gene GCA_005502385.1_01539 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSRKNIKNQASQNFYMLHKALFVNEKYKKLSDSAKVTYAILNDRVSLSIKNNWIDDNGDIYFIFTNESLQNILDKSKNTITKIKKELQEVGLLEQIRTGFNRPNKLYLHDIETNISVEKNIQTLSATYDNKESQNLGLQNPEFWDSRISKFGTPESQILDPNDTDYNDTDYIKTNSNDTYDLNDKKLTSPSNHTSHSNHYYSKFNDDALKFQLLEELPQSIQTYLSNFSVTEIKLIKSVLLKAKTSFNNSIDTYYLLEDMEIEILHVLKRFKAVLIQKNETVEAMQGYLMKSLKSEFAEVHTLNKRRDNLPITSLFNQ . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 86169 87125 . + . GCA_005502385.1_01539_mRNA GCA_005502385.1_01539 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSRKNIKNQASQNFYMLHKALFVNEKYKKLSDSAKVTYAILNDRVSLSIKNNWIDDNGDIYFIFTNESLQNILDKSKNTITKIKKELQEVGLLEQIRTGFNRPNKLYLHDIETNISVEKNIQTLSATYDNKESQNLGLQNPEFWDSRISKFGTPESQILDPNDTDYNDTDYIKTNSNDTYDLNDKKLTSPSNHTSHSNHYYSKFNDDALKFQLLEELPQSIQTYLSNFSVTEIKLIKSVLLKAKTSFNNSIDTYYLLEDMEIEILHVLKRFKAVLIQKNETVEAMQGYLMKSLKSEFAEVHTLNKRRDNLPITSLFNQ . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 86169 87125 . + 0 GCA_005502385.1_01539 GCA_005502385.1_01539_gene,GCA_005502385.1_01539_mRNA GCA_005502385.1_01539 hypothetical protein """""" GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSRKNIKNQASQNFYMLHKALFVNEKYKKLSDSAKVTYAILNDRVSLSIKNNWIDDNGDIYFIFTNESLQNILDKSKNTITKIKKELQEVGLLEQIRTGFNRPNKLYLHDIETNISVEKNIQTLSATYDNKESQNLGLQNPEFWDSRISKFGTPESQILDPNDTDYNDTDYIKTNSNDTYDLNDKKLTSPSNHTSHSNHYYSKFNDDALKFQLLEELPQSIQTYLSNFSVTEIKLIKSVLLKAKTSFNNSIDTYYLLEDMEIEILHVLKRFKAVLIQKNETVEAMQGYLMKSLKSEFAEVHTLNKRRDNLPITSLFNQ shell 318 repA Replication-associated protein RepA WP_017175392.1 UPI0002E63343 UniRef100_A0A6N0I164,UniRef50_A0A380JM21,UniRef90_Q5HS39 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 87537 87776 . - . GCA_005502385.1_01540_gene GCA_005502385.1_01540 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNDFKNLKKINVEIEKAELRKHRLQNLDRKERAHRLIRKGAMLEKYFECEHLSSAETEELLKMYSKYINTNKPNKFKKK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 87537 87776 . - . GCA_005502385.1_01540_mRNA GCA_005502385.1_01540 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNDFKNLKKINVEIEKAELRKHRLQNLDRKERAHRLIRKGAMLEKYFECEHLSSAETEELLKMYSKYINTNKPNKFKKK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 87537 87776 . - 0 GCA_005502385.1_01540 GCA_005502385.1_01540_gene,GCA_005502385.1_01540_mRNA GCA_005502385.1_01540 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNDFKNLKKINVEIEKAELRKHRLQNLDRKERAHRLIRKGAMLEKYFECEHLSSAETEELLKMYSKYINTNKPNKFKKK shell 79 DUF3847 domain-containing protein WP_017175391.1 UPI0002ED00EB UniRef100_A0A6N0I1Q4,UniRef50_A0A0H2VKB0,UniRef90_A0A6N0I1Q4 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 87793 88062 . - . GCA_005502385.1_01541_gene GCA_005502385.1_01541 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSKIKQTDITKLSQLEQQIEQLKKQKKKQEEQLSNKIGGYFLNELDLNMINSSDELYKIMDKVIEEFNKDIEQNSIDENNENLTEDKIN . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 87793 88062 . - . GCA_005502385.1_01541_mRNA GCA_005502385.1_01541 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSKIKQTDITKLSQLEQQIEQLKKQKKKQEEQLSNKIGGYFLNELDLNMINSSDELYKIMDKVIEEFNKDIEQNSIDENNENLTEDKIN . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 87793 88062 . - 0 GCA_005502385.1_01541 GCA_005502385.1_01541_gene,GCA_005502385.1_01541_mRNA GCA_005502385.1_01541 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSKIKQTDITKLSQLEQQIEQLKKQKKKQEEQLSNKIGGYFLNELDLNMINSSDELYKIMDKVIEEFNKDIEQNSIDENNENLTEDKIN shell 89 Mobilization protein WP_017175390.1 UPI0003078D51 UniRef100_A0A6N0I1H1,UniRef50_A0A9Q5P395,UniRef90_A0A6N0I1H1 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 88265 90187 . + . GCA_005502385.1_01542_gene GCA_005502385.1_01542 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNKGYFMLRVTNINRATKNIVASASYRSDEALYSERTDEKIKFRNHTIKPESMILTPQHAPEWTKDRQRLWNEVDKVEKNNAKTKNPRLAKEVLLSLPNDFDREVQTELTKDFIKSEFVDKGMVADISIHRDDINNPHAHVLLTQRPFNADGTWGKKTKTRTQYDENGNAILNKNGNKVRKQERFADFDFKEVRKHWELKLNQYSEREQSLRRYDSRSFEAQGLEKIAEIPLTREEYRLEQNERKRCEKEGIEYQPVTYYGQKNEQIRRYNRGEVSQLFSDKEKEQAQNEIRLFIQNANEQVSKNEQSYSILFDRYQREVGYSEAKETIKNTFDSASTFGRKIQNDLLKNEIKRRQLKFYAKNYDENYQFRKEIESKGYSQQEFVNTVETNYKALLNEKNKLESREEKRKEIYQSAKDVYLTESEKNHLIVQQMYPKSHHHFSHDEKAFIVDEAQKGNIIKATHVQYLFKQNNNIPNDVLLEDTYKKASKDIFFSQKHLKNLEKDSFEYNVELPFIKEKEKEIDSYKEHIDDDLRIDIGDKNFEKVKDQTPNEKVQLLIKLEKYNHVDQEEVIEKHINQVDRNDHDNRIEHENEQTNHINLPTINASDFLMYYANETEKQNNINHQKKKKKQERNNQMRR . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 88265 90187 . + . GCA_005502385.1_01542_mRNA GCA_005502385.1_01542 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNKGYFMLRVTNINRATKNIVASASYRSDEALYSERTDEKIKFRNHTIKPESMILTPQHAPEWTKDRQRLWNEVDKVEKNNAKTKNPRLAKEVLLSLPNDFDREVQTELTKDFIKSEFVDKGMVADISIHRDDINNPHAHVLLTQRPFNADGTWGKKTKTRTQYDENGNAILNKNGNKVRKQERFADFDFKEVRKHWELKLNQYSEREQSLRRYDSRSFEAQGLEKIAEIPLTREEYRLEQNERKRCEKEGIEYQPVTYYGQKNEQIRRYNRGEVSQLFSDKEKEQAQNEIRLFIQNANEQVSKNEQSYSILFDRYQREVGYSEAKETIKNTFDSASTFGRKIQNDLLKNEIKRRQLKFYAKNYDENYQFRKEIESKGYSQQEFVNTVETNYKALLNEKNKLESREEKRKEIYQSAKDVYLTESEKNHLIVQQMYPKSHHHFSHDEKAFIVDEAQKGNIIKATHVQYLFKQNNNIPNDVLLEDTYKKASKDIFFSQKHLKNLEKDSFEYNVELPFIKEKEKEIDSYKEHIDDDLRIDIGDKNFEKVKDQTPNEKVQLLIKLEKYNHVDQEEVIEKHINQVDRNDHDNRIEHENEQTNHINLPTINASDFLMYYANETEKQNNINHQKKKKKQERNNQMRR . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 88265 90187 . + 0 GCA_005502385.1_01542 GCA_005502385.1_01542_gene,GCA_005502385.1_01542_mRNA GCA_005502385.1_01542 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNKGYFMLRVTNINRATKNIVASASYRSDEALYSERTDEKIKFRNHTIKPESMILTPQHAPEWTKDRQRLWNEVDKVEKNNAKTKNPRLAKEVLLSLPNDFDREVQTELTKDFIKSEFVDKGMVADISIHRDDINNPHAHVLLTQRPFNADGTWGKKTKTRTQYDENGNAILNKNGNKVRKQERFADFDFKEVRKHWELKLNQYSEREQSLRRYDSRSFEAQGLEKIAEIPLTREEYRLEQNERKRCEKEGIEYQPVTYYGQKNEQIRRYNRGEVSQLFSDKEKEQAQNEIRLFIQNANEQVSKNEQSYSILFDRYQREVGYSEAKETIKNTFDSASTFGRKIQNDLLKNEIKRRQLKFYAKNYDENYQFRKEIESKGYSQQEFVNTVETNYKALLNEKNKLESREEKRKEIYQSAKDVYLTESEKNHLIVQQMYPKSHHHFSHDEKAFIVDEAQKGNIIKATHVQYLFKQNNNIPNDVLLEDTYKKASKDIFFSQKHLKNLEKDSFEYNVELPFIKEKEKEIDSYKEHIDDDLRIDIGDKNFEKVKDQTPNEKVQLLIKLEKYNHVDQEEVIEKHINQVDRNDHDNRIEHENEQTNHINLPTINASDFLMYYANETEKQNNINHQKKKKKQERNNQMRR shell 640 Mobilization protein UniRef50_A0A0U2CJ20,UniRef90_A0A0U2CJ20 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 90461 90874 . + . GCA_005502385.1_01543_gene GCA_005502385.1_01543 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 METKIGHQIQKLRKSKNMSQEKLAEKLGVSRHSISNWEREVSNPDLKTILEITKLFNVSLNQLIKGVEIMQVNKYVYSALAFFLGGFGAHKFYVKKNKNALLYLLFCWTGIPGVIGMVEGVLTLMRPSDSENNIEIN . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 90461 90874 . + . GCA_005502385.1_01543_mRNA GCA_005502385.1_01543 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 METKIGHQIQKLRKSKNMSQEKLAEKLGVSRHSISNWEREVSNPDLKTILEITKLFNVSLNQLIKGVEIMQVNKYVYSALAFFLGGFGAHKFYVKKNKNALLYLLFCWTGIPGVIGMVEGVLTLMRPSDSENNIEIN . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 90461 90874 . + 0 GCA_005502385.1_01543 GCA_005502385.1_01543_gene,GCA_005502385.1_01543_mRNA GCA_005502385.1_01543 hypothetical protein """""" GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 METKIGHQIQKLRKSKNMSQEKLAEKLGVSRHSISNWEREVSNPDLKTILEITKLFNVSLNQLIKGVEIMQVNKYVYSALAFFLGGFGAHKFYVKKNKNALLYLLFCWTGIPGVIGMVEGVLTLMRPSDSENNIEIN shell 137 NINE protein WP_000448282.1 UPI00000CAE13 UniRef100_A0A6N0I1E8,UniRef50_Q4L9W0,UniRef90_A0A6N0I1E8 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 90910 91071 . + . GCA_005502385.1_01544_gene GCA_005502385.1_01544 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTTAIVGGLIITTLLLIGEKLSKKKKNSNILKNYGMMIHEHIRFRRSLNILLK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 90910 91071 . + . GCA_005502385.1_01544_mRNA GCA_005502385.1_01544 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTTAIVGGLIITTLLLIGEKLSKKKKNSNILKNYGMMIHEHIRFRRSLNILLK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 90910 91071 . + 0 GCA_005502385.1_01544 GCA_005502385.1_01544_gene,GCA_005502385.1_01544_mRNA GCA_005502385.1_01544 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTTAIVGGLIITTLLLIGEKLSKKKKNSNILKNYGMMIHEHIRFRRSLNILLK shell 53 hypothetical protein . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 91413 92078 . + . GCA_005502385.1_01545_gene GCA_005502385.1_01545 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MLFWSTVLYFLNKVLDIVVDYYSYLANLFLFLYKNFSFPLLFLVIIFIFREEISSLLRRVKQINFQSNSGEISFLFHELENLKGKMENSENFQLRQYGEDLREKGHLGAGPNEYEDPDRQQRDYYFGLIHSFASIYKELGKNGPIKTIEVLYEAYTFLTKDKNLKNDEPTKIIQEVYDTVIHLKEKGAYLFDEELVYNYRSFIELSYKGLEERLSKNQTKN . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 91413 92078 . + . GCA_005502385.1_01545_mRNA GCA_005502385.1_01545 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MLFWSTVLYFLNKVLDIVVDYYSYLANLFLFLYKNFSFPLLFLVIIFIFREEISSLLRRVKQINFQSNSGEISFLFHELENLKGKMENSENFQLRQYGEDLREKGHLGAGPNEYEDPDRQQRDYYFGLIHSFASIYKELGKNGPIKTIEVLYEAYTFLTKDKNLKNDEPTKIIQEVYDTVIHLKEKGAYLFDEELVYNYRSFIELSYKGLEERLSKNQTKN . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 91413 92078 . + 0 GCA_005502385.1_01545 GCA_005502385.1_01545_gene,GCA_005502385.1_01545_mRNA GCA_005502385.1_01545 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MLFWSTVLYFLNKVLDIVVDYYSYLANLFLFLYKNFSFPLLFLVIIFIFREEISSLLRRVKQINFQSNSGEISFLFHELENLKGKMENSENFQLRQYGEDLREKGHLGAGPNEYEDPDRQQRDYYFGLIHSFASIYKELGKNGPIKTIEVLYEAYTFLTKDKNLKNDEPTKIIQEVYDTVIHLKEKGAYLFDEELVYNYRSFIELSYKGLEERLSKNQTKN cloud 221 hypothetical protein WP_002449407.1 UPI00019FC7D5 UniRef100_UPI00019FC7D5,UniRef50_A0A6N0I2E0,UniRef90_A0A6N0I2E0 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 92670 92942 . + . GCA_005502385.1_01546_gene GCA_005502385.1_01546 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MITFIYQLILFFIIIGTYALMRGGYMGIEWNFLLSMYGMFVGYLVMFYFSIYTNTDFSRRTIKIIATISIILTSIILVILGYLLFILLTE . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 92670 92942 . + . GCA_005502385.1_01546_mRNA GCA_005502385.1_01546 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MITFIYQLILFFIIIGTYALMRGGYMGIEWNFLLSMYGMFVGYLVMFYFSIYTNTDFSRRTIKIIATISIILTSIILVILGYLLFILLTE . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 92670 92942 . + 0 GCA_005502385.1_01546 GCA_005502385.1_01546_gene,GCA_005502385.1_01546_mRNA GCA_005502385.1_01546 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MITFIYQLILFFIIIGTYALMRGGYMGIEWNFLLSMYGMFVGYLVMFYFSIYTNTDFSRRTIKIIATISIILTSIILVILGYLLFILLTE shell 90 hypothetical protein WP_039984118.1 UPI00058719D6 UniRef100_A0A4V6MZG6,UniRef50_A0A8X8KGD8,UniRef90_A0A8X8KGD8 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 93454 94083 . - . GCA_005502385.1_01547_gene GCA_005502385.1_01547 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MEESLNRLRKPAIQVVNIFSLLFIFFSYIQYQFDLTLERTPNYLIITTGFALVINLLALFQFFEKKIDNPINKAKRYLIVNILSLYVSYLTFYNLYFFVAAEHQYYLDKYWYIGFITLLVCTTMHILSVLLMRFSPKWLKYDKRIVIIILKAIASLIYIQKIIEYIIIPNIADSHFVFLMSILYIFACNFLVTIYYLLYGRVYTETKNK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 93454 94083 . - . GCA_005502385.1_01547_mRNA GCA_005502385.1_01547 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MEESLNRLRKPAIQVVNIFSLLFIFFSYIQYQFDLTLERTPNYLIITTGFALVINLLALFQFFEKKIDNPINKAKRYLIVNILSLYVSYLTFYNLYFFVAAEHQYYLDKYWYIGFITLLVCTTMHILSVLLMRFSPKWLKYDKRIVIIILKAIASLIYIQKIIEYIIIPNIADSHFVFLMSILYIFACNFLVTIYYLLYGRVYTETKNK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 93454 94083 . - 0 GCA_005502385.1_01547 GCA_005502385.1_01547_gene,GCA_005502385.1_01547_mRNA GCA_005502385.1_01547 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MEESLNRLRKPAIQVVNIFSLLFIFFSYIQYQFDLTLERTPNYLIITTGFALVINLLALFQFFEKKIDNPINKAKRYLIVNILSLYVSYLTFYNLYFFVAAEHQYYLDKYWYIGFITLLVCTTMHILSVLLMRFSPKWLKYDKRIVIIILKAIASLIYIQKIIEYIIIPNIADSHFVFLMSILYIFACNFLVTIYYLLYGRVYTETKNK shell 209 DUF5079 domain-containing protein WP_048680339.1 UPI00066178BD UniRef100_UPI00215C8F31,UniRef50_A0A2T4PY05,UniRef90_A0AAE5MYW9 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 94451 94714 . + . GCA_005502385.1_01548_gene GCA_005502385.1_01548 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKQYMLSKVLLSVSIVTESVVAPIVVSNANQIHAADKQDGISNLTQKNKSVLHLSITDSNITGKINDNEILTLSDGKTTKQIGINVL . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 94451 94714 . + . GCA_005502385.1_01548_mRNA GCA_005502385.1_01548 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKQYMLSKVLLSVSIVTESVVAPIVVSNANQIHAADKQDGISNLTQKNKSVLHLSITDSNITGKINDNEILTLSDGKTTKQIGINVL . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 94451 94714 . + 0 GCA_005502385.1_01548 GCA_005502385.1_01548_gene,GCA_005502385.1_01548_mRNA GCA_005502385.1_01548 hypothetical protein """""" GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKQYMLSKVLLSVSIVTESVVAPIVVSNANQIHAADKQDGISNLTQKNKSVLHLSITDSNITGKINDNEILTLSDGKTTKQIGINVL shell 87 hypothetical protein WP_048680341.1 UPI00066186CF UniRef100_UPI00066186CF,UniRef50_A0A4Q9WTS2,UniRef90_A0A4Q9WTS2 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 94942 95853 . - . GCA_005502385.1_01549_gene GCA_005502385.1_01549 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MEKLRVGLEWFLNPDHMPLILGIEKGWFKEQDLEIEMIEPEEHFDALDEIEKGTMDIAITEPIHLVEDKASNQNVVGFARFLHTNGGIMYKKDKGIKTPKDLIGKRLQYPGAPGLGGIAIAKTMIETDGAQYTDGDIIPVNNSFYHTDALLNDKADAATLIFENFEILEAKSKGLNVDYFALKDYNVPDFCQLIFITTPDKLHSEEEKIKTFIKVIQKAIQYIKTNLEEAINIYSSYTNTDVSEDLNKSTIQATAKCFTNDLSMSSDFYNDLQLWLKETGKIKKTIEPKEYFTNQLLFSRYAN . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 94942 95853 . - . GCA_005502385.1_01549_mRNA GCA_005502385.1_01549 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MEKLRVGLEWFLNPDHMPLILGIEKGWFKEQDLEIEMIEPEEHFDALDEIEKGTMDIAITEPIHLVEDKASNQNVVGFARFLHTNGGIMYKKDKGIKTPKDLIGKRLQYPGAPGLGGIAIAKTMIETDGAQYTDGDIIPVNNSFYHTDALLNDKADAATLIFENFEILEAKSKGLNVDYFALKDYNVPDFCQLIFITTPDKLHSEEEKIKTFIKVIQKAIQYIKTNLEEAINIYSSYTNTDVSEDLNKSTIQATAKCFTNDLSMSSDFYNDLQLWLKETGKIKKTIEPKEYFTNQLLFSRYAN . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 94942 95853 . - 0 GCA_005502385.1_01549 GCA_005502385.1_01549_gene,GCA_005502385.1_01549_mRNA GCA_005502385.1_01549 Putative thiamine biosynthesis protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MEKLRVGLEWFLNPDHMPLILGIEKGWFKEQDLEIEMIEPEEHFDALDEIEKGTMDIAITEPIHLVEDKASNQNVVGFARFLHTNGGIMYKKDKGIKTPKDLIGKRLQYPGAPGLGGIAIAKTMIETDGAQYTDGDIIPVNNSFYHTDALLNDKADAATLIFENFEILEAKSKGLNVDYFALKDYNVPDFCQLIFITTPDKLHSEEEKIKTFIKVIQKAIQYIKTNLEEAINIYSSYTNTDVSEDLNKSTIQATAKCFTNDLSMSSDFYNDLQLWLKETGKIKKTIEPKEYFTNQLLFSRYAN shell 303 Thiamine pyrimidine synthase WP_048680344.1 UPI0006616373 UniRef100_UPI0006616373,UniRef50_Q5HKL4,UniRef90_A0A4Q9WQ48 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 95914 96015 . - . GCA_005502385.1_01550_gene GCA_005502385.1_01550 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 95914 96015 . - . GCA_005502385.1_01550_mRNA GCA_005502385.1_01550 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 . . . . . . . GCA_005502385.1|SCOV01000004.1 Infernal:001001 misc_RNA 95914 96015 64.4 - . GCA_005502385.1_01550 GCA_005502385.1_01550_gene,GCA_005502385.1_01550_mRNA GCA_005502385.1_01550 TPP GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 96339 97382 . + . GCA_005502385.1_01551_gene GCA_005502385.1_01551 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDLLIGTLFLVLVLVIFTLFTYKAPSGMRAMGALANAAIATFLVEAFNKYVGGEVFGIKFLEQLGDAAGGLGGVAAAGLTALAIGVSPVYALVIGAACGGLDLLPGFFAGYIVGYLMKYTEKYVPDGVDLIGSIVLLAPLARLIATGLTPVVNNTLLKIGDIIKSSTDTNPIIMGIILGGIITVVGTAPLSSMALTALLGLTGVPMAIGAMAAFSSAFMNGTLFHRLKLGDRKSTISVSIEPLSQADIVSANPIPVYVTNFFGGAVAGLIIALSGMINDATGTATPIAGFLVMFGFNSPMKVIIYGVVMAIVGGLAGFLGSLVFKKYPIVTKQDMIDREAKRKVKTA . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 96339 97382 . + . GCA_005502385.1_01551_mRNA GCA_005502385.1_01551 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDLLIGTLFLVLVLVIFTLFTYKAPSGMRAMGALANAAIATFLVEAFNKYVGGEVFGIKFLEQLGDAAGGLGGVAAAGLTALAIGVSPVYALVIGAACGGLDLLPGFFAGYIVGYLMKYTEKYVPDGVDLIGSIVLLAPLARLIATGLTPVVNNTLLKIGDIIKSSTDTNPIIMGIILGGIITVVGTAPLSSMALTALLGLTGVPMAIGAMAAFSSAFMNGTLFHRLKLGDRKSTISVSIEPLSQADIVSANPIPVYVTNFFGGAVAGLIIALSGMINDATGTATPIAGFLVMFGFNSPMKVIIYGVVMAIVGGLAGFLGSLVFKKYPIVTKQDMIDREAKRKVKTA . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 96339 97382 . + 0 GCA_005502385.1_01551 GCA_005502385.1_01551_gene,GCA_005502385.1_01551_mRNA GCA_005502385.1_01551 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDLLIGTLFLVLVLVIFTLFTYKAPSGMRAMGALANAAIATFLVEAFNKYVGGEVFGIKFLEQLGDAAGGLGGVAAAGLTALAIGVSPVYALVIGAACGGLDLLPGFFAGYIVGYLMKYTEKYVPDGVDLIGSIVLLAPLARLIATGLTPVVNNTLLKIGDIIKSSTDTNPIIMGIILGGIITVVGTAPLSSMALTALLGLTGVPMAIGAMAAFSSAFMNGTLFHRLKLGDRKSTISVSIEPLSQADIVSANPIPVYVTNFFGGAVAGLIIALSGMINDATGTATPIAGFLVMFGFNSPMKVIIYGVVMAIVGGLAGFLGSLVFKKYPIVTKQDMIDREAKRKVKTA persistent 347 frwC PTS sugar transporter subunit IIC COG1299,G UniRef50_K9ANZ7,UniRef90_A0A657ZS02 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 97561 98559 . + . GCA_005502385.1_01552_gene GCA_005502385.1_01552 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MQNLRNRNFLTLLDFSKKEMEFLLNLSEDLKRAKYAGIEQQKLKGKNIALIFEKNSTRTRCAFETAAYDQGAHVTYLGPTGTQMGVKETAKDTARVLGGMYDGIEYRGFSQRTIEEIAEYAGVPVWNGLTNEDHPTQVLADFLTAKEVLKKPYEDIHFTYIGDGRNNMANALMQGAAIMGMTFHLVCPKELRPKDELLKTCQSLADKNGGTILVTDNIDQGVKGSDVIATDVWVSMGEPDDTWEERIKLLEPYRVTKELIEKTGNPHTIFEHCLPAFHNAETEIGKQIKEKYGLNEMEVTDEVFESDRSVVFQEAENRAHTIKAVMVATLGE . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 97561 98559 . + . GCA_005502385.1_01552_mRNA GCA_005502385.1_01552 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MQNLRNRNFLTLLDFSKKEMEFLLNLSEDLKRAKYAGIEQQKLKGKNIALIFEKNSTRTRCAFETAAYDQGAHVTYLGPTGTQMGVKETAKDTARVLGGMYDGIEYRGFSQRTIEEIAEYAGVPVWNGLTNEDHPTQVLADFLTAKEVLKKPYEDIHFTYIGDGRNNMANALMQGAAIMGMTFHLVCPKELRPKDELLKTCQSLADKNGGTILVTDNIDQGVKGSDVIATDVWVSMGEPDDTWEERIKLLEPYRVTKELIEKTGNPHTIFEHCLPAFHNAETEIGKQIKEKYGLNEMEVTDEVFESDRSVVFQEAENRAHTIKAVMVATLGE . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 97561 98559 . + 0 GCA_005502385.1_01552 GCA_005502385.1_01552_gene,GCA_005502385.1_01552_mRNA GCA_005502385.1_01552 Ornithine carbamoyltransferase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MQNLRNRNFLTLLDFSKKEMEFLLNLSEDLKRAKYAGIEQQKLKGKNIALIFEKNSTRTRCAFETAAYDQGAHVTYLGPTGTQMGVKETAKDTARVLGGMYDGIEYRGFSQRTIEEIAEYAGVPVWNGLTNEDHPTQVLADFLTAKEVLKKPYEDIHFTYIGDGRNNMANALMQGAAIMGMTFHLVCPKELRPKDELLKTCQSLADKNGGTILVTDNIDQGVKGSDVIATDVWVSMGEPDDTWEERIKLLEPYRVTKELIEKTGNPHTIFEHCLPAFHNAETEIGKQIKEKYGLNEMEVTDEVFESDRSVVFQEAENRAHTIKAVMVATLGE persistent 332 argF ornithine carbamoyltransferase 2.1.3.3 GO:0004585,GO:0042450 WP_048761618.1 UPI000660307F UniRef100_UPI000660307F,UniRef50_P08308,UniRef90_A0A6N0I2D1 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 98581 99510 . + . GCA_005502385.1_01553_gene GCA_005502385.1_01553 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSKIVVALGGNALGESPKEQLELVKGTAQSLVGLVNKGYEVVISHGNGPQVGSINLGLNYAAEHEQGPPFPFPECGAMSQAYIGYQMQESLLNELHTLGINKEVVTLVTQVEVANDDPAFQHPTKPIGLFYTEEQADKMRQEKGYTFMEDAGRGYRRVVPSPQPINIVELDSIETLIKHGTLVIAAGGGGIPVVKEQGRYQGVDAVIDKDKTSALLAAHLQSDQLMILTAVDYVYINYGKDNQEGLSDVTVDDMKEYIADNQFAKGSMLPKVEAALQFIEKNPKGSVLITSLSGLNDALEGKIGTRITK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 98581 99510 . + . GCA_005502385.1_01553_mRNA GCA_005502385.1_01553 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSKIVVALGGNALGESPKEQLELVKGTAQSLVGLVNKGYEVVISHGNGPQVGSINLGLNYAAEHEQGPPFPFPECGAMSQAYIGYQMQESLLNELHTLGINKEVVTLVTQVEVANDDPAFQHPTKPIGLFYTEEQADKMRQEKGYTFMEDAGRGYRRVVPSPQPINIVELDSIETLIKHGTLVIAAGGGGIPVVKEQGRYQGVDAVIDKDKTSALLAAHLQSDQLMILTAVDYVYINYGKDNQEGLSDVTVDDMKEYIADNQFAKGSMLPKVEAALQFIEKNPKGSVLITSLSGLNDALEGKIGTRITK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 98581 99510 . + 0 GCA_005502385.1_01553 GCA_005502385.1_01553_gene,GCA_005502385.1_01553_mRNA GCA_005502385.1_01553 Carbamate kinase 1 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSKIVVALGGNALGESPKEQLELVKGTAQSLVGLVNKGYEVVISHGNGPQVGSINLGLNYAAEHEQGPPFPFPECGAMSQAYIGYQMQESLLNELHTLGINKEVVTLVTQVEVANDDPAFQHPTKPIGLFYTEEQADKMRQEKGYTFMEDAGRGYRRVVPSPQPINIVELDSIETLIKHGTLVIAAGGGGIPVVKEQGRYQGVDAVIDKDKTSALLAAHLQSDQLMILTAVDYVYINYGKDNQEGLSDVTVDDMKEYIADNQFAKGSMLPKVEAALQFIEKNPKGSVLITSLSGLNDALEGKIGTRITK persistent 309 arcC carbamate kinase 2.7.2.2 GO:0006520,GO:0008804 UniRef50_Q4L9V7,UniRef90_A0A6N0I2C4 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 99760 100725 . + . GCA_005502385.1_01554_gene GCA_005502385.1_01554 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTLNLAERVLNGEALTKEECLSLFQDETIDTFELLNEAYIVRKHYYGKKVKLNMILNAKSGICPEDCGYCGQSVKMKEKQRYALVDQEQIKAGAQVATDHKIGTYCIVMSGRGPSNKEVNHICDTVEDIKAIHPQLKICACLGLVDDEQATQLKEAGVDRYNHNLNTSERYHEEVVSTHTYEDRVNTVEIMKEHNISPCSGVICGMGETDEDIIDMAFALKEIDADSIPVNFLHPIKGTKFGGLDLLSPTKCLRILALFRLINPTKEIRIAGGREVNLRSLQATALQAANSIFVGDYLVTGGQPNELDYQMIEDMGFEIDG . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 99760 100725 . + . GCA_005502385.1_01554_mRNA GCA_005502385.1_01554 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTLNLAERVLNGEALTKEECLSLFQDETIDTFELLNEAYIVRKHYYGKKVKLNMILNAKSGICPEDCGYCGQSVKMKEKQRYALVDQEQIKAGAQVATDHKIGTYCIVMSGRGPSNKEVNHICDTVEDIKAIHPQLKICACLGLVDDEQATQLKEAGVDRYNHNLNTSERYHEEVVSTHTYEDRVNTVEIMKEHNISPCSGVICGMGETDEDIIDMAFALKEIDADSIPVNFLHPIKGTKFGGLDLLSPTKCLRILALFRLINPTKEIRIAGGREVNLRSLQATALQAANSIFVGDYLVTGGQPNELDYQMIEDMGFEIDG . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 99760 100725 . + 0 GCA_005502385.1_01554 GCA_005502385.1_01554_gene,GCA_005502385.1_01554_mRNA GCA_005502385.1_01554 Biotin synthase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTLNLAERVLNGEALTKEECLSLFQDETIDTFELLNEAYIVRKHYYGKKVKLNMILNAKSGICPEDCGYCGQSVKMKEKQRYALVDQEQIKAGAQVATDHKIGTYCIVMSGRGPSNKEVNHICDTVEDIKAIHPQLKICACLGLVDDEQATQLKEAGVDRYNHNLNTSERYHEEVVSTHTYEDRVNTVEIMKEHNISPCSGVICGMGETDEDIIDMAFALKEIDADSIPVNFLHPIKGTKFGGLDLLSPTKCLRILALFRLINPTKEIRIAGGREVNLRSLQATALQAANSIFVGDYLVTGGQPNELDYQMIEDMGFEIDG persistent 321 bioB biotin synthase BioB 2.8.1.6 GO:0004076,GO:0009102,GO:0051536,GO:1904047 WP_017175586.1 UPI00031F403F UniRef100_A0A1L8Y984,UniRef50_Q81MB3,UniRef90_A0A1L8Y984 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 100784 101575 . - . GCA_005502385.1_01555_gene GCA_005502385.1_01555 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MYQTKEQLMSDIALLIKAHDQKEFQNKLIRQEEQEIKHLTLKQVKKKNMLILLLPSLVMILISLFIYHSTSLMMIGLILLIVWFVKNKNIRPENKSITKSKGYKKAEKELKDQPDIQQHQHNIQRHQHTLTDIHHTVAASKAQQRIPKAYTHIHSLRSMFSYLYNQRADTLKEAINLYETESHQARMEGQQQQILSTVTQTSVDAKAAKYASELAASNSQASAIWAERAAHSARAANENAAEASQNASAAATHAYKARKNTEK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 100784 101575 . - . GCA_005502385.1_01555_mRNA GCA_005502385.1_01555 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MYQTKEQLMSDIALLIKAHDQKEFQNKLIRQEEQEIKHLTLKQVKKKNMLILLLPSLVMILISLFIYHSTSLMMIGLILLIVWFVKNKNIRPENKSITKSKGYKKAEKELKDQPDIQQHQHNIQRHQHTLTDIHHTVAASKAQQRIPKAYTHIHSLRSMFSYLYNQRADTLKEAINLYETESHQARMEGQQQQILSTVTQTSVDAKAAKYASELAASNSQASAIWAERAAHSARAANENAAEASQNASAAATHAYKARKNTEK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 100784 101575 . - 0 GCA_005502385.1_01555 GCA_005502385.1_01555_gene,GCA_005502385.1_01555_mRNA GCA_005502385.1_01555 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MYQTKEQLMSDIALLIKAHDQKEFQNKLIRQEEQEIKHLTLKQVKKKNMLILLLPSLVMILISLFIYHSTSLMMIGLILLIVWFVKNKNIRPENKSITKSKGYKKAEKELKDQPDIQQHQHNIQRHQHTLTDIHHTVAASKAQQRIPKAYTHIHSLRSMFSYLYNQRADTLKEAINLYETESHQARMEGQQQQILSTVTQTSVDAKAAKYASELAASNSQASAIWAERAAHSARAANENAAEASQNASAAATHAYKARKNTEK shell 263 hypothetical protein WP_017175587.1 UPI0002E80407 UniRef100_A0A8X8GTA3,UniRef50_A0A380FX68,UniRef90_A0A8X8GTA3 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 101590 102297 . - . GCA_005502385.1_01556_gene GCA_005502385.1_01556 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKFKPFLIIMSLAIFTFSLTGCSQSIEHKKDISIKDIINDKKEHFLYTVSNSNGESKVDWIYLTKAGKMKMIAFDDSLEIPPSLISKLDANEVKKTLDSKDVDYDETPYQDVKSYIELTTDNGKPLFTLLTTNNISKKDFQNDIGKAMNQSATDKDSFMFYTSVETGQSQYPTKNVEYIGTFTANPSALRGDDADDDDYKYTMIKLDNKHQKLVDLSPKDKDVTQVKFSDFNME . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 101590 102297 . - . GCA_005502385.1_01556_mRNA GCA_005502385.1_01556 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKFKPFLIIMSLAIFTFSLTGCSQSIEHKKDISIKDIINDKKEHFLYTVSNSNGESKVDWIYLTKAGKMKMIAFDDSLEIPPSLISKLDANEVKKTLDSKDVDYDETPYQDVKSYIELTTDNGKPLFTLLTTNNISKKDFQNDIGKAMNQSATDKDSFMFYTSVETGQSQYPTKNVEYIGTFTANPSALRGDDADDDDYKYTMIKLDNKHQKLVDLSPKDKDVTQVKFSDFNME . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 101590 102297 . - 0 GCA_005502385.1_01556 GCA_005502385.1_01556_gene,GCA_005502385.1_01556_mRNA GCA_005502385.1_01556 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKFKPFLIIMSLAIFTFSLTGCSQSIEHKKDISIKDIINDKKEHFLYTVSNSNGESKVDWIYLTKAGKMKMIAFDDSLEIPPSLISKLDANEVKKTLDSKDVDYDETPYQDVKSYIELTTDNGKPLFTLLTTNNISKKDFQNDIGKAMNQSATDKDSFMFYTSVETGQSQYPTKNVEYIGTFTANPSALRGDDADDDDYKYTMIKLDNKHQKLVDLSPKDKDVTQVKFSDFNME shell 235 DUF5067 domain-containing protein WP_017175588.1 UPI0002D59E8E UniRef100_A0A3S7GV16,UniRef50_A0A3S7GV16,UniRef90_A0A3S7GV16 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 102371 102868 . - . GCA_005502385.1_01557_gene GCA_005502385.1_01557 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MEQAFRVLNIYDKLLKNETVNKLELATEFNVNPRTIQRDIDNIRHYLYESTLHSDLELQIQFEQSKNSYFIKRYPKYSHQDDLRVQVTYEMTFKLYETLKMRDDIKILNKNDKTYDVQMNLNPNEAIDLCFQYHRSLRLISPDHLLKQFTVELIKLQMIYLRNEV . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 102371 102868 . - . GCA_005502385.1_01557_mRNA GCA_005502385.1_01557 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MEQAFRVLNIYDKLLKNETVNKLELATEFNVNPRTIQRDIDNIRHYLYESTLHSDLELQIQFEQSKNSYFIKRYPKYSHQDDLRVQVTYEMTFKLYETLKMRDDIKILNKNDKTYDVQMNLNPNEAIDLCFQYHRSLRLISPDHLLKQFTVELIKLQMIYLRNEV . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 102371 102868 . - 0 GCA_005502385.1_01557 GCA_005502385.1_01557_gene,GCA_005502385.1_01557_mRNA GCA_005502385.1_01557 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MEQAFRVLNIYDKLLKNETVNKLELATEFNVNPRTIQRDIDNIRHYLYESTLHSDLELQIQFEQSKNSYFIKRYPKYSHQDDLRVQVTYEMTFKLYETLKMRDDIKILNKNDKTYDVQMNLNPNEAIDLCFQYHRSLRLISPDHLLKQFTVELIKLQMIYLRNEV shell 165 HTH domain-containing protein WP_070549277.1 UPI0008A18986 UniRef100_UPI0008A18986,UniRef50_A0A974KXH6,UniRef90_A0A974KXH6 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 103033 103290 . - . GCA_005502385.1_01558_gene GCA_005502385.1_01558 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIYHEIITELNNLNETPQTIIAQYERIEFGQSCTNDETLLNCNFTKIFHKLNQNHTLRPYLKLISTNPSELIEWFILYSYVLGND . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 103033 103290 . - . GCA_005502385.1_01558_mRNA GCA_005502385.1_01558 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIYHEIITELNNLNETPQTIIAQYERIEFGQSCTNDETLLNCNFTKIFHKLNQNHTLRPYLKLISTNPSELIEWFILYSYVLGND . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 103033 103290 . - 0 GCA_005502385.1_01558 GCA_005502385.1_01558_gene,GCA_005502385.1_01558_mRNA GCA_005502385.1_01558 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIYHEIITELNNLNETPQTIIAQYERIEFGQSCTNDETLLNCNFTKIFHKLNQNHTLRPYLKLISTNPSELIEWFILYSYVLGND shell 85 hypothetical protein WP_017175590.1 UPI00036D73D8 UniRef100_A0A8X8GQV2,UniRef50_A0A8X8GQV2,UniRef90_A0A8X8GQV2 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 103698 104852 . + . GCA_005502385.1_01559_gene GCA_005502385.1_01559 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSQYVITNGRIYTEAQVIEKGYLVVENGKISDIQKGDYKGHLNQIDVAGKHVLPGFIDIHIHGGYGEDAMDASYDGLNHLAKQLLSEGTTTFLATTMTQSDENIEKALNNIVACYENQTLGEAAEIGGVHLEGPFISEHKVGAQNPKYVQRPTVEKIRHFQEVAKGLIKIITFAPEVEGAHETLNELRDDIIFSMGHTVATFEEANEAVERGAKHVTHLYNAATPFEHRNPGVFGAAWTNQSLNTEIIGDGIHSHPAAVDIAYKQKGATHMYLITDAMRAKGMKDGEYDLGGQNVIVKGKEARLENGTLAGSILKMNEGLHNLIQFTHDSLDHLWRVASLNQAIALNIDKQKGSLSIGKDADIVIVDDHIQVDTTIKSGTIHHF . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 103698 104852 . + . GCA_005502385.1_01559_mRNA GCA_005502385.1_01559 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSQYVITNGRIYTEAQVIEKGYLVVENGKISDIQKGDYKGHLNQIDVAGKHVLPGFIDIHIHGGYGEDAMDASYDGLNHLAKQLLSEGTTTFLATTMTQSDENIEKALNNIVACYENQTLGEAAEIGGVHLEGPFISEHKVGAQNPKYVQRPTVEKIRHFQEVAKGLIKIITFAPEVEGAHETLNELRDDIIFSMGHTVATFEEANEAVERGAKHVTHLYNAATPFEHRNPGVFGAAWTNQSLNTEIIGDGIHSHPAAVDIAYKQKGATHMYLITDAMRAKGMKDGEYDLGGQNVIVKGKEARLENGTLAGSILKMNEGLHNLIQFTHDSLDHLWRVASLNQAIALNIDKQKGSLSIGKDADIVIVDDHIQVDTTIKSGTIHHF . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 103698 104852 . + 0 GCA_005502385.1_01559 GCA_005502385.1_01559_gene,GCA_005502385.1_01559_mRNA GCA_005502385.1_01559 N-acetylglucosamine-6-phosphate deacetylase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSQYVITNGRIYTEAQVIEKGYLVVENGKISDIQKGDYKGHLNQIDVAGKHVLPGFIDIHIHGGYGEDAMDASYDGLNHLAKQLLSEGTTTFLATTMTQSDENIEKALNNIVACYENQTLGEAAEIGGVHLEGPFISEHKVGAQNPKYVQRPTVEKIRHFQEVAKGLIKIITFAPEVEGAHETLNELRDDIIFSMGHTVATFEEANEAVERGAKHVTHLYNAATPFEHRNPGVFGAAWTNQSLNTEIIGDGIHSHPAAVDIAYKQKGATHMYLITDAMRAKGMKDGEYDLGGQNVIVKGKEARLENGTLAGSILKMNEGLHNLIQFTHDSLDHLWRVASLNQAIALNIDKQKGSLSIGKDADIVIVDDHIQVDTTIKSGTIHHF persistent 384 nagA N-acetylglucosamine-6-phosphate deacetylase 3.5.1.25 GO:0006044,GO:0008448 WP_017175591.1 UPI0002D3D98E UniRef100_A0A3S7GVB3,UniRef50_A0A0D6G8V3,UniRef90_A0A3S7GVB3 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 104984 105226 . + . GCA_005502385.1_01560_gene GCA_005502385.1_01560 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MQNDLRFPSAKNFFTTLGWLSVIALLAVVVVNALYNSSFKSWSDISVNFTQTDLIFLITFAIIAIVCIIISLLLKLFKHP . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 104984 105226 . + . GCA_005502385.1_01560_mRNA GCA_005502385.1_01560 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MQNDLRFPSAKNFFTTLGWLSVIALLAVVVVNALYNSSFKSWSDISVNFTQTDLIFLITFAIIAIVCIIISLLLKLFKHP . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 104984 105226 . + 0 GCA_005502385.1_01560 GCA_005502385.1_01560_gene,GCA_005502385.1_01560_mRNA GCA_005502385.1_01560 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MQNDLRFPSAKNFFTTLGWLSVIALLAVVVVNALYNSSFKSWSDISVNFTQTDLIFLITFAIIAIVCIIISLLLKLFKHP persistent 80 DUF3923 domain-containing protein WP_017175592.1 UPI00030A5B46 UniRef100_A0A3S7GVP5,UniRef50_A0A2K4DUK4,UniRef90_A0A1J6EUS8 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 105278 106009 . - . GCA_005502385.1_01561_gene GCA_005502385.1_01561 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKLINLKNKSIASDYVAVELLKLIQSTPTATLGLATGNTMTEIYPRLSELLTANRVNLNDIKTFNLDEYVGLNSSHPQSYYTYMHELLFNHNEWNEDHIYIPRGDAPDLEDEAYAYEQRLFSIGQPDIQLLGIGENGHIGFNEPGTSFDSQTRVVDLTDSTIKANSIHFDTIDDVPKQAISMGLQSIMRAKRIILLAFGERKQEAIERLVNGSKTETLPASILQTHPNVDIIIDDVIFNYLNH . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 105278 106009 . - . GCA_005502385.1_01561_mRNA GCA_005502385.1_01561 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKLINLKNKSIASDYVAVELLKLIQSTPTATLGLATGNTMTEIYPRLSELLTANRVNLNDIKTFNLDEYVGLNSSHPQSYYTYMHELLFNHNEWNEDHIYIPRGDAPDLEDEAYAYEQRLFSIGQPDIQLLGIGENGHIGFNEPGTSFDSQTRVVDLTDSTIKANSIHFDTIDDVPKQAISMGLQSIMRAKRIILLAFGERKQEAIERLVNGSKTETLPASILQTHPNVDIIIDDVIFNYLNH . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 105278 106009 . - 0 GCA_005502385.1_01561 GCA_005502385.1_01561_gene,GCA_005502385.1_01561_mRNA GCA_005502385.1_01561 Glucosamine-6-phosphate deaminase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKLINLKNKSIASDYVAVELLKLIQSTPTATLGLATGNTMTEIYPRLSELLTANRVNLNDIKTFNLDEYVGLNSSHPQSYYTYMHELLFNHNEWNEDHIYIPRGDAPDLEDEAYAYEQRLFSIGQPDIQLLGIGENGHIGFNEPGTSFDSQTRVVDLTDSTIKANSIHFDTIDDVPKQAISMGLQSIMRAKRIILLAFGERKQEAIERLVNGSKTETLPASILQTHPNVDIIIDDVIFNYLNH persistent 243 Glucosamine-6-phosphate deaminase WP_029376794.1 UPI0004464092 UniRef100_A0A3S7H0T2,UniRef50_A0A3S7H0T2,UniRef90_A0A3S7H0T2 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 106031 106705 . - . GCA_005502385.1_01562_gene GCA_005502385.1_01562 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MLPQGLIVSCQALPEEPLHSSFIMSKMALAAYQGGAVGIRANSIEDIVAIRKEINLPVIGIVKRDYTNSSVFITATSKEVNELIESGCEVIALDATKQKRPKESLEELVKYIREKAPGIEIMADISTTEEAIYADQLGFDYIGTTLRGYTSYTKGHILYENDFEFLKEVLNQVNTKVIAEGNVITPEMYKKVSELGVHCTVVGGAITRPKQITERFVEAVKNHS . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 106031 106705 . - . GCA_005502385.1_01562_mRNA GCA_005502385.1_01562 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MLPQGLIVSCQALPEEPLHSSFIMSKMALAAYQGGAVGIRANSIEDIVAIRKEINLPVIGIVKRDYTNSSVFITATSKEVNELIESGCEVIALDATKQKRPKESLEELVKYIREKAPGIEIMADISTTEEAIYADQLGFDYIGTTLRGYTSYTKGHILYENDFEFLKEVLNQVNTKVIAEGNVITPEMYKKVSELGVHCTVVGGAITRPKQITERFVEAVKNHS . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 106031 106705 . - 0 GCA_005502385.1_01562 GCA_005502385.1_01562_gene,GCA_005502385.1_01562_mRNA GCA_005502385.1_01562 Putative N-acetylmannosamine-6-phosphate 2-epimerase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MLPQGLIVSCQALPEEPLHSSFIMSKMALAAYQGGAVGIRANSIEDIVAIRKEINLPVIGIVKRDYTNSSVFITATSKEVNELIESGCEVIALDATKQKRPKESLEELVKYIREKAPGIEIMADISTTEEAIYADQLGFDYIGTTLRGYTSYTKGHILYENDFEFLKEVLNQVNTKVIAEGNVITPEMYKKVSELGVHCTVVGGAITRPKQITERFVEAVKNHS persistent 224 Putative N-acetylmannosamine-6-phosphate 2-epimerase 5.1.3.9 WP_017175533.1 UPI0002EC84D8 UniRef100_A0A8X8GS53,UniRef50_A0A0F0C5H6,UniRef90_A0A8X8GS53 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 106906 107712 . + . GCA_005502385.1_01563_gene GCA_005502385.1_01563 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKFENRVQRCRHLLTKTDKRIIEYIQKHPLDDSFSTINSLAYAIETSPATITRFSNKLNYDNFQDMKFSLQHEKSEKSVENAPLVQLIHRYHQNIIQQTGEFISEEKIKRLAHNLKTCRQVNFAGLGSSGLTASEFYYRAMRMGIKGLVSTDAHQMKISASLLSSNDMFVAISNSGETSELIDAAKIARNQGAYVVVITNFEGSTITKNADLVLITSAQSNNNDSRFINSQIATHFLLDLVSYILLGDPYMHKLYQQTRQVVLNHGSK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 106906 107712 . + . GCA_005502385.1_01563_mRNA GCA_005502385.1_01563 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKFENRVQRCRHLLTKTDKRIIEYIQKHPLDDSFSTINSLAYAIETSPATITRFSNKLNYDNFQDMKFSLQHEKSEKSVENAPLVQLIHRYHQNIIQQTGEFISEEKIKRLAHNLKTCRQVNFAGLGSSGLTASEFYYRAMRMGIKGLVSTDAHQMKISASLLSSNDMFVAISNSGETSELIDAAKIARNQGAYVVVITNFEGSTITKNADLVLITSAQSNNNDSRFINSQIATHFLLDLVSYILLGDPYMHKLYQQTRQVVLNHGSK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 106906 107712 . + 0 GCA_005502385.1_01563 GCA_005502385.1_01563_gene,GCA_005502385.1_01563_mRNA GCA_005502385.1_01563 putative HTH-type transcriptional regulator YbbH GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKFENRVQRCRHLLTKTDKRIIEYIQKHPLDDSFSTINSLAYAIETSPATITRFSNKLNYDNFQDMKFSLQHEKSEKSVENAPLVQLIHRYHQNIIQQTGEFISEEKIKRLAHNLKTCRQVNFAGLGSSGLTASEFYYRAMRMGIKGLVSTDAHQMKISASLLSSNDMFVAISNSGETSELIDAAKIARNQGAYVVVITNFEGSTITKNADLVLITSAQSNNNDSRFINSQIATHFLLDLVSYILLGDPYMHKLYQQTRQVVLNHGSK persistent 268 MurR/RpiR family transcriptional regulator WP_049334876.1 UPI00066A7029 UniRef100_UPI00066A7029,UniRef50_Q2G158,UniRef90_A0A8X8GI97 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 107754 108614 . - . GCA_005502385.1_01564_gene GCA_005502385.1_01564 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MYKIAVDIGGTNIKLAVINNELNIIDYKTIATPDNIHILITNEIYLIIDAFIKKYQLKNPHIGISSAGVVDSTRGEIVYTGPTIQNFDGTNFLNVFKELSSNITVYNDVDAALLGELSLHNYEENNIFCLTLGTGIGGAFYNKSIGIYQGARHRANEIGYLLYRSSDDKTFEQRASTSALKDLMLLHHFKYDTNVPKLFELAEESDTVAINILEEWSHSVAEGIAQLQIIYDPELILIGGGISSQKDTLLKYIKPKIHYYLPPHYGIARLQTTRSGNNAALYGAIQ . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 107754 108614 . - . GCA_005502385.1_01564_mRNA GCA_005502385.1_01564 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MYKIAVDIGGTNIKLAVINNELNIIDYKTIATPDNIHILITNEIYLIIDAFIKKYQLKNPHIGISSAGVVDSTRGEIVYTGPTIQNFDGTNFLNVFKELSSNITVYNDVDAALLGELSLHNYEENNIFCLTLGTGIGGAFYNKSIGIYQGARHRANEIGYLLYRSSDDKTFEQRASTSALKDLMLLHHFKYDTNVPKLFELAEESDTVAINILEEWSHSVAEGIAQLQIIYDPELILIGGGISSQKDTLLKYIKPKIHYYLPPHYGIARLQTTRSGNNAALYGAIQ . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 107754 108614 . - 0 GCA_005502385.1_01564 GCA_005502385.1_01564_gene,GCA_005502385.1_01564_mRNA GCA_005502385.1_01564 Beta-glucoside kinase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MYKIAVDIGGTNIKLAVINNELNIIDYKTIATPDNIHILITNEIYLIIDAFIKKYQLKNPHIGISSAGVVDSTRGEIVYTGPTIQNFDGTNFLNVFKELSSNITVYNDVDAALLGELSLHNYEENNIFCLTLGTGIGGAFYNKSIGIYQGARHRANEIGYLLYRSSDDKTFEQRASTSALKDLMLLHHFKYDTNVPKLFELAEESDTVAINILEEWSHSVAEGIAQLQIIYDPELILIGGGISSQKDTLLKYIKPKIHYYLPPHYGIARLQTTRSGNNAALYGAIQ persistent 286 N-acetylmannosamine kinase WP_049382253.1 UPI00066DF127 UniRef100_UPI00066DF127,UniRef50_A0A2K4AIW7,UniRef90_A0A3S7GYH7 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 108844 109725 . + . GCA_005502385.1_01565_gene GCA_005502385.1_01565 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MEEQLKGLYAALLVPFDENGQVKEEGLKQIAKNAIEVEQLDGLYVNGSSGENFLISKEQKKQIFKVVKEAVGNDVKLIAQVGSLDLNEAIELGKYATNLGYDALSAVTPFYYPFSFEEIKQYYFDIIEATQNKMIIYAIPDLTGVNISINQFEELFDNEKIVGVKYTAPNFFLLERIRKAFPDKLILSGFDEMLVQAVISGVDGAIGSTYNVNGRRARQIYDLAREGKVEEAYKIQHDTNNIIETVLSMGIYPTLKEILKTRGIDGGVPKRPFSPFNEANRKELNQLIETYNL . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 108844 109725 . + . GCA_005502385.1_01565_mRNA GCA_005502385.1_01565 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MEEQLKGLYAALLVPFDENGQVKEEGLKQIAKNAIEVEQLDGLYVNGSSGENFLISKEQKKQIFKVVKEAVGNDVKLIAQVGSLDLNEAIELGKYATNLGYDALSAVTPFYYPFSFEEIKQYYFDIIEATQNKMIIYAIPDLTGVNISINQFEELFDNEKIVGVKYTAPNFFLLERIRKAFPDKLILSGFDEMLVQAVISGVDGAIGSTYNVNGRRARQIYDLAREGKVEEAYKIQHDTNNIIETVLSMGIYPTLKEILKTRGIDGGVPKRPFSPFNEANRKELNQLIETYNL . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 108844 109725 . + 0 GCA_005502385.1_01565 GCA_005502385.1_01565_gene,GCA_005502385.1_01565_mRNA GCA_005502385.1_01565 N-acetylneuraminate lyase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MEEQLKGLYAALLVPFDENGQVKEEGLKQIAKNAIEVEQLDGLYVNGSSGENFLISKEQKKQIFKVVKEAVGNDVKLIAQVGSLDLNEAIELGKYATNLGYDALSAVTPFYYPFSFEEIKQYYFDIIEATQNKMIIYAIPDLTGVNISINQFEELFDNEKIVGVKYTAPNFFLLERIRKAFPDKLILSGFDEMLVQAVISGVDGAIGSTYNVNGRRARQIYDLAREGKVEEAYKIQHDTNNIIETVLSMGIYPTLKEILKTRGIDGGVPKRPFSPFNEANRKELNQLIETYNL persistent 293 N-acetylneuraminate lyase 4.1.3.3 GO:0005975,GO:0008747 WP_002449422.1 UPI00019FC720 UniRef100_UPI00019FC720,UniRef50_Q2G160,UniRef90_A0A4Q9WR47 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 109772 111304 . + . GCA_005502385.1_01566_gene GCA_005502385.1_01566 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MQHIGFGLWNWIAVIVYLVAMLLVGAYFTKRASQDTDSFFKASGRLPSWAIGFSIYATTLSAITFMSTPEKAFLTDWAYIAGNIAIVAIIPILIAFYVPFFKKLHVTSAYEYLEARFGPSIRLIGSLLFIIFHLGRIAIVIYLPILAITAVSDINPYIVASLVGILCILYTFLGGFEGVVWSDFIQGVILLGGALLIIIIGAFEIKGGFGTIVHDAIANKKILSADNWKLNSAAAAIPIIFLGNIFNNLHQYTASQDVVQRYQASESMEETKKSLWTNGVLALISAPIFYGMGTMMYSFYQHQETLPKGFNTSSIVPYFILTEMPPFIGGLLIAAIFAAAQSTISSSLNSISACTSEDIKHRFFGKRDDKSEVKFARLIIVIAGLLSYGISMYLIAADSNNLWDLFLLITGLFGVPLAGIFAVGIFTRRANTFGVIVGLFAGVIIAYLLHGIGGGNSPFYVSIISFLVAFILGYIVSLLVPSKNVKDITGLTIYDKNKASTYISKIAKRN . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 109772 111304 . + . GCA_005502385.1_01566_mRNA GCA_005502385.1_01566 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MQHIGFGLWNWIAVIVYLVAMLLVGAYFTKRASQDTDSFFKASGRLPSWAIGFSIYATTLSAITFMSTPEKAFLTDWAYIAGNIAIVAIIPILIAFYVPFFKKLHVTSAYEYLEARFGPSIRLIGSLLFIIFHLGRIAIVIYLPILAITAVSDINPYIVASLVGILCILYTFLGGFEGVVWSDFIQGVILLGGALLIIIIGAFEIKGGFGTIVHDAIANKKILSADNWKLNSAAAAIPIIFLGNIFNNLHQYTASQDVVQRYQASESMEETKKSLWTNGVLALISAPIFYGMGTMMYSFYQHQETLPKGFNTSSIVPYFILTEMPPFIGGLLIAAIFAAAQSTISSSLNSISACTSEDIKHRFFGKRDDKSEVKFARLIIVIAGLLSYGISMYLIAADSNNLWDLFLLITGLFGVPLAGIFAVGIFTRRANTFGVIVGLFAGVIIAYLLHGIGGGNSPFYVSIISFLVAFILGYIVSLLVPSKNVKDITGLTIYDKNKASTYISKIAKRN . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 109772 111304 . + 0 GCA_005502385.1_01566 GCA_005502385.1_01566_gene,GCA_005502385.1_01566_mRNA GCA_005502385.1_01566 Sodium/glucose cotransporter GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MQHIGFGLWNWIAVIVYLVAMLLVGAYFTKRASQDTDSFFKASGRLPSWAIGFSIYATTLSAITFMSTPEKAFLTDWAYIAGNIAIVAIIPILIAFYVPFFKKLHVTSAYEYLEARFGPSIRLIGSLLFIIFHLGRIAIVIYLPILAITAVSDINPYIVASLVGILCILYTFLGGFEGVVWSDFIQGVILLGGALLIIIIGAFEIKGGFGTIVHDAIANKKILSADNWKLNSAAAAIPIIFLGNIFNNLHQYTASQDVVQRYQASESMEETKKSLWTNGVLALISAPIFYGMGTMMYSFYQHQETLPKGFNTSSIVPYFILTEMPPFIGGLLIAAIFAAAQSTISSSLNSISACTSEDIKHRFFGKRDDKSEVKFARLIIVIAGLLSYGISMYLIAADSNNLWDLFLLITGLFGVPLAGIFAVGIFTRRANTFGVIVGLFAGVIIAYLLHGIGGGNSPFYVSIISFLVAFILGYIVSLLVPSKNVKDITGLTIYDKNKASTYISKIAKRN persistent 510 Na+/proline symporter UniRef50_Q2G161,UniRef90_A0AAE5MYJ7 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 111412 112239 . + . GCA_005502385.1_01567_gene GCA_005502385.1_01567 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKIIKIVGMFLLAIIIMVISQTIALLFDIIIPFYGIGTILSSLTYILLTFLVVRWTITHVFKETLSSYRMTKPVFHPIYLILGIALPCVVYAIYFIFIPGDFKVHHFNSISKTIHDLSYIIFMQAAAGAIVEEMVCRGLLMGYIEKKTNIRIAIIVTSLFFGVIHLLNGALNVTSFFLLLVSGTLVGMMFGIATYRFNTIWASITLHFFWNVFQVVYITTKETDYNVFQYVLRFKNMVLTGGQFGFETSIVSTIGYIIVIIVLLMCRTPYKGSNL . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 111412 112239 . + . GCA_005502385.1_01567_mRNA GCA_005502385.1_01567 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKIIKIVGMFLLAIIIMVISQTIALLFDIIIPFYGIGTILSSLTYILLTFLVVRWTITHVFKETLSSYRMTKPVFHPIYLILGIALPCVVYAIYFIFIPGDFKVHHFNSISKTIHDLSYIIFMQAAAGAIVEEMVCRGLLMGYIEKKTNIRIAIIVTSLFFGVIHLLNGALNVTSFFLLLVSGTLVGMMFGIATYRFNTIWASITLHFFWNVFQVVYITTKETDYNVFQYVLRFKNMVLTGGQFGFETSIVSTIGYIIVIIVLLMCRTPYKGSNL . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 111412 112239 . + 0 GCA_005502385.1_01567 GCA_005502385.1_01567_gene,GCA_005502385.1_01567_mRNA GCA_005502385.1_01567 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKIIKIVGMFLLAIIIMVISQTIALLFDIIIPFYGIGTILSSLTYILLTFLVVRWTITHVFKETLSSYRMTKPVFHPIYLILGIALPCVVYAIYFIFIPGDFKVHHFNSISKTIHDLSYIIFMQAAAGAIVEEMVCRGLLMGYIEKKTNIRIAIIVTSLFFGVIHLLNGALNVTSFFLLLVSGTLVGMMFGIATYRFNTIWASITLHFFWNVFQVVYITTKETDYNVFQYVLRFKNMVLTGGQFGFETSIVSTIGYIIVIIVLLMCRTPYKGSNL persistent 275 CAAX protease WP_002449237.1 UPI00019FC71E UniRef100_UPI00019FC71E,UniRef50_A0A853V0S2,UniRef90_A0A3S7GVB2 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 112312 112998 . + . GCA_005502385.1_01568_gene GCA_005502385.1_01568 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKIVIVTLILILSIGLVGCHRLSKEESDPSDNAKTQEEHSTEENKSSDDQDISLEPDTKIPDHVFEKTSVRHVQISEKTIKKDIKTYSNIDKKINDTMNTYKMKLYSNQKLSNTEANKLKKLVQLENENDTNFAQYIQNNQMPNNDYVIYTDKISRYISTANRIEQKSLEISLKSDDDTSIFNDIEQVNKDQDIVNDQEKQDIANFLEDKNIKTETFNEDSNHIDID . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 112312 112998 . + . GCA_005502385.1_01568_mRNA GCA_005502385.1_01568 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKIVIVTLILILSIGLVGCHRLSKEESDPSDNAKTQEEHSTEENKSSDDQDISLEPDTKIPDHVFEKTSVRHVQISEKTIKKDIKTYSNIDKKINDTMNTYKMKLYSNQKLSNTEANKLKKLVQLENENDTNFAQYIQNNQMPNNDYVIYTDKISRYISTANRIEQKSLEISLKSDDDTSIFNDIEQVNKDQDIVNDQEKQDIANFLEDKNIKTETFNEDSNHIDID . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 112312 112998 . + 0 GCA_005502385.1_01568 GCA_005502385.1_01568_gene,GCA_005502385.1_01568_mRNA GCA_005502385.1_01568 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKIVIVTLILILSIGLVGCHRLSKEESDPSDNAKTQEEHSTEENKSSDDQDISLEPDTKIPDHVFEKTSVRHVQISEKTIKKDIKTYSNIDKKINDTMNTYKMKLYSNQKLSNTEANKLKKLVQLENENDTNFAQYIQNNQMPNNDYVIYTDKISRYISTANRIEQKSLEISLKSDDDTSIFNDIEQVNKDQDIVNDQEKQDIANFLEDKNIKTETFNEDSNHIDID persistent 228 NDxxF motif lipoprotein WP_002449408.1 UPI00019FC71D UniRef100_A0A8X8GR31,UniRef50_A0AAE5MYW4,UniRef90_A0AAE5MYW4 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 113103 113906 . - . GCA_005502385.1_01569_gene GCA_005502385.1_01569 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTQQGITETRMHSDSNLDSHYHKKDEHYPKGNRFLNVLIFIGWMLLAQIPIVLILFITNFSAKMDVTSGTLATLLFMLLAAVVIWLVRHYYQRHTYEPIKPFKRKDIMINIGWALLLRVIVIGMSFLMMAITGQAQTENDKALLGNFQGAKPSPDQLGQAFPVIVFALTLTFVAPYLEELIYRGIFKETLFKRSSFWLPFILSSLIFASQHGISNWVAVLMYIIMGMVFYLAYHRRHNVRDSMMVHMIHNGVTGIVIIVSYFIAMFS . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 113103 113906 . - . GCA_005502385.1_01569_mRNA GCA_005502385.1_01569 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTQQGITETRMHSDSNLDSHYHKKDEHYPKGNRFLNVLIFIGWMLLAQIPIVLILFITNFSAKMDVTSGTLATLLFMLLAAVVIWLVRHYYQRHTYEPIKPFKRKDIMINIGWALLLRVIVIGMSFLMMAITGQAQTENDKALLGNFQGAKPSPDQLGQAFPVIVFALTLTFVAPYLEELIYRGIFKETLFKRSSFWLPFILSSLIFASQHGISNWVAVLMYIIMGMVFYLAYHRRHNVRDSMMVHMIHNGVTGIVIIVSYFIAMFS . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 113103 113906 . - 0 GCA_005502385.1_01569 GCA_005502385.1_01569_gene,GCA_005502385.1_01569_mRNA GCA_005502385.1_01569 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTQQGITETRMHSDSNLDSHYHKKDEHYPKGNRFLNVLIFIGWMLLAQIPIVLILFITNFSAKMDVTSGTLATLLFMLLAAVVIWLVRHYYQRHTYEPIKPFKRKDIMINIGWALLLRVIVIGMSFLMMAITGQAQTENDKALLGNFQGAKPSPDQLGQAFPVIVFALTLTFVAPYLEELIYRGIFKETLFKRSSFWLPFILSSLIFASQHGISNWVAVLMYIIMGMVFYLAYHRRHNVRDSMMVHMIHNGVTGIVIIVSYFIAMFS persistent 267 CPBP family intramembrane metalloprotease UniRef50_A0A533ITZ5,UniRef90_A0A533ITZ5 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 114061 114687 . - . GCA_005502385.1_01570_gene GCA_005502385.1_01570 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MLQIKQLNKAFSNKQIFKNFNYTLETHDHLLISGVSGSGKSTLAQIIAGLDSNYQGTLIYNDLELGHISQHKWMKHIQYVPQYHSSTLDPNKTVHWILKQPLIHFHYPKAIHEDRIKEVMSQCKLESQLLGKKVSTLSGGQFQRLWIAKALLVEPDVLILDEATTNLDMVNEDIILQMLREFQHLQLIIITHDSYLLKALPGKHLNIG . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 114061 114687 . - . GCA_005502385.1_01570_mRNA GCA_005502385.1_01570 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MLQIKQLNKAFSNKQIFKNFNYTLETHDHLLISGVSGSGKSTLAQIIAGLDSNYQGTLIYNDLELGHISQHKWMKHIQYVPQYHSSTLDPNKTVHWILKQPLIHFHYPKAIHEDRIKEVMSQCKLESQLLGKKVSTLSGGQFQRLWIAKALLVEPDVLILDEATTNLDMVNEDIILQMLREFQHLQLIIITHDSYLLKALPGKHLNIG . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 114061 114687 . - 0 GCA_005502385.1_01570 GCA_005502385.1_01570_gene,GCA_005502385.1_01570_mRNA GCA_005502385.1_01570 Nickel import ATP-binding protein NikE GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MLQIKQLNKAFSNKQIFKNFNYTLETHDHLLISGVSGSGKSTLAQIIAGLDSNYQGTLIYNDLELGHISQHKWMKHIQYVPQYHSSTLDPNKTVHWILKQPLIHFHYPKAIHEDRIKEVMSQCKLESQLLGKKVSTLSGGQFQRLWIAKALLVEPDVLILDEATTNLDMVNEDIILQMLREFQHLQLIIITHDSYLLKALPGKHLNIG persistent 208 ATP-binding cassette domain-containing protein WP_002449241.1 UPI00019FC71B UniRef100_A0A4V2KX60,UniRef50_A0A380FXX1,UniRef90_A0A4V2KX60 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 114674 115447 . - . GCA_005502385.1_01571_gene GCA_005502385.1_01571 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSNTQSSSPTLDTVLYINDVSVYHKHEPLLKQIHLKIEKGSFHCLIGESGSGKSLLTRTVLNMKEDDLTYRGEIHLDLTQTDAMFQDANRNFFQNVRIKRHFDALFDSMSSSLTRDQQKAFVLRQFKHLGLDQPESIYYQYPFELSGGMAQRVALVMAIVKEAQFLIADEPTSALDQHNRQSLMALLHHVVTEHDMTVLFVTHDLNLVLNYATHISVMLNGDIVETGRASDILHHPQHTYTKQLIELANRRYQYVTD . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 114674 115447 . - . GCA_005502385.1_01571_mRNA GCA_005502385.1_01571 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSNTQSSSPTLDTVLYINDVSVYHKHEPLLKQIHLKIEKGSFHCLIGESGSGKSLLTRTVLNMKEDDLTYRGEIHLDLTQTDAMFQDANRNFFQNVRIKRHFDALFDSMSSSLTRDQQKAFVLRQFKHLGLDQPESIYYQYPFELSGGMAQRVALVMAIVKEAQFLIADEPTSALDQHNRQSLMALLHHVVTEHDMTVLFVTHDLNLVLNYATHISVMLNGDIVETGRASDILHHPQHTYTKQLIELANRRYQYVTD . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 114674 115447 . - 0 GCA_005502385.1_01571 GCA_005502385.1_01571_gene,GCA_005502385.1_01571_mRNA GCA_005502385.1_01571 Metal-staphylopine import system ATP-binding protein CntD GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSNTQSSSPTLDTVLYINDVSVYHKHEPLLKQIHLKIEKGSFHCLIGESGSGKSLLTRTVLNMKEDDLTYRGEIHLDLTQTDAMFQDANRNFFQNVRIKRHFDALFDSMSSSLTRDQQKAFVLRQFKHLGLDQPESIYYQYPFELSGGMAQRVALVMAIVKEAQFLIADEPTSALDQHNRQSLMALLHHVVTEHDMTVLFVTHDLNLVLNYATHISVMLNGDIVETGRASDILHHPQHTYTKQLIELANRRYQYVTD persistent 257 ABC transporter ATP-binding protein UniRef50_A0A380FXR3,UniRef90_A0A657M619 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 115414 116181 . - . GCA_005502385.1_01572_gene GCA_005502385.1_01572 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKIKHFIWPIAIIILAVLAYALYDKANQIHQSQALRPPSLHHLLGTDDLGRDFLTRLFVGSLITLGLTAFIMIGTIVLGLIIGLISAIVGKWLDSIIMALADMLIALPAIIIALVVLGFINNSVVGLCLALIIGWLGRYLRYFRNLARDTMTQPFVKFAPLSGMSKFQVTIHHIVPHLISDIMALVTADFGKLMLSISGLAFIGLGVKPPIPELGAILHDGKSYFYSAPWLFIFPGVLLGGFALICQILNRRHLH . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 115414 116181 . - . GCA_005502385.1_01572_mRNA GCA_005502385.1_01572 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKIKHFIWPIAIIILAVLAYALYDKANQIHQSQALRPPSLHHLLGTDDLGRDFLTRLFVGSLITLGLTAFIMIGTIVLGLIIGLISAIVGKWLDSIIMALADMLIALPAIIIALVVLGFINNSVVGLCLALIIGWLGRYLRYFRNLARDTMTQPFVKFAPLSGMSKFQVTIHHIVPHLISDIMALVTADFGKLMLSISGLAFIGLGVKPPIPELGAILHDGKSYFYSAPWLFIFPGVLLGGFALICQILNRRHLH . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 115414 116181 . - 0 GCA_005502385.1_01572 GCA_005502385.1_01572_gene,GCA_005502385.1_01572_mRNA GCA_005502385.1_01572 Nickel import system permease protein NikC GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKIKHFIWPIAIIILAVLAYALYDKANQIHQSQALRPPSLHHLLGTDDLGRDFLTRLFVGSLITLGLTAFIMIGTIVLGLIIGLISAIVGKWLDSIIMALADMLIALPAIIIALVVLGFINNSVVGLCLALIIGWLGRYLRYFRNLARDTMTQPFVKFAPLSGMSKFQVTIHHIVPHLISDIMALVTADFGKLMLSISGLAFIGLGVKPPIPELGAILHDGKSYFYSAPWLFIFPGVLLGGFALICQILNRRHLH persistent 255 ABC transmembrane type-1 domain-containing protein WP_002449346.1 UPI00019FC719 UniRef100_A0A8X8GIN8,UniRef50_A0A853V2J3,UniRef90_A0A974KXL6 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 116171 117130 . - . GCA_005502385.1_01573_gene GCA_005502385.1_01573 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MISMIKHLLKLILYFIIISFILFVLLEHTTGNPAIQYLHEHGVAQITDERIKMAQDKLGLSQALPIRYLQWLGHAFTGDLGTSFSNGEPVTDRIAKAVAPTLKLIFISAIILFPLGYIIGYLCGNYPKKKWSIFILRASQVVTSLPEYWLAIIFIYYFGVKWHLLPFVGSYSFEYFILPIAILVLVEGSHMVLLSSHLFERTLRNEAYQLASLRQFKLKDRIYVQVKDILAPLLTITINNFIRLFSRVIILEVIFSISGLGKLLIISINLRDYPLILGILMMMITIIMILNFLGDILLEKSDPRLNMSKTLGGRVTYED . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 116171 117130 . - . GCA_005502385.1_01573_mRNA GCA_005502385.1_01573 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MISMIKHLLKLILYFIIISFILFVLLEHTTGNPAIQYLHEHGVAQITDERIKMAQDKLGLSQALPIRYLQWLGHAFTGDLGTSFSNGEPVTDRIAKAVAPTLKLIFISAIILFPLGYIIGYLCGNYPKKKWSIFILRASQVVTSLPEYWLAIIFIYYFGVKWHLLPFVGSYSFEYFILPIAILVLVEGSHMVLLSSHLFERTLRNEAYQLASLRQFKLKDRIYVQVKDILAPLLTITINNFIRLFSRVIILEVIFSISGLGKLLIISINLRDYPLILGILMMMITIIMILNFLGDILLEKSDPRLNMSKTLGGRVTYED . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 116171 117130 . - 0 GCA_005502385.1_01573 GCA_005502385.1_01573_gene,GCA_005502385.1_01573_mRNA GCA_005502385.1_01573 Metal-staphylopine import system permease protein CntB GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MISMIKHLLKLILYFIIISFILFVLLEHTTGNPAIQYLHEHGVAQITDERIKMAQDKLGLSQALPIRYLQWLGHAFTGDLGTSFSNGEPVTDRIAKAVAPTLKLIFISAIILFPLGYIIGYLCGNYPKKKWSIFILRASQVVTSLPEYWLAIIFIYYFGVKWHLLPFVGSYSFEYFILPIAILVLVEGSHMVLLSSHLFERTLRNEAYQLASLRQFKLKDRIYVQVKDILAPLLTITINNFIRLFSRVIILEVIFSISGLGKLLIISINLRDYPLILGILMMMITIIMILNFLGDILLEKSDPRLNMSKTLGGRVTYED persistent 319 ABC transporter permease WP_002449445.1 UPI00019FC718 UniRef100_UPI00019FC718,UniRef50_A0A380FVK1,UniRef90_A0A3S7GVR3 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 117123 118685 . - . GCA_005502385.1_01574_gene GCA_005502385.1_01574 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MRKHLLLSFMMCASLLLTGCTHDQHQHKEVKVSLAREFNPSQLDAQAFDVPMPVYSAIYQPLVTYGENGKIEPGLAKSWEVSNNGKDYTFHLKHNIKFNDGSTFNAKAVKFSIERAKATNKTNPMETLDKLKSVTLKDNYTVDFHLKTPSNQVLNELSQVRPLRIMSPNAVKDGKTTGQFEKAIGTGPFKVANSTNETVSFKPNPYYRNHHPLDYDLIFQTIEDSDSRHLAIESHSIDITGGSLGHLTPQQIKESYRNQDLKVKQYPSTETQFMAFNPEVSLLQNKKMREVISKAINTDHLSSNKQLKGLFQDGVEFVNDTNQHTHSYNPTQATRLLEQLGYKKNDRGYFEKNGRDLSLKLALQTDEFPEWKTKAEIMQQDLKNVGIHLDINVLDAQTYYETLTIRKDYDLIFYRSYTNALMPYNFLNARFKQDGDKPGMFANDVQLTTMLNRFSTITNKDDQQRAFNHISHRINQQYLEVPIAYPNEVFVTSPKIKQFEFSGQTDAPINYDKLKVSHHD . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 117123 118685 . - . GCA_005502385.1_01574_mRNA GCA_005502385.1_01574 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MRKHLLLSFMMCASLLLTGCTHDQHQHKEVKVSLAREFNPSQLDAQAFDVPMPVYSAIYQPLVTYGENGKIEPGLAKSWEVSNNGKDYTFHLKHNIKFNDGSTFNAKAVKFSIERAKATNKTNPMETLDKLKSVTLKDNYTVDFHLKTPSNQVLNELSQVRPLRIMSPNAVKDGKTTGQFEKAIGTGPFKVANSTNETVSFKPNPYYRNHHPLDYDLIFQTIEDSDSRHLAIESHSIDITGGSLGHLTPQQIKESYRNQDLKVKQYPSTETQFMAFNPEVSLLQNKKMREVISKAINTDHLSSNKQLKGLFQDGVEFVNDTNQHTHSYNPTQATRLLEQLGYKKNDRGYFEKNGRDLSLKLALQTDEFPEWKTKAEIMQQDLKNVGIHLDINVLDAQTYYETLTIRKDYDLIFYRSYTNALMPYNFLNARFKQDGDKPGMFANDVQLTTMLNRFSTITNKDDQQRAFNHISHRINQQYLEVPIAYPNEVFVTSPKIKQFEFSGQTDAPINYDKLKVSHHD . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 117123 118685 . - 0 GCA_005502385.1_01574 GCA_005502385.1_01574_gene,GCA_005502385.1_01574_mRNA GCA_005502385.1_01574 Metal-staphylopine-binding protein CntA GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MRKHLLLSFMMCASLLLTGCTHDQHQHKEVKVSLAREFNPSQLDAQAFDVPMPVYSAIYQPLVTYGENGKIEPGLAKSWEVSNNGKDYTFHLKHNIKFNDGSTFNAKAVKFSIERAKATNKTNPMETLDKLKSVTLKDNYTVDFHLKTPSNQVLNELSQVRPLRIMSPNAVKDGKTTGQFEKAIGTGPFKVANSTNETVSFKPNPYYRNHHPLDYDLIFQTIEDSDSRHLAIESHSIDITGGSLGHLTPQQIKESYRNQDLKVKQYPSTETQFMAFNPEVSLLQNKKMREVISKAINTDHLSSNKQLKGLFQDGVEFVNDTNQHTHSYNPTQATRLLEQLGYKKNDRGYFEKNGRDLSLKLALQTDEFPEWKTKAEIMQQDLKNVGIHLDINVLDAQTYYETLTIRKDYDLIFYRSYTNALMPYNFLNARFKQDGDKPGMFANDVQLTTMLNRFSTITNKDDQQRAFNHISHRINQQYLEVPIAYPNEVFVTSPKIKQFEFSGQTDAPINYDKLKVSHHD persistent 520 Nickel ABC transporter substrate-binding protein WP_170999977.1 UPI001485AB7D UniRef100_UPI001485AB7D,UniRef50_A0A5B2Z578,UniRef90_A0A3S7GYI4 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 118847 119485 . - . GCA_005502385.1_01575_gene GCA_005502385.1_01575 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNILVTAFDPFGGEKVNPALEAVRQLDPTIGAHTITTLEIPTVFHKSKDVIQHELEHHHYDVVLSIGQAGGRFNITPERVGINIDDARIADNKGNQPIDVAIHPDGAPAYFSNLPIKSMTEAIKKAGVPASLSNTAGTFVCNHVLYQLGYLADKFYPNLRFGFIHVPFIPEQVIDKPNTPSLSLDTITKGITAAINAISDLPDVKVALGETH . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 118847 119485 . - . GCA_005502385.1_01575_mRNA GCA_005502385.1_01575 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNILVTAFDPFGGEKVNPALEAVRQLDPTIGAHTITTLEIPTVFHKSKDVIQHELEHHHYDVVLSIGQAGGRFNITPERVGINIDDARIADNKGNQPIDVAIHPDGAPAYFSNLPIKSMTEAIKKAGVPASLSNTAGTFVCNHVLYQLGYLADKFYPNLRFGFIHVPFIPEQVIDKPNTPSLSLDTITKGITAAINAISDLPDVKVALGETH . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 118847 119485 . - 0 GCA_005502385.1_01575 GCA_005502385.1_01575_gene,GCA_005502385.1_01575_mRNA GCA_005502385.1_01575 Pyrrolidone-carboxylate peptidase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNILVTAFDPFGGEKVNPALEAVRQLDPTIGAHTITTLEIPTVFHKSKDVIQHELEHHHYDVVLSIGQAGGRFNITPERVGINIDDARIADNKGNQPIDVAIHPDGAPAYFSNLPIKSMTEAIKKAGVPASLSNTAGTFVCNHVLYQLGYLADKFYPNLRFGFIHVPFIPEQVIDKPNTPSLSLDTITKGITAAINAISDLPDVKVALGETH persistent 212 pcp pyroglutamyl-peptidase I 3.4.19.3 GO:0005829,GO:0006508,GO:0008234,GO:0016920 WP_064207145.1 UPI0007D900B0 UniRef100_A0A8I1BDH7,UniRef50_Q53596,UniRef90_A0A8I1BDH7 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 119668 120441 . + . GCA_005502385.1_01576_gene GCA_005502385.1_01576 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTKTAVITGSAAGLGKGIAQRLANDGFNIVIQDINQKALEKTEQEFKENGYNVVAFHSDVSKKKEQEELVQFAVAEFGQIDVFVNNAGVDAVSPILDITEDELDKLFHINVYGTLFGIQAAAKQFIKQNSKGKIINACSIAGHESYEVLGTYCATKHSVRSLTQTAAKELAEKGITVNAYCPGVAKTEMWDRIDAEMVKLDSNLKPGEAFEQFSSAIKLGRYQEPQDVASLVSFLASSDSDYITGQAILTDGGLVYR . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 119668 120441 . + . GCA_005502385.1_01576_mRNA GCA_005502385.1_01576 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTKTAVITGSAAGLGKGIAQRLANDGFNIVIQDINQKALEKTEQEFKENGYNVVAFHSDVSKKKEQEELVQFAVAEFGQIDVFVNNAGVDAVSPILDITEDELDKLFHINVYGTLFGIQAAAKQFIKQNSKGKIINACSIAGHESYEVLGTYCATKHSVRSLTQTAAKELAEKGITVNAYCPGVAKTEMWDRIDAEMVKLDSNLKPGEAFEQFSSAIKLGRYQEPQDVASLVSFLASSDSDYITGQAILTDGGLVYR . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 119668 120441 . + 0 GCA_005502385.1_01576 GCA_005502385.1_01576_gene,GCA_005502385.1_01576_mRNA GCA_005502385.1_01576 Diacetyl reductase [(S)-acetoin forming] GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTKTAVITGSAAGLGKGIAQRLANDGFNIVIQDINQKALEKTEQEFKENGYNVVAFHSDVSKKKEQEELVQFAVAEFGQIDVFVNNAGVDAVSPILDITEDELDKLFHINVYGTLFGIQAAAKQFIKQNSKGKIINACSIAGHESYEVLGTYCATKHSVRSLTQTAAKELAEKGITVNAYCPGVAKTEMWDRIDAEMVKLDSNLKPGEAFEQFSSAIKLGRYQEPQDVASLVSFLASSDSDYITGQAILTDGGLVYR persistent 257 Diacetyl reductase [(S)-acetoin forming] WP_002449443.1 UPI00019FC714 UniRef100_A0A4V2KXT5,UniRef50_Q8CQD2,UniRef90_A0A380FW70 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 120527 121504 . - . GCA_005502385.1_01577_gene GCA_005502385.1_01577 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MCTGITFRASNGDVIFGRTMDYDYPLNGFPAVQPRGYSFKSHVDYKGKTLYAFAGAGSDMEGFVFGDGVNEHGLAMSNQYDRGYASYATDIRDGYINISQTEVLVWALGYNRNIEELIENAKHVNVVAYSYSDINEVPPLHYHLSDASGRTVEVTFVEGRIVVIDNPIGVLTNNPDLNWHYENLKHYMHVTPYKIDNTFSKQFNLGNMNGTFGLPGGYTSGERFVRAAYLVHHLLPDSDDHPILDAFRILDHVSVPKGAVRPSDNGFYYTLYQTVFNLTTKTLYIKYYDSNTITELQLTDDLINRDDLVVFSRKNKGLYTEKVNG . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 120527 121504 . - . GCA_005502385.1_01577_mRNA GCA_005502385.1_01577 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MCTGITFRASNGDVIFGRTMDYDYPLNGFPAVQPRGYSFKSHVDYKGKTLYAFAGAGSDMEGFVFGDGVNEHGLAMSNQYDRGYASYATDIRDGYINISQTEVLVWALGYNRNIEELIENAKHVNVVAYSYSDINEVPPLHYHLSDASGRTVEVTFVEGRIVVIDNPIGVLTNNPDLNWHYENLKHYMHVTPYKIDNTFSKQFNLGNMNGTFGLPGGYTSGERFVRAAYLVHHLLPDSDDHPILDAFRILDHVSVPKGAVRPSDNGFYYTLYQTVFNLTTKTLYIKYYDSNTITELQLTDDLINRDDLVVFSRKNKGLYTEKVNG . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 120527 121504 . - 0 GCA_005502385.1_01577 GCA_005502385.1_01577_gene,GCA_005502385.1_01577_mRNA GCA_005502385.1_01577 putative protein YxeI GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MCTGITFRASNGDVIFGRTMDYDYPLNGFPAVQPRGYSFKSHVDYKGKTLYAFAGAGSDMEGFVFGDGVNEHGLAMSNQYDRGYASYATDIRDGYINISQTEVLVWALGYNRNIEELIENAKHVNVVAYSYSDINEVPPLHYHLSDASGRTVEVTFVEGRIVVIDNPIGVLTNNPDLNWHYENLKHYMHVTPYKIDNTFSKQFNLGNMNGTFGLPGGYTSGERFVRAAYLVHHLLPDSDDHPILDAFRILDHVSVPKGAVRPSDNGFYYTLYQTVFNLTTKTLYIKYYDSNTITELQLTDDLINRDDLVVFSRKNKGLYTEKVNG persistent 325 Choloylglycine hydrolase family protein WP_061815496.1 UPI0007654635 UniRef100_UPI0007654635,UniRef50_Q2G198,UniRef90_A0A4Q9WQ59 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 121524 122714 . - . GCA_005502385.1_01578_gene GCA_005502385.1_01578 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKHSKDYFHLFYSQLFANTGDVLIVVGLISVVYSITSKTTAASMIPIIFTSGLFVSSFISNYIYQYFTQKQVLWIFQGLKLVSLSIIASLLIFEESPIFIFILLFINALFDGFTNPIKNAMIPFIEKKEYITSANALMNMMSSIVQLSTWALGGFLMSLIGAKYLFLFALVLEILSYFFIIQLSERHIYNNEKENILNSFKTVLHHNYSNKLSLYLNLSTIFESVATSIWVAAIILTYTRTFLHVDDFWFGLINAAFFSGTIIAGLWINGKDQFFTKISYPVIIYIPLILAFINVSFILHKSVLLALLISLLMGIFEDSRYISLNSVVQREVPKEILTSTYILNNLLSSVFFSLGTLGISLVVDNQGVMWAYVISGVAYVLTFILGLYFKIAIKN . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 121524 122714 . - . GCA_005502385.1_01578_mRNA GCA_005502385.1_01578 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKHSKDYFHLFYSQLFANTGDVLIVVGLISVVYSITSKTTAASMIPIIFTSGLFVSSFISNYIYQYFTQKQVLWIFQGLKLVSLSIIASLLIFEESPIFIFILLFINALFDGFTNPIKNAMIPFIEKKEYITSANALMNMMSSIVQLSTWALGGFLMSLIGAKYLFLFALVLEILSYFFIIQLSERHIYNNEKENILNSFKTVLHHNYSNKLSLYLNLSTIFESVATSIWVAAIILTYTRTFLHVDDFWFGLINAAFFSGTIIAGLWINGKDQFFTKISYPVIIYIPLILAFINVSFILHKSVLLALLISLLMGIFEDSRYISLNSVVQREVPKEILTSTYILNNLLSSVFFSLGTLGISLVVDNQGVMWAYVISGVAYVLTFILGLYFKIAIKN . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 121524 122714 . - 0 GCA_005502385.1_01578 GCA_005502385.1_01578_gene,GCA_005502385.1_01578_mRNA GCA_005502385.1_01578 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKHSKDYFHLFYSQLFANTGDVLIVVGLISVVYSITSKTTAASMIPIIFTSGLFVSSFISNYIYQYFTQKQVLWIFQGLKLVSLSIIASLLIFEESPIFIFILLFINALFDGFTNPIKNAMIPFIEKKEYITSANALMNMMSSIVQLSTWALGGFLMSLIGAKYLFLFALVLEILSYFFIIQLSERHIYNNEKENILNSFKTVLHHNYSNKLSLYLNLSTIFESVATSIWVAAIILTYTRTFLHVDDFWFGLINAAFFSGTIIAGLWINGKDQFFTKISYPVIIYIPLILAFINVSFILHKSVLLALLISLLMGIFEDSRYISLNSVVQREVPKEILTSTYILNNLLSSVFFSLGTLGISLVVDNQGVMWAYVISGVAYVLTFILGLYFKIAIKN persistent 396 MFS transporter UniRef50_A0A640N329,UniRef90_A0A8I1BF56 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 122817 123779 . - . GCA_005502385.1_01579_gene GCA_005502385.1_01579 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDYRVLLYYKYTTIDDPDTFATEHLAFCKEHNLKGRILVSTEGINGTLSGTKEDTDKYIEHMHADERFKDMTFKIDETEGHAFKKMHVRPRKEIVALGLEDDVDPRVTTGKYYSPSEFKAALEDDDTVILDARNDYEFDLGHFRGAIRPDITRFRDLPDWIRENKEKLDGKNIVTYCTGGIRCEKFSGWLVKEGFENVGQLHGGIATYGKDPETKGEYWDGKMYVFDERISVDVNHVDKTVIGKEHFDGTPCERYINCANPECNKQILVSEENEAKYLGACSYDCAKHKRNRYVAKHHISDEEWNRRLENFKDVPEHIHA . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 122817 123779 . - . GCA_005502385.1_01579_mRNA GCA_005502385.1_01579 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDYRVLLYYKYTTIDDPDTFATEHLAFCKEHNLKGRILVSTEGINGTLSGTKEDTDKYIEHMHADERFKDMTFKIDETEGHAFKKMHVRPRKEIVALGLEDDVDPRVTTGKYYSPSEFKAALEDDDTVILDARNDYEFDLGHFRGAIRPDITRFRDLPDWIRENKEKLDGKNIVTYCTGGIRCEKFSGWLVKEGFENVGQLHGGIATYGKDPETKGEYWDGKMYVFDERISVDVNHVDKTVIGKEHFDGTPCERYINCANPECNKQILVSEENEAKYLGACSYDCAKHKRNRYVAKHHISDEEWNRRLENFKDVPEHIHA . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 122817 123779 . - 0 GCA_005502385.1_01579 GCA_005502385.1_01579_gene,GCA_005502385.1_01579_mRNA GCA_005502385.1_01579 hypothetical protein UPF0176 protein SP_0095 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDYRVLLYYKYTTIDDPDTFATEHLAFCKEHNLKGRILVSTEGINGTLSGTKEDTDKYIEHMHADERFKDMTFKIDETEGHAFKKMHVRPRKEIVALGLEDDVDPRVTTGKYYSPSEFKAALEDDDTVILDARNDYEFDLGHFRGAIRPDITRFRDLPDWIRENKEKLDGKNIVTYCTGGIRCEKFSGWLVKEGFENVGQLHGGIATYGKDPETKGEYWDGKMYVFDERISVDVNHVDKTVIGKEHFDGTPCERYINCANPECNKQILVSEENEAKYLGACSYDCAKHKRNRYVAKHHISDEEWNRRLENFKDVPEHIHA persistent 320 trhO rhodanese-related sulfurtransferase 1.14.-.- GO:0006400,GO:0016705 COG1054,J WP_017175522.1 UPI0003003AA7 UniRef100_A0A8X8GPE0,UniRef50_Q2NIJ6,UniRef90_Q4L9R7 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 124039 125019 . + . GCA_005502385.1_01580_gene GCA_005502385.1_01580 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MLDNKLPKLTYSGKSKSVVPIVSESELQTVTAEPWLEISDEGLQLEGLIFDREHNLFLCEVFGGKIFKVNLPSKDISVAFQSEKQNPAAVKIHKDGRLFTCYLGDFESTGGIFATDEHGEHFEDIISEINTDYCIDDMVFDSKGGFYFTDFRGYSTNPKGGVYYVSPDFKTVTPVIQNISVANGIALSTDEKVLWITETTTNRLHRIQLEDDGVTIAPFGATIPYYFTGHEGPDSVCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILMPGRDEGKMLRSTHPQFIPGTNQLLICTNDIENNSEGGSMIYTVEGFAKGHESYQFQS . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 124039 125019 . + . GCA_005502385.1_01580_mRNA GCA_005502385.1_01580 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MLDNKLPKLTYSGKSKSVVPIVSESELQTVTAEPWLEISDEGLQLEGLIFDREHNLFLCEVFGGKIFKVNLPSKDISVAFQSEKQNPAAVKIHKDGRLFTCYLGDFESTGGIFATDEHGEHFEDIISEINTDYCIDDMVFDSKGGFYFTDFRGYSTNPKGGVYYVSPDFKTVTPVIQNISVANGIALSTDEKVLWITETTTNRLHRIQLEDDGVTIAPFGATIPYYFTGHEGPDSVCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILMPGRDEGKMLRSTHPQFIPGTNQLLICTNDIENNSEGGSMIYTVEGFAKGHESYQFQS . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 124039 125019 . + 0 GCA_005502385.1_01580 GCA_005502385.1_01580_gene,GCA_005502385.1_01580_mRNA GCA_005502385.1_01580 Lactonase drp35 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MLDNKLPKLTYSGKSKSVVPIVSESELQTVTAEPWLEISDEGLQLEGLIFDREHNLFLCEVFGGKIFKVNLPSKDISVAFQSEKQNPAAVKIHKDGRLFTCYLGDFESTGGIFATDEHGEHFEDIISEINTDYCIDDMVFDSKGGFYFTDFRGYSTNPKGGVYYVSPDFKTVTPVIQNISVANGIALSTDEKVLWITETTTNRLHRIQLEDDGVTIAPFGATIPYYFTGHEGPDSVCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILMPGRDEGKMLRSTHPQFIPGTNQLLICTNDIENNSEGGSMIYTVEGFAKGHESYQFQS persistent 326 drp35 Lactonase drp35 3.1.1.- GO:0005737,GO:0016787,GO:0046872 COG3386,G WP_048683302.1 UPI000660C653 UniRef100_UPI000660C653,UniRef50_Q9S0S3,UniRef90_Q4L9R6 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 125198 126844 . + . GCA_005502385.1_01581_gene GCA_005502385.1_01581 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKDNWITHKADSLVGTFYDQQSYQFQQEGFETTLSFGTAGIRGQFGLGPGRLNRYTIQRLALGIAYYLQDNMAQPSIVIHYDIRHLSAEFADIIAHILATHHIKVYLSDTYQTTPQLSYAVRFLQTSAGIMITASHNPKDYNGIKVYGADGAQLDDIASLEVANYIEQLDDPLHLEIELNEALIKENILPLPEEINKYYFSEISQLIGDIPPSNLNVVYTSLHGTGTPIIPKVLSHLHFNNIELVDSQCKIDPDFSSVKSANPEEHEAFDLAIKQAQYSKADLIIATDPDVDRMGFVERDHDGHIHYFNGSEIGALMIKYLVDHTTLPKYPVMIQSIVSGELGKRFAKQHGVTVKEVLIGFKFIAKAIRELNNDEAFIFAYEESYGYLAGDFVRDKDAIQIVPLVIKYASILKNEGKTLRDALTDIYEEIGYYCDQPISKVFEGQKGQQEIATLMEHLRQHIPDTLGGLKVIAVEDYQSQKRINKRDDKIETISLPKSNVIRLIFDEGFVALRPSGTEPKLKFYLSLNVDDFEQVSHDIYQYIFNDNK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 125198 126844 . + . GCA_005502385.1_01581_mRNA GCA_005502385.1_01581 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKDNWITHKADSLVGTFYDQQSYQFQQEGFETTLSFGTAGIRGQFGLGPGRLNRYTIQRLALGIAYYLQDNMAQPSIVIHYDIRHLSAEFADIIAHILATHHIKVYLSDTYQTTPQLSYAVRFLQTSAGIMITASHNPKDYNGIKVYGADGAQLDDIASLEVANYIEQLDDPLHLEIELNEALIKENILPLPEEINKYYFSEISQLIGDIPPSNLNVVYTSLHGTGTPIIPKVLSHLHFNNIELVDSQCKIDPDFSSVKSANPEEHEAFDLAIKQAQYSKADLIIATDPDVDRMGFVERDHDGHIHYFNGSEIGALMIKYLVDHTTLPKYPVMIQSIVSGELGKRFAKQHGVTVKEVLIGFKFIAKAIRELNNDEAFIFAYEESYGYLAGDFVRDKDAIQIVPLVIKYASILKNEGKTLRDALTDIYEEIGYYCDQPISKVFEGQKGQQEIATLMEHLRQHIPDTLGGLKVIAVEDYQSQKRINKRDDKIETISLPKSNVIRLIFDEGFVALRPSGTEPKLKFYLSLNVDDFEQVSHDIYQYIFNDNK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 125198 126844 . + 0 GCA_005502385.1_01581 GCA_005502385.1_01581_gene,GCA_005502385.1_01581_mRNA GCA_005502385.1_01581 Phosphoglucomutase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKDNWITHKADSLVGTFYDQQSYQFQQEGFETTLSFGTAGIRGQFGLGPGRLNRYTIQRLALGIAYYLQDNMAQPSIVIHYDIRHLSAEFADIIAHILATHHIKVYLSDTYQTTPQLSYAVRFLQTSAGIMITASHNPKDYNGIKVYGADGAQLDDIASLEVANYIEQLDDPLHLEIELNEALIKENILPLPEEINKYYFSEISQLIGDIPPSNLNVVYTSLHGTGTPIIPKVLSHLHFNNIELVDSQCKIDPDFSSVKSANPEEHEAFDLAIKQAQYSKADLIIATDPDVDRMGFVERDHDGHIHYFNGSEIGALMIKYLVDHTTLPKYPVMIQSIVSGELGKRFAKQHGVTVKEVLIGFKFIAKAIRELNNDEAFIFAYEESYGYLAGDFVRDKDAIQIVPLVIKYASILKNEGKTLRDALTDIYEEIGYYCDQPISKVFEGQKGQQEIATLMEHLRQHIPDTLGGLKVIAVEDYQSQKRINKRDDKIETISLPKSNVIRLIFDEGFVALRPSGTEPKLKFYLSLNVDDFEQVSHDIYQYIFNDNK persistent 548 Phosphoglucomutase WP_048761906.1 UPI000660E21E UniRef100_UPI000660E21E,UniRef50_Q2FVC1,UniRef90_A0A3S7GVM3 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 126918 127772 . - . GCA_005502385.1_01582_gene GCA_005502385.1_01582 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MVQHQFDSKPSWTGQLNLTVFNNGERSVARNIFFEKALKVIRPIYLNFSTIPTFYIVNVGGGYLDGDRYRMDINVEEDAKVTLTSQGATKIYKTLNDCVKQYQTFNIAKDGYMEYVGDPIIAYERAKFFQHNVFNLDKSASMFYTDILTPGYSEKDTPFTYDYMHLINEIYVDDVLITYDNLRMHPSETKMSSIGYMENYTHLGSAYCIHPNITQKFIEDVYDDINDYTKQYDCRIGITQLPTHGFTVRVLSNLTQEIEEVLTRVQAYIADKLYHRQLDFLRKY . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 126918 127772 . - . GCA_005502385.1_01582_mRNA GCA_005502385.1_01582 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MVQHQFDSKPSWTGQLNLTVFNNGERSVARNIFFEKALKVIRPIYLNFSTIPTFYIVNVGGGYLDGDRYRMDINVEEDAKVTLTSQGATKIYKTLNDCVKQYQTFNIAKDGYMEYVGDPIIAYERAKFFQHNVFNLDKSASMFYTDILTPGYSEKDTPFTYDYMHLINEIYVDDVLITYDNLRMHPSETKMSSIGYMENYTHLGSAYCIHPNITQKFIEDVYDDINDYTKQYDCRIGITQLPTHGFTVRVLSNLTQEIEEVLTRVQAYIADKLYHRQLDFLRKY . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 126918 127772 . - 0 GCA_005502385.1_01582 GCA_005502385.1_01582_gene,GCA_005502385.1_01582_mRNA GCA_005502385.1_01582 Urease accessory protein UreD GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MVQHQFDSKPSWTGQLNLTVFNNGERSVARNIFFEKALKVIRPIYLNFSTIPTFYIVNVGGGYLDGDRYRMDINVEEDAKVTLTSQGATKIYKTLNDCVKQYQTFNIAKDGYMEYVGDPIIAYERAKFFQHNVFNLDKSASMFYTDILTPGYSEKDTPFTYDYMHLINEIYVDDVLITYDNLRMHPSETKMSSIGYMENYTHLGSAYCIHPNITQKFIEDVYDDINDYTKQYDCRIGITQLPTHGFTVRVLSNLTQEIEEVLTRVQAYIADKLYHRQLDFLRKY persistent 284 ureD Urease accessory protein UreD UniRef50_Q2G272,UniRef90_A0A1L8Y933 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 127772 128386 . - . GCA_005502385.1_01583_gene GCA_005502385.1_01583 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MANPIKIGVGGPVGAGKTQLIEKLVRRLSKDMSIGVITNDIYTKEDQKILVNTGVLPEDRIIGVETGGCPHTAIREDASMNFAAIDELLDRHEDIELIFIESGGDNLAATFSPELVDFSIYIIDVAQGEKIPRKGGQGMIKSDYFIINKTDLAEFVGASLDQMAEDTKTFRGNRPFTFTNLKTDEGLDNVIEWIERDALLKGLA . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 127772 128386 . - . GCA_005502385.1_01583_mRNA GCA_005502385.1_01583 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MANPIKIGVGGPVGAGKTQLIEKLVRRLSKDMSIGVITNDIYTKEDQKILVNTGVLPEDRIIGVETGGCPHTAIREDASMNFAAIDELLDRHEDIELIFIESGGDNLAATFSPELVDFSIYIIDVAQGEKIPRKGGQGMIKSDYFIINKTDLAEFVGASLDQMAEDTKTFRGNRPFTFTNLKTDEGLDNVIEWIERDALLKGLA . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 127772 128386 . - 0 GCA_005502385.1_01583 GCA_005502385.1_01583_gene,GCA_005502385.1_01583_mRNA GCA_005502385.1_01583 Urease accessory protein UreG GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MANPIKIGVGGPVGAGKTQLIEKLVRRLSKDMSIGVITNDIYTKEDQKILVNTGVLPEDRIIGVETGGCPHTAIREDASMNFAAIDELLDRHEDIELIFIESGGDNLAATFSPELVDFSIYIIDVAQGEKIPRKGGQGMIKSDYFIINKTDLAEFVGASLDQMAEDTKTFRGNRPFTFTNLKTDEGLDNVIEWIERDALLKGLA persistent 204 ureG urease accessory protein UreG GO:0003924,GO:0005525,GO:0005737,GO:0016151,GO:0016530,GO:0019627,GO:0043419,GO:0046872 COG0378,O WP_017175518.1 UPI0002D90450 UniRef100_A0A1L8Y971,UniRef50_P18319,UniRef90_Q2G273 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 128399 129088 . - . GCA_005502385.1_01584_gene GCA_005502385.1_01584 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MINHSHLRLFQFCDSQFPTGAFSHSFGLETYIQRQTVHDATSFREWLELFLNEQLTYSDGLAMRLVYNALNNGDTEKVLHLDQLIYVQSLPRETRVGTKQMGTRMVKLAIELYDSPWINWYHQQMKDKRAKLHPAICFTMLGHYLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTIGQQVVTEMIPHIERTRQHILTLSEEDFGLTAPGLELNQMEHENVNVRIFIS . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 128399 129088 . - . GCA_005502385.1_01584_mRNA GCA_005502385.1_01584 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MINHSHLRLFQFCDSQFPTGAFSHSFGLETYIQRQTVHDATSFREWLELFLNEQLTYSDGLAMRLVYNALNNGDTEKVLHLDQLIYVQSLPRETRVGTKQMGTRMVKLAIELYDSPWINWYHQQMKDKRAKLHPAICFTMLGHYLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTIGQQVVTEMIPHIERTRQHILTLSEEDFGLTAPGLELNQMEHENVNVRIFIS . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 128399 129088 . - 0 GCA_005502385.1_01584 GCA_005502385.1_01584_gene,GCA_005502385.1_01584_mRNA GCA_005502385.1_01584 Urease accessory protein UreF GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MINHSHLRLFQFCDSQFPTGAFSHSFGLETYIQRQTVHDATSFREWLELFLNEQLTYSDGLAMRLVYNALNNGDTEKVLHLDQLIYVQSLPRETRVGTKQMGTRMVKLAIELYDSPWINWYHQQMKDKRAKLHPAICFTMLGHYLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTIGQQVVTEMIPHIERTRQHILTLSEEDFGLTAPGLELNQMEHENVNVRIFIS persistent 229 ureF Urease accessory protein UreF WP_017175517.1 UPI0002E1BF6A UniRef100_A0A4Q9WQ22,UniRef50_B9DLW9,UniRef90_A0A4Q9WQ22 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 129081 129533 . - . GCA_005502385.1_01585_gene GCA_005502385.1_01585 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIVEDIQGNIANLSAEEKQKHVEKVYLENSDLVKRIQRVTTDHGNEIGIRLKQPIDLQYGDILYQDDNNMIVVDVNSEDLLVIKPRNIQEMGDIAHQLGNRHLPAQFTETEMLVQYDYLVEDLLKTLGIPYSHEDRKVNKAFRHIGHSHD . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 129081 129533 . - . GCA_005502385.1_01585_mRNA GCA_005502385.1_01585 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIVEDIQGNIANLSAEEKQKHVEKVYLENSDLVKRIQRVTTDHGNEIGIRLKQPIDLQYGDILYQDDNNMIVVDVNSEDLLVIKPRNIQEMGDIAHQLGNRHLPAQFTETEMLVQYDYLVEDLLKTLGIPYSHEDRKVNKAFRHIGHSHD . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 129081 129533 . - 0 GCA_005502385.1_01585 GCA_005502385.1_01585_gene,GCA_005502385.1_01585_mRNA GCA_005502385.1_01585 Urease accessory protein UreE GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIVEDIQGNIANLSAEEKQKHVEKVYLENSDLVKRIQRVTTDHGNEIGIRLKQPIDLQYGDILYQDDNNMIVVDVNSEDLLVIKPRNIQEMGDIAHQLGNRHLPAQFTETEMLVQYDYLVEDLLKTLGIPYSHEDRKVNKAFRHIGHSHD persistent 150 ureE urease accessory protein UreE GO:0005737,GO:0006457,GO:0016151,GO:0019627,GO:0051082,GO:0065003 COG2371,O WP_002449547.1 UPI00019FC70B UniRef100_A0A1L8Y939,UniRef50_Q2G2K8,UniRef90_Q2G2K8 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 129545 131260 . - . GCA_005502385.1_01586_gene GCA_005502385.1_01586 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSFKMTQSQYTSLYGPTVGDAVRLGDTNLFATVEKDYANYGEEATFGGGKSIRDGMAQNPNVTRDDRKVADLVLTNALIIDYDKIVKADIGVKNGYIFAIGKAGNPDIMDNVDIIIGSTTDIISAEGKIVTAGGIDTHVHFINPEQAEVALESGVTTHIGGGTGASEGAKATTVTPGPWHIHRMLEAAEDLPINVGFTGKGQAVNHTALIEQIHAGVIGLKVHEDWGATPSALSHALDVADEFDVQIALHADTLNEAGFMEDTMAAVKDRVLHMYHTEGAGGGHAPDLIKSASYPNILPSSTNPTLPYTHNTVDEHLDMVMITHHLNASIPEDIAFADSRIRKETIAAEDVLQDMGVFSMVSSDSQAMGRVGEVITRTWQVAHRMKEQRGALEGDTDYNDNNRIKRYIAKYTINPAITHGISDYVGSIEKGKLADLVLWNPAFFGIKPELVVKGGLINSAVNGDANASIPTSEPMKYRKMYGQYGANKQHTAITFVSKTAYENGIYNQLNLERMVRPVHGIRNLTKKDMKNNDATPKLDVDPQTYEVFVDGEKITSEPATELPLAQRYFLF . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 129545 131260 . - . GCA_005502385.1_01586_mRNA GCA_005502385.1_01586 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSFKMTQSQYTSLYGPTVGDAVRLGDTNLFATVEKDYANYGEEATFGGGKSIRDGMAQNPNVTRDDRKVADLVLTNALIIDYDKIVKADIGVKNGYIFAIGKAGNPDIMDNVDIIIGSTTDIISAEGKIVTAGGIDTHVHFINPEQAEVALESGVTTHIGGGTGASEGAKATTVTPGPWHIHRMLEAAEDLPINVGFTGKGQAVNHTALIEQIHAGVIGLKVHEDWGATPSALSHALDVADEFDVQIALHADTLNEAGFMEDTMAAVKDRVLHMYHTEGAGGGHAPDLIKSASYPNILPSSTNPTLPYTHNTVDEHLDMVMITHHLNASIPEDIAFADSRIRKETIAAEDVLQDMGVFSMVSSDSQAMGRVGEVITRTWQVAHRMKEQRGALEGDTDYNDNNRIKRYIAKYTINPAITHGISDYVGSIEKGKLADLVLWNPAFFGIKPELVVKGGLINSAVNGDANASIPTSEPMKYRKMYGQYGANKQHTAITFVSKTAYENGIYNQLNLERMVRPVHGIRNLTKKDMKNNDATPKLDVDPQTYEVFVDGEKITSEPATELPLAQRYFLF . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 129545 131260 . - 0 GCA_005502385.1_01586 GCA_005502385.1_01586_gene,GCA_005502385.1_01586_mRNA GCA_005502385.1_01586 Urease subunit alpha GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSFKMTQSQYTSLYGPTVGDAVRLGDTNLFATVEKDYANYGEEATFGGGKSIRDGMAQNPNVTRDDRKVADLVLTNALIIDYDKIVKADIGVKNGYIFAIGKAGNPDIMDNVDIIIGSTTDIISAEGKIVTAGGIDTHVHFINPEQAEVALESGVTTHIGGGTGASEGAKATTVTPGPWHIHRMLEAAEDLPINVGFTGKGQAVNHTALIEQIHAGVIGLKVHEDWGATPSALSHALDVADEFDVQIALHADTLNEAGFMEDTMAAVKDRVLHMYHTEGAGGGHAPDLIKSASYPNILPSSTNPTLPYTHNTVDEHLDMVMITHHLNASIPEDIAFADSRIRKETIAAEDVLQDMGVFSMVSSDSQAMGRVGEVITRTWQVAHRMKEQRGALEGDTDYNDNNRIKRYIAKYTINPAITHGISDYVGSIEKGKLADLVLWNPAFFGIKPELVVKGGLINSAVNGDANASIPTSEPMKYRKMYGQYGANKQHTAITFVSKTAYENGIYNQLNLERMVRPVHGIRNLTKKDMKNNDATPKLDVDPQTYEVFVDGEKITSEPATELPLAQRYFLF persistent 571 ureC urease subunit alpha 3.5.1.5 GO:0005737,GO:0009039,GO:0016151,GO:0019627,GO:0043419 COG0804,E WP_017175516.1 UPI0002D408F8 UniRef100_A0A4Q9WR30,UniRef50_Q7N4Y7,UniRef90_Q5HLW1 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 130817 131106 . + . GCA_005502385.1_01587_gene GCA_005502385.1_01587 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 130817 131106 . + . GCA_005502385.1_01587_mRNA GCA_005502385.1_01587 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 . . . . . . . GCA_005502385.1|SCOV01000004.1 Infernal:001001 misc_RNA 130817 131106 81.0 + . GCA_005502385.1_01587 GCA_005502385.1_01587_gene,GCA_005502385.1_01587_mRNA GCA_005502385.1_01587 5_ureB_sRNA GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 131260 131667 . - . GCA_005502385.1_01588_gene GCA_005502385.1_01588 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKPGEIKIKNTEVEINQGHFETVINVKNTGDRPIQVGSHFHFFEANEGLKFDREKAYGKHLDIPAGAAVRFEPGDEKKVQLVEYAGNRKIYGFRGLVNGEIDEDRVYRPTGENDEYAAPKGDNGEKNVNKMGGKQ . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 131260 131667 . - . GCA_005502385.1_01588_mRNA GCA_005502385.1_01588 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKPGEIKIKNTEVEINQGHFETVINVKNTGDRPIQVGSHFHFFEANEGLKFDREKAYGKHLDIPAGAAVRFEPGDEKKVQLVEYAGNRKIYGFRGLVNGEIDEDRVYRPTGENDEYAAPKGDNGEKNVNKMGGKQ . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 131260 131667 . - 0 GCA_005502385.1_01588 GCA_005502385.1_01588_gene,GCA_005502385.1_01588_mRNA GCA_005502385.1_01588 Urease subunit beta GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKPGEIKIKNTEVEINQGHFETVINVKNTGDRPIQVGSHFHFFEANEGLKFDREKAYGKHLDIPAGAAVRFEPGDEKKVQLVEYAGNRKIYGFRGLVNGEIDEDRVYRPTGENDEYAAPKGDNGEKNVNKMGGKQ persistent 135 urease subunit beta 3.5.1.5 GO:0035550,GO:0043419 WP_017175515.1 UPI0002F70555 UniRef100_A0A4Q9WQ50,UniRef50_Q4A0J4,UniRef90_A0A657M8X1 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 131681 131983 . - . GCA_005502385.1_01589_gene GCA_005502385.1_01589 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MHFTQREQDKLMIVVAAEVARRRKARGLKLNYPEALALISDELLEGARDGKTVADLMSYGKQILNKDDVMEGVDSMLTDIEIEATFPDGTKLITIHHPIV . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 131681 131983 . - . GCA_005502385.1_01589_mRNA GCA_005502385.1_01589 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MHFTQREQDKLMIVVAAEVARRRKARGLKLNYPEALALISDELLEGARDGKTVADLMSYGKQILNKDDVMEGVDSMLTDIEIEATFPDGTKLITIHHPIV . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 131681 131983 . - 0 GCA_005502385.1_01589 GCA_005502385.1_01589_gene,GCA_005502385.1_01589_mRNA GCA_005502385.1_01589 Urease subunit gamma GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MHFTQREQDKLMIVVAAEVARRRKARGLKLNYPEALALISDELLEGARDGKTVADLMSYGKQILNKDDVMEGVDSMLTDIEIEATFPDGTKLITIHHPIV persistent 100 ureA urease subunit gamma 3.5.1.5 GO:0005737,GO:0009039,GO:0016151,GO:0043419 COG0831,E WP_002449337.1 UPI00019FC708 UniRef100_A0A1L8Y9B7,UniRef50_Q89UG3,UniRef90_Q2FVW5 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 132184 133086 . + . GCA_005502385.1_01590_gene GCA_005502385.1_01590 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKYVEIFLKNIAQVVFMNNKWSGLCILIGLFIANWKVGLGAAVGSLIALVLAPYFNYSEDEIHDGLAGYNSVLTAIGLALFLEVSLMNWIVLIVATTLTLPVGAAIREILKPYGLPMLTFPFVFMTWLILAMGMQFSKMHITIDILPTKIKHPDISHSHVNFISGIITNFSEIFLVTSIIGSLLIMIGIFIGSVKGGIYAVVSSILAVICITLLGGDYPTITDGLYGYNSILTGIALGATFKTKFNPILAVITGLLLTVVMHGALATTLAPIGLPIFTAPFIFATWLVMFAGKEQHEVKS . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 132184 133086 . + . GCA_005502385.1_01590_mRNA GCA_005502385.1_01590 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKYVEIFLKNIAQVVFMNNKWSGLCILIGLFIANWKVGLGAAVGSLIALVLAPYFNYSEDEIHDGLAGYNSVLTAIGLALFLEVSLMNWIVLIVATTLTLPVGAAIREILKPYGLPMLTFPFVFMTWLILAMGMQFSKMHITIDILPTKIKHPDISHSHVNFISGIITNFSEIFLVTSIIGSLLIMIGIFIGSVKGGIYAVVSSILAVICITLLGGDYPTITDGLYGYNSILTGIALGATFKTKFNPILAVITGLLLTVVMHGALATTLAPIGLPIFTAPFIFATWLVMFAGKEQHEVKS . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 132184 133086 . + 0 GCA_005502385.1_01590 GCA_005502385.1_01590_gene,GCA_005502385.1_01590_mRNA GCA_005502385.1_01590 Urea transporter GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKYVEIFLKNIAQVVFMNNKWSGLCILIGLFIANWKVGLGAAVGSLIALVLAPYFNYSEDEIHDGLAGYNSVLTAIGLALFLEVSLMNWIVLIVATTLTLPVGAAIREILKPYGLPMLTFPFVFMTWLILAMGMQFSKMHITIDILPTKIKHPDISHSHVNFISGIITNFSEIFLVTSIIGSLLIMIGIFIGSVKGGIYAVVSSILAVICITLLGGDYPTITDGLYGYNSILTGIALGATFKTKFNPILAVITGLLLTVVMHGALATTLAPIGLPIFTAPFIFATWLVMFAGKEQHEVKS persistent 300 yut urea transporter GO:0015204,GO:0015840,GO:0016020 WP_070548029.1 UPI0008A4FEEB UniRef100_UPI0008A4FEEB,UniRef50_A0A3S7GVE9,UniRef90_A0A3S7GVE9 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 133205 134083 . + . GCA_005502385.1_01591_gene GCA_005502385.1_01591 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKRIYVVGSMSMDLVVSTDQVPSKGETVLGNTFFTTPGGKGANQAVAAARLGDHVHMVGCIGDDMLGKQILENLKHNHVNVEYVKKVKGPSGTAHITLADNDNSIIVVPSANHKVTVSLVDSALSKANKGDIVLLQQEIPADVVAHAVHYCYEHELTSILNPAPYRDISDDILEQVTYLTPNETESENMFEGDIEQALERYPDKLIVTQGALGAVFYDGIEQVEIQGIEREVKDTTGAGDTFNGALAVGLQKDYSLAKAIAFANVAASHSVTALGAQGGMPTINDIAKDLDM . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 133205 134083 . + . GCA_005502385.1_01591_mRNA GCA_005502385.1_01591 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKRIYVVGSMSMDLVVSTDQVPSKGETVLGNTFFTTPGGKGANQAVAAARLGDHVHMVGCIGDDMLGKQILENLKHNHVNVEYVKKVKGPSGTAHITLADNDNSIIVVPSANHKVTVSLVDSALSKANKGDIVLLQQEIPADVVAHAVHYCYEHELTSILNPAPYRDISDDILEQVTYLTPNETESENMFEGDIEQALERYPDKLIVTQGALGAVFYDGIEQVEIQGIEREVKDTTGAGDTFNGALAVGLQKDYSLAKAIAFANVAASHSVTALGAQGGMPTINDIAKDLDM . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 133205 134083 . + 0 GCA_005502385.1_01591 GCA_005502385.1_01591_gene,GCA_005502385.1_01591_mRNA GCA_005502385.1_01591 Ribokinase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKRIYVVGSMSMDLVVSTDQVPSKGETVLGNTFFTTPGGKGANQAVAAARLGDHVHMVGCIGDDMLGKQILENLKHNHVNVEYVKKVKGPSGTAHITLADNDNSIIVVPSANHKVTVSLVDSALSKANKGDIVLLQQEIPADVVAHAVHYCYEHELTSILNPAPYRDISDDILEQVTYLTPNETESENMFEGDIEQALERYPDKLIVTQGALGAVFYDGIEQVEIQGIEREVKDTTGAGDTFNGALAVGLQKDYSLAKAIAFANVAASHSVTALGAQGGMPTINDIAKDLDM persistent 292 Ribokinase 2.7.1.15 WP_137689612.1 UPI0010F79906 UniRef100_UPI0010F79906,UniRef50_A0A2M9MWI4,UniRef90_A0A657M5Y9 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 134223 135362 . + . GCA_005502385.1_01592_gene GCA_005502385.1_01592 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTKKYLLSTLIVLISIFLCACQFSTLSSSKKDTKKNKENIANMYAKKSTQNKKDWQVYQGDVAHVFYHPVITEPKVAFTQEKNQAKGNFDWMITADEFKRSLNELYKHHYILIDPHEAYDLKGKTVTKKELKLPKGKKPLILSIDDMNYYEYMRGHGYADRLVLDQKQHVVSETKDKNGKVTTSETNDIVPILNQFVKDHPDFSLHGQKGVVALTGYNGVLGYRTNELNNKDYPKRKKEAEKVVKAMKRDGWTFASHSWGHIDFANSSYHQIVRDTKRWKKEVEPIIGKTDLFIYPHGAQDRGSKAYQYLVHDEGFKFLAGVGPNNFTDIGNDSVYQDRVAIDGLNLYDFKYKLKPFLDPSKVYSEKDRQYFKGDKSYQ . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 134223 135362 . + . GCA_005502385.1_01592_mRNA GCA_005502385.1_01592 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTKKYLLSTLIVLISIFLCACQFSTLSSSKKDTKKNKENIANMYAKKSTQNKKDWQVYQGDVAHVFYHPVITEPKVAFTQEKNQAKGNFDWMITADEFKRSLNELYKHHYILIDPHEAYDLKGKTVTKKELKLPKGKKPLILSIDDMNYYEYMRGHGYADRLVLDQKQHVVSETKDKNGKVTTSETNDIVPILNQFVKDHPDFSLHGQKGVVALTGYNGVLGYRTNELNNKDYPKRKKEAEKVVKAMKRDGWTFASHSWGHIDFANSSYHQIVRDTKRWKKEVEPIIGKTDLFIYPHGAQDRGSKAYQYLVHDEGFKFLAGVGPNNFTDIGNDSVYQDRVAIDGLNLYDFKYKLKPFLDPSKVYSEKDRQYFKGDKSYQ . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 134223 135362 . + 0 GCA_005502385.1_01592 GCA_005502385.1_01592_gene,GCA_005502385.1_01592_mRNA GCA_005502385.1_01592 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTKKYLLSTLIVLISIFLCACQFSTLSSSKKDTKKNKENIANMYAKKSTQNKKDWQVYQGDVAHVFYHPVITEPKVAFTQEKNQAKGNFDWMITADEFKRSLNELYKHHYILIDPHEAYDLKGKTVTKKELKLPKGKKPLILSIDDMNYYEYMRGHGYADRLVLDQKQHVVSETKDKNGKVTTSETNDIVPILNQFVKDHPDFSLHGQKGVVALTGYNGVLGYRTNELNNKDYPKRKKEAEKVVKAMKRDGWTFASHSWGHIDFANSSYHQIVRDTKRWKKEVEPIIGKTDLFIYPHGAQDRGSKAYQYLVHDEGFKFLAGVGPNNFTDIGNDSVYQDRVAIDGLNLYDFKYKLKPFLDPSKVYSEKDRQYFKGDKSYQ persistent 379 Polysaccharide deacetylase WP_137689613.1 UPI0010F5208E UniRef100_UPI0010F5208E,UniRef50_Q2FUT5,UniRef90_A0A3S7GVN9 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 135528 136679 . + . GCA_005502385.1_01593_gene GCA_005502385.1_01593 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MFLKVTQSIGILSLFTLLGTSISHAAETPVDITNKEGNVAVSSNYEPDGVTLTTQQGQILYNFQGNKEADPASLSKMMTIYLTLEAVHQGKLKLDDKVKITSAYDQLSKKPNLTSVPLNQGQIYTIKDLLTQAALPSSNSAAMILGEQVSGNTSTFTDKMNAQAKAFHMKHTYFVNPAGAANDLLGQQAPKKYKQDIYPKSTAEDIAILSHHLIAKHPKFLNITQLSQDTQKGYTFNNTNLSIKHEPLYLKGTDGLKTGTSDKGYNIALTNQQNHLRLNEVVMNVAPYMDNNAKYNRNRIGNAIFKHYRKEYEYKKVLSKGEHKIDGKTYKVDKNLYDTVPKDNKKWDIRINKDGKAYVHYKRDFLPETTYPRVNAKKVWKWF . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 135528 136679 . + . GCA_005502385.1_01593_mRNA GCA_005502385.1_01593 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MFLKVTQSIGILSLFTLLGTSISHAAETPVDITNKEGNVAVSSNYEPDGVTLTTQQGQILYNFQGNKEADPASLSKMMTIYLTLEAVHQGKLKLDDKVKITSAYDQLSKKPNLTSVPLNQGQIYTIKDLLTQAALPSSNSAAMILGEQVSGNTSTFTDKMNAQAKAFHMKHTYFVNPAGAANDLLGQQAPKKYKQDIYPKSTAEDIAILSHHLIAKHPKFLNITQLSQDTQKGYTFNNTNLSIKHEPLYLKGTDGLKTGTSDKGYNIALTNQQNHLRLNEVVMNVAPYMDNNAKYNRNRIGNAIFKHYRKEYEYKKVLSKGEHKIDGKTYKVDKNLYDTVPKDNKKWDIRINKDGKAYVHYKRDFLPETTYPRVNAKKVWKWF . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 135528 136679 . + 0 GCA_005502385.1_01593 GCA_005502385.1_01593_gene,GCA_005502385.1_01593_mRNA GCA_005502385.1_01593 D-alanyl-D-alanine carboxypeptidase DacA GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MFLKVTQSIGILSLFTLLGTSISHAAETPVDITNKEGNVAVSSNYEPDGVTLTTQQGQILYNFQGNKEADPASLSKMMTIYLTLEAVHQGKLKLDDKVKITSAYDQLSKKPNLTSVPLNQGQIYTIKDLLTQAALPSSNSAAMILGEQVSGNTSTFTDKMNAQAKAFHMKHTYFVNPAGAANDLLGQQAPKKYKQDIYPKSTAEDIAILSHHLIAKHPKFLNITQLSQDTQKGYTFNNTNLSIKHEPLYLKGTDGLKTGTSDKGYNIALTNQQNHLRLNEVVMNVAPYMDNNAKYNRNRIGNAIFKHYRKEYEYKKVLSKGEHKIDGKTYKVDKNLYDTVPKDNKKWDIRINKDGKAYVHYKRDFLPETTYPRVNAKKVWKWF persistent 383 pbp4 penicillin-binding protein PBP4 WP_093514825.1 UPI0008C8E9C9 UniRef100_UPI0008C8E9C9,UniRef50_A0A4V6KIS0,UniRef90_A0A3S7GVX5 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 136773 137357 . - . GCA_005502385.1_01594_gene GCA_005502385.1_01594 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNNQDLRVQRTKKALITTFSDLLETKSFENITIQDLCEKANVRRSTFYRHFNDKYDLLNHIVGTLIEYFRTLHLPEIDPKDPRQFFNKFMKDILFFISDNKTMVKSVISINIYSEVYQILYNQIYAVVKRQIEFDKQIGQFYIDEFIYGEFLTGGILSVILNWIQYGQQSIDEVSSDIVTMICGAREVHLKLLK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 136773 137357 . - . GCA_005502385.1_01594_mRNA GCA_005502385.1_01594 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNNQDLRVQRTKKALITTFSDLLETKSFENITIQDLCEKANVRRSTFYRHFNDKYDLLNHIVGTLIEYFRTLHLPEIDPKDPRQFFNKFMKDILFFISDNKTMVKSVISINIYSEVYQILYNQIYAVVKRQIEFDKQIGQFYIDEFIYGEFLTGGILSVILNWIQYGQQSIDEVSSDIVTMICGAREVHLKLLK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 136773 137357 . - 0 GCA_005502385.1_01594 GCA_005502385.1_01594_gene,GCA_005502385.1_01594_mRNA GCA_005502385.1_01594 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MNNQDLRVQRTKKALITTFSDLLETKSFENITIQDLCEKANVRRSTFYRHFNDKYDLLNHIVGTLIEYFRTLHLPEIDPKDPRQFFNKFMKDILFFISDNKTMVKSVISINIYSEVYQILYNQIYAVVKRQIEFDKQIGQFYIDEFIYGEFLTGGILSVILNWIQYGQQSIDEVSSDIVTMICGAREVHLKLLK persistent 194 TetR/AcrR family transcriptional regulator WP_017175510.1 UPI000303B5C7 UniRef100_A0A3S7GVT6,UniRef50_A0A974KYK6,UniRef90_A0A974KYK6 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 137554 139329 . + . GCA_005502385.1_01595_gene GCA_005502385.1_01595 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MYYSNGNYEAFARPKKPDYVAQKSAYLIGSGLASLAAACFLIRDGQMDGSNIHILEELSKSGGSLDGTELPMKGYVMRGGREMENHFECLWDLFRSIPSLEIEDASVLDEFYWLNKEDPNYSRCRVIEERGQRLPTDGDFTLTKQAMKEILQLCMMKEEDLNDVKISDVLSEDFMNSNFWIYWKTMFAFEPWHSAMEMRRYLMRFVHHIGGLADFSALKFTKYNQYESLVRPMIAYLTSHGVQFEYNVQVLDVKVDVTTKDKVAKTIELKRNGNKETIQLTPDDLVFITNGSITESSTYGDNDTPAPPTKDIGGSWNLWRNLAKQSPEFGNPEKFYKDLPDKSWFVSATVTTNNKTVIEAIERLCKRDPLSGKTVTGGIITVNDSKWQMSFTVNRQQQFKEQSKDEVSVWVYALYSDEKGDYIHKPIVECSGHEICQEWLYHMGLPIDQIECLATQHCNTIPVYMPYICSYFMPRSIGDRPLVVPQHSRNLAFIGNFAETERDTVFTTEYSVRTAMEAVYQLLDIDRGVPEVIATEFDMRVLLDAMYELNDRKDLKTLAKQNKIQQVALHTFLKKIEGTFVEELLTQHKLL . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 137554 139329 . + . GCA_005502385.1_01595_mRNA GCA_005502385.1_01595 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MYYSNGNYEAFARPKKPDYVAQKSAYLIGSGLASLAAACFLIRDGQMDGSNIHILEELSKSGGSLDGTELPMKGYVMRGGREMENHFECLWDLFRSIPSLEIEDASVLDEFYWLNKEDPNYSRCRVIEERGQRLPTDGDFTLTKQAMKEILQLCMMKEEDLNDVKISDVLSEDFMNSNFWIYWKTMFAFEPWHSAMEMRRYLMRFVHHIGGLADFSALKFTKYNQYESLVRPMIAYLTSHGVQFEYNVQVLDVKVDVTTKDKVAKTIELKRNGNKETIQLTPDDLVFITNGSITESSTYGDNDTPAPPTKDIGGSWNLWRNLAKQSPEFGNPEKFYKDLPDKSWFVSATVTTNNKTVIEAIERLCKRDPLSGKTVTGGIITVNDSKWQMSFTVNRQQQFKEQSKDEVSVWVYALYSDEKGDYIHKPIVECSGHEICQEWLYHMGLPIDQIECLATQHCNTIPVYMPYICSYFMPRSIGDRPLVVPQHSRNLAFIGNFAETERDTVFTTEYSVRTAMEAVYQLLDIDRGVPEVIATEFDMRVLLDAMYELNDRKDLKTLAKQNKIQQVALHTFLKKIEGTFVEELLTQHKLL . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 137554 139329 . + 0 GCA_005502385.1_01595 GCA_005502385.1_01595_gene,GCA_005502385.1_01595_mRNA GCA_005502385.1_01595 Oleate hydratase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MYYSNGNYEAFARPKKPDYVAQKSAYLIGSGLASLAAACFLIRDGQMDGSNIHILEELSKSGGSLDGTELPMKGYVMRGGREMENHFECLWDLFRSIPSLEIEDASVLDEFYWLNKEDPNYSRCRVIEERGQRLPTDGDFTLTKQAMKEILQLCMMKEEDLNDVKISDVLSEDFMNSNFWIYWKTMFAFEPWHSAMEMRRYLMRFVHHIGGLADFSALKFTKYNQYESLVRPMIAYLTSHGVQFEYNVQVLDVKVDVTTKDKVAKTIELKRNGNKETIQLTPDDLVFITNGSITESSTYGDNDTPAPPTKDIGGSWNLWRNLAKQSPEFGNPEKFYKDLPDKSWFVSATVTTNNKTVIEAIERLCKRDPLSGKTVTGGIITVNDSKWQMSFTVNRQQQFKEQSKDEVSVWVYALYSDEKGDYIHKPIVECSGHEICQEWLYHMGLPIDQIECLATQHCNTIPVYMPYICSYFMPRSIGDRPLVVPQHSRNLAFIGNFAETERDTVFTTEYSVRTAMEAVYQLLDIDRGVPEVIATEFDMRVLLDAMYELNDRKDLKTLAKQNKIQQVALHTFLKKIEGTFVEELLTQHKLL persistent 591 oleate hydratase 4.2.1.53 GO:0006631,GO:0050151,GO:0071949 WP_137689614.1 UPI0010F64B7C UniRef100_UPI0010F64B7C,UniRef50_B9E972,UniRef90_A0A3S7GYK9 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 139390 139584 . - . GCA_005502385.1_01596_gene GCA_005502385.1_01596 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIDKGNTVILIEHNLTMMTEADGFIDIGPFAGKHGGQLLYAGDPKGLLNINNSVTAKHLRRYIE . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 139390 139584 . - . GCA_005502385.1_01596_mRNA GCA_005502385.1_01596 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIDKGNTVILIEHNLTMMTEADGFIDIGPFAGKHGGQLLYAGDPKGLLNINNSVTAKHLRRYIE . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 139390 139584 . - 0 GCA_005502385.1_01596 GCA_005502385.1_01596_gene,GCA_005502385.1_01596_mRNA GCA_005502385.1_01596 UvrABC system protein A GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MIDKGNTVILIEHNLTMMTEADGFIDIGPFAGKHGGQLLYAGDPKGLLNINNSVTAKHLRRYIE shell 64 hypothetical protein UniRef50_UPI0030BC5E6F,UniRef90_UPI0030BC5E6F . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 139750 140535 . - . GCA_005502385.1_01597_gene GCA_005502385.1_01597 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDIKAIEDYLNIESQRYPQPTLDALNYYMERFMLTVPFENISVQNKEKISVDLDYLFNKFIYQHRGGFCYEMNHFFGSYLEAKGFKVFRMSATVHQPNGNYSPKGSHLSLVVLINNGYYIADVGFGDLPLQALPITSIEATQIVFEKTGQFRAIFETPTTYLLQKLEETTWVTRYKAEFISRDIHDFDKMINYNTSHPESIFVKQLMITKPQNFGRATMSYHHLTLTKRYKKEQFAVTRENYKDFLKTYFNLDVTILPLEK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 139750 140535 . - . GCA_005502385.1_01597_mRNA GCA_005502385.1_01597 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDIKAIEDYLNIESQRYPQPTLDALNYYMERFMLTVPFENISVQNKEKISVDLDYLFNKFIYQHRGGFCYEMNHFFGSYLEAKGFKVFRMSATVHQPNGNYSPKGSHLSLVVLINNGYYIADVGFGDLPLQALPITSIEATQIVFEKTGQFRAIFETPTTYLLQKLEETTWVTRYKAEFISRDIHDFDKMINYNTSHPESIFVKQLMITKPQNFGRATMSYHHLTLTKRYKKEQFAVTRENYKDFLKTYFNLDVTILPLEK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 139750 140535 . - 0 GCA_005502385.1_01597 GCA_005502385.1_01597_gene,GCA_005502385.1_01597_mRNA GCA_005502385.1_01597 Arylamine N-acetyltransferase / N-hydroxyarylamine O-acetyltransferase GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MDIKAIEDYLNIESQRYPQPTLDALNYYMERFMLTVPFENISVQNKEKISVDLDYLFNKFIYQHRGGFCYEMNHFFGSYLEAKGFKVFRMSATVHQPNGNYSPKGSHLSLVVLINNGYYIADVGFGDLPLQALPITSIEATQIVFEKTGQFRAIFETPTTYLLQKLEETTWVTRYKAEFISRDIHDFDKMINYNTSHPESIFVKQLMITKPQNFGRATMSYHHLTLTKRYKKEQFAVTRENYKDFLKTYFNLDVTILPLEK persistent 261 Acetyltransferase WP_019834750.1 UPI000382CC56 UniRef100_UPI000382CC56,UniRef50_A0A4U9T1N9,UniRef90_A0A3S7GZK8 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 140616 141251 . - . GCA_005502385.1_01598_gene GCA_005502385.1_01598 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKGLILSSFYASKKSLITYLIIGIVLSIVFAFFSPMMCCFMLMVMLLSPVSDNLKREKDSKWMYYVSTLPTHRHTYVKAYFAFYGLLILLGLIIGAIICLIVTQDIMVTLFSAFIGIGMACTYALMFPLTFKFGPENSNVIMLTTAVVAVALFLSMWFFAVMPILIKAGSISKIASNPLVLVATGSYALLGVIIFVISYFSSLSIFKKQEL . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 140616 141251 . - . GCA_005502385.1_01598_mRNA GCA_005502385.1_01598 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKGLILSSFYASKKSLITYLIIGIVLSIVFAFFSPMMCCFMLMVMLLSPVSDNLKREKDSKWMYYVSTLPTHRHTYVKAYFAFYGLLILLGLIIGAIICLIVTQDIMVTLFSAFIGIGMACTYALMFPLTFKFGPENSNVIMLTTAVVAVALFLSMWFFAVMPILIKAGSISKIASNPLVLVATGSYALLGVIIFVISYFSSLSIFKKQEL . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 140616 141251 . - 0 GCA_005502385.1_01598 GCA_005502385.1_01598_gene,GCA_005502385.1_01598_mRNA GCA_005502385.1_01598 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKGLILSSFYASKKSLITYLIIGIVLSIVFAFFSPMMCCFMLMVMLLSPVSDNLKREKDSKWMYYVSTLPTHRHTYVKAYFAFYGLLILLGLIIGAIICLIVTQDIMVTLFSAFIGIGMACTYALMFPLTFKFGPENSNVIMLTTAVVAVALFLSMWFFAVMPILIKAGSISKIASNPLVLVATGSYALLGVIIFVISYFSSLSIFKKQEL persistent 211 ABC-2 transporter permease WP_002449477.1 UPI00019FC655 UniRef100_UPI00019FC655,UniRef50_A0A853UZL4,UniRef90_A0AAE5JL64 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 141251 142096 . - . GCA_005502385.1_01599_gene GCA_005502385.1_01599 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTHLLQVQQLNKSYKNSNFELNDISFTLNPGEVIGLIGKNGSGKSTLINTLVGNRFKDSGEISFFNQIISEKDKDYKEHVGVVFDDLRVPNKLTITEIDKVFLNIFKHWNSDQFFNLIQSFELPKNNQISTFSRGMRMKAALAIALSHETKLLILDEATAGMDVSGREEVLEILEDYVSKGHGILLSSHISEDMEQLATKLIFMRDGHILLQEDKHILLTDYGIIETDETSPLDLPQEVIIASRIRHGQRQTLVKQRQHFEQARPLQSIDDATKLIMRGDK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 141251 142096 . - . GCA_005502385.1_01599_mRNA GCA_005502385.1_01599 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTHLLQVQQLNKSYKNSNFELNDISFTLNPGEVIGLIGKNGSGKSTLINTLVGNRFKDSGEISFFNQIISEKDKDYKEHVGVVFDDLRVPNKLTITEIDKVFLNIFKHWNSDQFFNLIQSFELPKNNQISTFSRGMRMKAALAIALSHETKLLILDEATAGMDVSGREEVLEILEDYVSKGHGILLSSHISEDMEQLATKLIFMRDGHILLQEDKHILLTDYGIIETDETSPLDLPQEVIIASRIRHGQRQTLVKQRQHFEQARPLQSIDDATKLIMRGDK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 141251 142096 . - 0 GCA_005502385.1_01599 GCA_005502385.1_01599_gene,GCA_005502385.1_01599_mRNA GCA_005502385.1_01599 Vitamin B12 import ATP-binding protein BtuD GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTHLLQVQQLNKSYKNSNFELNDISFTLNPGEVIGLIGKNGSGKSTLINTLVGNRFKDSGEISFFNQIISEKDKDYKEHVGVVFDDLRVPNKLTITEIDKVFLNIFKHWNSDQFFNLIQSFELPKNNQISTFSRGMRMKAALAIALSHETKLLILDEATAGMDVSGREEVLEILEDYVSKGHGILLSSHISEDMEQLATKLIFMRDGHILLQEDKHILLTDYGIIETDETSPLDLPQEVIIASRIRHGQRQTLVKQRQHFEQARPLQSIDDATKLIMRGDK persistent 281 ABC transporter ATP-binding protein WP_002449350.1 UPI00019FC654 UniRef100_UPI00019FC654,UniRef50_A0A1D4LL40,UniRef90_A0A3S7GVF0 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 142127 142849 . - . GCA_005502385.1_01600_gene GCA_005502385.1_01600 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKIGRFIITLLMGGLVGGCIALFINYNHTFHFFGNYHYATHSNVILISLICVTLILVLSMYLIMIQKKAVHYKRLSETHIDEDEADSYDKKANLAYMQNSFIYYLELTISFIALFIIVLGNGNSSASSWALLPFMTTIISSVITGLFYRKFDSRYPKLGEKNYAEKLINILDEGERHIYFNSLFKTFYINLSLIMIGAIFLGFYSLETGHSQTLGIFILIILFIYNGFSHLLKTYKFYHS . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 142127 142849 . - . GCA_005502385.1_01600_mRNA GCA_005502385.1_01600 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKIGRFIITLLMGGLVGGCIALFINYNHTFHFFGNYHYATHSNVILISLICVTLILVLSMYLIMIQKKAVHYKRLSETHIDEDEADSYDKKANLAYMQNSFIYYLELTISFIALFIIVLGNGNSSASSWALLPFMTTIISSVITGLFYRKFDSRYPKLGEKNYAEKLINILDEGERHIYFNSLFKTFYINLSLIMIGAIFLGFYSLETGHSQTLGIFILIILFIYNGFSHLLKTYKFYHS . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 142127 142849 . - 0 GCA_005502385.1_01600 GCA_005502385.1_01600_gene,GCA_005502385.1_01600_mRNA GCA_005502385.1_01600 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKIGRFIITLLMGGLVGGCIALFINYNHTFHFFGNYHYATHSNVILISLICVTLILVLSMYLIMIQKKAVHYKRLSETHIDEDEADSYDKKANLAYMQNSFIYYLELTISFIALFIIVLGNGNSSASSWALLPFMTTIISSVITGLFYRKFDSRYPKLGEKNYAEKLINILDEGERHIYFNSLFKTFYINLSLIMIGAIFLGFYSLETGHSQTLGIFILIILFIYNGFSHLLKTYKFYHS persistent 240 DUF3169 domain-containing protein UniRef50_A0AAE5MYI4,UniRef90_A0AAE5MYI4 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 142846 143049 . - . GCA_005502385.1_01601_gene GCA_005502385.1_01601 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MRNRLKELRAREGYNQTQLAKKAGISRQTVSLIERNDFTPSILTAMKIARIFNEPVESIFMIEEEDL . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 142846 143049 . - . GCA_005502385.1_01601_mRNA GCA_005502385.1_01601 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MRNRLKELRAREGYNQTQLAKKAGISRQTVSLIERNDFTPSILTAMKIARIFNEPVESIFMIEEEDL . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 142846 143049 . - 0 GCA_005502385.1_01601 GCA_005502385.1_01601_gene,GCA_005502385.1_01601_mRNA GCA_005502385.1_01601 hypothetical protein """""" GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MRNRLKELRAREGYNQTQLAKKAGISRQTVSLIERNDFTPSILTAMKIARIFNEPVESIFMIEEEDL persistent 67 xRE Uncharacterized HTH-type transcriptional regulator YgzD COG1476,K WP_049334900.1 UPI00066AAC15 UniRef100_UPI00066AAC15,UniRef50_Q2G1V7,UniRef90_A0A654CNZ3 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 143176 143658 . - . GCA_005502385.1_01602_gene GCA_005502385.1_01602 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKLSTGWEQAIYVLLILNQLPHQSVMTSTALSKRLKVSDSYLKKIVKALVKENLVYSTTGKNGGFTLRKKLKDITFYDVFLAIEGRGNIFSSQHLLTNFLGEKEGHKAQQCNISIALNHIEHTLISTLSDINLDDIYQDIINHYNLEDITQWIVLNSKTL . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 143176 143658 . - . GCA_005502385.1_01602_mRNA GCA_005502385.1_01602 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKLSTGWEQAIYVLLILNQLPHQSVMTSTALSKRLKVSDSYLKKIVKALVKENLVYSTTGKNGGFTLRKKLKDITFYDVFLAIEGRGNIFSSQHLLTNFLGEKEGHKAQQCNISIALNHIEHTLISTLSDINLDDIYQDIINHYNLEDITQWIVLNSKTL . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 143176 143658 . - 0 GCA_005502385.1_01602 GCA_005502385.1_01602_gene,GCA_005502385.1_01602_mRNA GCA_005502385.1_01602 HTH-type transcriptional repressor NsrR GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKLSTGWEQAIYVLLILNQLPHQSVMTSTALSKRLKVSDSYLKKIVKALVKENLVYSTTGKNGGFTLRKKLKDITFYDVFLAIEGRGNIFSSQHLLTNFLGEKEGHKAQQCNISIALNHIEHTLISTLSDINLDDIYQDIINHYNLEDITQWIVLNSKTL persistent 160 Rrf2 family transcriptional regulator WP_137689616.1 UPI0010F481D9 UniRef100_UPI0010F481D9,UniRef50_Q48660,UniRef90_A0A4Q9WQ04 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 143794 144714 . + . GCA_005502385.1_01603_gene GCA_005502385.1_01603 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKHLNTSITFYMSILFTTIFMGSSFPTGKYLISNEHVPPMLLGGWRFVIAGSMMLILTFTRKGKRAILPTSKGNSYKGFILVFVIGFLQTAGTMGLLNLAMAFGVSSSISSILLFTNPLWLAFLAHFILDERLTKIKITSLILGVFGVGLCLGLDETLFGWGTLFALAGSLCWSINTIVTKKVVFDKGPWVLTGWQLLFGGMFMLIMSLVLKEHYTLSSLNHWGWIWFFWLIIPASVGSFGLWFYSLSQRGATTASSFLFLVPLFSTLFSIIGLREPFTLHLILGGLCVVVALILIHRQPRENIL . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 143794 144714 . + . GCA_005502385.1_01603_mRNA GCA_005502385.1_01603 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKHLNTSITFYMSILFTTIFMGSSFPTGKYLISNEHVPPMLLGGWRFVIAGSMMLILTFTRKGKRAILPTSKGNSYKGFILVFVIGFLQTAGTMGLLNLAMAFGVSSSISSILLFTNPLWLAFLAHFILDERLTKIKITSLILGVFGVGLCLGLDETLFGWGTLFALAGSLCWSINTIVTKKVVFDKGPWVLTGWQLLFGGMFMLIMSLVLKEHYTLSSLNHWGWIWFFWLIIPASVGSFGLWFYSLSQRGATTASSFLFLVPLFSTLFSIIGLREPFTLHLILGGLCVVVALILIHRQPRENIL . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 143794 144714 . + 0 GCA_005502385.1_01603 GCA_005502385.1_01603_gene,GCA_005502385.1_01603_mRNA GCA_005502385.1_01603 putative cystine transporter YijE GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKKHLNTSITFYMSILFTTIFMGSSFPTGKYLISNEHVPPMLLGGWRFVIAGSMMLILTFTRKGKRAILPTSKGNSYKGFILVFVIGFLQTAGTMGLLNLAMAFGVSSSISSILLFTNPLWLAFLAHFILDERLTKIKITSLILGVFGVGLCLGLDETLFGWGTLFALAGSLCWSINTIVTKKVVFDKGPWVLTGWQLLFGGMFMLIMSLVLKEHYTLSSLNHWGWIWFFWLIIPASVGSFGLWFYSLSQRGATTASSFLFLVPLFSTLFSIIGLREPFTLHLILGGLCVVVALILIHRQPRENIL persistent 306 DMT family transporter WP_137689617.1 UPI0010F9A36C UniRef100_UPI0010F9A36C,UniRef50_A0A3S4K888,UniRef90_A0A3S7GVQ1 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 144952 146121 . + . GCA_005502385.1_01604_gene GCA_005502385.1_01604 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKDNRMMFFIFMLGTFTVGMAEYVVTGLLTQIAGDMKVSISSAGLLISVYAISVALIGPLMRVFTLKVRAQRLLPVLMAIFIISNIIGMLAPNFPILLLSRLLSASMHAPFFGVCMSVAAAVAPRGKKPQAIALVQAGLTIAVMIGVPFGSFLGGFANWRFVFGVMILLAVITMLGMMKFVPHVVLSTETSVKKELKVFKNPHILIVMAIIVFGYSGVFTTYTFMEPMIHKYAPFGIVGLTVCLFMFGLGGVVGNLLTGNVPEHKLTQYLFYTFVLLFITIVLFVTAVHSAILAIIICFLFGFGTFGTTPLLNSKVILSAHEAPLLASTLAASVFNIANFLGAIVGSILLSMGFPYLTITFVSGGIIILGIIINTINHLYEKKYVTFDY . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 144952 146121 . + . GCA_005502385.1_01604_mRNA GCA_005502385.1_01604 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKDNRMMFFIFMLGTFTVGMAEYVVTGLLTQIAGDMKVSISSAGLLISVYAISVALIGPLMRVFTLKVRAQRLLPVLMAIFIISNIIGMLAPNFPILLLSRLLSASMHAPFFGVCMSVAAAVAPRGKKPQAIALVQAGLTIAVMIGVPFGSFLGGFANWRFVFGVMILLAVITMLGMMKFVPHVVLSTETSVKKELKVFKNPHILIVMAIIVFGYSGVFTTYTFMEPMIHKYAPFGIVGLTVCLFMFGLGGVVGNLLTGNVPEHKLTQYLFYTFVLLFITIVLFVTAVHSAILAIIICFLFGFGTFGTTPLLNSKVILSAHEAPLLASTLAASVFNIANFLGAIVGSILLSMGFPYLTITFVSGGIIILGIIINTINHLYEKKYVTFDY . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 144952 146121 . + 0 GCA_005502385.1_01604 GCA_005502385.1_01604_gene,GCA_005502385.1_01604_mRNA GCA_005502385.1_01604 Inner membrane transport protein YdhP GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKDNRMMFFIFMLGTFTVGMAEYVVTGLLTQIAGDMKVSISSAGLLISVYAISVALIGPLMRVFTLKVRAQRLLPVLMAIFIISNIIGMLAPNFPILLLSRLLSASMHAPFFGVCMSVAAAVAPRGKKPQAIALVQAGLTIAVMIGVPFGSFLGGFANWRFVFGVMILLAVITMLGMMKFVPHVVLSTETSVKKELKVFKNPHILIVMAIIVFGYSGVFTTYTFMEPMIHKYAPFGIVGLTVCLFMFGLGGVVGNLLTGNVPEHKLTQYLFYTFVLLFITIVLFVTAVHSAILAIIICFLFGFGTFGTTPLLNSKVILSAHEAPLLASTLAASVFNIANFLGAIVGSILLSMGFPYLTITFVSGGIIILGIIINTINHLYEKKYVTFDY persistent 389 MFS transporter UniRef50_A0A4U9TB81,UniRef90_A0A3S7GVY8 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 146187 147728 . - . GCA_005502385.1_01605_gene GCA_005502385.1_01605 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTQLSFYIVSDIHGYIFPTDFSKRNQNLPMGLLKVNQLIEQERQHDDYSFKIDNGDFLQGSPLCHYLATEEQSSQPLTDIYNRLNFDFGTLGNHEFNYGLPYLQNTLNHLHHPILCANIFDHNNAPLTGQGVNYFKRGDITIGVIGLTTQFIPNWEQPAHIKGLTFNSAVETLKCILPDVRKKSDVVVVSYHGGFERSLDTDIPTEELTGENEGSDILERFHKDIDVLITGHQHRDIAMIKNDTAIIQPGTRGTEFGKVTLTLDYEHRITDKQSTLVSVPSHLSLTLSNNDHSLLNKLEDWLDTDITTLSEPMLVTHQFEARTHPHSLINLINYILLEKSGADIASTALFDSAKGFNQQVTMRDIINNYPFPNTFQVLELNGKGIKAALEKSASYFSVNDNNEITVSDTFLSPKPQHFNYDMYGGISYTIHAGAPVGQRVSDIKVGASPLEDTKTYTICVNNYRAVGGGDYKMFAEAPVVKDIQEEGAQVLIDYMTQHNVSYIPQVVNFKVII . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 146187 147728 . - . GCA_005502385.1_01605_mRNA GCA_005502385.1_01605 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTQLSFYIVSDIHGYIFPTDFSKRNQNLPMGLLKVNQLIEQERQHDDYSFKIDNGDFLQGSPLCHYLATEEQSSQPLTDIYNRLNFDFGTLGNHEFNYGLPYLQNTLNHLHHPILCANIFDHNNAPLTGQGVNYFKRGDITIGVIGLTTQFIPNWEQPAHIKGLTFNSAVETLKCILPDVRKKSDVVVVSYHGGFERSLDTDIPTEELTGENEGSDILERFHKDIDVLITGHQHRDIAMIKNDTAIIQPGTRGTEFGKVTLTLDYEHRITDKQSTLVSVPSHLSLTLSNNDHSLLNKLEDWLDTDITTLSEPMLVTHQFEARTHPHSLINLINYILLEKSGADIASTALFDSAKGFNQQVTMRDIINNYPFPNTFQVLELNGKGIKAALEKSASYFSVNDNNEITVSDTFLSPKPQHFNYDMYGGISYTIHAGAPVGQRVSDIKVGASPLEDTKTYTICVNNYRAVGGGDYKMFAEAPVVKDIQEEGAQVLIDYMTQHNVSYIPQVVNFKVII . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 146187 147728 . - 0 GCA_005502385.1_01605 GCA_005502385.1_01605_gene,GCA_005502385.1_01605_mRNA GCA_005502385.1_01605 Trifunctional nucleotide phosphoesterase protein YfkN GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTQLSFYIVSDIHGYIFPTDFSKRNQNLPMGLLKVNQLIEQERQHDDYSFKIDNGDFLQGSPLCHYLATEEQSSQPLTDIYNRLNFDFGTLGNHEFNYGLPYLQNTLNHLHHPILCANIFDHNNAPLTGQGVNYFKRGDITIGVIGLTTQFIPNWEQPAHIKGLTFNSAVETLKCILPDVRKKSDVVVVSYHGGFERSLDTDIPTEELTGENEGSDILERFHKDIDVLITGHQHRDIAMIKNDTAIIQPGTRGTEFGKVTLTLDYEHRITDKQSTLVSVPSHLSLTLSNNDHSLLNKLEDWLDTDITTLSEPMLVTHQFEARTHPHSLINLINYILLEKSGADIASTALFDSAKGFNQQVTMRDIINNYPFPNTFQVLELNGKGIKAALEKSASYFSVNDNNEITVSDTFLSPKPQHFNYDMYGGISYTIHAGAPVGQRVSDIKVGASPLEDTKTYTICVNNYRAVGGGDYKMFAEAPVVKDIQEEGAQVLIDYMTQHNVSYIPQVVNFKVII persistent 513 Bifunctional metallophosphatase/5'-nucleotidase WP_049420273.1 UPI00066B633A UniRef100_UPI00066B633A,UniRef50_A0A390ZG35,UniRef90_A0A3S7GYL8 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 147828 149465 . - . GCA_005502385.1_01606_gene GCA_005502385.1_01606 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKWIKVLSSTILASAITLSATPISHAAPNQTTTQTVAFDASHGQTAGAADWVIDGGFSDYADSMRQQDYTVKQIDGESNITPNTLHGINILVLPEANIPFKKREQQAMLNFVEKGGNIIFISDHYNADRNLNRFDSSEVMNGYRRGAYQDIIKDLTNEEKHSKAMRNVKSSDWLSEHFGVRFRYNALGDLNTQNIVSSSDSFGITEGVHSVSMHAGSTLAITDPTKAKGIIFLPDHLSQKQRWSHAVDQGIYNGGGIAEGPYVAISKVGKGKAAFIGDSSLVEDSTPKYVREDNGRTKKTYDGFKEQDNSKLLENITTWFGKQDHTPNLKETGIKLDQPTPLLNFEQPQHSTEPEKEPWSQPPTGYKWYDRSTFKLGSYGSTSSQLNSKHRNHGSHNDNNKANSTEDNTTENNHSQEDTNTSQSSQDTTTSNSMISSNNVQFHLPDNVSVNQPFNIQVELTNMAKNTTIDHLKLGIYQDGGRQLARFSQDGQTYDTVGYSQEQSVTTDDQGNATLTFTAKTSEPISGANIRLKQGSKTLATGSIQ . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 147828 149465 . - . GCA_005502385.1_01606_mRNA GCA_005502385.1_01606 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKWIKVLSSTILASAITLSATPISHAAPNQTTTQTVAFDASHGQTAGAADWVIDGGFSDYADSMRQQDYTVKQIDGESNITPNTLHGINILVLPEANIPFKKREQQAMLNFVEKGGNIIFISDHYNADRNLNRFDSSEVMNGYRRGAYQDIIKDLTNEEKHSKAMRNVKSSDWLSEHFGVRFRYNALGDLNTQNIVSSSDSFGITEGVHSVSMHAGSTLAITDPTKAKGIIFLPDHLSQKQRWSHAVDQGIYNGGGIAEGPYVAISKVGKGKAAFIGDSSLVEDSTPKYVREDNGRTKKTYDGFKEQDNSKLLENITTWFGKQDHTPNLKETGIKLDQPTPLLNFEQPQHSTEPEKEPWSQPPTGYKWYDRSTFKLGSYGSTSSQLNSKHRNHGSHNDNNKANSTEDNTTENNHSQEDTNTSQSSQDTTTSNSMISSNNVQFHLPDNVSVNQPFNIQVELTNMAKNTTIDHLKLGIYQDGGRQLARFSQDGQTYDTVGYSQEQSVTTDDQGNATLTFTAKTSEPISGANIRLKQGSKTLATGSIQ . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 147828 149465 . - 0 GCA_005502385.1_01606 GCA_005502385.1_01606_gene,GCA_005502385.1_01606_mRNA GCA_005502385.1_01606 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKWIKVLSSTILASAITLSATPISHAAPNQTTTQTVAFDASHGQTAGAADWVIDGGFSDYADSMRQQDYTVKQIDGESNITPNTLHGINILVLPEANIPFKKREQQAMLNFVEKGGNIIFISDHYNADRNLNRFDSSEVMNGYRRGAYQDIIKDLTNEEKHSKAMRNVKSSDWLSEHFGVRFRYNALGDLNTQNIVSSSDSFGITEGVHSVSMHAGSTLAITDPTKAKGIIFLPDHLSQKQRWSHAVDQGIYNGGGIAEGPYVAISKVGKGKAAFIGDSSLVEDSTPKYVREDNGRTKKTYDGFKEQDNSKLLENITTWFGKQDHTPNLKETGIKLDQPTPLLNFEQPQHSTEPEKEPWSQPPTGYKWYDRSTFKLGSYGSTSSQLNSKHRNHGSHNDNNKANSTEDNTTENNHSQEDTNTSQSSQDTTTSNSMISSNNVQFHLPDNVSVNQPFNIQVELTNMAKNTTIDHLKLGIYQDGGRQLARFSQDGQTYDTVGYSQEQSVTTDDQGNATLTFTAKTSEPISGANIRLKQGSKTLATGSIQ persistent 545 DNA-binding protein WP_049420270.1 UPI00066BDCA6 UniRef100_UPI00066BDCA6,UniRef50_Q2G1L6,UniRef90_A0AAE5JL39 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 149716 150678 . + . GCA_005502385.1_01607_gene GCA_005502385.1_01607 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKQLKYLLVLALSVIIFAAACGNNSSLDNNKSSNSDGGSGSSKDGYTPKELTVQFVPSQNADTLEAKAKPLEKLLSKKLGIPVKVSVSTNYNTIVEAMKSKKVDVGFLPPTAYTLAHDQKAADLLLQAQRYGVNEDGSSNKKLVKDYKSEILVKKNSGINSLKDLKGKKIALQDVTSTAGYTFPIATIKKDAGIDATKDMKIVNMKGHDQAVISLLNGDVDAAAVFQDARNIVKKDQPNVFKDTKILKLTKPIPNDTISVRPDMNKDFQDKLKKAFKDISKTKEGHKIISEVYSHEGYTDAKDSDFDIVRKYEKEVQDMK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 149716 150678 . + . GCA_005502385.1_01607_mRNA GCA_005502385.1_01607 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKQLKYLLVLALSVIIFAAACGNNSSLDNNKSSNSDGGSGSSKDGYTPKELTVQFVPSQNADTLEAKAKPLEKLLSKKLGIPVKVSVSTNYNTIVEAMKSKKVDVGFLPPTAYTLAHDQKAADLLLQAQRYGVNEDGSSNKKLVKDYKSEILVKKNSGINSLKDLKGKKIALQDVTSTAGYTFPIATIKKDAGIDATKDMKIVNMKGHDQAVISLLNGDVDAAAVFQDARNIVKKDQPNVFKDTKILKLTKPIPNDTISVRPDMNKDFQDKLKKAFKDISKTKEGHKIISEVYSHEGYTDAKDSDFDIVRKYEKEVQDMK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 149716 150678 . + 0 GCA_005502385.1_01607 GCA_005502385.1_01607_gene,GCA_005502385.1_01607_mRNA GCA_005502385.1_01607 putative ABC transporter phosphonate/phosphite binding protein PhnD2 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MKQLKYLLVLALSVIIFAAACGNNSSLDNNKSSNSDGGSGSSKDGYTPKELTVQFVPSQNADTLEAKAKPLEKLLSKKLGIPVKVSVSTNYNTIVEAMKSKKVDVGFLPPTAYTLAHDQKAADLLLQAQRYGVNEDGSSNKKLVKDYKSEILVKKNSGINSLKDLKGKKIALQDVTSTAGYTFPIATIKKDAGIDATKDMKIVNMKGHDQAVISLLNGDVDAAAVFQDARNIVKKDQPNVFKDTKILKLTKPIPNDTISVRPDMNKDFQDKLKKAFKDISKTKEGHKIISEVYSHEGYTDAKDSDFDIVRKYEKEVQDMK persistent 320 phnD Phosphate/phosphite/phosphonate ABC transporter substrate-binding protein COG3221,P WP_048680905.1 UPI00065F796E UniRef100_UPI00065F796E,UniRef50_D3EDC2,UniRef90_A0A4Z1AXX9 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 150819 151592 . + . GCA_005502385.1_01608_gene GCA_005502385.1_01608 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSQIEFKNVSKIYPNGHVGLKDINLNIEKGDFAVIVGLSGAGKSTLLRSVNRLHDITSGDITIEGKSITKAKGKELLMMRRNIGMIFQHFNLVKRSTVLRNVLSGRVGYHPTWKMVLGLFPKEDKIKAMDALERVNILDKYDQRSDELSGGQQQRISIARALAQEPAIILADEPVASLDPLTTKQVMDDLKKINEELGITILINLHFVDLALEYGTRIIGLRAGELVYDGPTSEANEDVFNEIYGRKLNDDEKLGVE . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 150819 151592 . + . GCA_005502385.1_01608_mRNA GCA_005502385.1_01608 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSQIEFKNVSKIYPNGHVGLKDINLNIEKGDFAVIVGLSGAGKSTLLRSVNRLHDITSGDITIEGKSITKAKGKELLMMRRNIGMIFQHFNLVKRSTVLRNVLSGRVGYHPTWKMVLGLFPKEDKIKAMDALERVNILDKYDQRSDELSGGQQQRISIARALAQEPAIILADEPVASLDPLTTKQVMDDLKKINEELGITILINLHFVDLALEYGTRIIGLRAGELVYDGPTSEANEDVFNEIYGRKLNDDEKLGVE . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 150819 151592 . + 0 GCA_005502385.1_01608 GCA_005502385.1_01608_gene,GCA_005502385.1_01608_mRNA GCA_005502385.1_01608 Phosphate-import ATP-binding protein PhnC GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MSQIEFKNVSKIYPNGHVGLKDINLNIEKGDFAVIVGLSGAGKSTLLRSVNRLHDITSGDITIEGKSITKAKGKELLMMRRNIGMIFQHFNLVKRSTVLRNVLSGRVGYHPTWKMVLGLFPKEDKIKAMDALERVNILDKYDQRSDELSGGQQQRISIARALAQEPAIILADEPVASLDPLTTKQVMDDLKKINEELGITILINLHFVDLALEYGTRIIGLRAGELVYDGPTSEANEDVFNEIYGRKLNDDEKLGVE persistent 257 phnC phosphonate ABC transporter ATP-binding protein 7.3.2.2 GO:0005524,GO:0005886,GO:0015416,GO:0015716,GO:0016020,GO:0016887 COG3638,P WP_048680901.1 UPI000660068C UniRef100_UPI000660068C,UniRef50_Q2G1L8,UniRef90_Q4L9P7 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 151594 152394 . + . GCA_005502385.1_01609_gene GCA_005502385.1_01609 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MATPTTSKYDQYLNKKFSFKTSLTLFLVIALVVWSFLYTGFSFSDLMVGIPQIGSFFGQMVPPDWSYLNTITKPMLDTIRMAIVGTFLGSIVSIPVALLCASNIVKTKWITIPSRFILNIVRTIPDLLLAAVFVAVFGIGQIPGVLALFILTICVIAKLFYESLETIDPGPMEAMTAVGANKTKWIMFGVVPQTMSTFLSYVLFAFEINIRASAVLGLVGAGGIGLFYDSTLGLFQYPKTAMIILFTLVIVVIIDYVSSKVRERLA . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 151594 152394 . + . GCA_005502385.1_01609_mRNA GCA_005502385.1_01609 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MATPTTSKYDQYLNKKFSFKTSLTLFLVIALVVWSFLYTGFSFSDLMVGIPQIGSFFGQMVPPDWSYLNTITKPMLDTIRMAIVGTFLGSIVSIPVALLCASNIVKTKWITIPSRFILNIVRTIPDLLLAAVFVAVFGIGQIPGVLALFILTICVIAKLFYESLETIDPGPMEAMTAVGANKTKWIMFGVVPQTMSTFLSYVLFAFEINIRASAVLGLVGAGGIGLFYDSTLGLFQYPKTAMIILFTLVIVVIIDYVSSKVRERLA . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 151594 152394 . + 0 GCA_005502385.1_01609 GCA_005502385.1_01609_gene,GCA_005502385.1_01609_mRNA GCA_005502385.1_01609 Phosphate-import permease protein PhnE GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MATPTTSKYDQYLNKKFSFKTSLTLFLVIALVVWSFLYTGFSFSDLMVGIPQIGSFFGQMVPPDWSYLNTITKPMLDTIRMAIVGTFLGSIVSIPVALLCASNIVKTKWITIPSRFILNIVRTIPDLLLAAVFVAVFGIGQIPGVLALFILTICVIAKLFYESLETIDPGPMEAMTAVGANKTKWIMFGVVPQTMSTFLSYVLFAFEINIRASAVLGLVGAGGIGLFYDSTLGLFQYPKTAMIILFTLVIVVIIDYVSSKVRERLA persistent 266 phnE phosphonate ABC transporter, permease protein PhnE 7.3.2.2 GO:0005886,GO:0015416,GO:0015716,GO:0055052 WP_048680895.1 UPI000660C3B8 UniRef100_UPI000660C3B8,UniRef50_E3EAH8,UniRef90_A0A3S7GZ61 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 152391 153218 . + . GCA_005502385.1_01610_gene GCA_005502385.1_01610 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTQEQHQLEKKYPVRSKEHKQRMIKHWLITIVVLAIIVWGFAGMPALELKSKSIEILKSIFNGLFHPDWDYVYIPAGEDLLRGLLETFAIAVIGTFIAAVICIPFAFLGARNLVKVRPVTGITKFILSVIRVFPEIVMALIFIKAVGPGSFSGVLALGIHSVGMLGKLFIEDIESLDFSSAEALKASGANKTKTLVFAVIPQILPSFLSLILYRFELNLRSASILGLIGAGGIGTPLIFALQTRSWDRVGIILIGLVIMVAIVDFISGAIRKRIV . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 152391 153218 . + . GCA_005502385.1_01610_mRNA GCA_005502385.1_01610 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTQEQHQLEKKYPVRSKEHKQRMIKHWLITIVVLAIIVWGFAGMPALELKSKSIEILKSIFNGLFHPDWDYVYIPAGEDLLRGLLETFAIAVIGTFIAAVICIPFAFLGARNLVKVRPVTGITKFILSVIRVFPEIVMALIFIKAVGPGSFSGVLALGIHSVGMLGKLFIEDIESLDFSSAEALKASGANKTKTLVFAVIPQILPSFLSLILYRFELNLRSASILGLIGAGGIGTPLIFALQTRSWDRVGIILIGLVIMVAIVDFISGAIRKRIV . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 152391 153218 . + 0 GCA_005502385.1_01610 GCA_005502385.1_01610_gene,GCA_005502385.1_01610_mRNA GCA_005502385.1_01610 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MTQEQHQLEKKYPVRSKEHKQRMIKHWLITIVVLAIIVWGFAGMPALELKSKSIEILKSIFNGLFHPDWDYVYIPAGEDLLRGLLETFAIAVIGTFIAAVICIPFAFLGARNLVKVRPVTGITKFILSVIRVFPEIVMALIFIKAVGPGSFSGVLALGIHSVGMLGKLFIEDIESLDFSSAEALKASGANKTKTLVFAVIPQILPSFLSLILYRFELNLRSASILGLIGAGGIGTPLIFALQTRSWDRVGIILIGLVIMVAIVDFISGAIRKRIV persistent 275 phnE phosphonate ABC transporter, permease protein PhnE 7.3.2.2 GO:0005886,GO:0015416,GO:0015716,GO:0055052 WP_017175496.1 UPI0003131ADB UniRef100_A0A3S7GVG4,UniRef50_A0A7Z1N8X5,UniRef90_A0A3S7GVG4 . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka gene 153361 153708 . - . GCA_005502385.1_01611_gene GCA_005502385.1_01611 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MGFNGYAEQNGLVKQAPKSNSQQDSAKHQAEDNDMGFNGYVEKHHLIKQQDQSTKSQMNSPLIKQATRSQQASQTSLHHELPMTGERTSTTPFVYSLIAFILGVGVISLRRKFSK . . . . . . . GCA_005502385.1|SCOV01000004.1 prokka mRNA 153361 153708 . - . GCA_005502385.1_01611_mRNA GCA_005502385.1_01611 GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MGFNGYAEQNGLVKQAPKSNSQQDSAKHQAEDNDMGFNGYVEKHHLIKQQDQSTKSQMNSPLIKQATRSQQASQTSLHHELPMTGERTSTTPFVYSLIAFILGVGVISLRRKFSK . . . . . . . GCA_005502385.1|SCOV01000004.1 Prodigal:002006 CDS 153361 153708 . - 0 GCA_005502385.1_01611 GCA_005502385.1_01611_gene,GCA_005502385.1_01611_mRNA GCA_005502385.1_01611 hypothetical protein GCA_005502385.1 SCOV01000004.1 GCA_005502385.1|SCOV01000004.1 GCA_005502385.1_SCOV01000004.1 MGFNGYAEQNGLVKQAPKSNSQQDSAKHQAEDNDMGFNGYVEKHHLIKQQDQSTKSQMNSPLIKQATRSQQASQTSLHHELPMTGERTSTTPFVYSLIAFILGVGVISLRRKFSK cloud 115 LPXTG cell wall anchor domain-containing protein UniRef50_UPI0028A45578 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 1 191 . + . GCA_005502385.1_01612_gene GCA_005502385.1_01612 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 1 191 . + . GCA_005502385.1_01612_mRNA GCA_005502385.1_01612 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 . . . . . . . GCA_005502385.1|SCOV01000005.1 Infernal:001001 misc_RNA 1 191 102.9 + . GCA_005502385.1_01612 GCA_005502385.1_01612_gene,GCA_005502385.1_01612_mRNA GCA_005502385.1_01612 tsr24 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 426 1763 . + . GCA_005502385.1_01613_gene GCA_005502385.1_01613 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSKAEDMIKEESKYFATSGRIKYYPLVIDHGYGATLVDIDGKEYIDLLASASSQNVGHAPQQVAEAIKKQVDKFIHYTPAYMYHEPLVKLSKKLCDIAPGDYEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTFGALSMSAISLNMRKHYGPLLNGFYHIPFPDKYRGIFEQSKSNTVEEYLAPLKEMFAKYVPAEEVACIVLETIQGDGGLLEPVEGYFEALEALCREYGILIAVDDIQQGLGRTGSWSSVDHFNFTPDLITFGKSLAGGLPMSAIVGRKEIIESLEAPAHLFTTGANPVSCEAALATIEMIENDDLLTASSEKGNYVRQRMNQWVDQYDYVGDVRGIGLSIGIDIVKDKQSKERAAEEALKICNYCFEHGVVIIAVAGNVLRFQPPLVITYEQLDKALDVIEEALQALQDGNLNQYSIEGQGW . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 426 1763 . + . GCA_005502385.1_01613_mRNA GCA_005502385.1_01613 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSKAEDMIKEESKYFATSGRIKYYPLVIDHGYGATLVDIDGKEYIDLLASASSQNVGHAPQQVAEAIKKQVDKFIHYTPAYMYHEPLVKLSKKLCDIAPGDYEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTFGALSMSAISLNMRKHYGPLLNGFYHIPFPDKYRGIFEQSKSNTVEEYLAPLKEMFAKYVPAEEVACIVLETIQGDGGLLEPVEGYFEALEALCREYGILIAVDDIQQGLGRTGSWSSVDHFNFTPDLITFGKSLAGGLPMSAIVGRKEIIESLEAPAHLFTTGANPVSCEAALATIEMIENDDLLTASSEKGNYVRQRMNQWVDQYDYVGDVRGIGLSIGIDIVKDKQSKERAAEEALKICNYCFEHGVVIIAVAGNVLRFQPPLVITYEQLDKALDVIEEALQALQDGNLNQYSIEGQGW . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 426 1763 . + 0 GCA_005502385.1_01613 GCA_005502385.1_01613_gene,GCA_005502385.1_01613_mRNA GCA_005502385.1_01613 Isoleucine 2-epimerase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSKAEDMIKEESKYFATSGRIKYYPLVIDHGYGATLVDIDGKEYIDLLASASSQNVGHAPQQVAEAIKKQVDKFIHYTPAYMYHEPLVKLSKKLCDIAPGDYEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTFGALSMSAISLNMRKHYGPLLNGFYHIPFPDKYRGIFEQSKSNTVEEYLAPLKEMFAKYVPAEEVACIVLETIQGDGGLLEPVEGYFEALEALCREYGILIAVDDIQQGLGRTGSWSSVDHFNFTPDLITFGKSLAGGLPMSAIVGRKEIIESLEAPAHLFTTGANPVSCEAALATIEMIENDDLLTASSEKGNYVRQRMNQWVDQYDYVGDVRGIGLSIGIDIVKDKQSKERAAEEALKICNYCFEHGVVIIAVAGNVLRFQPPLVITYEQLDKALDVIEEALQALQDGNLNQYSIEGQGW persistent 445 aspartate aminotransferase family protein GO:0008483 WP_049419639.1 UPI00066BCDE4 UniRef100_UPI00066BCDE4,UniRef50_Q2G1Y4,UniRef90_A0A974L0Z1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 1891 3342 . - . GCA_005502385.1_01614_gene GCA_005502385.1_01614 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MASFFKNFTRKEDPTIYQSKDGHLKRTLRVKDFLALGVGTIVSTSIFTLPGVVAAEHAGPAVALSFLLAAIVAGLVAFSYAEMAAAMPFAGSAYSWINVLFGEFFGWVAGWALLAEYFIAVAFVASGFSANLRGLVSPLGIALPKSLSNPFGANGGIIDLVAAIVIILTALLLSRGMSEAARIENILVILKVLAIVLFVIVGLTAIQASNYVPFIPEHKVTETGDFGGWQGIYAGVSMIFLAYIGFDSIAANSAEAINPQKTMPRGILGSLIIAIVLFVAVALVLVGMFHYSKYAGNAEPVGWALRQSGHGVVAAVVQAISVIGMFTALIGMMLAGSRLLYSFGRDGLLPSWLAKLNDKHLPNRALVILTVIGVLIGSMFPFAFLAQLISAGTLIAFMFVSIAMYSLRKREGKDLPVPAFKVPFFPVLPVITFLLVLLVFWGLSFEAKLYTLIWFLVGIVIYVFYGIKHSKKNDEDDYVIPKD . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 1891 3342 . - . GCA_005502385.1_01614_mRNA GCA_005502385.1_01614 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MASFFKNFTRKEDPTIYQSKDGHLKRTLRVKDFLALGVGTIVSTSIFTLPGVVAAEHAGPAVALSFLLAAIVAGLVAFSYAEMAAAMPFAGSAYSWINVLFGEFFGWVAGWALLAEYFIAVAFVASGFSANLRGLVSPLGIALPKSLSNPFGANGGIIDLVAAIVIILTALLLSRGMSEAARIENILVILKVLAIVLFVIVGLTAIQASNYVPFIPEHKVTETGDFGGWQGIYAGVSMIFLAYIGFDSIAANSAEAINPQKTMPRGILGSLIIAIVLFVAVALVLVGMFHYSKYAGNAEPVGWALRQSGHGVVAAVVQAISVIGMFTALIGMMLAGSRLLYSFGRDGLLPSWLAKLNDKHLPNRALVILTVIGVLIGSMFPFAFLAQLISAGTLIAFMFVSIAMYSLRKREGKDLPVPAFKVPFFPVLPVITFLLVLLVFWGLSFEAKLYTLIWFLVGIVIYVFYGIKHSKKNDEDDYVIPKD . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 1891 3342 . - 0 GCA_005502385.1_01614 GCA_005502385.1_01614_gene,GCA_005502385.1_01614_mRNA GCA_005502385.1_01614 putative amino acid permease YhdG GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MASFFKNFTRKEDPTIYQSKDGHLKRTLRVKDFLALGVGTIVSTSIFTLPGVVAAEHAGPAVALSFLLAAIVAGLVAFSYAEMAAAMPFAGSAYSWINVLFGEFFGWVAGWALLAEYFIAVAFVASGFSANLRGLVSPLGIALPKSLSNPFGANGGIIDLVAAIVIILTALLLSRGMSEAARIENILVILKVLAIVLFVIVGLTAIQASNYVPFIPEHKVTETGDFGGWQGIYAGVSMIFLAYIGFDSIAANSAEAINPQKTMPRGILGSLIIAIVLFVAVALVLVGMFHYSKYAGNAEPVGWALRQSGHGVVAAVVQAISVIGMFTALIGMMLAGSRLLYSFGRDGLLPSWLAKLNDKHLPNRALVILTVIGVLIGSMFPFAFLAQLISAGTLIAFMFVSIAMYSLRKREGKDLPVPAFKVPFFPVLPVITFLLVLLVFWGLSFEAKLYTLIWFLVGIVIYVFYGIKHSKKNDEDDYVIPKD persistent 483 Amino acid permease WP_048682751.1 UPI0006610CB0 UniRef100_UPI0006610CB0,UniRef50_A2RHI9,UniRef90_A0A3S7GW17 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 4082 5746 . + . GCA_005502385.1_01615_gene GCA_005502385.1_01615 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAKENYSAADMVIDTLKNNNVDYVFGIPGAKIDYLFDALEDDGPELIVTRHEQNAAMMAQGIGRLTGKPGVALVTSGPGVSNLTTGLLTATSEGDPVLAIGGQVKRNDLLRLTHQAVDNAALLKSSTKYSAEVQDPESLSEVMTNAIRTATSGKNGASFISIPQDVISSQVQSKAIDLPEKPHLGVPTDEEVNEVLQAIKDAKFPVLLAGMRSSSEKETEAIRKFVEKTSLPVVETFQGAGVISRELEDHFFGRVGLFRNQVGDELLRKADLVVAIGYDPIEYEASNWNKELDTEIISIDEVHAEITNYLRPKKELVGNIAGTIQMMSEKVSEPIIDQKHLDDLEELRANIIEATGIKYEHEDGILHPVEIINTMQKTLTDDTTVTVDVGSHYIWMARKFRSYNPRHLLFSNGMQTLGVALPWAIAAALVRPNTQVVSVAGDGGFLFSGQDLETAVRKKLNIIQLIWNDGKYNMVEFQEEMKYKRAAGVAFGPVDYVKYAESFGAKGIRVTSPEELEAAIKEGYETEGPVLIDIPVNYKDNIKLSTNMLPDSLN . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 4082 5746 . + . GCA_005502385.1_01615_mRNA GCA_005502385.1_01615 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAKENYSAADMVIDTLKNNNVDYVFGIPGAKIDYLFDALEDDGPELIVTRHEQNAAMMAQGIGRLTGKPGVALVTSGPGVSNLTTGLLTATSEGDPVLAIGGQVKRNDLLRLTHQAVDNAALLKSSTKYSAEVQDPESLSEVMTNAIRTATSGKNGASFISIPQDVISSQVQSKAIDLPEKPHLGVPTDEEVNEVLQAIKDAKFPVLLAGMRSSSEKETEAIRKFVEKTSLPVVETFQGAGVISRELEDHFFGRVGLFRNQVGDELLRKADLVVAIGYDPIEYEASNWNKELDTEIISIDEVHAEITNYLRPKKELVGNIAGTIQMMSEKVSEPIIDQKHLDDLEELRANIIEATGIKYEHEDGILHPVEIINTMQKTLTDDTTVTVDVGSHYIWMARKFRSYNPRHLLFSNGMQTLGVALPWAIAAALVRPNTQVVSVAGDGGFLFSGQDLETAVRKKLNIIQLIWNDGKYNMVEFQEEMKYKRAAGVAFGPVDYVKYAESFGAKGIRVTSPEELEAAIKEGYETEGPVLIDIPVNYKDNIKLSTNMLPDSLN . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 4082 5746 . + 0 GCA_005502385.1_01615 GCA_005502385.1_01615_gene,GCA_005502385.1_01615_mRNA GCA_005502385.1_01615 Acetolactate synthase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAKENYSAADMVIDTLKNNNVDYVFGIPGAKIDYLFDALEDDGPELIVTRHEQNAAMMAQGIGRLTGKPGVALVTSGPGVSNLTTGLLTATSEGDPVLAIGGQVKRNDLLRLTHQAVDNAALLKSSTKYSAEVQDPESLSEVMTNAIRTATSGKNGASFISIPQDVISSQVQSKAIDLPEKPHLGVPTDEEVNEVLQAIKDAKFPVLLAGMRSSSEKETEAIRKFVEKTSLPVVETFQGAGVISRELEDHFFGRVGLFRNQVGDELLRKADLVVAIGYDPIEYEASNWNKELDTEIISIDEVHAEITNYLRPKKELVGNIAGTIQMMSEKVSEPIIDQKHLDDLEELRANIIEATGIKYEHEDGILHPVEIINTMQKTLTDDTTVTVDVGSHYIWMARKFRSYNPRHLLFSNGMQTLGVALPWAIAAALVRPNTQVVSVAGDGGFLFSGQDLETAVRKKLNIIQLIWNDGKYNMVEFQEEMKYKRAAGVAFGPVDYVKYAESFGAKGIRVTSPEELEAAIKEGYETEGPVLIDIPVNYKDNIKLSTNMLPDSLN persistent 554 alsS acetolactate synthase AlsS 2.2.1.6 GO:0000287,GO:0003984,GO:0030976,GO:0034077 WP_017175103.1 UPI0002DACDD6 UniRef100_A0A4V2KX75,UniRef50_Q04789,UniRef90_A0A4V2KX75 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 5775 6479 . + . GCA_005502385.1_01616_gene GCA_005502385.1_01616 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MGHVLYQHGTLGTLMAGLLEGTATIDELLKHGDSGLATLTGSDGEVIFINGEAYHANEKKEFVKLKGDELTPFATITKFEADESYETSNKDSETVLNEVKEHMLSDNLFSAVKITGKFKKMHVRMMPKQEPPYTRLIDSARRQPEETQEDVNGTVIGFFTPELFHGIGSGGFHIHFANDDRNFGGHILDFEVDDVKVEIQNFETFEQHFPIDNKTFTNTEIDYADIDAEIREAE . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 5775 6479 . + . GCA_005502385.1_01616_mRNA GCA_005502385.1_01616 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MGHVLYQHGTLGTLMAGLLEGTATIDELLKHGDSGLATLTGSDGEVIFINGEAYHANEKKEFVKLKGDELTPFATITKFEADESYETSNKDSETVLNEVKEHMLSDNLFSAVKITGKFKKMHVRMMPKQEPPYTRLIDSARRQPEETQEDVNGTVIGFFTPELFHGIGSGGFHIHFANDDRNFGGHILDFEVDDVKVEIQNFETFEQHFPIDNKTFTNTEIDYADIDAEIREAE . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 5775 6479 . + 0 GCA_005502385.1_01616 GCA_005502385.1_01616_gene,GCA_005502385.1_01616_mRNA GCA_005502385.1_01616 Alpha-acetolactate decarboxylase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MGHVLYQHGTLGTLMAGLLEGTATIDELLKHGDSGLATLTGSDGEVIFINGEAYHANEKKEFVKLKGDELTPFATITKFEADESYETSNKDSETVLNEVKEHMLSDNLFSAVKITGKFKKMHVRMMPKQEPPYTRLIDSARRQPEETQEDVNGTVIGFFTPELFHGIGSGGFHIHFANDDRNFGGHILDFEVDDVKVEIQNFETFEQHFPIDNKTFTNTEIDYADIDAEIREAE persistent 234 budA acetolactate decarboxylase 4.1.1.5 GO:0045151,GO:0047605 WP_002449310.1 UPI00019FC46F UniRef100_A0A1J6EI17,UniRef50_A0A641A785,UniRef90_A0A1J6EI17 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 6605 7537 . + . GCA_005502385.1_01617_gene GCA_005502385.1_01617 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MQCPNCGQSYQQGDLFCGECGTKLDQITPSTTTPESLNLDSHINKSVNHSTSSSVTSPNAISKEQPTVNQYNNIESSQTQDAPDYTSYQQRYGNPSASSQKVKSVVEESKKFFKQVFKRHDTIIESHHSFSYSLLASLVIVGLLILGFFIHFMIEDSFGYIVSGVFTIVLRVILGIAIAIAILFFITYGVIRLTVLQPFQIKKVLSDFILTNTLSVLILLLGFISLFLKLYILSGVLGVFSIILLFTSCIYLIAKYSVNRKLRIPSFYGVIIFFVIIGFALHLFGSSLISQFDDFGVLRRLFGRGFSGLL . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 6605 7537 . + . GCA_005502385.1_01617_mRNA GCA_005502385.1_01617 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MQCPNCGQSYQQGDLFCGECGTKLDQITPSTTTPESLNLDSHINKSVNHSTSSSVTSPNAISKEQPTVNQYNNIESSQTQDAPDYTSYQQRYGNPSASSQKVKSVVEESKKFFKQVFKRHDTIIESHHSFSYSLLASLVIVGLLILGFFIHFMIEDSFGYIVSGVFTIVLRVILGIAIAIAILFFITYGVIRLTVLQPFQIKKVLSDFILTNTLSVLILLLGFISLFLKLYILSGVLGVFSIILLFTSCIYLIAKYSVNRKLRIPSFYGVIIFFVIIGFALHLFGSSLISQFDDFGVLRRLFGRGFSGLL . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 6605 7537 . + 0 GCA_005502385.1_01617 GCA_005502385.1_01617_gene,GCA_005502385.1_01617_mRNA GCA_005502385.1_01617 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MQCPNCGQSYQQGDLFCGECGTKLDQITPSTTTPESLNLDSHINKSVNHSTSSSVTSPNAISKEQPTVNQYNNIESSQTQDAPDYTSYQQRYGNPSASSQKVKSVVEESKKFFKQVFKRHDTIIESHHSFSYSLLASLVIVGLLILGFFIHFMIEDSFGYIVSGVFTIVLRVILGIAIAIAILFFITYGVIRLTVLQPFQIKKVLSDFILTNTLSVLILLLGFISLFLKLYILSGVLGVFSIILLFTSCIYLIAKYSVNRKLRIPSFYGVIIFFVIIGFALHLFGSSLISQFDDFGVLRRLFGRGFSGLL persistent 310 Zinc ribbon domain-containing protein WP_017175102.1 UPI000309C60E UniRef100_A0A3S7GW16,UniRef50_A0A3S7GW16,UniRef90_A0A3S7GW16 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 7796 8512 . + . GCA_005502385.1_01618_gene GCA_005502385.1_01618 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MLNAEPMIKKMKNQKINYDRVLKKLINQWEREGVRPKILLHSCCAPCSTYTLEYLSQYADIAIYFANPNIHPKNEYLRRAKVQAQFVKEFNEKTGHSVKYIEADYQPYEFMKMAKSRGLTEEPEGGKRCTACFEMRLELVAEAAVKYGYDYFGSALTLSPKKNAQLINELGMEVQRLYNTYYLPSDFKKNKGYERSIEMCNDYNIFRQCYCGCVFAAMEQGIDFKKINREAKAFLEQF . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 7796 8512 . + . GCA_005502385.1_01618_mRNA GCA_005502385.1_01618 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MLNAEPMIKKMKNQKINYDRVLKKLINQWEREGVRPKILLHSCCAPCSTYTLEYLSQYADIAIYFANPNIHPKNEYLRRAKVQAQFVKEFNEKTGHSVKYIEADYQPYEFMKMAKSRGLTEEPEGGKRCTACFEMRLELVAEAAVKYGYDYFGSALTLSPKKNAQLINELGMEVQRLYNTYYLPSDFKKNKGYERSIEMCNDYNIFRQCYCGCVFAAMEQGIDFKKINREAKAFLEQF . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 7796 8512 . + 0 GCA_005502385.1_01618 GCA_005502385.1_01618_gene,GCA_005502385.1_01618_mRNA GCA_005502385.1_01618 Epoxyqueuosine reductase QueH GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MLNAEPMIKKMKNQKINYDRVLKKLINQWEREGVRPKILLHSCCAPCSTYTLEYLSQYADIAIYFANPNIHPKNEYLRRAKVQAQFVKEFNEKTGHSVKYIEADYQPYEFMKMAKSRGLTEEPEGGKRCTACFEMRLELVAEAAVKYGYDYFGSALTLSPKKNAQLINELGMEVQRLYNTYYLPSDFKKNKGYERSIEMCNDYNIFRQCYCGCVFAAMEQGIDFKKINREAKAFLEQF persistent 238 queH Epoxyqueuosine reductase QueH 1.17.99.6 WP_048680691.1 UPI00065F702C UniRef100_UPI00065F702C,UniRef50_Q9A1K3,UniRef90_A0A3S7GYR6 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 8565 8840 . - . GCA_005502385.1_01619_gene GCA_005502385.1_01619 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTIEDKQKELQTKDKNNIEDTKSSQEYDNSIGYNGEKKTALDLEIERELLEMMENKDPEPEKEKKGIKIAGLLSALVIAILAIVRFIHRTL . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 8565 8840 . - . GCA_005502385.1_01619_mRNA GCA_005502385.1_01619 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTIEDKQKELQTKDKNNIEDTKSSQEYDNSIGYNGEKKTALDLEIERELLEMMENKDPEPEKEKKGIKIAGLLSALVIAILAIVRFIHRTL . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 8565 8840 . - 0 GCA_005502385.1_01619 GCA_005502385.1_01619_gene,GCA_005502385.1_01619_mRNA GCA_005502385.1_01619 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTIEDKQKELQTKDKNNIEDTKSSQEYDNSIGYNGEKKTALDLEIERELLEMMENKDPEPEKEKKGIKIAGLLSALVIAILAIVRFIHRTL persistent 91 hypothetical protein WP_048680693.1 UPI0006604134 UniRef100_UPI0006604134,UniRef50_A0A2A1KEG8,UniRef90_A0A8X8GXH2 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 8912 9982 . - . GCA_005502385.1_01620_gene GCA_005502385.1_01620 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MYKLIKPLLFKIEPEKAHGLTVDALKFTQKNAFLLPFVNKLFTYEHPSLSQNIKGITFKNPVGLAAGFDKSCEVPKALENAGFGALELGGITPKPQDGNPKPRMYRLLEDDALINRMGFNNMGMNKALWNLRRHAYTIPVGLNVGVNKTTPYEERYQDYIKVIDAFKADVSFFTVNISSPNTENLQSFHDKDEFSMLCHALIDYKAQHEVNVPIFLKLTSDLELEGFKTILPQITETFDGMILANTTRQRDGLSSPNKVEDGGLSGRPLFKRNLELVKWAYQQTNGEFLIIGTGGIFSAQDTIQMMRNGASLVQIYSSLVIEGPGLTKKINRDIAKYLKANYYSHISEIIGLDARR . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 8912 9982 . - . GCA_005502385.1_01620_mRNA GCA_005502385.1_01620 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MYKLIKPLLFKIEPEKAHGLTVDALKFTQKNAFLLPFVNKLFTYEHPSLSQNIKGITFKNPVGLAAGFDKSCEVPKALENAGFGALELGGITPKPQDGNPKPRMYRLLEDDALINRMGFNNMGMNKALWNLRRHAYTIPVGLNVGVNKTTPYEERYQDYIKVIDAFKADVSFFTVNISSPNTENLQSFHDKDEFSMLCHALIDYKAQHEVNVPIFLKLTSDLELEGFKTILPQITETFDGMILANTTRQRDGLSSPNKVEDGGLSGRPLFKRNLELVKWAYQQTNGEFLIIGTGGIFSAQDTIQMMRNGASLVQIYSSLVIEGPGLTKKINRDIAKYLKANYYSHISEIIGLDARR . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 8912 9982 . - 0 GCA_005502385.1_01620 GCA_005502385.1_01620_gene,GCA_005502385.1_01620_mRNA GCA_005502385.1_01620 Dihydroorotate dehydrogenase (quinone) GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MYKLIKPLLFKIEPEKAHGLTVDALKFTQKNAFLLPFVNKLFTYEHPSLSQNIKGITFKNPVGLAAGFDKSCEVPKALENAGFGALELGGITPKPQDGNPKPRMYRLLEDDALINRMGFNNMGMNKALWNLRRHAYTIPVGLNVGVNKTTPYEERYQDYIKVIDAFKADVSFFTVNISSPNTENLQSFHDKDEFSMLCHALIDYKAQHEVNVPIFLKLTSDLELEGFKTILPQITETFDGMILANTTRQRDGLSSPNKVEDGGLSGRPLFKRNLELVKWAYQQTNGEFLIIGTGGIFSAQDTIQMMRNGASLVQIYSSLVIEGPGLTKKINRDIAKYLKANYYSHISEIIGLDARR persistent 356 quinone-dependent dihydroorotate dehydrogenase 1.3.5.2 WP_048680698.1 UPI000660E45A UniRef100_UPI000660E45A,UniRef50_Q2FV30,UniRef90_A0A3S7GVE7 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 10208 11062 . + . GCA_005502385.1_01621_gene GCA_005502385.1_01621 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKSYWKNQLPLEDIQDISPVSGGDVNEAFKITTNDDIYFLLVQRNRKPSFYAAEMAGLEAFEKADITAPRVIENGEINGDAYLLLSYLEEGGKGSQKELGQLVAKMHSHQQSEGKFGFELPYEGADVSFDNTWSESWSEIFVERRMDHLRDELLRKNLWNEEDNKVYEQVRSVMINELENHNSKPSLLHGDLWGGNYMFLKDGRPALFDPAPLYGDREFDLGITTVFGGFTQEFYNEYEKHYPLGKGAEKRLEFYRLYLFMVHLVKFGGMYASSVNRSMDHILA . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 10208 11062 . + . GCA_005502385.1_01621_mRNA GCA_005502385.1_01621 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKSYWKNQLPLEDIQDISPVSGGDVNEAFKITTNDDIYFLLVQRNRKPSFYAAEMAGLEAFEKADITAPRVIENGEINGDAYLLLSYLEEGGKGSQKELGQLVAKMHSHQQSEGKFGFELPYEGADVSFDNTWSESWSEIFVERRMDHLRDELLRKNLWNEEDNKVYEQVRSVMINELENHNSKPSLLHGDLWGGNYMFLKDGRPALFDPAPLYGDREFDLGITTVFGGFTQEFYNEYEKHYPLGKGAEKRLEFYRLYLFMVHLVKFGGMYASSVNRSMDHILA . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 10208 11062 . + 0 GCA_005502385.1_01621 GCA_005502385.1_01621_gene,GCA_005502385.1_01621_mRNA GCA_005502385.1_01621 putative ketoamine kinase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKSYWKNQLPLEDIQDISPVSGGDVNEAFKITTNDDIYFLLVQRNRKPSFYAAEMAGLEAFEKADITAPRVIENGEINGDAYLLLSYLEEGGKGSQKELGQLVAKMHSHQQSEGKFGFELPYEGADVSFDNTWSESWSEIFVERRMDHLRDELLRKNLWNEEDNKVYEQVRSVMINELENHNSKPSLLHGDLWGGNYMFLKDGRPALFDPAPLYGDREFDLGITTVFGGFTQEFYNEYEKHYPLGKGAEKRLEFYRLYLFMVHLVKFGGMYASSVNRSMDHILA persistent 284 Fructosamine kinase WP_049419637.1 UPI00066AB011 UniRef100_UPI00066AB011,UniRef50_Q2FV31,UniRef90_A0A3S7GVN5 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 11169 11288 . + . GCA_005502385.1_01622_gene GCA_005502385.1_01622 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MHKVKALGGKVIDEPKTSQGYYGATFADPDGHKYNFLVC . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 11169 11288 . + . GCA_005502385.1_01622_mRNA GCA_005502385.1_01622 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MHKVKALGGKVIDEPKTSQGYYGATFADPDGHKYNFLVC . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 11169 11288 . + 0 GCA_005502385.1_01622 GCA_005502385.1_01622_gene,GCA_005502385.1_01622_mRNA GCA_005502385.1_01622 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MHKVKALGGKVIDEPKTSQGYYGATFADPDGHKYNFLVC shell 39 hypothetical protein . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 11380 12249 . - . GCA_005502385.1_01623_gene GCA_005502385.1_01623 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNKVKKGYLFNIISIAIMSLTPILNKLSLTDLSPIQASFFNALFSTLILLITVLLDKSKIKIYHNKFIWLLGITNTIGILLQYVSLSLLDPVSVGLLGRFYIIFALFLSVLFLNETLCKNDTFPIIFAVIGSFLITHFSGDFNSILGVIVTLSYTFFFALTNMLAKKTVKDIDSKTILLYNQATSTLLLGIILIVTNHLHTIHISIGLFSILLSALCSGVIGLLLFYEGLKYISFREANIIRTLNPIFVFIFSFPFFPLPLTPKFITGAILIIISIIYMNLYKDKKTSS . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 11380 12249 . - . GCA_005502385.1_01623_mRNA GCA_005502385.1_01623 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNKVKKGYLFNIISIAIMSLTPILNKLSLTDLSPIQASFFNALFSTLILLITVLLDKSKIKIYHNKFIWLLGITNTIGILLQYVSLSLLDPVSVGLLGRFYIIFALFLSVLFLNETLCKNDTFPIIFAVIGSFLITHFSGDFNSILGVIVTLSYTFFFALTNMLAKKTVKDIDSKTILLYNQATSTLLLGIILIVTNHLHTIHISIGLFSILLSALCSGVIGLLLFYEGLKYISFREANIIRTLNPIFVFIFSFPFFPLPLTPKFITGAILIIISIIYMNLYKDKKTSS . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 11380 12249 . - 0 GCA_005502385.1_01623 GCA_005502385.1_01623_gene,GCA_005502385.1_01623_mRNA GCA_005502385.1_01623 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNKVKKGYLFNIISIAIMSLTPILNKLSLTDLSPIQASFFNALFSTLILLITVLLDKSKIKIYHNKFIWLLGITNTIGILLQYVSLSLLDPVSVGLLGRFYIIFALFLSVLFLNETLCKNDTFPIIFAVIGSFLITHFSGDFNSILGVIVTLSYTFFFALTNMLAKKTVKDIDSKTILLYNQATSTLLLGIILIVTNHLHTIHISIGLFSILLSALCSGVIGLLLFYEGLKYISFREANIIRTLNPIFVFIFSFPFFPLPLTPKFITGAILIIISIIYMNLYKDKKTSS persistent 289 DMT family transporter WP_137689620.1 UPI0010F6034D UniRef100_UPI0010F6034D,UniRef50_A0A3S7GZC4,UniRef90_A0A3S7GZC4 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 12242 12667 . - . GCA_005502385.1_01624_gene GCA_005502385.1_01624 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIINHIKLQFNETVTKYDSVLIVLTYQGHLVFVKNKKRAWELTGGKVNHNETMNETAIREAYEESGAVINESDIDYLGYYILPNGHTTTITKAEVSYFKDIPKYSETTERILTKEPLDKNLLSFQDGLYEEIFKYLGAYHE . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 12242 12667 . - . GCA_005502385.1_01624_mRNA GCA_005502385.1_01624 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIINHIKLQFNETVTKYDSVLIVLTYQGHLVFVKNKKRAWELTGGKVNHNETMNETAIREAYEESGAVINESDIDYLGYYILPNGHTTTITKAEVSYFKDIPKYSETTERILTKEPLDKNLLSFQDGLYEEIFKYLGAYHE . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 12242 12667 . - 0 GCA_005502385.1_01624 GCA_005502385.1_01624_gene,GCA_005502385.1_01624_mRNA GCA_005502385.1_01624 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIINHIKLQFNETVTKYDSVLIVLTYQGHLVFVKNKKRAWELTGGKVNHNETMNETAIREAYEESGAVINESDIDYLGYYILPNGHTTTITKAEVSYFKDIPKYSETTERILTKEPLDKNLLSFQDGLYEEIFKYLGAYHE persistent 141 ADP-ribose pyrophosphatase WP_002449463.1 UPI00019FC466 UniRef100_A0A8X8KHR7,UniRef50_A0A081NUZ9,UniRef90_A0A1J3ZVF3 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 12636 13337 . - . GCA_005502385.1_01625_gene GCA_005502385.1_01625 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNKVSYNFPPSRIERAKDKLKTFIYNEYYFSPGDKVLEAGCGDGAILFKLIEKYKIERHGIDISENAKSIATEYMIKTGIKFKYVIGDVQNLPYPQNTFDTVSSLGVIEHFLNPDKVMKEMYRVLKTNGHLILMTPNKYSFGILDKKIKILLKVWKFGYQTEYSVNDLEKIANKYGFKVVSRKTFKNDSISFKLISSIDQILNVFNKNFGFYSYIYLIKEVDKNDYKSYQTSI . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 12636 13337 . - . GCA_005502385.1_01625_mRNA GCA_005502385.1_01625 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNKVSYNFPPSRIERAKDKLKTFIYNEYYFSPGDKVLEAGCGDGAILFKLIEKYKIERHGIDISENAKSIATEYMIKTGIKFKYVIGDVQNLPYPQNTFDTVSSLGVIEHFLNPDKVMKEMYRVLKTNGHLILMTPNKYSFGILDKKIKILLKVWKFGYQTEYSVNDLEKIANKYGFKVVSRKTFKNDSISFKLISSIDQILNVFNKNFGFYSYIYLIKEVDKNDYKSYQTSI . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 12636 13337 . - 0 GCA_005502385.1_01625 GCA_005502385.1_01625_gene,GCA_005502385.1_01625_mRNA GCA_005502385.1_01625 Ubiquinone biosynthesis O-methyltransferase%2C mitochondrial GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNKVSYNFPPSRIERAKDKLKTFIYNEYYFSPGDKVLEAGCGDGAILFKLIEKYKIERHGIDISENAKSIATEYMIKTGIKFKYVIGDVQNLPYPQNTFDTVSSLGVIEHFLNPDKVMKEMYRVLKTNGHLILMTPNKYSFGILDKKIKILLKVWKFGYQTEYSVNDLEKIANKYGFKVVSRKTFKNDSISFKLISSIDQILNVFNKNFGFYSYIYLIKEVDKNDYKSYQTSI persistent 233 Methyltransferase domain-containing protein WP_017175096.1 UPI00031F7003 UniRef100_A0A4V2KX73,UniRef50_A0A974QNZ2,UniRef90_A0A974QNZ2 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 13729 13965 . - . GCA_005502385.1_01626_gene GCA_005502385.1_01626 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MRELLDRINQLANKEKVESLSVEEKQEQHQLRQEYLGMIRGQVLHTFSTMKVVDPLGQDVTPDKVYDLREEYGNIQKN . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 13729 13965 . - . GCA_005502385.1_01626_mRNA GCA_005502385.1_01626 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MRELLDRINQLANKEKVESLSVEEKQEQHQLRQEYLGMIRGQVLHTFSTMKVVDPLGQDVTPDKVYDLREEYGNIQKN . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 13729 13965 . - 0 GCA_005502385.1_01626 GCA_005502385.1_01626_gene,GCA_005502385.1_01626_mRNA GCA_005502385.1_01626 hypothetical protein UPF0291 protein YnzC GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MRELLDRINQLANKEKVESLSVEEKQEQHQLRQEYLGMIRGQVLHTFSTMKVVDPLGQDVTPDKVYDLREEYGNIQKN persistent 78 ynzC UPF0291 protein B8W97_03865 COG4224,S WP_002488270.1 UPI00024E19EB UniRef100_A0A4Q9WRB0,UniRef50_A0A380DPS4,UniRef90_A0A2A1KCE5 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 13978 14922 . - . GCA_005502385.1_01627_gene GCA_005502385.1_01627 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSKIENHEGFKRTFKNHKLTLGLSIPFDSKNKEHIDFNEQVKFAQQAERLGFTSLFVRDNPLYSPHLGSVTENYDPFVFLTYLSAFTSKIALGTSSIVATLRHPIHLAKSAVSLDLISNQRLLLGMATGDRAFEFPAFKVDESALTERYQTTIQSLRALWQSHSPNISNSIFELYEDSGLQVLPKHHTIPMFGTGYSRQSMSWLQQHMDGWLFYAQPFQDQKKLVEAWHSGTDRFKPFMNILMIDLSQNPNETVKPIKGGFRTGRKNLLQILKAYESINTNHIILRFTNDDRDIEALIEEVGTYIVPHFPPHTN . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 13978 14922 . - . GCA_005502385.1_01627_mRNA GCA_005502385.1_01627 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSKIENHEGFKRTFKNHKLTLGLSIPFDSKNKEHIDFNEQVKFAQQAERLGFTSLFVRDNPLYSPHLGSVTENYDPFVFLTYLSAFTSKIALGTSSIVATLRHPIHLAKSAVSLDLISNQRLLLGMATGDRAFEFPAFKVDESALTERYQTTIQSLRALWQSHSPNISNSIFELYEDSGLQVLPKHHTIPMFGTGYSRQSMSWLQQHMDGWLFYAQPFQDQKKLVEAWHSGTDRFKPFMNILMIDLSQNPNETVKPIKGGFRTGRKNLLQILKAYESINTNHIILRFTNDDRDIEALIEEVGTYIVPHFPPHTN . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 13978 14922 . - 0 GCA_005502385.1_01627 GCA_005502385.1_01627_gene,GCA_005502385.1_01627_mRNA GCA_005502385.1_01627 F420-dependent glucose-6-phosphate dehydrogenase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSKIENHEGFKRTFKNHKLTLGLSIPFDSKNKEHIDFNEQVKFAQQAERLGFTSLFVRDNPLYSPHLGSVTENYDPFVFLTYLSAFTSKIALGTSSIVATLRHPIHLAKSAVSLDLISNQRLLLGMATGDRAFEFPAFKVDESALTERYQTTIQSLRALWQSHSPNISNSIFELYEDSGLQVLPKHHTIPMFGTGYSRQSMSWLQQHMDGWLFYAQPFQDQKKLVEAWHSGTDRFKPFMNILMIDLSQNPNETVKPIKGGFRTGRKNLLQILKAYESINTNHIILRFTNDDRDIEALIEEVGTYIVPHFPPHTN persistent 314 ssuD LLM class flavin-dependent oxidoreductase COG2141,HR WP_048682736.1 UPI00066139EE UniRef100_UPI00066139EE,UniRef50_B9DIH6,UniRef90_A0A2A1KCX7 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 15080 15646 . - . GCA_005502385.1_01628_gene GCA_005502385.1_01628 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MPSNKMDPRVIRTKQLLVEAFLNVSQEKEMTQITVKNITDRATVNRATFYAHFNDKYEILDYSLSMTVLKDIKETLSISETLNGQIISKLFVSIAYYLENVQNACKLNRETFCNHAHKCINNELEAMFTLMLQHKYPEHDSSIIENSASFLAAGLCGLARHWLDTSELSAEQFIDQNLPFLLHHITNL . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 15080 15646 . - . GCA_005502385.1_01628_mRNA GCA_005502385.1_01628 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MPSNKMDPRVIRTKQLLVEAFLNVSQEKEMTQITVKNITDRATVNRATFYAHFNDKYEILDYSLSMTVLKDIKETLSISETLNGQIISKLFVSIAYYLENVQNACKLNRETFCNHAHKCINNELEAMFTLMLQHKYPEHDSSIIENSASFLAAGLCGLARHWLDTSELSAEQFIDQNLPFLLHHITNL . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 15080 15646 . - 0 GCA_005502385.1_01628 GCA_005502385.1_01628_gene,GCA_005502385.1_01628_mRNA GCA_005502385.1_01628 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MPSNKMDPRVIRTKQLLVEAFLNVSQEKEMTQITVKNITDRATVNRATFYAHFNDKYEILDYSLSMTVLKDIKETLSISETLNGQIISKLFVSIAYYLENVQNACKLNRETFCNHAHKCINNELEAMFTLMLQHKYPEHDSSIIENSASFLAAGLCGLARHWLDTSELSAEQFIDQNLPFLLHHITNL persistent 188 TetR/AcrR family transcriptional regulator WP_019835157.1 UPI000381DAB0 UniRef100_UPI000381DAB0,UniRef50_Q2FV48,UniRef90_A0A6N0I280 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 15936 16994 . + . GCA_005502385.1_01629_gene GCA_005502385.1_01629 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTTELRKISVGDFIFRVLSGVAIGIVVGLVPNAILGEIFKALMHHHPIFATLLHVVQALQFTVPALVGALIAIKFNMTPLAIAVVSSAAYVGSGAAQFKNGAWIIAGIGDLINTMITAAIAVLFILLIEKRVGSMALIVYPTIVGGLSATIGVLILPYVHTINIAIGNMINSFTELQPVLMCMLISMVFSFIIISPLSTVAIAIAIGITGLAAGSASIGISATEAVLLIGTSQVNRVAVPISIFFGGVKMMMPNMVKYPIIMLPILITAAVSGVVGSLIGIAGTKESAGFGFIGMIGPISAFKFLHVDSAVMSIILIIIGFFVVPLVTAFILDVILRRVLKLFTNDIYKFMG . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 15936 16994 . + . GCA_005502385.1_01629_mRNA GCA_005502385.1_01629 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTTELRKISVGDFIFRVLSGVAIGIVVGLVPNAILGEIFKALMHHHPIFATLLHVVQALQFTVPALVGALIAIKFNMTPLAIAVVSSAAYVGSGAAQFKNGAWIIAGIGDLINTMITAAIAVLFILLIEKRVGSMALIVYPTIVGGLSATIGVLILPYVHTINIAIGNMINSFTELQPVLMCMLISMVFSFIIISPLSTVAIAIAIGITGLAAGSASIGISATEAVLLIGTSQVNRVAVPISIFFGGVKMMMPNMVKYPIIMLPILITAAVSGVVGSLIGIAGTKESAGFGFIGMIGPISAFKFLHVDSAVMSIILIIIGFFVVPLVTAFILDVILRRVLKLFTNDIYKFMG . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 15936 16994 . + 0 GCA_005502385.1_01629 GCA_005502385.1_01629_gene,GCA_005502385.1_01629_mRNA GCA_005502385.1_01629 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTTELRKISVGDFIFRVLSGVAIGIVVGLVPNAILGEIFKALMHHHPIFATLLHVVQALQFTVPALVGALIAIKFNMTPLAIAVVSSAAYVGSGAAQFKNGAWIIAGIGDLINTMITAAIAVLFILLIEKRVGSMALIVYPTIVGGLSATIGVLILPYVHTINIAIGNMINSFTELQPVLMCMLISMVFSFIIISPLSTVAIAIAIGITGLAAGSASIGISATEAVLLIGTSQVNRVAVPISIFFGGVKMMMPNMVKYPIIMLPILITAAVSGVVGSLIGIAGTKESAGFGFIGMIGPISAFKFLHVDSAVMSIILIIIGFFVVPLVTAFILDVILRRVLKLFTNDIYKFMG persistent 352 Phosphotransferase system EIIC domain-containing protein WP_019835156.1 UPI000365F609 UniRef100_UPI000365F609,UniRef50_Q2FV51,UniRef90_A0AAE5JNJ9 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 17105 18529 . + . GCA_005502385.1_01630_gene GCA_005502385.1_01630 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAKKIEALALKTAELTRRTHELGIPVMILFEGVPASGKTRLSNELLLNLDAKYTQFIATQSPKQDDLRYQFLQKYWNTLPKKGDINIYFRSWYSHYLDYRENKIKHDKYKNYDVLKQQISSFENMLKRDHYEIIKFFIEINEEKRQEHIQQTKDNPLTRWKVQEYSNVLSTDIYLKDMRQFIKNDKAWEIIDYTEREKAIETMYEHIIKRLETAIEKHEQKEEQRDSKFHSNFKTHLFDRKVDKVKKDEYKQLIEELQNRMREIQFALYDRKIPLILVFEGMDAAGKGGNIKRIREKLDPTGYRVNGISAPTDVELKHHYLWRFAKEMPRTGHIELFDRSWYGRVLVERVEGFATADEWQRAYDEINAFEKMWTDEGAIILKFFLTLDKEEQLKRFKDRQENVNKQWKITDEDWRNREKWDLYVESSHDMVEKTNTSYAPWLVVPADHKKTSRIEILKYIIRNCEKVLWGVKDY . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 17105 18529 . + . GCA_005502385.1_01630_mRNA GCA_005502385.1_01630 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAKKIEALALKTAELTRRTHELGIPVMILFEGVPASGKTRLSNELLLNLDAKYTQFIATQSPKQDDLRYQFLQKYWNTLPKKGDINIYFRSWYSHYLDYRENKIKHDKYKNYDVLKQQISSFENMLKRDHYEIIKFFIEINEEKRQEHIQQTKDNPLTRWKVQEYSNVLSTDIYLKDMRQFIKNDKAWEIIDYTEREKAIETMYEHIIKRLETAIEKHEQKEEQRDSKFHSNFKTHLFDRKVDKVKKDEYKQLIEELQNRMREIQFALYDRKIPLILVFEGMDAAGKGGNIKRIREKLDPTGYRVNGISAPTDVELKHHYLWRFAKEMPRTGHIELFDRSWYGRVLVERVEGFATADEWQRAYDEINAFEKMWTDEGAIILKFFLTLDKEEQLKRFKDRQENVNKQWKITDEDWRNREKWDLYVESSHDMVEKTNTSYAPWLVVPADHKKTSRIEILKYIIRNCEKVLWGVKDY . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 17105 18529 . + 0 GCA_005502385.1_01630 GCA_005502385.1_01630_gene,GCA_005502385.1_01630_mRNA GCA_005502385.1_01630 Polyphosphate:AMP phosphotransferase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAKKIEALALKTAELTRRTHELGIPVMILFEGVPASGKTRLSNELLLNLDAKYTQFIATQSPKQDDLRYQFLQKYWNTLPKKGDINIYFRSWYSHYLDYRENKIKHDKYKNYDVLKQQISSFENMLKRDHYEIIKFFIEINEEKRQEHIQQTKDNPLTRWKVQEYSNVLSTDIYLKDMRQFIKNDKAWEIIDYTEREKAIETMYEHIIKRLETAIEKHEQKEEQRDSKFHSNFKTHLFDRKVDKVKKDEYKQLIEELQNRMREIQFALYDRKIPLILVFEGMDAAGKGGNIKRIREKLDPTGYRVNGISAPTDVELKHHYLWRFAKEMPRTGHIELFDRSWYGRVLVERVEGFATADEWQRAYDEINAFEKMWTDEGAIILKFFLTLDKEEQLKRFKDRQENVNKQWKITDEDWRNREKWDLYVESSHDMVEKTNTSYAPWLVVPADHKKTSRIEILKYIIRNCEKVLWGVKDY persistent 474 Phosphate--AMP phosphotransferase 2.7.4.33 UniRef50_B9E8A2,UniRef90_A0A3S7GZR5 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 18956 19681 . + . GCA_005502385.1_01631_gene GCA_005502385.1_01631 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKTVIASSLAVTLGLTGYALTNDHSAHASEQTTNYSHLADLAQNNPSELNAHPVQAGAYDISFVKDGFKYNFTSNGNTWSWNYTYTGGADTAQSTTDYTESYNQASTQSVSSNNQASTSNVKAVSAPVQRTSSYNNYSARTTSYSAPKTTSYSTASTGGSVKAQFLANGGTEAAWNAIVMPESSGNPNASNGQYHGLGQTNQSWGTGSVASQTQGMANYAKSRYGSWDAAIAFRNANGWW . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 18956 19681 . + . GCA_005502385.1_01631_mRNA GCA_005502385.1_01631 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKTVIASSLAVTLGLTGYALTNDHSAHASEQTTNYSHLADLAQNNPSELNAHPVQAGAYDISFVKDGFKYNFTSNGNTWSWNYTYTGGADTAQSTTDYTESYNQASTQSVSSNNQASTSNVKAVSAPVQRTSSYNNYSARTTSYSAPKTTSYSTASTGGSVKAQFLANGGTEAAWNAIVMPESSGNPNASNGQYHGLGQTNQSWGTGSVASQTQGMANYAKSRYGSWDAAIAFRNANGWW . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 18956 19681 . + 0 GCA_005502385.1_01631 GCA_005502385.1_01631_gene,GCA_005502385.1_01631_mRNA GCA_005502385.1_01631 putative transglycosylase IsaA GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKTVIASSLAVTLGLTGYALTNDHSAHASEQTTNYSHLADLAQNNPSELNAHPVQAGAYDISFVKDGFKYNFTSNGNTWSWNYTYTGGADTAQSTTDYTESYNQASTQSVSSNNQASTSNVKAVSAPVQRTSSYNNYSARTTSYSAPKTTSYSTASTGGSVKAQFLANGGTEAAWNAIVMPESSGNPNASNGQYHGLGQTNQSWGTGSVASQTQGMANYAKSRYGSWDAAIAFRNANGWW persistent 241 Transglycosylase WP_017175091.1 UPI00030B2B8C UniRef100_A0A4Q9WQI4,UniRef50_A7IY64,UniRef90_A0A974L0N2 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 20304 20418 . + . GCA_005502385.1_01632_gene GCA_005502385.1_01632 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 20304 20418 . + . GCA_005502385.1_01632_mRNA GCA_005502385.1_01632 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 . . . . . . . GCA_005502385.1|SCOV01000005.1 Infernal:001001 misc_RNA 20304 20418 81.4 + . GCA_005502385.1_01632 GCA_005502385.1_01632_gene,GCA_005502385.1_01632_mRNA GCA_005502385.1_01632 SAM GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 20487 21656 . + . GCA_005502385.1_01633_gene GCA_005502385.1_01633 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MVISKRLAAIPDSYFGKTMGRKVEHGPLPLINMAVGIPDGETPEGIIEHFSEAIRIPENQKYGAFHGKESFKEAIVNFYQRQYNVTLDKEDEVCILYGTKNGLVALPTCVVNPGENVLLPDPGYTDYLAGVMLADANPVPLNLDSPDYLPNWDNVDKRVLDNTTLVYLTYPNNPTGSTATKEVFDEAIERFKGTNTKIVHDFAYSAFGFDAKNPSILASEHGKDVAIEIFSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAATYALNHYDEFLEEQNETFKRRRDKFEAKLSEAHLPFVHSKGGIYSWLRTPPGYDSETFEQYLLKEKSILVAPGIPFGENGKHYVRISLALDDKWLEEAASRLIDLADMYKAKHS . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 20487 21656 . + . GCA_005502385.1_01633_mRNA GCA_005502385.1_01633 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MVISKRLAAIPDSYFGKTMGRKVEHGPLPLINMAVGIPDGETPEGIIEHFSEAIRIPENQKYGAFHGKESFKEAIVNFYQRQYNVTLDKEDEVCILYGTKNGLVALPTCVVNPGENVLLPDPGYTDYLAGVMLADANPVPLNLDSPDYLPNWDNVDKRVLDNTTLVYLTYPNNPTGSTATKEVFDEAIERFKGTNTKIVHDFAYSAFGFDAKNPSILASEHGKDVAIEIFSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAATYALNHYDEFLEEQNETFKRRRDKFEAKLSEAHLPFVHSKGGIYSWLRTPPGYDSETFEQYLLKEKSILVAPGIPFGENGKHYVRISLALDDKWLEEAASRLIDLADMYKAKHS . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 20487 21656 . + 0 GCA_005502385.1_01633 GCA_005502385.1_01633_gene,GCA_005502385.1_01633_mRNA GCA_005502385.1_01633 Transaminase BacF GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MVISKRLAAIPDSYFGKTMGRKVEHGPLPLINMAVGIPDGETPEGIIEHFSEAIRIPENQKYGAFHGKESFKEAIVNFYQRQYNVTLDKEDEVCILYGTKNGLVALPTCVVNPGENVLLPDPGYTDYLAGVMLADANPVPLNLDSPDYLPNWDNVDKRVLDNTTLVYLTYPNNPTGSTATKEVFDEAIERFKGTNTKIVHDFAYSAFGFDAKNPSILASEHGKDVAIEIFSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAATYALNHYDEFLEEQNETFKRRRDKFEAKLSEAHLPFVHSKGGIYSWLRTPPGYDSETFEQYLLKEKSILVAPGIPFGENGKHYVRISLALDDKWLEEAASRLIDLADMYKAKHS persistent 389 Aminotransferase WP_070492094.1 UPI0008A5F075 UniRef100_UPI0008A5F075,UniRef50_A0A2I7YAX0,UniRef90_A0A3S7GVP4 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 21684 22682 . + . GCA_005502385.1_01634_gene GCA_005502385.1_01634 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTKIKIMSVRDEDIPYINEWAKQNNVDVDLTKEMLTETTVDTVKGFDGLSLSQQHPISEEIFAKLKQYGIKQIAQRSAGFDTYDLDLATKYDIIISNVPSYSPSSIAEFAVTQAINIVRYQKRIQHKVHNYDFRWEPSILSQSIRDLTVAVIGTGRIGSIVAEIFGKGYNSKVVAYDPFPNNALAKFVDYKDTLEEAIKEADIVTVHIPATKYNHHLFNDVVFSNFKKGAVFVNAARGSIVDTQALLSVIDSGRIKGAALDTYEYERGLFPGDYRGKEIDDVLLKQLIKREDIILTPHIAFYTEAAVKNLIVDALDATMDVLTSGTTKLRVN . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 21684 22682 . + . GCA_005502385.1_01634_mRNA GCA_005502385.1_01634 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTKIKIMSVRDEDIPYINEWAKQNNVDVDLTKEMLTETTVDTVKGFDGLSLSQQHPISEEIFAKLKQYGIKQIAQRSAGFDTYDLDLATKYDIIISNVPSYSPSSIAEFAVTQAINIVRYQKRIQHKVHNYDFRWEPSILSQSIRDLTVAVIGTGRIGSIVAEIFGKGYNSKVVAYDPFPNNALAKFVDYKDTLEEAIKEADIVTVHIPATKYNHHLFNDVVFSNFKKGAVFVNAARGSIVDTQALLSVIDSGRIKGAALDTYEYERGLFPGDYRGKEIDDVLLKQLIKREDIILTPHIAFYTEAAVKNLIVDALDATMDVLTSGTTKLRVN . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 21684 22682 . + 0 GCA_005502385.1_01634 GCA_005502385.1_01634_gene,GCA_005502385.1_01634_mRNA GCA_005502385.1_01634 D-lactate dehydrogenase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTKIKIMSVRDEDIPYINEWAKQNNVDVDLTKEMLTETTVDTVKGFDGLSLSQQHPISEEIFAKLKQYGIKQIAQRSAGFDTYDLDLATKYDIIISNVPSYSPSSIAEFAVTQAINIVRYQKRIQHKVHNYDFRWEPSILSQSIRDLTVAVIGTGRIGSIVAEIFGKGYNSKVVAYDPFPNNALAKFVDYKDTLEEAIKEADIVTVHIPATKYNHHLFNDVVFSNFKKGAVFVNAARGSIVDTQALLSVIDSGRIKGAALDTYEYERGLFPGDYRGKEIDDVLLKQLIKREDIILTPHIAFYTEAAVKNLIVDALDATMDVLTSGTTKLRVN persistent 332 D-lactate dehydrogenase WP_017175089.1 UPI0002ED51CF UniRef100_A0A3S7GZD0,UniRef50_A0A658WNB1,UniRef90_A0A3S7GZD0 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 22720 22929 . - . GCA_005502385.1_01635_gene GCA_005502385.1_01635 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MINKVIKVDGMSCEHCKNTIESALAKINGVRTAEVDLDKNEVRVDYNDELVSTKDLHDAIEDQGYDVKE . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 22720 22929 . - . GCA_005502385.1_01635_mRNA GCA_005502385.1_01635 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MINKVIKVDGMSCEHCKNTIESALAKINGVRTAEVDLDKNEVRVDYNDELVSTKDLHDAIEDQGYDVKE . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 22720 22929 . - 0 GCA_005502385.1_01635 GCA_005502385.1_01635_gene,GCA_005502385.1_01635_mRNA GCA_005502385.1_01635 Copper chaperone CopZ GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MINKVIKVDGMSCEHCKNTIESALAKINGVRTAEVDLDKNEVRVDYNDELVSTKDLHDAIEDQGYDVKE persistent 69 copZ copper chaperone CopZ GO:0005507 WP_049419633.1 UPI00066B26CC UniRef100_A0A8I0WB90,UniRef50_A0A533IZR7,UniRef90_A0A3S7GVP1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 23018 25405 . - . GCA_005502385.1_01636_gene GCA_005502385.1_01636 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTQNHQITLNIIGMTCAACSNRIEKRLNKIDGVHAQVNLATEKATIDYPNDQYEVSDFIETIQKLGYDVETDKSELDVIGMTCAACSNRIEKVLNKTTGVKQATVNLTTEQATIDYYPGQTDVDTLIGRIQHLGYDAKPKQSKKEQASRKVQELKRKRNKLIISAILAFPLLLTMLVHLFNIPLPEIFMNPWFQFILATPIQFIIGWQFYVGAYKNLRNGGANMDVLVALGTSAAYFYSIYEMSKWLLDSNTQPHLYFETSAVLITLILFGKYLEARAKSQTTHALNQLLNLQAKEARLIKDDGTETMVPLQTVQVGDTLLVKPGEKIPVDAKVIKGTTTVDESMLTGESMPIDKTVDNEVIGATLNKNGVITVQATKVGQDTALSNIIKVVEEAQSSKAPIQRLADIISGYFVPIVIGIAVLTFIIWIIFVHPGQFEDALVAMISVLVIACPCALGLATPTSIMVGTGRAAEEGILFKGGEYVERTHQIDTVVFDKTGTLTHGTPEVTYFKGDDTLLQYVASAENNSEHPLATAIVKYAKTKQLTLTNIEHYETLPGHGIKATINNKTLFIGNRSLMSNHHIDTASLLDEITQIEQKGQTVMLIAYDQILRGYIAVADTVKSEAKVAVQELKDMDLRTVMITGDNHSTAQAIANEVGIDHVIANVLPEDKAKHVAHFQDKGENVAMVGDGINDAPALVQADIGIAMGTGTEVAIEAADITILGGDIALVPKAIHASHKTIRNIKQNLFWAFGYNAAGIPIAAMGLLAPWIAGAAMALSSVSVVTNALRLKRMKL . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 23018 25405 . - . GCA_005502385.1_01636_mRNA GCA_005502385.1_01636 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTQNHQITLNIIGMTCAACSNRIEKRLNKIDGVHAQVNLATEKATIDYPNDQYEVSDFIETIQKLGYDVETDKSELDVIGMTCAACSNRIEKVLNKTTGVKQATVNLTTEQATIDYYPGQTDVDTLIGRIQHLGYDAKPKQSKKEQASRKVQELKRKRNKLIISAILAFPLLLTMLVHLFNIPLPEIFMNPWFQFILATPIQFIIGWQFYVGAYKNLRNGGANMDVLVALGTSAAYFYSIYEMSKWLLDSNTQPHLYFETSAVLITLILFGKYLEARAKSQTTHALNQLLNLQAKEARLIKDDGTETMVPLQTVQVGDTLLVKPGEKIPVDAKVIKGTTTVDESMLTGESMPIDKTVDNEVIGATLNKNGVITVQATKVGQDTALSNIIKVVEEAQSSKAPIQRLADIISGYFVPIVIGIAVLTFIIWIIFVHPGQFEDALVAMISVLVIACPCALGLATPTSIMVGTGRAAEEGILFKGGEYVERTHQIDTVVFDKTGTLTHGTPEVTYFKGDDTLLQYVASAENNSEHPLATAIVKYAKTKQLTLTNIEHYETLPGHGIKATINNKTLFIGNRSLMSNHHIDTASLLDEITQIEQKGQTVMLIAYDQILRGYIAVADTVKSEAKVAVQELKDMDLRTVMITGDNHSTAQAIANEVGIDHVIANVLPEDKAKHVAHFQDKGENVAMVGDGINDAPALVQADIGIAMGTGTEVAIEAADITILGGDIALVPKAIHASHKTIRNIKQNLFWAFGYNAAGIPIAAMGLLAPWIAGAAMALSSVSVVTNALRLKRMKL . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 23018 25405 . - 0 GCA_005502385.1_01636 GCA_005502385.1_01636_gene,GCA_005502385.1_01636_mRNA GCA_005502385.1_01636 Copper-exporting P-type ATPase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTQNHQITLNIIGMTCAACSNRIEKRLNKIDGVHAQVNLATEKATIDYPNDQYEVSDFIETIQKLGYDVETDKSELDVIGMTCAACSNRIEKVLNKTTGVKQATVNLTTEQATIDYYPGQTDVDTLIGRIQHLGYDAKPKQSKKEQASRKVQELKRKRNKLIISAILAFPLLLTMLVHLFNIPLPEIFMNPWFQFILATPIQFIIGWQFYVGAYKNLRNGGANMDVLVALGTSAAYFYSIYEMSKWLLDSNTQPHLYFETSAVLITLILFGKYLEARAKSQTTHALNQLLNLQAKEARLIKDDGTETMVPLQTVQVGDTLLVKPGEKIPVDAKVIKGTTTVDESMLTGESMPIDKTVDNEVIGATLNKNGVITVQATKVGQDTALSNIIKVVEEAQSSKAPIQRLADIISGYFVPIVIGIAVLTFIIWIIFVHPGQFEDALVAMISVLVIACPCALGLATPTSIMVGTGRAAEEGILFKGGEYVERTHQIDTVVFDKTGTLTHGTPEVTYFKGDDTLLQYVASAENNSEHPLATAIVKYAKTKQLTLTNIEHYETLPGHGIKATINNKTLFIGNRSLMSNHHIDTASLLDEITQIEQKGQTVMLIAYDQILRGYIAVADTVKSEAKVAVQELKDMDLRTVMITGDNHSTAQAIANEVGIDHVIANVLPEDKAKHVAHFQDKGENVAMVGDGINDAPALVQADIGIAMGTGTEVAIEAADITILGGDIALVPKAIHASHKTIRNIKQNLFWAFGYNAAGIPIAAMGLLAPWIAGAAMALSSVSVVTNALRLKRMKL persistent 795 copZ copper chaperone CopZ 7.2.2.8 GO:0005507 WP_049416435.1 UPI00066A84F7 UniRef100_UPI00066A84F7,UniRef50_Q2FV64,UniRef90_A0A3S7GW38 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 25540 25746 . - . GCA_005502385.1_01637_gene GCA_005502385.1_01637 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKGILKGIITILIILGLVKTVQDHDLMNEANQYYNEAKSGELIQSITHPNFNNFKDLDLSHFKPSDFF . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 25540 25746 . - . GCA_005502385.1_01637_mRNA GCA_005502385.1_01637 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKGILKGIITILIILGLVKTVQDHDLMNEANQYYNEAKSGELIQSITHPNFNNFKDLDLSHFKPSDFF . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 25540 25746 . - 0 GCA_005502385.1_01637 GCA_005502385.1_01637_gene,GCA_005502385.1_01637_mRNA GCA_005502385.1_01637 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKGILKGIITILIILGLVKTVQDHDLMNEANQYYNEAKSGELIQSITHPNFNNFKDLDLSHFKPSDFF persistent 68 hypothetical protein WP_017175086.1 UPI000303E52E UniRef100_A0A4Q9WRA1,UniRef50_A0A364UNN2,UniRef90_A0A4Q9WRA1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 25937 26806 . + . GCA_005502385.1_01638_gene GCA_005502385.1_01638 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MDLLDFHKKIKGYTQEKQPGSEKDMDPRPIAEMEEYKAGGKLKGKVALITGGDSGIGRSVAILYAKEGADVAIGYYNEHEDAEDTVNRLKEIGVKAKAYSHDLKDADQSKELIENVVNDFGGLNILVNNGGVQFPNEDFLDIKPEHFNETFKTNIFGMFFLTQAAVPHLSKGDAIVNTTSVTAYRGSGHLIDYSATKGAIVSFTRSIATSLMEKGIRVNGVAPGPIYTPLIPSTFDEDKVENQGGDTPMGRRGQPAELAPAYVFLASYADSSYITGQIIHVNGGDYITS . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 25937 26806 . + . GCA_005502385.1_01638_mRNA GCA_005502385.1_01638 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MDLLDFHKKIKGYTQEKQPGSEKDMDPRPIAEMEEYKAGGKLKGKVALITGGDSGIGRSVAILYAKEGADVAIGYYNEHEDAEDTVNRLKEIGVKAKAYSHDLKDADQSKELIENVVNDFGGLNILVNNGGVQFPNEDFLDIKPEHFNETFKTNIFGMFFLTQAAVPHLSKGDAIVNTTSVTAYRGSGHLIDYSATKGAIVSFTRSIATSLMEKGIRVNGVAPGPIYTPLIPSTFDEDKVENQGGDTPMGRRGQPAELAPAYVFLASYADSSYITGQIIHVNGGDYITS . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 25937 26806 . + 0 GCA_005502385.1_01638 GCA_005502385.1_01638_gene,GCA_005502385.1_01638_mRNA GCA_005502385.1_01638 General stress protein 39 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MDLLDFHKKIKGYTQEKQPGSEKDMDPRPIAEMEEYKAGGKLKGKVALITGGDSGIGRSVAILYAKEGADVAIGYYNEHEDAEDTVNRLKEIGVKAKAYSHDLKDADQSKELIENVVNDFGGLNILVNNGGVQFPNEDFLDIKPEHFNETFKTNIFGMFFLTQAAVPHLSKGDAIVNTTSVTAYRGSGHLIDYSATKGAIVSFTRSIATSLMEKGIRVNGVAPGPIYTPLIPSTFDEDKVENQGGDTPMGRRGQPAELAPAYVFLASYADSSYITGQIIHVNGGDYITS persistent 289 SDR family oxidoreductase WP_019835151.1 UPI00035F061C UniRef100_A0A8I1BDB9,UniRef50_A0A0Q9YPH9,UniRef90_A0A8X8GIX5 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 26902 27495 . + . GCA_005502385.1_01639_gene GCA_005502385.1_01639 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTEKEKMLAHEWYDANFDEELRMDRQRAKDLCFEYNHTRPSDREKRQAILKELLGYEAKQLSISSPFDTDYGWNIKVGENVFINSNSYLMDGGGITIGDNVFIGPSCGLYTAHHPLNYQDRNKGWELAKPIHIGSNIWFGASVTVTPGVSIGDGSVIAAGSVVTNDIPPNSLAAGVPAKVIRTIDQNETINMPNHFE . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 26902 27495 . + . GCA_005502385.1_01639_mRNA GCA_005502385.1_01639 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTEKEKMLAHEWYDANFDEELRMDRQRAKDLCFEYNHTRPSDREKRQAILKELLGYEAKQLSISSPFDTDYGWNIKVGENVFINSNSYLMDGGGITIGDNVFIGPSCGLYTAHHPLNYQDRNKGWELAKPIHIGSNIWFGASVTVTPGVSIGDGSVIAAGSVVTNDIPPNSLAAGVPAKVIRTIDQNETINMPNHFE . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 26902 27495 . + 0 GCA_005502385.1_01639 GCA_005502385.1_01639_gene,GCA_005502385.1_01639_mRNA GCA_005502385.1_01639 Putative acetyltransferase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTEKEKMLAHEWYDANFDEELRMDRQRAKDLCFEYNHTRPSDREKRQAILKELLGYEAKQLSISSPFDTDYGWNIKVGENVFINSNSYLMDGGGITIGDNVFIGPSCGLYTAHHPLNYQDRNKGWELAKPIHIGSNIWFGASVTVTPGVSIGDGSVIAAGSVVTNDIPPNSLAAGVPAKVIRTIDQNETINMPNHFE persistent 197 Sugar O-acetyltransferase WP_049416438.1 UPI00066DCCB7 UniRef100_A0A8I1BDM4,UniRef50_Q4L967,UniRef90_A0A8I1BDM4 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 27722 30229 . + . GCA_005502385.1_01640_gene GCA_005502385.1_01640 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTLKTCLTNQLRRKSNFLFTPIRRKNKSAYTSKVMTYAKYYKKNNVKEYQILYQVRDGKSITDSPYAIFKSLIQQPRYRKYKHIWVVDHNETLLFYKARFKHYKNVEFVIKESREYLKALTESKYLINNSTFPSYFIKKPKQIYINTWHGTPLKYMGLDIENSLYGSQNIIKNFLSSDYLISPNHHTTTIFKRAFRLENIYGGEFLEIGYPRIDLTLNSNRKDMISELNHYLHISKEQSILLYCPTWRGEDVNAPEASLNHIVEEVEKLKHHLDYQVLVKVHPYLYKDALKIKRLKPYLIPDYFDTNEILAIVDLMITDYSSIFFDYLVTNKPIVFYTPDLDEYQSSRGMYIANRDLPGPVAHHIEDVITAIKQKVYDEDSVKKKYQYFKNQYTYLDDGTVTETLINILFEGKRKRPKRKICAKKRVLIYPGGMKNNGITTSIINLLENVDYETYDITLFTNKSKNLEVLNNLNSINKNVRIILRVPPLAASLKETYRIDFVRQRGLKSTLEHLIYPKKVYEREMRKVLGHSQFDYAIDFSGYSMFWANLILATKVKRKLIYLHSDIKADMKRKVNGVKIHYQNLKGVLSLYSQFDQLVCVSDASKDQNKQKMNDKSLNKKFVTSRNTINLNKINQLKLDDSEKFEKQHQSVLVRINNGDISSVPFKEDDFKIVTAGRLSPEKGFDLLIDAFSKVHVSHPHTKLYIMGEGPIRVQLEQQIKRLKLEKHVFLLGQRKNPYYIMKQADVFCLTSHYEGQSMVLLEALTLKVNIIASDIIANRYVLGNGKYGTLVSHDVDDITVALEQCIQKQPSQYEVFNAQEYNQLALKEFYKLLK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 27722 30229 . + . GCA_005502385.1_01640_mRNA GCA_005502385.1_01640 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTLKTCLTNQLRRKSNFLFTPIRRKNKSAYTSKVMTYAKYYKKNNVKEYQILYQVRDGKSITDSPYAIFKSLIQQPRYRKYKHIWVVDHNETLLFYKARFKHYKNVEFVIKESREYLKALTESKYLINNSTFPSYFIKKPKQIYINTWHGTPLKYMGLDIENSLYGSQNIIKNFLSSDYLISPNHHTTTIFKRAFRLENIYGGEFLEIGYPRIDLTLNSNRKDMISELNHYLHISKEQSILLYCPTWRGEDVNAPEASLNHIVEEVEKLKHHLDYQVLVKVHPYLYKDALKIKRLKPYLIPDYFDTNEILAIVDLMITDYSSIFFDYLVTNKPIVFYTPDLDEYQSSRGMYIANRDLPGPVAHHIEDVITAIKQKVYDEDSVKKKYQYFKNQYTYLDDGTVTETLINILFEGKRKRPKRKICAKKRVLIYPGGMKNNGITTSIINLLENVDYETYDITLFTNKSKNLEVLNNLNSINKNVRIILRVPPLAASLKETYRIDFVRQRGLKSTLEHLIYPKKVYEREMRKVLGHSQFDYAIDFSGYSMFWANLILATKVKRKLIYLHSDIKADMKRKVNGVKIHYQNLKGVLSLYSQFDQLVCVSDASKDQNKQKMNDKSLNKKFVTSRNTINLNKINQLKLDDSEKFEKQHQSVLVRINNGDISSVPFKEDDFKIVTAGRLSPEKGFDLLIDAFSKVHVSHPHTKLYIMGEGPIRVQLEQQIKRLKLEKHVFLLGQRKNPYYIMKQADVFCLTSHYEGQSMVLLEALTLKVNIIASDIIANRYVLGNGKYGTLVSHDVDDITVALEQCIQKQPSQYEVFNAQEYNQLALKEFYKLLK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 27722 30229 . + 0 GCA_005502385.1_01640 GCA_005502385.1_01640_gene,GCA_005502385.1_01640_mRNA GCA_005502385.1_01640 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase GtfA subunit GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTLKTCLTNQLRRKSNFLFTPIRRKNKSAYTSKVMTYAKYYKKNNVKEYQILYQVRDGKSITDSPYAIFKSLIQQPRYRKYKHIWVVDHNETLLFYKARFKHYKNVEFVIKESREYLKALTESKYLINNSTFPSYFIKKPKQIYINTWHGTPLKYMGLDIENSLYGSQNIIKNFLSSDYLISPNHHTTTIFKRAFRLENIYGGEFLEIGYPRIDLTLNSNRKDMISELNHYLHISKEQSILLYCPTWRGEDVNAPEASLNHIVEEVEKLKHHLDYQVLVKVHPYLYKDALKIKRLKPYLIPDYFDTNEILAIVDLMITDYSSIFFDYLVTNKPIVFYTPDLDEYQSSRGMYIANRDLPGPVAHHIEDVITAIKQKVYDEDSVKKKYQYFKNQYTYLDDGTVTETLINILFEGKRKRPKRKICAKKRVLIYPGGMKNNGITTSIINLLENVDYETYDITLFTNKSKNLEVLNNLNSINKNVRIILRVPPLAASLKETYRIDFVRQRGLKSTLEHLIYPKKVYEREMRKVLGHSQFDYAIDFSGYSMFWANLILATKVKRKLIYLHSDIKADMKRKVNGVKIHYQNLKGVLSLYSQFDQLVCVSDASKDQNKQKMNDKSLNKKFVTSRNTINLNKINQLKLDDSEKFEKQHQSVLVRINNGDISSVPFKEDDFKIVTAGRLSPEKGFDLLIDAFSKVHVSHPHTKLYIMGEGPIRVQLEQQIKRLKLEKHVFLLGQRKNPYYIMKQADVFCLTSHYEGQSMVLLEALTLKVNIIASDIIANRYVLGNGKYGTLVSHDVDDITVALEQCIQKQPSQYEVFNAQEYNQLALKEFYKLLK persistent 835 CDP-glycerol glycerophosphotransferase family protein WP_049416439.1 UPI00066E8CB0 UniRef100_UPI00066E8CB0,UniRef50_A0A380GR44,UniRef90_A0A3S7GYS9 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 30273 31223 . - . GCA_005502385.1_01641_gene GCA_005502385.1_01641 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKALITGGAGFIGSHVAEYFMKHDTEVHVIDNLSSGFLKNIPFVNNEHIYIKDITDFEFVTQLIQKEQFDFVIHLAAMVSVVETIEKPELSNRINIDATVNILEAIRTYNPNIKKVIFASSAAIYGHLPDLPKSVEQSKPFPLSPYAIQKYAGEQYAKIYNHLYQIPCTCLRFFNIYGPRQNPTSDYSGVISIMNTKFLNHSTFTFYGDGEQTRDFVYIDDLINAISIVLNTTLTDGFIYNVGTGTQTNLKAVFKSFENGFDYHIPYQFEAPRLGDIKHSCADITPLKSLGYKPKYSIEEGITAYLTYNKHNNITI . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 30273 31223 . - . GCA_005502385.1_01641_mRNA GCA_005502385.1_01641 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKALITGGAGFIGSHVAEYFMKHDTEVHVIDNLSSGFLKNIPFVNNEHIYIKDITDFEFVTQLIQKEQFDFVIHLAAMVSVVETIEKPELSNRINIDATVNILEAIRTYNPNIKKVIFASSAAIYGHLPDLPKSVEQSKPFPLSPYAIQKYAGEQYAKIYNHLYQIPCTCLRFFNIYGPRQNPTSDYSGVISIMNTKFLNHSTFTFYGDGEQTRDFVYIDDLINAISIVLNTTLTDGFIYNVGTGTQTNLKAVFKSFENGFDYHIPYQFEAPRLGDIKHSCADITPLKSLGYKPKYSIEEGITAYLTYNKHNNITI . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 30273 31223 . - 0 GCA_005502385.1_01641 GCA_005502385.1_01641_gene,GCA_005502385.1_01641_mRNA GCA_005502385.1_01641 UDP-glucose 4-epimerase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKALITGGAGFIGSHVAEYFMKHDTEVHVIDNLSSGFLKNIPFVNNEHIYIKDITDFEFVTQLIQKEQFDFVIHLAAMVSVVETIEKPELSNRINIDATVNILEAIRTYNPNIKKVIFASSAAIYGHLPDLPKSVEQSKPFPLSPYAIQKYAGEQYAKIYNHLYQIPCTCLRFFNIYGPRQNPTSDYSGVISIMNTKFLNHSTFTFYGDGEQTRDFVYIDDLINAISIVLNTTLTDGFIYNVGTGTQTNLKAVFKSFENGFDYHIPYQFEAPRLGDIKHSCADITPLKSLGYKPKYSIEEGITAYLTYNKHNNITI persistent 316 NAD-dependent dehydratase WP_048681963.1 UPI000660DDB0 UniRef100_UPI000660DDB0,UniRef50_A0A6V7RC91,UniRef90_A0A3S7GZS0 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 31494 33038 . + . GCA_005502385.1_01642_gene GCA_005502385.1_01642 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MVVPFKNEPGIDFSVQENVERFQKTLEKVKHSLGKTLPIVIDGEHIIKDDTFDSINPANTSELVAKVSKATKDDVDNAFESSNKAYDAWRKWSHKDRAELMLRVAAIIRRRKEEIAAVMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMELADGKPVLDREGEHNQYFYKPIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTVLTAYKLIEILEEAGLPKGVVNFVPGDPKDIGDYLVDSVHTHFVTFTGSRATGTRIYERSAVVQEGQTFLKRVIAEMGGKDAIVVDEGVDTDLAAHSIVTSAFGFSGQKCSACSRAIVHSAVYDEVLEKAIELTKDLTIGNTVNNTFMGPVINKKQFDKIKKYIEIGSKEGKIEIGGEVEDSTGYFIHPTIISGLTSSDQVMQEEIFGPVVGFTKFDNFNEAIDIANDTDYGLTGAVITNNREHWIQAVNEFDVGNLYLNRGCTAAVVGYHPFGGFKMSGTDAKTGSPDYLLNFLEQKVVSEMF . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 31494 33038 . + . GCA_005502385.1_01642_mRNA GCA_005502385.1_01642 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MVVPFKNEPGIDFSVQENVERFQKTLEKVKHSLGKTLPIVIDGEHIIKDDTFDSINPANTSELVAKVSKATKDDVDNAFESSNKAYDAWRKWSHKDRAELMLRVAAIIRRRKEEIAAVMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMELADGKPVLDREGEHNQYFYKPIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTVLTAYKLIEILEEAGLPKGVVNFVPGDPKDIGDYLVDSVHTHFVTFTGSRATGTRIYERSAVVQEGQTFLKRVIAEMGGKDAIVVDEGVDTDLAAHSIVTSAFGFSGQKCSACSRAIVHSAVYDEVLEKAIELTKDLTIGNTVNNTFMGPVINKKQFDKIKKYIEIGSKEGKIEIGGEVEDSTGYFIHPTIISGLTSSDQVMQEEIFGPVVGFTKFDNFNEAIDIANDTDYGLTGAVITNNREHWIQAVNEFDVGNLYLNRGCTAAVVGYHPFGGFKMSGTDAKTGSPDYLLNFLEQKVVSEMF . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 31494 33038 . + 0 GCA_005502385.1_01642 GCA_005502385.1_01642_gene,GCA_005502385.1_01642_mRNA GCA_005502385.1_01642 1-pyrroline-5-carboxylate dehydrogenase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MVVPFKNEPGIDFSVQENVERFQKTLEKVKHSLGKTLPIVIDGEHIIKDDTFDSINPANTSELVAKVSKATKDDVDNAFESSNKAYDAWRKWSHKDRAELMLRVAAIIRRRKEEIAAVMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMELADGKPVLDREGEHNQYFYKPIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTVLTAYKLIEILEEAGLPKGVVNFVPGDPKDIGDYLVDSVHTHFVTFTGSRATGTRIYERSAVVQEGQTFLKRVIAEMGGKDAIVVDEGVDTDLAAHSIVTSAFGFSGQKCSACSRAIVHSAVYDEVLEKAIELTKDLTIGNTVNNTFMGPVINKKQFDKIKKYIEIGSKEGKIEIGGEVEDSTGYFIHPTIISGLTSSDQVMQEEIFGPVVGFTKFDNFNEAIDIANDTDYGLTGAVITNNREHWIQAVNEFDVGNLYLNRGCTAAVVGYHPFGGFKMSGTDAKTGSPDYLLNFLEQKVVSEMF persistent 514 1-pyrroline-5-carboxylate dehydrogenase 2 UniRef50_P94391 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 33257 33484 . + . GCA_005502385.1_01643_gene GCA_005502385.1_01643 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MINVSTASKDKKYVVKQIDIQNKNMLYRLGAFGLNVGSKISIKQKCLLNGPSVVEINGQCVSIRQRDARLIMLEE . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 33257 33484 . + . GCA_005502385.1_01643_mRNA GCA_005502385.1_01643 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MINVSTASKDKKYVVKQIDIQNKNMLYRLGAFGLNVGSKISIKQKCLLNGPSVVEINGQCVSIRQRDARLIMLEE . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 33257 33484 . + 0 GCA_005502385.1_01643 GCA_005502385.1_01643_gene,GCA_005502385.1_01643_mRNA GCA_005502385.1_01643 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MINVSTASKDKKYVVKQIDIQNKNMLYRLGAFGLNVGSKISIKQKCLLNGPSVVEINGQCVSIRQRDARLIMLEE persistent 75 feoA FeoA domain-containing protein WP_002449375.1 UPI00019FC3A2 UniRef100_A0A1J6EQK9,UniRef50_A0A1J6EQK9,UniRef90_A0A1J6EQK9 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 33489 35483 . + . GCA_005502385.1_01644_gene GCA_005502385.1_01644 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MHESFCILGNPNVGKTSLFNALTGSYEYIGNWSGVTVEKKVGQLKKDIGNLIDLPGIYDLSPISKDETVVTDYLMTNTFTGMINIIDASQLKRNLQLTIQLMELNEPIIIGLNMVDVATQRGIKIKYEGLMRKLKVPVFPIVARKGKGTEELLNELSFLNPKEKRNFKISYGKETEDAIKQMTSIIQAHTEYPSKRLRFIAIQYLLDNPEIERELPSVISEQIEPIKEKLSQHLDISIRQHIEIIRNQYIDRLLDGVVEYPNEEQQFLTEKLDKIIMNRYLGIPIFLVIMWLIFQTTFTWIGTPLSDQLDAFFSGPLTDWLKAGMHYIHVAPFLQNLITDGIVAGVGSVLVFVPQIIVLFFFISLLEDSGYMARIAVLMDRTMESIGLSGKSFIPMIIGFGCNVPSIMATRSIENEKERLITILIAPFMSCSARLPVYAIFVGVFFEKYQSLVVLSLYVLGIVVALIVSTLLNKFILKSENSVFIVELPTYRVPSVKTLWRSTWEKAKGFVKKAGTFIFGGSVVIWALSYIGPHGVNVQIDESFMHSIGEFFGHLIAPLGFGSWQAGATLIPGFLAKEVIVSSMAILYSSSEGGLVNVIQQQFTPLSAYAFMIFILLYVPCISTVATIRKETTSWKWTLTALIYPIFTAYILTFAFYQITKLFI . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 33489 35483 . + . GCA_005502385.1_01644_mRNA GCA_005502385.1_01644 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MHESFCILGNPNVGKTSLFNALTGSYEYIGNWSGVTVEKKVGQLKKDIGNLIDLPGIYDLSPISKDETVVTDYLMTNTFTGMINIIDASQLKRNLQLTIQLMELNEPIIIGLNMVDVATQRGIKIKYEGLMRKLKVPVFPIVARKGKGTEELLNELSFLNPKEKRNFKISYGKETEDAIKQMTSIIQAHTEYPSKRLRFIAIQYLLDNPEIERELPSVISEQIEPIKEKLSQHLDISIRQHIEIIRNQYIDRLLDGVVEYPNEEQQFLTEKLDKIIMNRYLGIPIFLVIMWLIFQTTFTWIGTPLSDQLDAFFSGPLTDWLKAGMHYIHVAPFLQNLITDGIVAGVGSVLVFVPQIIVLFFFISLLEDSGYMARIAVLMDRTMESIGLSGKSFIPMIIGFGCNVPSIMATRSIENEKERLITILIAPFMSCSARLPVYAIFVGVFFEKYQSLVVLSLYVLGIVVALIVSTLLNKFILKSENSVFIVELPTYRVPSVKTLWRSTWEKAKGFVKKAGTFIFGGSVVIWALSYIGPHGVNVQIDESFMHSIGEFFGHLIAPLGFGSWQAGATLIPGFLAKEVIVSSMAILYSSSEGGLVNVIQQQFTPLSAYAFMIFILLYVPCISTVATIRKETTSWKWTLTALIYPIFTAYILTFAFYQITKLFI . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 33489 35483 . + 0 GCA_005502385.1_01644 GCA_005502385.1_01644_gene,GCA_005502385.1_01644_mRNA GCA_005502385.1_01644 Fe(2+) transporter FeoB GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MHESFCILGNPNVGKTSLFNALTGSYEYIGNWSGVTVEKKVGQLKKDIGNLIDLPGIYDLSPISKDETVVTDYLMTNTFTGMINIIDASQLKRNLQLTIQLMELNEPIIIGLNMVDVATQRGIKIKYEGLMRKLKVPVFPIVARKGKGTEELLNELSFLNPKEKRNFKISYGKETEDAIKQMTSIIQAHTEYPSKRLRFIAIQYLLDNPEIERELPSVISEQIEPIKEKLSQHLDISIRQHIEIIRNQYIDRLLDGVVEYPNEEQQFLTEKLDKIIMNRYLGIPIFLVIMWLIFQTTFTWIGTPLSDQLDAFFSGPLTDWLKAGMHYIHVAPFLQNLITDGIVAGVGSVLVFVPQIIVLFFFISLLEDSGYMARIAVLMDRTMESIGLSGKSFIPMIIGFGCNVPSIMATRSIENEKERLITILIAPFMSCSARLPVYAIFVGVFFEKYQSLVVLSLYVLGIVVALIVSTLLNKFILKSENSVFIVELPTYRVPSVKTLWRSTWEKAKGFVKKAGTFIFGGSVVIWALSYIGPHGVNVQIDESFMHSIGEFFGHLIAPLGFGSWQAGATLIPGFLAKEVIVSSMAILYSSSEGGLVNVIQQQFTPLSAYAFMIFILLYVPCISTVATIRKETTSWKWTLTALIYPIFTAYILTFAFYQITKLFI persistent 664 feoB ferrous iron transport protein B GO:0005525,GO:0006826,GO:0015093,GO:0016020 UniRef50_Q99R86,UniRef90_A0A974L055 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 35495 35689 . + . GCA_005502385.1_01645_gene GCA_005502385.1_01645 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTMTLLINVIIFVAIFGYAAYTLYKFFNRSTQGKCGGCDTDCSCDINASSELNELKLNHIKNNN . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 35495 35689 . + . GCA_005502385.1_01645_mRNA GCA_005502385.1_01645 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTMTLLINVIIFVAIFGYAAYTLYKFFNRSTQGKCGGCDTDCSCDINASSELNELKLNHIKNNN . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 35495 35689 . + 0 GCA_005502385.1_01645 GCA_005502385.1_01645_gene,GCA_005502385.1_01645_mRNA GCA_005502385.1_01645 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTMTLLINVIIFVAIFGYAAYTLYKFFNRSTQGKCGGCDTDCSCDINASSELNELKLNHIKNNN persistent 64 FeoB-associated Cys-rich membrane protein WP_371106358.1 UPI000AD7FE4F UniRef100_A0A4Q9WQE2,UniRef50_Q5HL62,UniRef90_A0A4Q9WQE2 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 35761 36309 . - . GCA_005502385.1_01646_gene GCA_005502385.1_01646 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNDKDLRVIKTKKALTSSLYALLEIEPFSSITVHKICENAGIHRTTFYKHFYDKYELLVYLLEVIGKNYFAIDIKERINRPFQVLSNSLNRETLSRIEYMQEEDNEYNKVRNQFLIDIIKNDFYENMDRIALEETIPKSLVFYVFGSIIDGFLEWQKNEETTLKPKEMDEIFHKLVNIKTIN . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 35761 36309 . - . GCA_005502385.1_01646_mRNA GCA_005502385.1_01646 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNDKDLRVIKTKKALTSSLYALLEIEPFSSITVHKICENAGIHRTTFYKHFYDKYELLVYLLEVIGKNYFAIDIKERINRPFQVLSNSLNRETLSRIEYMQEEDNEYNKVRNQFLIDIIKNDFYENMDRIALEETIPKSLVFYVFGSIIDGFLEWQKNEETTLKPKEMDEIFHKLVNIKTIN . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 35761 36309 . - 0 GCA_005502385.1_01646 GCA_005502385.1_01646_gene,GCA_005502385.1_01646_mRNA GCA_005502385.1_01646 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNDKDLRVIKTKKALTSSLYALLEIEPFSSITVHKICENAGIHRTTFYKHFYDKYELLVYLLEVIGKNYFAIDIKERINRPFQVLSNSLNRETLSRIEYMQEEDNEYNKVRNQFLIDIIKNDFYENMDRIALEETIPKSLVFYVFGSIIDGFLEWQKNEETTLKPKEMDEIFHKLVNIKTIN persistent 182 TetR/AcrR family transcriptional regulator WP_070436345.1 UPI0008A59181 UniRef100_UPI0008A59181,UniRef50_Q2FV69,UniRef90_A0A974KY54 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 36636 37100 . + . GCA_005502385.1_01647_gene GCA_005502385.1_01647 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKGSKRLDQIKEDNKKQLKKLFKYDKNNALSFSKQDREKVQDKFGVYVIFDKKTPIFVGQTGGYSTGYQPITKDLFNKMGQYNLKSGVGTTKFKKGLAQQKGVSEDDIKSITAEDYGLKFQYVNVKDEPAFINILEILALEYAKDKGYELYNFN . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 36636 37100 . + . GCA_005502385.1_01647_mRNA GCA_005502385.1_01647 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKGSKRLDQIKEDNKKQLKKLFKYDKNNALSFSKQDREKVQDKFGVYVIFDKKTPIFVGQTGGYSTGYQPITKDLFNKMGQYNLKSGVGTTKFKKGLAQQKGVSEDDIKSITAEDYGLKFQYVNVKDEPAFINILEILALEYAKDKGYELYNFN . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 36636 37100 . + 0 GCA_005502385.1_01647 GCA_005502385.1_01647_gene,GCA_005502385.1_01647_mRNA GCA_005502385.1_01647 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKGSKRLDQIKEDNKKQLKKLFKYDKNNALSFSKQDREKVQDKFGVYVIFDKKTPIFVGQTGGYSTGYQPITKDLFNKMGQYNLKSGVGTTKFKKGLAQQKGVSEDDIKSITAEDYGLKFQYVNVKDEPAFINILEILALEYAKDKGYELYNFN persistent 154 GIY-YIG domain-containing protein WP_017175077.1 UPI0002E0AC98 UniRef100_A0A4Q9WR92,UniRef50_Q4A0E1,UniRef90_A0A2A1KCC5 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 37252 37773 . + . GCA_005502385.1_01648_gene GCA_005502385.1_01648 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSYSMLYQSPVGNLEIITDGEVVMQLEYLYQYTHLRFPTNHELYIFKKVKRWLDDYFLGNNPEIDFPLQPHGTPFQQEVWAYLNTIPYGELTTYGTIAKHIGQLLNKPKMSAQAVGGAVGKNPISIIIPCHRVVGKDGSLTGYGGTIDNKIKLLEIENVNMSQLYRPLYTTKP . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 37252 37773 . + . GCA_005502385.1_01648_mRNA GCA_005502385.1_01648 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSYSMLYQSPVGNLEIITDGEVVMQLEYLYQYTHLRFPTNHELYIFKKVKRWLDDYFLGNNPEIDFPLQPHGTPFQQEVWAYLNTIPYGELTTYGTIAKHIGQLLNKPKMSAQAVGGAVGKNPISIIIPCHRVVGKDGSLTGYGGTIDNKIKLLEIENVNMSQLYRPLYTTKP . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 37252 37773 . + 0 GCA_005502385.1_01648 GCA_005502385.1_01648_gene,GCA_005502385.1_01648_mRNA GCA_005502385.1_01648 Methylated-DNA--protein-cysteine methyltransferase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSYSMLYQSPVGNLEIITDGEVVMQLEYLYQYTHLRFPTNHELYIFKKVKRWLDDYFLGNNPEIDFPLQPHGTPFQQEVWAYLNTIPYGELTTYGTIAKHIGQLLNKPKMSAQAVGGAVGKNPISIIIPCHRVVGKDGSLTGYGGTIDNKIKLLEIENVNMSQLYRPLYTTKP persistent 173 Methylated-DNA--protein-cysteine methyltransferase WP_019835144.1 UPI0003686BB1 UniRef100_UPI0003686BB1,UniRef50_A0A3A5LJI7,UniRef90_A0A4Q9WU15 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 37894 39066 . - . GCA_005502385.1_01649_gene GCA_005502385.1_01649 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MPVNIGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTQMAVSPVSQDIVSMGANAAKDIITEDDKKHIGMVIVATESAIDNAKAAAVQIHHLLNIQPFARCFEMKEACYAATPAIQLAKDYLANRPNEKVLVIASDTARYGIESGGEPTQGAGAVAMLISHQPRILQLNDDAVAYTADVYDFWRPTGHKYPLVAGALSKDAYIESFQESWKEYARREDKSLSDFESLCFHVPFTKMGKKALDSIINDTDETTQSRLTSGYEDAVYYNRYVGNIYTGSLYLSLISLLENRTLTPGQTIGLFSYGSGSVGEFFSATVVEGFEQHLDKKAHQTLLNERQEVSVKEYESFFRRFDDLSFDHEIENVENDKNIFYLENIEDDIRYYHSPE . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 37894 39066 . - . GCA_005502385.1_01649_mRNA GCA_005502385.1_01649 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MPVNIGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTQMAVSPVSQDIVSMGANAAKDIITEDDKKHIGMVIVATESAIDNAKAAAVQIHHLLNIQPFARCFEMKEACYAATPAIQLAKDYLANRPNEKVLVIASDTARYGIESGGEPTQGAGAVAMLISHQPRILQLNDDAVAYTADVYDFWRPTGHKYPLVAGALSKDAYIESFQESWKEYARREDKSLSDFESLCFHVPFTKMGKKALDSIINDTDETTQSRLTSGYEDAVYYNRYVGNIYTGSLYLSLISLLENRTLTPGQTIGLFSYGSGSVGEFFSATVVEGFEQHLDKKAHQTLLNERQEVSVKEYESFFRRFDDLSFDHEIENVENDKNIFYLENIEDDIRYYHSPE . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 37894 39066 . - 0 GCA_005502385.1_01649 GCA_005502385.1_01649_gene,GCA_005502385.1_01649_mRNA GCA_005502385.1_01649 Hydroxymethylglutaryl-CoA synthase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MPVNIGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTQMAVSPVSQDIVSMGANAAKDIITEDDKKHIGMVIVATESAIDNAKAAAVQIHHLLNIQPFARCFEMKEACYAATPAIQLAKDYLANRPNEKVLVIASDTARYGIESGGEPTQGAGAVAMLISHQPRILQLNDDAVAYTADVYDFWRPTGHKYPLVAGALSKDAYIESFQESWKEYARREDKSLSDFESLCFHVPFTKMGKKALDSIINDTDETTQSRLTSGYEDAVYYNRYVGNIYTGSLYLSLISLLENRTLTPGQTIGLFSYGSGSVGEFFSATVVEGFEQHLDKKAHQTLLNERQEVSVKEYESFFRRFDDLSFDHEIENVENDKNIFYLENIEDDIRYYHSPE persistent 390 hydroxymethylglutaryl-CoA synthase 2.3.3.10 GO:0004421 UniRef50_R3WMN8,UniRef90_A0A657M4I4 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 39173 40327 . + . GCA_005502385.1_01650_gene GCA_005502385.1_01650 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKQIAIVSAKRTPIGRYKGKLRNYSAVELGTTALKGAIESIDIDPALIEQVIFGNVLQSGIGQNSARQIAIKSGIPDTTPAMTINEVCGSGLKAIILGKQLIQLGEAKVVAVGGVESMTNAPKLILKDGEDPVESFMHDGLTDAFHYVPMGVTAENIAEKYHVTREMQDEFANHSHAKAAKAVEEGKFDNEIIKMTDAEGNEMTSDEGIRPNSSVEKLSTLKTIFKENGTVTGGNASSINDGSSALILMEATFAKEHGFEILGIVGDYAEVGCDPQYMGYAPFYAVEKLLEKTHQHINDIDIIEMTEAFAAQSIPVKDHLKIPDNILNIYGGAIALGHPIGASGARLVTTLVNALEQEHQHTGIATACIGGGLGIALMIEKGVH . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 39173 40327 . + . GCA_005502385.1_01650_mRNA GCA_005502385.1_01650 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKQIAIVSAKRTPIGRYKGKLRNYSAVELGTTALKGAIESIDIDPALIEQVIFGNVLQSGIGQNSARQIAIKSGIPDTTPAMTINEVCGSGLKAIILGKQLIQLGEAKVVAVGGVESMTNAPKLILKDGEDPVESFMHDGLTDAFHYVPMGVTAENIAEKYHVTREMQDEFANHSHAKAAKAVEEGKFDNEIIKMTDAEGNEMTSDEGIRPNSSVEKLSTLKTIFKENGTVTGGNASSINDGSSALILMEATFAKEHGFEILGIVGDYAEVGCDPQYMGYAPFYAVEKLLEKTHQHINDIDIIEMTEAFAAQSIPVKDHLKIPDNILNIYGGAIALGHPIGASGARLVTTLVNALEQEHQHTGIATACIGGGLGIALMIEKGVH . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 39173 40327 . + 0 GCA_005502385.1_01650 GCA_005502385.1_01650_gene,GCA_005502385.1_01650_mRNA GCA_005502385.1_01650 Acetyl-CoA acetyltransferase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKQIAIVSAKRTPIGRYKGKLRNYSAVELGTTALKGAIESIDIDPALIEQVIFGNVLQSGIGQNSARQIAIKSGIPDTTPAMTINEVCGSGLKAIILGKQLIQLGEAKVVAVGGVESMTNAPKLILKDGEDPVESFMHDGLTDAFHYVPMGVTAENIAEKYHVTREMQDEFANHSHAKAAKAVEEGKFDNEIIKMTDAEGNEMTSDEGIRPNSSVEKLSTLKTIFKENGTVTGGNASSINDGSSALILMEATFAKEHGFEILGIVGDYAEVGCDPQYMGYAPFYAVEKLLEKTHQHINDIDIIEMTEAFAAQSIPVKDHLKIPDNILNIYGGAIALGHPIGASGARLVTTLVNALEQEHQHTGIATACIGGGLGIALMIEKGVH persistent 384 putative acetyl-CoA acyltransferase WP_019835142.1 UPI00037B66B0 UniRef100_A0A8I0WAS8,UniRef50_A2RJR9,UniRef90_A0A3S7GYT4 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 40329 41606 . + . GCA_005502385.1_01651_gene GCA_005502385.1_01651 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKSLDKNFRHLSREDKLKQLVDYGWLDKTNYQTLLSNPVIDEEVANSLIENVIGQGTLPVGLLPKIIVDEKEYVVPMMVEEPSVVAAASYGSKLVNQTGGFKTIKSERLMIGQIVFDDVKDTEDLTQRIQKQENQIKRIADEAYPSIIHRGGGYRGIDIDAFPNEQLLSLKVFVDTKDAMGANMLNTILEAVTAYLKNELTDQEILMSILSNHATSSVVRVEGEIDINDLNRGDYSGEEVAKRMERASVLAQVDIHRAATHNKGVMNGIHAVVLATGNDTRGAEASAHAYAARDGQYRGIATWKYDEARGRLVGTIEVPMTLAIVGGGTKVLPVAKASLDLLNVESARELGHVVAAVGLAQNFSACRALVSEGIQKGHMSLQYKSLAIVVGAKGEEISKVAEQLKQEPKANTEAAERILKSIRQS . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 40329 41606 . + . GCA_005502385.1_01651_mRNA GCA_005502385.1_01651 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKSLDKNFRHLSREDKLKQLVDYGWLDKTNYQTLLSNPVIDEEVANSLIENVIGQGTLPVGLLPKIIVDEKEYVVPMMVEEPSVVAAASYGSKLVNQTGGFKTIKSERLMIGQIVFDDVKDTEDLTQRIQKQENQIKRIADEAYPSIIHRGGGYRGIDIDAFPNEQLLSLKVFVDTKDAMGANMLNTILEAVTAYLKNELTDQEILMSILSNHATSSVVRVEGEIDINDLNRGDYSGEEVAKRMERASVLAQVDIHRAATHNKGVMNGIHAVVLATGNDTRGAEASAHAYAARDGQYRGIATWKYDEARGRLVGTIEVPMTLAIVGGGTKVLPVAKASLDLLNVESARELGHVVAAVGLAQNFSACRALVSEGIQKGHMSLQYKSLAIVVGAKGEEISKVAEQLKQEPKANTEAAERILKSIRQS . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 40329 41606 . + 0 GCA_005502385.1_01651 GCA_005502385.1_01651_gene,GCA_005502385.1_01651_mRNA GCA_005502385.1_01651 3-hydroxy-3-methylglutaryl-coenzyme A reductase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKSLDKNFRHLSREDKLKQLVDYGWLDKTNYQTLLSNPVIDEEVANSLIENVIGQGTLPVGLLPKIIVDEKEYVVPMMVEEPSVVAAASYGSKLVNQTGGFKTIKSERLMIGQIVFDDVKDTEDLTQRIQKQENQIKRIADEAYPSIIHRGGGYRGIDIDAFPNEQLLSLKVFVDTKDAMGANMLNTILEAVTAYLKNELTDQEILMSILSNHATSSVVRVEGEIDINDLNRGDYSGEEVAKRMERASVLAQVDIHRAATHNKGVMNGIHAVVLATGNDTRGAEASAHAYAARDGQYRGIATWKYDEARGRLVGTIEVPMTLAIVGGGTKVLPVAKASLDLLNVESARELGHVVAAVGLAQNFSACRALVSEGIQKGHMSLQYKSLAIVVGAKGEEISKVAEQLKQEPKANTEAAERILKSIRQS persistent 425 hydroxymethylglutaryl-CoA reductase, degradative 1.1.1.88 GO:0004420,GO:0015936,GO:0016616 WP_019835141.1 UPI0003744F3C UniRef100_A0A8I0WA78,UniRef50_B9DLB2,UniRef90_A0A3S7GZS5 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 41680 42114 . - . GCA_005502385.1_01652_gene GCA_005502385.1_01652 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKIKTFILRLILATAIIFTGTYTYQNVEHTHTSEAAGYNYYNKYQCTWWAYQRRVQLGKPVSNQWGNAKNWYYRAQLAGYRTGHKAKRYAIMQSTAGYYGHVAIVERVYSNGKILVSEYNYNRPLAYSTRYISASAARNYNYIY . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 41680 42114 . - . GCA_005502385.1_01652_mRNA GCA_005502385.1_01652 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKIKTFILRLILATAIIFTGTYTYQNVEHTHTSEAAGYNYYNKYQCTWWAYQRRVQLGKPVSNQWGNAKNWYYRAQLAGYRTGHKAKRYAIMQSTAGYYGHVAIVERVYSNGKILVSEYNYNRPLAYSTRYISASAARNYNYIY . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 41680 42114 . - 0 GCA_005502385.1_01652 GCA_005502385.1_01652_gene,GCA_005502385.1_01652_mRNA GCA_005502385.1_01652 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKIKTFILRLILATAIIFTGTYTYQNVEHTHTSEAAGYNYYNKYQCTWWAYQRRVQLGKPVSNQWGNAKNWYYRAQLAGYRTGHKAKRYAIMQSTAGYYGHVAIVERVYSNGKILVSEYNYNRPLAYSTRYISASAARNYNYIY persistent 144 CHAP domain-containing protein WP_070436347.1 UPI0008A4A666 UniRef100_UPI0008A4A666,UniRef50_Q2FV81,UniRef90_A0A3S7GVI1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 42332 42547 . - . GCA_005502385.1_01653_gene GCA_005502385.1_01653 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSFYEFMQNFIGDDTPLGELVNWINQDNTFPKDVKSQNEILLYFRTNPCLENIPVTSVKRALAVFNQFTDV . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 42332 42547 . - . GCA_005502385.1_01653_mRNA GCA_005502385.1_01653 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSFYEFMQNFIGDDTPLGELVNWINQDNTFPKDVKSQNEILLYFRTNPCLENIPVTSVKRALAVFNQFTDV . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 42332 42547 . - 0 GCA_005502385.1_01653 GCA_005502385.1_01653_gene,GCA_005502385.1_01653_mRNA GCA_005502385.1_01653 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSFYEFMQNFIGDDTPLGELVNWINQDNTFPKDVKSQNEILLYFRTNPCLENIPVTSVKRALAVFNQFTDV persistent 71 Sterile alpha motif-like domain-containing protein WP_002454831.1 UPI0001EF51D4 UniRef100_A0A1L8Y9G6,UniRef50_Q2FV82,UniRef90_A0A1L8Y9G6 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 42787 43656 . + . GCA_005502385.1_01654_gene GCA_005502385.1_01654 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKYFMEVVNQGGMTNASKSLYIAQPTISKAIKDIENELDMPLFDRQKRYLVLTDAGKVFYKKCEEILALYDNIPNEINGLLGLETGHINIGMSAVMDMQQFINILAEFHKLYPNVTYSLNESGGKSIENRLINDQIDIGITTIPIDENTFDYVSLYSEDLRLIVSEEHQLAKRSSVTMADLKNEDFILFNEDFYLNDKIIAAAKNAGFIPNTVSNVSQWNFIEYLVIARLGVSILPEHIAKMLKDEIKSIKIEDSGMSWELGAIWKKDKLLSYATSKWIKFMTERLENK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 42787 43656 . + . GCA_005502385.1_01654_mRNA GCA_005502385.1_01654 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKYFMEVVNQGGMTNASKSLYIAQPTISKAIKDIENELDMPLFDRQKRYLVLTDAGKVFYKKCEEILALYDNIPNEINGLLGLETGHINIGMSAVMDMQQFINILAEFHKLYPNVTYSLNESGGKSIENRLINDQIDIGITTIPIDENTFDYVSLYSEDLRLIVSEEHQLAKRSSVTMADLKNEDFILFNEDFYLNDKIIAAAKNAGFIPNTVSNVSQWNFIEYLVIARLGVSILPEHIAKMLKDEIKSIKIEDSGMSWELGAIWKKDKLLSYATSKWIKFMTERLENK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 42787 43656 . + 0 GCA_005502385.1_01654 GCA_005502385.1_01654_gene,GCA_005502385.1_01654_mRNA GCA_005502385.1_01654 HTH-type transcriptional regulator CynR GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKYFMEVVNQGGMTNASKSLYIAQPTISKAIKDIENELDMPLFDRQKRYLVLTDAGKVFYKKCEEILALYDNIPNEINGLLGLETGHINIGMSAVMDMQQFINILAEFHKLYPNVTYSLNESGGKSIENRLINDQIDIGITTIPIDENTFDYVSLYSEDLRLIVSEEHQLAKRSSVTMADLKNEDFILFNEDFYLNDKIIAAAKNAGFIPNTVSNVSQWNFIEYLVIARLGVSILPEHIAKMLKDEIKSIKIEDSGMSWELGAIWKKDKLLSYATSKWIKFMTERLENK persistent 289 cidR cidABC operon transcriptional activator CidR UniRef50_Q2FV83,UniRef90_A0A4Q9WQD6 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 43859 44248 . + . GCA_005502385.1_01655_gene GCA_005502385.1_01655 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKALNIIEIILQIVLVVAISIIGSLLQKWLHIPLAGSIIGMILFYILLHFKIIRVEWVSKGADFLLTTMVFFFIPSVVGIMDIVSNITTSYIIFFLLIIIGTSCVALVSGFIAETMSKKKPHTKKGNH . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 43859 44248 . + . GCA_005502385.1_01655_mRNA GCA_005502385.1_01655 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKALNIIEIILQIVLVVAISIIGSLLQKWLHIPLAGSIIGMILFYILLHFKIIRVEWVSKGADFLLTTMVFFFIPSVVGIMDIVSNITTSYIIFFLLIIIGTSCVALVSGFIAETMSKKKPHTKKGNH . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 43859 44248 . + 0 GCA_005502385.1_01655 GCA_005502385.1_01655_gene,GCA_005502385.1_01655_mRNA GCA_005502385.1_01655 Holin-like protein CidA GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKALNIIEIILQIVLVVAISIIGSLLQKWLHIPLAGSIIGMILFYILLHFKIIRVEWVSKGADFLLTTMVFFFIPSVVGIMDIVSNITTSYIIFFLLIIIGTSCVALVSGFIAETMSKKKPHTKKGNH persistent 129 CidA/LrgA family protein WP_002449529.1 UPI00019FC397 UniRef100_A0AAE5JLY9,UniRef50_P60647,UniRef90_A0A3S7GVQ7 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 44251 44937 . + . GCA_005502385.1_01656_gene GCA_005502385.1_01656 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MDILKGVLMILLTVVMYKLAQILQRKYNNPLLNPALIGSLGIIIVLLLTRQNYHDYMIGGQWINHLLNATVVCLAYPLYKNKDKIVENIGVIFSSVMAGVILNFVLVFSSLKLLGYSEETIVTILPRSITAAVGIEVSQELGGTDTITVLFIITTGLIGSMMGSMLLKVGQFKTSIARGLTYGNASHAFGTAKALEHDIESGAFSSIGMILTAVISSILIPIMIKLFY . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 44251 44937 . + . GCA_005502385.1_01656_mRNA GCA_005502385.1_01656 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MDILKGVLMILLTVVMYKLAQILQRKYNNPLLNPALIGSLGIIIVLLLTRQNYHDYMIGGQWINHLLNATVVCLAYPLYKNKDKIVENIGVIFSSVMAGVILNFVLVFSSLKLLGYSEETIVTILPRSITAAVGIEVSQELGGTDTITVLFIITTGLIGSMMGSMLLKVGQFKTSIARGLTYGNASHAFGTAKALEHDIESGAFSSIGMILTAVISSILIPIMIKLFY . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 44251 44937 . + 0 GCA_005502385.1_01656 GCA_005502385.1_01656_gene,GCA_005502385.1_01656_mRNA GCA_005502385.1_01656 Holin-like protein CidB GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MDILKGVLMILLTVVMYKLAQILQRKYNNPLLNPALIGSLGIIIVLLLTRQNYHDYMIGGQWINHLLNATVVCLAYPLYKNKDKIVENIGVIFSSVMAGVILNFVLVFSSLKLLGYSEETIVTILPRSITAAVGIEVSQELGGTDTITVLFIITTGLIGSMMGSMLLKVGQFKTSIARGLTYGNASHAFGTAKALEHDIESGAFSSIGMILTAVISSILIPIMIKLFY persistent 228 cidB Holin-like protein CidB WP_002449420.1 UPI00019FC396 UniRef100_A0A1L8Y9G7,UniRef50_P60639,UniRef90_A0A1L8Y9G7 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 44988 46727 . + . GCA_005502385.1_01657_gene GCA_005502385.1_01657 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAKIKANEALVKALQAWDIDHLWGIPGDSVDAVVDNLRTVRDTFKFYHVRHEEVASLSAAAYTKLTGKIGVALSIGGPGIVHLLNGMYDAKMDRVPQLIITGQTNSTLLGTKFFQETNISKMVDDVAVFHHQVQKGDDLFEITNEAIRTAYEKNGVAVIICPNDLLTQKIKDTTNRPVDTSRPVLPTPSYRSIKKAAKLINKSKKPVMLVGVGAKNASTELQDFIEAAKIPVIHTLPAKTVLPDSHPYSVGNLGKIGTKTSYQTIQDADLLIMAGTNFPYANYLPKKNIKAIQIDTNPNVIGERFDINVGIVGDVKLAFHQLTEAIKPVPHRSFLDKTLKRKAVWDKWMEKDMNNTSAPIRPERLMKAINDYSKDDAVYSIDVGTSTVWGTRYLDLNVNNKFIISAWLGTMGCGLPGALASNIAYPGRQAIAITGDGAFQMVMQDFATAVQYDLPMTVFVLNNKQLSFIKYEQQAAGELEYAIDFSDMDHAKFAEAAGGKGYVLKDPNRIDEIVEAALNENVPTVVDVHVDPNAAPLPGQIVNEEAYGYGKWAYRSITEDKEFDFDKVPPISVAAKRFL . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 44988 46727 . + . GCA_005502385.1_01657_mRNA GCA_005502385.1_01657 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAKIKANEALVKALQAWDIDHLWGIPGDSVDAVVDNLRTVRDTFKFYHVRHEEVASLSAAAYTKLTGKIGVALSIGGPGIVHLLNGMYDAKMDRVPQLIITGQTNSTLLGTKFFQETNISKMVDDVAVFHHQVQKGDDLFEITNEAIRTAYEKNGVAVIICPNDLLTQKIKDTTNRPVDTSRPVLPTPSYRSIKKAAKLINKSKKPVMLVGVGAKNASTELQDFIEAAKIPVIHTLPAKTVLPDSHPYSVGNLGKIGTKTSYQTIQDADLLIMAGTNFPYANYLPKKNIKAIQIDTNPNVIGERFDINVGIVGDVKLAFHQLTEAIKPVPHRSFLDKTLKRKAVWDKWMEKDMNNTSAPIRPERLMKAINDYSKDDAVYSIDVGTSTVWGTRYLDLNVNNKFIISAWLGTMGCGLPGALASNIAYPGRQAIAITGDGAFQMVMQDFATAVQYDLPMTVFVLNNKQLSFIKYEQQAAGELEYAIDFSDMDHAKFAEAAGGKGYVLKDPNRIDEIVEAALNENVPTVVDVHVDPNAAPLPGQIVNEEAYGYGKWAYRSITEDKEFDFDKVPPISVAAKRFL . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 44988 46727 . + 0 GCA_005502385.1_01657 GCA_005502385.1_01657_gene,GCA_005502385.1_01657_mRNA GCA_005502385.1_01657 Putative thiamine pyrophosphate-containing protein YdaP GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAKIKANEALVKALQAWDIDHLWGIPGDSVDAVVDNLRTVRDTFKFYHVRHEEVASLSAAAYTKLTGKIGVALSIGGPGIVHLLNGMYDAKMDRVPQLIITGQTNSTLLGTKFFQETNISKMVDDVAVFHHQVQKGDDLFEITNEAIRTAYEKNGVAVIICPNDLLTQKIKDTTNRPVDTSRPVLPTPSYRSIKKAAKLINKSKKPVMLVGVGAKNASTELQDFIEAAKIPVIHTLPAKTVLPDSHPYSVGNLGKIGTKTSYQTIQDADLLIMAGTNFPYANYLPKKNIKAIQIDTNPNVIGERFDINVGIVGDVKLAFHQLTEAIKPVPHRSFLDKTLKRKAVWDKWMEKDMNNTSAPIRPERLMKAINDYSKDDAVYSIDVGTSTVWGTRYLDLNVNNKFIISAWLGTMGCGLPGALASNIAYPGRQAIAITGDGAFQMVMQDFATAVQYDLPMTVFVLNNKQLSFIKYEQQAAGELEYAIDFSDMDHAKFAEAAGGKGYVLKDPNRIDEIVEAALNENVPTVVDVHVDPNAAPLPGQIVNEEAYGYGKWAYRSITEDKEFDFDKVPPISVAAKRFL persistent 579 pyruvate oxidase 1.2.3.3 GO:0000287,GO:0030976 WP_002449340.1 UPI00019FC395 UniRef100_A0AAE5JMZ9,UniRef50_A0A0D0QSZ0,UniRef90_A0A3S7GW12 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 46998 49025 . + . GCA_005502385.1_01658_gene GCA_005502385.1_01658 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MFKKLFGQLQRIGKALMLPVAILPAAGLLLAIGTAFQGEALQHYLPFIKNGVIQNIANMMTGAGGIIFDNLPIIFALGVAIGLAGGDGVAAIAAFVGFIIMNKTMGAFLNVTPAQLEDPSKGFANVLGIPTLQTGVFGGIIIGALAAWCYNKFYNISLPSYLGFFAGKRFVPIMMATTSFILAFPMAWIWPFIQNGLNAFSTGLLESNTGLAVFLFGFIKRLLIPFGLHHIFHAPFWFEFGSWKNAAGEIIRGDQRIFIEQIREGAHLTSGKFMQGEFPVMMFGLPAAALAIYQTAKPENKKVVGGLMLSAALTSFLTGITEPLEFSFLFVAPLLFFIHAVLDGLSFLTLYLLHLHLGYTFSGGFIDFVLLGILPNKTPWWLVIPVGLVYAVIYYVVFRFLIVKFNFKTPGREDKQASVANTSASKLPFDVLDAMGGKENIKHLDACITRLRVEVNDKSKVDVEGLKALGASGVLEVGNNMQAIFGPKSDQIKHDMARIMNGDITKPSETTVTEDTSDEPVQLEEVKETDIYAPGTGHIIPLSEVPDKVFSEKMMGDGIGFVPEKGEIVAPFDGTVKTIFPTKHAIGLESDTGIEVLIHIGIDTVKLNGEGFESLVDVNEPVTQGQPLMKINLAYLKEHAPSVVTPVIITNQGDKTLTFDDVDSVDPGKRIMTIK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 46998 49025 . + . GCA_005502385.1_01658_mRNA GCA_005502385.1_01658 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MFKKLFGQLQRIGKALMLPVAILPAAGLLLAIGTAFQGEALQHYLPFIKNGVIQNIANMMTGAGGIIFDNLPIIFALGVAIGLAGGDGVAAIAAFVGFIIMNKTMGAFLNVTPAQLEDPSKGFANVLGIPTLQTGVFGGIIIGALAAWCYNKFYNISLPSYLGFFAGKRFVPIMMATTSFILAFPMAWIWPFIQNGLNAFSTGLLESNTGLAVFLFGFIKRLLIPFGLHHIFHAPFWFEFGSWKNAAGEIIRGDQRIFIEQIREGAHLTSGKFMQGEFPVMMFGLPAAALAIYQTAKPENKKVVGGLMLSAALTSFLTGITEPLEFSFLFVAPLLFFIHAVLDGLSFLTLYLLHLHLGYTFSGGFIDFVLLGILPNKTPWWLVIPVGLVYAVIYYVVFRFLIVKFNFKTPGREDKQASVANTSASKLPFDVLDAMGGKENIKHLDACITRLRVEVNDKSKVDVEGLKALGASGVLEVGNNMQAIFGPKSDQIKHDMARIMNGDITKPSETTVTEDTSDEPVQLEEVKETDIYAPGTGHIIPLSEVPDKVFSEKMMGDGIGFVPEKGEIVAPFDGTVKTIFPTKHAIGLESDTGIEVLIHIGIDTVKLNGEGFESLVDVNEPVTQGQPLMKINLAYLKEHAPSVVTPVIITNQGDKTLTFDDVDSVDPGKRIMTIK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 46998 49025 . + 0 GCA_005502385.1_01658 GCA_005502385.1_01658_gene,GCA_005502385.1_01658_mRNA GCA_005502385.1_01658 PTS system glucose-specific EIICBA component GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MFKKLFGQLQRIGKALMLPVAILPAAGLLLAIGTAFQGEALQHYLPFIKNGVIQNIANMMTGAGGIIFDNLPIIFALGVAIGLAGGDGVAAIAAFVGFIIMNKTMGAFLNVTPAQLEDPSKGFANVLGIPTLQTGVFGGIIIGALAAWCYNKFYNISLPSYLGFFAGKRFVPIMMATTSFILAFPMAWIWPFIQNGLNAFSTGLLESNTGLAVFLFGFIKRLLIPFGLHHIFHAPFWFEFGSWKNAAGEIIRGDQRIFIEQIREGAHLTSGKFMQGEFPVMMFGLPAAALAIYQTAKPENKKVVGGLMLSAALTSFLTGITEPLEFSFLFVAPLLFFIHAVLDGLSFLTLYLLHLHLGYTFSGGFIDFVLLGILPNKTPWWLVIPVGLVYAVIYYVVFRFLIVKFNFKTPGREDKQASVANTSASKLPFDVLDAMGGKENIKHLDACITRLRVEVNDKSKVDVEGLKALGASGVLEVGNNMQAIFGPKSDQIKHDMARIMNGDITKPSETTVTEDTSDEPVQLEEVKETDIYAPGTGHIIPLSEVPDKVFSEKMMGDGIGFVPEKGEIVAPFDGTVKTIFPTKHAIGLESDTGIEVLIHIGIDTVKLNGEGFESLVDVNEPVTQGQPLMKINLAYLKEHAPSVVTPVIITNQGDKTLTFDDVDSVDPGKRIMTIK persistent 675 ptsG PTS system glucose-specific EIICBA component 2.7.1.199 GO:0005886,GO:0008982,GO:0009401,GO:0016301,GO:0055056,GO:0090563,GO:1904659 COG2190,G WP_070436348.1 UPI0008A4FA32 UniRef100_UPI0008A4FA32,UniRef50_P20166,UniRef90_Q4L945 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 49200 50252 . - . GCA_005502385.1_01659_gene GCA_005502385.1_01659 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKAYIYEKPGVAKLVDKEKPVITESTDAIIRMVKTTICGTDLHIIKGDTPEVPQYTTLGHEGIGIVESVGSNVNNFKVGDKVIVSCISSCGKCYYCKKGIYAHCENGGGWILGHLIDGTQAEYVKVPFADNSLYHAPTSLSDEALVMLSDILPTGYEIGVLKGKVKPGSTVAIVGAGPVGLASLLTAQFYSPSKIIMIDLDDHRLATAKKFGATHTINSSNVNETIQQIKDINHRGVDVAIEAVGIPATFDLCQKLIGVDGTIANVGVHGLPVQFDIEKLWIKNINITTGLVSANTTEELLEALKSKIIQPEQLVTHYSKLSEIENAYDLFRNATDHKAIKLLIENDITE . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 49200 50252 . - . GCA_005502385.1_01659_mRNA GCA_005502385.1_01659 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKAYIYEKPGVAKLVDKEKPVITESTDAIIRMVKTTICGTDLHIIKGDTPEVPQYTTLGHEGIGIVESVGSNVNNFKVGDKVIVSCISSCGKCYYCKKGIYAHCENGGGWILGHLIDGTQAEYVKVPFADNSLYHAPTSLSDEALVMLSDILPTGYEIGVLKGKVKPGSTVAIVGAGPVGLASLLTAQFYSPSKIIMIDLDDHRLATAKKFGATHTINSSNVNETIQQIKDINHRGVDVAIEAVGIPATFDLCQKLIGVDGTIANVGVHGLPVQFDIEKLWIKNINITTGLVSANTTEELLEALKSKIIQPEQLVTHYSKLSEIENAYDLFRNATDHKAIKLLIENDITE . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 49200 50252 . - 0 GCA_005502385.1_01659 GCA_005502385.1_01659_gene,GCA_005502385.1_01659_mRNA GCA_005502385.1_01659 Alcohol dehydrogenase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKAYIYEKPGVAKLVDKEKPVITESTDAIIRMVKTTICGTDLHIIKGDTPEVPQYTTLGHEGIGIVESVGSNVNNFKVGDKVIVSCISSCGKCYYCKKGIYAHCENGGGWILGHLIDGTQAEYVKVPFADNSLYHAPTSLSDEALVMLSDILPTGYEIGVLKGKVKPGSTVAIVGAGPVGLASLLTAQFYSPSKIIMIDLDDHRLATAKKFGATHTINSSNVNETIQQIKDINHRGVDVAIEAVGIPATFDLCQKLIGVDGTIANVGVHGLPVQFDIEKLWIKNINITTGLVSANTTEELLEALKSKIIQPEQLVTHYSKLSEIENAYDLFRNATDHKAIKLLIENDITE persistent 350 tdh Alcohol dehydrogenase COG1063,ER WP_137689623.1 UPI0010F6ED3C UniRef100_UPI0010F6ED3C,UniRef50_A0A1J5RVJ2,UniRef90_A0A4U9T2R1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 50459 50785 . + . GCA_005502385.1_01660_gene GCA_005502385.1_01660 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTKNIESIEQFHQFIQTHRLVVIHVMRNHCSVCHAVLPQIEDIVNDYSKVHFAVINQSNVEAIAGELSIFTVPVDLIFLDGKEMHRQARFIDMQDFEHQLSLMHESLK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 50459 50785 . + . GCA_005502385.1_01660_mRNA GCA_005502385.1_01660 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTKNIESIEQFHQFIQTHRLVVIHVMRNHCSVCHAVLPQIEDIVNDYSKVHFAVINQSNVEAIAGELSIFTVPVDLIFLDGKEMHRQARFIDMQDFEHQLSLMHESLK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 50459 50785 . + 0 GCA_005502385.1_01660 GCA_005502385.1_01660_gene,GCA_005502385.1_01660_mRNA GCA_005502385.1_01660 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTKNIESIEQFHQFIQTHRLVVIHVMRNHCSVCHAVLPQIEDIVNDYSKVHFAVINQSNVEAIAGELSIFTVPVDLIFLDGKEMHRQARFIDMQDFEHQLSLMHESLK persistent 108 Thioredoxin family protein WP_017175066.1 UPI0003041817 UniRef100_A0A4Q9WRP5,UniRef50_Q2FV89,UniRef90_A0A4Q9WRP5 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 50840 51802 . - . GCA_005502385.1_01661_gene GCA_005502385.1_01661 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKRNKIVLIGSGFVGSAFAHAVVAKGLVDELAIIDIDEDKAKADVWDLNHATPFGDKFVDVHLGSYSDCSDADIVVICASAKLDKGDTRLKLLEDNVNIFVPMIQKVIAHGFDGYFVLPSNPVDIMSYVIKRVSQFPKNKIIGSGTSLDTARFEFFLSRTFDVAPQNVYAPVIGEHGDSQVAVWSHAQIAGEPVLDLLNKGVDQTTFKQSIASQTTQVGYDIYVRKGTTNFGISLSLVRIVEAILFNKNVIMNVSSYLEGEYGLNDLYIGTPTVINGNGADRVIELKLEEDELTRFKQSSHIILEHQQRADALIESILNK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 50840 51802 . - . GCA_005502385.1_01661_mRNA GCA_005502385.1_01661 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKRNKIVLIGSGFVGSAFAHAVVAKGLVDELAIIDIDEDKAKADVWDLNHATPFGDKFVDVHLGSYSDCSDADIVVICASAKLDKGDTRLKLLEDNVNIFVPMIQKVIAHGFDGYFVLPSNPVDIMSYVIKRVSQFPKNKIIGSGTSLDTARFEFFLSRTFDVAPQNVYAPVIGEHGDSQVAVWSHAQIAGEPVLDLLNKGVDQTTFKQSIASQTTQVGYDIYVRKGTTNFGISLSLVRIVEAILFNKNVIMNVSSYLEGEYGLNDLYIGTPTVINGNGADRVIELKLEEDELTRFKQSSHIILEHQQRADALIESILNK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 50840 51802 . - 0 GCA_005502385.1_01661 GCA_005502385.1_01661_gene,GCA_005502385.1_01661_mRNA GCA_005502385.1_01661 L-lactate dehydrogenase 1 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKRNKIVLIGSGFVGSAFAHAVVAKGLVDELAIIDIDEDKAKADVWDLNHATPFGDKFVDVHLGSYSDCSDADIVVICASAKLDKGDTRLKLLEDNVNIFVPMIQKVIAHGFDGYFVLPSNPVDIMSYVIKRVSQFPKNKIIGSGTSLDTARFEFFLSRTFDVAPQNVYAPVIGEHGDSQVAVWSHAQIAGEPVLDLLNKGVDQTTFKQSIASQTTQVGYDIYVRKGTTNFGISLSLVRIVEAILFNKNVIMNVSSYLEGEYGLNDLYIGTPTVINGNGADRVIELKLEEDELTRFKQSSHIILEHQQRADALIESILNK persistent 320 L-lactate dehydrogenase 1.1.1.27 GO:0004459,GO:0005737,GO:0006096 WP_017175065.1 UPI0002E27137 UniRef100_A0A4Q9WRE7,UniRef50_Q4L941,UniRef90_A0A657M6D3 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 51964 52941 . + . GCA_005502385.1_01662_gene GCA_005502385.1_01662 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKRLLTVATSAILGTLAYIKVKEKRSYQSFITEKYIRMSGMKKTFENTNDAKKALEEVKPLTAGKYDGTDYEFKHRAHTRSINGSVTYIVNDKREPHQDVVLYIHGGAWFQDPLDNHFDFIDQLAGELDARVIMPVYPKVPHRDYRTTFELLKNIYQKEILEVENPQHMTIMGDSAGGQIVLSFAQYLKKETQLPQPGHIVMLSPVLDATFSNPEAKKYEKVDPMLGIEGSKYFIQLWSGDTPIEDYKISPINGDLEGLGRISIFIGTKETLYPDALKLSKMLNDKGIEHDFTPGYNLFHIYPIFPLPERQKFFTQLKNIMGKD . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 51964 52941 . + . GCA_005502385.1_01662_mRNA GCA_005502385.1_01662 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKRLLTVATSAILGTLAYIKVKEKRSYQSFITEKYIRMSGMKKTFENTNDAKKALEEVKPLTAGKYDGTDYEFKHRAHTRSINGSVTYIVNDKREPHQDVVLYIHGGAWFQDPLDNHFDFIDQLAGELDARVIMPVYPKVPHRDYRTTFELLKNIYQKEILEVENPQHMTIMGDSAGGQIVLSFAQYLKKETQLPQPGHIVMLSPVLDATFSNPEAKKYEKVDPMLGIEGSKYFIQLWSGDTPIEDYKISPINGDLEGLGRISIFIGTKETLYPDALKLSKMLNDKGIEHDFTPGYNLFHIYPIFPLPERQKFFTQLKNIMGKD . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 51964 52941 . + 0 GCA_005502385.1_01662 GCA_005502385.1_01662_gene,GCA_005502385.1_01662_mRNA GCA_005502385.1_01662 hypothetical protein """""" GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKRLLTVATSAILGTLAYIKVKEKRSYQSFITEKYIRMSGMKKTFENTNDAKKALEEVKPLTAGKYDGTDYEFKHRAHTRSINGSVTYIVNDKREPHQDVVLYIHGGAWFQDPLDNHFDFIDQLAGELDARVIMPVYPKVPHRDYRTTFELLKNIYQKEILEVENPQHMTIMGDSAGGQIVLSFAQYLKKETQLPQPGHIVMLSPVLDATFSNPEAKKYEKVDPMLGIEGSKYFIQLWSGDTPIEDYKISPINGDLEGLGRISIFIGTKETLYPDALKLSKMLNDKGIEHDFTPGYNLFHIYPIFPLPERQKFFTQLKNIMGKD persistent 325 Alpha/beta hydrolase WP_049416454.1 UPI00066E83CB UniRef100_UPI00066E83CB,UniRef50_A0A3A3AIJ1,UniRef90_A0A3S7GVJ2 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 53160 53258 . - . GCA_005502385.1_01663_gene GCA_005502385.1_01663 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIGATLCGLDGTVSDLLFNQRHIHADWYVTYC . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 53160 53258 . - . GCA_005502385.1_01663_mRNA GCA_005502385.1_01663 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIGATLCGLDGTVSDLLFNQRHIHADWYVTYC . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 53160 53258 . - 0 GCA_005502385.1_01663 GCA_005502385.1_01663_gene,GCA_005502385.1_01663_mRNA GCA_005502385.1_01663 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIGATLCGLDGTVSDLLFNQRHIHADWYVTYC cloud 32 hypothetical protein . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 53382 53699 . - . GCA_005502385.1_01664_gene GCA_005502385.1_01664 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MDKSMAKPVKIAVGIYLSLVLLACSSYLIFILIGSLQGNDMSNSVLDTDHRYINNSSQSSHETINKNKSPHSTSNFTEIEKEDALSSHNDTINTEYKETDTNSRE . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 53382 53699 . - . GCA_005502385.1_01664_mRNA GCA_005502385.1_01664 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MDKSMAKPVKIAVGIYLSLVLLACSSYLIFILIGSLQGNDMSNSVLDTDHRYINNSSQSSHETINKNKSPHSTSNFTEIEKEDALSSHNDTINTEYKETDTNSRE . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 53382 53699 . - 0 GCA_005502385.1_01664 GCA_005502385.1_01664_gene,GCA_005502385.1_01664_mRNA GCA_005502385.1_01664 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MDKSMAKPVKIAVGIYLSLVLLACSSYLIFILIGSLQGNDMSNSVLDTDHRYINNSSQSSHETINKNKSPHSTSNFTEIEKEDALSSHNDTINTEYKETDTNSRE persistent 105 Lipoprotein UniRef50_A0AAE5MZ93,UniRef90_A0AAE5MZ93 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 54038 55195 . + . GCA_005502385.1_01665_gene GCA_005502385.1_01665 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MILIIICIALILFLGIREKKRHTHRLNKIPLRININGIRGKSTITRMIYSILREDQYHVIGKTTGTDARMLYWFTEKEYPVLRKPQGANIGEQRDIVQKVVKQKGNALVNECMAVNPDYQIVFQEDLVKANIGVIVNVMEDHMDVLGPTLQDIAQAFTATIPRNGKLVVMKDEFTDFFAKEAKKRKTELIVVDKNDIPESYLRKFNYLVFPDNVAIALGVAQAVGVEKDVALRGMLNAPPDPGAVEIKYFNANNTKNVFVNAFAANEPQSTKAILNKVESYDYPYTKKVVILNCRSDRVDRTRQFVENFIEDVEFDTLICTGKSTQMVTDLMQHLPEKTYINLENHDFSDIEKAILSESHQALIFCVGNIHGPGGKIAKFIEGIE . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 54038 55195 . + . GCA_005502385.1_01665_mRNA GCA_005502385.1_01665 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MILIIICIALILFLGIREKKRHTHRLNKIPLRININGIRGKSTITRMIYSILREDQYHVIGKTTGTDARMLYWFTEKEYPVLRKPQGANIGEQRDIVQKVVKQKGNALVNECMAVNPDYQIVFQEDLVKANIGVIVNVMEDHMDVLGPTLQDIAQAFTATIPRNGKLVVMKDEFTDFFAKEAKKRKTELIVVDKNDIPESYLRKFNYLVFPDNVAIALGVAQAVGVEKDVALRGMLNAPPDPGAVEIKYFNANNTKNVFVNAFAANEPQSTKAILNKVESYDYPYTKKVVILNCRSDRVDRTRQFVENFIEDVEFDTLICTGKSTQMVTDLMQHLPEKTYINLENHDFSDIEKAILSESHQALIFCVGNIHGPGGKIAKFIEGIE . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 54038 55195 . + 0 GCA_005502385.1_01665 GCA_005502385.1_01665_gene,GCA_005502385.1_01665_mRNA GCA_005502385.1_01665 Capsule biosynthesis protein CapB GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MILIIICIALILFLGIREKKRHTHRLNKIPLRININGIRGKSTITRMIYSILREDQYHVIGKTTGTDARMLYWFTEKEYPVLRKPQGANIGEQRDIVQKVVKQKGNALVNECMAVNPDYQIVFQEDLVKANIGVIVNVMEDHMDVLGPTLQDIAQAFTATIPRNGKLVVMKDEFTDFFAKEAKKRKTELIVVDKNDIPESYLRKFNYLVFPDNVAIALGVAQAVGVEKDVALRGMLNAPPDPGAVEIKYFNANNTKNVFVNAFAANEPQSTKAILNKVESYDYPYTKKVVILNCRSDRVDRTRQFVENFIEDVEFDTLICTGKSTQMVTDLMQHLPEKTYINLENHDFSDIEKAILSESHQALIFCVGNIHGPGGKIAKFIEGIE persistent 385 pgsB poly-gamma-glutamate synthase PgsB 6.3.2.- GO:0016020,GO:0070501 WP_049414298.1 UPI00066D2E69 UniRef100_UPI00066D2E69,UniRef50_A0A654C625,UniRef90_A0A4Q9WQC8 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 55197 55649 . + . GCA_005502385.1_01666_gene GCA_005502385.1_01666 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIGSELYFSLFVGIVLSLIFAEKFGINPAGLVVPGYLALIFDQPIMLLSVLVISCLTYFIVTFGISRWVILYGRRKFAAMILTGMVLKFVFDLIYPLTPFEVVEVSGIGVVIPGIIANTIQKQGVVITLATTMLLTCITYVILFLYSFIN . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 55197 55649 . + . GCA_005502385.1_01666_mRNA GCA_005502385.1_01666 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIGSELYFSLFVGIVLSLIFAEKFGINPAGLVVPGYLALIFDQPIMLLSVLVISCLTYFIVTFGISRWVILYGRRKFAAMILTGMVLKFVFDLIYPLTPFEVVEVSGIGVVIPGIIANTIQKQGVVITLATTMLLTCITYVILFLYSFIN . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 55197 55649 . + 0 GCA_005502385.1_01666 GCA_005502385.1_01666_gene,GCA_005502385.1_01666_mRNA GCA_005502385.1_01666 Capsule biosynthesis protein CapC GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIGSELYFSLFVGIVLSLIFAEKFGINPAGLVVPGYLALIFDQPIMLLSVLVISCLTYFIVTFGISRWVILYGRRKFAAMILTGMVLKFVFDLIYPLTPFEVVEVSGIGVVIPGIIANTIQKQGVVITLATTMLLTCITYVILFLYSFIN persistent 150 pgsC poly-gamma-glutamate biosynthesis protein PgsC GO:0016020,GO:0070501 WP_017175061.1 UPI0003028902 UniRef100_A0A4Q9WQC5,UniRef50_P96737,UniRef90_Q5HL81 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 55673 56743 . + . GCA_005502385.1_01667_gene GCA_005502385.1_01667 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKKKRLSASEWLLKQSKRHKRRNFLYTFIVLVITVVLLIFAIRAVKVEPVEAMPHSGNSIRNTYLGNITLNNDIRKVNLNDVFKSLRQPLQQSDFSTASLYVNQFSKNPKENINKNIENIMFLKKQNIKSINLINSTIDNVQAQDLSKKVEAQTDYNFLTGNGSNPINSKTVQQKVKNKKVANVSFTDIESYYEDPLKNTTSISLDPKIFVPLIKNLKENNDLVVVNVDWGIPNERNVTDRQKAYAHALVDAGADVIIGHNTVIQSIEKYKHASIFYSLGNLTSADFLSKNQKSIVVQHDWDGQHHQFQITPVRSADGKLTKDHMNSMESQRYYNNIKDKTIHLKEKNGGYSFEY . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 55673 56743 . + . GCA_005502385.1_01667_mRNA GCA_005502385.1_01667 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKKKRLSASEWLLKQSKRHKRRNFLYTFIVLVITVVLLIFAIRAVKVEPVEAMPHSGNSIRNTYLGNITLNNDIRKVNLNDVFKSLRQPLQQSDFSTASLYVNQFSKNPKENINKNIENIMFLKKQNIKSINLINSTIDNVQAQDLSKKVEAQTDYNFLTGNGSNPINSKTVQQKVKNKKVANVSFTDIESYYEDPLKNTTSISLDPKIFVPLIKNLKENNDLVVVNVDWGIPNERNVTDRQKAYAHALVDAGADVIIGHNTVIQSIEKYKHASIFYSLGNLTSADFLSKNQKSIVVQHDWDGQHHQFQITPVRSADGKLTKDHMNSMESQRYYNNIKDKTIHLKEKNGGYSFEY . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 55673 56743 . + 0 GCA_005502385.1_01667 GCA_005502385.1_01667_gene,GCA_005502385.1_01667_mRNA GCA_005502385.1_01667 Capsule biosynthesis protein CapA GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKKKRLSASEWLLKQSKRHKRRNFLYTFIVLVITVVLLIFAIRAVKVEPVEAMPHSGNSIRNTYLGNITLNNDIRKVNLNDVFKSLRQPLQQSDFSTASLYVNQFSKNPKENINKNIENIMFLKKQNIKSINLINSTIDNVQAQDLSKKVEAQTDYNFLTGNGSNPINSKTVQQKVKNKKVANVSFTDIESYYEDPLKNTTSISLDPKIFVPLIKNLKENNDLVVVNVDWGIPNERNVTDRQKAYAHALVDAGADVIIGHNTVIQSIEKYKHASIFYSLGNLTSADFLSKNQKSIVVQHDWDGQHHQFQITPVRSADGKLTKDHMNSMESQRYYNNIKDKTIHLKEKNGGYSFEY persistent 356 capA Capsule biosynthesis protein CapA WP_017175060.1 UPI00030DDC94 UniRef100_A0A4V2KX70,UniRef50_A0A1S1GWK0,UniRef90_A0A974QNX3 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 56733 56894 . + . GCA_005502385.1_01668_gene GCA_005502385.1_01668 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNIKQHWLPIVTTLIIIAILLMVTFARANEGLDNYEKNELNKATEQYLSKGAK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 56733 56894 . + . GCA_005502385.1_01668_mRNA GCA_005502385.1_01668 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNIKQHWLPIVTTLIIIAILLMVTFARANEGLDNYEKNELNKATEQYLSKGAK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 56733 56894 . + 0 GCA_005502385.1_01668 GCA_005502385.1_01668_gene,GCA_005502385.1_01668_mRNA GCA_005502385.1_01668 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNIKQHWLPIVTTLIIIAILLMVTFARANEGLDNYEKNELNKATEQYLSKGAK persistent 53 Secreted protein WP_002488200.1 UPI00024E1AEF UniRef100_A0A8X8GRW1,UniRef50_Q4A0B1,UniRef90_A0A8X8GRW1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 56896 58500 . + . GCA_005502385.1_01669_gene GCA_005502385.1_01669 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNIYNKVTLSVILVITILISFIFYFFNKEDKLDKDDLYENKIANRKSATSDEQKTYGVASNNAIATRVGNKIIEDGGNAVDAAEGVAYALAVTEPHSSGLGGGGATLTYDGKNGEEPRMYEYKTTSSFNYKKGDKIGTPGFVRGLHDMHEKEGKMDEKKILNYVIPLAEDGFEVDSELERSLKLFGSDIDRNSPFFKGKRTVREGAIVKQPALANTLKKIRDKGPDYFYNHIGKSLSKQLKNQLTEEDFKQVKTEEKKPISTKYLNNTVYAASNPLGGILMEQGLKIDESVNSANDRTDYITGIVKSRDIMYRNRDIVNGKESSSNTYLSQDYLLDKINGINFDEQGQGSDFNTQRIDNTSTTHFVVIDKNGKLASTTNTLSSFFGTGKYVKEGFYMNNSLTNFSTDPNSPNYGEKHKAPRSYTSPTIIVGPDFYMGIGSPGGNKIPTILNEVIVDYLRGNGTLQESINKPRFYNDGGTIFYENAMDDNDVNIFKSLGFGVEEKRNDPNFGSVQGAVYNKQDRTVEVGQDVGNR . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 56896 58500 . + . GCA_005502385.1_01669_mRNA GCA_005502385.1_01669 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNIYNKVTLSVILVITILISFIFYFFNKEDKLDKDDLYENKIANRKSATSDEQKTYGVASNNAIATRVGNKIIEDGGNAVDAAEGVAYALAVTEPHSSGLGGGGATLTYDGKNGEEPRMYEYKTTSSFNYKKGDKIGTPGFVRGLHDMHEKEGKMDEKKILNYVIPLAEDGFEVDSELERSLKLFGSDIDRNSPFFKGKRTVREGAIVKQPALANTLKKIRDKGPDYFYNHIGKSLSKQLKNQLTEEDFKQVKTEEKKPISTKYLNNTVYAASNPLGGILMEQGLKIDESVNSANDRTDYITGIVKSRDIMYRNRDIVNGKESSSNTYLSQDYLLDKINGINFDEQGQGSDFNTQRIDNTSTTHFVVIDKNGKLASTTNTLSSFFGTGKYVKEGFYMNNSLTNFSTDPNSPNYGEKHKAPRSYTSPTIIVGPDFYMGIGSPGGNKIPTILNEVIVDYLRGNGTLQESINKPRFYNDGGTIFYENAMDDNDVNIFKSLGFGVEEKRNDPNFGSVQGAVYNKQDRTVEVGQDVGNR . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 56896 58500 . + 0 GCA_005502385.1_01669 GCA_005502385.1_01669_gene,GCA_005502385.1_01669_mRNA GCA_005502385.1_01669 Capsule biosynthesis protein CapD proenzyme GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNIYNKVTLSVILVITILISFIFYFFNKEDKLDKDDLYENKIANRKSATSDEQKTYGVASNNAIATRVGNKIIEDGGNAVDAAEGVAYALAVTEPHSSGLGGGGATLTYDGKNGEEPRMYEYKTTSSFNYKKGDKIGTPGFVRGLHDMHEKEGKMDEKKILNYVIPLAEDGFEVDSELERSLKLFGSDIDRNSPFFKGKRTVREGAIVKQPALANTLKKIRDKGPDYFYNHIGKSLSKQLKNQLTEEDFKQVKTEEKKPISTKYLNNTVYAASNPLGGILMEQGLKIDESVNSANDRTDYITGIVKSRDIMYRNRDIVNGKESSSNTYLSQDYLLDKINGINFDEQGQGSDFNTQRIDNTSTTHFVVIDKNGKLASTTNTLSSFFGTGKYVKEGFYMNNSLTNFSTDPNSPNYGEKHKAPRSYTSPTIIVGPDFYMGIGSPGGNKIPTILNEVIVDYLRGNGTLQESINKPRFYNDGGTIFYENAMDDNDVNIFKSLGFGVEEKRNDPNFGSVQGAVYNKQDRTVEVGQDVGNR persistent 534 Gamma-glutamyltranspeptidase UniRef50_Q5HL84,UniRef90_A0A974QP10 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 58691 60172 . + . GCA_005502385.1_01670_gene GCA_005502385.1_01670 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKEAVLGIDLGTSAVKIIAVNQSGHVITSISVPLNLIQSQPGYSEQDPEEWFNAVKTGIYRLNHSDEMKSYKVKGLSFSGQMHGLVALDKEGHPVRHAILWNDTRNSEQCKQIRSVYGERLNGNPILEGFTLPKMMWVSTHEPELWKKVDVFVLPKDYVRYRLTGKIHMEYSDAASTLLLSPETHDWSKEVGDTFDIGDVYPSLVKSTDEVGTIQEPLASELGFTSSVKVFAGGGDNACGAIGAGIINDNDTLCSIGTSGVIVNVEKSNQTHYKNNIHFFDHSVPNTYYAMGVTLAAGYSLNWLKRTFFENDTFDEIVKQASTSSIGANRLLFAPYLAGERTPHGDAFIRGSFIGISGNHSKSDFARAVLEGITFSLYDSIQLMREAGKEITHITSIGGGAKSEFWLQMQADIFNASIRKLKHEEGPSMGAAMIAAYGLQWFDSFDDCVAQFIDVEHIYEPNLQRRQQYESYYNIYKQIYQHTHQLTEALLKV . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 58691 60172 . + . GCA_005502385.1_01670_mRNA GCA_005502385.1_01670 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKEAVLGIDLGTSAVKIIAVNQSGHVITSISVPLNLIQSQPGYSEQDPEEWFNAVKTGIYRLNHSDEMKSYKVKGLSFSGQMHGLVALDKEGHPVRHAILWNDTRNSEQCKQIRSVYGERLNGNPILEGFTLPKMMWVSTHEPELWKKVDVFVLPKDYVRYRLTGKIHMEYSDAASTLLLSPETHDWSKEVGDTFDIGDVYPSLVKSTDEVGTIQEPLASELGFTSSVKVFAGGGDNACGAIGAGIINDNDTLCSIGTSGVIVNVEKSNQTHYKNNIHFFDHSVPNTYYAMGVTLAAGYSLNWLKRTFFENDTFDEIVKQASTSSIGANRLLFAPYLAGERTPHGDAFIRGSFIGISGNHSKSDFARAVLEGITFSLYDSIQLMREAGKEITHITSIGGGAKSEFWLQMQADIFNASIRKLKHEEGPSMGAAMIAAYGLQWFDSFDDCVAQFIDVEHIYEPNLQRRQQYESYYNIYKQIYQHTHQLTEALLKV . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 58691 60172 . + 0 GCA_005502385.1_01670 GCA_005502385.1_01670_gene,GCA_005502385.1_01670_mRNA GCA_005502385.1_01670 Xylulose kinase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKEAVLGIDLGTSAVKIIAVNQSGHVITSISVPLNLIQSQPGYSEQDPEEWFNAVKTGIYRLNHSDEMKSYKVKGLSFSGQMHGLVALDKEGHPVRHAILWNDTRNSEQCKQIRSVYGERLNGNPILEGFTLPKMMWVSTHEPELWKKVDVFVLPKDYVRYRLTGKIHMEYSDAASTLLLSPETHDWSKEVGDTFDIGDVYPSLVKSTDEVGTIQEPLASELGFTSSVKVFAGGGDNACGAIGAGIINDNDTLCSIGTSGVIVNVEKSNQTHYKNNIHFFDHSVPNTYYAMGVTLAAGYSLNWLKRTFFENDTFDEIVKQASTSSIGANRLLFAPYLAGERTPHGDAFIRGSFIGISGNHSKSDFARAVLEGITFSLYDSIQLMREAGKEITHITSIGGGAKSEFWLQMQADIFNASIRKLKHEEGPSMGAAMIAAYGLQWFDSFDDCVAQFIDVEHIYEPNLQRRQQYESYYNIYKQIYQHTHQLTEALLKV persistent 493 xylB xylulokinase 2.7.1.17 GO:0004856,GO:0005997 UniRef50_Q8CR47,UniRef90_A0A3S7GWD4 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 60416 60709 . + . GCA_005502385.1_01671_gene GCA_005502385.1_01671 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNNTHFIDQLSHVNMIETLYLNSNDLKPSMNLFLNLLFKRLLLEYYVYIRTIYNKYACLETPFLSFQLFFNNFHELFYIMYTLIDTQNITTYSNVLE . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 60416 60709 . + . GCA_005502385.1_01671_mRNA GCA_005502385.1_01671 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNNTHFIDQLSHVNMIETLYLNSNDLKPSMNLFLNLLFKRLLLEYYVYIRTIYNKYACLETPFLSFQLFFNNFHELFYIMYTLIDTQNITTYSNVLE . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 60416 60709 . + 0 GCA_005502385.1_01671 GCA_005502385.1_01671_gene,GCA_005502385.1_01671_mRNA GCA_005502385.1_01671 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNNTHFIDQLSHVNMIETLYLNSNDLKPSMNLFLNLLFKRLLLEYYVYIRTIYNKYACLETPFLSFQLFFNNFHELFYIMYTLIDTQNITTYSNVLE persistent 97 Sugar ABC transporter permease WP_019835131.1 UPI000370EED9 UniRef100_UPI000370EED9,UniRef50_A0AAE5JMI1,UniRef90_A0AAE5JMI1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 61098 62141 . + . GCA_005502385.1_01672_gene GCA_005502385.1_01672 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNIILGVGTLVLVLIVMTLFLNFAPYGKQGLQALSGAACATFLPQAFLSYAIGGVFHIHFFQVIGDLAGSLAGVAVGILTCVNLGISPVFAVIVGLVLHDFKLLPAFIAAYIISFGIKFIEKKVPEGLDLIAVILIAPAVAFGLATVISPGVMAVLKQIGGAITAVGDSHPYALAVILGLVIPVTGMTPLSSMVLTSLLGLTGVPMAIGALTCTGASFVNYVMFSRLNIGGPSKAFAVFVEPLTQIDLIAKYPLQLYGTNALIGVVNACIVTFSGLVINVKGMATPIAGAIVLFGFNTPMKAVITIIAVAISSIILAFAISTLIKKFNLMDLSIKLPSKQKQPKESV . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 61098 62141 . + . GCA_005502385.1_01672_mRNA GCA_005502385.1_01672 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNIILGVGTLVLVLIVMTLFLNFAPYGKQGLQALSGAACATFLPQAFLSYAIGGVFHIHFFQVIGDLAGSLAGVAVGILTCVNLGISPVFAVIVGLVLHDFKLLPAFIAAYIISFGIKFIEKKVPEGLDLIAVILIAPAVAFGLATVISPGVMAVLKQIGGAITAVGDSHPYALAVILGLVIPVTGMTPLSSMVLTSLLGLTGVPMAIGALTCTGASFVNYVMFSRLNIGGPSKAFAVFVEPLTQIDLIAKYPLQLYGTNALIGVVNACIVTFSGLVINVKGMATPIAGAIVLFGFNTPMKAVITIIAVAISSIILAFAISTLIKKFNLMDLSIKLPSKQKQPKESV . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 61098 62141 . + 0 GCA_005502385.1_01672 GCA_005502385.1_01672_gene,GCA_005502385.1_01672_mRNA GCA_005502385.1_01672 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNIILGVGTLVLVLIVMTLFLNFAPYGKQGLQALSGAACATFLPQAFLSYAIGGVFHIHFFQVIGDLAGSLAGVAVGILTCVNLGISPVFAVIVGLVLHDFKLLPAFIAAYIISFGIKFIEKKVPEGLDLIAVILIAPAVAFGLATVISPGVMAVLKQIGGAITAVGDSHPYALAVILGLVIPVTGMTPLSSMVLTSLLGLTGVPMAIGALTCTGASFVNYVMFSRLNIGGPSKAFAVFVEPLTQIDLIAKYPLQLYGTNALIGVVNACIVTFSGLVINVKGMATPIAGAIVLFGFNTPMKAVITIIAVAISSIILAFAISTLIKKFNLMDLSIKLPSKQKQPKESV persistent 347 PTS sugar transporter subunit IIC WP_061544574.1 UPI000778AEE2 UniRef100_UPI000778AEE2,UniRef50_Q2FV93,UniRef90_A0A3S7GYU9 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 62144 62830 . + . GCA_005502385.1_01673_gene GCA_005502385.1_01673 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MATKKSYDYQSAFDIIGPVMMGPSSSHTAGAVKIGNAAFNVLGGIKPETLAIHYYESFAKTHQGHGTDLAIVGGAMGYSTFDNRIKDSLTIANDLGIHVDIIEEDGESIGEHPNCAYLIAEANGRHIEVIGNSIGGGTIKLRRISVEGIDVNFNHGLPILVMDGSKNKSEVNHFLNEVNELGVSIDEELVETDDDNSLVVLPLTKAIKESTLNQIKEKYNHLNISYIK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 62144 62830 . + . GCA_005502385.1_01673_mRNA GCA_005502385.1_01673 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MATKKSYDYQSAFDIIGPVMMGPSSSHTAGAVKIGNAAFNVLGGIKPETLAIHYYESFAKTHQGHGTDLAIVGGAMGYSTFDNRIKDSLTIANDLGIHVDIIEEDGESIGEHPNCAYLIAEANGRHIEVIGNSIGGGTIKLRRISVEGIDVNFNHGLPILVMDGSKNKSEVNHFLNEVNELGVSIDEELVETDDDNSLVVLPLTKAIKESTLNQIKEKYNHLNISYIK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 62144 62830 . + 0 GCA_005502385.1_01673 GCA_005502385.1_01673_gene,GCA_005502385.1_01673_mRNA GCA_005502385.1_01673 L-serine dehydratase%2C beta chain GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MATKKSYDYQSAFDIIGPVMMGPSSSHTAGAVKIGNAAFNVLGGIKPETLAIHYYESFAKTHQGHGTDLAIVGGAMGYSTFDNRIKDSLTIANDLGIHVDIIEEDGESIGEHPNCAYLIAEANGRHIEVIGNSIGGGTIKLRRISVEGIDVNFNHGLPILVMDGSKNKSEVNHFLNEVNELGVSIDEELVETDDDNSLVVLPLTKAIKESTLNQIKEKYNHLNISYIK persistent 228 L-serine ammonia-lyase 4.3.1.17 WP_017175055.1 UPI000308D616 UniRef100_A0A4Q9WRD9,UniRef50_A0A0U1E0K5,UniRef90_A0A6N0I254 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 62844 63746 . + . GCA_005502385.1_01674_gene GCA_005502385.1_01674 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MFDSIRETIDYAVENNMSFADIMIQEEMELSGQSRDEVRDLMKENLQVMRDAVVKGTTGNGVESVTGYTGHDAAKIRDYNENYHALSGHEMMEAVKGAVATNEVNAAMGIICATPTAGSSGTIPGVLFKLEKTHGLTEDQMIDFLFVASLFGRVVANNASVAGATGGCQAEVGSASAMAAAAAVSVFGGEPEASGHAMALAISNLLGLVCDPVAGLVEIPCVMRNAIGSGNALISADLALAGVKSRIPVDEVIEAMDKVGRNLPAQLRETGLGGLAGTPTGEAIKQKIFGNAEDPVNSFS . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 62844 63746 . + . GCA_005502385.1_01674_mRNA GCA_005502385.1_01674 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MFDSIRETIDYAVENNMSFADIMIQEEMELSGQSRDEVRDLMKENLQVMRDAVVKGTTGNGVESVTGYTGHDAAKIRDYNENYHALSGHEMMEAVKGAVATNEVNAAMGIICATPTAGSSGTIPGVLFKLEKTHGLTEDQMIDFLFVASLFGRVVANNASVAGATGGCQAEVGSASAMAAAAAVSVFGGEPEASGHAMALAISNLLGLVCDPVAGLVEIPCVMRNAIGSGNALISADLALAGVKSRIPVDEVIEAMDKVGRNLPAQLRETGLGGLAGTPTGEAIKQKIFGNAEDPVNSFS . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 62844 63746 . + 0 GCA_005502385.1_01674 GCA_005502385.1_01674_gene,GCA_005502385.1_01674_mRNA GCA_005502385.1_01674 L-serine dehydratase%2C alpha chain GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MFDSIRETIDYAVENNMSFADIMIQEEMELSGQSRDEVRDLMKENLQVMRDAVVKGTTGNGVESVTGYTGHDAAKIRDYNENYHALSGHEMMEAVKGAVATNEVNAAMGIICATPTAGSSGTIPGVLFKLEKTHGLTEDQMIDFLFVASLFGRVVANNASVAGATGGCQAEVGSASAMAAAAAVSVFGGEPEASGHAMALAISNLLGLVCDPVAGLVEIPCVMRNAIGSGNALISADLALAGVKSRIPVDEVIEAMDKVGRNLPAQLRETGLGGLAGTPTGEAIKQKIFGNAEDPVNSFS persistent 300 sdaAA L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha 4.3.1.17 GO:0003941,GO:0006094,GO:0006565 WP_061544575.1 UPI000778C0F8 UniRef100_UPI000778C0F8,UniRef50_A0AAN1D8A6,UniRef90_A0A3S7GVK2 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 63888 64091 . + . GCA_005502385.1_01675_gene GCA_005502385.1_01675 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MLRLYLLFLAFIINTTLTRVWTIEGTWENLLLQSMSMSIMFVFLFYYVCFMLENRKHEKIDSLRDEE . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 63888 64091 . + . GCA_005502385.1_01675_mRNA GCA_005502385.1_01675 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MLRLYLLFLAFIINTTLTRVWTIEGTWENLLLQSMSMSIMFVFLFYYVCFMLENRKHEKIDSLRDEE . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 63888 64091 . + 0 GCA_005502385.1_01675 GCA_005502385.1_01675_gene,GCA_005502385.1_01675_mRNA GCA_005502385.1_01675 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MLRLYLLFLAFIINTTLTRVWTIEGTWENLLLQSMSMSIMFVFLFYYVCFMLENRKHEKIDSLRDEE persistent 67 hypothetical protein WP_017175053.1 UPI0003644B6C UniRef100_A0A4Q9WSI9,UniRef50_Q5HL96,UniRef90_A0AAE5JMK0 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 64145 64642 . - . GCA_005502385.1_01676_gene GCA_005502385.1_01676 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIRKAERKDLPDILNIYNDAILNTTAVYTYNPQSLDEREAWFETKVLAHEPIFIFEIDNKVAGFATYGQFRNWPAYLYSIEHSIYVNKDYRGRGVASHLLEHLIDDAKHRQYRTIVAGIDASNEASIKLHEKFNFKHAGTIENVGYKFERWLDLAFYQYDLNTDK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 64145 64642 . - . GCA_005502385.1_01676_mRNA GCA_005502385.1_01676 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIRKAERKDLPDILNIYNDAILNTTAVYTYNPQSLDEREAWFETKVLAHEPIFIFEIDNKVAGFATYGQFRNWPAYLYSIEHSIYVNKDYRGRGVASHLLEHLIDDAKHRQYRTIVAGIDASNEASIKLHEKFNFKHAGTIENVGYKFERWLDLAFYQYDLNTDK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 64145 64642 . - 0 GCA_005502385.1_01676 GCA_005502385.1_01676_gene,GCA_005502385.1_01676_mRNA GCA_005502385.1_01676 L-methionine sulfoximine/L-methionine sulfone acetyltransferase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIRKAERKDLPDILNIYNDAILNTTAVYTYNPQSLDEREAWFETKVLAHEPIFIFEIDNKVAGFATYGQFRNWPAYLYSIEHSIYVNKDYRGRGVASHLLEHLIDDAKHRQYRTIVAGIDASNEASIKLHEKFNFKHAGTIENVGYKFERWLDLAFYQYDLNTDK persistent 165 GNAT family N-acetyltransferase 2.3.1.- WP_049414301.1 UPI00066D52BD UniRef100_UPI00066D52BD,UniRef50_A0A2T4SEK0,UniRef90_A0A3S7GZF3 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 64791 65396 . + . GCA_005502385.1_01677_gene GCA_005502385.1_01677 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKNWTNRLMTIIGVILILVAVYLFAKPYIDNYLHEKDNDDKIEQYDKNDKSNTSKEKPTIPKDKSKMAGYISVPDAEIKEPVYPGPATPEQLNRGVSFAEDDESLDDQNISIAGHTFTDRPHYQFTNLKAAKKGSKVYFKVGDETREYKMTSIRDVDPEDVQVLDEHKGETNQLTLITCDNYNQQTGVWEKRKIFVAKQIK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 64791 65396 . + . GCA_005502385.1_01677_mRNA GCA_005502385.1_01677 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKNWTNRLMTIIGVILILVAVYLFAKPYIDNYLHEKDNDDKIEQYDKNDKSNTSKEKPTIPKDKSKMAGYISVPDAEIKEPVYPGPATPEQLNRGVSFAEDDESLDDQNISIAGHTFTDRPHYQFTNLKAAKKGSKVYFKVGDETREYKMTSIRDVDPEDVQVLDEHKGETNQLTLITCDNYNQQTGVWEKRKIFVAKQIK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 64791 65396 . + 0 GCA_005502385.1_01677 GCA_005502385.1_01677_gene,GCA_005502385.1_01677_mRNA GCA_005502385.1_01677 Sortase A GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKNWTNRLMTIIGVILILVAVYLFAKPYIDNYLHEKDNDDKIEQYDKNDKSNTSKEKPTIPKDKSKMAGYISVPDAEIKEPVYPGPATPEQLNRGVSFAEDDESLDDQNISIAGHTFTDRPHYQFTNLKAAKKGSKVYFKVGDETREYKMTSIRDVDPEDVQVLDEHKGETNQLTLITCDNYNQQTGVWEKRKIFVAKQIK persistent 201 srtA class A sortase SrtA WP_017175051.1 UPI0003179D1A UniRef100_A0A8X8GTE9,UniRef50_Q2FV99,UniRef90_A0A8X8GTE9 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 65574 66383 . + . GCA_005502385.1_01678_gene GCA_005502385.1_01678 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIRAIAVDMDGTFLDTNKEYDKARFEIIYQELKRRHIEFIAASGNQYAKLKSIFGERDMYFISENGAVIYHGNQLYNYRSFDQTIYEKVVNYIHLDQHIDEFIVCGLKSAYILKDTSEAFKKDAHFYYRQLEEIDTFQPLPNDEYVKIALNINRETHPTLDTDLETKFKEEIKLVSSGHDSIDIIMPNMTKGQALKRLLKKWEMSPSELMAFGDANNDKDMLEFAEHSYVMANSHDQSLFDIAKFIAPSNDEQGVLQIIEEKVLKSETE . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 65574 66383 . + . GCA_005502385.1_01678_mRNA GCA_005502385.1_01678 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIRAIAVDMDGTFLDTNKEYDKARFEIIYQELKRRHIEFIAASGNQYAKLKSIFGERDMYFISENGAVIYHGNQLYNYRSFDQTIYEKVVNYIHLDQHIDEFIVCGLKSAYILKDTSEAFKKDAHFYYRQLEEIDTFQPLPNDEYVKIALNINRETHPTLDTDLETKFKEEIKLVSSGHDSIDIIMPNMTKGQALKRLLKKWEMSPSELMAFGDANNDKDMLEFAEHSYVMANSHDQSLFDIAKFIAPSNDEQGVLQIIEEKVLKSETE . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 65574 66383 . + 0 GCA_005502385.1_01678 GCA_005502385.1_01678_gene,GCA_005502385.1_01678_mRNA GCA_005502385.1_01678 Sugar phosphatase YbiV GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIRAIAVDMDGTFLDTNKEYDKARFEIIYQELKRRHIEFIAASGNQYAKLKSIFGERDMYFISENGAVIYHGNQLYNYRSFDQTIYEKVVNYIHLDQHIDEFIVCGLKSAYILKDTSEAFKKDAHFYYRQLEEIDTFQPLPNDEYVKIALNINRETHPTLDTDLETKFKEEIKLVSSGHDSIDIIMPNMTKGQALKRLLKKWEMSPSELMAFGDANNDKDMLEFAEHSYVMANSHDQSLFDIAKFIAPSNDEQGVLQIIEEKVLKSETE persistent 269 Cof-type HAD-IIB family hydrolase WP_048762239.1 UPI00065FD10C UniRef100_UPI00065FD10C,UniRef50_Q2FVA2,UniRef90_A0A3S7GW81 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 66473 67465 . - . GCA_005502385.1_01679_gene GCA_005502385.1_01679 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTKIMFFGTRDYEKKDALNWGKEHNVEVVTSEEILSEDTVDQLEGFDGVTTMQFGKLSDSVYPKLEKYGIKQIAQRTAGFDMYDLDLAKKHNIVISNVPSYSPETIAEYSVSIALQLVRKFPAIEKRVQEHNFKWAAPIMSTPVKNMTVAIIGTGRIGAATGKIYAGFGAKVVGYDAYPNNSLDFLEYKDSVEEAIADADIISLHVPANKESFHLFNADMFSKVKKGAVLVNAARGAVIDTPALIDAVNDGTLYGAAIDTYENEADYFTYDWTGKEIEDKTLLELIENENILVTPHIAFFSDEAVRNLVEGGLNAALSVINTGKCDTQLN . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 66473 67465 . - . GCA_005502385.1_01679_mRNA GCA_005502385.1_01679 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTKIMFFGTRDYEKKDALNWGKEHNVEVVTSEEILSEDTVDQLEGFDGVTTMQFGKLSDSVYPKLEKYGIKQIAQRTAGFDMYDLDLAKKHNIVISNVPSYSPETIAEYSVSIALQLVRKFPAIEKRVQEHNFKWAAPIMSTPVKNMTVAIIGTGRIGAATGKIYAGFGAKVVGYDAYPNNSLDFLEYKDSVEEAIADADIISLHVPANKESFHLFNADMFSKVKKGAVLVNAARGAVIDTPALIDAVNDGTLYGAAIDTYENEADYFTYDWTGKEIEDKTLLELIENENILVTPHIAFFSDEAVRNLVEGGLNAALSVINTGKCDTQLN . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 66473 67465 . - 0 GCA_005502385.1_01679 GCA_005502385.1_01679_gene,GCA_005502385.1_01679_mRNA GCA_005502385.1_01679 D-lactate dehydrogenase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTKIMFFGTRDYEKKDALNWGKEHNVEVVTSEEILSEDTVDQLEGFDGVTTMQFGKLSDSVYPKLEKYGIKQIAQRTAGFDMYDLDLAKKHNIVISNVPSYSPETIAEYSVSIALQLVRKFPAIEKRVQEHNFKWAAPIMSTPVKNMTVAIIGTGRIGAATGKIYAGFGAKVVGYDAYPNNSLDFLEYKDSVEEAIADADIISLHVPANKESFHLFNADMFSKVKKGAVLVNAARGAVIDTPALIDAVNDGTLYGAAIDTYENEADYFTYDWTGKEIEDKTLLELIENENILVTPHIAFFSDEAVRNLVEGGLNAALSVINTGKCDTQLN persistent 330 D-lactate dehydrogenase 1.1.1.28 WP_019834958.1 UPI0003662A71 UniRef100_A0A8I0WAV2,UniRef50_P63940,UniRef90_A0A380FXX5 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 67783 68451 . + . GCA_005502385.1_01680_gene GCA_005502385.1_01680 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTINQIQNTIIDAFKFRFATKEFDTTKKISDSEFNTILEAGRLSPSSLGLEPWRFLVIQNETLREKLIPYSSGAQKQLKSASHFVLILARKNVTQTSDYVQSFIRGIKQYEESTIPMFKDKIQGFQTRFHINDNARTILDWASKQTYIALGNMMTAAALMNIDSCPMEGFDLDGVTELLEHEGIIDSNQFAPSVMVAFGYRKENPTKPKTRQPQEDVIEWLN . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 67783 68451 . + . GCA_005502385.1_01680_mRNA GCA_005502385.1_01680 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTINQIQNTIIDAFKFRFATKEFDTTKKISDSEFNTILEAGRLSPSSLGLEPWRFLVIQNETLREKLIPYSSGAQKQLKSASHFVLILARKNVTQTSDYVQSFIRGIKQYEESTIPMFKDKIQGFQTRFHINDNARTILDWASKQTYIALGNMMTAAALMNIDSCPMEGFDLDGVTELLEHEGIIDSNQFAPSVMVAFGYRKENPTKPKTRQPQEDVIEWLN . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 67783 68451 . + 0 GCA_005502385.1_01680 GCA_005502385.1_01680_gene,GCA_005502385.1_01680_mRNA GCA_005502385.1_01680 Putative NAD(P)H nitroreductase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTINQIQNTIIDAFKFRFATKEFDTTKKISDSEFNTILEAGRLSPSSLGLEPWRFLVIQNETLREKLIPYSSGAQKQLKSASHFVLILARKNVTQTSDYVQSFIRGIKQYEESTIPMFKDKIQGFQTRFHINDNARTILDWASKQTYIALGNMMTAAALMNIDSCPMEGFDLDGVTELLEHEGIIDSNQFAPSVMVAFGYRKENPTKPKTRQPQEDVIEWLN persistent 222 NAD(P)H-dependent oxidoreductase UniRef50_O34475,UniRef90_A0A8I0WBA4 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 68582 70075 . + . GCA_005502385.1_01681_gene GCA_005502385.1_01681 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAKVNVRDFLDEQYDLFINGEFQPSESGETLTVTNPANGEELAKVAKANEKDVDKAVQSAHDAFDSWSKISKAERADYLLEISRRIEENKEHLATVESLQNGKPYRETSTIDIPQVAEQFKYFAGVLTTDEGSVNQIDNNTMSLVVNEPVGVVGAVVAWNFPILLASWKLGPALAAGNTVVIQPSSSTPLSLIELAKILQDVLPKGVVNVITGKGSESGDAIFKHEGVNKLSFTGSTDVGYGVAKAGAERIVPTTLELGGKSANIIFDDANLDQVIEGVQLGILFNQGEVCSAGSRLLVQSSLYDKLLPKLKEAFENIKVGDPFAEDTKMGAQTGPEQIEKIESYIKLAEEDDKANILTGGHRITDNGLDKGYFFEPTIIELSDNSHKLAQEEIFGPVVVVEKFEDEEEAINIANDSEYGLAGGVFTTNLLRALNVAKAIRTGRIWVNTYNQIPAGAPFGGYKKSGIGREVYKDAIKNYQQVKNIFIDTSNETKGLY . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 68582 70075 . + . GCA_005502385.1_01681_mRNA GCA_005502385.1_01681 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAKVNVRDFLDEQYDLFINGEFQPSESGETLTVTNPANGEELAKVAKANEKDVDKAVQSAHDAFDSWSKISKAERADYLLEISRRIEENKEHLATVESLQNGKPYRETSTIDIPQVAEQFKYFAGVLTTDEGSVNQIDNNTMSLVVNEPVGVVGAVVAWNFPILLASWKLGPALAAGNTVVIQPSSSTPLSLIELAKILQDVLPKGVVNVITGKGSESGDAIFKHEGVNKLSFTGSTDVGYGVAKAGAERIVPTTLELGGKSANIIFDDANLDQVIEGVQLGILFNQGEVCSAGSRLLVQSSLYDKLLPKLKEAFENIKVGDPFAEDTKMGAQTGPEQIEKIESYIKLAEEDDKANILTGGHRITDNGLDKGYFFEPTIIELSDNSHKLAQEEIFGPVVVVEKFEDEEEAINIANDSEYGLAGGVFTTNLLRALNVAKAIRTGRIWVNTYNQIPAGAPFGGYKKSGIGREVYKDAIKNYQQVKNIFIDTSNETKGLY . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 68582 70075 . + 0 GCA_005502385.1_01681 GCA_005502385.1_01681_gene,GCA_005502385.1_01681_mRNA GCA_005502385.1_01681 Putative aldehyde dehydrogenase AldA GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAKVNVRDFLDEQYDLFINGEFQPSESGETLTVTNPANGEELAKVAKANEKDVDKAVQSAHDAFDSWSKISKAERADYLLEISRRIEENKEHLATVESLQNGKPYRETSTIDIPQVAEQFKYFAGVLTTDEGSVNQIDNNTMSLVVNEPVGVVGAVVAWNFPILLASWKLGPALAAGNTVVIQPSSSTPLSLIELAKILQDVLPKGVVNVITGKGSESGDAIFKHEGVNKLSFTGSTDVGYGVAKAGAERIVPTTLELGGKSANIIFDDANLDQVIEGVQLGILFNQGEVCSAGSRLLVQSSLYDKLLPKLKEAFENIKVGDPFAEDTKMGAQTGPEQIEKIESYIKLAEEDDKANILTGGHRITDNGLDKGYFFEPTIIELSDNSHKLAQEEIFGPVVVVEKFEDEEEAINIANDSEYGLAGGVFTTNLLRALNVAKAIRTGRIWVNTYNQIPAGAPFGGYKKSGIGREVYKDAIKNYQQVKNIFIDTSNETKGLY persistent 497 Aldehyde dehydrogenase UniRef50_Q2G1J0,UniRef90_A0A7Z1SCE6 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 70407 71315 . + . GCA_005502385.1_01682_gene GCA_005502385.1_01682 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKRLKFLVIYLVITIIVSGCSNIDNVKHPKEAYTPKSLTVGFIPSQNAQILNAKVKPLQQLLSDELEVPVKVHIATNYNTMIEGLKSKKIDIAFISPVSYTLAHDAHAADVLLKSKGYLVDNKGNQTHHLVDYYRSQIVVRKDSNINHLKDLKDKKIALQDVESTSGYIYPLATLMEKGIKKSDIQIQQVKGHDQGLIALLNHDVEAVATYQDARADLKKDDPDIYQETKVIYRTKKIPNDTISVRNDMSNKWKNKISQAFINISHTKKGKQIISDIYGHQGYEKAKDSDFDTVRKYRDFVD . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 70407 71315 . + . GCA_005502385.1_01682_mRNA GCA_005502385.1_01682 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKRLKFLVIYLVITIIVSGCSNIDNVKHPKEAYTPKSLTVGFIPSQNAQILNAKVKPLQQLLSDELEVPVKVHIATNYNTMIEGLKSKKIDIAFISPVSYTLAHDAHAADVLLKSKGYLVDNKGNQTHHLVDYYRSQIVVRKDSNINHLKDLKDKKIALQDVESTSGYIYPLATLMEKGIKKSDIQIQQVKGHDQGLIALLNHDVEAVATYQDARADLKKDDPDIYQETKVIYRTKKIPNDTISVRNDMSNKWKNKISQAFINISHTKKGKQIISDIYGHQGYEKAKDSDFDTVRKYRDFVD . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 70407 71315 . + 0 GCA_005502385.1_01682 GCA_005502385.1_01682_gene,GCA_005502385.1_01682_mRNA GCA_005502385.1_01682 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKRLKFLVIYLVITIIVSGCSNIDNVKHPKEAYTPKSLTVGFIPSQNAQILNAKVKPLQQLLSDELEVPVKVHIATNYNTMIEGLKSKKIDIAFISPVSYTLAHDAHAADVLLKSKGYLVDNKGNQTHHLVDYYRSQIVVRKDSNINHLKDLKDKKIALQDVESTSGYIYPLATLMEKGIKKSDIQIQQVKGHDQGLIALLNHDVEAVATYQDARADLKKDDPDIYQETKVIYRTKKIPNDTISVRNDMSNKWKNKISQAFINISHTKKGKQIISDIYGHQGYEKAKDSDFDTVRKYRDFVD persistent 302 Phosphonate ABC transporter substrate-binding protein WP_049416339.1 UPI00066AA9D3 UniRef100_UPI00066AA9D3,UniRef50_A0A380FWA2,UniRef90_A0A3S7GW71 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 71348 72154 . - . GCA_005502385.1_01683_gene GCA_005502385.1_01683 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTTFHSKEAMQVTNVTLNVKDLNKMNHFYSEVLGFSIKKKTGTQTIFNVGEHGHTLTLHLLDHGRHPEFREAGLFHIAYLLPSRQDLANFLYHMSSLNQPVGGGDHLVSEALYFNDPEGNGIEVYQDRPSSGWEWENGFIKMDTLEVDAQDLISHRTENGWQGFPSDGKLGHLHLKTHNLVEARQFYIDQLGFEHISNLPQSLFISTQHYHHHIAVNTWQSNQVNPDNKNTYGLTHIDIYQPHAKETNLTSPEGFSMTIHGDVSVVPD . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 71348 72154 . - . GCA_005502385.1_01683_mRNA GCA_005502385.1_01683 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTTFHSKEAMQVTNVTLNVKDLNKMNHFYSEVLGFSIKKKTGTQTIFNVGEHGHTLTLHLLDHGRHPEFREAGLFHIAYLLPSRQDLANFLYHMSSLNQPVGGGDHLVSEALYFNDPEGNGIEVYQDRPSSGWEWENGFIKMDTLEVDAQDLISHRTENGWQGFPSDGKLGHLHLKTHNLVEARQFYIDQLGFEHISNLPQSLFISTQHYHHHIAVNTWQSNQVNPDNKNTYGLTHIDIYQPHAKETNLTSPEGFSMTIHGDVSVVPD . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 71348 72154 . - 0 GCA_005502385.1_01683 GCA_005502385.1_01683_gene,GCA_005502385.1_01683_mRNA GCA_005502385.1_01683 Catechol-2%2C3-dioxygenase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTTFHSKEAMQVTNVTLNVKDLNKMNHFYSEVLGFSIKKKTGTQTIFNVGEHGHTLTLHLLDHGRHPEFREAGLFHIAYLLPSRQDLANFLYHMSSLNQPVGGGDHLVSEALYFNDPEGNGIEVYQDRPSSGWEWENGFIKMDTLEVDAQDLISHRTENGWQGFPSDGKLGHLHLKTHNLVEARQFYIDQLGFEHISNLPQSLFISTQHYHHHIAVNTWQSNQVNPDNKNTYGLTHIDIYQPHAKETNLTSPEGFSMTIHGDVSVVPD persistent 268 VOC family protein WP_019834962.1 UPI00037BAA69 UniRef100_A0A8I0W8N4,UniRef50_A0A6L9GI04,UniRef90_A0A6N0I262 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 72282 72563 . - . GCA_005502385.1_01684_gene GCA_005502385.1_01684 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAEEIKQGNNKFYVGEDENNPKAEITYKQVDNNEIEIDHTGVSDELGGQGLGTKLVDAVVEHARQNNLKIIASCPFAKDVLEKNDSYQDVYLG . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 72282 72563 . - . GCA_005502385.1_01684_mRNA GCA_005502385.1_01684 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAEEIKQGNNKFYVGEDENNPKAEITYKQVDNNEIEIDHTGVSDELGGQGLGTKLVDAVVEHARQNNLKIIASCPFAKDVLEKNDSYQDVYLG . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 72282 72563 . - 0 GCA_005502385.1_01684 GCA_005502385.1_01684_gene,GCA_005502385.1_01684_mRNA GCA_005502385.1_01684 putative protein YjdJ GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAEEIKQGNNKFYVGEDENNPKAEITYKQVDNNEIEIDHTGVSDELGGQGLGTKLVDAVVEHARQNNLKIIASCPFAKDVLEKNDSYQDVYLG persistent 93 Acetyltransferase WP_002448625.1 UPI00019FCB54 UniRef100_A0A6N0I288,UniRef50_Q4L916,UniRef90_A0A380FXG9 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 72745 73701 . + . GCA_005502385.1_01685_gene GCA_005502385.1_01685 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKMIAIISLMCLCLILSACSTNRDITHKHKKVTTENKLKIYTTVFAFESFTKQIGGKYVDVDTIYPPGADMHTYEPSQRDMINIAKSDLFVYSSDHLDPVAAKITKSMNNNDMKLAVANSLNKQILVNEDDDHDEHGHHHEATSYDPHVWLDPVLDQQFAKKIKDDLVHKDPTHRIYYEHNYKQLVEDLKQIDHTLSNITTRPKRDKVIISHDSLGYLARRYHFEQKGVSGMNNKEPSQKDILALINQIKDTHEPYILYEQNISSKITDVIRQETQTQPVNFNNLAVLSQSQSEDQTLTFQSIMKKNIQALDKALNK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 72745 73701 . + . GCA_005502385.1_01685_mRNA GCA_005502385.1_01685 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKMIAIISLMCLCLILSACSTNRDITHKHKKVTTENKLKIYTTVFAFESFTKQIGGKYVDVDTIYPPGADMHTYEPSQRDMINIAKSDLFVYSSDHLDPVAAKITKSMNNNDMKLAVANSLNKQILVNEDDDHDEHGHHHEATSYDPHVWLDPVLDQQFAKKIKDDLVHKDPTHRIYYEHNYKQLVEDLKQIDHTLSNITTRPKRDKVIISHDSLGYLARRYHFEQKGVSGMNNKEPSQKDILALINQIKDTHEPYILYEQNISSKITDVIRQETQTQPVNFNNLAVLSQSQSEDQTLTFQSIMKKNIQALDKALNK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 72745 73701 . + 0 GCA_005502385.1_01685 GCA_005502385.1_01685_gene,GCA_005502385.1_01685_mRNA GCA_005502385.1_01685 High-affinity zinc uptake system binding-protein ZnuA GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKMIAIISLMCLCLILSACSTNRDITHKHKKVTTENKLKIYTTVFAFESFTKQIGGKYVDVDTIYPPGADMHTYEPSQRDMINIAKSDLFVYSSDHLDPVAAKITKSMNNNDMKLAVANSLNKQILVNEDDDHDEHGHHHEATSYDPHVWLDPVLDQQFAKKIKDDLVHKDPTHRIYYEHNYKQLVEDLKQIDHTLSNITTRPKRDKVIISHDSLGYLARRYHFEQKGVSGMNNKEPSQKDILALINQIKDTHEPYILYEQNISSKITDVIRQETQTQPVNFNNLAVLSQSQSEDQTLTFQSIMKKNIQALDKALNK persistent 318 ABC transporter substrate-binding protein UniRef50_B9DL09,UniRef90_A0A3S7GZU1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 73761 75185 . - . GCA_005502385.1_01686_gene GCA_005502385.1_01686 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTNQLFINNEFVESKSNETMDVINPATGETIDTITFATEEEVNDAIEKSKHAQLEWEKVPAPTRAEHVKLLIPLLEQHKDDIAHLYVKEQGKTIVQAKGEIDKSIEFIDYMASLSMSNKGEVLQNSIVNETIQLTKKPIGVTAGIVPWNAPILVLMRKVIPAIVTGCSVVIKPSEETTLLTLKIAELFRDSTIPAGLIQIVPGTGETVGTQLATHKDIQLVSLTGSMGAGKAVFKNAADSIKKLNLELGGNAPVLVTQHADLDKAVDYIVTARINNAGQVCTCPERIFVHEDVHDDFINKVKDKMDALQVGDPYDENTDYGAIINQKQLDSIDDKVQEAVKNGADLVLGGYKLDREGFFYAPTILDHVKTTDSAFKEEIFGPVLAITTYTNFDDVIDMANDTNAGLSSYIFSENLKEIMTATERLKFGEVYANCEAEEAVNGYHAGWRESGLGGADGIHGFEEYYNTTVSYIRW . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 73761 75185 . - . GCA_005502385.1_01686_mRNA GCA_005502385.1_01686 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTNQLFINNEFVESKSNETMDVINPATGETIDTITFATEEEVNDAIEKSKHAQLEWEKVPAPTRAEHVKLLIPLLEQHKDDIAHLYVKEQGKTIVQAKGEIDKSIEFIDYMASLSMSNKGEVLQNSIVNETIQLTKKPIGVTAGIVPWNAPILVLMRKVIPAIVTGCSVVIKPSEETTLLTLKIAELFRDSTIPAGLIQIVPGTGETVGTQLATHKDIQLVSLTGSMGAGKAVFKNAADSIKKLNLELGGNAPVLVTQHADLDKAVDYIVTARINNAGQVCTCPERIFVHEDVHDDFINKVKDKMDALQVGDPYDENTDYGAIINQKQLDSIDDKVQEAVKNGADLVLGGYKLDREGFFYAPTILDHVKTTDSAFKEEIFGPVLAITTYTNFDDVIDMANDTNAGLSSYIFSENLKEIMTATERLKFGEVYANCEAEEAVNGYHAGWRESGLGGADGIHGFEEYYNTTVSYIRW . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 73761 75185 . - 0 GCA_005502385.1_01686 GCA_005502385.1_01686_gene,GCA_005502385.1_01686_mRNA GCA_005502385.1_01686 Lactaldehyde dehydrogenase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTNQLFINNEFVESKSNETMDVINPATGETIDTITFATEEEVNDAIEKSKHAQLEWEKVPAPTRAEHVKLLIPLLEQHKDDIAHLYVKEQGKTIVQAKGEIDKSIEFIDYMASLSMSNKGEVLQNSIVNETIQLTKKPIGVTAGIVPWNAPILVLMRKVIPAIVTGCSVVIKPSEETTLLTLKIAELFRDSTIPAGLIQIVPGTGETVGTQLATHKDIQLVSLTGSMGAGKAVFKNAADSIKKLNLELGGNAPVLVTQHADLDKAVDYIVTARINNAGQVCTCPERIFVHEDVHDDFINKVKDKMDALQVGDPYDENTDYGAIINQKQLDSIDDKVQEAVKNGADLVLGGYKLDREGFFYAPTILDHVKTTDSAFKEEIFGPVLAITTYTNFDDVIDMANDTNAGLSSYIFSENLKEIMTATERLKFGEVYANCEAEEAVNGYHAGWRESGLGGADGIHGFEEYYNTTVSYIRW persistent 474 aldA aldehyde dehydrogenase 1.2.1.- GO:0016620 WP_017175042.1 UPI00031C0D45 UniRef100_A0A3S7GVL0,UniRef50_A0A1D4HJ09,UniRef90_A0A3S7GVL0 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 75261 76346 . - . GCA_005502385.1_01687_gene GCA_005502385.1_01687 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKVLKESMIVAFAFVGVVVGAGFATGQEIFQFFTSNGQFSVLGIIITGLIITLGGMFVLNTGYNIKSHNHSESIHYYLHPMIARLFDIVLTLFLFSLAIIMSAGGASTIQESFHLPYWLSSLILVSLILVTLFLKFDRLIAVLGIVTPFLVIVVTIIAIYYLATGHLDFESANQYAQHKSSISLGWWFDGINYASLQIAAAFSFLSVMGGRLHDQRASIWGGLIGGVIITFLLLMINLGLITKFNDIKSVALPTLLLARHISPILGTIMSIIMILVIYNTIVGLMYAFASRFTTPFSKQYFVLIIVMTIVTFICTFIGFISLIGKVFPIMGLFGFILLIPILYKGVRHFKYSKKEGSKGAH . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 75261 76346 . - . GCA_005502385.1_01687_mRNA GCA_005502385.1_01687 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKVLKESMIVAFAFVGVVVGAGFATGQEIFQFFTSNGQFSVLGIIITGLIITLGGMFVLNTGYNIKSHNHSESIHYYLHPMIARLFDIVLTLFLFSLAIIMSAGGASTIQESFHLPYWLSSLILVSLILVTLFLKFDRLIAVLGIVTPFLVIVVTIIAIYYLATGHLDFESANQYAQHKSSISLGWWFDGINYASLQIAAAFSFLSVMGGRLHDQRASIWGGLIGGVIITFLLLMINLGLITKFNDIKSVALPTLLLARHISPILGTIMSIIMILVIYNTIVGLMYAFASRFTTPFSKQYFVLIIVMTIVTFICTFIGFISLIGKVFPIMGLFGFILLIPILYKGVRHFKYSKKEGSKGAH . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 75261 76346 . - 0 GCA_005502385.1_01687 GCA_005502385.1_01687_gene,GCA_005502385.1_01687_mRNA GCA_005502385.1_01687 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKVLKESMIVAFAFVGVVVGAGFATGQEIFQFFTSNGQFSVLGIIITGLIITLGGMFVLNTGYNIKSHNHSESIHYYLHPMIARLFDIVLTLFLFSLAIIMSAGGASTIQESFHLPYWLSSLILVSLILVTLFLKFDRLIAVLGIVTPFLVIVVTIIAIYYLATGHLDFESANQYAQHKSSISLGWWFDGINYASLQIAAAFSFLSVMGGRLHDQRASIWGGLIGGVIITFLLLMINLGLITKFNDIKSVALPTLLLARHISPILGTIMSIIMILVIYNTIVGLMYAFASRFTTPFSKQYFVLIIVMTIVTFICTFIGFISLIGKVFPIMGLFGFILLIPILYKGVRHFKYSKKEGSKGAH persistent 361 Branched-chain amino acid transport system II carrier protein WP_017175041.1 UPI00031FC848 UniRef100_A0A3S7GVT4,UniRef50_Q2FVB0,UniRef90_A0A3S7GVT4 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 76628 78412 . + . GCA_005502385.1_01688_gene GCA_005502385.1_01688 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MLFDLPVMLVIVLFLALGIFSQWLANRIKWPSIVVMSIVGLLVGPILGLANPEHTLGSEIFSPIVSLAVAIILFEGSSNLDFRELKGISKAVIRIITIGATIAWVLGAIALHKILGFPISIAIVMGGLLLITGPTVIQPLLKQAKVRNSVDTVLRWESIILDPLGPILALAAFYVYQIIGQGFGFQLLFIFIFKMLVVALIGFGASFFFNWLIQRDVIPQNLMPSIQLVFILLVFSICDQILDESGLLAVTIFGLMMARYKRHDLIYKESDHFIENMSSILVSTVFILITSSLTPSVLMNVLSWKLVIFSLVMIVLVRPIAVLLSTIGTEITKKERALVGMMAPRGIVVLTVAQFFGGLFLNDNMKMASYITPVTFGLVFITVVIYGFSFTPISKMLGLASTEPPGVILVGESEFSYHLGTQLQSHGIPVMVFNLFSNTSDKAEELGFEIFKGNLLSSSDRMYADLIRYNKCLLMTKSFIFNSLAFNELVPEFGLNNVNMMPVSFTDDQARNNLNGPLRNHILFDEKHSPRWFDNVITNQNIVEVPASSYHDITDKDMIIYHISDDKEATFHRSTKSMDEYDNGTYGILRNVYQ . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 76628 78412 . + . GCA_005502385.1_01688_mRNA GCA_005502385.1_01688 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MLFDLPVMLVIVLFLALGIFSQWLANRIKWPSIVVMSIVGLLVGPILGLANPEHTLGSEIFSPIVSLAVAIILFEGSSNLDFRELKGISKAVIRIITIGATIAWVLGAIALHKILGFPISIAIVMGGLLLITGPTVIQPLLKQAKVRNSVDTVLRWESIILDPLGPILALAAFYVYQIIGQGFGFQLLFIFIFKMLVVALIGFGASFFFNWLIQRDVIPQNLMPSIQLVFILLVFSICDQILDESGLLAVTIFGLMMARYKRHDLIYKESDHFIENMSSILVSTVFILITSSLTPSVLMNVLSWKLVIFSLVMIVLVRPIAVLLSTIGTEITKKERALVGMMAPRGIVVLTVAQFFGGLFLNDNMKMASYITPVTFGLVFITVVIYGFSFTPISKMLGLASTEPPGVILVGESEFSYHLGTQLQSHGIPVMVFNLFSNTSDKAEELGFEIFKGNLLSSSDRMYADLIRYNKCLLMTKSFIFNSLAFNELVPEFGLNNVNMMPVSFTDDQARNNLNGPLRNHILFDEKHSPRWFDNVITNQNIVEVPASSYHDITDKDMIIYHISDDKEATFHRSTKSMDEYDNGTYGILRNVYQ . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 76628 78412 . + 0 GCA_005502385.1_01688 GCA_005502385.1_01688_gene,GCA_005502385.1_01688_mRNA GCA_005502385.1_01688 K(+)/H(+) antiporter NhaP2 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MLFDLPVMLVIVLFLALGIFSQWLANRIKWPSIVVMSIVGLLVGPILGLANPEHTLGSEIFSPIVSLAVAIILFEGSSNLDFRELKGISKAVIRIITIGATIAWVLGAIALHKILGFPISIAIVMGGLLLITGPTVIQPLLKQAKVRNSVDTVLRWESIILDPLGPILALAAFYVYQIIGQGFGFQLLFIFIFKMLVVALIGFGASFFFNWLIQRDVIPQNLMPSIQLVFILLVFSICDQILDESGLLAVTIFGLMMARYKRHDLIYKESDHFIENMSSILVSTVFILITSSLTPSVLMNVLSWKLVIFSLVMIVLVRPIAVLLSTIGTEITKKERALVGMMAPRGIVVLTVAQFFGGLFLNDNMKMASYITPVTFGLVFITVVIYGFSFTPISKMLGLASTEPPGVILVGESEFSYHLGTQLQSHGIPVMVFNLFSNTSDKAEELGFEIFKGNLLSSSDRMYADLIRYNKCLLMTKSFIFNSLAFNELVPEFGLNNVNMMPVSFTDDQARNNLNGPLRNHILFDEKHSPRWFDNVITNQNIVEVPASSYHDITDKDMIIYHISDDKEATFHRSTKSMDEYDNGTYGILRNVYQ persistent 594 Sodium:proton antiporter WP_137689628.1 UPI0010F89128 UniRef100_UPI0010F89128,UniRef50_Q4A072,UniRef90_A0A3S7GZG1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 78466 80430 . - . GCA_005502385.1_01689_gene GCA_005502385.1_01689 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSQSTESELKKKYLDLLSQQFDSPEKLATEIINLESVLELPKGTEHFVSDLHGEYKSFQHVLRNGSGNVRAKINDIFAGNISQKEIDDLAALVYYPEEKLKLIKNDFNSKRELNEWYILTIERLIDLITYCSSKYTRSKLRKALPSEYTYIVEELLYKNNEFNNKKSYYETLLNQVIELEQSDDLIIGLSYTIQRLVVDHLHVVGDIYDRGPEPDKIMDTLIDYHSVDIQWGNHDVLWIGAYAGSKVCLANLLRICARYDNLDIIEDAYGINLRPLLTLAEKHYDGDNPAFKPKKRPDKKVGLSKHEEAQITKIHQAIAMIQFKLEMPIIKRRPSFEMEDRLVLEKINYDTNEITIYGKTYPLKDTCFSTVDPKDPATLLPEEEDVVNKLLLSFQQSEKLKRHMAFLMQKGKLYLPYNGNLLIHGCIPVDDHGEMEAFEIEGVKHKGRDLLDVFERHVRLAFSDKEKTDDLSTDLVWYLWTGKYSSLFGKRAMTTFERYFIEDKASHKEPKNPYYYLREDVDMIRKMLKDFGLNPDEGRIINGHTPVKEIDGEDPIKANGKMLVIDGGFSKAYQSTTGIAGYTLLYNSFGMQLVAHQFFDSKENVLSDGADELSVRRVVDEELQRKKIRDTNVGKDIMEQIRMLKLLMHDRYLK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 78466 80430 . - . GCA_005502385.1_01689_mRNA GCA_005502385.1_01689 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSQSTESELKKKYLDLLSQQFDSPEKLATEIINLESVLELPKGTEHFVSDLHGEYKSFQHVLRNGSGNVRAKINDIFAGNISQKEIDDLAALVYYPEEKLKLIKNDFNSKRELNEWYILTIERLIDLITYCSSKYTRSKLRKALPSEYTYIVEELLYKNNEFNNKKSYYETLLNQVIELEQSDDLIIGLSYTIQRLVVDHLHVVGDIYDRGPEPDKIMDTLIDYHSVDIQWGNHDVLWIGAYAGSKVCLANLLRICARYDNLDIIEDAYGINLRPLLTLAEKHYDGDNPAFKPKKRPDKKVGLSKHEEAQITKIHQAIAMIQFKLEMPIIKRRPSFEMEDRLVLEKINYDTNEITIYGKTYPLKDTCFSTVDPKDPATLLPEEEDVVNKLLLSFQQSEKLKRHMAFLMQKGKLYLPYNGNLLIHGCIPVDDHGEMEAFEIEGVKHKGRDLLDVFERHVRLAFSDKEKTDDLSTDLVWYLWTGKYSSLFGKRAMTTFERYFIEDKASHKEPKNPYYYLREDVDMIRKMLKDFGLNPDEGRIINGHTPVKEIDGEDPIKANGKMLVIDGGFSKAYQSTTGIAGYTLLYNSFGMQLVAHQFFDSKENVLSDGADELSVRRVVDEELQRKKIRDTNVGKDIMEQIRMLKLLMHDRYLK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 78466 80430 . - 0 GCA_005502385.1_01689 GCA_005502385.1_01689_gene,GCA_005502385.1_01689_mRNA GCA_005502385.1_01689 Fructose-1%2C6-bisphosphatase class 3 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSQSTESELKKKYLDLLSQQFDSPEKLATEIINLESVLELPKGTEHFVSDLHGEYKSFQHVLRNGSGNVRAKINDIFAGNISQKEIDDLAALVYYPEEKLKLIKNDFNSKRELNEWYILTIERLIDLITYCSSKYTRSKLRKALPSEYTYIVEELLYKNNEFNNKKSYYETLLNQVIELEQSDDLIIGLSYTIQRLVVDHLHVVGDIYDRGPEPDKIMDTLIDYHSVDIQWGNHDVLWIGAYAGSKVCLANLLRICARYDNLDIIEDAYGINLRPLLTLAEKHYDGDNPAFKPKKRPDKKVGLSKHEEAQITKIHQAIAMIQFKLEMPIIKRRPSFEMEDRLVLEKINYDTNEITIYGKTYPLKDTCFSTVDPKDPATLLPEEEDVVNKLLLSFQQSEKLKRHMAFLMQKGKLYLPYNGNLLIHGCIPVDDHGEMEAFEIEGVKHKGRDLLDVFERHVRLAFSDKEKTDDLSTDLVWYLWTGKYSSLFGKRAMTTFERYFIEDKASHKEPKNPYYYLREDVDMIRKMLKDFGLNPDEGRIINGHTPVKEIDGEDPIKANGKMLVIDGGFSKAYQSTTGIAGYTLLYNSFGMQLVAHQFFDSKENVLSDGADELSVRRVVDEELQRKKIRDTNVGKDIMEQIRMLKLLMHDRYLK persistent 654 fbp Fructose-1,6-bisphosphatase class 3 3.1.3.11 GO:0006094,GO:0042132 COG3855,G WP_017175039.1 UPI0002EA1A1D UniRef100_A0A3S7GVT1,UniRef50_Q2FVB2,UniRef90_Q4L907 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 80576 81187 . - . GCA_005502385.1_01690_gene GCA_005502385.1_01690 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MEQIITNFIGQWGYAAIFILILLENVLTVVPSEIILTFAGLMSVKSGLSILVLFIISTIASFIGLLILYYLCRLIKEESIYRFVDKYGKWFKLKGNDVKRANDWFKRYGAWAVLLCRFIPVLRVLITIPAGINKMNVATFTMLSLLGTTIWNFALILLGRLLSDSFDVLMSGIHTYSYFMYVILIIIILYVLYRLFFKKNNAK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 80576 81187 . - . GCA_005502385.1_01690_mRNA GCA_005502385.1_01690 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MEQIITNFIGQWGYAAIFILILLENVLTVVPSEIILTFAGLMSVKSGLSILVLFIISTIASFIGLLILYYLCRLIKEESIYRFVDKYGKWFKLKGNDVKRANDWFKRYGAWAVLLCRFIPVLRVLITIPAGINKMNVATFTMLSLLGTTIWNFALILLGRLLSDSFDVLMSGIHTYSYFMYVILIIIILYVLYRLFFKKNNAK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 80576 81187 . - 0 GCA_005502385.1_01690 GCA_005502385.1_01690_gene,GCA_005502385.1_01690_mRNA GCA_005502385.1_01690 putative membrane protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MEQIITNFIGQWGYAAIFILILLENVLTVVPSEIILTFAGLMSVKSGLSILVLFIISTIASFIGLLILYYLCRLIKEESIYRFVDKYGKWFKLKGNDVKRANDWFKRYGAWAVLLCRFIPVLRVLITIPAGINKMNVATFTMLSLLGTTIWNFALILLGRLLSDSFDVLMSGIHTYSYFMYVILIIIILYVLYRLFFKKNNAK persistent 203 dedA DedA family protein UniRef50_Q2FVB8,UniRef90_A0A1L8Y593 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 81305 82303 . - . GCA_005502385.1_01691_gene GCA_005502385.1_01691 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MQRYNRQLRYHAFGEDGQTALSNATILILGAGALGSHVAELLARMGAHHLAIVDMDIVELSNLHRQALYTEDDAHHMVPKVHAVKQKIEHINSNVNVQTYYQEIDSTTIEDILKAVNPDIVIDGMDHFKIRYLINEACHKHHIPWVYGAAVGSKGTVYGIDFKGPCLKCLLKQIPTSAESCAINGVLPPVITQVASYEVTEAIRYLSGHGFSHKLITLDAFNIDYKAMNIDVLKDAECDVCGKAHYELLETKQQQKIESLCGKTYLFRYQPTAFDYAEHFPGDIVKSTSFAKLIKDGNYEITLFKDGRMNVYGVEDDNEAEQLYHQYLKALK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 81305 82303 . - . GCA_005502385.1_01691_mRNA GCA_005502385.1_01691 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MQRYNRQLRYHAFGEDGQTALSNATILILGAGALGSHVAELLARMGAHHLAIVDMDIVELSNLHRQALYTEDDAHHMVPKVHAVKQKIEHINSNVNVQTYYQEIDSTTIEDILKAVNPDIVIDGMDHFKIRYLINEACHKHHIPWVYGAAVGSKGTVYGIDFKGPCLKCLLKQIPTSAESCAINGVLPPVITQVASYEVTEAIRYLSGHGFSHKLITLDAFNIDYKAMNIDVLKDAECDVCGKAHYELLETKQQQKIESLCGKTYLFRYQPTAFDYAEHFPGDIVKSTSFAKLIKDGNYEITLFKDGRMNVYGVEDDNEAEQLYHQYLKALK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 81305 82303 . - 0 GCA_005502385.1_01691 GCA_005502385.1_01691_gene,GCA_005502385.1_01691_mRNA GCA_005502385.1_01691 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MQRYNRQLRYHAFGEDGQTALSNATILILGAGALGSHVAELLARMGAHHLAIVDMDIVELSNLHRQALYTEDDAHHMVPKVHAVKQKIEHINSNVNVQTYYQEIDSTTIEDILKAVNPDIVIDGMDHFKIRYLINEACHKHHIPWVYGAAVGSKGTVYGIDFKGPCLKCLLKQIPTSAESCAINGVLPPVITQVASYEVTEAIRYLSGHGFSHKLITLDAFNIDYKAMNIDVLKDAECDVCGKAHYELLETKQQQKIESLCGKTYLFRYQPTAFDYAEHFPGDIVKSTSFAKLIKDGNYEITLFKDGRMNVYGVEDDNEAEQLYHQYLKALK persistent 332 thiF ThiF family adenylyltransferase WP_048681941.1 UPI00065FCE54 UniRef100_UPI00065FCE54,UniRef50_Q5HLB3,UniRef90_A0A3S7GW42 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 82303 83070 . - . GCA_005502385.1_01692_gene GCA_005502385.1_01692 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MFNIGPLEIKSRLLLGTGKFEDEATQTKAIEAAEANVLTFAVRRMNLYDKNLPNPLANINLKDFITFPNTAGAKTAEEAIRIAEIAKHAGVCDMIKVEVIGDDETLLPDPFETYEACKVLLEKGYIVCPYISNDVVLAKRLEELGVHAVMPLASPIGTGRGINNQLNLSYIIKNSNVPVIVDAGIGSPKDACHAMELGADAILLNTAVSGAKDPVKMAEAMKLGIHAGRLSYESGRIPVKYTAQASSPTEGLGFL . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 82303 83070 . - . GCA_005502385.1_01692_mRNA GCA_005502385.1_01692 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MFNIGPLEIKSRLLLGTGKFEDEATQTKAIEAAEANVLTFAVRRMNLYDKNLPNPLANINLKDFITFPNTAGAKTAEEAIRIAEIAKHAGVCDMIKVEVIGDDETLLPDPFETYEACKVLLEKGYIVCPYISNDVVLAKRLEELGVHAVMPLASPIGTGRGINNQLNLSYIIKNSNVPVIVDAGIGSPKDACHAMELGADAILLNTAVSGAKDPVKMAEAMKLGIHAGRLSYESGRIPVKYTAQASSPTEGLGFL . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 82303 83070 . - 0 GCA_005502385.1_01692 GCA_005502385.1_01692_gene,GCA_005502385.1_01692_mRNA GCA_005502385.1_01692 Thiazole synthase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MFNIGPLEIKSRLLLGTGKFEDEATQTKAIEAAEANVLTFAVRRMNLYDKNLPNPLANINLKDFITFPNTAGAKTAEEAIRIAEIAKHAGVCDMIKVEVIGDDETLLPDPFETYEACKVLLEKGYIVCPYISNDVVLAKRLEELGVHAVMPLASPIGTGRGINNQLNLSYIIKNSNVPVIVDAGIGSPKDACHAMELGADAILLNTAVSGAKDPVKMAEAMKLGIHAGRLSYESGRIPVKYTAQASSPTEGLGFL persistent 255 Thiazole synthase 2.8.1.10 WP_019834971.1 UPI00035CFD4A UniRef100_UPI00035CFD4A,UniRef50_Q81UX4,UniRef90_A0A974L006 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 83072 83272 . - . GCA_005502385.1_01693_gene GCA_005502385.1_01693 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKCIINGDTFNFDSEQSITSVLESLELDPKRVIVEHNKTLIKQEDYDQHTVREDDRLELLEFVGGG . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 83072 83272 . - . GCA_005502385.1_01693_mRNA GCA_005502385.1_01693 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKCIINGDTFNFDSEQSITSVLESLELDPKRVIVEHNKTLIKQEDYDQHTVREDDRLELLEFVGGG . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 83072 83272 . - 0 GCA_005502385.1_01693 GCA_005502385.1_01693_gene,GCA_005502385.1_01693_mRNA GCA_005502385.1_01693 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKCIINGDTFNFDSEQSITSVLESLELDPKRVIVEHNKTLIKQEDYDQHTVREDDRLELLEFVGGG persistent 66 thiS sulfur carrier protein ThiS GO:0003824,GO:0009228 WP_017175036.1 UPI0002EBD717 UniRef100_A0A1L8Y5C0,UniRef50_A0A7V7VEV5,UniRef90_A0A974KY37 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 83256 84371 . - . GCA_005502385.1_01694_gene GCA_005502385.1_01694 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MHDVLIIGSGVIGMSIARQLSQSHLDIALIDRDVPGKHASYKAGGMLGAQNEFTEDTDLFRLALESRSLFPQLCQDLEDETGIDIQFQNSGLIKVANRPEDVESLEKQYQFLSGLDSSVIVLSDEELTHLTNGTVTSSEMAIYIPQDGQINANHYTKALFTALKQRQIKRYFNTEVQSVHRQNGYYDVETSQGTLQAKKVIVAAGAWTSKLLNQYSLPRDVVGVKGEVLLIENDHLDLKETVFMTNGCYIVPKYPNRFLIGATSEFDNYSVGNTDDGISWLHHFANERIPELAHGKVIKQWSGVRPYTEGEIPIMDRIDEDLYVISGHYRNGILLSPIIGRDIANWILTGVKPRRYESFSASRRLNHEVYH . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 83256 84371 . - . GCA_005502385.1_01694_mRNA GCA_005502385.1_01694 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MHDVLIIGSGVIGMSIARQLSQSHLDIALIDRDVPGKHASYKAGGMLGAQNEFTEDTDLFRLALESRSLFPQLCQDLEDETGIDIQFQNSGLIKVANRPEDVESLEKQYQFLSGLDSSVIVLSDEELTHLTNGTVTSSEMAIYIPQDGQINANHYTKALFTALKQRQIKRYFNTEVQSVHRQNGYYDVETSQGTLQAKKVIVAAGAWTSKLLNQYSLPRDVVGVKGEVLLIENDHLDLKETVFMTNGCYIVPKYPNRFLIGATSEFDNYSVGNTDDGISWLHHFANERIPELAHGKVIKQWSGVRPYTEGEIPIMDRIDEDLYVISGHYRNGILLSPIIGRDIANWILTGVKPRRYESFSASRRLNHEVYH . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 83256 84371 . - 0 GCA_005502385.1_01694 GCA_005502385.1_01694_gene,GCA_005502385.1_01694_mRNA GCA_005502385.1_01694 Glycine oxidase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MHDVLIIGSGVIGMSIARQLSQSHLDIALIDRDVPGKHASYKAGGMLGAQNEFTEDTDLFRLALESRSLFPQLCQDLEDETGIDIQFQNSGLIKVANRPEDVESLEKQYQFLSGLDSSVIVLSDEELTHLTNGTVTSSEMAIYIPQDGQINANHYTKALFTALKQRQIKRYFNTEVQSVHRQNGYYDVETSQGTLQAKKVIVAAGAWTSKLLNQYSLPRDVVGVKGEVLLIENDHLDLKETVFMTNGCYIVPKYPNRFLIGATSEFDNYSVGNTDDGISWLHHFANERIPELAHGKVIKQWSGVRPYTEGEIPIMDRIDEDLYVISGHYRNGILLSPIIGRDIANWILTGVKPRRYESFSASRRLNHEVYH persistent 371 thiO glycine oxidase ThiO 1.4.3.19 GO:0016647,GO:0050660 WP_048762224.1 UPI0006612A37 UniRef100_UPI0006612A37,UniRef50_A0A7X9WF51,UniRef90_A0A3S7GYW9 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 84364 84954 . - . GCA_005502385.1_01695_gene GCA_005502385.1_01695 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MFIFIAITKYKDLTNDDVQHFLDISDGIDGLLFRTPMSSSDLSSFLKTLIEKGFHKSKIIIHSDVHLLEQLHLSHIHFREMDEDAFSYKSIHPEIEVSMSTHSIESVKAAYEHDLDYVFFGHIFKTPSKPNQLPRSKAEIQRVLEIPIPIYAIGGITEKTIPQLPHGFKGICAISFFMNASLQQIELLRKEWLKDA . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 84364 84954 . - . GCA_005502385.1_01695_mRNA GCA_005502385.1_01695 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MFIFIAITKYKDLTNDDVQHFLDISDGIDGLLFRTPMSSSDLSSFLKTLIEKGFHKSKIIIHSDVHLLEQLHLSHIHFREMDEDAFSYKSIHPEIEVSMSTHSIESVKAAYEHDLDYVFFGHIFKTPSKPNQLPRSKAEIQRVLEIPIPIYAIGGITEKTIPQLPHGFKGICAISFFMNASLQQIELLRKEWLKDA . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 84364 84954 . - 0 GCA_005502385.1_01695 GCA_005502385.1_01695_gene,GCA_005502385.1_01695_mRNA GCA_005502385.1_01695 Thiamine-phosphate synthase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MFIFIAITKYKDLTNDDVQHFLDISDGIDGLLFRTPMSSSDLSSFLKTLIEKGFHKSKIIIHSDVHLLEQLHLSHIHFREMDEDAFSYKSIHPEIEVSMSTHSIESVKAAYEHDLDYVFFGHIFKTPSKPNQLPRSKAEIQRVLEIPIPIYAIGGITEKTIPQLPHGFKGICAISFFMNASLQQIELLRKEWLKDA persistent 196 Thiamine phosphate synthase WP_019834974.1 UPI000374E9F4 UniRef100_UPI000374E9F4,UniRef50_A0A4U9T6L1,UniRef90_A0A3S7GZU4 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 85023 85132 . - . GCA_005502385.1_01696_gene GCA_005502385.1_01696 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 85023 85132 . - . GCA_005502385.1_01696_mRNA GCA_005502385.1_01696 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 . . . . . . . GCA_005502385.1|SCOV01000005.1 Infernal:001001 misc_RNA 85023 85132 78.9 - . GCA_005502385.1_01696 GCA_005502385.1_01696_gene,GCA_005502385.1_01696_mRNA GCA_005502385.1_01696 TPP GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 85480 86760 . + . GCA_005502385.1_01697_gene GCA_005502385.1_01697 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MVQRQKKSKVRWYFAIAFFIIGVIAYMDRSNISFIAPQMMEDLHMTKQQFGLLASFFSLGYALMQVPSGMLAEKFGPRKMISIALLWWSAFTILTGMIKHHGLLYLVRFLFGIGEAPMYPSNAVFNSTWFAKDEKGRASSALLAGSYFGPVLAPVVTIAIVNAFNWQAVFYIFGAVGIVIAALWAIIAKDLPEQHRMVNEAEKQYIMQHRDLVETTKSVAPWNQFFKRMSFYAIAGQYFVVQFVIALFLIWLPTYLTEQYHVQFKDMTISALPWFIMFILILSAGAISDKILHSGQSRFVARGLIAIVGFIVFAISIFFAVHTQNLYVTIFWLSLGLGGMGISMGMSWAAANDIGRNFAGTVSGWMNLWGNIGALISPFLAGALVSSLGWTMTFQLLIIPAVIAAVLWFFVTPDKPLIKDESRHIK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 85480 86760 . + . GCA_005502385.1_01697_mRNA GCA_005502385.1_01697 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MVQRQKKSKVRWYFAIAFFIIGVIAYMDRSNISFIAPQMMEDLHMTKQQFGLLASFFSLGYALMQVPSGMLAEKFGPRKMISIALLWWSAFTILTGMIKHHGLLYLVRFLFGIGEAPMYPSNAVFNSTWFAKDEKGRASSALLAGSYFGPVLAPVVTIAIVNAFNWQAVFYIFGAVGIVIAALWAIIAKDLPEQHRMVNEAEKQYIMQHRDLVETTKSVAPWNQFFKRMSFYAIAGQYFVVQFVIALFLIWLPTYLTEQYHVQFKDMTISALPWFIMFILILSAGAISDKILHSGQSRFVARGLIAIVGFIVFAISIFFAVHTQNLYVTIFWLSLGLGGMGISMGMSWAAANDIGRNFAGTVSGWMNLWGNIGALISPFLAGALVSSLGWTMTFQLLIIPAVIAAVLWFFVTPDKPLIKDESRHIK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 85480 86760 . + 0 GCA_005502385.1_01697 GCA_005502385.1_01697_gene,GCA_005502385.1_01697_mRNA GCA_005502385.1_01697 putative sulfoacetate transporter SauU GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MVQRQKKSKVRWYFAIAFFIIGVIAYMDRSNISFIAPQMMEDLHMTKQQFGLLASFFSLGYALMQVPSGMLAEKFGPRKMISIALLWWSAFTILTGMIKHHGLLYLVRFLFGIGEAPMYPSNAVFNSTWFAKDEKGRASSALLAGSYFGPVLAPVVTIAIVNAFNWQAVFYIFGAVGIVIAALWAIIAKDLPEQHRMVNEAEKQYIMQHRDLVETTKSVAPWNQFFKRMSFYAIAGQYFVVQFVIALFLIWLPTYLTEQYHVQFKDMTISALPWFIMFILILSAGAISDKILHSGQSRFVARGLIAIVGFIVFAISIFFAVHTQNLYVTIFWLSLGLGGMGISMGMSWAAANDIGRNFAGTVSGWMNLWGNIGALISPFLAGALVSSLGWTMTFQLLIIPAVIAAVLWFFVTPDKPLIKDESRHIK persistent 426 MFS transporter WP_017175033.1 UPI00030F7964 UniRef100_A0A4Q9WQA1,UniRef50_Q2FVB9,UniRef90_A0A5B2YY14 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 86938 87222 . + . GCA_005502385.1_01698_gene GCA_005502385.1_01698 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIIINAKLKIKEDVRNDYLDLMNKLVQSSRQEPGNTFYAHYEDVAEHNTFVVVENYKDQEAVQAHNHSDHFKAFSENIGKYVAEEPVIDVAETK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 86938 87222 . + . GCA_005502385.1_01698_mRNA GCA_005502385.1_01698 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIIINAKLKIKEDVRNDYLDLMNKLVQSSRQEPGNTFYAHYEDVAEHNTFVVVENYKDQEAVQAHNHSDHFKAFSENIGKYVAEEPVIDVAETK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 86938 87222 . + 0 GCA_005502385.1_01698 GCA_005502385.1_01698_gene,GCA_005502385.1_01698_mRNA GCA_005502385.1_01698 Putative monooxygenase YcnE GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIIINAKLKIKEDVRNDYLDLMNKLVQSSRQEPGNTFYAHYEDVAEHNTFVVVENYKDQEAVQAHNHSDHFKAFSENIGKYVAEEPVIDVAETK persistent 94 Signal transduction protein TRAP WP_002448351.1 UPI00019FCB61 UniRef100_A0A533IWK1,UniRef50_A0A380FYY9,UniRef90_A0A533IWK1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 87318 89255 . + . GCA_005502385.1_01699_gene GCA_005502385.1_01699 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MGHVIASLIRFDKPKINLWKGIRQGLLMIIPTLIGYLLGHFSFGLLVATGTLAHTYVFKGSAQSMLRTVIICTLSFTICMMLGTLTVNQPVLYGVLLLIVTVIPFYVFNVLKIAGPSSTFFLVTFCLSSNLPDAPEQAPIRGLAIFIGGMLATLVVILTIVFQKQKAEDRAITSDFQTINNLMHHFNDAEKFKDISQDTVTKFKNSEKLLITSTTAMSEKLSSRFEKLLLLHTSAQGIYAELLELNEKNIRPIPQELIEMMDMITRNAYKLSSKREKWTKKVDVDEPFESLMQHILKIDEIAQLQPEQIESEASIRKPLYSKRIVQNLTLDSIIFRNALTYAVIMGAAIFVSLFFNIQRSYWIPLSAHTVLLGLTTIRMLDRSLARGLGTIVGTLLLSAILFFQPHLIVAVILMGLSAMMTEGFVAANYAFAVIFITTQVILLNGLASGNLSIDIAYTRIVDVLIGIVIAVIGVLIINRKNASTMLPTVIAEVVRKEAVIFQYLFSENKYQDTARDRTESLSLSVKMNNMTQVYNSANGELFSSKEAIRYYYPSIFALEEISFMLMRAMQDKQRQRISEKQMGEYLVTFENVAKHFELRGSLNEKELTDLPQYNYLKSALMKLQDNCVATRKDVDHTNHQKTVDA . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 87318 89255 . + . GCA_005502385.1_01699_mRNA GCA_005502385.1_01699 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MGHVIASLIRFDKPKINLWKGIRQGLLMIIPTLIGYLLGHFSFGLLVATGTLAHTYVFKGSAQSMLRTVIICTLSFTICMMLGTLTVNQPVLYGVLLLIVTVIPFYVFNVLKIAGPSSTFFLVTFCLSSNLPDAPEQAPIRGLAIFIGGMLATLVVILTIVFQKQKAEDRAITSDFQTINNLMHHFNDAEKFKDISQDTVTKFKNSEKLLITSTTAMSEKLSSRFEKLLLLHTSAQGIYAELLELNEKNIRPIPQELIEMMDMITRNAYKLSSKREKWTKKVDVDEPFESLMQHILKIDEIAQLQPEQIESEASIRKPLYSKRIVQNLTLDSIIFRNALTYAVIMGAAIFVSLFFNIQRSYWIPLSAHTVLLGLTTIRMLDRSLARGLGTIVGTLLLSAILFFQPHLIVAVILMGLSAMMTEGFVAANYAFAVIFITTQVILLNGLASGNLSIDIAYTRIVDVLIGIVIAVIGVLIINRKNASTMLPTVIAEVVRKEAVIFQYLFSENKYQDTARDRTESLSLSVKMNNMTQVYNSANGELFSSKEAIRYYYPSIFALEEISFMLMRAMQDKQRQRISEKQMGEYLVTFENVAKHFELRGSLNEKELTDLPQYNYLKSALMKLQDNCVATRKDVDHTNHQKTVDA . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 87318 89255 . + 0 GCA_005502385.1_01699 GCA_005502385.1_01699_gene,GCA_005502385.1_01699_mRNA GCA_005502385.1_01699 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MGHVIASLIRFDKPKINLWKGIRQGLLMIIPTLIGYLLGHFSFGLLVATGTLAHTYVFKGSAQSMLRTVIICTLSFTICMMLGTLTVNQPVLYGVLLLIVTVIPFYVFNVLKIAGPSSTFFLVTFCLSSNLPDAPEQAPIRGLAIFIGGMLATLVVILTIVFQKQKAEDRAITSDFQTINNLMHHFNDAEKFKDISQDTVTKFKNSEKLLITSTTAMSEKLSSRFEKLLLLHTSAQGIYAELLELNEKNIRPIPQELIEMMDMITRNAYKLSSKREKWTKKVDVDEPFESLMQHILKIDEIAQLQPEQIESEASIRKPLYSKRIVQNLTLDSIIFRNALTYAVIMGAAIFVSLFFNIQRSYWIPLSAHTVLLGLTTIRMLDRSLARGLGTIVGTLLLSAILFFQPHLIVAVILMGLSAMMTEGFVAANYAFAVIFITTQVILLNGLASGNLSIDIAYTRIVDVLIGIVIAVIGVLIINRKNASTMLPTVIAEVVRKEAVIFQYLFSENKYQDTARDRTESLSLSVKMNNMTQVYNSANGELFSSKEAIRYYYPSIFALEEISFMLMRAMQDKQRQRISEKQMGEYLVTFENVAKHFELRGSLNEKELTDLPQYNYLKSALMKLQDNCVATRKDVDHTNHQKTVDA persistent 645 Integral membrane bound transporter domain-containing protein WP_170999980.1 UPI0007651505 UniRef100_A0A8I0WAH8,UniRef50_A0A853V3T2,UniRef90_A0A974QNU9 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 89328 89741 . + . GCA_005502385.1_01700_gene GCA_005502385.1_01700 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MPWTMNDYPQTWKHLDELERKKAIDIANAMLKDGYKEGDAIPIATKQAEKWYKDASKEELEELKHKHITQHQKDPSARPELNDEDVHVYYEDHEWKVKTEDAKQASDTFSTKKEAKQRAKEIADNRGTQVIEHQKDE . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 89328 89741 . + . GCA_005502385.1_01700_mRNA GCA_005502385.1_01700 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MPWTMNDYPQTWKHLDELERKKAIDIANAMLKDGYKEGDAIPIATKQAEKWYKDASKEELEELKHKHITQHQKDPSARPELNDEDVHVYYEDHEWKVKTEDAKQASDTFSTKKEAKQRAKEIADNRGTQVIEHQKDE . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 89328 89741 . + 0 GCA_005502385.1_01700 GCA_005502385.1_01700_gene,GCA_005502385.1_01700_mRNA GCA_005502385.1_01700 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MPWTMNDYPQTWKHLDELERKKAIDIANAMLKDGYKEGDAIPIATKQAEKWYKDASKEELEELKHKHITQHQKDPSARPELNDEDVHVYYEDHEWKVKTEDAKQASDTFSTKKEAKQRAKEIADNRGTQVIEHQKDE persistent 137 DUF2188 domain-containing protein WP_049434393.1 UPI00066BDA07 UniRef100_UPI00066BDA07,UniRef50_A0A1U7EC79,UniRef90_A0AAE5MYZ9 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 89897 90598 . + . GCA_005502385.1_01701_gene GCA_005502385.1_01701 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MYVERKPSLYIEELRSEFKENINKFKNGDEAFDKLVGFVELDHLYSSALKEISTKLDILDDNFNHIYKHNPIHHMERRVKEMTSLVKKLQRKGLTIDAETAKTNILDIAGIRVVCNYLEDIYVIEKLLLKQEDVKLLKRKDYIEHPKENGYRSLHIVVSIPVFLADRVEATPVEIQIRTIGMDMWASLEHKIRYKNNTNTEDYKDKLKECAVEISDVEAKMQTIHSDIQDKDK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 89897 90598 . + . GCA_005502385.1_01701_mRNA GCA_005502385.1_01701 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MYVERKPSLYIEELRSEFKENINKFKNGDEAFDKLVGFVELDHLYSSALKEISTKLDILDDNFNHIYKHNPIHHMERRVKEMTSLVKKLQRKGLTIDAETAKTNILDIAGIRVVCNYLEDIYVIEKLLLKQEDVKLLKRKDYIEHPKENGYRSLHIVVSIPVFLADRVEATPVEIQIRTIGMDMWASLEHKIRYKNNTNTEDYKDKLKECAVEISDVEAKMQTIHSDIQDKDK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 89897 90598 . + 0 GCA_005502385.1_01701 GCA_005502385.1_01701_gene,GCA_005502385.1_01701_mRNA GCA_005502385.1_01701 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MYVERKPSLYIEELRSEFKENINKFKNGDEAFDKLVGFVELDHLYSSALKEISTKLDILDDNFNHIYKHNPIHHMERRVKEMTSLVKKLQRKGLTIDAETAKTNILDIAGIRVVCNYLEDIYVIEKLLLKQEDVKLLKRKDYIEHPKENGYRSLHIVVSIPVFLADRVEATPVEIQIRTIGMDMWASLEHKIRYKNNTNTEDYKDKLKECAVEISDVEAKMQTIHSDIQDKDK persistent 233 GTP pyrophosphokinase WP_049413692.1 UPI00066BE527 UniRef100_UPI00066BE527,UniRef50_A0A240A5W9,UniRef90_A0A3S7GVT9 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 90722 91597 . + . GCA_005502385.1_01702_gene GCA_005502385.1_01702 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIEQNFKSQRYELKQFKGEHIEVAFAGNKDADKTIVFIHGAMMTYRIMLLFEPYFRDNNLIFVNCPSRGESSNIVREQHTLDDYSERINDVLSQVIETYGIKNLVIIGYSMGGMIGTRLLKFNTLPISHLVYLNSAARITPNQSMLSRLFTSNSKRDHFKDEMIAFKNLPQYILKKSFHNKNNSIRNLFSYIAPIKTIITDIIYSTNADYLPDIEEIEQFPKLLFISGEDDEIIPYTDSQETMKMYKKYGGEVNEVVYSGIGHIDFPAVLDNLPNGTIGIIDHIKQWIQEE . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 90722 91597 . + . GCA_005502385.1_01702_mRNA GCA_005502385.1_01702 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIEQNFKSQRYELKQFKGEHIEVAFAGNKDADKTIVFIHGAMMTYRIMLLFEPYFRDNNLIFVNCPSRGESSNIVREQHTLDDYSERINDVLSQVIETYGIKNLVIIGYSMGGMIGTRLLKFNTLPISHLVYLNSAARITPNQSMLSRLFTSNSKRDHFKDEMIAFKNLPQYILKKSFHNKNNSIRNLFSYIAPIKTIITDIIYSTNADYLPDIEEIEQFPKLLFISGEDDEIIPYTDSQETMKMYKKYGGEVNEVVYSGIGHIDFPAVLDNLPNGTIGIIDHIKQWIQEE . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 90722 91597 . + 0 GCA_005502385.1_01702 GCA_005502385.1_01702_gene,GCA_005502385.1_01702_mRNA GCA_005502385.1_01702 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MIEQNFKSQRYELKQFKGEHIEVAFAGNKDADKTIVFIHGAMMTYRIMLLFEPYFRDNNLIFVNCPSRGESSNIVREQHTLDDYSERINDVLSQVIETYGIKNLVIIGYSMGGMIGTRLLKFNTLPISHLVYLNSAARITPNQSMLSRLFTSNSKRDHFKDEMIAFKNLPQYILKKSFHNKNNSIRNLFSYIAPIKTIITDIIYSTNADYLPDIEEIEQFPKLLFISGEDDEIIPYTDSQETMKMYKKYGGEVNEVVYSGIGHIDFPAVLDNLPNGTIGIIDHIKQWIQEE persistent 291 Esterase WP_048680193.1 UPI000660DA9B UniRef100_UPI000660DA9B,UniRef50_A0A4Z1BIG3,UniRef90_A0AAE5MZA8 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 91691 92401 . + . GCA_005502385.1_01703_gene GCA_005502385.1_01703 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSHYTIGELAKQSKVTIRTLQYYDRRGLLIAHRQTDSNRRYYTDEHVKQLELILVLKQLGCTLDEIKTLLDEDTNMNTFKTLLSLRKDALHSKVEMYSHTLNQIEKVETYISEQSSAPINHLTDIDDAMKQEYKITYFRKKIWISVGILGIIQYSGLLLSLLRRSIKPLIVILPILITYAIVLTAIYLKKVLYLCPNCHHTFKPTLGAFVKAKHTPKTRQLTCPNCHQTHYCIEVY . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 91691 92401 . + . GCA_005502385.1_01703_mRNA GCA_005502385.1_01703 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSHYTIGELAKQSKVTIRTLQYYDRRGLLIAHRQTDSNRRYYTDEHVKQLELILVLKQLGCTLDEIKTLLDEDTNMNTFKTLLSLRKDALHSKVEMYSHTLNQIEKVETYISEQSSAPINHLTDIDDAMKQEYKITYFRKKIWISVGILGIIQYSGLLLSLLRRSIKPLIVILPILITYAIVLTAIYLKKVLYLCPNCHHTFKPTLGAFVKAKHTPKTRQLTCPNCHQTHYCIEVY . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 91691 92401 . + 0 GCA_005502385.1_01703 GCA_005502385.1_01703_gene,GCA_005502385.1_01703_mRNA GCA_005502385.1_01703 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSHYTIGELAKQSKVTIRTLQYYDRRGLLIAHRQTDSNRRYYTDEHVKQLELILVLKQLGCTLDEIKTLLDEDTNMNTFKTLLSLRKDALHSKVEMYSHTLNQIEKVETYISEQSSAPINHLTDIDDAMKQEYKITYFRKKIWISVGILGIIQYSGLLLSLLRRSIKPLIVILPILITYAIVLTAIYLKKVLYLCPNCHHTFKPTLGAFVKAKHTPKTRQLTCPNCHQTHYCIEVY persistent 236 merR MerR family transcriptional regulator UniRef50_Q4L8Z4,UniRef90_A0A3S7GW50 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 92531 93211 . + . GCA_005502385.1_01704_gene GCA_005502385.1_01704 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MEQHYPKQWKNRMTTGESIAAELRFQIVNSTLEPDTLLTENQVAKQFDVSRSPVRDAFKLLQTNQLIHLERMGARVLEFGEQEKKELYDLRLMLESFAFSKLKYIDRKKVIKEMKKHLEMMKVAVQFEDAESFTQHDLQFHEALIHASQHHYLQTFWNHLKPIVEVLVLCSMRERMRTNKEDFDRIHRNHSIFIEAVERYDTDTLREAFHLNFDDVGKDIESFWLQ . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 92531 93211 . + . GCA_005502385.1_01704_mRNA GCA_005502385.1_01704 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MEQHYPKQWKNRMTTGESIAAELRFQIVNSTLEPDTLLTENQVAKQFDVSRSPVRDAFKLLQTNQLIHLERMGARVLEFGEQEKKELYDLRLMLESFAFSKLKYIDRKKVIKEMKKHLEMMKVAVQFEDAESFTQHDLQFHEALIHASQHHYLQTFWNHLKPIVEVLVLCSMRERMRTNKEDFDRIHRNHSIFIEAVERYDTDTLREAFHLNFDDVGKDIESFWLQ . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 92531 93211 . + 0 GCA_005502385.1_01704 GCA_005502385.1_01704_gene,GCA_005502385.1_01704_mRNA GCA_005502385.1_01704 putative D-xylose utilization operon transcriptional repressor GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MEQHYPKQWKNRMTTGESIAAELRFQIVNSTLEPDTLLTENQVAKQFDVSRSPVRDAFKLLQTNQLIHLERMGARVLEFGEQEKKELYDLRLMLESFAFSKLKYIDRKKVIKEMKKHLEMMKVAVQFEDAESFTQHDLQFHEALIHASQHHYLQTFWNHLKPIVEVLVLCSMRERMRTNKEDFDRIHRNHSIFIEAVERYDTDTLREAFHLNFDDVGKDIESFWLQ persistent 226 gntR GntR family transcriptional regulator WP_017175027.1 UPI0002D9B744 UniRef100_A0A3S7GWG3,UniRef50_Q5HLC8,UniRef90_A0A3S7GWG3 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 93234 94772 . + . GCA_005502385.1_01705_gene GCA_005502385.1_01705 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKYMIGVDIGTTSTKSVLYDEQGQFITKHNIGYPLHTPNVDVSEENPDELFDAVLMTVKHVIRESGVHKEDIKLISFSAQMHSLIALDSQHERLTESMIWADNRANQYADLINEQYEGHDIYKRTGTPIHPMSPLSKIFWMKHEQPDIYQNTAMFADIKTYIFYQLYGKYVIDHSMASATGMFNLQQLDWDQEALELLGISASQLPQLVSTTHILKGMKKRYATLMGIDENTPVVVGASDGVLSNLGVNSYKKGEVAVTIGTSGAIRTVIDKPRTDYKGRIFCYVLDEDHYVIGGPVNNGGVILRWLRDELLASEVETAKRLGVDPYDVLTKIASRVKPGADGLIFHPYLAGERAPLWNANARGSFFGLTLSHQKEHMIRAALEGVLYNLYTVYLALIEVMNETPNTIKATGGFAKSEVWRQMMADIFDTDVIVPESYESSCLGACVLGLKALGDIEDYSIIENMVGTTYAHQPNQDTVNMYQQLVTIFINLSRTLEDRYEEIADFQRKHMN . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 93234 94772 . + . GCA_005502385.1_01705_mRNA GCA_005502385.1_01705 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKYMIGVDIGTTSTKSVLYDEQGQFITKHNIGYPLHTPNVDVSEENPDELFDAVLMTVKHVIRESGVHKEDIKLISFSAQMHSLIALDSQHERLTESMIWADNRANQYADLINEQYEGHDIYKRTGTPIHPMSPLSKIFWMKHEQPDIYQNTAMFADIKTYIFYQLYGKYVIDHSMASATGMFNLQQLDWDQEALELLGISASQLPQLVSTTHILKGMKKRYATLMGIDENTPVVVGASDGVLSNLGVNSYKKGEVAVTIGTSGAIRTVIDKPRTDYKGRIFCYVLDEDHYVIGGPVNNGGVILRWLRDELLASEVETAKRLGVDPYDVLTKIASRVKPGADGLIFHPYLAGERAPLWNANARGSFFGLTLSHQKEHMIRAALEGVLYNLYTVYLALIEVMNETPNTIKATGGFAKSEVWRQMMADIFDTDVIVPESYESSCLGACVLGLKALGDIEDYSIIENMVGTTYAHQPNQDTVNMYQQLVTIFINLSRTLEDRYEEIADFQRKHMN . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 93234 94772 . + 0 GCA_005502385.1_01705 GCA_005502385.1_01705_gene,GCA_005502385.1_01705_mRNA GCA_005502385.1_01705 Xylulose kinase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKYMIGVDIGTTSTKSVLYDEQGQFITKHNIGYPLHTPNVDVSEENPDELFDAVLMTVKHVIRESGVHKEDIKLISFSAQMHSLIALDSQHERLTESMIWADNRANQYADLINEQYEGHDIYKRTGTPIHPMSPLSKIFWMKHEQPDIYQNTAMFADIKTYIFYQLYGKYVIDHSMASATGMFNLQQLDWDQEALELLGISASQLPQLVSTTHILKGMKKRYATLMGIDENTPVVVGASDGVLSNLGVNSYKKGEVAVTIGTSGAIRTVIDKPRTDYKGRIFCYVLDEDHYVIGGPVNNGGVILRWLRDELLASEVETAKRLGVDPYDVLTKIASRVKPGADGLIFHPYLAGERAPLWNANARGSFFGLTLSHQKEHMIRAALEGVLYNLYTVYLALIEVMNETPNTIKATGGFAKSEVWRQMMADIFDTDVIVPESYESSCLGACVLGLKALGDIEDYSIIENMVGTTYAHQPNQDTVNMYQQLVTIFINLSRTLEDRYEEIADFQRKHMN persistent 512 gntK gluconokinase 2.7.1.12 GO:0009255,GO:0019521,GO:0046316 WP_049434386.1 UPI00066E5A67 UniRef100_UPI00066E5A67,UniRef50_A0A1X1FDN6,UniRef90_A0A3S7GW91 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 94816 96171 . + . GCA_005502385.1_01706_gene GCA_005502385.1_01706 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MGTIWTLASVVIGIVLLLTLIIFLKLNTFISLIITSIVTAILLGMPLNKVMETIEAGMGGTLGHIALIFGLGAILGKLLADGGGANRIADTLIDKFGQKHVQWAMLIAAFIVGIALFFEVGLVLLIPLVFTIAKRAKVSPLKLGLPMVTALSVTHGFLPPHPGPVVIAKELKANIGHVLLYGIIIAIPVTLIAGPIFNKFAQKLIPSAYTREGDISALGSQKEFKASEMPSFGLSILTAVLPVILMLLSTVVQLVTGHETAKNLFEQIIYFIGTAGTAMLISVIFAIFSMGLHRGRKMDDIMKSVTNAIYPIGMMILIIGGGGTFKQVLIDGGVGDTIAKLFEGSTMSPILLAWIVAAVLRIALGSATVAAISTTGIILPLLQHSDANVALVVLAIGAGSVILSHVNDAGFWMFKEYFGLTVKETFLTWSLLETIISVSGIIFILFISLFV . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 94816 96171 . + . GCA_005502385.1_01706_mRNA GCA_005502385.1_01706 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MGTIWTLASVVIGIVLLLTLIIFLKLNTFISLIITSIVTAILLGMPLNKVMETIEAGMGGTLGHIALIFGLGAILGKLLADGGGANRIADTLIDKFGQKHVQWAMLIAAFIVGIALFFEVGLVLLIPLVFTIAKRAKVSPLKLGLPMVTALSVTHGFLPPHPGPVVIAKELKANIGHVLLYGIIIAIPVTLIAGPIFNKFAQKLIPSAYTREGDISALGSQKEFKASEMPSFGLSILTAVLPVILMLLSTVVQLVTGHETAKNLFEQIIYFIGTAGTAMLISVIFAIFSMGLHRGRKMDDIMKSVTNAIYPIGMMILIIGGGGTFKQVLIDGGVGDTIAKLFEGSTMSPILLAWIVAAVLRIALGSATVAAISTTGIILPLLQHSDANVALVVLAIGAGSVILSHVNDAGFWMFKEYFGLTVKETFLTWSLLETIISVSGIIFILFISLFV . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 94816 96171 . + 0 GCA_005502385.1_01706 GCA_005502385.1_01706_gene,GCA_005502385.1_01706_mRNA GCA_005502385.1_01706 High-affinity gluconate transporter GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MGTIWTLASVVIGIVLLLTLIIFLKLNTFISLIITSIVTAILLGMPLNKVMETIEAGMGGTLGHIALIFGLGAILGKLLADGGGANRIADTLIDKFGQKHVQWAMLIAAFIVGIALFFEVGLVLLIPLVFTIAKRAKVSPLKLGLPMVTALSVTHGFLPPHPGPVVIAKELKANIGHVLLYGIIIAIPVTLIAGPIFNKFAQKLIPSAYTREGDISALGSQKEFKASEMPSFGLSILTAVLPVILMLLSTVVQLVTGHETAKNLFEQIIYFIGTAGTAMLISVIFAIFSMGLHRGRKMDDIMKSVTNAIYPIGMMILIIGGGGTFKQVLIDGGVGDTIAKLFEGSTMSPILLAWIVAAVLRIALGSATVAAISTTGIILPLLQHSDANVALVVLAIGAGSVILSHVNDAGFWMFKEYFGLTVKETFLTWSLLETIISVSGIIFILFISLFV persistent 451 gntT Gluconate permease COG2610,G WP_137689631.1 UPI0010F88632 UniRef100_UPI0010F88632,UniRef50_O31862,UniRef90_Q4L8Z0 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 96329 97195 . + . GCA_005502385.1_01707_gene GCA_005502385.1_01707 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKQIKKAIIPAAGLGTRFLPATKAMPKEMLPILDKPTIQYIVEEAARAGIEDIIIVTGKHKRAIEDHFDNQKELEMVLEEKGKTDLLEKVHYSTDLANIFYVRQKEQKGLGHAIYTARQFIGNEPFAVLLGDDIVESEEPAIKQLMNVYEETGHSVIGVQEVPGNVTHRYGIIDPLEKQGRRYEVKQFVEKPEQGTAPSNLAIMGRYILTPEIFDYLKTQKEGAGNEIQLTDAIERMNSAVPVYAYDFDGDRYDVGEKLGFVKTTIEYALKDPKMKDELVTFIKHLGL . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 96329 97195 . + . GCA_005502385.1_01707_mRNA GCA_005502385.1_01707 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKQIKKAIIPAAGLGTRFLPATKAMPKEMLPILDKPTIQYIVEEAARAGIEDIIIVTGKHKRAIEDHFDNQKELEMVLEEKGKTDLLEKVHYSTDLANIFYVRQKEQKGLGHAIYTARQFIGNEPFAVLLGDDIVESEEPAIKQLMNVYEETGHSVIGVQEVPGNVTHRYGIIDPLEKQGRRYEVKQFVEKPEQGTAPSNLAIMGRYILTPEIFDYLKTQKEGAGNEIQLTDAIERMNSAVPVYAYDFDGDRYDVGEKLGFVKTTIEYALKDPKMKDELVTFIKHLGL . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 96329 97195 . + 0 GCA_005502385.1_01707 GCA_005502385.1_01707_gene,GCA_005502385.1_01707_mRNA GCA_005502385.1_01707 UTP--glucose-1-phosphate uridylyltransferase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKQIKKAIIPAAGLGTRFLPATKAMPKEMLPILDKPTIQYIVEEAARAGIEDIIIVTGKHKRAIEDHFDNQKELEMVLEEKGKTDLLEKVHYSTDLANIFYVRQKEQKGLGHAIYTARQFIGNEPFAVLLGDDIVESEEPAIKQLMNVYEETGHSVIGVQEVPGNVTHRYGIIDPLEKQGRRYEVKQFVEKPEQGTAPSNLAIMGRYILTPEIFDYLKTQKEGAGNEIQLTDAIERMNSAVPVYAYDFDGDRYDVGEKLGFVKTTIEYALKDPKMKDELVTFIKHLGL persistent 288 galU UTP--glucose-1-phosphate uridylyltransferase GalU 2.7.7.9 GO:0003983,GO:0006011,GO:0009246 COG1210,M WP_049413706.1 UPI00066C5AC2 UniRef100_UPI00066C5AC2,UniRef50_Q2G1T6,UniRef90_Q4L8Y7 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 97638 98033 . + . GCA_005502385.1_01708_gene GCA_005502385.1_01708 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKNINVVGAVIYSENKILCAQRNENMSLPLKWEFPGGKIEKGETEEEALIREINEEMKCDLTVENKIIAAEYEYDFGIVNLTTYKCTLNNEMPTLTEHKEIKWLEPDELAKLDWAPADIPTVEIIVKGKN . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 97638 98033 . + . GCA_005502385.1_01708_mRNA GCA_005502385.1_01708 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKNINVVGAVIYSENKILCAQRNENMSLPLKWEFPGGKIEKGETEEEALIREINEEMKCDLTVENKIIAAEYEYDFGIVNLTTYKCTLNNEMPTLTEHKEIKWLEPDELAKLDWAPADIPTVEIIVKGKN . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 97638 98033 . + 0 GCA_005502385.1_01708 GCA_005502385.1_01708_gene,GCA_005502385.1_01708_mRNA GCA_005502385.1_01708 CTP pyrophosphohydrolase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKNINVVGAVIYSENKILCAQRNENMSLPLKWEFPGGKIEKGETEEEALIREINEEMKCDLTVENKIIAAEYEYDFGIVNLTTYKCTLNNEMPTLTEHKEIKWLEPDELAKLDWAPADIPTVEIIVKGKN shell 131 8-oxo-dGTP diphosphatase WP_048762213.1 UPI00066035F2 UniRef100_UPI00066035F2,UniRef50_A0A9X0XK58,UniRef90_A0AAE5JM17 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 98033 100864 . + . GCA_005502385.1_01709_gene GCA_005502385.1_01709 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MEDKLILNLNQSLKKGFIDKNLTNESNLTPKLLVNNKNQNVLTSIINELEKCYSFFISVAFITESGLASLKAIFNDLNHKGIKGKLITSNYLGFNTPKMYRELLKLENIEVRLTDVEGFHAKGYIFDHEDYSSMIIGSSNLTSTAMKINYEHNILLSTHKNGELIYNLKNQFEVLWENSINLNSQWVNDYEETFESKLYKDFLKINREQNHLVNRFKKSNEIQPNIMQEEALMSLKKLRNSGEKKGLVISATGTGKTILCALDVRNYNPQKFLFIVHNEGILKKAMKEFKKVFPFNQETDFGFYTGKYKDIESKYLFATIQTLSNNNNYEIFDKKEFDYIVFDEAHRTDASTYQIIMNYFRPNFMLGMTATPERTDEGNIFELFDNNVAYEIRLPKALESDILCPFHYFGVTDYIHNGVTSDDYTELKDLTSDERIKHIIEKTNYYGYSGSQLKGLIFVSRKEEAIEIAEKLSLNNIPSKALIGSDTQNKRTKVINELINGKINYIVTVNLFNEGIDIPEVNQIVMLRSTQSSIIFTQQLGRGLRKSSEKEFVTIIDFIGNYENNYLIPIALSDNQSHNKDDYRKFLTEPNKLSGVSTINFEEIAKKKIFKSIDHANLNSTKIIKEAFENVKERIGRRPMLMDFITQNSIDPKVIISKFNNYYLFLKKYNYIGEIFRKDAVKNLTFLSKELLPGLKKSDYEVLENMIKGNDYSLKSEDDMKTSLNILSLNYFGKNEKERYGSPIVDPNTKRLSKTFSEYLKDEDYRSFVFDILNLAKYYNEKIQNSGNDLILYNQYTRLDFLKLVNWRNDKKNMANNIYGYRVLDGYIPLFITYHKSEDIDDSIKYEDHFLNQEELAWVSRKNVSLKNKEINQIINHKEDGKTIYIFVKKNDSEGSQHYYLGEAEYMKGSANETTNVTEDKIVTMNFIMKTPIRDDIYRYLVN . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 98033 100864 . + . GCA_005502385.1_01709_mRNA GCA_005502385.1_01709 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MEDKLILNLNQSLKKGFIDKNLTNESNLTPKLLVNNKNQNVLTSIINELEKCYSFFISVAFITESGLASLKAIFNDLNHKGIKGKLITSNYLGFNTPKMYRELLKLENIEVRLTDVEGFHAKGYIFDHEDYSSMIIGSSNLTSTAMKINYEHNILLSTHKNGELIYNLKNQFEVLWENSINLNSQWVNDYEETFESKLYKDFLKINREQNHLVNRFKKSNEIQPNIMQEEALMSLKKLRNSGEKKGLVISATGTGKTILCALDVRNYNPQKFLFIVHNEGILKKAMKEFKKVFPFNQETDFGFYTGKYKDIESKYLFATIQTLSNNNNYEIFDKKEFDYIVFDEAHRTDASTYQIIMNYFRPNFMLGMTATPERTDEGNIFELFDNNVAYEIRLPKALESDILCPFHYFGVTDYIHNGVTSDDYTELKDLTSDERIKHIIEKTNYYGYSGSQLKGLIFVSRKEEAIEIAEKLSLNNIPSKALIGSDTQNKRTKVINELINGKINYIVTVNLFNEGIDIPEVNQIVMLRSTQSSIIFTQQLGRGLRKSSEKEFVTIIDFIGNYENNYLIPIALSDNQSHNKDDYRKFLTEPNKLSGVSTINFEEIAKKKIFKSIDHANLNSTKIIKEAFENVKERIGRRPMLMDFITQNSIDPKVIISKFNNYYLFLKKYNYIGEIFRKDAVKNLTFLSKELLPGLKKSDYEVLENMIKGNDYSLKSEDDMKTSLNILSLNYFGKNEKERYGSPIVDPNTKRLSKTFSEYLKDEDYRSFVFDILNLAKYYNEKIQNSGNDLILYNQYTRLDFLKLVNWRNDKKNMANNIYGYRVLDGYIPLFITYHKSEDIDDSIKYEDHFLNQEELAWVSRKNVSLKNKEINQIINHKEDGKTIYIFVKKNDSEGSQHYYLGEAEYMKGSANETTNVTEDKIVTMNFIMKTPIRDDIYRYLVN . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 98033 100864 . + 0 GCA_005502385.1_01709 GCA_005502385.1_01709_gene,GCA_005502385.1_01709_mRNA GCA_005502385.1_01709 UvrABC system protein B GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MEDKLILNLNQSLKKGFIDKNLTNESNLTPKLLVNNKNQNVLTSIINELEKCYSFFISVAFITESGLASLKAIFNDLNHKGIKGKLITSNYLGFNTPKMYRELLKLENIEVRLTDVEGFHAKGYIFDHEDYSSMIIGSSNLTSTAMKINYEHNILLSTHKNGELIYNLKNQFEVLWENSINLNSQWVNDYEETFESKLYKDFLKINREQNHLVNRFKKSNEIQPNIMQEEALMSLKKLRNSGEKKGLVISATGTGKTILCALDVRNYNPQKFLFIVHNEGILKKAMKEFKKVFPFNQETDFGFYTGKYKDIESKYLFATIQTLSNNNNYEIFDKKEFDYIVFDEAHRTDASTYQIIMNYFRPNFMLGMTATPERTDEGNIFELFDNNVAYEIRLPKALESDILCPFHYFGVTDYIHNGVTSDDYTELKDLTSDERIKHIIEKTNYYGYSGSQLKGLIFVSRKEEAIEIAEKLSLNNIPSKALIGSDTQNKRTKVINELINGKINYIVTVNLFNEGIDIPEVNQIVMLRSTQSSIIFTQQLGRGLRKSSEKEFVTIIDFIGNYENNYLIPIALSDNQSHNKDDYRKFLTEPNKLSGVSTINFEEIAKKKIFKSIDHANLNSTKIIKEAFENVKERIGRRPMLMDFITQNSIDPKVIISKFNNYYLFLKKYNYIGEIFRKDAVKNLTFLSKELLPGLKKSDYEVLENMIKGNDYSLKSEDDMKTSLNILSLNYFGKNEKERYGSPIVDPNTKRLSKTFSEYLKDEDYRSFVFDILNLAKYYNEKIQNSGNDLILYNQYTRLDFLKLVNWRNDKKNMANNIYGYRVLDGYIPLFITYHKSEDIDDSIKYEDHFLNQEELAWVSRKNVSLKNKEINQIINHKEDGKTIYIFVKKNDSEGSQHYYLGEAEYMKGSANETTNVTEDKIVTMNFIMKTPIRDDIYRYLVN shell 943 DUF3427 domain-containing protein WP_048762211.1 UPI0006611F89 UniRef100_UPI0006611F89,UniRef50_A0A380HJB7,UniRef90_A0A974KY33 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 101199 101390 . + . GCA_005502385.1_01710_gene GCA_005502385.1_01710 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MRKVIEGVIFSEEGSYDIYLKTGVNQGLISDIKDGYMTIDSMSYLDAERLYFYGLERKTLVTN . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 101199 101390 . + . GCA_005502385.1_01710_mRNA GCA_005502385.1_01710 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MRKVIEGVIFSEEGSYDIYLKTGVNQGLISDIKDGYMTIDSMSYLDAERLYFYGLERKTLVTN . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 101199 101390 . + 0 GCA_005502385.1_01710 GCA_005502385.1_01710_gene,GCA_005502385.1_01710_mRNA GCA_005502385.1_01710 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MRKVIEGVIFSEEGSYDIYLKTGVNQGLISDIKDGYMTIDSMSYLDAERLYFYGLERKTLVTN persistent 63 HTH cro/C1-type domain-containing protein WP_002448449.1 UPI00019FCC3C UniRef100_A0A1L8Y5D8,UniRef50_S2YA76,UniRef90_A0A1L8Y5D8 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 101546 101827 . - . GCA_005502385.1_01711_gene GCA_005502385.1_01711 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSVIAKDFSPLVQALRQKVGRTSFSFRFEDLFTKEEWLNMSVKERTRQEREFIARMDHIPNIRMPFSSEDGYKFKLYNQEYQYNEVKNNFKSL . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 101546 101827 . - . GCA_005502385.1_01711_mRNA GCA_005502385.1_01711 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSVIAKDFSPLVQALRQKVGRTSFSFRFEDLFTKEEWLNMSVKERTRQEREFIARMDHIPNIRMPFSSEDGYKFKLYNQEYQYNEVKNNFKSL . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 101546 101827 . - 0 GCA_005502385.1_01711 GCA_005502385.1_01711_gene,GCA_005502385.1_01711_mRNA GCA_005502385.1_01711 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSVIAKDFSPLVQALRQKVGRTSFSFRFEDLFTKEEWLNMSVKERTRQEREFIARMDHIPNIRMPFSSEDGYKFKLYNQEYQYNEVKNNFKSL persistent 93 DUF1413 domain-containing protein WP_049382416.1 UPI00066BF5B0 UniRef100_UPI00066BF5B0,UniRef50_Q4L8Y2,UniRef90_A0A974QNE1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 101984 102679 . + . GCA_005502385.1_01712_gene GCA_005502385.1_01712 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAKLTDKVAIITGASSGIGEATAKRLAEEGAKVVLAGRNDEKLQRVAEHLNEGDYLITPTNVMYRDDVDALVENAIAKFGKVDIFVNCAGINLSSKITDYKVDDWDKMVDTNIKGLLYGLNAVLPHFEEQSSGHIINMASISGFEVNKTSALYSATKSAVLRIVEALEKELARTGIKSTSILPGMVDTPMTEGYDFGDRKKLDPENIADAVIYAVTQPAHVNVNEVVVRPI . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 101984 102679 . + . GCA_005502385.1_01712_mRNA GCA_005502385.1_01712 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAKLTDKVAIITGASSGIGEATAKRLAEEGAKVVLAGRNDEKLQRVAEHLNEGDYLITPTNVMYRDDVDALVENAIAKFGKVDIFVNCAGINLSSKITDYKVDDWDKMVDTNIKGLLYGLNAVLPHFEEQSSGHIINMASISGFEVNKTSALYSATKSAVLRIVEALEKELARTGIKSTSILPGMVDTPMTEGYDFGDRKKLDPENIADAVIYAVTQPAHVNVNEVVVRPI . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 101984 102679 . + 0 GCA_005502385.1_01712 GCA_005502385.1_01712_gene,GCA_005502385.1_01712_mRNA GCA_005502385.1_01712 putative oxidoreductase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAKLTDKVAIITGASSGIGEATAKRLAEEGAKVVLAGRNDEKLQRVAEHLNEGDYLITPTNVMYRDDVDALVENAIAKFGKVDIFVNCAGINLSSKITDYKVDDWDKMVDTNIKGLLYGLNAVLPHFEEQSSGHIINMASISGFEVNKTSALYSATKSAVLRIVEALEKELARTGIKSTSILPGMVDTPMTEGYDFGDRKKLDPENIADAVIYAVTQPAHVNVNEVVVRPI persistent 231 Oxidoreductase UniRef50_Q2FVD5,UniRef90_A0A3S7GVP8 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 102805 104037 . + . GCA_005502385.1_01713_gene GCA_005502385.1_01713 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MEQRLFELLDGLVKYNTESPPGRNTDPLQDDIEQLLKTLNFDIQREHLYENDSVIVATLKGEDEDAPKLILNGHVDVANVDDDSNWHYPPFQLTEKEGWLYGRGVSDMKGGMASLFYVLEKLHQEGRRPKGDIVVQSVVGEEVGEAGTKRACEIGPQADLALVLDTSENMALGQGGVITGWITVKSKNTIHDGARSQTIHAGGGLFGASAIEKMTKIIQALNELEQHWAVMKHSPGMPPGANTINPAVIEGGRHPAFIADECRLWITVHYLPNESYDDVTKEIEAYLNRVADADIWLRENPLQFEWGGESMIEDKGEIFPSFTIPLEHPGFKQLQDAHYHVHHSEMKHGMSTTVTDGGWTAHFDIPTILYGPGSLEEAHSVDEKIEAQELQTYSDVLYTFLKHWYEHPEK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 102805 104037 . + . GCA_005502385.1_01713_mRNA GCA_005502385.1_01713 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MEQRLFELLDGLVKYNTESPPGRNTDPLQDDIEQLLKTLNFDIQREHLYENDSVIVATLKGEDEDAPKLILNGHVDVANVDDDSNWHYPPFQLTEKEGWLYGRGVSDMKGGMASLFYVLEKLHQEGRRPKGDIVVQSVVGEEVGEAGTKRACEIGPQADLALVLDTSENMALGQGGVITGWITVKSKNTIHDGARSQTIHAGGGLFGASAIEKMTKIIQALNELEQHWAVMKHSPGMPPGANTINPAVIEGGRHPAFIADECRLWITVHYLPNESYDDVTKEIEAYLNRVADADIWLRENPLQFEWGGESMIEDKGEIFPSFTIPLEHPGFKQLQDAHYHVHHSEMKHGMSTTVTDGGWTAHFDIPTILYGPGSLEEAHSVDEKIEAQELQTYSDVLYTFLKHWYEHPEK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 102805 104037 . + 0 GCA_005502385.1_01713 GCA_005502385.1_01713_gene,GCA_005502385.1_01713_mRNA GCA_005502385.1_01713 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MEQRLFELLDGLVKYNTESPPGRNTDPLQDDIEQLLKTLNFDIQREHLYENDSVIVATLKGEDEDAPKLILNGHVDVANVDDDSNWHYPPFQLTEKEGWLYGRGVSDMKGGMASLFYVLEKLHQEGRRPKGDIVVQSVVGEEVGEAGTKRACEIGPQADLALVLDTSENMALGQGGVITGWITVKSKNTIHDGARSQTIHAGGGLFGASAIEKMTKIIQALNELEQHWAVMKHSPGMPPGANTINPAVIEGGRHPAFIADECRLWITVHYLPNESYDDVTKEIEAYLNRVADADIWLRENPLQFEWGGESMIEDKGEIFPSFTIPLEHPGFKQLQDAHYHVHHSEMKHGMSTTVTDGGWTAHFDIPTILYGPGSLEEAHSVDEKIEAQELQTYSDVLYTFLKHWYEHPEK persistent 410 acetylornithine deacetylase 3.5.1.-,3.5.1.16 GO:0016787 WP_017175013.1 UPI00030E138B UniRef100_A0A3S7GVW3,UniRef50_A0A380FXJ0,UniRef90_A0A380FXJ0 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 104094 106259 . - . GCA_005502385.1_01714_gene GCA_005502385.1_01714 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MQTQLGDYDISLPKYYNNRELSWLDFNYRVLQEAYDNNNPLLEKLNFVSIFSSNLDEFFMVRVAGLKDQVKMGFDKPENKTQMTPQEQVDAIQEKAKKYVNMQYERYNELIEELRNYDIVMCKPENLSDSILSKLERDFKLTILPTLTPLGIDAYHPFPKLNNKSLNIFVDIDTDDAINSAIVQIPSLIPRFLTYNEGSKQYVVMVEDVITHFINHLFTGYEVLNTFIFRITRNADLTIHEDGAEDLLIEIERFLKERKSGSAVRLEVDNRTASIEDLGWLTDTLEVDEQDVYLLNGPLDLTFIFGLVDHLSHKLKYLTYDKYTPQIPRSLGNNNVYDLALKRDVFFHHPYESFEPIVDFIREAAEDPNTIAIKQTLYRVSKDSPIIKSLKEAAENGKQVTVLVELKARFDEENNVHWARMLEDAGCHVIYGMTHLKTHSKIALVVKRIGGELTSFVHLGTGNYNDKTAKLYTDMGVITTDKLIAEDAINFFNYLSGYSVKPEYNKLIVAPFDIRDVFIDRIDKEIASHRQHGNGKIMMKMNSLTDKAIIEKLFEASQAGVKIQLIIRGICCLKPGIPGVSENIEVVSIVGRLLEHSRIYYFYNNGDERIYLSSADVMTRNMIKRVEILFPVEDKEIGKRLVDFMNLQLSDNQKGRYQDQYGDYHYVQNDLSPLNSQAYLMKEAVKYGKKLKKETTQPSGMPVVSKRRASWVNRLRKTLKK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 104094 106259 . - . GCA_005502385.1_01714_mRNA GCA_005502385.1_01714 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MQTQLGDYDISLPKYYNNRELSWLDFNYRVLQEAYDNNNPLLEKLNFVSIFSSNLDEFFMVRVAGLKDQVKMGFDKPENKTQMTPQEQVDAIQEKAKKYVNMQYERYNELIEELRNYDIVMCKPENLSDSILSKLERDFKLTILPTLTPLGIDAYHPFPKLNNKSLNIFVDIDTDDAINSAIVQIPSLIPRFLTYNEGSKQYVVMVEDVITHFINHLFTGYEVLNTFIFRITRNADLTIHEDGAEDLLIEIERFLKERKSGSAVRLEVDNRTASIEDLGWLTDTLEVDEQDVYLLNGPLDLTFIFGLVDHLSHKLKYLTYDKYTPQIPRSLGNNNVYDLALKRDVFFHHPYESFEPIVDFIREAAEDPNTIAIKQTLYRVSKDSPIIKSLKEAAENGKQVTVLVELKARFDEENNVHWARMLEDAGCHVIYGMTHLKTHSKIALVVKRIGGELTSFVHLGTGNYNDKTAKLYTDMGVITTDKLIAEDAINFFNYLSGYSVKPEYNKLIVAPFDIRDVFIDRIDKEIASHRQHGNGKIMMKMNSLTDKAIIEKLFEASQAGVKIQLIIRGICCLKPGIPGVSENIEVVSIVGRLLEHSRIYYFYNNGDERIYLSSADVMTRNMIKRVEILFPVEDKEIGKRLVDFMNLQLSDNQKGRYQDQYGDYHYVQNDLSPLNSQAYLMKEAVKYGKKLKKETTQPSGMPVVSKRRASWVNRLRKTLKK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 104094 106259 . - 0 GCA_005502385.1_01714 GCA_005502385.1_01714_gene,GCA_005502385.1_01714_mRNA GCA_005502385.1_01714 Polyphosphate kinase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MQTQLGDYDISLPKYYNNRELSWLDFNYRVLQEAYDNNNPLLEKLNFVSIFSSNLDEFFMVRVAGLKDQVKMGFDKPENKTQMTPQEQVDAIQEKAKKYVNMQYERYNELIEELRNYDIVMCKPENLSDSILSKLERDFKLTILPTLTPLGIDAYHPFPKLNNKSLNIFVDIDTDDAINSAIVQIPSLIPRFLTYNEGSKQYVVMVEDVITHFINHLFTGYEVLNTFIFRITRNADLTIHEDGAEDLLIEIERFLKERKSGSAVRLEVDNRTASIEDLGWLTDTLEVDEQDVYLLNGPLDLTFIFGLVDHLSHKLKYLTYDKYTPQIPRSLGNNNVYDLALKRDVFFHHPYESFEPIVDFIREAAEDPNTIAIKQTLYRVSKDSPIIKSLKEAAENGKQVTVLVELKARFDEENNVHWARMLEDAGCHVIYGMTHLKTHSKIALVVKRIGGELTSFVHLGTGNYNDKTAKLYTDMGVITTDKLIAEDAINFFNYLSGYSVKPEYNKLIVAPFDIRDVFIDRIDKEIASHRQHGNGKIMMKMNSLTDKAIIEKLFEASQAGVKIQLIIRGICCLKPGIPGVSENIEVVSIVGRLLEHSRIYYFYNNGDERIYLSSADVMTRNMIKRVEILFPVEDKEIGKRLVDFMNLQLSDNQKGRYQDQYGDYHYVQNDLSPLNSQAYLMKEAVKYGKKLKKETTQPSGMPVVSKRRASWVNRLRKTLKK persistent 721 RNA degradosome polyphosphate kinase 2.7.4.1 GO:0006799,GO:0008976,GO:0009358 UniRef50_Q5HLE0,UniRef90_A0A974QNG5 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 106362 107903 . - . GCA_005502385.1_01715_gene GCA_005502385.1_01715 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MEERIGLIDIGSNTIRLVIFRFSKDAGLNELLNIKTPARLSQYLTKENKMSQEGIKVLIEALRSFKSVSEKFEVKELHPIATAAIRQSENKDDIVKKVKDELDIEISIIPEKDEAYYGYYAITHTTEIENGVSVDIGGGSTEVTLFKDKELFESHSFPFGVVTLKHKFFDGKDHNDKGAIKDMEKFLSQQFSTLDWLKDQDVALVGVGGSARNVARIHQSEHAYPISGVHNYTMSDKDIDEVYNVIRKSSRDELNNLDGLSRDRADIILPAVSVFKTLYKKIDAKQFTFSRNGLREGYIIKQIRSRYPDVFDKNNVRKESIYFLAHDYHIEEHSSQGRLKLAQSLLKQLMDLGDLKINDTEQRLFEEATYIYYLGRFIDSDSSSPHTYYIIANSMINGYTHKDRVKLALLASFKNKSLLKFYCKETDWFSNKEIETIQALGGIIKFVNALNISQTSFVEDVTLKETKKGNDDYELTVHYTEGEPIAEKYQALRQKKHIEKILKGSVSIVFTKS . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 106362 107903 . - . GCA_005502385.1_01715_mRNA GCA_005502385.1_01715 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MEERIGLIDIGSNTIRLVIFRFSKDAGLNELLNIKTPARLSQYLTKENKMSQEGIKVLIEALRSFKSVSEKFEVKELHPIATAAIRQSENKDDIVKKVKDELDIEISIIPEKDEAYYGYYAITHTTEIENGVSVDIGGGSTEVTLFKDKELFESHSFPFGVVTLKHKFFDGKDHNDKGAIKDMEKFLSQQFSTLDWLKDQDVALVGVGGSARNVARIHQSEHAYPISGVHNYTMSDKDIDEVYNVIRKSSRDELNNLDGLSRDRADIILPAVSVFKTLYKKIDAKQFTFSRNGLREGYIIKQIRSRYPDVFDKNNVRKESIYFLAHDYHIEEHSSQGRLKLAQSLLKQLMDLGDLKINDTEQRLFEEATYIYYLGRFIDSDSSSPHTYYIIANSMINGYTHKDRVKLALLASFKNKSLLKFYCKETDWFSNKEIETIQALGGIIKFVNALNISQTSFVEDVTLKETKKGNDDYELTVHYTEGEPIAEKYQALRQKKHIEKILKGSVSIVFTKS . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 106362 107903 . - 0 GCA_005502385.1_01715 GCA_005502385.1_01715_gene,GCA_005502385.1_01715_mRNA GCA_005502385.1_01715 Exopolyphosphatase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MEERIGLIDIGSNTIRLVIFRFSKDAGLNELLNIKTPARLSQYLTKENKMSQEGIKVLIEALRSFKSVSEKFEVKELHPIATAAIRQSENKDDIVKKVKDELDIEISIIPEKDEAYYGYYAITHTTEIENGVSVDIGGGSTEVTLFKDKELFESHSFPFGVVTLKHKFFDGKDHNDKGAIKDMEKFLSQQFSTLDWLKDQDVALVGVGGSARNVARIHQSEHAYPISGVHNYTMSDKDIDEVYNVIRKSSRDELNNLDGLSRDRADIILPAVSVFKTLYKKIDAKQFTFSRNGLREGYIIKQIRSRYPDVFDKNNVRKESIYFLAHDYHIEEHSSQGRLKLAQSLLKQLMDLGDLKINDTEQRLFEEATYIYYLGRFIDSDSSSPHTYYIIANSMINGYTHKDRVKLALLASFKNKSLLKFYCKETDWFSNKEIETIQALGGIIKFVNALNISQTSFVEDVTLKETKKGNDDYELTVHYTEGEPIAEKYQALRQKKHIEKILKGSVSIVFTKS persistent 513 ppx exopolyphosphatase 3.6.1.11,3.6.1.40 GO:0000287,GO:0004309,GO:0006798 WP_061815437.1 UPI0007653463 UniRef100_UPI0007653463,UniRef50_A0A166QCY1,UniRef90_A0A3S7GVW0 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 108119 108937 . + . GCA_005502385.1_01716_gene GCA_005502385.1_01716 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKRLENKIAVITGASTGIGQASAKVLAKEGAHVLALDISDELEKTVDDINQEGGKATAYKVDISQDQQVKDFAEKVKQDYGHIDIIFNNAGVDNGAGRIHEYPVEVFDKIMSVDMRGTFLVTKFLLPLMLDNGGSIINTASFSGQAADLYRSGYNAAKGGVINFTKSIAIEYGRENIRANAIAPGTIETPLVDHLAGTSEDEAGKTFRDNQKWVTPLGRLGQPEEVGKLVAFLASDDSSFITGETIRIDGGVMAYTWPGEMLSEDKWKHSVE . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 108119 108937 . + . GCA_005502385.1_01716_mRNA GCA_005502385.1_01716 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKRLENKIAVITGASTGIGQASAKVLAKEGAHVLALDISDELEKTVDDINQEGGKATAYKVDISQDQQVKDFAEKVKQDYGHIDIIFNNAGVDNGAGRIHEYPVEVFDKIMSVDMRGTFLVTKFLLPLMLDNGGSIINTASFSGQAADLYRSGYNAAKGGVINFTKSIAIEYGRENIRANAIAPGTIETPLVDHLAGTSEDEAGKTFRDNQKWVTPLGRLGQPEEVGKLVAFLASDDSSFITGETIRIDGGVMAYTWPGEMLSEDKWKHSVE . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 108119 108937 . + 0 GCA_005502385.1_01716 GCA_005502385.1_01716_gene,GCA_005502385.1_01716_mRNA GCA_005502385.1_01716 Oxidoreductase UcpA GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKRLENKIAVITGASTGIGQASAKVLAKEGAHVLALDISDELEKTVDDINQEGGKATAYKVDISQDQQVKDFAEKVKQDYGHIDIIFNNAGVDNGAGRIHEYPVEVFDKIMSVDMRGTFLVTKFLLPLMLDNGGSIINTASFSGQAADLYRSGYNAAKGGVINFTKSIAIEYGRENIRANAIAPGTIETPLVDHLAGTSEDEAGKTFRDNQKWVTPLGRLGQPEEVGKLVAFLASDDSSFITGETIRIDGGVMAYTWPGEMLSEDKWKHSVE persistent 272 SDR family oxidoreductase WP_049434370.1 UPI00066DABAD UniRef100_A0A974KXS9,UniRef50_P46331,UniRef90_A0A3S7GWB7 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 109325 110401 . - . GCA_005502385.1_01717_gene GCA_005502385.1_01717 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKESIELLKTLTDVNGIAGYEYQVKEKMRDYLTPISDEIIEDGLGGIFGKKESKTGSKSLMLAGHLDEIGFIVTKIDNNGFIKFQPIGGWWSQVMLSQKVTITTDDGKEIRGIIGSKPPHVLEPEARKKSIDIKDMFIDIGVRSKADAEQYGIEIGNMITPYSEFEQLANGKYLTAKAFDNRYGCALTIDVLNNLKDESIGINLYAGGTVQEEVGLRGAKVAANKINPDLAIAVDVAVAYDTPGMAQYGSDTAIGDGPVIILMDASNVAHQGLRQHIKEVAKKHYITVQWDTTPRGGTDAGSIHVANDGIPTIAIGVALRYMHSNVSVLHTDDYENSVRLITEIVRSLNDQTYNQIKW . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 109325 110401 . - . GCA_005502385.1_01717_mRNA GCA_005502385.1_01717 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKESIELLKTLTDVNGIAGYEYQVKEKMRDYLTPISDEIIEDGLGGIFGKKESKTGSKSLMLAGHLDEIGFIVTKIDNNGFIKFQPIGGWWSQVMLSQKVTITTDDGKEIRGIIGSKPPHVLEPEARKKSIDIKDMFIDIGVRSKADAEQYGIEIGNMITPYSEFEQLANGKYLTAKAFDNRYGCALTIDVLNNLKDESIGINLYAGGTVQEEVGLRGAKVAANKINPDLAIAVDVAVAYDTPGMAQYGSDTAIGDGPVIILMDASNVAHQGLRQHIKEVAKKHYITVQWDTTPRGGTDAGSIHVANDGIPTIAIGVALRYMHSNVSVLHTDDYENSVRLITEIVRSLNDQTYNQIKW . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 109325 110401 . - 0 GCA_005502385.1_01717 GCA_005502385.1_01717_gene,GCA_005502385.1_01717_mRNA GCA_005502385.1_01717 Putative aminopeptidase YsdC GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKESIELLKTLTDVNGIAGYEYQVKEKMRDYLTPISDEIIEDGLGGIFGKKESKTGSKSLMLAGHLDEIGFIVTKIDNNGFIKFQPIGGWWSQVMLSQKVTITTDDGKEIRGIIGSKPPHVLEPEARKKSIDIKDMFIDIGVRSKADAEQYGIEIGNMITPYSEFEQLANGKYLTAKAFDNRYGCALTIDVLNNLKDESIGINLYAGGTVQEEVGLRGAKVAANKINPDLAIAVDVAVAYDTPGMAQYGSDTAIGDGPVIILMDASNVAHQGLRQHIKEVAKKHYITVQWDTTPRGGTDAGSIHVANDGIPTIAIGVALRYMHSNVSVLHTDDYENSVRLITEIVRSLNDQTYNQIKW persistent 358 M42 family metallopeptidase WP_049434368.1 UPI00066BAA95 UniRef100_UPI00066BAA95,UniRef50_A0A390YIZ1,UniRef90_A0A3S7GW69 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 110557 111024 . + . GCA_005502385.1_01718_gene GCA_005502385.1_01718 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSIMKKVLTLFVLSVLSVCILGACSQSRSKTYEGDIDGKHVLTTLTYKKNKVIKQSTVSTLKYDDLGMSKQEGEKSFKDYRPLKGEKGVTYTLSSRHQKIVENIDIDYNKANLKDVSRYFALAHYSKNYKKVTMDGTVKELKKIGFKKKSNMNEE . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 110557 111024 . + . GCA_005502385.1_01718_mRNA GCA_005502385.1_01718 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSIMKKVLTLFVLSVLSVCILGACSQSRSKTYEGDIDGKHVLTTLTYKKNKVIKQSTVSTLKYDDLGMSKQEGEKSFKDYRPLKGEKGVTYTLSSRHQKIVENIDIDYNKANLKDVSRYFALAHYSKNYKKVTMDGTVKELKKIGFKKKSNMNEE . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 110557 111024 . + 0 GCA_005502385.1_01718 GCA_005502385.1_01718_gene,GCA_005502385.1_01718_mRNA GCA_005502385.1_01718 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSIMKKVLTLFVLSVLSVCILGACSQSRSKTYEGDIDGKHVLTTLTYKKNKVIKQSTVSTLKYDDLGMSKQEGEKSFKDYRPLKGEKGVTYTLSSRHQKIVENIDIDYNKANLKDVSRYFALAHYSKNYKKVTMDGTVKELKKIGFKKKSNMNEE persistent 155 DUF1307 domain-containing protein UniRef50_Q4L8X4,UniRef90_A0AAE5JPF5 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 111078 112658 . - . GCA_005502385.1_01719_gene GCA_005502385.1_01719 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTTLLTVMQFIVNILIIMVLLSILMVGLYLLFKDKRQEQHSVLRNFPVLGRVRYFSEKIGPELRQYLFANDTEGKPFSRNQYTDIVLAGKYHSRMTSFGTEKNYEEGFYIRNAMFPLQKSELQIDNHSMISTFIYSIDNERLFKREEHRENKHIDPYYLSDDHAVIIGEELAHPFKVKRLVGQSGMSYGSLGGRAITALSQGLARAGTWMNTGEGGLSEYHLKGGCDIIYQIGPGLFGVRDKDGGFSEEAFLNVANHKEVKAFEIKLAQGAKTRGGHMEGNKVTEEIAKIRNIEPYKTINSPNRFDFINNPKELLEFVAKLQKLGQKPVGFKIVVSRVDEVEALVQEMINLDIYPNFITVDGGEGGTGATFQELQDGVGLPLFTALPIVTGVLERYDARKYMKIFASGKLITPDKIAIALGLGADLCNIARGMMISIGCIMSQQCHLNTCPVGVATTDPKKEKALIVEEKQYRVTNYVTSLHEGLFNVAAAVGVKSPNEITEDHIVIKRKNGHIEDIASYKLKLIQ . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 111078 112658 . - . GCA_005502385.1_01719_mRNA GCA_005502385.1_01719 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTTLLTVMQFIVNILIIMVLLSILMVGLYLLFKDKRQEQHSVLRNFPVLGRVRYFSEKIGPELRQYLFANDTEGKPFSRNQYTDIVLAGKYHSRMTSFGTEKNYEEGFYIRNAMFPLQKSELQIDNHSMISTFIYSIDNERLFKREEHRENKHIDPYYLSDDHAVIIGEELAHPFKVKRLVGQSGMSYGSLGGRAITALSQGLARAGTWMNTGEGGLSEYHLKGGCDIIYQIGPGLFGVRDKDGGFSEEAFLNVANHKEVKAFEIKLAQGAKTRGGHMEGNKVTEEIAKIRNIEPYKTINSPNRFDFINNPKELLEFVAKLQKLGQKPVGFKIVVSRVDEVEALVQEMINLDIYPNFITVDGGEGGTGATFQELQDGVGLPLFTALPIVTGVLERYDARKYMKIFASGKLITPDKIAIALGLGADLCNIARGMMISIGCIMSQQCHLNTCPVGVATTDPKKEKALIVEEKQYRVTNYVTSLHEGLFNVAAAVGVKSPNEITEDHIVIKRKNGHIEDIASYKLKLIQ . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 111078 112658 . - 0 GCA_005502385.1_01719 GCA_005502385.1_01719_gene,GCA_005502385.1_01719_mRNA GCA_005502385.1_01719 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTTLLTVMQFIVNILIIMVLLSILMVGLYLLFKDKRQEQHSVLRNFPVLGRVRYFSEKIGPELRQYLFANDTEGKPFSRNQYTDIVLAGKYHSRMTSFGTEKNYEEGFYIRNAMFPLQKSELQIDNHSMISTFIYSIDNERLFKREEHRENKHIDPYYLSDDHAVIIGEELAHPFKVKRLVGQSGMSYGSLGGRAITALSQGLARAGTWMNTGEGGLSEYHLKGGCDIIYQIGPGLFGVRDKDGGFSEEAFLNVANHKEVKAFEIKLAQGAKTRGGHMEGNKVTEEIAKIRNIEPYKTINSPNRFDFINNPKELLEFVAKLQKLGQKPVGFKIVVSRVDEVEALVQEMINLDIYPNFITVDGGEGGTGATFQELQDGVGLPLFTALPIVTGVLERYDARKYMKIFASGKLITPDKIAIALGLGADLCNIARGMMISIGCIMSQQCHLNTCPVGVATTDPKKEKALIVEEKQYRVTNYVTSLHEGLFNVAAAVGVKSPNEITEDHIVIKRKNGHIEDIASYKLKLIQ persistent 526 Glutamate synthase domain-containing protein WP_048762202.1 UPI000660F175 UniRef100_UPI000660F175,UniRef50_O34849,UniRef90_A0AAE5MZB3 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 112843 113625 . + . GCA_005502385.1_01720_gene GCA_005502385.1_01720 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKEKDVITQVVSKNRWGNPEIIKKDFLLIPLFIFFQILTPIIIVFGVLGVTAMVTQQPPPSYLYNVMLSLSFVIAQFIVLGLFFTLHKFYITSVVRRQYRIAIHQYLKLIIITVIVSVMLYYGFNALAHMLPHPFGYVDTQAQRRLEGLFIHPSALIFTFISVVLLRPLIDELLFRHLLIHELGKKFNLLVMMIVSVLIETIVQVYDLISILEAMPYMIISIGAVIVYMKSGKNLAASYLYHSTVQLIIFIITMIDKLV . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 112843 113625 . + . GCA_005502385.1_01720_mRNA GCA_005502385.1_01720 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKEKDVITQVVSKNRWGNPEIIKKDFLLIPLFIFFQILTPIIIVFGVLGVTAMVTQQPPPSYLYNVMLSLSFVIAQFIVLGLFFTLHKFYITSVVRRQYRIAIHQYLKLIIITVIVSVMLYYGFNALAHMLPHPFGYVDTQAQRRLEGLFIHPSALIFTFISVVLLRPLIDELLFRHLLIHELGKKFNLLVMMIVSVLIETIVQVYDLISILEAMPYMIISIGAVIVYMKSGKNLAASYLYHSTVQLIIFIITMIDKLV . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 112843 113625 . + 0 GCA_005502385.1_01720 GCA_005502385.1_01720_gene,GCA_005502385.1_01720_mRNA GCA_005502385.1_01720 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKEKDVITQVVSKNRWGNPEIIKKDFLLIPLFIFFQILTPIIIVFGVLGVTAMVTQQPPPSYLYNVMLSLSFVIAQFIVLGLFFTLHKFYITSVVRRQYRIAIHQYLKLIIITVIVSVMLYYGFNALAHMLPHPFGYVDTQAQRRLEGLFIHPSALIFTFISVVLLRPLIDELLFRHLLIHELGKKFNLLVMMIVSVLIETIVQVYDLISILEAMPYMIISIGAVIVYMKSGKNLAASYLYHSTVQLIIFIITMIDKLV persistent 260 lnsB CPBP family lipoprotein N-acylation protein LnsB WP_048678920.1 UPI0006611D8A UniRef100_UPI0006611D8A,UniRef50_Q4L8X1,UniRef90_A0AAE5MZ06 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 113648 114457 . + . GCA_005502385.1_01721_gene GCA_005502385.1_01721 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTSEHNDTYYQTSEQRPIRNEFDSKRIVKRDFWLIPTYLVMNIVFPLILTFIVMGIISGITGGHISESKFTKYYLGYAQVFTLIGQCLVLVVFYLMHRKTIIPIAISRFKALKKHIPLIIIVMVALYLLQGAYGYLMEFLPKQYQFDDTENNKMIIKMFEINWLWPVLFLDIVIITPFVEELLFRHLLIHELGKKLTYGVMYVVSVLGFAGLHMTSASSPFEVGPYLIMATGFVVAYHLSGRNLAMTITLHMINNFISFIAIIMSIIWG . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 113648 114457 . + . GCA_005502385.1_01721_mRNA GCA_005502385.1_01721 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTSEHNDTYYQTSEQRPIRNEFDSKRIVKRDFWLIPTYLVMNIVFPLILTFIVMGIISGITGGHISESKFTKYYLGYAQVFTLIGQCLVLVVFYLMHRKTIIPIAISRFKALKKHIPLIIIVMVALYLLQGAYGYLMEFLPKQYQFDDTENNKMIIKMFEINWLWPVLFLDIVIITPFVEELLFRHLLIHELGKKLTYGVMYVVSVLGFAGLHMTSASSPFEVGPYLIMATGFVVAYHLSGRNLAMTITLHMINNFISFIAIIMSIIWG . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 113648 114457 . + 0 GCA_005502385.1_01721 GCA_005502385.1_01721_gene,GCA_005502385.1_01721_mRNA GCA_005502385.1_01721 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTSEHNDTYYQTSEQRPIRNEFDSKRIVKRDFWLIPTYLVMNIVFPLILTFIVMGIISGITGGHISESKFTKYYLGYAQVFTLIGQCLVLVVFYLMHRKTIIPIAISRFKALKKHIPLIIIVMVALYLLQGAYGYLMEFLPKQYQFDDTENNKMIIKMFEINWLWPVLFLDIVIITPFVEELLFRHLLIHELGKKLTYGVMYVVSVLGFAGLHMTSASSPFEVGPYLIMATGFVVAYHLSGRNLAMTITLHMINNFISFIAIIMSIIWG persistent 269 Abortive phage infection protein WP_048678923.1 UPI0006602510 UniRef100_UPI0006602510,UniRef50_Q4L8X0,UniRef90_A0A3S7GYZ6 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 114587 115249 . + . GCA_005502385.1_01722_gene GCA_005502385.1_01722 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MLLEVKHLTYKADQRTILNNINFKLDQGETVAVVGPSGSGKSTFLKQLNNLISPTEGELLFKGKPYDEYRPEELRSKISYMMQQSELFGTTVEDNMVFPALTHHDQFDEDKANDLLNKVGLSNYSLDSKVKHMSGGERQRIAIARQLMYQPEILLLDESTSALDTQNKEKIEDIIFKLADEGVAILWITHSNDQSMRNFQRRITIKDGQITNEEVLNHNE . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 114587 115249 . + . GCA_005502385.1_01722_mRNA GCA_005502385.1_01722 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MLLEVKHLTYKADQRTILNNINFKLDQGETVAVVGPSGSGKSTFLKQLNNLISPTEGELLFKGKPYDEYRPEELRSKISYMMQQSELFGTTVEDNMVFPALTHHDQFDEDKANDLLNKVGLSNYSLDSKVKHMSGGERQRIAIARQLMYQPEILLLDESTSALDTQNKEKIEDIIFKLADEGVAILWITHSNDQSMRNFQRRITIKDGQITNEEVLNHNE . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 114587 115249 . + 0 GCA_005502385.1_01722 GCA_005502385.1_01722_gene,GCA_005502385.1_01722_mRNA GCA_005502385.1_01722 putative iron export ATP-binding protein FetA GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MLLEVKHLTYKADQRTILNNINFKLDQGETVAVVGPSGSGKSTFLKQLNNLISPTEGELLFKGKPYDEYRPEELRSKISYMMQQSELFGTTVEDNMVFPALTHHDQFDEDKANDLLNKVGLSNYSLDSKVKHMSGGERQRIAIARQLMYQPEILLLDESTSALDTQNKEKIEDIIFKLADEGVAILWITHSNDQSMRNFQRRITIKDGQITNEEVLNHNE persistent 220 ATP-binding cassette domain-containing protein UniRef50_A0A0D0SPN6,UniRef90_A0A3S7GZW2 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 115242 116018 . + . GCA_005502385.1_01723_gene GCA_005502385.1_01723 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSNTALCLTALLLLIPIIISYKEGLHIIKDLVVASIRAVVQLLILGLILEYIFKIDQVWILLIAVLVIIINASWNTINRASPVMHHVFWISFVSIFISTAIPLACAVLAGAIDFKANDVIPIGGMLANNGLIAINLAYQNLDRAFVRDVDDIESKLTLAATPKLASKGAIRESIRLAIVPTIDSVKTYGLVSIPGMMTGLIIGGMAPLQAIKFQLLVVFIHTTATIMSALIATYLSYGQFFNARHQLVARTTNIKDNN . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 115242 116018 . + . GCA_005502385.1_01723_mRNA GCA_005502385.1_01723 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSNTALCLTALLLLIPIIISYKEGLHIIKDLVVASIRAVVQLLILGLILEYIFKIDQVWILLIAVLVIIINASWNTINRASPVMHHVFWISFVSIFISTAIPLACAVLAGAIDFKANDVIPIGGMLANNGLIAINLAYQNLDRAFVRDVDDIESKLTLAATPKLASKGAIRESIRLAIVPTIDSVKTYGLVSIPGMMTGLIIGGMAPLQAIKFQLLVVFIHTTATIMSALIATYLSYGQFFNARHQLVARTTNIKDNN . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 115242 116018 . + 0 GCA_005502385.1_01723 GCA_005502385.1_01723_gene,GCA_005502385.1_01723_mRNA GCA_005502385.1_01723 putative iron export permease protein FetB GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSNTALCLTALLLLIPIIISYKEGLHIIKDLVVASIRAVVQLLILGLILEYIFKIDQVWILLIAVLVIIINASWNTINRASPVMHHVFWISFVSIFISTAIPLACAVLAGAIDFKANDVIPIGGMLANNGLIAINLAYQNLDRAFVRDVDDIESKLTLAATPKLASKGAIRESIRLAIVPTIDSVKTYGLVSIPGMMTGLIIGGMAPLQAIKFQLLVVFIHTTATIMSALIATYLSYGQFFNARHQLVARTTNIKDNN persistent 258 fetB Iron export ABC transporter permease subunit FetB WP_019835004.1 UPI000373B463 UniRef100_UPI000373B463,UniRef50_A0A0D0SFV4,UniRef90_A0A3S7GVQ9 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 116150 117325 . + . GCA_005502385.1_01724_gene GCA_005502385.1_01724 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSVMRVATFIISVFIVGMVEMMVAGIMNLMSGDLGVSEAIIGQLVTLYALTFAICGPILVKLTNRFAVRPVLLWTLVAFIIGNAMIAVAPNFTILVIGRILSSAAASLIIVKVLALTAMLTIPKNRGKMIGVVYTGFSGANVFGVPIGTMIGDAIGWRFTFLFIIIVSVIAGVLMMVYLPSTSELNQVQRQWGSTSNKQLNTSKILRPVEVVKYLAITFLILVANSVTFVYINPLILNHGHQMGFVSLALLVNGIAGVIGTSLGGILADKLSSKRWLIIAFSIFIVMMLIMNLILHTVTLLLIGLFIWNIVQWSTNPAIQSGIIEHVEGDTSQVMSWNMSSLNAGIGFGGIIGGLVVSNISVQAVTIVSAMVGAMGLIIVISLKNMSYIKN . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 116150 117325 . + . GCA_005502385.1_01724_mRNA GCA_005502385.1_01724 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSVMRVATFIISVFIVGMVEMMVAGIMNLMSGDLGVSEAIIGQLVTLYALTFAICGPILVKLTNRFAVRPVLLWTLVAFIIGNAMIAVAPNFTILVIGRILSSAAASLIIVKVLALTAMLTIPKNRGKMIGVVYTGFSGANVFGVPIGTMIGDAIGWRFTFLFIIIVSVIAGVLMMVYLPSTSELNQVQRQWGSTSNKQLNTSKILRPVEVVKYLAITFLILVANSVTFVYINPLILNHGHQMGFVSLALLVNGIAGVIGTSLGGILADKLSSKRWLIIAFSIFIVMMLIMNLILHTVTLLLIGLFIWNIVQWSTNPAIQSGIIEHVEGDTSQVMSWNMSSLNAGIGFGGIIGGLVVSNISVQAVTIVSAMVGAMGLIIVISLKNMSYIKN . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 116150 117325 . + 0 GCA_005502385.1_01724 GCA_005502385.1_01724_gene,GCA_005502385.1_01724_mRNA GCA_005502385.1_01724 Purine efflux pump PbuE GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MSVMRVATFIISVFIVGMVEMMVAGIMNLMSGDLGVSEAIIGQLVTLYALTFAICGPILVKLTNRFAVRPVLLWTLVAFIIGNAMIAVAPNFTILVIGRILSSAAASLIIVKVLALTAMLTIPKNRGKMIGVVYTGFSGANVFGVPIGTMIGDAIGWRFTFLFIIIVSVIAGVLMMVYLPSTSELNQVQRQWGSTSNKQLNTSKILRPVEVVKYLAITFLILVANSVTFVYINPLILNHGHQMGFVSLALLVNGIAGVIGTSLGGILADKLSSKRWLIIAFSIFIVMMLIMNLILHTVTLLLIGLFIWNIVQWSTNPAIQSGIIEHVEGDTSQVMSWNMSSLNAGIGFGGIIGGLVVSNISVQAVTIVSAMVGAMGLIIVISLKNMSYIKN persistent 391 Chloramphenicol resistance protein WP_048682568.1 UPI00066173C6 UniRef100_UPI00066173C6,UniRef50_Q2FVG2,UniRef90_A0A3S7GVX2 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 117374 118723 . - . GCA_005502385.1_01725_gene GCA_005502385.1_01725 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTLIKTHGGDIKGYTKKKINYFLGIPYANQPINEHRFKHSKCLKTWNKTIEATSFKSIPPQPYNKLETFFSSHAQLFNQSEDCLYLNIWCQNNQYNNKPVIIYFYGGGFVNGHGSQELYTPEHIVEQHDVIVITFNYRLGALGFLDWSYFNSDYNKNNGLSDQINALKWIHTFIKYFGGNSNNITLMGQSAGSMSIMALMQRPELDKYYHQVMLLSGTLRLDSHLLGQKKAAHFAYLKDTYFPKKRMTHLTTLEILSLMAYDEASRGKSKGLELIYAPIQESNMSRPLSQFTKPVVIGTTKEEGNIYIRNESRKLSPERFVEVMTLNDIHLHISQAQTGKDQARMVTTHYFETPAISFLNQLDNNPHCWKLRFDWCLSNASPFQSAYHILDLVFWFGKLEILKAHGVNSLEHERHLSKHMIDDLIYFATYHTMPWPSYSPQTPYCYIYK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 117374 118723 . - . GCA_005502385.1_01725_mRNA GCA_005502385.1_01725 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTLIKTHGGDIKGYTKKKINYFLGIPYANQPINEHRFKHSKCLKTWNKTIEATSFKSIPPQPYNKLETFFSSHAQLFNQSEDCLYLNIWCQNNQYNNKPVIIYFYGGGFVNGHGSQELYTPEHIVEQHDVIVITFNYRLGALGFLDWSYFNSDYNKNNGLSDQINALKWIHTFIKYFGGNSNNITLMGQSAGSMSIMALMQRPELDKYYHQVMLLSGTLRLDSHLLGQKKAAHFAYLKDTYFPKKRMTHLTTLEILSLMAYDEASRGKSKGLELIYAPIQESNMSRPLSQFTKPVVIGTTKEEGNIYIRNESRKLSPERFVEVMTLNDIHLHISQAQTGKDQARMVTTHYFETPAISFLNQLDNNPHCWKLRFDWCLSNASPFQSAYHILDLVFWFGKLEILKAHGVNSLEHERHLSKHMIDDLIYFATYHTMPWPSYSPQTPYCYIYK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 117374 118723 . - 0 GCA_005502385.1_01725 GCA_005502385.1_01725_gene,GCA_005502385.1_01725_mRNA GCA_005502385.1_01725 Para-nitrobenzyl esterase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTLIKTHGGDIKGYTKKKINYFLGIPYANQPINEHRFKHSKCLKTWNKTIEATSFKSIPPQPYNKLETFFSSHAQLFNQSEDCLYLNIWCQNNQYNNKPVIIYFYGGGFVNGHGSQELYTPEHIVEQHDVIVITFNYRLGALGFLDWSYFNSDYNKNNGLSDQINALKWIHTFIKYFGGNSNNITLMGQSAGSMSIMALMQRPELDKYYHQVMLLSGTLRLDSHLLGQKKAAHFAYLKDTYFPKKRMTHLTTLEILSLMAYDEASRGKSKGLELIYAPIQESNMSRPLSQFTKPVVIGTTKEEGNIYIRNESRKLSPERFVEVMTLNDIHLHISQAQTGKDQARMVTTHYFETPAISFLNQLDNNPHCWKLRFDWCLSNASPFQSAYHILDLVFWFGKLEILKAHGVNSLEHERHLSKHMIDDLIYFATYHTMPWPSYSPQTPYCYIYK persistent 449 Carboxylic ester hydrolase WP_048762192.1 UPI00065F7A75 UniRef100_UPI00065F7A75,UniRef50_A0A0H2WZR3,UniRef90_A0A3S7GZI6 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 118825 120468 . - . GCA_005502385.1_01726_gene GCA_005502385.1_01726 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MGKNKNDNKISLTQLVLLGLGSLIGSGWLFGAWEASSVAGPAAIISWVIGFIVIGTISYNYIEIGTMFPQSGGMSNYAQYTHGSLLGFIAAWANWVSLVTIIPIEAVSAVQYISSWPWDWAKPTQALMHNGSISTVGLFVVYIIIIVFSLLNYWSVKLLTSFTSLISVFKLGVPLLTIIMLTISGFDSGNYGHSLNTFMPYGSAPIFAATTTSGIIFSFNAFQTIINMGSEIKNPEKNIARGIGISLILSAILYIILQSTFITSMPQSMIHSHGWHGINFNSPFADMAILLSINWLAILLYIEAVVSPFGTGVSFVAITGRVLSAMEKNGHIPKFLGKINSKYNIPRVAIAFNAVMSMIMVTLFRDWGVLAAVISTATLVAYLTGPTTVIALRKMGPKLHRPFRGKLLKIMAPLSFVLASLAIYWAMWPTTAEVILIIILGLPIYFFYEYKMNWKNTKKQIGGSLWIIVYLILLAAMSFIGSKEFKGMNWIHYPYDFIAIIVLSLIFYKIGSSSHFNSIYFKRAKKINKKMKDGSPEEAEAAAKGNE . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 118825 120468 . - . GCA_005502385.1_01726_mRNA GCA_005502385.1_01726 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MGKNKNDNKISLTQLVLLGLGSLIGSGWLFGAWEASSVAGPAAIISWVIGFIVIGTISYNYIEIGTMFPQSGGMSNYAQYTHGSLLGFIAAWANWVSLVTIIPIEAVSAVQYISSWPWDWAKPTQALMHNGSISTVGLFVVYIIIIVFSLLNYWSVKLLTSFTSLISVFKLGVPLLTIIMLTISGFDSGNYGHSLNTFMPYGSAPIFAATTTSGIIFSFNAFQTIINMGSEIKNPEKNIARGIGISLILSAILYIILQSTFITSMPQSMIHSHGWHGINFNSPFADMAILLSINWLAILLYIEAVVSPFGTGVSFVAITGRVLSAMEKNGHIPKFLGKINSKYNIPRVAIAFNAVMSMIMVTLFRDWGVLAAVISTATLVAYLTGPTTVIALRKMGPKLHRPFRGKLLKIMAPLSFVLASLAIYWAMWPTTAEVILIIILGLPIYFFYEYKMNWKNTKKQIGGSLWIIVYLILLAAMSFIGSKEFKGMNWIHYPYDFIAIIVLSLIFYKIGSSSHFNSIYFKRAKKINKKMKDGSPEEAEAAAKGNE . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 118825 120468 . - 0 GCA_005502385.1_01726 GCA_005502385.1_01726_gene,GCA_005502385.1_01726_mRNA GCA_005502385.1_01726 Aspartate-proton symporter GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MGKNKNDNKISLTQLVLLGLGSLIGSGWLFGAWEASSVAGPAAIISWVIGFIVIGTISYNYIEIGTMFPQSGGMSNYAQYTHGSLLGFIAAWANWVSLVTIIPIEAVSAVQYISSWPWDWAKPTQALMHNGSISTVGLFVVYIIIIVFSLLNYWSVKLLTSFTSLISVFKLGVPLLTIIMLTISGFDSGNYGHSLNTFMPYGSAPIFAATTTSGIIFSFNAFQTIINMGSEIKNPEKNIARGIGISLILSAILYIILQSTFITSMPQSMIHSHGWHGINFNSPFADMAILLSINWLAILLYIEAVVSPFGTGVSFVAITGRVLSAMEKNGHIPKFLGKINSKYNIPRVAIAFNAVMSMIMVTLFRDWGVLAAVISTATLVAYLTGPTTVIALRKMGPKLHRPFRGKLLKIMAPLSFVLASLAIYWAMWPTTAEVILIIILGLPIYFFYEYKMNWKNTKKQIGGSLWIIVYLILLAAMSFIGSKEFKGMNWIHYPYDFIAIIVLSLIFYKIGSSSHFNSIYFKRAKKINKKMKDGSPEEAEAAAKGNE persistent 547 APC family permease WP_017174999.1 UPI00031D8344 UniRef100_A0A3S7GVW7,UniRef50_A0A4U9TDF7,UniRef90_A0A974QNE4 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 120767 121822 . - . GCA_005502385.1_01727_gene GCA_005502385.1_01727 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKAAVWYGQKDVRVEDREPKELKDNEVKVKVSWAGICGTDLHEYLEGPVFISTDKPDPFLGQKAPVTLGHEFSGIVEEVGKDVTKYKKGDRVVVNPTVSAREKEENLDLYDGYTFIGLGSDGGFAEFTNAPEDNVYHLPENVSAQEGALVEPTAVAVQAVKEGNLLFGDTVAIFGAGPIGLLTVVAAKAAGASKIFVFDLSEERLAKAKEVGATHVVNSGNTDPLEFVNEHTENGVDVTFEVAGVGVTLAQSVKVTRPRGSVVIVSIFAHEVNFDPMLLTNSGVKLTSTIAYTPTTFQQTIDLIANGSLDVKSVVTDKIELADIVESGFNQLVNDKSQAKILVKLNGDQKY . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 120767 121822 . - . GCA_005502385.1_01727_mRNA GCA_005502385.1_01727 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKAAVWYGQKDVRVEDREPKELKDNEVKVKVSWAGICGTDLHEYLEGPVFISTDKPDPFLGQKAPVTLGHEFSGIVEEVGKDVTKYKKGDRVVVNPTVSAREKEENLDLYDGYTFIGLGSDGGFAEFTNAPEDNVYHLPENVSAQEGALVEPTAVAVQAVKEGNLLFGDTVAIFGAGPIGLLTVVAAKAAGASKIFVFDLSEERLAKAKEVGATHVVNSGNTDPLEFVNEHTENGVDVTFEVAGVGVTLAQSVKVTRPRGSVVIVSIFAHEVNFDPMLLTNSGVKLTSTIAYTPTTFQQTIDLIANGSLDVKSVVTDKIELADIVESGFNQLVNDKSQAKILVKLNGDQKY . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 120767 121822 . - 0 GCA_005502385.1_01727 GCA_005502385.1_01727_gene,GCA_005502385.1_01727_mRNA GCA_005502385.1_01727 putative zinc-type alcohol dehydrogenase-like protein YdjJ GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKAAVWYGQKDVRVEDREPKELKDNEVKVKVSWAGICGTDLHEYLEGPVFISTDKPDPFLGQKAPVTLGHEFSGIVEEVGKDVTKYKKGDRVVVNPTVSAREKEENLDLYDGYTFIGLGSDGGFAEFTNAPEDNVYHLPENVSAQEGALVEPTAVAVQAVKEGNLLFGDTVAIFGAGPIGLLTVVAAKAAGASKIFVFDLSEERLAKAKEVGATHVVNSGNTDPLEFVNEHTENGVDVTFEVAGVGVTLAQSVKVTRPRGSVVIVSIFAHEVNFDPMLLTNSGVKLTSTIAYTPTTFQQTIDLIANGSLDVKSVVTDKIELADIVESGFNQLVNDKSQAKILVKLNGDQKY persistent 351 tdh Zinc dependent dehydrogenase COG1063,ER WP_029376761.1 UPI000312C615 UniRef100_A0A3S7GYE0,UniRef50_A0A7W8CVP1,UniRef90_A0A380FXL2 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 122270 123568 . + . GCA_005502385.1_01728_gene GCA_005502385.1_01728 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTLSIKNLTKIYSGNKKAVDNISLNIEAGEFVAFIGTSGSGKTTALRMINRMIEPTEGSIEMNGKDVRNMNPVELRRSIGYVIQQIGLMPHMTIRENIVLVPKLLKWSKEKKDAKAKELIKLVDLPEDYLDRYPSELSGGQQQRIGVVRALAAEQDIILMDEPFGALDPITRDTLQDLVKDLQKKLGKTFIFVTHDMDEAIKLADKICIMSKGQIVQYDTPDNVLRYPANDFVREFIGQNRLIQDRPNMRTVEDAMIKPITIQADDSLNDAVNIMRTHRIDTIFVVNNKHRLLGFLDIEDINQGLRQGKELIDTMQRDVYKVHIDSKLQDSVRTILKRNVRNVPVVDDHDTLIGLITRANLVDIVYDSIWGEENETSHSSKTYSNEVERENERQNETQQRLTTQGTQRYHEDIMNGTDREHTHNTDDTGVDR . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 122270 123568 . + . GCA_005502385.1_01728_mRNA GCA_005502385.1_01728 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTLSIKNLTKIYSGNKKAVDNISLNIEAGEFVAFIGTSGSGKTTALRMINRMIEPTEGSIEMNGKDVRNMNPVELRRSIGYVIQQIGLMPHMTIRENIVLVPKLLKWSKEKKDAKAKELIKLVDLPEDYLDRYPSELSGGQQQRIGVVRALAAEQDIILMDEPFGALDPITRDTLQDLVKDLQKKLGKTFIFVTHDMDEAIKLADKICIMSKGQIVQYDTPDNVLRYPANDFVREFIGQNRLIQDRPNMRTVEDAMIKPITIQADDSLNDAVNIMRTHRIDTIFVVNNKHRLLGFLDIEDINQGLRQGKELIDTMQRDVYKVHIDSKLQDSVRTILKRNVRNVPVVDDHDTLIGLITRANLVDIVYDSIWGEENETSHSSKTYSNEVERENERQNETQQRLTTQGTQRYHEDIMNGTDREHTHNTDDTGVDR . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 122270 123568 . + 0 GCA_005502385.1_01728 GCA_005502385.1_01728_gene,GCA_005502385.1_01728_mRNA GCA_005502385.1_01728 Carnitine transport ATP-binding protein OpuCA GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MTLSIKNLTKIYSGNKKAVDNISLNIEAGEFVAFIGTSGSGKTTALRMINRMIEPTEGSIEMNGKDVRNMNPVELRRSIGYVIQQIGLMPHMTIRENIVLVPKLLKWSKEKKDAKAKELIKLVDLPEDYLDRYPSELSGGQQQRIGVVRALAAEQDIILMDEPFGALDPITRDTLQDLVKDLQKKLGKTFIFVTHDMDEAIKLADKICIMSKGQIVQYDTPDNVLRYPANDFVREFIGQNRLIQDRPNMRTVEDAMIKPITIQADDSLNDAVNIMRTHRIDTIFVVNNKHRLLGFLDIEDINQGLRQGKELIDTMQRDVYKVHIDSKLQDSVRTILKRNVRNVPVVDDHDTLIGLITRANLVDIVYDSIWGEENETSHSSKTYSNEVERENERQNETQQRLTTQGTQRYHEDIMNGTDREHTHNTDDTGVDR persistent 432 Quaternary amine transport ATP-binding protein WP_017174997.1 UPI00030BE2C9 UniRef100_A0A3S7GWC7,UniRef50_Q45460,UniRef90_A0A3S7GWC7 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 123568 124203 . + . GCA_005502385.1_01729_gene GCA_005502385.1_01729 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MRDFFAQYGEELVSKTIEHFYISIISLLIAIVVAVPLGILLSKTKRTANVVLTIAGVLQTVPTLAILALMIPIFGVGKTPAIVALFIYVLLPILNNTVLGVQNIDKNIIEAGTSMGMTKLQLMKDVELPLALPLIISGIRLASVYVISWATLASYIGAGGLGDLVFNGLTLYEPPMIISATILVTCLALIVDFLLSLVEKWAVPKGLKVSR . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 123568 124203 . + . GCA_005502385.1_01729_mRNA GCA_005502385.1_01729 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MRDFFAQYGEELVSKTIEHFYISIISLLIAIVVAVPLGILLSKTKRTANVVLTIAGVLQTVPTLAILALMIPIFGVGKTPAIVALFIYVLLPILNNTVLGVQNIDKNIIEAGTSMGMTKLQLMKDVELPLALPLIISGIRLASVYVISWATLASYIGAGGLGDLVFNGLTLYEPPMIISATILVTCLALIVDFLLSLVEKWAVPKGLKVSR . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 123568 124203 . + 0 GCA_005502385.1_01729 GCA_005502385.1_01729_gene,GCA_005502385.1_01729_mRNA GCA_005502385.1_01729 Carnitine transport permease protein OpuCB GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MRDFFAQYGEELVSKTIEHFYISIISLLIAIVVAVPLGILLSKTKRTANVVLTIAGVLQTVPTLAILALMIPIFGVGKTPAIVALFIYVLLPILNNTVLGVQNIDKNIIEAGTSMGMTKLQLMKDVELPLALPLIISGIRLASVYVISWATLASYIGAGGLGDLVFNGLTLYEPPMIISATILVTCLALIVDFLLSLVEKWAVPKGLKVSR persistent 211 opuBB ABC transporter permease COG1174,E WP_017174996.1 UPI00030E5EDE UniRef100_A0A4Q9WP16,UniRef50_O34878,UniRef90_A0A4Q9WJ49 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 124228 125166 . + . GCA_005502385.1_01730_gene GCA_005502385.1_01730 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKDIKYIFIVLALSLVVLSGCGLPGLGDSNSKDSVKITATESSETKIVANIEKLMIEHYTNGDIKPIIIGNLGSSIVQHNALMRGDANMSAVRFTGTELTSVLDAPPTRDANKAMDESQRLFKKKYDQKYYHSLGFENTYAFMVTKETADKYHLEKVSDLEKYKDQLRLGMDTQWMNRAGDGYPAFQKEYGFKFKSARPMQIGLVYDALKNKKLDIAVGYSTDGRIAAYNLKILKDDRNFFPPYDGSPLATEELIKDHPEIDKALTKLENTISTKEMQKLNYEADGKGKEPAVIAEEFIKKHKYFEDKKGGQ . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 124228 125166 . + . GCA_005502385.1_01730_mRNA GCA_005502385.1_01730 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKDIKYIFIVLALSLVVLSGCGLPGLGDSNSKDSVKITATESSETKIVANIEKLMIEHYTNGDIKPIIIGNLGSSIVQHNALMRGDANMSAVRFTGTELTSVLDAPPTRDANKAMDESQRLFKKKYDQKYYHSLGFENTYAFMVTKETADKYHLEKVSDLEKYKDQLRLGMDTQWMNRAGDGYPAFQKEYGFKFKSARPMQIGLVYDALKNKKLDIAVGYSTDGRIAAYNLKILKDDRNFFPPYDGSPLATEELIKDHPEIDKALTKLENTISTKEMQKLNYEADGKGKEPAVIAEEFIKKHKYFEDKKGGQ . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 124228 125166 . + 0 GCA_005502385.1_01730 GCA_005502385.1_01730_gene,GCA_005502385.1_01730_mRNA GCA_005502385.1_01730 Choline-binding protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKDIKYIFIVLALSLVVLSGCGLPGLGDSNSKDSVKITATESSETKIVANIEKLMIEHYTNGDIKPIIIGNLGSSIVQHNALMRGDANMSAVRFTGTELTSVLDAPPTRDANKAMDESQRLFKKKYDQKYYHSLGFENTYAFMVTKETADKYHLEKVSDLEKYKDQLRLGMDTQWMNRAGDGYPAFQKEYGFKFKSARPMQIGLVYDALKNKKLDIAVGYSTDGRIAAYNLKILKDDRNFFPPYDGSPLATEELIKDHPEIDKALTKLENTISTKEMQKLNYEADGKGKEPAVIAEEFIKKHKYFEDKKGGQ persistent 312 Osmoprotectant ABC transporter substrate-binding protein UniRef50_Q45462,UniRef90_A0A8X8GJZ4 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 125169 125846 . + . GCA_005502385.1_01731_gene GCA_005502385.1_01731 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKGNVLSSLYEYYTLNFGYLMELFFKHLLMSIYGVLFACIIGIPIGILIARYSKIAWPVITIANIIQTVPAIAMLAILMLALGLGPSTVVFAVFLYALLPIIKNTYTGMTEVDYNIKDAGKGMGMTNNQVMRMIELPLSLSVIIGGIRIALVVAIGIVAIGSFIGAPTLGDIIIRGTNSTDGTVFILAGAIPIALIAILIDIGLRLLEKKLDPTHRSSKQVQSLR . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 125169 125846 . + . GCA_005502385.1_01731_mRNA GCA_005502385.1_01731 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKGNVLSSLYEYYTLNFGYLMELFFKHLLMSIYGVLFACIIGIPIGILIARYSKIAWPVITIANIIQTVPAIAMLAILMLALGLGPSTVVFAVFLYALLPIIKNTYTGMTEVDYNIKDAGKGMGMTNNQVMRMIELPLSLSVIIGGIRIALVVAIGIVAIGSFIGAPTLGDIIIRGTNSTDGTVFILAGAIPIALIAILIDIGLRLLEKKLDPTHRSSKQVQSLR . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 125169 125846 . + 0 GCA_005502385.1_01731 GCA_005502385.1_01731_gene,GCA_005502385.1_01731_mRNA GCA_005502385.1_01731 Glycine betaine/carnitine/choline transport system permease protein OpuCD GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKGNVLSSLYEYYTLNFGYLMELFFKHLLMSIYGVLFACIIGIPIGILIARYSKIAWPVITIANIIQTVPAIAMLAILMLALGLGPSTVVFAVFLYALLPIIKNTYTGMTEVDYNIKDAGKGMGMTNNQVMRMIELPLSLSVIIGGIRIALVVAIGIVAIGSFIGAPTLGDIIIRGTNSTDGTVFILAGAIPIALIAILIDIGLRLLEKKLDPTHRSSKQVQSLR persistent 225 opuBB Glycine betaine/carnitine/choline ABC transporter COG1174,E WP_049334702.1 UPI00066AE76E UniRef100_A0A974QNF8,UniRef50_P39775,UniRef90_A0A380FZ30 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 125910 126611 . - . GCA_005502385.1_01732_gene GCA_005502385.1_01732 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MADHLGITTPYFGILVSLIPYIIAQYFYKKTNGFFLLAPLFVAMVAGIVFLKVTGISYDNYKIGGDIINFFLEAATISFAIPLYKKRQVLRKYWLQIFGGIAVGTLVALILIYLVATLFHLGDQISASMLPQAATTAIALPVSDGIGGVKELTSLAVILNAVVISALGGKIVKMFKISNPIARGLALGTSGHTLGVAAAKELGETEESMGSIAVVIVGVIIVVIVPPLASLLF . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 125910 126611 . - . GCA_005502385.1_01732_mRNA GCA_005502385.1_01732 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MADHLGITTPYFGILVSLIPYIIAQYFYKKTNGFFLLAPLFVAMVAGIVFLKVTGISYDNYKIGGDIINFFLEAATISFAIPLYKKRQVLRKYWLQIFGGIAVGTLVALILIYLVATLFHLGDQISASMLPQAATTAIALPVSDGIGGVKELTSLAVILNAVVISALGGKIVKMFKISNPIARGLALGTSGHTLGVAAAKELGETEESMGSIAVVIVGVIIVVIVPPLASLLF . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 125910 126611 . - 0 GCA_005502385.1_01732 GCA_005502385.1_01732_gene,GCA_005502385.1_01732_mRNA GCA_005502385.1_01732 Antiholin-like protein LrgB GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MADHLGITTPYFGILVSLIPYIIAQYFYKKTNGFFLLAPLFVAMVAGIVFLKVTGISYDNYKIGGDIINFFLEAATISFAIPLYKKRQVLRKYWLQIFGGIAVGTLVALILIYLVATLFHLGDQISASMLPQAATTAIALPVSDGIGGVKELTSLAVILNAVVISALGGKIVKMFKISNPIARGLALGTSGHTLGVAAAKELGETEESMGSIAVVIVGVIIVVIVPPLASLLF persistent 233 lrgB antiholin-like protein LrgB COG1346,M WP_002448343.1 UPI00019FCC52 UniRef100_A0A8X8GNH1,UniRef50_P60643,UniRef90_A0A380FX05 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 126611 127066 . - . GCA_005502385.1_01733_gene GCA_005502385.1_01733 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAKNNSTTANTQGNKKAGKTYNFFIQVLTIVAVLFVSKIIESFIPFPMPASVIGLVLLFILLSSGVVKLRQVEGVGTALTNNIGFLFVPAGVSVINSLPLLSQHPILIILLIIISTLLLLVSVGYVSQLFVTKTLFPTEEQNEKTRLKEEN . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 126611 127066 . - . GCA_005502385.1_01733_mRNA GCA_005502385.1_01733 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAKNNSTTANTQGNKKAGKTYNFFIQVLTIVAVLFVSKIIESFIPFPMPASVIGLVLLFILLSSGVVKLRQVEGVGTALTNNIGFLFVPAGVSVINSLPLLSQHPILIILLIIISTLLLLVSVGYVSQLFVTKTLFPTEEQNEKTRLKEEN . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 126611 127066 . - 0 GCA_005502385.1_01733 GCA_005502385.1_01733_gene,GCA_005502385.1_01733_mRNA GCA_005502385.1_01733 Antiholin-like protein LrgA GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MAKNNSTTANTQGNKKAGKTYNFFIQVLTIVAVLFVSKIIESFIPFPMPASVIGLVLLFILLSSGVVKLRQVEGVGTALTNNIGFLFVPAGVSVINSLPLLSQHPILIILLIIISTLLLLVSVGYVSQLFVTKTLFPTEEQNEKTRLKEEN persistent 151 lrgA antiholin-like murein hydrolase modulator LrgA WP_017174993.1 UPI0002F06789 UniRef100_A0A3S7GZX0,UniRef50_Q8CN54,UniRef90_A0A3S7GZX0 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 127302 128072 . - . GCA_005502385.1_01734_gene GCA_005502385.1_01734 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MRTLIVDDEPLARNELHYLLNEISDFEIIDEAENIEDTLEKLLCHTYDLVFLDINLMDENGIDLAHKIRKMKQPPYIIFATAHDTFAVKAFELDAVDYILKPFELERIEQAVQKVKRLLNAKQQIQTLSDPIHSPQSQTNTSSYTNHQSVLPIEVDERIYVINLDDIVAISVNNGISTITTLKKTYETTEPLNYYEKKLPKQLFIKIHRATIINKQYIESVEHWFNYTYQVTMTTNVKFQVSRSFMKSFKQEIGLA . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 127302 128072 . - . GCA_005502385.1_01734_mRNA GCA_005502385.1_01734 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MRTLIVDDEPLARNELHYLLNEISDFEIIDEAENIEDTLEKLLCHTYDLVFLDINLMDENGIDLAHKIRKMKQPPYIIFATAHDTFAVKAFELDAVDYILKPFELERIEQAVQKVKRLLNAKQQIQTLSDPIHSPQSQTNTSSYTNHQSVLPIEVDERIYVINLDDIVAISVNNGISTITTLKKTYETTEPLNYYEKKLPKQLFIKIHRATIINKQYIESVEHWFNYTYQVTMTTNVKFQVSRSFMKSFKQEIGLA . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 127302 128072 . - 0 GCA_005502385.1_01734 GCA_005502385.1_01734_gene,GCA_005502385.1_01734_mRNA GCA_005502385.1_01734 Sensory transduction protein LytR GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MRTLIVDDEPLARNELHYLLNEISDFEIIDEAENIEDTLEKLLCHTYDLVFLDINLMDENGIDLAHKIRKMKQPPYIIFATAHDTFAVKAFELDAVDYILKPFELERIEQAVQKVKRLLNAKQQIQTLSDPIHSPQSQTNTSSYTNHQSVLPIEVDERIYVINLDDIVAISVNNGISTITTLKKTYETTEPLNYYEKKLPKQLFIKIHRATIINKQYIESVEHWFNYTYQVTMTTNVKFQVSRSFMKSFKQEIGLA persistent 256 lytR response regulator transcription factor LytR WP_017174992.1 UPI0002FB76AE UniRef100_A0A3S7GVR9,UniRef50_P60611,UniRef90_A0A974KXP6 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 128073 129827 . - . GCA_005502385.1_01735_gene GCA_005502385.1_01735 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MFNLFILLLERVGLIIIIAYILMNINHFKTIMSAREKLRAQIELTILFSLFAIISNFTGIEIEHGKIISSNIYYHLNNETSLANTRVLTIGMSGLIGGPFVAIIVGIISGLSRILIGGANAYIYLFSSVIIALISGFYGYRTMRHNRYPTVLIGAMIGLINESIQMACILIFADDVSNAWALVKFIALPMILINSIGTALFLSIILSTLKQEEQTRAIQTHDVLELANKTLPYFRSGLNEKSARPVAEIILRLMKVSAVAITNKTDILTHVGAGSDHHVAKKEIITNLSKEVIRTGQLKEANSKEDIGCNNPNCPLREAIVVPLMTNGNVAGTLKFYFTDYNHITTSTKQLARGLADIFSSQLELGLAETQSKLLRDAEIKSLQAQVNPHFFFNAINTISALVRIDSEKARKLLLQLSQFFRSNLQGARNSTITLEKELQQVKAYLSLEQARFPDRFTIKYHIDDAYKQVLIPPFIIQILVENAIKHAFKHRRKDNIVCVDVQYKEASLKLSVSDNGHGIAPEKLPSLGQISVASETGTGSALENLNRRLTGLYGSNAKLHFDTSKHGTTVSCMIPYHLIKEER . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 128073 129827 . - . GCA_005502385.1_01735_mRNA GCA_005502385.1_01735 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MFNLFILLLERVGLIIIIAYILMNINHFKTIMSAREKLRAQIELTILFSLFAIISNFTGIEIEHGKIISSNIYYHLNNETSLANTRVLTIGMSGLIGGPFVAIIVGIISGLSRILIGGANAYIYLFSSVIIALISGFYGYRTMRHNRYPTVLIGAMIGLINESIQMACILIFADDVSNAWALVKFIALPMILINSIGTALFLSIILSTLKQEEQTRAIQTHDVLELANKTLPYFRSGLNEKSARPVAEIILRLMKVSAVAITNKTDILTHVGAGSDHHVAKKEIITNLSKEVIRTGQLKEANSKEDIGCNNPNCPLREAIVVPLMTNGNVAGTLKFYFTDYNHITTSTKQLARGLADIFSSQLELGLAETQSKLLRDAEIKSLQAQVNPHFFFNAINTISALVRIDSEKARKLLLQLSQFFRSNLQGARNSTITLEKELQQVKAYLSLEQARFPDRFTIKYHIDDAYKQVLIPPFIIQILVENAIKHAFKHRRKDNIVCVDVQYKEASLKLSVSDNGHGIAPEKLPSLGQISVASETGTGSALENLNRRLTGLYGSNAKLHFDTSKHGTTVSCMIPYHLIKEER . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 128073 129827 . - 0 GCA_005502385.1_01735 GCA_005502385.1_01735_gene,GCA_005502385.1_01735_mRNA GCA_005502385.1_01735 Sensor histidine kinase YpdA GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MFNLFILLLERVGLIIIIAYILMNINHFKTIMSAREKLRAQIELTILFSLFAIISNFTGIEIEHGKIISSNIYYHLNNETSLANTRVLTIGMSGLIGGPFVAIIVGIISGLSRILIGGANAYIYLFSSVIIALISGFYGYRTMRHNRYPTVLIGAMIGLINESIQMACILIFADDVSNAWALVKFIALPMILINSIGTALFLSIILSTLKQEEQTRAIQTHDVLELANKTLPYFRSGLNEKSARPVAEIILRLMKVSAVAITNKTDILTHVGAGSDHHVAKKEIITNLSKEVIRTGQLKEANSKEDIGCNNPNCPLREAIVVPLMTNGNVAGTLKFYFTDYNHITTSTKQLARGLADIFSSQLELGLAETQSKLLRDAEIKSLQAQVNPHFFFNAINTISALVRIDSEKARKLLLQLSQFFRSNLQGARNSTITLEKELQQVKAYLSLEQARFPDRFTIKYHIDDAYKQVLIPPFIIQILVENAIKHAFKHRRKDNIVCVDVQYKEASLKLSVSDNGHGIAPEKLPSLGQISVASETGTGSALENLNRRLTGLYGSNAKLHFDTSKHGTTVSCMIPYHLIKEER persistent 584 histidine kinase 2.7.13.3 WP_048762185.1 UPI00065F8513 UniRef100_UPI00065F8513,UniRef50_Q53705,UniRef90_A0A3S7GVY2 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 130092 131492 . + . GCA_005502385.1_01736_gene GCA_005502385.1_01736 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MESSKEFKGDNRLLVGIIISVLTFWLFAQSLLNIVPTLQSSFNTDLGTINIAVSLSALFSGLFIVGAGDVADKFGRVKMTYLGLGLNIIGSLLLIITPVPWLLLIGRALQGLSGAFIMPSTLAIINEYYIGKERQRALSFWSIGSWGGSGICSLFGGFIASTIGWQWIFIISIALSILSFFLIKHTPETKNEPDTDTDNSGSKFDFIGLILLVITLLSVNVMVTQASDRGLLSPVILSLFGIFLIAGIFFVLREFKTENPLVDFSLFKNKGYSGATLSNFMLNGVAGGTLIVVNTYYQSHLGFTSLQAGLISITYLVAVLVMIRVGEKLLQKLGAKKPLLIGSGFTFLGLLLLSLTFLPNLFYIISSIIGYLLFGIGLGMYATPSTDTAVDQAPDDKVGVASGLYKMASSLGNAFGVALSSTIYGVCAAKMNLELGGLAGVLFNAIIVLTAFFVIFFLIPNKAKRA . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 130092 131492 . + . GCA_005502385.1_01736_mRNA GCA_005502385.1_01736 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MESSKEFKGDNRLLVGIIISVLTFWLFAQSLLNIVPTLQSSFNTDLGTINIAVSLSALFSGLFIVGAGDVADKFGRVKMTYLGLGLNIIGSLLLIITPVPWLLLIGRALQGLSGAFIMPSTLAIINEYYIGKERQRALSFWSIGSWGGSGICSLFGGFIASTIGWQWIFIISIALSILSFFLIKHTPETKNEPDTDTDNSGSKFDFIGLILLVITLLSVNVMVTQASDRGLLSPVILSLFGIFLIAGIFFVLREFKTENPLVDFSLFKNKGYSGATLSNFMLNGVAGGTLIVVNTYYQSHLGFTSLQAGLISITYLVAVLVMIRVGEKLLQKLGAKKPLLIGSGFTFLGLLLLSLTFLPNLFYIISSIIGYLLFGIGLGMYATPSTDTAVDQAPDDKVGVASGLYKMASSLGNAFGVALSSTIYGVCAAKMNLELGGLAGVLFNAIIVLTAFFVIFFLIPNKAKRA . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 130092 131492 . + 0 GCA_005502385.1_01736 GCA_005502385.1_01736_gene,GCA_005502385.1_01736_mRNA GCA_005502385.1_01736 Quinolone resistance protein NorB GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MESSKEFKGDNRLLVGIIISVLTFWLFAQSLLNIVPTLQSSFNTDLGTINIAVSLSALFSGLFIVGAGDVADKFGRVKMTYLGLGLNIIGSLLLIITPVPWLLLIGRALQGLSGAFIMPSTLAIINEYYIGKERQRALSFWSIGSWGGSGICSLFGGFIASTIGWQWIFIISIALSILSFFLIKHTPETKNEPDTDTDNSGSKFDFIGLILLVITLLSVNVMVTQASDRGLLSPVILSLFGIFLIAGIFFVLREFKTENPLVDFSLFKNKGYSGATLSNFMLNGVAGGTLIVVNTYYQSHLGFTSLQAGLISITYLVAVLVMIRVGEKLLQKLGAKKPLLIGSGFTFLGLLLLSLTFLPNLFYIISSIIGYLLFGIGLGMYATPSTDTAVDQAPDDKVGVASGLYKMASSLGNAFGVALSSTIYGVCAAKMNLELGGLAGVLFNAIIVLTAFFVIFFLIPNKAKRA persistent 466 norB Quinolone resistance protein NorB WP_017174990.1 UPI000308C1DB UniRef100_A0A3S7GZJ1,UniRef50_Q2FYJ5,UniRef90_A0A3S7GZJ1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 131749 132681 . + . GCA_005502385.1_01737_gene GCA_005502385.1_01737 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKIAIAGSGALGSGFGAMLYRQGNDVTLIDGWEPQATAVKHEGLHIDINGEDYHLNIPMYQDTKIPSDLQFDIVFLFTKAMQLESMLTHIQPHIHDTTIMVCTMNGLKHEERIVNYVDKSRIVRGVTTWTAGLESPGHTHLMGSGPVEIGSLVPEGQNNVEVIYNLLEQAKLNPHKSEDLQQSIWKKICVNGTANALCTILECRLSTLNESEYARKLVYDITKEIVEVATVDGVHLNADEVYHYLVDLNDKVGPHFPSMYQDLINNNRRTEIDYINGAVARLGSEHHIDAPINQFVANMVHAKEEQRQAK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 131749 132681 . + . GCA_005502385.1_01737_mRNA GCA_005502385.1_01737 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKIAIAGSGALGSGFGAMLYRQGNDVTLIDGWEPQATAVKHEGLHIDINGEDYHLNIPMYQDTKIPSDLQFDIVFLFTKAMQLESMLTHIQPHIHDTTIMVCTMNGLKHEERIVNYVDKSRIVRGVTTWTAGLESPGHTHLMGSGPVEIGSLVPEGQNNVEVIYNLLEQAKLNPHKSEDLQQSIWKKICVNGTANALCTILECRLSTLNESEYARKLVYDITKEIVEVATVDGVHLNADEVYHYLVDLNDKVGPHFPSMYQDLINNNRRTEIDYINGAVARLGSEHHIDAPINQFVANMVHAKEEQRQAK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 131749 132681 . + 0 GCA_005502385.1_01737 GCA_005502385.1_01737_gene,GCA_005502385.1_01737_mRNA GCA_005502385.1_01737 2-dehydropantoate 2-reductase GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKIAIAGSGALGSGFGAMLYRQGNDVTLIDGWEPQATAVKHEGLHIDINGEDYHLNIPMYQDTKIPSDLQFDIVFLFTKAMQLESMLTHIQPHIHDTTIMVCTMNGLKHEERIVNYVDKSRIVRGVTTWTAGLESPGHTHLMGSGPVEIGSLVPEGQNNVEVIYNLLEQAKLNPHKSEDLQQSIWKKICVNGTANALCTILECRLSTLNESEYARKLVYDITKEIVEVATVDGVHLNADEVYHYLVDLNDKVGPHFPSMYQDLINNNRRTEIDYINGAVARLGSEHHIDAPINQFVANMVHAKEEQRQAK persistent 310 2-dehydropantoate 2-reductase WP_048678842.1 UPI000660F243 UniRef100_UPI000660F243,UniRef50_A0A0U1EBN6,UniRef90_A0A4Q9WP56 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 132782 133255 . + . GCA_005502385.1_01738_gene GCA_005502385.1_01738 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKQSTKRVIMTGVIGGLLSGAVKMGWEALIPPRTPQREEEPPPMTLLHKLNLPDNVKHATYRYNENDIPITVMGIHYGFSIANAMVYGLLAEKCPKVATLRGTFFGILIHIAFHEYILPKLNLTPQVKDLPKEERISELLGHIVWMNTIDLIRNSHR . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 132782 133255 . + . GCA_005502385.1_01738_mRNA GCA_005502385.1_01738 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKQSTKRVIMTGVIGGLLSGAVKMGWEALIPPRTPQREEEPPPMTLLHKLNLPDNVKHATYRYNENDIPITVMGIHYGFSIANAMVYGLLAEKCPKVATLRGTFFGILIHIAFHEYILPKLNLTPQVKDLPKEERISELLGHIVWMNTIDLIRNSHR . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 132782 133255 . + 0 GCA_005502385.1_01738 GCA_005502385.1_01738_gene,GCA_005502385.1_01738_mRNA GCA_005502385.1_01738 Inner membrane protein YagU GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKQSTKRVIMTGVIGGLLSGAVKMGWEALIPPRTPQREEEPPPMTLLHKLNLPDNVKHATYRYNENDIPITVMGIHYGFSIANAMVYGLLAEKCPKVATLRGTFFGILIHIAFHEYILPKLNLTPQVKDLPKEERISELLGHIVWMNTIDLIRNSHR persistent 157 DUF1440 domain-containing protein WP_017174988.1 UPI00030D84A3 UniRef100_A0A4Q9WR69,UniRef50_G5JKH0,UniRef90_A0AAE5MZJ8 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 133312 134154 . - . GCA_005502385.1_01739_gene GCA_005502385.1_01739 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKKWFLLPMALIMLAGCDYSHKEEQHGLFYTVFVKPMDALLHFLGHTFNENYGLAIIVIVFILRLILMPLMCIQVKNIHVIRGKTDVVKPEINKIQEKIKEAQSPEERRAANKLLMKKYNEYGINPFKNLIGTFPILIQIPILLGLYTSIKYPTSGGITQHPHFLWFNLMHTDIIMTIIAAVMYFIQPLVNSIHYPKNERRSYYVMMVLSPLFITYASLHSASALSVYWAISATFLIIQMHFAHSHYAKVGKIEGEKLRQRIETKRQTTSETSSSTSNH . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 133312 134154 . - . GCA_005502385.1_01739_mRNA GCA_005502385.1_01739 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKKWFLLPMALIMLAGCDYSHKEEQHGLFYTVFVKPMDALLHFLGHTFNENYGLAIIVIVFILRLILMPLMCIQVKNIHVIRGKTDVVKPEINKIQEKIKEAQSPEERRAANKLLMKKYNEYGINPFKNLIGTFPILIQIPILLGLYTSIKYPTSGGITQHPHFLWFNLMHTDIIMTIIAAVMYFIQPLVNSIHYPKNERRSYYVMMVLSPLFITYASLHSASALSVYWAISATFLIIQMHFAHSHYAKVGKIEGEKLRQRIETKRQTTSETSSSTSNH . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 133312 134154 . - 0 GCA_005502385.1_01739 GCA_005502385.1_01739_gene,GCA_005502385.1_01739_mRNA GCA_005502385.1_01739 Membrane protein insertase YidC GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MKKKWFLLPMALIMLAGCDYSHKEEQHGLFYTVFVKPMDALLHFLGHTFNENYGLAIIVIVFILRLILMPLMCIQVKNIHVIRGKTDVVKPEINKIQEKIKEAQSPEERRAANKLLMKKYNEYGINPFKNLIGTFPILIQIPILLGLYTSIKYPTSGGITQHPHFLWFNLMHTDIIMTIIAAVMYFIQPLVNSIHYPKNERRSYYVMMVLSPLFITYASLHSASALSVYWAISATFLIIQMHFAHSHYAKVGKIEGEKLRQRIETKRQTTSETSSSTSNH persistent 280 Membrane insertase YidC/Oxa/ALB C-terminal domain-containing protein WP_048678844.1 UPI0006603171 UniRef100_UPI0006603171,UniRef50_Q5HLG6,UniRef90_A0A974KZ65 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 134252 135745 . - . GCA_005502385.1_01740_gene GCA_005502385.1_01740 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MRKNFIMLGMILLVGIIILSIAIKLKPSYSMFSPSSQSYIDNMIVNKMKDDHIPGMSILIVKNNKTILNKGYGFSNIKKKSKVTPNTRFEIASNTKAFTGYAIMQLVEAHKINLNDKVSHYIPGFYMKYNHKKVDITVDQLIAQTSGISGDITNDDKITKDTNSLEGLVYSIKGRNLDAKPGKQFEYSNMNYDILGLIVQKASHQSYATYLSTHLFTPLHMTQSTVKESNMKKNNDAQGYVIKKGKAYADSPEFNLGDNPAAYMMTNTKDLASWLKFQLNPPKKVASLVQLTHQPKVKAIDNSQEVHYATGWFIDDNHSETIVYHPGTLENYSSYIILNPKKDYGIVVLANSYSKNVAELAQHLNTQMSNGQHIKTLQYLINQWNILFIIITIILLIAVASVFLIIYRLIFKFKSIHFKTMSRGLLIKISMMLLTFTLILAILHLLPTLLLSNSDWRFMMSWLPLQAKITLFSFVLLLTSLWSYFILNIITRSKRPI . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 134252 135745 . - . GCA_005502385.1_01740_mRNA GCA_005502385.1_01740 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MRKNFIMLGMILLVGIIILSIAIKLKPSYSMFSPSSQSYIDNMIVNKMKDDHIPGMSILIVKNNKTILNKGYGFSNIKKKSKVTPNTRFEIASNTKAFTGYAIMQLVEAHKINLNDKVSHYIPGFYMKYNHKKVDITVDQLIAQTSGISGDITNDDKITKDTNSLEGLVYSIKGRNLDAKPGKQFEYSNMNYDILGLIVQKASHQSYATYLSTHLFTPLHMTQSTVKESNMKKNNDAQGYVIKKGKAYADSPEFNLGDNPAAYMMTNTKDLASWLKFQLNPPKKVASLVQLTHQPKVKAIDNSQEVHYATGWFIDDNHSETIVYHPGTLENYSSYIILNPKKDYGIVVLANSYSKNVAELAQHLNTQMSNGQHIKTLQYLINQWNILFIIITIILLIAVASVFLIIYRLIFKFKSIHFKTMSRGLLIKISMMLLTFTLILAILHLLPTLLLSNSDWRFMMSWLPLQAKITLFSFVLLLTSLWSYFILNIITRSKRPI . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 134252 135745 . - 0 GCA_005502385.1_01740 GCA_005502385.1_01740_gene,GCA_005502385.1_01740_mRNA GCA_005502385.1_01740 Protein flp GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MRKNFIMLGMILLVGIIILSIAIKLKPSYSMFSPSSQSYIDNMIVNKMKDDHIPGMSILIVKNNKTILNKGYGFSNIKKKSKVTPNTRFEIASNTKAFTGYAIMQLVEAHKINLNDKVSHYIPGFYMKYNHKKVDITVDQLIAQTSGISGDITNDDKITKDTNSLEGLVYSIKGRNLDAKPGKQFEYSNMNYDILGLIVQKASHQSYATYLSTHLFTPLHMTQSTVKESNMKKNNDAQGYVIKKGKAYADSPEFNLGDNPAAYMMTNTKDLASWLKFQLNPPKKVASLVQLTHQPKVKAIDNSQEVHYATGWFIDDNHSETIVYHPGTLENYSSYIILNPKKDYGIVVLANSYSKNVAELAQHLNTQMSNGQHIKTLQYLINQWNILFIIITIILLIAVASVFLIIYRLIFKFKSIHFKTMSRGLLIKISMMLLTFTLILAILHLLPTLLLSNSDWRFMMSWLPLQAKITLFSFVLLLTSLWSYFILNIITRSKRPI persistent 497 Serine hydrolase WP_049416290.1 UPI00066A70F3 UniRef100_UPI00066A70F3,UniRef50_A0A853V0Q8,UniRef90_A0A3S7GWK0 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 136018 137844 . + . GCA_005502385.1_01741_gene GCA_005502385.1_01741 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MFTQFKRLIIGKPKKNRDLKNEKISNFKALAILSSDALSSVAYGPEQILITLSMVGAIASWYTLPIAAAVLVLLAALILSYRQIIYAYPKGGGAYMVSKTNLGEKWGLLAGGSLLVDYILTVAVSISSGADAFVAAFPGLYHHKVFIACLLVLFILIMNLRGLTESATVLSYPVYLFIIGLIVMIVIGTWKVATGQAEPHMQATVGTAVPGVTLFLLLKAFSSGASSLTGVEAISNAVTNFKDPGSKNAVKTLITMGMILAFLLVGIVGLAYWYGIMPQTETTVLSQLAMNILGHNVGYYFVQVTTVMILVLAANTGFTAFPMLAASMSKDKYMPRMFNVRGDRLGYSNSIITLGICAMLLIIFFHGKTENLIPLYAVGVFIPFTLAQYGMVLKWIRGREKGWSTKLIANAIGGTITFIVFMIFLITKFNQVWPILIFLPIVVYIFTRINRHYKDIAEQLSTTKIVQDMPVVDKNLAIVPVNTITTALNKSIYYAHMIADDVIAVHVSFGDQTDNLFIEKWNKQYPDIRLVTLHSEYRSVIRPISRFIDKINKKANDQNYVITVVVTEFIPKKPWHNFLHNQTSLRLKMHLFYQKNVILATVPYKLQK . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 136018 137844 . + . GCA_005502385.1_01741_mRNA GCA_005502385.1_01741 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MFTQFKRLIIGKPKKNRDLKNEKISNFKALAILSSDALSSVAYGPEQILITLSMVGAIASWYTLPIAAAVLVLLAALILSYRQIIYAYPKGGGAYMVSKTNLGEKWGLLAGGSLLVDYILTVAVSISSGADAFVAAFPGLYHHKVFIACLLVLFILIMNLRGLTESATVLSYPVYLFIIGLIVMIVIGTWKVATGQAEPHMQATVGTAVPGVTLFLLLKAFSSGASSLTGVEAISNAVTNFKDPGSKNAVKTLITMGMILAFLLVGIVGLAYWYGIMPQTETTVLSQLAMNILGHNVGYYFVQVTTVMILVLAANTGFTAFPMLAASMSKDKYMPRMFNVRGDRLGYSNSIITLGICAMLLIIFFHGKTENLIPLYAVGVFIPFTLAQYGMVLKWIRGREKGWSTKLIANAIGGTITFIVFMIFLITKFNQVWPILIFLPIVVYIFTRINRHYKDIAEQLSTTKIVQDMPVVDKNLAIVPVNTITTALNKSIYYAHMIADDVIAVHVSFGDQTDNLFIEKWNKQYPDIRLVTLHSEYRSVIRPISRFIDKINKKANDQNYVITVVVTEFIPKKPWHNFLHNQTSLRLKMHLFYQKNVILATVPYKLQK . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 136018 137844 . + 0 GCA_005502385.1_01741 GCA_005502385.1_01741_gene,GCA_005502385.1_01741_mRNA GCA_005502385.1_01741 Potassium transporter KimA GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MFTQFKRLIIGKPKKNRDLKNEKISNFKALAILSSDALSSVAYGPEQILITLSMVGAIASWYTLPIAAAVLVLLAALILSYRQIIYAYPKGGGAYMVSKTNLGEKWGLLAGGSLLVDYILTVAVSISSGADAFVAAFPGLYHHKVFIACLLVLFILIMNLRGLTESATVLSYPVYLFIIGLIVMIVIGTWKVATGQAEPHMQATVGTAVPGVTLFLLLKAFSSGASSLTGVEAISNAVTNFKDPGSKNAVKTLITMGMILAFLLVGIVGLAYWYGIMPQTETTVLSQLAMNILGHNVGYYFVQVTTVMILVLAANTGFTAFPMLAASMSKDKYMPRMFNVRGDRLGYSNSIITLGICAMLLIIFFHGKTENLIPLYAVGVFIPFTLAQYGMVLKWIRGREKGWSTKLIANAIGGTITFIVFMIFLITKFNQVWPILIFLPIVVYIFTRINRHYKDIAEQLSTTKIVQDMPVVDKNLAIVPVNTITTALNKSIYYAHMIADDVIAVHVSFGDQTDNLFIEKWNKQYPDIRLVTLHSEYRSVIRPISRFIDKINKKANDQNYVITVVVTEFIPKKPWHNFLHNQTSLRLKMHLFYQKNVILATVPYKLQK persistent 608 APC family permease UniRef50_P96589,UniRef90_A0A974KZD4 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 137898 139994 . - . GCA_005502385.1_01742_gene GCA_005502385.1_01742 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MELLEAFLLFILAVIISSIIYHRFPNIPTAFIQIALGVALFIFPIPLHFKFEPEVFMMAVIAPLLFVEGTHVSREKLLEYRKPVVLMAMGLVFTTVIGVGFFIHWIWPNLPMPAAFAIAAILCPTDAVAVSAITKGKVLPKGSMAILEGESLLNDAAGIISFKIAVTALVTGSFSAMNAIGQFLLSTFLGILVGAIIGALVVSLRVYLTSNKGLKDSNTLTFIQLLTPFVIYFIAEEVHASGIIAVVVAGLIHGLERDRLIRAQTELQMNYNQIWNTLSYALNGFVFVVLGYIVPEVILEIVRNEPQNLVFLIVVAFLIAFAIYIFRFIWVYVWFKDFYYPKNVEAYLDEEEETQPPKRSRYAFIMTLCGIHGTISLSMALTLPFIINGNQNFDHRNDLLFIASMMVLISLIFAQMILPFITPSEQQSHFKGMSYQSAKIFMIQHVIRTLKEKADTHKDIDYRPILNQYFNELSFLIDMESDDKNTKELHRLRDIAEDVETETLQQLIKQERITKKDLSDYRKVMELTQSFREMSFIEKLNRFSKLIILRFKARKDSRKSVNQSSFEQQRYTDRKELRHNFKKVQHIIRIVNRQVTLRLQEEQNSTNVLEVSLIINQYYALSRKLRQHHNRKRQREENKFMYELNTQQQYDAKLDALYTQRQILDELISRNKVTNEIAAQLRENINYNEIVLAKELNH . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 137898 139994 . - . GCA_005502385.1_01742_mRNA GCA_005502385.1_01742 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MELLEAFLLFILAVIISSIIYHRFPNIPTAFIQIALGVALFIFPIPLHFKFEPEVFMMAVIAPLLFVEGTHVSREKLLEYRKPVVLMAMGLVFTTVIGVGFFIHWIWPNLPMPAAFAIAAILCPTDAVAVSAITKGKVLPKGSMAILEGESLLNDAAGIISFKIAVTALVTGSFSAMNAIGQFLLSTFLGILVGAIIGALVVSLRVYLTSNKGLKDSNTLTFIQLLTPFVIYFIAEEVHASGIIAVVVAGLIHGLERDRLIRAQTELQMNYNQIWNTLSYALNGFVFVVLGYIVPEVILEIVRNEPQNLVFLIVVAFLIAFAIYIFRFIWVYVWFKDFYYPKNVEAYLDEEEETQPPKRSRYAFIMTLCGIHGTISLSMALTLPFIINGNQNFDHRNDLLFIASMMVLISLIFAQMILPFITPSEQQSHFKGMSYQSAKIFMIQHVIRTLKEKADTHKDIDYRPILNQYFNELSFLIDMESDDKNTKELHRLRDIAEDVETETLQQLIKQERITKKDLSDYRKVMELTQSFREMSFIEKLNRFSKLIILRFKARKDSRKSVNQSSFEQQRYTDRKELRHNFKKVQHIIRIVNRQVTLRLQEEQNSTNVLEVSLIINQYYALSRKLRQHHNRKRQREENKFMYELNTQQQYDAKLDALYTQRQILDELISRNKVTNEIAAQLRENINYNEIVLAKELNH . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 137898 139994 . - 0 GCA_005502385.1_01742 GCA_005502385.1_01742_gene,GCA_005502385.1_01742_mRNA GCA_005502385.1_01742 Sodium%2C potassium%2C lithium and rubidium/H(+) antiporter GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MELLEAFLLFILAVIISSIIYHRFPNIPTAFIQIALGVALFIFPIPLHFKFEPEVFMMAVIAPLLFVEGTHVSREKLLEYRKPVVLMAMGLVFTTVIGVGFFIHWIWPNLPMPAAFAIAAILCPTDAVAVSAITKGKVLPKGSMAILEGESLLNDAAGIISFKIAVTALVTGSFSAMNAIGQFLLSTFLGILVGAIIGALVVSLRVYLTSNKGLKDSNTLTFIQLLTPFVIYFIAEEVHASGIIAVVVAGLIHGLERDRLIRAQTELQMNYNQIWNTLSYALNGFVFVVLGYIVPEVILEIVRNEPQNLVFLIVVAFLIAFAIYIFRFIWVYVWFKDFYYPKNVEAYLDEEEETQPPKRSRYAFIMTLCGIHGTISLSMALTLPFIINGNQNFDHRNDLLFIASMMVLISLIFAQMILPFITPSEQQSHFKGMSYQSAKIFMIQHVIRTLKEKADTHKDIDYRPILNQYFNELSFLIDMESDDKNTKELHRLRDIAEDVETETLQQLIKQERITKKDLSDYRKVMELTQSFREMSFIEKLNRFSKLIILRFKARKDSRKSVNQSSFEQQRYTDRKELRHNFKKVQHIIRIVNRQVTLRLQEEQNSTNVLEVSLIINQYYALSRKLRQHHNRKRQREENKFMYELNTQQQYDAKLDALYTQRQILDELISRNKVTNEIAAQLRENINYNEIVLAKELNH persistent 698 Sodium:proton antiporter WP_070859819.1 UPI0008A95E93 UniRef100_UPI0008A95E93,UniRef50_Q2FVI0,UniRef90_A0A974QNF1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 140129 141529 . - . GCA_005502385.1_01743_gene GCA_005502385.1_01743 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MARQLERELSNRHIQLIAIGGAIGTGLFLGSGQTISLTGPSLLITYLIIGIVLFAFMRALGELLLSNTRFNSFVDIANEYLGPFGGFVIGWTYWLSWIVSSMSDLTAMGQYFSFWFPNVPHWLTVLFIVLLLISFNMLGAKLFGELEFWFSIIKIITIIAMIIVGLVMIFFSFKTSYGHASFSNLVNHGGIFPNGPAGFLMSFQIAVYSFIGIELIGVTAGETKDPRTVIPKAINNVPVRILLFYVGGLLVIMSVIPWNKIHPDASPFVMLFSMIGLPFAAGLVNFVVLTAAASATNSGIYSNSRILFGLSKQGLGPKMLSKTNHHSVPYLSMFVSSGTLLLAALLNFIFPDAIQLFIYVTTLSTVLFIVVWAMIIISYIIYVRKNPEEHKRNKFKLLGGKAMAYVILAFFLFVFVLLFFSADTRVAIFISPVWFIFLFLFYKKYKKNAEYLAEKTRQQPRESINH . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 140129 141529 . - . GCA_005502385.1_01743_mRNA GCA_005502385.1_01743 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MARQLERELSNRHIQLIAIGGAIGTGLFLGSGQTISLTGPSLLITYLIIGIVLFAFMRALGELLLSNTRFNSFVDIANEYLGPFGGFVIGWTYWLSWIVSSMSDLTAMGQYFSFWFPNVPHWLTVLFIVLLLISFNMLGAKLFGELEFWFSIIKIITIIAMIIVGLVMIFFSFKTSYGHASFSNLVNHGGIFPNGPAGFLMSFQIAVYSFIGIELIGVTAGETKDPRTVIPKAINNVPVRILLFYVGGLLVIMSVIPWNKIHPDASPFVMLFSMIGLPFAAGLVNFVVLTAAASATNSGIYSNSRILFGLSKQGLGPKMLSKTNHHSVPYLSMFVSSGTLLLAALLNFIFPDAIQLFIYVTTLSTVLFIVVWAMIIISYIIYVRKNPEEHKRNKFKLLGGKAMAYVILAFFLFVFVLLFFSADTRVAIFISPVWFIFLFLFYKKYKKNAEYLAEKTRQQPRESINH . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 140129 141529 . - 0 GCA_005502385.1_01743 GCA_005502385.1_01743_gene,GCA_005502385.1_01743_mRNA GCA_005502385.1_01743 D-serine/D-alanine/glycine transporter GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MARQLERELSNRHIQLIAIGGAIGTGLFLGSGQTISLTGPSLLITYLIIGIVLFAFMRALGELLLSNTRFNSFVDIANEYLGPFGGFVIGWTYWLSWIVSSMSDLTAMGQYFSFWFPNVPHWLTVLFIVLLLISFNMLGAKLFGELEFWFSIIKIITIIAMIIVGLVMIFFSFKTSYGHASFSNLVNHGGIFPNGPAGFLMSFQIAVYSFIGIELIGVTAGETKDPRTVIPKAINNVPVRILLFYVGGLLVIMSVIPWNKIHPDASPFVMLFSMIGLPFAAGLVNFVVLTAAASATNSGIYSNSRILFGLSKQGLGPKMLSKTNHHSVPYLSMFVSSGTLLLAALLNFIFPDAIQLFIYVTTLSTVLFIVVWAMIIISYIIYVRKNPEEHKRNKFKLLGGKAMAYVILAFFLFVFVLLFFSADTRVAIFISPVWFIFLFLFYKKYKKNAEYLAEKTRQQPRESINH persistent 466 Amino acid permease UniRef50_Q2FXN2,UniRef90_A0A4Z1C561 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 141836 142648 . + . GCA_005502385.1_01744_gene GCA_005502385.1_01744 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MRIGAISDLHIDRHPKLKSNVYLETLIKVVQHREIDLLLIAGDISNYFRDSYQFIKDLKTALHIPILFVPGNHDYWKAEDGTTSQDIYDFYRTKPECLLDHPYVINDNWAIVGHTAWYDYSYADKKFEETRLKKGKYYGATWQDKVKIDWDEDDTILSKKAAKHVKQELEQLQDKQIILMTHIVTHSKFVVPTPHRIFDFFNAFIGTSDFDRLYQQFPIKYSIMGHVHFRKSLVENNITFLCPCLGYKREWRTADIYSEMNHALIDFVIE . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 141836 142648 . + . GCA_005502385.1_01744_mRNA GCA_005502385.1_01744 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MRIGAISDLHIDRHPKLKSNVYLETLIKVVQHREIDLLLIAGDISNYFRDSYQFIKDLKTALHIPILFVPGNHDYWKAEDGTTSQDIYDFYRTKPECLLDHPYVINDNWAIVGHTAWYDYSYADKKFEETRLKKGKYYGATWQDKVKIDWDEDDTILSKKAAKHVKQELEQLQDKQIILMTHIVTHSKFVVPTPHRIFDFFNAFIGTSDFDRLYQQFPIKYSIMGHVHFRKSLVENNITFLCPCLGYKREWRTADIYSEMNHALIDFVIE . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 141836 142648 . + 0 GCA_005502385.1_01744 GCA_005502385.1_01744_gene,GCA_005502385.1_01744_mRNA GCA_005502385.1_01744 3'%2C5'-cyclic adenosine monophosphate phosphodiesterase CpdA GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MRIGAISDLHIDRHPKLKSNVYLETLIKVVQHREIDLLLIAGDISNYFRDSYQFIKDLKTALHIPILFVPGNHDYWKAEDGTTSQDIYDFYRTKPECLLDHPYVINDNWAIVGHTAWYDYSYADKKFEETRLKKGKYYGATWQDKVKIDWDEDDTILSKKAAKHVKQELEQLQDKQIILMTHIVTHSKFVVPTPHRIFDFFNAFIGTSDFDRLYQQFPIKYSIMGHVHFRKSLVENNITFLCPCLGYKREWRTADIYSEMNHALIDFVIE persistent 270 Phosphohydrolase WP_070468510.1 UPI0008A19FF2 UniRef100_UPI0008A19FF2,UniRef50_Q2FVI2,UniRef90_A0A974QNI9 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 142700 143311 . - . GCA_005502385.1_01745_gene GCA_005502385.1_01745 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNKKLLSVTPKSQLFPIPMIMGCEGVSAAMLLQYNHHNIKATDIMKHWPTHPNNPYKGYVGHHLLVKFGHHQTIFPSAYVPYLQTFDSRIVDGTGTNLEELETVIDQGQPILMYHTSLGQKPSRKTFKFDNHTRQLVSNIHVTLLIGYDDTHYYYIDPLWSHFLRKIIVPALVPNRFQIIKIKKEFMERSFNAPGKKCIYVKP . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 142700 143311 . - . GCA_005502385.1_01745_mRNA GCA_005502385.1_01745 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNKKLLSVTPKSQLFPIPMIMGCEGVSAAMLLQYNHHNIKATDIMKHWPTHPNNPYKGYVGHHLLVKFGHHQTIFPSAYVPYLQTFDSRIVDGTGTNLEELETVIDQGQPILMYHTSLGQKPSRKTFKFDNHTRQLVSNIHVTLLIGYDDTHYYYIDPLWSHFLRKIIVPALVPNRFQIIKIKKEFMERSFNAPGKKCIYVKP . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 142700 143311 . - 0 GCA_005502385.1_01745 GCA_005502385.1_01745_gene,GCA_005502385.1_01745_mRNA GCA_005502385.1_01745 hypothetical protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MNKKLLSVTPKSQLFPIPMIMGCEGVSAAMLLQYNHHNIKATDIMKHWPTHPNNPYKGYVGHHLLVKFGHHQTIFPSAYVPYLQTFDSRIVDGTGTNLEELETVIDQGQPILMYHTSLGQKPSRKTFKFDNHTRQLVSNIHVTLLIGYDDTHYYYIDPLWSHFLRKIIVPALVPNRFQIIKIKKEFMERSFNAPGKKCIYVKP persistent 203 Peptidase C39-like domain-containing protein WP_017174981.1 UPI00031AB60C UniRef100_A0A4Q9WQA3,UniRef50_Q2FVI3,UniRef90_A0A6N0I2A1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 143851 144516 . - . GCA_005502385.1_01746_gene GCA_005502385.1_01746 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MVTKDSIVANVVTDFPLSSDVFRKYGIDFCCGGNISIKNAVKNKKVNVDTIIEEINHLPVHSTGNINVKYLDVPSLIQYIQSRYHETMHEEFKNLSPYVTKIAKVHGPNHPYLLQLQELYRQYRDGMLEHMDKEDNHDFPLLIKIARGEQVKNAHQVIESLVEDHTQTGHLLEEMSDLTNQYQPPSEACNTWRLVYTRLEHLERETHEHVHLENHVLFNKF . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 143851 144516 . - . GCA_005502385.1_01746_mRNA GCA_005502385.1_01746 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MVTKDSIVANVVTDFPLSSDVFRKYGIDFCCGGNISIKNAVKNKKVNVDTIIEEINHLPVHSTGNINVKYLDVPSLIQYIQSRYHETMHEEFKNLSPYVTKIAKVHGPNHPYLLQLQELYRQYRDGMLEHMDKEDNHDFPLLIKIARGEQVKNAHQVIESLVEDHTQTGHLLEEMSDLTNQYQPPSEACNTWRLVYTRLEHLERETHEHVHLENHVLFNKF . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 143851 144516 . - 0 GCA_005502385.1_01746 GCA_005502385.1_01746_gene,GCA_005502385.1_01746_mRNA GCA_005502385.1_01746 Iron-sulfur cluster repair protein ScdA GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MVTKDSIVANVVTDFPLSSDVFRKYGIDFCCGGNISIKNAVKNKKVNVDTIIEEINHLPVHSTGNINVKYLDVPSLIQYIQSRYHETMHEEFKNLSPYVTKIAKVHGPNHPYLLQLQELYRQYRDGMLEHMDKEDNHDFPLLIKIARGEQVKNAHQVIESLVEDHTQTGHLLEEMSDLTNQYQPPSEACNTWRLVYTRLEHLERETHEHVHLENHVLFNKF shell 221 scdA iron-sulfur cluster repair di-iron protein ScdA WP_070436313.1 UPI0008A4C434 UniRef100_UPI0008A4C434,UniRef50_P72360,UniRef90_A0A3S7GZJ7 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 144742 145938 . - . GCA_005502385.1_01747_gene GCA_005502385.1_01747 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MHNSTHTKLPMLLLIVLGTMTAFGPMIIDMYLPALPAVQQQFNTSTSSIQLTLSFAMIGLALGQFIFGPLSDVFGRKKIALIILSVFVLASCGAIFITTFPLFLLIRLVQGLTAGGIIVIAKAFAGDYYQGNTLAKFLASLMVVNGIVTILMPLLGGLSLSLGSWRIIFVILTAISIIMLCGVTFNMPTTHHSEHVTANFKHIFSDFGRLLKRPRFIIPMFLQGLTYVMLFSFSSASPFITQKIYHMTPQQFSVMIAINGIGLIVVSQIVALLVERIHRFKILIYLTFIQLIGVLLVVFTLILQGPLWLLLVAFFLNVCPVTSIGPLGFSMAMEERTGGSGNASSLLGLFQFILGGLVSPLVGLKGQYNVMPYLTVIVITAILIVLLQFLYFKKYQRI . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 144742 145938 . - . GCA_005502385.1_01747_mRNA GCA_005502385.1_01747 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MHNSTHTKLPMLLLIVLGTMTAFGPMIIDMYLPALPAVQQQFNTSTSSIQLTLSFAMIGLALGQFIFGPLSDVFGRKKIALIILSVFVLASCGAIFITTFPLFLLIRLVQGLTAGGIIVIAKAFAGDYYQGNTLAKFLASLMVVNGIVTILMPLLGGLSLSLGSWRIIFVILTAISIIMLCGVTFNMPTTHHSEHVTANFKHIFSDFGRLLKRPRFIIPMFLQGLTYVMLFSFSSASPFITQKIYHMTPQQFSVMIAINGIGLIVVSQIVALLVERIHRFKILIYLTFIQLIGVLLVVFTLILQGPLWLLLVAFFLNVCPVTSIGPLGFSMAMEERTGGSGNASSLLGLFQFILGGLVSPLVGLKGQYNVMPYLTVIVITAILIVLLQFLYFKKYQRI . . . . . . . GCA_005502385.1|SCOV01000005.1 Prodigal:002006 CDS 144742 145938 . - 0 GCA_005502385.1_01747 GCA_005502385.1_01747_gene,GCA_005502385.1_01747_mRNA GCA_005502385.1_01747 Bicyclomycin resistance protein GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 MHNSTHTKLPMLLLIVLGTMTAFGPMIIDMYLPALPAVQQQFNTSTSSIQLTLSFAMIGLALGQFIFGPLSDVFGRKKIALIILSVFVLASCGAIFITTFPLFLLIRLVQGLTAGGIIVIAKAFAGDYYQGNTLAKFLASLMVVNGIVTILMPLLGGLSLSLGSWRIIFVILTAISIIMLCGVTFNMPTTHHSEHVTANFKHIFSDFGRLLKRPRFIIPMFLQGLTYVMLFSFSSASPFITQKIYHMTPQQFSVMIAINGIGLIVVSQIVALLVERIHRFKILIYLTFIQLIGVLLVVFTLILQGPLWLLLVAFFLNVCPVTSIGPLGFSMAMEERTGGSGNASSLLGLFQFILGGLVSPLVGLKGQYNVMPYLTVIVITAILIVLLQFLYFKKYQRI persistent 398 Bcr/CflA family efflux transporter WP_002488760.1 UPI00024E1A23 UniRef100_A0A4Q9WP45,UniRef50_Q2FVI5,UniRef90_A0A4Q9WP45 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka gene 146073 146249 . - . GCA_005502385.1_01748_gene GCA_005502385.1_01748 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 . . . . . . . GCA_005502385.1|SCOV01000005.1 prokka mRNA 146073 146249 . - . GCA_005502385.1_01748_mRNA GCA_005502385.1_01748 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 . . . . . . . GCA_005502385.1|SCOV01000005.1 Infernal:001001 misc_RNA 146073 146249 102.5 - . GCA_005502385.1_01748 GCA_005502385.1_01748_gene,GCA_005502385.1_01748_mRNA GCA_005502385.1_01748 tsr24 GCA_005502385.1 SCOV01000005.1 GCA_005502385.1|SCOV01000005.1 GCA_005502385.1_SCOV01000005.1 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 114 437 . - . GCA_005502385.1_01749_gene GCA_005502385.1_01749 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKNITTTEEFNSVIQSEQPVIVKFEAGWCPDCKAMDMWIDPIVDKYNDYKWYSVNRDELEDVASDNEVMGIPSLLIFENGQKHAHLHSANAKSPEQVESFLKETFNK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 114 437 . - . GCA_005502385.1_01749_mRNA GCA_005502385.1_01749 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKNITTTEEFNSVIQSEQPVIVKFEAGWCPDCKAMDMWIDPIVDKYNDYKWYSVNRDELEDVASDNEVMGIPSLLIFENGQKHAHLHSANAKSPEQVESFLKETFNK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 114 437 . - 0 GCA_005502385.1_01749 GCA_005502385.1_01749_gene,GCA_005502385.1_01749_mRNA GCA_005502385.1_01749 Thioredoxin-like protein YdbP GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKNITTTEEFNSVIQSEQPVIVKFEAGWCPDCKAMDMWIDPIVDKYNDYKWYSVNRDELEDVASDNEVMGIPSLLIFENGQKHAHLHSANAKSPEQVESFLKETFNK persistent 107 Thioredoxin WP_048682682.1 UPI0006615A08 UniRef100_A0A8I0W907,UniRef50_A0A0U1MGB8,UniRef90_A0A533J4E4 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 577 930 . + . GCA_005502385.1_01750_gene GCA_005502385.1_01750 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIKFYQYPKCTTCKKAARFLDEHGVSYESIDIVQHTPTKQEFKELVVKSEVEINKFFNTHGVKYRELGLKDKLNELSNDEKLELLATDGMLVKRPLAVSGEKVTLGFNEEQYKDVWL . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 577 930 . + . GCA_005502385.1_01750_mRNA GCA_005502385.1_01750 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIKFYQYPKCTTCKKAARFLDEHGVSYESIDIVQHTPTKQEFKELVVKSEVEINKFFNTHGVKYRELGLKDKLNELSNDEKLELLATDGMLVKRPLAVSGEKVTLGFNEEQYKDVWL . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 577 930 . + 0 GCA_005502385.1_01750 GCA_005502385.1_01750_gene,GCA_005502385.1_01750_mRNA GCA_005502385.1_01750 Regulatory protein MgsR GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIKFYQYPKCTTCKKAARFLDEHGVSYESIDIVQHTPTKQEFKELVVKSEVEINKFFNTHGVKYRELGLKDKLNELSNDEKLELLATDGMLVKRPLAVSGEKVTLGFNEEQYKDVWL persistent 117 Arsenate reductase family protein WP_109288800.1 UPI000D64BA85 UniRef100_UPI000D64BA85,UniRef50_A0A1D4Q7A2,UniRef90_A0A6B8S6Z9 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 1023 1403 . + . GCA_005502385.1_01751_gene GCA_005502385.1_01751 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAVPSEFKYSKEHEWVKVEGNTATIGITEYAQGELGDIVFVELPDVDDEINEGDTFGSVESVKTVSELYAPVSGKIVETNDELEDSPEFVNESPYEKAWMVKVELSDESQLDELLSAEQYSEMIGE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 1023 1403 . + . GCA_005502385.1_01751_mRNA GCA_005502385.1_01751 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAVPSEFKYSKEHEWVKVEGNTATIGITEYAQGELGDIVFVELPDVDDEINEGDTFGSVESVKTVSELYAPVSGKIVETNDELEDSPEFVNESPYEKAWMVKVELSDESQLDELLSAEQYSEMIGE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 1023 1403 . + 0 GCA_005502385.1_01751 GCA_005502385.1_01751_gene,GCA_005502385.1_01751_mRNA GCA_005502385.1_01751 Glycine cleavage system H protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAVPSEFKYSKEHEWVKVEGNTATIGITEYAQGELGDIVFVELPDVDDEINEGDTFGSVESVKTVSELYAPVSGKIVETNDELEDSPEFVNESPYEKAWMVKVELSDESQLDELLSAEQYSEMIGE persistent 126 gcvH glycine cleavage system protein GcvH GO:0005829,GO:0005960,GO:0019464 COG0509,E WP_017175879.1 UPI0002F27D03 UniRef100_A0A3S7GXB9,UniRef50_O32174,UniRef90_Q49W45 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 1540 1926 . + . GCA_005502385.1_01752_gene GCA_005502385.1_01752 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAILNKVIIVEGKSDKKKVQQVIAEPVNIICTHGTMSIDKLDDMIETLYGKQVYILADSDDEGEKIRKWFKRYLSESEHIYVDKTYCEVARCPKNYLAHVLSKYGFNVKKEKKLIPNLSSERLVLVNE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 1540 1926 . + . GCA_005502385.1_01752_mRNA GCA_005502385.1_01752 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAILNKVIIVEGKSDKKKVQQVIAEPVNIICTHGTMSIDKLDDMIETLYGKQVYILADSDDEGEKIRKWFKRYLSESEHIYVDKTYCEVARCPKNYLAHVLSKYGFNVKKEKKLIPNLSSERLVLVNE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 1540 1926 . + 0 GCA_005502385.1_01752 GCA_005502385.1_01752_gene,GCA_005502385.1_01752_mRNA GCA_005502385.1_01752 Ribonuclease M5 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAILNKVIIVEGKSDKKKVQQVIAEPVNIICTHGTMSIDKLDDMIETLYGKQVYILADSDDEGEKIRKWFKRYLSESEHIYVDKTYCEVARCPKNYLAHVLSKYGFNVKKEKKLIPNLSSERLVLVNE persistent 128 Topiosmerase WP_002448075.1 UPI00019FC5E4 UniRef100_A0A4V2KY01,UniRef50_A0A1E5LDX5,UniRef90_A0A4V2KY01 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 1919 2218 . + . GCA_005502385.1_01753_gene GCA_005502385.1_01753 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNNSIKIEDIKEHFDKDKHLIFGYTPMCGTCKISERMLDIANDIEQLPLKKIDLNFHKYFSEEYKIMSVPVLLIMDKDKEVDRIYAFQSVPYLLEKLKK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 1919 2218 . + . GCA_005502385.1_01753_mRNA GCA_005502385.1_01753 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNNSIKIEDIKEHFDKDKHLIFGYTPMCGTCKISERMLDIANDIEQLPLKKIDLNFHKYFSEEYKIMSVPVLLIMDKDKEVDRIYAFQSVPYLLEKLKK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 1919 2218 . + 0 GCA_005502385.1_01753 GCA_005502385.1_01753_gene,GCA_005502385.1_01753_mRNA GCA_005502385.1_01753 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNNSIKIEDIKEHFDKDKHLIFGYTPMCGTCKISERMLDIANDIEQLPLKKIDLNFHKYFSEEYKIMSVPVLLIMDKDKEVDRIYAFQSVPYLLEKLKK persistent 99 Thioredoxin family protein WP_002448091.1 UPI00019FC5E5 UniRef100_A0A1L8Y580,UniRef50_Q2FZZ3,UniRef90_A0A1L8Y580 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 2273 2377 . + . GCA_005502385.1_01754_gene GCA_005502385.1_01754 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 2273 2377 . + . GCA_005502385.1_01754_mRNA GCA_005502385.1_01754 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 . . . . . . . GCA_005502385.1|SCOV01000006.1 Infernal:001001 misc_RNA 2273 2377 87.8 + . GCA_005502385.1_01754 GCA_005502385.1_01754_gene,GCA_005502385.1_01754_mRNA GCA_005502385.1_01754 SAM GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 2462 3487 . + . GCA_005502385.1_01755_gene GCA_005502385.1_01755 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIELNQVVKRYHTKNKDVLAVDHVDLNIESGSIFGVIGFSGAGKSTLIRMFNNLEEPTSGDIIIDGDNINKLSKSDLRKKRQKVSMIFQHFNLLWSRTVISNIMFPLEIAGVSRAEAKQRALELVELVGLKGREKAYPSELSGGQKQRVGIARALANDPNVLLCDEATSALDPQTTDEILDLLLKIKEERNLTIVIITHEMQVIRRICDEVAVMENGRVIEQGKVDEVFENPQHEVTKRFVKDDLDDDFEDSIKHLEPLNKDAYIVRLNFNGNNTTQPVVSDITRTQNIELNILEANIKNTRTGSVGFLIVHIPHISEDGFNTFVTELHKEHVNVEVIKHG . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 2462 3487 . + . GCA_005502385.1_01755_mRNA GCA_005502385.1_01755 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIELNQVVKRYHTKNKDVLAVDHVDLNIESGSIFGVIGFSGAGKSTLIRMFNNLEEPTSGDIIIDGDNINKLSKSDLRKKRQKVSMIFQHFNLLWSRTVISNIMFPLEIAGVSRAEAKQRALELVELVGLKGREKAYPSELSGGQKQRVGIARALANDPNVLLCDEATSALDPQTTDEILDLLLKIKEERNLTIVIITHEMQVIRRICDEVAVMENGRVIEQGKVDEVFENPQHEVTKRFVKDDLDDDFEDSIKHLEPLNKDAYIVRLNFNGNNTTQPVVSDITRTQNIELNILEANIKNTRTGSVGFLIVHIPHISEDGFNTFVTELHKEHVNVEVIKHG . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 2462 3487 . + 0 GCA_005502385.1_01755 GCA_005502385.1_01755_gene,GCA_005502385.1_01755_mRNA GCA_005502385.1_01755 Methionine import ATP-binding protein MetN 2 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIELNQVVKRYHTKNKDVLAVDHVDLNIESGSIFGVIGFSGAGKSTLIRMFNNLEEPTSGDIIIDGDNINKLSKSDLRKKRQKVSMIFQHFNLLWSRTVISNIMFPLEIAGVSRAEAKQRALELVELVGLKGREKAYPSELSGGQKQRVGIARALANDPNVLLCDEATSALDPQTTDEILDLLLKIKEERNLTIVIITHEMQVIRRICDEVAVMENGRVIEQGKVDEVFENPQHEVTKRFVKDDLDDDFEDSIKHLEPLNKDAYIVRLNFNGNNTTQPVVSDITRTQNIELNILEANIKNTRTGSVGFLIVHIPHISEDGFNTFVTELHKEHVNVEVIKHG persistent 341 Methionine ABC transporter ATP-binding protein WP_048680282.1 UPI000661592F UniRef100_UPI000661592F,UniRef50_Q99VG8,UniRef90_A0A974L234 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 3480 4175 . + . GCA_005502385.1_01756_gene GCA_005502385.1_01756 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDKSYGDIFHEMITMPNVQWPEVWQAIYETLYMTIVSTIFAFIFGLILGVLLFLSAKSDAPGAKIFYTVVSFIVNLFRAIPFIILILLLIPFTSVLLGTISGPTGALPALIIGAAPFYARLVEIAFKEIDKGVIEAAWSMGANTWTVVRKVLLPEAMPALVSGITVTAIALVGSTAIAGVIGAGGLGNLAYLTGFTRNQNDVILVSTVFILIIVFIIQFIGDWLTNKIDKR . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 3480 4175 . + . GCA_005502385.1_01756_mRNA GCA_005502385.1_01756 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDKSYGDIFHEMITMPNVQWPEVWQAIYETLYMTIVSTIFAFIFGLILGVLLFLSAKSDAPGAKIFYTVVSFIVNLFRAIPFIILILLLIPFTSVLLGTISGPTGALPALIIGAAPFYARLVEIAFKEIDKGVIEAAWSMGANTWTVVRKVLLPEAMPALVSGITVTAIALVGSTAIAGVIGAGGLGNLAYLTGFTRNQNDVILVSTVFILIIVFIIQFIGDWLTNKIDKR . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 3480 4175 . + 0 GCA_005502385.1_01756 GCA_005502385.1_01756_gene,GCA_005502385.1_01756_mRNA GCA_005502385.1_01756 Methionine import system permease protein MetP GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDKSYGDIFHEMITMPNVQWPEVWQAIYETLYMTIVSTIFAFIFGLILGVLLFLSAKSDAPGAKIFYTVVSFIVNLFRAIPFIILILLLIPFTSVLLGTISGPTGALPALIIGAAPFYARLVEIAFKEIDKGVIEAAWSMGANTWTVVRKVLLPEAMPALVSGITVTAIALVGSTAIAGVIGAGGLGNLAYLTGFTRNQNDVILVSTVFILIIVFIIQFIGDWLTNKIDKR persistent 231 metP ABC transmembrane type-1 domain-containing protein COG2011,E WP_002448101.1 UPI00019FC5E7 UniRef100_A0A549UP01,UniRef50_O32168,UniRef90_A0A0H2VF95 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 4196 5011 . + . GCA_005502385.1_01757_gene GCA_005502385.1_01757 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKKLLSLVLVLTLTVVLAACGKGGDEKDKKIVVGASPAPHAEILEKAKPLLEKKGYDLEIKTINDYTTPNKLLDKGELDANYFQHVPYLKTESKEKGYKIEDAGKVHLEPMAVYSKKYKSLKDLPKGATVYVSNNPAEQGRFLKFFVDEGLIKIKKGVKIEDAKFEDITENKKDIKFNNKQSAEYLPKIYQNQDVDAAIINSNYAIDQGLSPQKDSIVVEKPNNNPYANLIAVRKDHKDDEKIKALVEVLQSKDIRDFINEKYKGAVVPAK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 4196 5011 . + . GCA_005502385.1_01757_mRNA GCA_005502385.1_01757 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKKLLSLVLVLTLTVVLAACGKGGDEKDKKIVVGASPAPHAEILEKAKPLLEKKGYDLEIKTINDYTTPNKLLDKGELDANYFQHVPYLKTESKEKGYKIEDAGKVHLEPMAVYSKKYKSLKDLPKGATVYVSNNPAEQGRFLKFFVDEGLIKIKKGVKIEDAKFEDITENKKDIKFNNKQSAEYLPKIYQNQDVDAAIINSNYAIDQGLSPQKDSIVVEKPNNNPYANLIAVRKDHKDDEKIKALVEVLQSKDIRDFINEKYKGAVVPAK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 4196 5011 . + 0 GCA_005502385.1_01757 GCA_005502385.1_01757_gene,GCA_005502385.1_01757_mRNA GCA_005502385.1_01757 Methionine-binding lipoprotein MetQ GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKKLLSLVLVLTLTVVLAACGKGGDEKDKKIVVGASPAPHAEILEKAKPLLEKKGYDLEIKTINDYTTPNKLLDKGELDANYFQHVPYLKTESKEKGYKIEDAGKVHLEPMAVYSKKYKSLKDLPKGATVYVSNNPAEQGRFLKFFVDEGLIKIKKGVKIEDAKFEDITENKKDIKFNNKQSAEYLPKIYQNQDVDAAIINSNYAIDQGLSPQKDSIVVEKPNNNPYANLIAVRKDHKDDEKIKALVEVLQSKDIRDFINEKYKGAVVPAK persistent 271 nlpA Lipoprotein COG1464,P WP_049382066.1 UPI00066A6817 UniRef100_A0A974L1N4,UniRef50_A0A380G8D6,UniRef90_A0A2A1K9D0 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 5102 5266 . - . GCA_005502385.1_01758_gene GCA_005502385.1_01758 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTFVNFTAMTEKGLNKKVNAFLEEHPYIEIVKFEYAMGQGGIGVGILYQDDSSL . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 5102 5266 . - . GCA_005502385.1_01758_mRNA GCA_005502385.1_01758 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTFVNFTAMTEKGLNKKVNAFLEEHPYIEIVKFEYAMGQGGIGVGILYQDDSSL . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 5102 5266 . - 0 GCA_005502385.1_01758 GCA_005502385.1_01758_gene,GCA_005502385.1_01758_mRNA GCA_005502385.1_01758 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTFVNFTAMTEKGLNKKVNAFLEEHPYIEIVKFEYAMGQGGIGVGILYQDDSSL persistent 54 degV DegV family protein WP_002448129.1 UPI00019FC5E9 UniRef100_A0A8X8GHW8,UniRef50_A0A7X9WD63,UniRef90_A0A8X8GHW8 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 5442 5627 . + . GCA_005502385.1_01759_gene GCA_005502385.1_01759 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAEDKFEQAKGNIKETVGNATDNKDLEKEGQGDKASGKAKEVVDNVKDKANDVIDKLKGDK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 5442 5627 . + . GCA_005502385.1_01759_mRNA GCA_005502385.1_01759 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAEDKFEQAKGNIKETVGNATDNKDLEKEGQGDKASGKAKEVVDNVKDKANDVIDKLKGDK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 5442 5627 . + 0 GCA_005502385.1_01759 GCA_005502385.1_01759_gene,GCA_005502385.1_01759_mRNA GCA_005502385.1_01759 hypothetical protein UPF0337 protein SA0772 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAEDKFEQAKGNIKETVGNATDNKDLEKEGQGDKASGKAKEVVDNVKDKANDVIDKLKGDK persistent 61 CsbD-like domain-containing protein WP_002448111.1 UPI00019FC5EA UniRef100_A0A1L8Y533,UniRef50_Q2FZY9,UniRef90_A0AAE5JKH4 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 5691 6548 . - . GCA_005502385.1_01760_gene GCA_005502385.1_01760 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTFKWKNILKGFAMGTSDLVPGISGGTIALLLGIYDDFISSISGLFSKRFWPSLKFLLPILIGMILAIGVLSNLIHYLLDHHHVITMFFFTGLIIGIVPYLLKTSDFKKTFTTKHYGLLILGIIVIVALTILNPSTQQSSLTLQLSFSLIIKYFIAGVCASSAMLLPGISGSFMLLVFGAYGTIMLAIANLAKFNFTGLPILIVVGLGILCGFLFSSRIIKYFLTHHFIGTFALITGFVIGSIYAVFPGIPKSPVEWIVSIISLVIGYIVSYSLGLITSNNDTQT . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 5691 6548 . - . GCA_005502385.1_01760_mRNA GCA_005502385.1_01760 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTFKWKNILKGFAMGTSDLVPGISGGTIALLLGIYDDFISSISGLFSKRFWPSLKFLLPILIGMILAIGVLSNLIHYLLDHHHVITMFFFTGLIIGIVPYLLKTSDFKKTFTTKHYGLLILGIIVIVALTILNPSTQQSSLTLQLSFSLIIKYFIAGVCASSAMLLPGISGSFMLLVFGAYGTIMLAIANLAKFNFTGLPILIVVGLGILCGFLFSSRIIKYFLTHHFIGTFALITGFVIGSIYAVFPGIPKSPVEWIVSIISLVIGYIVSYSLGLITSNNDTQT . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 5691 6548 . - 0 GCA_005502385.1_01760 GCA_005502385.1_01760_gene,GCA_005502385.1_01760_mRNA GCA_005502385.1_01760 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTFKWKNILKGFAMGTSDLVPGISGGTIALLLGIYDDFISSISGLFSKRFWPSLKFLLPILIGMILAIGVLSNLIHYLLDHHHVITMFFFTGLIIGIVPYLLKTSDFKKTFTTKHYGLLILGIIVIVALTILNPSTQQSSLTLQLSFSLIIKYFIAGVCASSAMLLPGISGSFMLLVFGAYGTIMLAIANLAKFNFTGLPILIVVGLGILCGFLFSSRIIKYFLTHHFIGTFALITGFVIGSIYAVFPGIPKSPVEWIVSIISLVIGYIVSYSLGLITSNNDTQT persistent 285 DUF368 domain-containing protein WP_019835074.1 UPI00036461BD UniRef100_UPI00036461BD,UniRef50_Q2FZY8,UniRef90_A0A6B8SDQ7 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 6876 7637 . + . GCA_005502385.1_01761_gene GCA_005502385.1_01761 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSSTLEIKDLHVSIEDKEILKGVNLTINTGEVHAIMGPNGTGKSTLSSAIMGHPSYEVTQGEVLLDGVNILELEVDERAKAGLFLAMQYPSEITGVTNADFMRSAINAKREEGQEINLMQFIKKLDKQMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQLMMLEPKFAILDEIDSGLDIDALKVVSKGINEMRGEDFGALMITHYQRLLNYITPDKVHVMYGGKVVKSGGPELAKRLEEEGYEWVKEEFGATE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 6876 7637 . + . GCA_005502385.1_01761_mRNA GCA_005502385.1_01761 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSSTLEIKDLHVSIEDKEILKGVNLTINTGEVHAIMGPNGTGKSTLSSAIMGHPSYEVTQGEVLLDGVNILELEVDERAKAGLFLAMQYPSEITGVTNADFMRSAINAKREEGQEINLMQFIKKLDKQMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQLMMLEPKFAILDEIDSGLDIDALKVVSKGINEMRGEDFGALMITHYQRLLNYITPDKVHVMYGGKVVKSGGPELAKRLEEEGYEWVKEEFGATE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 6876 7637 . + 0 GCA_005502385.1_01761 GCA_005502385.1_01761_gene,GCA_005502385.1_01761_mRNA GCA_005502385.1_01761 Vegetative protein 296 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSSTLEIKDLHVSIEDKEILKGVNLTINTGEVHAIMGPNGTGKSTLSSAIMGHPSYEVTQGEVLLDGVNILELEVDERAKAGLFLAMQYPSEITGVTNADFMRSAINAKREEGQEINLMQFIKKLDKQMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQLMMLEPKFAILDEIDSGLDIDALKVVSKGINEMRGEDFGALMITHYQRLLNYITPDKVHVMYGGKVVKSGGPELAKRLEEEGYEWVKEEFGATE persistent 253 sufC Fe-S cluster assembly ATPase SufC GO:0005524,GO:0016226 WP_002448050.1 UPI00019FC5EC UniRef100_A0A8X8KI48,UniRef50_A0A1G4NXF9,UniRef90_A0A380HPN9 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 7760 9067 . + . GCA_005502385.1_01762_gene GCA_005502385.1_01762 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTTETLNISEAQLVDYSKAQNEPSWMTELRQKALKLTETLEMPKPDKTKLKKWDFDAFKQHHVESKSYNDVSELPESVKNIIDIENSKNLIIQHNNDLAFTQVSEQANHNNVIIEGLSKALQDHSELVEKYLMKDAVTVDEHRLTALHTALLNGGVFVYVPKNVVVEDPIQYVVLHDNENASLFNHAIIVTEESAEVTYVENYLSTASGEGNQVNIISEVIAGANSNITYGSVDYLDKGFTGHIIRRGVTAADASINWALGLMNEGSQIIDNTTNLIGDRSTSELKSVIVGTGDQKINLTSKIVQYGKETNGYILKHGVMRENASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISQKEAERLVIHGFLDPVVRELPIEDVKRQLREVIELKVNK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 7760 9067 . + . GCA_005502385.1_01762_mRNA GCA_005502385.1_01762 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTTETLNISEAQLVDYSKAQNEPSWMTELRQKALKLTETLEMPKPDKTKLKKWDFDAFKQHHVESKSYNDVSELPESVKNIIDIENSKNLIIQHNNDLAFTQVSEQANHNNVIIEGLSKALQDHSELVEKYLMKDAVTVDEHRLTALHTALLNGGVFVYVPKNVVVEDPIQYVVLHDNENASLFNHAIIVTEESAEVTYVENYLSTASGEGNQVNIISEVIAGANSNITYGSVDYLDKGFTGHIIRRGVTAADASINWALGLMNEGSQIIDNTTNLIGDRSTSELKSVIVGTGDQKINLTSKIVQYGKETNGYILKHGVMRENASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISQKEAERLVIHGFLDPVVRELPIEDVKRQLREVIELKVNK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 7760 9067 . + 0 GCA_005502385.1_01762 GCA_005502385.1_01762_gene,GCA_005502385.1_01762_mRNA GCA_005502385.1_01762 hypothetical protein UPF0051 protein SA0778 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTTETLNISEAQLVDYSKAQNEPSWMTELRQKALKLTETLEMPKPDKTKLKKWDFDAFKQHHVESKSYNDVSELPESVKNIIDIENSKNLIIQHNNDLAFTQVSEQANHNNVIIEGLSKALQDHSELVEKYLMKDAVTVDEHRLTALHTALLNGGVFVYVPKNVVVEDPIQYVVLHDNENASLFNHAIIVTEESAEVTYVENYLSTASGEGNQVNIISEVIAGANSNITYGSVDYLDKGFTGHIIRRGVTAADASINWALGLMNEGSQIIDNTTNLIGDRSTSELKSVIVGTGDQKINLTSKIVQYGKETNGYILKHGVMRENASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISQKEAERLVIHGFLDPVVRELPIEDVKRQLREVIELKVNK persistent 435 sufD Fe-S cluster assembly protein SufD GO:0016226 WP_017175874.1 UPI00030765B9 UniRef100_A0A3S7GTG0,UniRef50_O32165,UniRef90_A0A3S7GTG0 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 9107 10348 . + . GCA_005502385.1_01763_gene GCA_005502385.1_01763 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAETSLNIQEIIEDFPILNQKINGKRLAYLDSTATSQTPVQVLNVLDDYYKRYNSNVHRGVHTLGSLATDGYESARETVRRFINAKYFEEIIFTRGTTASINIVAHSYGDANINEGDEIVVTEMEHHANIVPWQQLAKRKKATLKFIPMTDDGELRIEDVKSTINDNTKIVAITHVSNVLGTINDIKAIAKIAHEHGAIISVDGAQSAPHMDIDVQDLDVDFFSFSGHKMLGPTGIGVLYGKRELLQNMEPVEYGGDMIDFVSKYDATWADLPTKFEAGTPIIAQAIGLAEAIRYIENIGFDAIHQHEKELTEYAYEQLSSIEGLEIYGPPKERRAGVITFNLADIHPHDVATAVDTEGVAVRAGHHCAQPLMKWLNVSSTARASFYIYNTKEDVDQLVEALKQTKEFFSYEF . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 9107 10348 . + . GCA_005502385.1_01763_mRNA GCA_005502385.1_01763 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAETSLNIQEIIEDFPILNQKINGKRLAYLDSTATSQTPVQVLNVLDDYYKRYNSNVHRGVHTLGSLATDGYESARETVRRFINAKYFEEIIFTRGTTASINIVAHSYGDANINEGDEIVVTEMEHHANIVPWQQLAKRKKATLKFIPMTDDGELRIEDVKSTINDNTKIVAITHVSNVLGTINDIKAIAKIAHEHGAIISVDGAQSAPHMDIDVQDLDVDFFSFSGHKMLGPTGIGVLYGKRELLQNMEPVEYGGDMIDFVSKYDATWADLPTKFEAGTPIIAQAIGLAEAIRYIENIGFDAIHQHEKELTEYAYEQLSSIEGLEIYGPPKERRAGVITFNLADIHPHDVATAVDTEGVAVRAGHHCAQPLMKWLNVSSTARASFYIYNTKEDVDQLVEALKQTKEFFSYEF . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 9107 10348 . + 0 GCA_005502385.1_01763 GCA_005502385.1_01763_gene,GCA_005502385.1_01763_mRNA GCA_005502385.1_01763 putative cysteine desulfurase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAETSLNIQEIIEDFPILNQKINGKRLAYLDSTATSQTPVQVLNVLDDYYKRYNSNVHRGVHTLGSLATDGYESARETVRRFINAKYFEEIIFTRGTTASINIVAHSYGDANINEGDEIVVTEMEHHANIVPWQQLAKRKKATLKFIPMTDDGELRIEDVKSTINDNTKIVAITHVSNVLGTINDIKAIAKIAHEHGAIISVDGAQSAPHMDIDVQDLDVDFFSFSGHKMLGPTGIGVLYGKRELLQNMEPVEYGGDMIDFVSKYDATWADLPTKFEAGTPIIAQAIGLAEAIRYIENIGFDAIHQHEKELTEYAYEQLSSIEGLEIYGPPKERRAGVITFNLADIHPHDVATAVDTEGVAVRAGHHCAQPLMKWLNVSSTARASFYIYNTKEDVDQLVEALKQTKEFFSYEF persistent 413 csdA putative cysteine desulfurase 2.8.1.7,4.4.1.16 COG0520,E UniRef50_O32164,UniRef90_A0A380G3E9 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 10338 10799 . + . GCA_005502385.1_01764_gene GCA_005502385.1_01764 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSFNNLDQLYRSVIMDHYKNPRNKGVLDNGSMTVDMNNPTCGDRIRLTFDIEDGIIQEAKFEGEGCSISMSSASMMTEAVKGHSLGEAMQMSQEFTKMMLGEDYNITEDMGDVEALQGVSQFPARIKCATLAWKALEKGTVQKEGKAEGTTEE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 10338 10799 . + . GCA_005502385.1_01764_mRNA GCA_005502385.1_01764 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSFNNLDQLYRSVIMDHYKNPRNKGVLDNGSMTVDMNNPTCGDRIRLTFDIEDGIIQEAKFEGEGCSISMSSASMMTEAVKGHSLGEAMQMSQEFTKMMLGEDYNITEDMGDVEALQGVSQFPARIKCATLAWKALEKGTVQKEGKAEGTTEE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 10338 10799 . + 0 GCA_005502385.1_01764 GCA_005502385.1_01764_gene,GCA_005502385.1_01764_mRNA GCA_005502385.1_01764 Zinc-dependent sulfurtransferase SufU GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSFNNLDQLYRSVIMDHYKNPRNKGVLDNGSMTVDMNNPTCGDRIRLTFDIEDGIIQEAKFEGEGCSISMSSASMMTEAVKGHSLGEAMQMSQEFTKMMLGEDYNITEDMGDVEALQGVSQFPARIKCATLAWKALEKGTVQKEGKAEGTTEE persistent 153 sufU Fe-S cluster assembly sulfur transfer protein SufU GO:0005198,GO:0016226 COG0822,O WP_002448166.1 UPI00019FC5EF UniRef100_A0A1L8Y525,UniRef50_O32163,UniRef90_Q2FZY4 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 10961 12358 . + . GCA_005502385.1_01765_gene GCA_005502385.1_01765 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAKKAPDVGDYKYGFHDEDVSIFRSERGLTENIVREISKMKEEPEWMLNFRLKALKLFYKIPMPQWGGDLSELNFDDITYYVKPSEHTERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEKGIIFKDTDSALRENEDLFKEYFASVVPAADNKFAALNSAVWSGGSFIYVPKNVKLDTPLQAYFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYTTIQNWANNVYNLVTKRTFVHENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 10961 12358 . + . GCA_005502385.1_01765_mRNA GCA_005502385.1_01765 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAKKAPDVGDYKYGFHDEDVSIFRSERGLTENIVREISKMKEEPEWMLNFRLKALKLFYKIPMPQWGGDLSELNFDDITYYVKPSEHTERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEKGIIFKDTDSALRENEDLFKEYFASVVPAADNKFAALNSAVWSGGSFIYVPKNVKLDTPLQAYFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYTTIQNWANNVYNLVTKRTFVHENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 10961 12358 . + 0 GCA_005502385.1_01765 GCA_005502385.1_01765_gene,GCA_005502385.1_01765_mRNA GCA_005502385.1_01765 hypothetical protein UPF0051 protein SA0778 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAKKAPDVGDYKYGFHDEDVSIFRSERGLTENIVREISKMKEEPEWMLNFRLKALKLFYKIPMPQWGGDLSELNFDDITYYVKPSEHTERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEKGIIFKDTDSALRENEDLFKEYFASVVPAADNKFAALNSAVWSGGSFIYVPKNVKLDTPLQAYFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYTTIQNWANNVYNLVTKRTFVHENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG persistent 465 sufB Fe-S cluster assembly protein SufB GO:0016226 COG0719,O WP_002448087.1 UPI00019FC5F0 UniRef100_A0A1L8Y575,UniRef50_O32162,UniRef90_Q2FZY3 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 12695 13543 . + . GCA_005502385.1_01766_gene GCA_005502385.1_01766 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MINIGLTGWGDHYSLYEDLERQTDKLRTYASHFPVVELDASYYAIQPERNILKWINETPDKFQFIVKIHQALTLHSDYKTYADSRSELFKQFRHMLEPLIAHHKLAMVLVQFPPWFDCTAQNINYILYVRQQLEDIPMCVEFRHQSWFNSQFKEQTLMFLTEHQIIHAVVDEPQIKDGSIPLVNRITSSTAFVRYHGRNQHGWTKKDMTDQEWRDVRYLYNYNENELKDLANKVQILEQKAEKVYVVFNNNSGGHAAQNAKTYQNILDIEYTGLAPQQLKFF . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 12695 13543 . + . GCA_005502385.1_01766_mRNA GCA_005502385.1_01766 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MINIGLTGWGDHYSLYEDLERQTDKLRTYASHFPVVELDASYYAIQPERNILKWINETPDKFQFIVKIHQALTLHSDYKTYADSRSELFKQFRHMLEPLIAHHKLAMVLVQFPPWFDCTAQNINYILYVRQQLEDIPMCVEFRHQSWFNSQFKEQTLMFLTEHQIIHAVVDEPQIKDGSIPLVNRITSSTAFVRYHGRNQHGWTKKDMTDQEWRDVRYLYNYNENELKDLANKVQILEQKAEKVYVVFNNNSGGHAAQNAKTYQNILDIEYTGLAPQQLKFF . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 12695 13543 . + 0 GCA_005502385.1_01766 GCA_005502385.1_01766_gene,GCA_005502385.1_01766_mRNA GCA_005502385.1_01766 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MINIGLTGWGDHYSLYEDLERQTDKLRTYASHFPVVELDASYYAIQPERNILKWINETPDKFQFIVKIHQALTLHSDYKTYADSRSELFKQFRHMLEPLIAHHKLAMVLVQFPPWFDCTAQNINYILYVRQQLEDIPMCVEFRHQSWFNSQFKEQTLMFLTEHQIIHAVVDEPQIKDGSIPLVNRITSSTAFVRYHGRNQHGWTKKDMTDQEWRDVRYLYNYNENELKDLANKVQILEQKAEKVYVVFNNNSGGHAAQNAKTYQNILDIEYTGLAPQQLKFF persistent 282 DUF72 domain-containing protein WP_049379462.1 UPI00066CBA87 UniRef100_A0A8I0W8W3,UniRef50_A0A0A8JCS6,UniRef90_A0AAE5JLI2 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 13557 14384 . + . GCA_005502385.1_01767_gene GCA_005502385.1_01767 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFLTMILLVLIGLLSAVLGSLVGIGGGIIIVPTLVYLGVNHHLLHGITTQIAIGTSSVILIVTGLSSSIGYLKTKQVDIKNGSIFLFGLLPGSLIGSFLSRYLTLNSFNLYFGIFMICVSILLMIRYKIKPFKIFDKEKYRKTYIDAKGMTYHYSVPPMFAFFATLFIGVLTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSVMSSIGHIIQGHVAWSYSIILIISSYIGAQIGVKINHSIKSETVVLLLRTVMLIMGVYLIIKSFL . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 13557 14384 . + . GCA_005502385.1_01767_mRNA GCA_005502385.1_01767 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFLTMILLVLIGLLSAVLGSLVGIGGGIIIVPTLVYLGVNHHLLHGITTQIAIGTSSVILIVTGLSSSIGYLKTKQVDIKNGSIFLFGLLPGSLIGSFLSRYLTLNSFNLYFGIFMICVSILLMIRYKIKPFKIFDKEKYRKTYIDAKGMTYHYSVPPMFAFFATLFIGVLTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSVMSSIGHIIQGHVAWSYSIILIISSYIGAQIGVKINHSIKSETVVLLLRTVMLIMGVYLIIKSFL . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 13557 14384 . + 0 GCA_005502385.1_01767 GCA_005502385.1_01767_gene,GCA_005502385.1_01767_mRNA GCA_005502385.1_01767 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFLTMILLVLIGLLSAVLGSLVGIGGGIIIVPTLVYLGVNHHLLHGITTQIAIGTSSVILIVTGLSSSIGYLKTKQVDIKNGSIFLFGLLPGSLIGSFLSRYLTLNSFNLYFGIFMICVSILLMIRYKIKPFKIFDKEKYRKTYIDAKGMTYHYSVPPMFAFFATLFIGVLTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSVMSSIGHIIQGHVAWSYSIILIISSYIGAQIGVKINHSIKSETVVLLLRTVMLIMGVYLIIKSFL persistent 275 putative membrane transporter protein WP_017175871.1 UPI0002EA3F6D UniRef100_A0A4Q9WP38,UniRef50_A0A7U7PY32,UniRef90_A0A4Q9WP38 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 14404 15735 . + . GCA_005502385.1_01768_gene GCA_005502385.1_01768 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKLTIFHTNDIHSHLNEYARIMTYMAEHRPELQHPSLYLDIGDHVDLSTPVTEATMGKKNVELLNEAHCDIVTIGNNEGMTISHEALNNLYNDAQFKVICANVLDEDGHLPRHIATSYIKEIEDVRFLFVAATAPFTPFYRALDWIVTDPLEAIKDEIEQRKGQYDVLIVMSHVGVFFDEKLCQEIPEIDVILGSHTHHHFNHGEVNNGVLMAAAGKYGHYLGEVNLTIENKKVVTKEATLHPVDTLPVVKTHFDEEGKDLMNKAIINKPVSLSSKTNVITKTTYLLAESVYEFTNADCTIINAGLIVNNVESDQLTEYDIHTMLPHPINLVRVRLKGSELKKIILKSQKQEYMYEHVQGLGFRGDIFGGYILYKCGFIQSEHRFFVDGQEIEDNRTYILGTVDMYTFGRYFPLLKGTSIDYLMPEFLRDIFKEKLIHMHHSS . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 14404 15735 . + . GCA_005502385.1_01768_mRNA GCA_005502385.1_01768 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKLTIFHTNDIHSHLNEYARIMTYMAEHRPELQHPSLYLDIGDHVDLSTPVTEATMGKKNVELLNEAHCDIVTIGNNEGMTISHEALNNLYNDAQFKVICANVLDEDGHLPRHIATSYIKEIEDVRFLFVAATAPFTPFYRALDWIVTDPLEAIKDEIEQRKGQYDVLIVMSHVGVFFDEKLCQEIPEIDVILGSHTHHHFNHGEVNNGVLMAAAGKYGHYLGEVNLTIENKKVVTKEATLHPVDTLPVVKTHFDEEGKDLMNKAIINKPVSLSSKTNVITKTTYLLAESVYEFTNADCTIINAGLIVNNVESDQLTEYDIHTMLPHPINLVRVRLKGSELKKIILKSQKQEYMYEHVQGLGFRGDIFGGYILYKCGFIQSEHRFFVDGQEIEDNRTYILGTVDMYTFGRYFPLLKGTSIDYLMPEFLRDIFKEKLIHMHHSS . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 14404 15735 . + 0 GCA_005502385.1_01768 GCA_005502385.1_01768_gene,GCA_005502385.1_01768_mRNA GCA_005502385.1_01768 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKLTIFHTNDIHSHLNEYARIMTYMAEHRPELQHPSLYLDIGDHVDLSTPVTEATMGKKNVELLNEAHCDIVTIGNNEGMTISHEALNNLYNDAQFKVICANVLDEDGHLPRHIATSYIKEIEDVRFLFVAATAPFTPFYRALDWIVTDPLEAIKDEIEQRKGQYDVLIVMSHVGVFFDEKLCQEIPEIDVILGSHTHHHFNHGEVNNGVLMAAAGKYGHYLGEVNLTIENKKVVTKEATLHPVDTLPVVKTHFDEEGKDLMNKAIINKPVSLSSKTNVITKTTYLLAESVYEFTNADCTIINAGLIVNNVESDQLTEYDIHTMLPHPINLVRVRLKGSELKKIILKSQKQEYMYEHVQGLGFRGDIFGGYILYKCGFIQSEHRFFVDGQEIEDNRTYILGTVDMYTFGRYFPLLKGTSIDYLMPEFLRDIFKEKLIHMHHSS persistent 443 Bifunctional metallophosphatase/5'-nucleotidase WP_049420587.1 UPI00066C1B06 UniRef100_UPI00066C1B06,UniRef50_A0A2I7Y753,UniRef90_A0A4Q9WMY6 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 15847 16767 . + . GCA_005502385.1_01769_gene GCA_005502385.1_01769 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MATKNEEILRKPDWLKIKLNTNENYIGLKKMMREKNLHTVCEEAKCPNIHECWGARRTATFMILGAVCTRACRFCAVKTGLPNELDLNEPERVAESVELMNLKHVVITAVARDDLRDAGSNVYAETVRKVRERNPYTTIEILPSDMGGDYEALETLMASRPDILNHNIETVRRLTPRVRARATYDRTLEFLRRSKELQPDIPTKSSLMVGLGETLEEIYETMDDLRANDVDILTIGQYLQPSRKHLKVEKYYTPLEFGKLRKIAMEKGFKHCEAGPMVRSSYHADEQVNEAAKEKHRLGEEQLQQK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 15847 16767 . + . GCA_005502385.1_01769_mRNA GCA_005502385.1_01769 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MATKNEEILRKPDWLKIKLNTNENYIGLKKMMREKNLHTVCEEAKCPNIHECWGARRTATFMILGAVCTRACRFCAVKTGLPNELDLNEPERVAESVELMNLKHVVITAVARDDLRDAGSNVYAETVRKVRERNPYTTIEILPSDMGGDYEALETLMASRPDILNHNIETVRRLTPRVRARATYDRTLEFLRRSKELQPDIPTKSSLMVGLGETLEEIYETMDDLRANDVDILTIGQYLQPSRKHLKVEKYYTPLEFGKLRKIAMEKGFKHCEAGPMVRSSYHADEQVNEAAKEKHRLGEEQLQQK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 15847 16767 . + 0 GCA_005502385.1_01769 GCA_005502385.1_01769_gene,GCA_005502385.1_01769_mRNA GCA_005502385.1_01769 Lipoyl synthase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MATKNEEILRKPDWLKIKLNTNENYIGLKKMMREKNLHTVCEEAKCPNIHECWGARRTATFMILGAVCTRACRFCAVKTGLPNELDLNEPERVAESVELMNLKHVVITAVARDDLRDAGSNVYAETVRKVRERNPYTTIEILPSDMGGDYEALETLMASRPDILNHNIETVRRLTPRVRARATYDRTLEFLRRSKELQPDIPTKSSLMVGLGETLEEIYETMDDLRANDVDILTIGQYLQPSRKHLKVEKYYTPLEFGKLRKIAMEKGFKHCEAGPMVRSSYHADEQVNEAAKEKHRLGEEQLQQK persistent 306 lipA lipoyl synthase 2.8.1.8 GO:0005737,GO:0009107,GO:0016992,GO:0046872,GO:0051539,GO:1904047 COG0320,H WP_002448197.1 UPI00019FC5F4 UniRef100_A0A1L8Y4I5,UniRef50_Q2FZX4,UniRef90_Q2FZX4 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 16971 17357 . + . GCA_005502385.1_01770_gene GCA_005502385.1_01770 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIKVNQQYFELIEDYRECFDEELFASRYSDILDKYDFVVGDFGYDQLRLKGFYKDSNKKAEISKRFSTIQDYILEYCNFGCPYFIVRHINDNERLELDSVDEVEDKLHDVKIKPTIQATQSTEKKNNK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 16971 17357 . + . GCA_005502385.1_01770_mRNA GCA_005502385.1_01770 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIKVNQQYFELIEDYRECFDEELFASRYSDILDKYDFVVGDFGYDQLRLKGFYKDSNKKAEISKRFSTIQDYILEYCNFGCPYFIVRHINDNERLELDSVDEVEDKLHDVKIKPTIQATQSTEKKNNK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 16971 17357 . + 0 GCA_005502385.1_01770 GCA_005502385.1_01770_gene,GCA_005502385.1_01770_mRNA GCA_005502385.1_01770 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIKVNQQYFELIEDYRECFDEELFASRYSDILDKYDFVVGDFGYDQLRLKGFYKDSNKKAEISKRFSTIQDYILEYCNFGCPYFIVRHINDNERLELDSVDEVEDKLHDVKIKPTIQATQSTEKKNNK persistent 128 DUF1027 domain-containing protein WP_017175869.1 UPI0002E500EB UniRef100_A0A4Q9WNR2,UniRef50_A0A1E9A1V0,UniRef90_A0A974L249 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 17411 17677 . - . GCA_005502385.1_01771_gene GCA_005502385.1_01771 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIDMFLYDDEEQSQAQFVGFVGEHSRYDLMLIQTDRHYGKTLVLNLQTNKFGIIGTDDIEEEGYIAHILGVSQEESEEIIEYLNQVIQ . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 17411 17677 . - . GCA_005502385.1_01771_mRNA GCA_005502385.1_01771 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIDMFLYDDEEQSQAQFVGFVGEHSRYDLMLIQTDRHYGKTLVLNLQTNKFGIIGTDDIEEEGYIAHILGVSQEESEEIIEYLNQVIQ . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 17411 17677 . - 0 GCA_005502385.1_01771 GCA_005502385.1_01771_gene,GCA_005502385.1_01771_mRNA GCA_005502385.1_01771 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIDMFLYDDEEQSQAQFVGFVGEHSRYDLMLIQTDRHYGKTLVLNLQTNKFGIIGTDDIEEEGYIAHILGVSQEESEEIIEYLNQVIQ persistent 88 DUF3055 domain-containing protein WP_002448201.1 UPI00019FC5F6 UniRef100_A0A2A1M9S3,UniRef50_Q2FZX2,UniRef90_A0A2A1M9S3 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 17780 18214 . + . GCA_005502385.1_01772_gene GCA_005502385.1_01772 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MYFVDKDKLALKIKYLNQLIKDYETNKSNHYAFERIAQMLIESSVDIGNMIIDAFILRDPGNYKDVIDILELEGVISKDTQNHINDTVKIRKQFAHHYTELEVETLVPLFDTSIPYYRQFVKEVTQFLKKENVPITAFGKGDYS . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 17780 18214 . + . GCA_005502385.1_01772_mRNA GCA_005502385.1_01772 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MYFVDKDKLALKIKYLNQLIKDYETNKSNHYAFERIAQMLIESSVDIGNMIIDAFILRDPGNYKDVIDILELEGVISKDTQNHINDTVKIRKQFAHHYTELEVETLVPLFDTSIPYYRQFVKEVTQFLKKENVPITAFGKGDYS . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 17780 18214 . + 0 GCA_005502385.1_01772 GCA_005502385.1_01772_gene,GCA_005502385.1_01772_mRNA GCA_005502385.1_01772 hypothetical protein UPF0331 protein YutE GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MYFVDKDKLALKIKYLNQLIKDYETNKSNHYAFERIAQMLIESSVDIGNMIIDAFILRDPGNYKDVIDILELEGVISKDTQNHINDTVKIRKQFAHHYTELEVETLVPLFDTSIPYYRQFVKEVTQFLKKENVPITAFGKGDYS persistent 144 DUF86 domain-containing protein WP_017175868.1 UPI0002DDEF9A UniRef100_A0A3S7GTF4,UniRef50_A0A077UTM6,UniRef90_A0A549UNX8 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 18214 19002 . + . GCA_005502385.1_01773_gene GCA_005502385.1_01773 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKNYKGYLIDLDGTMYMGTAEIDGAAQFIDYLNKNDIPHLYVTNNSTKTPEEVTEKLKEMKIDAKPDEVVTSALATANYIAEENSQASVYMLGGNGLRTALTDAGLTVKEDENVDYVVIGLDEAVTYEKLAIATLAVRKGAKFISTNPDVSIPKERGFLPGNGAITSVVSVSTGQQPQFIGKPETIIMQIALDILKLDKSEVAMVGDLYDTDIMSGINVGMDTVHVQTGVTSYEEIQTKQPKPTYSFKDLNVAIAELESNTN . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 18214 19002 . + . GCA_005502385.1_01773_mRNA GCA_005502385.1_01773 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKNYKGYLIDLDGTMYMGTAEIDGAAQFIDYLNKNDIPHLYVTNNSTKTPEEVTEKLKEMKIDAKPDEVVTSALATANYIAEENSQASVYMLGGNGLRTALTDAGLTVKEDENVDYVVIGLDEAVTYEKLAIATLAVRKGAKFISTNPDVSIPKERGFLPGNGAITSVVSVSTGQQPQFIGKPETIIMQIALDILKLDKSEVAMVGDLYDTDIMSGINVGMDTVHVQTGVTSYEEIQTKQPKPTYSFKDLNVAIAELESNTN . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 18214 19002 . + 0 GCA_005502385.1_01773 GCA_005502385.1_01773_gene,GCA_005502385.1_01773_mRNA GCA_005502385.1_01773 Acid sugar phosphatase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKNYKGYLIDLDGTMYMGTAEIDGAAQFIDYLNKNDIPHLYVTNNSTKTPEEVTEKLKEMKIDAKPDEVVTSALATANYIAEENSQASVYMLGGNGLRTALTDAGLTVKEDENVDYVVIGLDEAVTYEKLAIATLAVRKGAKFISTNPDVSIPKERGFLPGNGAITSVVSVSTGQQPQFIGKPETIIMQIALDILKLDKSEVAMVGDLYDTDIMSGINVGMDTVHVQTGVTSYEEIQTKQPKPTYSFKDLNVAIAELESNTN persistent 262 Acid sugar phosphatase WP_002448132.1 UPI00019FC5F8 UniRef100_A0A4Q9WZH2,UniRef50_Q2FZX0,UniRef90_A0A4Q9WZH2 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 19523 20977 . + . GCA_005502385.1_01774_gene GCA_005502385.1_01774 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTDIINLINDIGQKNPDRVAIRHKSDELTYRQLIEESSKLAHYLQDTNKPLIIYGHMSPYMVVGMIGAIKAGCGYVPIDTSVPIERVEMIMNKVDPTFILNTTDSSVNQPRKELTIEDIKHSDYPIVFDSQMDKTDVVYTIFTSGSTGEPKGVQIEYASLIEFAEWMVSLNETDNHQEWLNQAPFSFDLSVMAIYPCLTSGGTLNLVDKDMIKKPKLLNEMLVQTPINAWVSTPSFIEMCLLLPNLNEKDYPSLNHFFFCGEILPHRTAKALVDRYPNAIVYNTYGPTEATVAVTGVKITPEILERYNPLPVGVARPNTTLSTTDEGELVIKGTSVSLGYLKNKEKTEAVFKFDNGVRIYHTGDKAIEKDGYWFIQGRIDFQIKLNGYRMELEEIETQLRHSKYVRETVVVPIYKNGKVVYLVGAIVPTKKVDNDLEMTRNIKNELKSRLPEYMIPRKFVWMEQLPLTSNGKLDRKQVAEDIDA . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 19523 20977 . + . GCA_005502385.1_01774_mRNA GCA_005502385.1_01774 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTDIINLINDIGQKNPDRVAIRHKSDELTYRQLIEESSKLAHYLQDTNKPLIIYGHMSPYMVVGMIGAIKAGCGYVPIDTSVPIERVEMIMNKVDPTFILNTTDSSVNQPRKELTIEDIKHSDYPIVFDSQMDKTDVVYTIFTSGSTGEPKGVQIEYASLIEFAEWMVSLNETDNHQEWLNQAPFSFDLSVMAIYPCLTSGGTLNLVDKDMIKKPKLLNEMLVQTPINAWVSTPSFIEMCLLLPNLNEKDYPSLNHFFFCGEILPHRTAKALVDRYPNAIVYNTYGPTEATVAVTGVKITPEILERYNPLPVGVARPNTTLSTTDEGELVIKGTSVSLGYLKNKEKTEAVFKFDNGVRIYHTGDKAIEKDGYWFIQGRIDFQIKLNGYRMELEEIETQLRHSKYVRETVVVPIYKNGKVVYLVGAIVPTKKVDNDLEMTRNIKNELKSRLPEYMIPRKFVWMEQLPLTSNGKLDRKQVAEDIDA . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 19523 20977 . + 0 GCA_005502385.1_01774 GCA_005502385.1_01774_gene,GCA_005502385.1_01774_mRNA GCA_005502385.1_01774 D-alanine--D-alanyl carrier protein ligase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTDIINLINDIGQKNPDRVAIRHKSDELTYRQLIEESSKLAHYLQDTNKPLIIYGHMSPYMVVGMIGAIKAGCGYVPIDTSVPIERVEMIMNKVDPTFILNTTDSSVNQPRKELTIEDIKHSDYPIVFDSQMDKTDVVYTIFTSGSTGEPKGVQIEYASLIEFAEWMVSLNETDNHQEWLNQAPFSFDLSVMAIYPCLTSGGTLNLVDKDMIKKPKLLNEMLVQTPINAWVSTPSFIEMCLLLPNLNEKDYPSLNHFFFCGEILPHRTAKALVDRYPNAIVYNTYGPTEATVAVTGVKITPEILERYNPLPVGVARPNTTLSTTDEGELVIKGTSVSLGYLKNKEKTEAVFKFDNGVRIYHTGDKAIEKDGYWFIQGRIDFQIKLNGYRMELEEIETQLRHSKYVRETVVVPIYKNGKVVYLVGAIVPTKKVDNDLEMTRNIKNELKSRLPEYMIPRKFVWMEQLPLTSNGKLDRKQVAEDIDA persistent 484 dltA D-alanine--poly(phosphoribitol) ligase subunit DltA 6.1.1.13 GO:0005524,GO:0019350,GO:0047473 WP_017175866.1 UPI0002D53212 UniRef100_A0A3S7GT79,UniRef50_P68876,UniRef90_A0A3S7GT79 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 20974 22188 . + . GCA_005502385.1_01775_gene GCA_005502385.1_01775 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIPYGTFTFFLVAFIVLLPVIILGFLGKRSYVYNGISTVIMIVIIFSSDTYNLFGQKYLSVQLISFVIYLIWQVLLIMWYYKSRQKNNTFIKFLIIMILSILPLALVKILQSSWLGGHQIHFHEHKLIEFVGFLGISYVTFKSVQLIMEIRDGSIKEIKVGKLIQFISFFPTVSSGPIDRYKRFVKDDKKIPTGEQYRGMVVKAIHMIMMGFLYKYIIAHLINVYAIMPLLMHLHGFTHKWLYMYAYSFYLFFDFAGYSLFAIAVSYLYGINTPPNFKQPFKARNIKDFWNRWHMSLSFWFRDCVYMRTLFYMSSKKIMKNQFAMSNFAFFLNFFIMGVWHGLEVFYIVYGIYHGLMFIGYGYYERWRKKHPPRFQNGFATALSVIITFHFVAFGFLIFSGKLI . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 20974 22188 . + . GCA_005502385.1_01775_mRNA GCA_005502385.1_01775 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIPYGTFTFFLVAFIVLLPVIILGFLGKRSYVYNGISTVIMIVIIFSSDTYNLFGQKYLSVQLISFVIYLIWQVLLIMWYYKSRQKNNTFIKFLIIMILSILPLALVKILQSSWLGGHQIHFHEHKLIEFVGFLGISYVTFKSVQLIMEIRDGSIKEIKVGKLIQFISFFPTVSSGPIDRYKRFVKDDKKIPTGEQYRGMVVKAIHMIMMGFLYKYIIAHLINVYAIMPLLMHLHGFTHKWLYMYAYSFYLFFDFAGYSLFAIAVSYLYGINTPPNFKQPFKARNIKDFWNRWHMSLSFWFRDCVYMRTLFYMSSKKIMKNQFAMSNFAFFLNFFIMGVWHGLEVFYIVYGIYHGLMFIGYGYYERWRKKHPPRFQNGFATALSVIITFHFVAFGFLIFSGKLI . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 20974 22188 . + 0 GCA_005502385.1_01775 GCA_005502385.1_01775_gene,GCA_005502385.1_01775_mRNA GCA_005502385.1_01775 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIPYGTFTFFLVAFIVLLPVIILGFLGKRSYVYNGISTVIMIVIIFSSDTYNLFGQKYLSVQLISFVIYLIWQVLLIMWYYKSRQKNNTFIKFLIIMILSILPLALVKILQSSWLGGHQIHFHEHKLIEFVGFLGISYVTFKSVQLIMEIRDGSIKEIKVGKLIQFISFFPTVSSGPIDRYKRFVKDDKKIPTGEQYRGMVVKAIHMIMMGFLYKYIIAHLINVYAIMPLLMHLHGFTHKWLYMYAYSFYLFFDFAGYSLFAIAVSYLYGINTPPNFKQPFKARNIKDFWNRWHMSLSFWFRDCVYMRTLFYMSSKKIMKNQFAMSNFAFFLNFFIMGVWHGLEVFYIVYGIYHGLMFIGYGYYERWRKKHPPRFQNGFATALSVIITFHFVAFGFLIFSGKLI persistent 404 dltB D-alanyl-lipoteichoic acid biosynthesis protein DltB GO:0016746,GO:0070395 COG1696,M WP_019835072.1 UPI0003725DAC UniRef100_UPI0003725DAC,UniRef50_B9EAK7,UniRef90_A0A2A1K8N6 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 22204 22440 . + . GCA_005502385.1_01776_gene GCA_005502385.1_01776 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MEFREQVLEVLADVAENDVVKENPDVEIFEEGIIDSFQTVGLLLEIQNRLGIEVSIMDFDRDEWATPNKIVEALEELR . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 22204 22440 . + . GCA_005502385.1_01776_mRNA GCA_005502385.1_01776 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MEFREQVLEVLADVAENDVVKENPDVEIFEEGIIDSFQTVGLLLEIQNRLGIEVSIMDFDRDEWATPNKIVEALEELR . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 22204 22440 . + 0 GCA_005502385.1_01776 GCA_005502385.1_01776_gene,GCA_005502385.1_01776_mRNA GCA_005502385.1_01776 D-alanyl carrier protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MEFREQVLEVLADVAENDVVKENPDVEIFEEGIIDSFQTVGLLLEIQNRLGIEVSIMDFDRDEWATPNKIVEALEELR persistent 78 dltC D-alanine--poly(phosphoribitol) ligase subunit 2 6.1.1.13 GO:0005737,GO:0019350,GO:0036370,GO:0070395,GO:0071555 COG0236,I WP_017175865.1 UPI00035D6B7D UniRef100_A0A4Q9WN48,UniRef50_P39579,UniRef90_Q2FZW4 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 22437 23594 . + . GCA_005502385.1_01777_gene GCA_005502385.1_01777 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKFKPFLPILISGIIFLAFVLMPASWFTGLVNNKTLADNRTSLTDQVLKGTLIQNQLFSNDKYYPLYGSSELNKRDPFNPAIAMHHRKNTKPVFLVGTGGNTDLINAIELAGQYDQLKGKKMTFIISPQWFSTHGVNDMDMAARTTPNQINQIFQQKDMPSELKQRYAKRLLKFRSVPNKEYLKELVKDPSNPKGRYISKFKESQLLKIEAIKTYFSLDKSPLTHVHSLTSPNDSWKNMSNKAVQLGEKRSTSNSYGIRNEYWKKLMHKKPMNRRQYEFKMNSPEFKDLSLLVDTMHQAGADVQYVILPVNGKWYDHLGIHRSTREPVYKKIHKTVVAHGGKVYDMSNKDYEKYVLSDVVHVGWKGWVYMDRQIEKHMNNHQTQF . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 22437 23594 . + . GCA_005502385.1_01777_mRNA GCA_005502385.1_01777 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKFKPFLPILISGIIFLAFVLMPASWFTGLVNNKTLADNRTSLTDQVLKGTLIQNQLFSNDKYYPLYGSSELNKRDPFNPAIAMHHRKNTKPVFLVGTGGNTDLINAIELAGQYDQLKGKKMTFIISPQWFSTHGVNDMDMAARTTPNQINQIFQQKDMPSELKQRYAKRLLKFRSVPNKEYLKELVKDPSNPKGRYISKFKESQLLKIEAIKTYFSLDKSPLTHVHSLTSPNDSWKNMSNKAVQLGEKRSTSNSYGIRNEYWKKLMHKKPMNRRQYEFKMNSPEFKDLSLLVDTMHQAGADVQYVILPVNGKWYDHLGIHRSTREPVYKKIHKTVVAHGGKVYDMSNKDYEKYVLSDVVHVGWKGWVYMDRQIEKHMNNHQTQF . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 22437 23594 . + 0 GCA_005502385.1_01777 GCA_005502385.1_01777_gene,GCA_005502385.1_01777_mRNA GCA_005502385.1_01777 Protein DltD GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKFKPFLPILISGIIFLAFVLMPASWFTGLVNNKTLADNRTSLTDQVLKGTLIQNQLFSNDKYYPLYGSSELNKRDPFNPAIAMHHRKNTKPVFLVGTGGNTDLINAIELAGQYDQLKGKKMTFIISPQWFSTHGVNDMDMAARTTPNQINQIFQQKDMPSELKQRYAKRLLKFRSVPNKEYLKELVKDPSNPKGRYISKFKESQLLKIEAIKTYFSLDKSPLTHVHSLTSPNDSWKNMSNKAVQLGEKRSTSNSYGIRNEYWKKLMHKKPMNRRQYEFKMNSPEFKDLSLLVDTMHQAGADVQYVILPVNGKWYDHLGIHRSTREPVYKKIHKTVVAHGGKVYDMSNKDYEKYVLSDVVHVGWKGWVYMDRQIEKHMNNHQTQF persistent 385 dltD D-alanyl-lipoteichoic acid biosynthesis protein DltD GO:0070394 WP_048679902.1 UPI0006608728 UniRef100_UPI0006608728,UniRef50_Q2FZW3,UniRef90_A0A974KYW1 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 23660 23902 . - . GCA_005502385.1_01778_gene GCA_005502385.1_01778 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MPTENATMFDQVAEVIERLRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEEVPGVIEVEQVF . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 23660 23902 . - . GCA_005502385.1_01778_mRNA GCA_005502385.1_01778 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MPTENATMFDQVAEVIERLRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEEVPGVIEVEQVF . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 23660 23902 . - 0 GCA_005502385.1_01778 GCA_005502385.1_01778_gene,GCA_005502385.1_01778_mRNA GCA_005502385.1_01778 Fe/S biogenesis protein NfuA GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MPTENATMFDQVAEVIERLRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEEVPGVIEVEQVF persistent 80 nifU NIF system FeS cluster assembly NifU C-terminal domain-containing protein COG0694,O WP_002433501.1 UPI000054BD3E UniRef100_A0A380G2L4,UniRef50_I0JQ31,UniRef90_Q2FZW2 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 24006 24329 . + . GCA_005502385.1_01779_gene GCA_005502385.1_01779 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTKVSVVVYGADVVCASCVNAPTSKNTYEWLKPLLERKYPNIHFEYTYIDFQKETENLSDHDQQYIEQIENDELFYPLITMNDEYVADGYIQSKKVTHFIDQYIINN . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 24006 24329 . + . GCA_005502385.1_01779_mRNA GCA_005502385.1_01779 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTKVSVVVYGADVVCASCVNAPTSKNTYEWLKPLLERKYPNIHFEYTYIDFQKETENLSDHDQQYIEQIENDELFYPLITMNDEYVADGYIQSKKVTHFIDQYIINN . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 24006 24329 . + 0 GCA_005502385.1_01779 GCA_005502385.1_01779_gene,GCA_005502385.1_01779_mRNA GCA_005502385.1_01779 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTKVSVVVYGADVVCASCVNAPTSKNTYEWLKPLLERKYPNIHFEYTYIDFQKETENLSDHDQQYIEQIENDELFYPLITMNDEYVADGYIQSKKVTHFIDQYIINN persistent 107 DUF1462 domain-containing protein WP_002448149.1 UPI00019FC5FD UniRef100_A0A1L8Y4K0,UniRef50_A0A0H3JTK4,UniRef90_A0A1L8Y4K0 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 24421 25485 . - . GCA_005502385.1_01780_gene GCA_005502385.1_01780 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKHLVLLGGGYGNMRIMSRILPDVLPQEYTLTLIDRMPFHGLKPEFYALAAGTKSDSDVRMNFPNSHRVNTIYGEISDIDLDNQIVSVGQTKVDYSELIIGLGCEDKYHNVPGAKEYTHSIQTLSKARETFHSISELPKGARVGIVGAGLSGIELASELRESRTDLEIILYDRGPRILRNFPEKLSNYIAKWFRENNVNVVPNSLIDKVEQGTIYNNGTPEPVDIVVWTAGIQPVEIVRKLPIDTNKSGRVIVNQYHQVPTYKNVYVVGDCAALPHAPSAQLAEVQGDQIADVLKKQWNHEPLPEKMPELKVQGFLGSLGEKKGFAYIMDRTVTGRLAHILKSGVLWLYKYHNG . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 24421 25485 . - . GCA_005502385.1_01780_mRNA GCA_005502385.1_01780 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKHLVLLGGGYGNMRIMSRILPDVLPQEYTLTLIDRMPFHGLKPEFYALAAGTKSDSDVRMNFPNSHRVNTIYGEISDIDLDNQIVSVGQTKVDYSELIIGLGCEDKYHNVPGAKEYTHSIQTLSKARETFHSISELPKGARVGIVGAGLSGIELASELRESRTDLEIILYDRGPRILRNFPEKLSNYIAKWFRENNVNVVPNSLIDKVEQGTIYNNGTPEPVDIVVWTAGIQPVEIVRKLPIDTNKSGRVIVNQYHQVPTYKNVYVVGDCAALPHAPSAQLAEVQGDQIADVLKKQWNHEPLPEKMPELKVQGFLGSLGEKKGFAYIMDRTVTGRLAHILKSGVLWLYKYHNG . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 24421 25485 . - 0 GCA_005502385.1_01780 GCA_005502385.1_01780_gene,GCA_005502385.1_01780_mRNA GCA_005502385.1_01780 NADH dehydrogenase-like protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKHLVLLGGGYGNMRIMSRILPDVLPQEYTLTLIDRMPFHGLKPEFYALAAGTKSDSDVRMNFPNSHRVNTIYGEISDIDLDNQIVSVGQTKVDYSELIIGLGCEDKYHNVPGAKEYTHSIQTLSKARETFHSISELPKGARVGIVGAGLSGIELASELRESRTDLEIILYDRGPRILRNFPEKLSNYIAKWFRENNVNVVPNSLIDKVEQGTIYNNGTPEPVDIVVWTAGIQPVEIVRKLPIDTNKSGRVIVNQYHQVPTYKNVYVVGDCAALPHAPSAQLAEVQGDQIADVLKKQWNHEPLPEKMPELKVQGFLGSLGEKKGFAYIMDRTVTGRLAHILKSGVLWLYKYHNG persistent 354 ndh Type II NADH:quinone oxidoreductase C,COG1252 WP_017175863.1 UPI00037018E9 UniRef100_A0A3S7GTS8,UniRef50_A0A239ZU84,UniRef90_Q4L4V3 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 25801 26046 . + . GCA_005502385.1_01781_gene GCA_005502385.1_01781 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFPLVEFCISNMAKGGDYVYDKLESDPEVDVLEYGCLNNCGLCSSGLYALVDGEVIEGDTPEDLLNNIYKHIEENDFTNLL . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 25801 26046 . + . GCA_005502385.1_01781_mRNA GCA_005502385.1_01781 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFPLVEFCISNMAKGGDYVYDKLESDPEVDVLEYGCLNNCGLCSSGLYALVDGEVIEGDTPEDLLNNIYKHIEENDFTNLL . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 25801 26046 . + 0 GCA_005502385.1_01781 GCA_005502385.1_01781_gene,GCA_005502385.1_01781_mRNA GCA_005502385.1_01781 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFPLVEFCISNMAKGGDYVYDKLESDPEVDVLEYGCLNNCGLCSSGLYALVDGEVIEGDTPEDLLNNIYKHIEENDFTNLL persistent 81 UPF0349 protein BUZ51_00655 WP_017175862.1 UPI0003730401 UniRef100_A0A3S7GTE8,UniRef50_A4ISE9,UniRef90_A0A974QPM0 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 26059 26418 . + . GCA_005502385.1_01782_gene GCA_005502385.1_01782 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MPTVTLTEAAAYEVKDMLKSNHMENGYLKIKVNGGGCTGLTYGMSAEEAPGSNDEVLEYYGLKVLVDKDDAPVLNGTKIDFKQSLMGGGFQIDNPNAIASCGCGSSFRTAKVAGHPENC . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 26059 26418 . + . GCA_005502385.1_01782_mRNA GCA_005502385.1_01782 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MPTVTLTEAAAYEVKDMLKSNHMENGYLKIKVNGGGCTGLTYGMSAEEAPGSNDEVLEYYGLKVLVDKDDAPVLNGTKIDFKQSLMGGGFQIDNPNAIASCGCGSSFRTAKVAGHPENC . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 26059 26418 . + 0 GCA_005502385.1_01782 GCA_005502385.1_01782_gene,GCA_005502385.1_01782_mRNA GCA_005502385.1_01782 Protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MPTVTLTEAAAYEVKDMLKSNHMENGYLKIKVNGGGCTGLTYGMSAEEAPGSNDEVLEYYGLKVLVDKDDAPVLNGTKIDFKQSLMGGGFQIDNPNAIASCGCGSSFRTAKVAGHPENC persistent 119 iscA FeS cluster biogenesis domain-containing protein COG0316,O WP_002448110.1 UPI00019FC600 UniRef100_A0A1K1XEJ7,UniRef50_A0A810E529,UniRef90_G5JHW3 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 26747 27955 . + . GCA_005502385.1_01783_gene GCA_005502385.1_01783 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAQNRKKVLVLGAGYAGLQAVTKLQKEVSANEAEITLVNKNKYHYEATWLHEASAGTLNYEDLIYPIESVIDKNKVNFINAEVTKIDRNAKKVETTHGIFEYDILVVALGFESETFGINGMKEHAFQIENIHTARELSRHIEDKFANYAASKEKDENDLAILVGGAGFTGIEFLGELTDRIPELCNKYGVDQNKVKITCVEAMPKILPMFSENLVNYVVNYLEERGVEFKIGTPIVACNEKGFKVKTNDQEQQLEANTAVWAAGVRGSQLMEESFEGVKRGRIVTKQDLTIDGHDDIFVIGDVSAFIPAGEERPLPTTAQIAMQQGAHVAKNIENILNGQATTDFEYIDRGTVCSLGSHDGVGHVFGRDITGKKAAFMKKVIDTRAVFKMGGVGLAFKKGKF . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 26747 27955 . + . GCA_005502385.1_01783_mRNA GCA_005502385.1_01783 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAQNRKKVLVLGAGYAGLQAVTKLQKEVSANEAEITLVNKNKYHYEATWLHEASAGTLNYEDLIYPIESVIDKNKVNFINAEVTKIDRNAKKVETTHGIFEYDILVVALGFESETFGINGMKEHAFQIENIHTARELSRHIEDKFANYAASKEKDENDLAILVGGAGFTGIEFLGELTDRIPELCNKYGVDQNKVKITCVEAMPKILPMFSENLVNYVVNYLEERGVEFKIGTPIVACNEKGFKVKTNDQEQQLEANTAVWAAGVRGSQLMEESFEGVKRGRIVTKQDLTIDGHDDIFVIGDVSAFIPAGEERPLPTTAQIAMQQGAHVAKNIENILNGQATTDFEYIDRGTVCSLGSHDGVGHVFGRDITGKKAAFMKKVIDTRAVFKMGGVGLAFKKGKF . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 26747 27955 . + 0 GCA_005502385.1_01783 GCA_005502385.1_01783_gene,GCA_005502385.1_01783_mRNA GCA_005502385.1_01783 NADH dehydrogenase-like protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAQNRKKVLVLGAGYAGLQAVTKLQKEVSANEAEITLVNKNKYHYEATWLHEASAGTLNYEDLIYPIESVIDKNKVNFINAEVTKIDRNAKKVETTHGIFEYDILVVALGFESETFGINGMKEHAFQIENIHTARELSRHIEDKFANYAASKEKDENDLAILVGGAGFTGIEFLGELTDRIPELCNKYGVDQNKVKITCVEAMPKILPMFSENLVNYVVNYLEERGVEFKIGTPIVACNEKGFKVKTNDQEQQLEANTAVWAAGVRGSQLMEESFEGVKRGRIVTKQDLTIDGHDDIFVIGDVSAFIPAGEERPLPTTAQIAMQQGAHVAKNIENILNGQATTDFEYIDRGTVCSLGSHDGVGHVFGRDITGKKAAFMKKVIDTRAVFKMGGVGLAFKKGKF persistent 402 Type II NADH:quinone oxidoreductase WP_017175861.1 UPI0002FF26BA UniRef100_A0A4Q9WMY7,UniRef50_Q2FZV7,UniRef90_A0A974L2D6 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 28055 29533 . + . GCA_005502385.1_01784_gene GCA_005502385.1_01784 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIHFNYNSNKMTDVIILGVPDYLNQIGKITYQNSDLTQTIENYRHRHIVSSQLGKTSSTILYINNEPKRLITVGLGNLKTLSYASFLKVFGTLFQYLKKERVTEANVLFDTFNSKQIDKTSIAEIFGLQSRQSIYEFNNYKSNKSTPYQLELFIESSNSDEDTKNIKAGYLIGESVNIARDFSNMPPNILTPEYFASEVAHHFKSSSVSVDIKNNDTLLSEGFGLLHAVGKGSTHPPVVITLTYHGTDKNEAPIALVGKGITYDSGGYSIKSKMGMQTMKFDMCGAANVVGMIDAVSKLSLPVNIVGVIVSAENMISQQAMKPDDVYTALSGETVEVLNSDAEGRLVLGDGVFYANQFQPRLICDFATLTGAAIAALGEDKAALFSSNADEDMKHILESAREVDEFAFELPITQTEQQLIRNTEVADLVNHTNGQGKALFAAAFVTHFSEQTPHIHFDIAGPATINKNNYKGPKGPTGSMIMTIVNWLRQSI . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 28055 29533 . + . GCA_005502385.1_01784_mRNA GCA_005502385.1_01784 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIHFNYNSNKMTDVIILGVPDYLNQIGKITYQNSDLTQTIENYRHRHIVSSQLGKTSSTILYINNEPKRLITVGLGNLKTLSYASFLKVFGTLFQYLKKERVTEANVLFDTFNSKQIDKTSIAEIFGLQSRQSIYEFNNYKSNKSTPYQLELFIESSNSDEDTKNIKAGYLIGESVNIARDFSNMPPNILTPEYFASEVAHHFKSSSVSVDIKNNDTLLSEGFGLLHAVGKGSTHPPVVITLTYHGTDKNEAPIALVGKGITYDSGGYSIKSKMGMQTMKFDMCGAANVVGMIDAVSKLSLPVNIVGVIVSAENMISQQAMKPDDVYTALSGETVEVLNSDAEGRLVLGDGVFYANQFQPRLICDFATLTGAAIAALGEDKAALFSSNADEDMKHILESAREVDEFAFELPITQTEQQLIRNTEVADLVNHTNGQGKALFAAAFVTHFSEQTPHIHFDIAGPATINKNNYKGPKGPTGSMIMTIVNWLRQSI . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 28055 29533 . + 0 GCA_005502385.1_01784 GCA_005502385.1_01784_gene,GCA_005502385.1_01784_mRNA GCA_005502385.1_01784 Cytosol aminopeptidase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIHFNYNSNKMTDVIILGVPDYLNQIGKITYQNSDLTQTIENYRHRHIVSSQLGKTSSTILYINNEPKRLITVGLGNLKTLSYASFLKVFGTLFQYLKKERVTEANVLFDTFNSKQIDKTSIAEIFGLQSRQSIYEFNNYKSNKSTPYQLELFIESSNSDEDTKNIKAGYLIGESVNIARDFSNMPPNILTPEYFASEVAHHFKSSSVSVDIKNNDTLLSEGFGLLHAVGKGSTHPPVVITLTYHGTDKNEAPIALVGKGITYDSGGYSIKSKMGMQTMKFDMCGAANVVGMIDAVSKLSLPVNIVGVIVSAENMISQQAMKPDDVYTALSGETVEVLNSDAEGRLVLGDGVFYANQFQPRLICDFATLTGAAIAALGEDKAALFSSNADEDMKHILESAREVDEFAFELPITQTEQQLIRNTEVADLVNHTNGQGKALFAAAFVTHFSEQTPHIHFDIAGPATINKNNYKGPKGPTGSMIMTIVNWLRQSI persistent 492 Leucyl aminopeptidase family protein WP_101804206.1 UPI0009D0E084 UniRef100_UPI0009D0E084,UniRef50_B9DIX2,UniRef90_A0A974L232 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 29728 31047 . + . GCA_005502385.1_01785_gene GCA_005502385.1_01785 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFNAVVIAVILMIILCLLRLNVIISLFISSLVGGLISGMSLNKVISVFGKNIVDGSEVALSYALLGGFAALISYSGITDYLVNKIIRAIHTENSRLSRIKVKVIIILVLLAMSIMSQNLIPVHIAFIPIVIPPLLSLFNDLKIDRRLIGLVIGFGLCWPYVLLPYGFGQIFHQIIQSGFQKAHHPIEFNMIWKAMLIPSLGYIVGLVIGLFVYRKPREYKQEVLKDNGEEIAEIRPYVLVVTIVAIFATFLVQTFTDSMIFGALAGVLIFFISGIYKWNELDSQFVEGIKIMSFIGVVILSANGFAGVMNATGDIEKLVSSLTEITNGHKLITIIAMYIVGLIVTLGIGSSFATIPIIAALFIPLGSSLGLDNMALIALVGTAAALGDSGSPASDSTLGPTAGLNVDGQHDHIRDTCIPNFLFYNVPLMIFGTIAAMVL . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 29728 31047 . + . GCA_005502385.1_01785_mRNA GCA_005502385.1_01785 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFNAVVIAVILMIILCLLRLNVIISLFISSLVGGLISGMSLNKVISVFGKNIVDGSEVALSYALLGGFAALISYSGITDYLVNKIIRAIHTENSRLSRIKVKVIIILVLLAMSIMSQNLIPVHIAFIPIVIPPLLSLFNDLKIDRRLIGLVIGFGLCWPYVLLPYGFGQIFHQIIQSGFQKAHHPIEFNMIWKAMLIPSLGYIVGLVIGLFVYRKPREYKQEVLKDNGEEIAEIRPYVLVVTIVAIFATFLVQTFTDSMIFGALAGVLIFFISGIYKWNELDSQFVEGIKIMSFIGVVILSANGFAGVMNATGDIEKLVSSLTEITNGHKLITIIAMYIVGLIVTLGIGSSFATIPIIAALFIPLGSSLGLDNMALIALVGTAAALGDSGSPASDSTLGPTAGLNVDGQHDHIRDTCIPNFLFYNVPLMIFGTIAAMVL . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 29728 31047 . + 0 GCA_005502385.1_01785 GCA_005502385.1_01785_gene,GCA_005502385.1_01785_mRNA GCA_005502385.1_01785 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFNAVVIAVILMIILCLLRLNVIISLFISSLVGGLISGMSLNKVISVFGKNIVDGSEVALSYALLGGFAALISYSGITDYLVNKIIRAIHTENSRLSRIKVKVIIILVLLAMSIMSQNLIPVHIAFIPIVIPPLLSLFNDLKIDRRLIGLVIGFGLCWPYVLLPYGFGQIFHQIIQSGFQKAHHPIEFNMIWKAMLIPSLGYIVGLVIGLFVYRKPREYKQEVLKDNGEEIAEIRPYVLVVTIVAIFATFLVQTFTDSMIFGALAGVLIFFISGIYKWNELDSQFVEGIKIMSFIGVVILSANGFAGVMNATGDIEKLVSSLTEITNGHKLITIIAMYIVGLIVTLGIGSSFATIPIIAALFIPLGSSLGLDNMALIALVGTAAALGDSGSPASDSTLGPTAGLNVDGQHDHIRDTCIPNFLFYNVPLMIFGTIAAMVL persistent 439 Na+/H+ antiporter family protein WP_017175859.1 UPI0002E8FE8A UniRef100_A0A3S7GY05,UniRef50_Q2FZV5,UniRef90_A0A3S7GY05 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 31066 31440 . + . GCA_005502385.1_01786_gene GCA_005502385.1_01786 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSNLLETFDMKIETVDEGIVVISMPVTDKVKQPFGYLHGGASIALGETACSLGAAHLIDTKHFIPLGLEMNANHIHSVKEGRVIATASIIHKGHTTQVWNIEIKSDQDKLISIMRGTIGIKPLK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 31066 31440 . + . GCA_005502385.1_01786_mRNA GCA_005502385.1_01786 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSNLLETFDMKIETVDEGIVVISMPVTDKVKQPFGYLHGGASIALGETACSLGAAHLIDTKHFIPLGLEMNANHIHSVKEGRVIATASIIHKGHTTQVWNIEIKSDQDKLISIMRGTIGIKPLK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 31066 31440 . + 0 GCA_005502385.1_01786 GCA_005502385.1_01786_gene,GCA_005502385.1_01786_mRNA GCA_005502385.1_01786 Putative esterase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSNLLETFDMKIETVDEGIVVISMPVTDKVKQPFGYLHGGASIALGETACSLGAAHLIDTKHFIPLGLEMNANHIHSVKEGRVIATASIIHKGHTTQVWNIEIKSDQDKLISIMRGTIGIKPLK persistent 124 paaI PaaI family thioesterase WP_017175858.1 UPI00030CCFAE UniRef100_A0A4Q9WNX7,UniRef50_A0A090LQF4,UniRef90_A0A657ZUJ7 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 31644 32375 . - . GCA_005502385.1_01787_gene GCA_005502385.1_01787 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDHTHAQIHNYHLNQSYIQSYVQRIEKNQRGWSITTSHHSVIQTDCVVLAQGCHNEPFVPAAFTQAKDVCHIFSDHFNSQLFSQSSHVIGSGISAAHLTLKVLKLDKNKIVHLWMNKNIDIQHFDADPGWLGPKKMKAFLNHSSHEEKLQTVLKERHKGSMPHELYLRLKKYVQNKRLIIHKEEIKDLKSHQIITENLNIPYDYILLATGFKSSTLQQPMIQSLIQNANAPSYLVDFQKSHMN . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 31644 32375 . - . GCA_005502385.1_01787_mRNA GCA_005502385.1_01787 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDHTHAQIHNYHLNQSYIQSYVQRIEKNQRGWSITTSHHSVIQTDCVVLAQGCHNEPFVPAAFTQAKDVCHIFSDHFNSQLFSQSSHVIGSGISAAHLTLKVLKLDKNKIVHLWMNKNIDIQHFDADPGWLGPKKMKAFLNHSSHEEKLQTVLKERHKGSMPHELYLRLKKYVQNKRLIIHKEEIKDLKSHQIITENLNIPYDYILLATGFKSSTLQQPMIQSLIQNANAPSYLVDFQKSHMN . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 31644 32375 . - 0 GCA_005502385.1_01787 GCA_005502385.1_01787_gene,GCA_005502385.1_01787_mRNA GCA_005502385.1_01787 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDHTHAQIHNYHLNQSYIQSYVQRIEKNQRGWSITTSHHSVIQTDCVVLAQGCHNEPFVPAAFTQAKDVCHIFSDHFNSQLFSQSSHVIGSGISAAHLTLKVLKLDKNKIVHLWMNKNIDIQHFDADPGWLGPKKMKAFLNHSSHEEKLQTVLKERHKGSMPHELYLRLKKYVQNKRLIIHKEEIKDLKSHQIITENLNIPYDYILLATGFKSSTLQQPMIQSLIQNANAPSYLVDFQKSHMN shell 243 hypothetical protein . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 32427 32657 . - . GCA_005502385.1_01788_gene GCA_005502385.1_01788 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MHRTIIGGGIQGTTIAIKLREVGMSIQNLTIIDPHDSLCEQFHKCTNRIAMPYLRSPIVHHIHPDPFHLKKFAKMN . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 32427 32657 . - . GCA_005502385.1_01788_mRNA GCA_005502385.1_01788 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MHRTIIGGGIQGTTIAIKLREVGMSIQNLTIIDPHDSLCEQFHKCTNRIAMPYLRSPIVHHIHPDPFHLKKFAKMN . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 32427 32657 . - 0 GCA_005502385.1_01788 GCA_005502385.1_01788_gene,GCA_005502385.1_01788_mRNA GCA_005502385.1_01788 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MHRTIIGGGIQGTTIAIKLREVGMSIQNLTIIDPHDSLCEQFHKCTNRIAMPYLRSPIVHHIHPDPFHLKKFAKMN shell 76 hypothetical protein . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 32767 33123 . - . GCA_005502385.1_01789_gene GCA_005502385.1_01789 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIAKIVISLAIIFIILGALISAITAIGIIRLKDVYSRGHAAGKSATLGAIFLLFGTFLYFIGTEGYANMQLIFGIIFILITGPLSSHLMMKASYNNKTPYTKDTKIDELKDEFNNKKI . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 32767 33123 . - . GCA_005502385.1_01789_mRNA GCA_005502385.1_01789 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIAKIVISLAIIFIILGALISAITAIGIIRLKDVYSRGHAAGKSATLGAIFLLFGTFLYFIGTEGYANMQLIFGIIFILITGPLSSHLMMKASYNNKTPYTKDTKIDELKDEFNNKKI . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 32767 33123 . - 0 GCA_005502385.1_01789 GCA_005502385.1_01789_gene,GCA_005502385.1_01789_mRNA GCA_005502385.1_01789 Na(+)/H(+) antiporter subunit G1 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIAKIVISLAIIFIILGALISAITAIGIIRLKDVYSRGHAAGKSATLGAIFLLFGTFLYFIGTEGYANMQLIFGIIFILITGPLSSHLMMKASYNNKTPYTKDTKIDELKDEFNNKKI persistent 118 Na+/H+ antiporter subunit G1 WP_002448137.1 UPI00019FC606 UniRef100_A0A974KYP3,UniRef50_Q2G2H9,UniRef90_A0A974KYP3 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 33101 33391 . - . GCA_005502385.1_01790_gene GCA_005502385.1_01790 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MVKIIIIIALIVVVLSMLAMFIRIIKGPTLPDRVLALDAIGLQLMACVALYSVFIGSQYLLVVILLIGILAFLGTAVFSKFIDKGKVIERDSKNRH . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 33101 33391 . - . GCA_005502385.1_01790_mRNA GCA_005502385.1_01790 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MVKIIIIIALIVVVLSMLAMFIRIIKGPTLPDRVLALDAIGLQLMACVALYSVFIGSQYLLVVILLIGILAFLGTAVFSKFIDKGKVIERDSKNRH . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 33101 33391 . - 0 GCA_005502385.1_01790 GCA_005502385.1_01790_gene,GCA_005502385.1_01790_mRNA GCA_005502385.1_01790 Na(+)/H(+) antiporter subunit F1 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MVKIIIIIALIVVVLSMLAMFIRIIKGPTLPDRVLALDAIGLQLMACVALYSVFIGSQYLLVVILLIGILAFLGTAVFSKFIDKGKVIERDSKNRH persistent 96 Na(+)/H(+) antiporter subunit F1 WP_070436477.1 UPI0008A5B85F UniRef100_A0AAE5MYX5,UniRef50_Q2G2H6,UniRef90_A0A657ZVT0 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 33391 33870 . - . GCA_005502385.1_01791_gene GCA_005502385.1_01791 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MALQFVLNIILAIIWMFLSGSYTFNNFLLGFLIGIGLVYLFKKVLPGSFYLKRVYKVIKLIVVFFIELMKANIDVSKIVLQPRLKNQPGFFIYHTDLKHDWQIVLLSNLITLTPGTVVLGISDDRTKIYIHSIDFSTKEEEVESIKSSLEKVVREVGEA . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 33391 33870 . - . GCA_005502385.1_01791_mRNA GCA_005502385.1_01791 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MALQFVLNIILAIIWMFLSGSYTFNNFLLGFLIGIGLVYLFKKVLPGSFYLKRVYKVIKLIVVFFIELMKANIDVSKIVLQPRLKNQPGFFIYHTDLKHDWQIVLLSNLITLTPGTVVLGISDDRTKIYIHSIDFSTKEEEVESIKSSLEKVVREVGEA . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 33391 33870 . - 0 GCA_005502385.1_01791 GCA_005502385.1_01791_gene,GCA_005502385.1_01791_mRNA GCA_005502385.1_01791 Na(+)/H(+) antiporter subunit E1 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MALQFVLNIILAIIWMFLSGSYTFNNFLLGFLIGIGLVYLFKKVLPGSFYLKRVYKVIKLIVVFFIELMKANIDVSKIVLQPRLKNQPGFFIYHTDLKHDWQIVLLSNLITLTPGTVVLGISDDRTKIYIHSIDFSTKEEEVESIKSSLEKVVREVGEA persistent 159 Na+/H+ antiporter subunit E WP_002448220.1 UPI00019FC608 UniRef100_A0A657ZUT1,UniRef50_Q2G2H8,UniRef90_A0A657ZUT1 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 33870 35369 . - . GCA_005502385.1_01792_gene GCA_005502385.1_01792 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIATNMVVLTLVIPIITAIILIFLGQRYPLKRAVTLIGLVLTLIVAMVNLINVSKFGPLKVELGSWPAPYGIIFLLDTLGAMLIVTSIIITLLITIYSFSTAGIDRERYYFHFSIVFMLVGIIGAFTTGDIFNLFVFFEVFLMSSYALLVLGGTRIQLQETVKYLLINVVTSTFFVIAVGILYSIVGTLNMADISVKLNELSHSHQGLLSIVFILFIFVFATKAGVFPLYVWLPGSYYAPPFAIIAFFGALLTKVGVYAILRTLSLFFHNTMSFSHYTILFLALLTIIFGSIGAIAYYDIKKIILYNIMIAVGVILVGVAMMSKLGIIGAIYYTIHDMLVKSALFLIIGVMYQITKTSNLKSFGGLIKTYPILGWSFFIAALSLAGIPPFSGFYGKYFIVKAAFEKGFYISAIIVLLSSLIVLYSVIRIFLHGFFGEPKGYKMNNKVNVKQATIVSVIAVVITVLFGLSADALYPFISEAAKSFYDPNVYIKSVLGGRY . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 33870 35369 . - . GCA_005502385.1_01792_mRNA GCA_005502385.1_01792 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIATNMVVLTLVIPIITAIILIFLGQRYPLKRAVTLIGLVLTLIVAMVNLINVSKFGPLKVELGSWPAPYGIIFLLDTLGAMLIVTSIIITLLITIYSFSTAGIDRERYYFHFSIVFMLVGIIGAFTTGDIFNLFVFFEVFLMSSYALLVLGGTRIQLQETVKYLLINVVTSTFFVIAVGILYSIVGTLNMADISVKLNELSHSHQGLLSIVFILFIFVFATKAGVFPLYVWLPGSYYAPPFAIIAFFGALLTKVGVYAILRTLSLFFHNTMSFSHYTILFLALLTIIFGSIGAIAYYDIKKIILYNIMIAVGVILVGVAMMSKLGIIGAIYYTIHDMLVKSALFLIIGVMYQITKTSNLKSFGGLIKTYPILGWSFFIAALSLAGIPPFSGFYGKYFIVKAAFEKGFYISAIIVLLSSLIVLYSVIRIFLHGFFGEPKGYKMNNKVNVKQATIVSVIAVVITVLFGLSADALYPFISEAAKSFYDPNVYIKSVLGGRY . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 33870 35369 . - 0 GCA_005502385.1_01792 GCA_005502385.1_01792_gene,GCA_005502385.1_01792_mRNA GCA_005502385.1_01792 Na(+)/H(+) antiporter subunit D1 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIATNMVVLTLVIPIITAIILIFLGQRYPLKRAVTLIGLVLTLIVAMVNLINVSKFGPLKVELGSWPAPYGIIFLLDTLGAMLIVTSIIITLLITIYSFSTAGIDRERYYFHFSIVFMLVGIIGAFTTGDIFNLFVFFEVFLMSSYALLVLGGTRIQLQETVKYLLINVVTSTFFVIAVGILYSIVGTLNMADISVKLNELSHSHQGLLSIVFILFIFVFATKAGVFPLYVWLPGSYYAPPFAIIAFFGALLTKVGVYAILRTLSLFFHNTMSFSHYTILFLALLTIIFGSIGAIAYYDIKKIILYNIMIAVGVILVGVAMMSKLGIIGAIYYTIHDMLVKSALFLIIGVMYQITKTSNLKSFGGLIKTYPILGWSFFIAALSLAGIPPFSGFYGKYFIVKAAFEKGFYISAIIVLLSSLIVLYSVIRIFLHGFFGEPKGYKMNNKVNVKQATIVSVIAVVITVLFGLSADALYPFISEAAKSFYDPNVYIKSVLGGRY persistent 499 Na+/H+ antiporter subunit D GO:0008137,GO:0015297,GO:0042773 WP_002455550.1 UPI0001EF52A1 UniRef100_UPI0001EF52A1,UniRef50_Q2G2H7,UniRef90_A0A8X8KI57 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 35356 35703 . - . GCA_005502385.1_01793_gene GCA_005502385.1_01793 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MEIIMIIVCGILTSISVYLVLSKSLIRIIMGTTLITHASNLFLITMGGLKHGEMPIYEKDIHHYVDPIPHALILTAIVIAFATTAFFLVLAFRTYKELGTDNIEQMKGVPSDDSN . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 35356 35703 . - . GCA_005502385.1_01793_mRNA GCA_005502385.1_01793 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MEIIMIIVCGILTSISVYLVLSKSLIRIIMGTTLITHASNLFLITMGGLKHGEMPIYEKDIHHYVDPIPHALILTAIVIAFATTAFFLVLAFRTYKELGTDNIEQMKGVPSDDSN . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 35356 35703 . - 0 GCA_005502385.1_01793 GCA_005502385.1_01793_gene,GCA_005502385.1_01793_mRNA GCA_005502385.1_01793 Na(+)/H(+) antiporter subunit C1 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MEIIMIIVCGILTSISVYLVLSKSLIRIIMGTTLITHASNLFLITMGGLKHGEMPIYEKDIHHYVDPIPHALILTAIVIAFATTAFFLVLAFRTYKELGTDNIEQMKGVPSDDSN persistent 115 mnhC1 Na+/H+ antiporter Mnh1 subunit C GO:0005886,GO:0006812,GO:0006814,GO:0008324,GO:0015297,GO:1902600 COG1006,P WP_002448250.1 UPI00019FC60A UniRef100_A0A1L8Y4M5,UniRef50_O05260,UniRef90_Q4L4W5 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 35703 36131 . - . GCA_005502385.1_01794_gene GCA_005502385.1_01794 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNRQNNNLMFQYSAVIIAFLIALFGITLFLAGHYTPGGGFVGGLLLSTALTIIMIAFDIKTMRKIFPWDFKILIGIGLLFCVSTPIASWFYGKNFFTHTEFNIPLPFLHPVHMNTPMFFDFGVMCAVIGTVMTIIITIGENE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 35703 36131 . - . GCA_005502385.1_01794_mRNA GCA_005502385.1_01794 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNRQNNNLMFQYSAVIIAFLIALFGITLFLAGHYTPGGGFVGGLLLSTALTIIMIAFDIKTMRKIFPWDFKILIGIGLLFCVSTPIASWFYGKNFFTHTEFNIPLPFLHPVHMNTPMFFDFGVMCAVIGTVMTIIITIGENE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 35703 36131 . - 0 GCA_005502385.1_01794 GCA_005502385.1_01794_gene,GCA_005502385.1_01794_mRNA GCA_005502385.1_01794 Na(+)/H(+) antiporter subunit B1 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNRQNNNLMFQYSAVIIAFLIALFGITLFLAGHYTPGGGFVGGLLLSTALTIIMIAFDIKTMRKIFPWDFKILIGIGLLFCVSTPIASWFYGKNFFTHTEFNIPLPFLHPVHMNTPMFFDFGVMCAVIGTVMTIIITIGENE persistent 142 Na(+)/H(+) antiporter subunit B1 WP_070436476.1 UPI0008A502E2 UniRef100_UPI0008A502E2,UniRef50_Q5HQL1,UniRef90_A0A533J177 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 36124 38526 . - . GCA_005502385.1_01795_gene GCA_005502385.1_01795 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSLIHIAVLLPLIFALIIPILYRFFKKIHLGWFVLPVPVVLFIYFLSYISTTQSGNTVIKTFNWMPHIGMNFDIYLDGLSILFSLLITGIGSLVVLYSIGYLDKSERLGNFYCYLLLFMGAMLGVVLSDNIIILYLFWELTSFSSFLLISFWREKKASIYGAQKSLIITVFGGLSLLGGLILISLAGQSLSLHYLIHHVSQIQDSAFFTLAMVLIMLAAFTKSAQVPFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLVARLTPLFAISEGWIWTITLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMSMLGIGAISYHFEGSDSQLYIAGFTAAAFHLINHATFKGALFMITGAIDHVTGTRDVKKLGGLLTIMPISFTLTVITALSMAGVPPFNGFLSKEKFLEAMIEATHTPLFSLNTLGIVFPILAIVGSIFTFVYSIKFVLHVFFGKYHSDLLPKKAHEASLLMLISPAILATLVVVFGLFPGLLTHSIIEPATKAISGISTVHAEFHMFHGITPAFISTLTIWIVGIILLFTFNYWIRLLKAQPDNLKLNYWYDTTGKWLPNHSASLTNYYVNGYVRDSLVFIFGTLIVLTLITLVSVPFSFNFKNINTIHIYEMIIIIILTISAFLVVTATSRLFSIIMLSVVGYAVSVLFVFFKAPDLALTQFVVESISTGLFLLCFYHLPNLNRYNEKTSFKLTNAIISIGVGLAVTMLGLIAYGNRHFSSIGEYYKAHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMIKLRSKRNKTSEVESNE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 36124 38526 . - . GCA_005502385.1_01795_mRNA GCA_005502385.1_01795 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSLIHIAVLLPLIFALIIPILYRFFKKIHLGWFVLPVPVVLFIYFLSYISTTQSGNTVIKTFNWMPHIGMNFDIYLDGLSILFSLLITGIGSLVVLYSIGYLDKSERLGNFYCYLLLFMGAMLGVVLSDNIIILYLFWELTSFSSFLLISFWREKKASIYGAQKSLIITVFGGLSLLGGLILISLAGQSLSLHYLIHHVSQIQDSAFFTLAMVLIMLAAFTKSAQVPFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLVARLTPLFAISEGWIWTITLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMSMLGIGAISYHFEGSDSQLYIAGFTAAAFHLINHATFKGALFMITGAIDHVTGTRDVKKLGGLLTIMPISFTLTVITALSMAGVPPFNGFLSKEKFLEAMIEATHTPLFSLNTLGIVFPILAIVGSIFTFVYSIKFVLHVFFGKYHSDLLPKKAHEASLLMLISPAILATLVVVFGLFPGLLTHSIIEPATKAISGISTVHAEFHMFHGITPAFISTLTIWIVGIILLFTFNYWIRLLKAQPDNLKLNYWYDTTGKWLPNHSASLTNYYVNGYVRDSLVFIFGTLIVLTLITLVSVPFSFNFKNINTIHIYEMIIIIILTISAFLVVTATSRLFSIIMLSVVGYAVSVLFVFFKAPDLALTQFVVESISTGLFLLCFYHLPNLNRYNEKTSFKLTNAIISIGVGLAVTMLGLIAYGNRHFSSIGEYYKAHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMIKLRSKRNKTSEVESNE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 36124 38526 . - 0 GCA_005502385.1_01795 GCA_005502385.1_01795_gene,GCA_005502385.1_01795_mRNA GCA_005502385.1_01795 Na(+)/H(+) antiporter subunit A1 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSLIHIAVLLPLIFALIIPILYRFFKKIHLGWFVLPVPVVLFIYFLSYISTTQSGNTVIKTFNWMPHIGMNFDIYLDGLSILFSLLITGIGSLVVLYSIGYLDKSERLGNFYCYLLLFMGAMLGVVLSDNIIILYLFWELTSFSSFLLISFWREKKASIYGAQKSLIITVFGGLSLLGGLILISLAGQSLSLHYLIHHVSQIQDSAFFTLAMVLIMLAAFTKSAQVPFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLVARLTPLFAISEGWIWTITLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMSMLGIGAISYHFEGSDSQLYIAGFTAAAFHLINHATFKGALFMITGAIDHVTGTRDVKKLGGLLTIMPISFTLTVITALSMAGVPPFNGFLSKEKFLEAMIEATHTPLFSLNTLGIVFPILAIVGSIFTFVYSIKFVLHVFFGKYHSDLLPKKAHEASLLMLISPAILATLVVVFGLFPGLLTHSIIEPATKAISGISTVHAEFHMFHGITPAFISTLTIWIVGIILLFTFNYWIRLLKAQPDNLKLNYWYDTTGKWLPNHSASLTNYYVNGYVRDSLVFIFGTLIVLTLITLVSVPFSFNFKNINTIHIYEMIIIIILTISAFLVVTATSRLFSIIMLSVVGYAVSVLFVFFKAPDLALTQFVVESISTGLFLLCFYHLPNLNRYNEKTSFKLTNAIISIGVGLAVTMLGLIAYGNRHFSSIGEYYKAHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMIKLRSKRNKTSEVESNE persistent 800 Na+/H+ antiporter subunit A GO:0051139,GO:0098662 UniRef50_Q9K2S2,UniRef90_A0A3S7GTD7 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 38659 39039 . - . GCA_005502385.1_01796_gene GCA_005502385.1_01796 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLYRFSHKTGTYGVTIKEDSDHQVLVQIEQVIKHPKQGDLHHPGETEGVFFHERRALSHYEKRYATRSQLRDFNVEEMKYEDSLQQAITKMENELKQQHTEYAKLALDNLNSLKKDYSIQYKQNFF . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 38659 39039 . - . GCA_005502385.1_01796_mRNA GCA_005502385.1_01796 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLYRFSHKTGTYGVTIKEDSDHQVLVQIEQVIKHPKQGDLHHPGETEGVFFHERRALSHYEKRYATRSQLRDFNVEEMKYEDSLQQAITKMENELKQQHTEYAKLALDNLNSLKKDYSIQYKQNFF . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 38659 39039 . - 0 GCA_005502385.1_01796 GCA_005502385.1_01796_gene,GCA_005502385.1_01796_mRNA GCA_005502385.1_01796 Kinase-associated lipoprotein B GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLYRFSHKTGTYGVTIKEDSDHQVLVQIEQVIKHPKQGDLHHPGETEGVFFHERRALSHYEKRYATRSQLRDFNVEEMKYEDSLQQAITKMENELKQQHTEYAKLALDNLNSLKKDYSIQYKQNFF persistent 126 Kinase WP_002448064.1 UPI00019FC6C4 UniRef100_A0A4V2KY05,UniRef50_A0A0M2NU22,UniRef90_A0A4V2KY05 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 39108 39710 . + . GCA_005502385.1_01797_gene GCA_005502385.1_01797 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTNYPQLNKEIQDNEIKVIMHTNKGDMTFKLFPEIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGSFEDEFSLEAFNLYGALSMANAGPNTNGSQFFVVQMKEVPDTMLNQLVDGGWPEPIAKAYAEKGGTPWLDQKHTVFGQLIDGETTLEDIANTKVGAQDKPVHDVVIESIDVEDKKA . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 39108 39710 . + . GCA_005502385.1_01797_mRNA GCA_005502385.1_01797 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTNYPQLNKEIQDNEIKVIMHTNKGDMTFKLFPEIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGSFEDEFSLEAFNLYGALSMANAGPNTNGSQFFVVQMKEVPDTMLNQLVDGGWPEPIAKAYAEKGGTPWLDQKHTVFGQLIDGETTLEDIANTKVGAQDKPVHDVVIESIDVEDKKA . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 39108 39710 . + 0 GCA_005502385.1_01797 GCA_005502385.1_01797_gene,GCA_005502385.1_01797_mRNA GCA_005502385.1_01797 Putative peptidyl-prolyl cis-trans isomerase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTNYPQLNKEIQDNEIKVIMHTNKGDMTFKLFPEIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGSFEDEFSLEAFNLYGALSMANAGPNTNGSQFFVVQMKEVPDTMLNQLVDGGWPEPIAKAYAEKGGTPWLDQKHTVFGQLIDGETTLEDIANTKVGAQDKPVHDVVIESIDVEDKKA persistent 200 ppiB Putative peptidyl-prolyl cis-trans isomerase 5.2.1.8 GO:0140839,GO:0140840 COG0652,O WP_017175849.1 UPI00031F0E40 UniRef100_A0A4Q9WN27,UniRef50_Q49W93,UniRef90_Q4L4W9 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 39938 40321 . + . GCA_005502385.1_01798_gene GCA_005502385.1_01798 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNTHYKEGQHIKVRVTGIQPYGAFVETPDHTEGLIHISEIMDDYVHNLKKFLSEGQIVKAKILSIDDEGKLNLSLKDNDYFKNYERKKEKQSVLDEIKETEKYGFQTLEERLPVWIKQSKRAIRNNN . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 39938 40321 . + . GCA_005502385.1_01798_mRNA GCA_005502385.1_01798 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNTHYKEGQHIKVRVTGIQPYGAFVETPDHTEGLIHISEIMDDYVHNLKKFLSEGQIVKAKILSIDDEGKLNLSLKDNDYFKNYERKKEKQSVLDEIKETEKYGFQTLEERLPVWIKQSKRAIRNNN . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 39938 40321 . + 0 GCA_005502385.1_01798 GCA_005502385.1_01798_gene,GCA_005502385.1_01798_mRNA GCA_005502385.1_01798 General stress protein 13 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNTHYKEGQHIKVRVTGIQPYGAFVETPDHTEGLIHISEIMDDYVHNLKKFLSEGQIVKAKILSIDDEGKLNLSLKDNDYFKNYERKKEKQSVLDEIKETEKYGFQTLEERLPVWIKQSKRAIRNNN persistent 127 ygs S1 domain-containing post-transcriptional regulator Ygs COG1098,R WP_002455545.1 UPI0001EF529C UniRef100_A0A1L8Y4M2,UniRef50_B9DIU9,UniRef90_A0A1L8Y4M2 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 40496 41623 . + . GCA_005502385.1_01799_gene GCA_005502385.1_01799 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNNKYKKLFETVTLPNGVSLRNRFVLAPLTHTSSNDDGTISDVEISYIEKRAKDVGLAINAASNVNDIGKAFPGQPSVAHDSDIEGLKRLATAMKKNGAKALVQIHHGGAQALPELTPNGDVVAPSPVSMKSFGQQQEHHAREITTEEIEQTIKDFGEATRRAIEAGFDGVEIHGANHYLIHQFFSPYYNRREDEWGDHLKFPLAVIDEVLKVKETYANKDFIVGYRLSPEEAESPGISMEHTEKLIKTITKKAIDYVHISIMDIHSQTREGKYEGEERLKLIHQWVDGRMPVIGIGSVFTADDALDAVESTGIELVALGRGILLDYNFIHKIEEGKEEEIISYFDPNREDKHALPPNLWEQFNKGFYPLPRKDK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 40496 41623 . + . GCA_005502385.1_01799_mRNA GCA_005502385.1_01799 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNNKYKKLFETVTLPNGVSLRNRFVLAPLTHTSSNDDGTISDVEISYIEKRAKDVGLAINAASNVNDIGKAFPGQPSVAHDSDIEGLKRLATAMKKNGAKALVQIHHGGAQALPELTPNGDVVAPSPVSMKSFGQQQEHHAREITTEEIEQTIKDFGEATRRAIEAGFDGVEIHGANHYLIHQFFSPYYNRREDEWGDHLKFPLAVIDEVLKVKETYANKDFIVGYRLSPEEAESPGISMEHTEKLIKTITKKAIDYVHISIMDIHSQTREGKYEGEERLKLIHQWVDGRMPVIGIGSVFTADDALDAVESTGIELVALGRGILLDYNFIHKIEEGKEEEIISYFDPNREDKHALPPNLWEQFNKGFYPLPRKDK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 40496 41623 . + 0 GCA_005502385.1_01799 GCA_005502385.1_01799_gene,GCA_005502385.1_01799_mRNA GCA_005502385.1_01799 putative oxidoreductase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNNKYKKLFETVTLPNGVSLRNRFVLAPLTHTSSNDDGTISDVEISYIEKRAKDVGLAINAASNVNDIGKAFPGQPSVAHDSDIEGLKRLATAMKKNGAKALVQIHHGGAQALPELTPNGDVVAPSPVSMKSFGQQQEHHAREITTEEIEQTIKDFGEATRRAIEAGFDGVEIHGANHYLIHQFFSPYYNRREDEWGDHLKFPLAVIDEVLKVKETYANKDFIVGYRLSPEEAESPGISMEHTEKLIKTITKKAIDYVHISIMDIHSQTREGKYEGEERLKLIHQWVDGRMPVIGIGSVFTADDALDAVESTGIELVALGRGILLDYNFIHKIEEGKEEEIISYFDPNREDKHALPPNLWEQFNKGFYPLPRKDK persistent 375 NADH-dependent flavin oxidoreductase WP_017175848.1 UPI00031530D2 UniRef100_A0A4Q9WP62,UniRef50_S2YL03,UniRef90_A0A4Q9W025 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 41892 43082 . + . GCA_005502385.1_01800_gene GCA_005502385.1_01800 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTKSEKIIELTNHYGAHNYVPLPIVVSEAEGIWVTDPEGNKYIDMLSAYSAVNQGHRHPKIIQALKHQADKVTLVSRAFHSDNLGEWYEKICKLAGKDKALPMNTGAEAVETALKAARRWAYDVKGIEPNQAEIIAFNGNFHGRTMAPVSLSSEAEYQRGYGPLLDGFRKVDFGNETQLKEAINKNTAAVLVEPIQGEAGINIPPEGYLKTIRDLCNEHNILFIADEIQAGLGRSGKLFACDWDNVKPDVYILGKALGGGVLPISVVLADNEVLDVFTPGSHGSTFGGNPLACAVSIAALDVIIDENLPEHSNELGEYFKSELQKINHPAIKEVRGRGLFIGVELHESARPFCEALKEKGLLCKETHDAVIRFAPPLVITKEELDEALNRIRSVFE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 41892 43082 . + . GCA_005502385.1_01800_mRNA GCA_005502385.1_01800 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTKSEKIIELTNHYGAHNYVPLPIVVSEAEGIWVTDPEGNKYIDMLSAYSAVNQGHRHPKIIQALKHQADKVTLVSRAFHSDNLGEWYEKICKLAGKDKALPMNTGAEAVETALKAARRWAYDVKGIEPNQAEIIAFNGNFHGRTMAPVSLSSEAEYQRGYGPLLDGFRKVDFGNETQLKEAINKNTAAVLVEPIQGEAGINIPPEGYLKTIRDLCNEHNILFIADEIQAGLGRSGKLFACDWDNVKPDVYILGKALGGGVLPISVVLADNEVLDVFTPGSHGSTFGGNPLACAVSIAALDVIIDENLPEHSNELGEYFKSELQKINHPAIKEVRGRGLFIGVELHESARPFCEALKEKGLLCKETHDAVIRFAPPLVITKEELDEALNRIRSVFE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 41892 43082 . + 0 GCA_005502385.1_01800 GCA_005502385.1_01800_gene,GCA_005502385.1_01800_mRNA GCA_005502385.1_01800 Ornithine aminotransferase 2 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTKSEKIIELTNHYGAHNYVPLPIVVSEAEGIWVTDPEGNKYIDMLSAYSAVNQGHRHPKIIQALKHQADKVTLVSRAFHSDNLGEWYEKICKLAGKDKALPMNTGAEAVETALKAARRWAYDVKGIEPNQAEIIAFNGNFHGRTMAPVSLSSEAEYQRGYGPLLDGFRKVDFGNETQLKEAINKNTAAVLVEPIQGEAGINIPPEGYLKTIRDLCNEHNILFIADEIQAGLGRSGKLFACDWDNVKPDVYILGKALGGGVLPISVVLADNEVLDVFTPGSHGSTFGGNPLACAVSIAALDVIIDENLPEHSNELGEYFKSELQKINHPAIKEVRGRGLFIGVELHESARPFCEALKEKGLLCKETHDAVIRFAPPLVITKEELDEALNRIRSVFE persistent 396 ornithine--oxo-acid transaminase 2.6.1.13 GO:0004587,GO:0030170 WP_017175847.1 UPI0002E2FD7C UniRef100_A0A8X8GQC0,UniRef50_P38021,UniRef90_A0A2K0A987 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 43191 44435 . + . GCA_005502385.1_01801_gene GCA_005502385.1_01801 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTENNNLVTSTQSIIKEALHKLGFDDGMYDLIKEPLRFLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPTKDIPAPDVFTNSQIMAWMMDEYSALDKFNSPGFITGKPIVLGGSQGRDRSTALGVVIAIEQAAKRRGKEIKGSRIVIQGFGNAGSFLAKFLNDMGAKVVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFEDTISNKELFELDCDILVPAAISNQITEDNAHDIKADIVVEAANGPTTPEATRILTERGVLLVPDVLASAGGVTVSYFEWVQNNQGYYWSEDEVNEKLREKLIEAFDTIYELAQNRKIDMRLAAYIVGIKRTAEAARYRGWA . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 43191 44435 . + . GCA_005502385.1_01801_mRNA GCA_005502385.1_01801 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTENNNLVTSTQSIIKEALHKLGFDDGMYDLIKEPLRFLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPTKDIPAPDVFTNSQIMAWMMDEYSALDKFNSPGFITGKPIVLGGSQGRDRSTALGVVIAIEQAAKRRGKEIKGSRIVIQGFGNAGSFLAKFLNDMGAKVVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFEDTISNKELFELDCDILVPAAISNQITEDNAHDIKADIVVEAANGPTTPEATRILTERGVLLVPDVLASAGGVTVSYFEWVQNNQGYYWSEDEVNEKLREKLIEAFDTIYELAQNRKIDMRLAAYIVGIKRTAEAARYRGWA . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 43191 44435 . + 0 GCA_005502385.1_01801 GCA_005502385.1_01801_gene,GCA_005502385.1_01801_mRNA GCA_005502385.1_01801 NAD-specific glutamate dehydrogenase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTENNNLVTSTQSIIKEALHKLGFDDGMYDLIKEPLRFLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPTKDIPAPDVFTNSQIMAWMMDEYSALDKFNSPGFITGKPIVLGGSQGRDRSTALGVVIAIEQAAKRRGKEIKGSRIVIQGFGNAGSFLAKFLNDMGAKVVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFEDTISNKELFELDCDILVPAAISNQITEDNAHDIKADIVVEAANGPTTPEATRILTERGVLLVPDVLASAGGVTVSYFEWVQNNQGYYWSEDEVNEKLREKLIEAFDTIYELAQNRKIDMRLAAYIVGIKRTAEAARYRGWA persistent 414 gluD NAD-specific glutamate dehydrogenase 1.4.1.2 GO:0004352,GO:0006520,GO:0006538 COG0334,E WP_017175846.1 UPI00031D3D8A UniRef100_A0A8X8KI47,UniRef50_P39633,UniRef90_Q5HHC7 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 44524 45537 . - . GCA_005502385.1_01802_gene GCA_005502385.1_01802 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKVSKKAMISSLAIATIGLVTLHNPVEANNNHNNYSTTSNSAAEHQQFNQSQNKYTSVAISKHRNQDHSNWMTNLTGERFTTIAHRGASGYAPEHTFHAYDKSHNELGASYIELDLQRTKDGQLVAMHDETVDRTTNGTGRVEDYTLAQLKQLDAGSWFNNAHPEYAKPEYKNAKVPTLDEILSRYGTKANYYIETKNPNVYPGMEEQLLETLKKHHMLTGNSLNHGHILIQSFSEESLQKMHQLDSRVPLIRLLDKNELQQQSEADLQHILSYAIGVGPDYTSLNAENTKHLKDLGFLIHPYTVDKTTDMQRLNQYGVDGLFTNFADKYKATIPNE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 44524 45537 . - . GCA_005502385.1_01802_mRNA GCA_005502385.1_01802 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKVSKKAMISSLAIATIGLVTLHNPVEANNNHNNYSTTSNSAAEHQQFNQSQNKYTSVAISKHRNQDHSNWMTNLTGERFTTIAHRGASGYAPEHTFHAYDKSHNELGASYIELDLQRTKDGQLVAMHDETVDRTTNGTGRVEDYTLAQLKQLDAGSWFNNAHPEYAKPEYKNAKVPTLDEILSRYGTKANYYIETKNPNVYPGMEEQLLETLKKHHMLTGNSLNHGHILIQSFSEESLQKMHQLDSRVPLIRLLDKNELQQQSEADLQHILSYAIGVGPDYTSLNAENTKHLKDLGFLIHPYTVDKTTDMQRLNQYGVDGLFTNFADKYKATIPNE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 44524 45537 . - 0 GCA_005502385.1_01802 GCA_005502385.1_01802_gene,GCA_005502385.1_01802_mRNA GCA_005502385.1_01802 hypothetical protein """""" GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKVSKKAMISSLAIATIGLVTLHNPVEANNNHNNYSTTSNSAAEHQQFNQSQNKYTSVAISKHRNQDHSNWMTNLTGERFTTIAHRGASGYAPEHTFHAYDKSHNELGASYIELDLQRTKDGQLVAMHDETVDRTTNGTGRVEDYTLAQLKQLDAGSWFNNAHPEYAKPEYKNAKVPTLDEILSRYGTKANYYIETKNPNVYPGMEEQLLETLKKHHMLTGNSLNHGHILIQSFSEESLQKMHQLDSRVPLIRLLDKNELQQQSEADLQHILSYAIGVGPDYTSLNAENTKHLKDLGFLIHPYTVDKTTDMQRLNQYGVDGLFTNFADKYKATIPNE persistent 337 Glycerophosphodiester phosphodiesterase 3.1.4.46 WP_017175845.1 UPI0002E5130C UniRef100_A0A3S7GTR2,UniRef50_A0A380G390,UniRef90_A0A3S7GTR2 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 46012 47388 . - . GCA_005502385.1_01803_gene GCA_005502385.1_01803 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSNKAWGGRFQQQPEEWVDAFNASIDFDQTLLDEDIQGSIAHATMLAHQNIISEEEKNAIVKGLKDIQADFHNHNIEFKHALEDIHLNIEHELIQRIGDPGGKLHTGRSRNDQVATDLHLYVKKQVIEIQALIRSFQESILTLAKSHVETIMPGYTHLQRAQPISFAHHIMTYFWMLERDYTRFADSLKRIDISPLGAAALSGTTHPIDRHETQELLGFEYIYENSLDAVSDRDYIIETLHNISLTMTHLSRFAEEIIFWSTDEAKFITLSDAFSTGSSIMPQKKNPDMAELIRGKVGRTTGHLMSMLVTLKGLPLAYNKDLQEDKEGLFDSVRTIKGSLRIFEGMLNTLTVNTNRLNETVHQDFSNATELADYLVDKNVPFRTAHEIVGKIVFECIQQGIYLLDVPFEHYQELNDKIEEDVYDYLKPENCLNRRKSYGSTGQDAVRHQLNVAENILK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 46012 47388 . - . GCA_005502385.1_01803_mRNA GCA_005502385.1_01803 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSNKAWGGRFQQQPEEWVDAFNASIDFDQTLLDEDIQGSIAHATMLAHQNIISEEEKNAIVKGLKDIQADFHNHNIEFKHALEDIHLNIEHELIQRIGDPGGKLHTGRSRNDQVATDLHLYVKKQVIEIQALIRSFQESILTLAKSHVETIMPGYTHLQRAQPISFAHHIMTYFWMLERDYTRFADSLKRIDISPLGAAALSGTTHPIDRHETQELLGFEYIYENSLDAVSDRDYIIETLHNISLTMTHLSRFAEEIIFWSTDEAKFITLSDAFSTGSSIMPQKKNPDMAELIRGKVGRTTGHLMSMLVTLKGLPLAYNKDLQEDKEGLFDSVRTIKGSLRIFEGMLNTLTVNTNRLNETVHQDFSNATELADYLVDKNVPFRTAHEIVGKIVFECIQQGIYLLDVPFEHYQELNDKIEEDVYDYLKPENCLNRRKSYGSTGQDAVRHQLNVAENILK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 46012 47388 . - 0 GCA_005502385.1_01803 GCA_005502385.1_01803_gene,GCA_005502385.1_01803_mRNA GCA_005502385.1_01803 Argininosuccinate lyase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSNKAWGGRFQQQPEEWVDAFNASIDFDQTLLDEDIQGSIAHATMLAHQNIISEEEKNAIVKGLKDIQADFHNHNIEFKHALEDIHLNIEHELIQRIGDPGGKLHTGRSRNDQVATDLHLYVKKQVIEIQALIRSFQESILTLAKSHVETIMPGYTHLQRAQPISFAHHIMTYFWMLERDYTRFADSLKRIDISPLGAAALSGTTHPIDRHETQELLGFEYIYENSLDAVSDRDYIIETLHNISLTMTHLSRFAEEIIFWSTDEAKFITLSDAFSTGSSIMPQKKNPDMAELIRGKVGRTTGHLMSMLVTLKGLPLAYNKDLQEDKEGLFDSVRTIKGSLRIFEGMLNTLTVNTNRLNETVHQDFSNATELADYLVDKNVPFRTAHEIVGKIVFECIQQGIYLLDVPFEHYQELNDKIEEDVYDYLKPENCLNRRKSYGSTGQDAVRHQLNVAENILK persistent 458 argH argininosuccinate lyase 4.3.2.1 GO:0004056,GO:0042450 WP_049434475.1 UPI00066D6B4B UniRef100_UPI00066D6B4B,UniRef50_Q5M2K3,UniRef90_A0A3S7GTD2 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 47381 48583 . - . GCA_005502385.1_01804_gene GCA_005502385.1_01804 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKDKIVLAYSGGLDTSVAVKWLIDKGYDVVAVCLDVGEGKDLDVVYSKALDMGAVECHIIDATKEFSEDYVSYAIKGNLMYENSYPLVSALSRPLIAKKLVEIAEQTKSIGIAHGCTGKGNDQVRFEVAIKALNPNLKTFAPVREWGWSREEEIDYAIKHGIPVSINHDSPYSIDQNLWGRANECGILEDPYAAPPKDAYDLTAELEDTPDTPDEIILSFKNGVPVQLNHKDYDLDQLILTLNDLAGKHGIGRIDHVENRLVGIKSREVYETPGAEVILKAHKALETLTLTKDVAHFKPVIEKQFAEQTYNGLWFSPLTDSLKQFIDSTQHYVEGDVRVKLFKGNAIVNGRKSPYTLYDEKLATYTKEDAFDQSAAVGFIDIYGLPTQVNAYLHGGYSNE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 47381 48583 . - . GCA_005502385.1_01804_mRNA GCA_005502385.1_01804 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKDKIVLAYSGGLDTSVAVKWLIDKGYDVVAVCLDVGEGKDLDVVYSKALDMGAVECHIIDATKEFSEDYVSYAIKGNLMYENSYPLVSALSRPLIAKKLVEIAEQTKSIGIAHGCTGKGNDQVRFEVAIKALNPNLKTFAPVREWGWSREEEIDYAIKHGIPVSINHDSPYSIDQNLWGRANECGILEDPYAAPPKDAYDLTAELEDTPDTPDEIILSFKNGVPVQLNHKDYDLDQLILTLNDLAGKHGIGRIDHVENRLVGIKSREVYETPGAEVILKAHKALETLTLTKDVAHFKPVIEKQFAEQTYNGLWFSPLTDSLKQFIDSTQHYVEGDVRVKLFKGNAIVNGRKSPYTLYDEKLATYTKEDAFDQSAAVGFIDIYGLPTQVNAYLHGGYSNE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 47381 48583 . - 0 GCA_005502385.1_01804 GCA_005502385.1_01804_gene,GCA_005502385.1_01804_mRNA GCA_005502385.1_01804 Argininosuccinate synthase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKDKIVLAYSGGLDTSVAVKWLIDKGYDVVAVCLDVGEGKDLDVVYSKALDMGAVECHIIDATKEFSEDYVSYAIKGNLMYENSYPLVSALSRPLIAKKLVEIAEQTKSIGIAHGCTGKGNDQVRFEVAIKALNPNLKTFAPVREWGWSREEEIDYAIKHGIPVSINHDSPYSIDQNLWGRANECGILEDPYAAPPKDAYDLTAELEDTPDTPDEIILSFKNGVPVQLNHKDYDLDQLILTLNDLAGKHGIGRIDHVENRLVGIKSREVYETPGAEVILKAHKALETLTLTKDVAHFKPVIEKQFAEQTYNGLWFSPLTDSLKQFIDSTQHYVEGDVRVKLFKGNAIVNGRKSPYTLYDEKLATYTKEDAFDQSAAVGFIDIYGLPTQVNAYLHGGYSNE persistent 400 argininosuccinate synthase 6.3.4.5 GO:0004055,GO:0005524,GO:0006526 WP_002455539.1 UPI0001EF5296 UniRef100_A0A533ITL3,UniRef50_A0RJM4,UniRef90_A0A380G407 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 48909 50240 . + . GCA_005502385.1_01805_gene GCA_005502385.1_01805 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTHIQLDYGKTLEFFGQHELDQQKDIVKTIHKTIHEGTGAGSDFLGWVNLPEDYDKEEFSRIQKAAKHIQSNSDVLVVIGIGGSYLGARAAIEMLTSSFRNSTEYPEIVFVGNHLSSSYTQELVNYLSDKDFSVNVISKSGTTTEPAVAFRLFKQLVEEKYGKDEAKKRIFATTDKAKGALKQLADNESYETFVVPDDVGGRYSVLTAVGLLPIATAGIDIEAIMNGANKARKELSSENLEENIAYQYATIRNVLYSKGYTTEMLINYEPSMQYFNEWWKQLYGESEGKDFKGIYPSSANYTTDLHSLGQYVQEGRRFLFETVVKVNQPKHDITIEKDDDDLDGLNYLAGKTIDEVNTKAFEGTLLAHTDGGVPNIVVNIPRLDEETFGYVVYFFELACAMSGYQLGVNPFNQPGVEAYKQNMFALLGKPGYEDKKKELEERL . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 48909 50240 . + . GCA_005502385.1_01805_mRNA GCA_005502385.1_01805 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTHIQLDYGKTLEFFGQHELDQQKDIVKTIHKTIHEGTGAGSDFLGWVNLPEDYDKEEFSRIQKAAKHIQSNSDVLVVIGIGGSYLGARAAIEMLTSSFRNSTEYPEIVFVGNHLSSSYTQELVNYLSDKDFSVNVISKSGTTTEPAVAFRLFKQLVEEKYGKDEAKKRIFATTDKAKGALKQLADNESYETFVVPDDVGGRYSVLTAVGLLPIATAGIDIEAIMNGANKARKELSSENLEENIAYQYATIRNVLYSKGYTTEMLINYEPSMQYFNEWWKQLYGESEGKDFKGIYPSSANYTTDLHSLGQYVQEGRRFLFETVVKVNQPKHDITIEKDDDDLDGLNYLAGKTIDEVNTKAFEGTLLAHTDGGVPNIVVNIPRLDEETFGYVVYFFELACAMSGYQLGVNPFNQPGVEAYKQNMFALLGKPGYEDKKKELEERL . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 48909 50240 . + 0 GCA_005502385.1_01805 GCA_005502385.1_01805_gene,GCA_005502385.1_01805_mRNA GCA_005502385.1_01805 Glucose-6-phosphate isomerase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTHIQLDYGKTLEFFGQHELDQQKDIVKTIHKTIHEGTGAGSDFLGWVNLPEDYDKEEFSRIQKAAKHIQSNSDVLVVIGIGGSYLGARAAIEMLTSSFRNSTEYPEIVFVGNHLSSSYTQELVNYLSDKDFSVNVISKSGTTTEPAVAFRLFKQLVEEKYGKDEAKKRIFATTDKAKGALKQLADNESYETFVVPDDVGGRYSVLTAVGLLPIATAGIDIEAIMNGANKARKELSSENLEENIAYQYATIRNVLYSKGYTTEMLINYEPSMQYFNEWWKQLYGESEGKDFKGIYPSSANYTTDLHSLGQYVQEGRRFLFETVVKVNQPKHDITIEKDDDDLDGLNYLAGKTIDEVNTKAFEGTLLAHTDGGVPNIVVNIPRLDEETFGYVVYFFELACAMSGYQLGVNPFNQPGVEAYKQNMFALLGKPGYEDKKKELEERL persistent 443 pgi glucose-6-phosphate isomerase 5.3.1.9 GO:0004347,GO:0005829,GO:0006094,GO:0006096,GO:0048029,GO:0051156,GO:0097367 COG0166,G WP_017175842.1 UPI0002D3EFE1 UniRef100_A0A4Q9WN02,UniRef50_P13376,UniRef90_Q2FZU0 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 50612 51184 . + . GCA_005502385.1_01806_gene GCA_005502385.1_01806 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFHQIEHWFNVLQQLGYFAGFIILYLRAMIPVFPLTLYVILNVHAYGFITGTIISWLGIVAGTFTVFYFFRKFVDASFMQRVKAKKGVKKLTHFIDKQGLVPIFILMCFPFTPNTVVNFVASFSHIKMKNYFIILLFSKFISISFLAVMGREVTTFLTHPIRAIILIIVTIVIWFIGKRVEKHFMGTHEE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 50612 51184 . + . GCA_005502385.1_01806_mRNA GCA_005502385.1_01806 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFHQIEHWFNVLQQLGYFAGFIILYLRAMIPVFPLTLYVILNVHAYGFITGTIISWLGIVAGTFTVFYFFRKFVDASFMQRVKAKKGVKKLTHFIDKQGLVPIFILMCFPFTPNTVVNFVASFSHIKMKNYFIILLFSKFISISFLAVMGREVTTFLTHPIRAIILIIVTIVIWFIGKRVEKHFMGTHEE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 50612 51184 . + 0 GCA_005502385.1_01806 GCA_005502385.1_01806_gene,GCA_005502385.1_01806_mRNA GCA_005502385.1_01806 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFHQIEHWFNVLQQLGYFAGFIILYLRAMIPVFPLTLYVILNVHAYGFITGTIISWLGIVAGTFTVFYFFRKFVDASFMQRVKAKKGVKKLTHFIDKQGLVPIFILMCFPFTPNTVVNFVASFSHIKMKNYFIILLFSKFISISFLAVMGREVTTFLTHPIRAIILIIVTIVIWFIGKRVEKHFMGTHEE persistent 190 TVP38/TMEM64 family membrane protein UniRef50_Q2FZT9,UniRef90_A0A3S7GT57 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 51189 51713 . + . GCA_005502385.1_01807_gene GCA_005502385.1_01807 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MRRIISTSISIILAIIFVIFIQNFLLRSAIVHTNEMAPTLNKNDYIMINKLKVTFNLLNEGDIIMYRHHDQIHFSRIIGKAGESVEIRHGKLYKDDRQVNKYYAKNRDINDFALRDLENTDGDIIPPDSFLVLNDNSNTLTDSRKYGLIKKSDVIGKVCLRYYPFRSFNYEFNK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 51189 51713 . + . GCA_005502385.1_01807_mRNA GCA_005502385.1_01807 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MRRIISTSISIILAIIFVIFIQNFLLRSAIVHTNEMAPTLNKNDYIMINKLKVTFNLLNEGDIIMYRHHDQIHFSRIIGKAGESVEIRHGKLYKDDRQVNKYYAKNRDINDFALRDLENTDGDIIPPDSFLVLNDNSNTLTDSRKYGLIKKSDVIGKVCLRYYPFRSFNYEFNK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 51189 51713 . + 0 GCA_005502385.1_01807 GCA_005502385.1_01807_gene,GCA_005502385.1_01807_mRNA GCA_005502385.1_01807 Signal peptidase IB GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MRRIISTSISIILAIIFVIFIQNFLLRSAIVHTNEMAPTLNKNDYIMINKLKVTFNLLNEGDIIMYRHHDQIHFSRIIGKAGESVEIRHGKLYKDDRQVNKYYAKNRDINDFALRDLENTDGDIIPPDSFLVLNDNSNTLTDSRKYGLIKKSDVIGKVCLRYYPFRSFNYEFNK persistent 174 lepB signal peptidase I 3.4.21.89 GO:0004252,GO:0006465,GO:0009306,GO:0016020 WP_049434473.1 UPI00066DA69F UniRef100_UPI00066DA69F,UniRef50_P0A063,UniRef90_A0A4Q9WQ52 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 51728 52294 . + . GCA_005502385.1_01808_gene GCA_005502385.1_01808 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKKEITEWIVAIAVGLLLVWLVVTFVAKSYTIKGDSMDPTLKDGQHVMVNILGYKVGNIKKGNVIVFHANKSDNYVKRVIGVPGDSVTYKKDQLYVNGKKVNEPYLDYNEKHKQGEYITGSFETKDLLNAHPKSNVIPKNKYLVLGDNREVSKDSRAFGLIDKQQIVGKVSFRFWPLNDFKFNFNPDK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 51728 52294 . + . GCA_005502385.1_01808_mRNA GCA_005502385.1_01808 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKKEITEWIVAIAVGLLLVWLVVTFVAKSYTIKGDSMDPTLKDGQHVMVNILGYKVGNIKKGNVIVFHANKSDNYVKRVIGVPGDSVTYKKDQLYVNGKKVNEPYLDYNEKHKQGEYITGSFETKDLLNAHPKSNVIPKNKYLVLGDNREVSKDSRAFGLIDKQQIVGKVSFRFWPLNDFKFNFNPDK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 51728 52294 . + 0 GCA_005502385.1_01808 GCA_005502385.1_01808_gene,GCA_005502385.1_01808_mRNA GCA_005502385.1_01808 Signal peptidase IB GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKKEITEWIVAIAVGLLLVWLVVTFVAKSYTIKGDSMDPTLKDGQHVMVNILGYKVGNIKKGNVIVFHANKSDNYVKRVIGVPGDSVTYKKDQLYVNGKKVNEPYLDYNEKHKQGEYITGSFETKDLLNAHPKSNVIPKNKYLVLGDNREVSKDSRAFGLIDKQQIVGKVSFRFWPLNDFKFNFNPDK persistent 188 lepB signal peptidase I 3.4.21.89 GO:0004252,GO:0006465,GO:0009306,GO:0016020 WP_049434471.1 UPI00066B1FE9 UniRef100_UPI00066B1FE9,UniRef50_Q5HHB9,UniRef90_A0A657M1A4 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 52423 55911 . + . GCA_005502385.1_01809_gene GCA_005502385.1_01809 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MELNTYLGRAGTGKSYHMIKNIKQQMKENPLGDPIILIAPTQSTFQLEQSFVNDRELNGSLRTEVLHFERLSYRIFQELGGLTETRLTKAAIEMMIFNIVQQHKSEMKLYQSQADYYGFSEKLSEQIQDFKKYSVTPHQLDSFLEDNELQTRTRHKLEDISLIYHYFEERLNGEFITAEDSLNYFIEIMHKSEWIKHADIYIDGFYNFSTLEYQIIKALVQNAKQVTILLTTDGNEDHFSMFRKPSDVLIHLKEIANELHIPLNEHYFTTPYRFKNKDLLQLEQQFDALQVNPTQSHGYIDLLESSNMREEVNEIARRIIKDTRDKHFRYQDIAILYRDETYAYLFESILPQYDIPYNIDTKKSMTHHPIMEMIRSLLEVIQSNMGLSPMMRLFKTNILSHQFKNSSYLIDLLENFVIERGIYGKKWLDDKLFNIDNFTKMGRKEHQLTEEEKEAFEDVVRLKDDVVNKILRFEQAMLHSKNVRDYATAFYETMEAFDLPKYLMAHRDELDLKGDHEKAEEIDQLWNGLIQILDDLVTVFEEEEMSLNRFLEVFDIGLEQLEFVMIPQTLDQVSIGTMDLAKVDNKKHVYMVGMNDGVMPQPMSSSSLITDEEKRLLEEQGSVELSPTSDILQMDEAFVCYIAMTRACEQMTFSYSLMGIQGDEKEKSPFLNQIQALFSNLDIQNIHYLHHAYPLTLMEHPHQTKIHLFEALKSWLEEEAVADTWLDAYKVISENEELNDSINYLSTSLTYDNETIQLTPQLSEALYGTSINASVSRFEGYNDCPFQHYATYGLRLNERTKYQLESFDLGNIFHNALKYISDKVNGEFSQLDNQKIHALTEEALQHVLPQVQFNLMDSNAYYRYVSKRIGVIVESTLKALRYQNENTKFRPKRFETAFRKKPRTEEELIAHPLMTTQGIPIHIRGQIDRIDTYTKNNTSFVNIIDYKSSNHSANLNLKKVYYGKQMQMMTYMDIVLQNSERLGLSSEVKPGGLLYFHIHDERLKFEKWGDLTEEALNKKNINQAILKEYKLKGLINSDAEVIDAMDIRLNEISKSDIVPVTLKKDGSISARGSQAADETTIHKFIQHNKNNFIETASNIMDGHTEVAPLKFEDKLPCEFCSFQSVCHVDSLIDSKHYRHVDESINPIQAIQEVELESGEDNE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 52423 55911 . + . GCA_005502385.1_01809_mRNA GCA_005502385.1_01809 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MELNTYLGRAGTGKSYHMIKNIKQQMKENPLGDPIILIAPTQSTFQLEQSFVNDRELNGSLRTEVLHFERLSYRIFQELGGLTETRLTKAAIEMMIFNIVQQHKSEMKLYQSQADYYGFSEKLSEQIQDFKKYSVTPHQLDSFLEDNELQTRTRHKLEDISLIYHYFEERLNGEFITAEDSLNYFIEIMHKSEWIKHADIYIDGFYNFSTLEYQIIKALVQNAKQVTILLTTDGNEDHFSMFRKPSDVLIHLKEIANELHIPLNEHYFTTPYRFKNKDLLQLEQQFDALQVNPTQSHGYIDLLESSNMREEVNEIARRIIKDTRDKHFRYQDIAILYRDETYAYLFESILPQYDIPYNIDTKKSMTHHPIMEMIRSLLEVIQSNMGLSPMMRLFKTNILSHQFKNSSYLIDLLENFVIERGIYGKKWLDDKLFNIDNFTKMGRKEHQLTEEEKEAFEDVVRLKDDVVNKILRFEQAMLHSKNVRDYATAFYETMEAFDLPKYLMAHRDELDLKGDHEKAEEIDQLWNGLIQILDDLVTVFEEEEMSLNRFLEVFDIGLEQLEFVMIPQTLDQVSIGTMDLAKVDNKKHVYMVGMNDGVMPQPMSSSSLITDEEKRLLEEQGSVELSPTSDILQMDEAFVCYIAMTRACEQMTFSYSLMGIQGDEKEKSPFLNQIQALFSNLDIQNIHYLHHAYPLTLMEHPHQTKIHLFEALKSWLEEEAVADTWLDAYKVISENEELNDSINYLSTSLTYDNETIQLTPQLSEALYGTSINASVSRFEGYNDCPFQHYATYGLRLNERTKYQLESFDLGNIFHNALKYISDKVNGEFSQLDNQKIHALTEEALQHVLPQVQFNLMDSNAYYRYVSKRIGVIVESTLKALRYQNENTKFRPKRFETAFRKKPRTEEELIAHPLMTTQGIPIHIRGQIDRIDTYTKNNTSFVNIIDYKSSNHSANLNLKKVYYGKQMQMMTYMDIVLQNSERLGLSSEVKPGGLLYFHIHDERLKFEKWGDLTEEALNKKNINQAILKEYKLKGLINSDAEVIDAMDIRLNEISKSDIVPVTLKKDGSISARGSQAADETTIHKFIQHNKNNFIETASNIMDGHTEVAPLKFEDKLPCEFCSFQSVCHVDSLIDSKHYRHVDESINPIQAIQEVELESGEDNE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 52423 55911 . + 0 GCA_005502385.1_01809 GCA_005502385.1_01809_gene,GCA_005502385.1_01809_mRNA GCA_005502385.1_01809 ATP-dependent helicase/deoxyribonuclease subunit B GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MELNTYLGRAGTGKSYHMIKNIKQQMKENPLGDPIILIAPTQSTFQLEQSFVNDRELNGSLRTEVLHFERLSYRIFQELGGLTETRLTKAAIEMMIFNIVQQHKSEMKLYQSQADYYGFSEKLSEQIQDFKKYSVTPHQLDSFLEDNELQTRTRHKLEDISLIYHYFEERLNGEFITAEDSLNYFIEIMHKSEWIKHADIYIDGFYNFSTLEYQIIKALVQNAKQVTILLTTDGNEDHFSMFRKPSDVLIHLKEIANELHIPLNEHYFTTPYRFKNKDLLQLEQQFDALQVNPTQSHGYIDLLESSNMREEVNEIARRIIKDTRDKHFRYQDIAILYRDETYAYLFESILPQYDIPYNIDTKKSMTHHPIMEMIRSLLEVIQSNMGLSPMMRLFKTNILSHQFKNSSYLIDLLENFVIERGIYGKKWLDDKLFNIDNFTKMGRKEHQLTEEEKEAFEDVVRLKDDVVNKILRFEQAMLHSKNVRDYATAFYETMEAFDLPKYLMAHRDELDLKGDHEKAEEIDQLWNGLIQILDDLVTVFEEEEMSLNRFLEVFDIGLEQLEFVMIPQTLDQVSIGTMDLAKVDNKKHVYMVGMNDGVMPQPMSSSSLITDEEKRLLEEQGSVELSPTSDILQMDEAFVCYIAMTRACEQMTFSYSLMGIQGDEKEKSPFLNQIQALFSNLDIQNIHYLHHAYPLTLMEHPHQTKIHLFEALKSWLEEEAVADTWLDAYKVISENEELNDSINYLSTSLTYDNETIQLTPQLSEALYGTSINASVSRFEGYNDCPFQHYATYGLRLNERTKYQLESFDLGNIFHNALKYISDKVNGEFSQLDNQKIHALTEEALQHVLPQVQFNLMDSNAYYRYVSKRIGVIVESTLKALRYQNENTKFRPKRFETAFRKKPRTEEELIAHPLMTTQGIPIHIRGQIDRIDTYTKNNTSFVNIIDYKSSNHSANLNLKKVYYGKQMQMMTYMDIVLQNSERLGLSSEVKPGGLLYFHIHDERLKFEKWGDLTEEALNKKNINQAILKEYKLKGLINSDAEVIDAMDIRLNEISKSDIVPVTLKKDGSISARGSQAADETTIHKFIQHNKNNFIETASNIMDGHTEVAPLKFEDKLPCEFCSFQSVCHVDSLIDSKHYRHVDESINPIQAIQEVELESGEDNE persistent 1162 addB helicase-exonuclease AddAB subunit AddB 3.1.-.-,3.6.4.12 GO:0000724,GO:0004527 UniRef50_Q2FZT6,UniRef90_A0A3S7GTP5 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 55904 59569 . + . GCA_005502385.1_01810_gene GCA_005502385.1_01810 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNNIPIKPKDAQWTDAQWNSIYAKGQDILVAAAAGSGKTAVLVERIIQKILRDEVDVDKLLVVTFTNLSAREMKHRVEQRIQQASLEDPKNEHLKSQRIKIHQAQISTLHSFCLKVIQQHYDVIQLDPNFRTISEVENVLLLEQSIDEVLEHHYENPDIEFLTLVEQLSNDRNDDGFREMLKRFYYFSIANPSPFKWLDSLVDPYENDEKQQDYLKELKILAEIYMKAAFDSLLEAENLLSYCNAVEKHLEVVQREKMICQSILEDGVLNRDALLNHTPEKFPQMSSKIKKENEDLETLEDIKSFYKEYNETIQDVKNKYLMRSVDELKDDMKQLAPRIKYLVQIIKDIINDFAKKKRSRNVLDFADYEHFALQILTDENGMPSTIAKDYRHQFEEILIDEYQDTNQVQEAIISTIKRGDELDGNLFMVGDVKQSIYKFRQADPTLFMSKYHRFTKEGQQTGLRIDLSNNFRSRKEVLSTTNYLFDHMMDEAVGEINYDADARLYFGAHYYPEKPMPLELHALIKSENEDTDLDRQEQEAYYVVEQVKHILDNKLVYDAKNNAYRKATYKDIVILERGMSNARRLQKVFKDNNIPFHVNSKEGYFEQTEVRLVLSFLRTIDNPLQDIYLVGLMRSVIYQFTEDELAEIRVVSSNDDYFYQSILHYIKYDQANTQLVDKLRRFIEDIHLYQDYGQTHPVYQLIDKFYNDHYVIQYFSGLIGGKGRRANLFGLFNKAIEFENSTFRGLYQFIRFIDELIERKKDFGEENVIGPNDNVVRMMTIHSSKGLEFPYVIYSGLSKNFNKEDIRKPLVLNQKYGLGMEYYDLTDNISYPSLSSVVVKSLTEKELISEEMRLMYVALTRAKEQLILIGTVDKEEKLRKYERLPISNQLIALHKRLSVERPFNLVYSILAKHLSQSITSDYQFETSINQLDDSLKPYVDLKIIHFDELSLISDSNETLHRTINDIEEEAPNNKENEQQMIHQLTFKYPFIKNTQKPSKQSVSELKRQLETKEDGTSYDRVRQYRIGAYTYERPKFLRQERKRKANEIGTLMHTVMQHLPFREQRLTEIELDDYIHMLIDQHIIEEDAKKDIQFERIMEFIRSDLYMKIAQADEVYRELPFVVNQARVDEIPDLDEDVSIIQGMIDLIFIKDNQYYFVDYKTDAFNRRRGLTDQEIGIQLRDKYKIQMKYYKNTLETILNKRVNGYLYFFQFGEMSIEDAL . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 55904 59569 . + . GCA_005502385.1_01810_mRNA GCA_005502385.1_01810 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNNIPIKPKDAQWTDAQWNSIYAKGQDILVAAAAGSGKTAVLVERIIQKILRDEVDVDKLLVVTFTNLSAREMKHRVEQRIQQASLEDPKNEHLKSQRIKIHQAQISTLHSFCLKVIQQHYDVIQLDPNFRTISEVENVLLLEQSIDEVLEHHYENPDIEFLTLVEQLSNDRNDDGFREMLKRFYYFSIANPSPFKWLDSLVDPYENDEKQQDYLKELKILAEIYMKAAFDSLLEAENLLSYCNAVEKHLEVVQREKMICQSILEDGVLNRDALLNHTPEKFPQMSSKIKKENEDLETLEDIKSFYKEYNETIQDVKNKYLMRSVDELKDDMKQLAPRIKYLVQIIKDIINDFAKKKRSRNVLDFADYEHFALQILTDENGMPSTIAKDYRHQFEEILIDEYQDTNQVQEAIISTIKRGDELDGNLFMVGDVKQSIYKFRQADPTLFMSKYHRFTKEGQQTGLRIDLSNNFRSRKEVLSTTNYLFDHMMDEAVGEINYDADARLYFGAHYYPEKPMPLELHALIKSENEDTDLDRQEQEAYYVVEQVKHILDNKLVYDAKNNAYRKATYKDIVILERGMSNARRLQKVFKDNNIPFHVNSKEGYFEQTEVRLVLSFLRTIDNPLQDIYLVGLMRSVIYQFTEDELAEIRVVSSNDDYFYQSILHYIKYDQANTQLVDKLRRFIEDIHLYQDYGQTHPVYQLIDKFYNDHYVIQYFSGLIGGKGRRANLFGLFNKAIEFENSTFRGLYQFIRFIDELIERKKDFGEENVIGPNDNVVRMMTIHSSKGLEFPYVIYSGLSKNFNKEDIRKPLVLNQKYGLGMEYYDLTDNISYPSLSSVVVKSLTEKELISEEMRLMYVALTRAKEQLILIGTVDKEEKLRKYERLPISNQLIALHKRLSVERPFNLVYSILAKHLSQSITSDYQFETSINQLDDSLKPYVDLKIIHFDELSLISDSNETLHRTINDIEEEAPNNKENEQQMIHQLTFKYPFIKNTQKPSKQSVSELKRQLETKEDGTSYDRVRQYRIGAYTYERPKFLRQERKRKANEIGTLMHTVMQHLPFREQRLTEIELDDYIHMLIDQHIIEEDAKKDIQFERIMEFIRSDLYMKIAQADEVYRELPFVVNQARVDEIPDLDEDVSIIQGMIDLIFIKDNQYYFVDYKTDAFNRRRGLTDQEIGIQLRDKYKIQMKYYKNTLETILNKRVNGYLYFFQFGEMSIEDAL . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 55904 59569 . + 0 GCA_005502385.1_01810 GCA_005502385.1_01810_gene,GCA_005502385.1_01810_mRNA GCA_005502385.1_01810 ATP-dependent helicase/nuclease subunit A GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNNIPIKPKDAQWTDAQWNSIYAKGQDILVAAAAGSGKTAVLVERIIQKILRDEVDVDKLLVVTFTNLSAREMKHRVEQRIQQASLEDPKNEHLKSQRIKIHQAQISTLHSFCLKVIQQHYDVIQLDPNFRTISEVENVLLLEQSIDEVLEHHYENPDIEFLTLVEQLSNDRNDDGFREMLKRFYYFSIANPSPFKWLDSLVDPYENDEKQQDYLKELKILAEIYMKAAFDSLLEAENLLSYCNAVEKHLEVVQREKMICQSILEDGVLNRDALLNHTPEKFPQMSSKIKKENEDLETLEDIKSFYKEYNETIQDVKNKYLMRSVDELKDDMKQLAPRIKYLVQIIKDIINDFAKKKRSRNVLDFADYEHFALQILTDENGMPSTIAKDYRHQFEEILIDEYQDTNQVQEAIISTIKRGDELDGNLFMVGDVKQSIYKFRQADPTLFMSKYHRFTKEGQQTGLRIDLSNNFRSRKEVLSTTNYLFDHMMDEAVGEINYDADARLYFGAHYYPEKPMPLELHALIKSENEDTDLDRQEQEAYYVVEQVKHILDNKLVYDAKNNAYRKATYKDIVILERGMSNARRLQKVFKDNNIPFHVNSKEGYFEQTEVRLVLSFLRTIDNPLQDIYLVGLMRSVIYQFTEDELAEIRVVSSNDDYFYQSILHYIKYDQANTQLVDKLRRFIEDIHLYQDYGQTHPVYQLIDKFYNDHYVIQYFSGLIGGKGRRANLFGLFNKAIEFENSTFRGLYQFIRFIDELIERKKDFGEENVIGPNDNVVRMMTIHSSKGLEFPYVIYSGLSKNFNKEDIRKPLVLNQKYGLGMEYYDLTDNISYPSLSSVVVKSLTEKELISEEMRLMYVALTRAKEQLILIGTVDKEEKLRKYERLPISNQLIALHKRLSVERPFNLVYSILAKHLSQSITSDYQFETSINQLDDSLKPYVDLKIIHFDELSLISDSNETLHRTINDIEEEAPNNKENEQQMIHQLTFKYPFIKNTQKPSKQSVSELKRQLETKEDGTSYDRVRQYRIGAYTYERPKFLRQERKRKANEIGTLMHTVMQHLPFREQRLTEIELDDYIHMLIDQHIIEEDAKKDIQFERIMEFIRSDLYMKIAQADEVYRELPFVVNQARVDEIPDLDEDVSIIQGMIDLIFIKDNQYYFVDYKTDAFNRRRGLTDQEIGIQLRDKYKIQMKYYKNTLETILNKRVNGYLYFFQFGEMSIEDAL persistent 1221 addA helicase-exonuclease AddAB subunit AddA 3.1.-.-,3.6.4.12,5.6.2.4 GO:0000724,GO:0003678,GO:0006302,GO:0016818 WP_054105353.1 UPI0006B97FB3 UniRef100_UPI0020950C07,UniRef50_Q4L4Y3,UniRef90_A0A3S7GTP7 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 59696 60598 . + . GCA_005502385.1_01811_gene GCA_005502385.1_01811 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKFLSFKYNNAESYGVKVKREDAVWDLKQIFAEFGEGDFHPQTLLEGLQQNQTLDFQEQVRKAIVAVENSGKADQYKFSFNDIEFLPPVTPPNNVIAFGRNYKDHASELNHEVQRLYVFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKYGEKIPKGLALDYVYGYTIINDITDRTAQNAQDQAFLSKSLTGGCPMGPYIVTKDELPTPENVNIVTKVNNEIRQDGNTSQMINKIDDLIQEISKYVALHPGDIIATGTPAGVGAGLQPPKFLQPGDEVKVTIDNIGTLTTYIAK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 59696 60598 . + . GCA_005502385.1_01811_mRNA GCA_005502385.1_01811 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKFLSFKYNNAESYGVKVKREDAVWDLKQIFAEFGEGDFHPQTLLEGLQQNQTLDFQEQVRKAIVAVENSGKADQYKFSFNDIEFLPPVTPPNNVIAFGRNYKDHASELNHEVQRLYVFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKYGEKIPKGLALDYVYGYTIINDITDRTAQNAQDQAFLSKSLTGGCPMGPYIVTKDELPTPENVNIVTKVNNEIRQDGNTSQMINKIDDLIQEISKYVALHPGDIIATGTPAGVGAGLQPPKFLQPGDEVKVTIDNIGTLTTYIAK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 59696 60598 . + 0 GCA_005502385.1_01811 GCA_005502385.1_01811_gene,GCA_005502385.1_01811_mRNA GCA_005502385.1_01811 putative protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKFLSFKYNNAESYGVKVKREDAVWDLKQIFAEFGEGDFHPQTLLEGLQQNQTLDFQEQVRKAIVAVENSGKADQYKFSFNDIEFLPPVTPPNNVIAFGRNYKDHASELNHEVQRLYVFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKYGEKIPKGLALDYVYGYTIINDITDRTAQNAQDQAFLSKSLTGGCPMGPYIVTKDELPTPENVNIVTKVNNEIRQDGNTSQMINKIDDLIQEISKYVALHPGDIIATGTPAGVGAGLQPPKFLQPGDEVKVTIDNIGTLTTYIAK persistent 300 ycgM Uncharacterized protein SH1982 GO:0018773,GO:0046872 COG0179,Q WP_017175836.1 UPI00031A3CD9 UniRef100_A0A3S7GTL7,UniRef50_Q2FZT4,UniRef90_Q4L4Y4 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 60728 61129 . + . GCA_005502385.1_01812_gene GCA_005502385.1_01812 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLHMHIVSWVLTIVLYIIAFLHISKSQGPTPTFKSLHMGLRVFMLLTIFSGFWELIEEFMAASHGEGGNHMLLTLKMLCGLGVVALMEVSLAKRKKHAPSHGLFWATIILIIITMALGIILPWGPLSKMFGLS . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 60728 61129 . + . GCA_005502385.1_01812_mRNA GCA_005502385.1_01812 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLHMHIVSWVLTIVLYIIAFLHISKSQGPTPTFKSLHMGLRVFMLLTIFSGFWELIEEFMAASHGEGGNHMLLTLKMLCGLGVVALMEVSLAKRKKHAPSHGLFWATIILIIITMALGIILPWGPLSKMFGLS . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 60728 61129 . + 0 GCA_005502385.1_01812 GCA_005502385.1_01812_gene,GCA_005502385.1_01812_mRNA GCA_005502385.1_01812 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLHMHIVSWVLTIVLYIIAFLHISKSQGPTPTFKSLHMGLRVFMLLTIFSGFWELIEEFMAASHGEGGNHMLLTLKMLCGLGVVALMEVSLAKRKKHAPSHGLFWATIILIIITMALGIILPWGPLSKMFGLS persistent 133 UPF0344 protein BUZ51_00505 WP_017175835.1 UPI0002FBB965 UniRef100_A0A4Q9WRI8,UniRef50_Q2FZT3,UniRef90_A0A974QPK6 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 61170 62492 . - . GCA_005502385.1_01813_gene GCA_005502385.1_01813 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAKIIIVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCGLPYYIGHLVSDRHQILPITPDIFKEKKNIVVKTHHEVIEVNDQQHVVRVLNHQTGETFDETYDKLILSPGASANTLGFTNNFTFTLRNAEDMDQIDQYISRHKAKRALVVGAGYISLEVLENLYQRGLDVTWIHRSDKVNKLMDQDMNAAIFSEIDQRNISYRLNEEIESIQAHTVYFKSGIHEDFDIIIEGIGTHPNSSFLRSSNIHIDKQGFIPVDDCFKTNIPDIYALGDVITSHYRHVNMNAQVPLAWGAHRAASIIAEQLSGNKHITFKGFLGSNIVKFFDYTFASVGIKPEELSLFNYEMVEIKSGAHAGYYPGNTPLHLRVYFNKDNRQLIRAAAVGKQGPDKRIDILSMAMMNQLTVDELAEFEVAYAPPYSHPKDLINMIGYKARNI . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 61170 62492 . - . GCA_005502385.1_01813_mRNA GCA_005502385.1_01813 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAKIIIVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCGLPYYIGHLVSDRHQILPITPDIFKEKKNIVVKTHHEVIEVNDQQHVVRVLNHQTGETFDETYDKLILSPGASANTLGFTNNFTFTLRNAEDMDQIDQYISRHKAKRALVVGAGYISLEVLENLYQRGLDVTWIHRSDKVNKLMDQDMNAAIFSEIDQRNISYRLNEEIESIQAHTVYFKSGIHEDFDIIIEGIGTHPNSSFLRSSNIHIDKQGFIPVDDCFKTNIPDIYALGDVITSHYRHVNMNAQVPLAWGAHRAASIIAEQLSGNKHITFKGFLGSNIVKFFDYTFASVGIKPEELSLFNYEMVEIKSGAHAGYYPGNTPLHLRVYFNKDNRQLIRAAAVGKQGPDKRIDILSMAMMNQLTVDELAEFEVAYAPPYSHPKDLINMIGYKARNI . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 61170 62492 . - 0 GCA_005502385.1_01813 GCA_005502385.1_01813_gene,GCA_005502385.1_01813_mRNA GCA_005502385.1_01813 Coenzyme A disulfide reductase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAKIIIVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCGLPYYIGHLVSDRHQILPITPDIFKEKKNIVVKTHHEVIEVNDQQHVVRVLNHQTGETFDETYDKLILSPGASANTLGFTNNFTFTLRNAEDMDQIDQYISRHKAKRALVVGAGYISLEVLENLYQRGLDVTWIHRSDKVNKLMDQDMNAAIFSEIDQRNISYRLNEEIESIQAHTVYFKSGIHEDFDIIIEGIGTHPNSSFLRSSNIHIDKQGFIPVDDCFKTNIPDIYALGDVITSHYRHVNMNAQVPLAWGAHRAASIIAEQLSGNKHITFKGFLGSNIVKFFDYTFASVGIKPEELSLFNYEMVEIKSGAHAGYYPGNTPLHLRVYFNKDNRQLIRAAAVGKQGPDKRIDILSMAMMNQLTVDELAEFEVAYAPPYSHPKDLINMIGYKARNI persistent 440 CoA-disulfide reductase 1.8.1.14 GO:0016491,GO:0045454 WP_049434464.1 UPI00066AA736 UniRef100_UPI00066AA736,UniRef50_O52582,UniRef90_A0A4Q9WNU4 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 62575 63396 . - . GCA_005502385.1_01814_gene GCA_005502385.1_01814 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKPYLICLDLDGTLLNDNKEISDYTKKVLTSLQKQGHYLMIATGRPYRASQIYYHELNMNTPIVNFNGAYVHHPKADDFETKHEVLDVDIARSMIEALQKANVTNIIAEVRDSVFINDHDPRLFEGFSMGNPKIQTGNLLEKLDESPTSILVEAEEVNITRIKQMLTRFYAENIEHRRWGAPFPVIEIVKRGISKARGIDYVKSYLNIDSSNIIAFGDEDNDLEMIKYAQYGIAMDNGLDDLKHIANHITYSNNEDGIGRYLNEFFKLEIPYQ . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 62575 63396 . - . GCA_005502385.1_01814_mRNA GCA_005502385.1_01814 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKPYLICLDLDGTLLNDNKEISDYTKKVLTSLQKQGHYLMIATGRPYRASQIYYHELNMNTPIVNFNGAYVHHPKADDFETKHEVLDVDIARSMIEALQKANVTNIIAEVRDSVFINDHDPRLFEGFSMGNPKIQTGNLLEKLDESPTSILVEAEEVNITRIKQMLTRFYAENIEHRRWGAPFPVIEIVKRGISKARGIDYVKSYLNIDSSNIIAFGDEDNDLEMIKYAQYGIAMDNGLDDLKHIANHITYSNNEDGIGRYLNEFFKLEIPYQ . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 62575 63396 . - 0 GCA_005502385.1_01814 GCA_005502385.1_01814_gene,GCA_005502385.1_01814_mRNA GCA_005502385.1_01814 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YitU GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKPYLICLDLDGTLLNDNKEISDYTKKVLTSLQKQGHYLMIATGRPYRASQIYYHELNMNTPIVNFNGAYVHHPKADDFETKHEVLDVDIARSMIEALQKANVTNIIAEVRDSVFINDHDPRLFEGFSMGNPKIQTGNLLEKLDESPTSILVEAEEVNITRIKQMLTRFYAENIEHRRWGAPFPVIEIVKRGISKARGIDYVKSYLNIDSSNIIAFGDEDNDLEMIKYAQYGIAMDNGLDDLKHIANHITYSNNEDGIGRYLNEFFKLEIPYQ persistent 273 Cof-type HAD-IIB family hydrolase 3.1.3.104 WP_017175833.1 UPI0002E0E596 UniRef100_A0A4V2KWY4,UniRef50_B9EAP4,UniRef90_A0A657ZUG5 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 63516 63824 . + . GCA_005502385.1_01815_gene GCA_005502385.1_01815 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MEEALKDSILGALEMVIDPELGIDIVNLGLVYKVNVDDEGLCTVEMTLTSMGCPLGPQIIDQIKTVLAEIPEIQDTEVNIVWNPPWNKDMMSRYAKIALGVG . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 63516 63824 . + . GCA_005502385.1_01815_mRNA GCA_005502385.1_01815 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MEEALKDSILGALEMVIDPELGIDIVNLGLVYKVNVDDEGLCTVEMTLTSMGCPLGPQIIDQIKTVLAEIPEIQDTEVNIVWNPPWNKDMMSRYAKIALGVG . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 63516 63824 . + 0 GCA_005502385.1_01815 GCA_005502385.1_01815_gene,GCA_005502385.1_01815_mRNA GCA_005502385.1_01815 Fe-S protein maturation auxiliary factor SufT GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MEEALKDSILGALEMVIDPELGIDIVNLGLVYKVNVDDEGLCTVEMTLTSMGCPLGPQIIDQIKTVLAEIPEIQDTEVNIVWNPPWNKDMMSRYAKIALGVG persistent 102 sufT Fe-S protein maturation auxiliary factor SufT COG2151,O WP_002448080.1 UPI00019FC6D8 UniRef100_A0A1L8Y3S1,UniRef50_A0A0H2XI17,UniRef90_A0A0H2XI17 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 64310 66124 . + . GCA_005502385.1_01816_gene GCA_005502385.1_01816 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKQNLEKGVHDKIKMRYMPGLDGLRAIAVLGIIIYHLNRKWLTGGFIGVDTFFVISGYLITSLLLREYEEKGIINLKQFWIRRIKRLLPAVIALLITVGIATLLFEPQQIIRVKHDIIAALFYVSNWWYIAKDVNYFEQFSFMPLKHLWSLAIEEQFYLFFPFVLVILLLTIKKYRNVTLIFWIVSLASLLEMVIISQPNVGYSRVYFGTDTRLQTLLLGVILAFVWPPFKLKANPPQRLRRAIDGIGIGSLLILIILFFTVNDDSDWIYNGGFYLISLVTLFVIASVVHPSTMIAKFLGHPLLVYIGKRSYSLYLWHFAVISFLHIHFVDGQLPIYVYILDILLTVVFAELSYRYIETPFRREGLSAFSFDRLRKPKFIRTIVTIIAVIPLLLIFMGAFDRFGKDEIANKANSFNTSTADKYLVKMMPGENIKLNGQTSKSENKDKVYTNISPLLIGDSVMVDIGEEFKSQVPKATIDGKVGRHLQEALIVANNYTNYNKPSNQVVLELGTNGDFTQDELDQLISKFGKAKIYLVNTRVPRSWQDNVNKQLSDAAKRHKNVVLVDWYKRSAGHTEYFASDGVHLEHSGVQALSDEILKNMTKK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 64310 66124 . + . GCA_005502385.1_01816_mRNA GCA_005502385.1_01816 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKQNLEKGVHDKIKMRYMPGLDGLRAIAVLGIIIYHLNRKWLTGGFIGVDTFFVISGYLITSLLLREYEEKGIINLKQFWIRRIKRLLPAVIALLITVGIATLLFEPQQIIRVKHDIIAALFYVSNWWYIAKDVNYFEQFSFMPLKHLWSLAIEEQFYLFFPFVLVILLLTIKKYRNVTLIFWIVSLASLLEMVIISQPNVGYSRVYFGTDTRLQTLLLGVILAFVWPPFKLKANPPQRLRRAIDGIGIGSLLILIILFFTVNDDSDWIYNGGFYLISLVTLFVIASVVHPSTMIAKFLGHPLLVYIGKRSYSLYLWHFAVISFLHIHFVDGQLPIYVYILDILLTVVFAELSYRYIETPFRREGLSAFSFDRLRKPKFIRTIVTIIAVIPLLLIFMGAFDRFGKDEIANKANSFNTSTADKYLVKMMPGENIKLNGQTSKSENKDKVYTNISPLLIGDSVMVDIGEEFKSQVPKATIDGKVGRHLQEALIVANNYTNYNKPSNQVVLELGTNGDFTQDELDQLISKFGKAKIYLVNTRVPRSWQDNVNKQLSDAAKRHKNVVLVDWYKRSAGHTEYFASDGVHLEHSGVQALSDEILKNMTKK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 64310 66124 . + 0 GCA_005502385.1_01816 GCA_005502385.1_01816_gene,GCA_005502385.1_01816_mRNA GCA_005502385.1_01816 O-acetyltransferase OatA GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKQNLEKGVHDKIKMRYMPGLDGLRAIAVLGIIIYHLNRKWLTGGFIGVDTFFVISGYLITSLLLREYEEKGIINLKQFWIRRIKRLLPAVIALLITVGIATLLFEPQQIIRVKHDIIAALFYVSNWWYIAKDVNYFEQFSFMPLKHLWSLAIEEQFYLFFPFVLVILLLTIKKYRNVTLIFWIVSLASLLEMVIISQPNVGYSRVYFGTDTRLQTLLLGVILAFVWPPFKLKANPPQRLRRAIDGIGIGSLLILIILFFTVNDDSDWIYNGGFYLISLVTLFVIASVVHPSTMIAKFLGHPLLVYIGKRSYSLYLWHFAVISFLHIHFVDGQLPIYVYILDILLTVVFAELSYRYIETPFRREGLSAFSFDRLRKPKFIRTIVTIIAVIPLLLIFMGAFDRFGKDEIANKANSFNTSTADKYLVKMMPGENIKLNGQTSKSENKDKVYTNISPLLIGDSVMVDIGEEFKSQVPKATIDGKVGRHLQEALIVANNYTNYNKPSNQVVLELGTNGDFTQDELDQLISKFGKAKIYLVNTRVPRSWQDNVNKQLSDAAKRHKNVVLVDWYKRSAGHTEYFASDGVHLEHSGVQALSDEILKNMTKK persistent 604 Acetyltransferase WP_017175832.1 UPI00031A6152 UniRef100_A0A3S7GT48,UniRef50_Q2FV54,UniRef90_A0A3S7GT48 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 66416 69025 . + . GCA_005502385.1_01817_gene GCA_005502385.1_01817 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDINQMTYKVQEALQKAIELSKENELQNIEIEAILKGTLEEDESLFKSILERANIDTDQLNQAYSEKLKHYPSVQGDNVQYGQYIGSKANELLNKAESYMKEYEDEYISMEHILRAAMDIDETTQQFVGNKEEVVKEIITKVRGGNHVTSQNPEVNYEALEKYGRDLVEEVRQGKMDPVIGRDEEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPESLLDKTIFELDLSALVAGAKFRGEFEERLKAVLKEVKESDGRIILFIDEIHMLVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLNEYREYIEKDSALERRFQKVGVSEPDVEDTISILRGLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLEIEESALKNESDNASKHRLEELQEELSNEKEKQASLQSRVEQEKEKIAKVQEKRAELDRSRQVLEDAQTESNYEKAAELQYGTIPQLEKELKEYEEAFHDEQGDNERMIREVVSDEEIGDIVSQWTGIPVSKLVETEREKLLNLSDILHERVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLASSLFDSEKHMIRIDMSEYMEKHSVSRLIGAPPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQILDEGRLTDSKGRSVDFKNTIIIMTSNIGSQILLENVKDSGEITESTEKAVMDSLHAFFKPEILNRMDDIVLFKPLSINDMSMIVDKILTQLNIRLMDQRISIEVSDEAKKWLGEEAYEPQFGARPLKRFVQRQIETPLARMMIKENMPEGTKVNVDLNDSQELTFDVQKSSAE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 66416 69025 . + . GCA_005502385.1_01817_mRNA GCA_005502385.1_01817 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDINQMTYKVQEALQKAIELSKENELQNIEIEAILKGTLEEDESLFKSILERANIDTDQLNQAYSEKLKHYPSVQGDNVQYGQYIGSKANELLNKAESYMKEYEDEYISMEHILRAAMDIDETTQQFVGNKEEVVKEIITKVRGGNHVTSQNPEVNYEALEKYGRDLVEEVRQGKMDPVIGRDEEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPESLLDKTIFELDLSALVAGAKFRGEFEERLKAVLKEVKESDGRIILFIDEIHMLVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLNEYREYIEKDSALERRFQKVGVSEPDVEDTISILRGLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLEIEESALKNESDNASKHRLEELQEELSNEKEKQASLQSRVEQEKEKIAKVQEKRAELDRSRQVLEDAQTESNYEKAAELQYGTIPQLEKELKEYEEAFHDEQGDNERMIREVVSDEEIGDIVSQWTGIPVSKLVETEREKLLNLSDILHERVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLASSLFDSEKHMIRIDMSEYMEKHSVSRLIGAPPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQILDEGRLTDSKGRSVDFKNTIIIMTSNIGSQILLENVKDSGEITESTEKAVMDSLHAFFKPEILNRMDDIVLFKPLSINDMSMIVDKILTQLNIRLMDQRISIEVSDEAKKWLGEEAYEPQFGARPLKRFVQRQIETPLARMMIKENMPEGTKVNVDLNDSQELTFDVQKSSAE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 66416 69025 . + 0 GCA_005502385.1_01817 GCA_005502385.1_01817_gene,GCA_005502385.1_01817_mRNA GCA_005502385.1_01817 Chaperone protein ClpB GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDINQMTYKVQEALQKAIELSKENELQNIEIEAILKGTLEEDESLFKSILERANIDTDQLNQAYSEKLKHYPSVQGDNVQYGQYIGSKANELLNKAESYMKEYEDEYISMEHILRAAMDIDETTQQFVGNKEEVVKEIITKVRGGNHVTSQNPEVNYEALEKYGRDLVEEVRQGKMDPVIGRDEEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPESLLDKTIFELDLSALVAGAKFRGEFEERLKAVLKEVKESDGRIILFIDEIHMLVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLNEYREYIEKDSALERRFQKVGVSEPDVEDTISILRGLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLEIEESALKNESDNASKHRLEELQEELSNEKEKQASLQSRVEQEKEKIAKVQEKRAELDRSRQVLEDAQTESNYEKAAELQYGTIPQLEKELKEYEEAFHDEQGDNERMIREVVSDEEIGDIVSQWTGIPVSKLVETEREKLLNLSDILHERVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLASSLFDSEKHMIRIDMSEYMEKHSVSRLIGAPPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQILDEGRLTDSKGRSVDFKNTIIIMTSNIGSQILLENVKDSGEITESTEKAVMDSLHAFFKPEILNRMDDIVLFKPLSINDMSMIVDKILTQLNIRLMDQRISIEVSDEAKKWLGEEAYEPQFGARPLKRFVQRQIETPLARMMIKENMPEGTKVNVDLNDSQELTFDVQKSSAE persistent 869 clpB ATP-dependent chaperone ClpB GO:0005524,GO:0005737,GO:0009408,GO:0016887,GO:0034605,GO:0042026 COG0542,O WP_137689640.1 UPI0010F962B1 UniRef100_UPI0010F962B1,UniRef50_Q8CPT5,UniRef90_Q8CPT5 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 69127 69327 . - . GCA_005502385.1_01818_gene GCA_005502385.1_01818 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKYLVTFIWALILTQMVNFVLNSLNGGGSLDVIKPIIIAIIITIAIAILGAMIKPNDFARKGNRDV . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 69127 69327 . - . GCA_005502385.1_01818_mRNA GCA_005502385.1_01818 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKYLVTFIWALILTQMVNFVLNSLNGGGSLDVIKPIIIAIIITIAIAILGAMIKPNDFARKGNRDV . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 69127 69327 . - 0 GCA_005502385.1_01818 GCA_005502385.1_01818_gene,GCA_005502385.1_01818_mRNA GCA_005502385.1_01818 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKYLVTFIWALILTQMVNFVLNSLNGGGSLDVIKPIIIAIIITIAIAILGAMIKPNDFARKGNRDV persistent 66 DUF2929 domain-containing protein WP_017175830.1 UPI0002F2A707 UniRef100_A0A4V6MZG2,UniRef50_Q2FZS1,UniRef90_A0A657M1X8 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 69553 70494 . + . GCA_005502385.1_01819_gene GCA_005502385.1_01819 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNVGIKGFGAYAPERVVDNAYFEGFLDTSDEWISKMTGIKERRWSRDDQDTSDLAYEASKKAIEDAGIKPNDIDMIIVATATGDMPFPSVANILQEKLGTGKVPTMDQLAACSGFMYSMITAKQYVQSGDYKNILVVGADKLSKITDLTDRSTAVLFGDGAGAVVIGEVSEGRGIISYEIGSDGSGGKYLYLNKETGKLVMNGREVFKFAVRIMGEASTRVVEKAGLESDDIDMFIPHQANIRIMESARERLGIEREKMSVSVNRFGNTSAASIPLSIQQELENGRIKDDDTLVLVGFGGGLTWGAMVIKWGK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 69553 70494 . + . GCA_005502385.1_01819_mRNA GCA_005502385.1_01819 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNVGIKGFGAYAPERVVDNAYFEGFLDTSDEWISKMTGIKERRWSRDDQDTSDLAYEASKKAIEDAGIKPNDIDMIIVATATGDMPFPSVANILQEKLGTGKVPTMDQLAACSGFMYSMITAKQYVQSGDYKNILVVGADKLSKITDLTDRSTAVLFGDGAGAVVIGEVSEGRGIISYEIGSDGSGGKYLYLNKETGKLVMNGREVFKFAVRIMGEASTRVVEKAGLESDDIDMFIPHQANIRIMESARERLGIEREKMSVSVNRFGNTSAASIPLSIQQELENGRIKDDDTLVLVGFGGGLTWGAMVIKWGK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 69553 70494 . + 0 GCA_005502385.1_01819 GCA_005502385.1_01819_gene,GCA_005502385.1_01819_mRNA GCA_005502385.1_01819 3-oxoacyl-[acyl-carrier-protein] synthase 3 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNVGIKGFGAYAPERVVDNAYFEGFLDTSDEWISKMTGIKERRWSRDDQDTSDLAYEASKKAIEDAGIKPNDIDMIIVATATGDMPFPSVANILQEKLGTGKVPTMDQLAACSGFMYSMITAKQYVQSGDYKNILVVGADKLSKITDLTDRSTAVLFGDGAGAVVIGEVSEGRGIISYEIGSDGSGGKYLYLNKETGKLVMNGREVFKFAVRIMGEASTRVVEKAGLESDDIDMFIPHQANIRIMESARERLGIEREKMSVSVNRFGNTSAASIPLSIQQELENGRIKDDDTLVLVGFGGGLTWGAMVIKWGK persistent 313 fabH Beta-ketoacyl-[acyl-carrier-protein] synthase III 2.3.1.180 GO:0004315,GO:0005737,GO:0006633,GO:0033818 COG0332,I WP_017175829.1 UPI0002EB3435 UniRef100_A0A3S7GTP2,UniRef50_P68795,UniRef90_Q4L4Z3 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 70508 71752 . + . GCA_005502385.1_01820_gene GCA_005502385.1_01820 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTENKRVVITGMGALSPIGNDAQTNWENALKGVNGIDTITRVDTEEYNVHLAGELKDFNIEDHISKKDARRMDRFTQYAVVAARQAVEDANLTINDDNANRIGVWIGSGIGGMETFEVAHTILKNKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGSTVTACATGTNSIGEAFKIIQRGAADAMITGGTEAPITHMALAGFSASRALSTNDDKETACRPFQEGRDGFIMGEGAGILVIESLESAQARGAQIYAEIVGYGSTGDAYHITAPAPEGEGGSRAMQAALDDAGIEAKDIQYLNAHGTSTPVGDLYEIKAIKNTFGDAAKNLKISSTKSMTGHLLGATGGIEAIFSALSIRDSKVAPTIHADSPDPECDLDIVPNEAQDLEIEYAMSNSLGFGGHNAVLVFKKFKD . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 70508 71752 . + . GCA_005502385.1_01820_mRNA GCA_005502385.1_01820 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTENKRVVITGMGALSPIGNDAQTNWENALKGVNGIDTITRVDTEEYNVHLAGELKDFNIEDHISKKDARRMDRFTQYAVVAARQAVEDANLTINDDNANRIGVWIGSGIGGMETFEVAHTILKNKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGSTVTACATGTNSIGEAFKIIQRGAADAMITGGTEAPITHMALAGFSASRALSTNDDKETACRPFQEGRDGFIMGEGAGILVIESLESAQARGAQIYAEIVGYGSTGDAYHITAPAPEGEGGSRAMQAALDDAGIEAKDIQYLNAHGTSTPVGDLYEIKAIKNTFGDAAKNLKISSTKSMTGHLLGATGGIEAIFSALSIRDSKVAPTIHADSPDPECDLDIVPNEAQDLEIEYAMSNSLGFGGHNAVLVFKKFKD . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 70508 71752 . + 0 GCA_005502385.1_01820 GCA_005502385.1_01820_gene,GCA_005502385.1_01820_mRNA GCA_005502385.1_01820 3-oxoacyl-[acyl-carrier-protein] synthase 2 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTENKRVVITGMGALSPIGNDAQTNWENALKGVNGIDTITRVDTEEYNVHLAGELKDFNIEDHISKKDARRMDRFTQYAVVAARQAVEDANLTINDDNANRIGVWIGSGIGGMETFEVAHTILKNKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGSTVTACATGTNSIGEAFKIIQRGAADAMITGGTEAPITHMALAGFSASRALSTNDDKETACRPFQEGRDGFIMGEGAGILVIESLESAQARGAQIYAEIVGYGSTGDAYHITAPAPEGEGGSRAMQAALDDAGIEAKDIQYLNAHGTSTPVGDLYEIKAIKNTFGDAAKNLKISSTKSMTGHLLGATGGIEAIFSALSIRDSKVAPTIHADSPDPECDLDIVPNEAQDLEIEYAMSNSLGFGGHNAVLVFKKFKD persistent 414 fabF beta-ketoacyl-ACP synthase II 2.3.1.179 GO:0004315,GO:0006633 COG0304,IQ WP_049382334.1 UPI00066EDE2E UniRef100_UPI00066EDE2E,UniRef50_O34340,UniRef90_A0A2A1K7Q8 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 71805 72182 . - . GCA_005502385.1_01821_gene GCA_005502385.1_01821 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNNIKTWFIWLFLPLICTFLLWMFVTQHSFVSFINILFYISLVLFILLFLILLVQEGIFDATSFGFRRMRYQLASRSKKKTLENDDFFNPKQVKKEHYTISTWLLPALILCAFYFILTILISLFL . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 71805 72182 . - . GCA_005502385.1_01821_mRNA GCA_005502385.1_01821 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNNIKTWFIWLFLPLICTFLLWMFVTQHSFVSFINILFYISLVLFILLFLILLVQEGIFDATSFGFRRMRYQLASRSKKKTLENDDFFNPKQVKKEHYTISTWLLPALILCAFYFILTILISLFL . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 71805 72182 . - 0 GCA_005502385.1_01821 GCA_005502385.1_01821_gene,GCA_005502385.1_01821_mRNA GCA_005502385.1_01821 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNNIKTWFIWLFLPLICTFLLWMFVTQHSFVSFINILFYISLVLFILLFLILLVQEGIFDATSFGFRRMRYQLASRSKKKTLENDDFFNPKQVKKEHYTISTWLLPALILCAFYFILTILISLFL persistent 125 DUF3899 domain-containing protein WP_017175827.1 UPI000307DA25 UniRef100_A0A3S7GTK8,UniRef50_A0A2A1K8E2,UniRef90_A0AAE5MYS8 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 72411 73340 . + . GCA_005502385.1_01822_gene GCA_005502385.1_01822 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MMTRYILKRLGYMVLSLFIIITITFFLMKMMPGSPFNDAKLSAEQKAILNEKYGLNDPVAVQYLHYLKNVVTGDFGYSFQYHNQPVWSLIKPRLIPSMEMGITAMIIGVILGLILGVAAATKQNTWVDYTTTVISVIAVSVPSFVLAVLLQYVFAVRLRWFPVAGWEGFSTAVLPSLALSASVMATVARYIRAEMIEVLSSDYILLARAKGNSPIRVLFGHALRNALIPIITIIVPMLAGILTGTLTIENIFGVPGLGDQFVRSITTNDFSVIMATTILFSTLFIVSIFIVDILYGVIDPRIRVQGGKK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 72411 73340 . + . GCA_005502385.1_01822_mRNA GCA_005502385.1_01822 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MMTRYILKRLGYMVLSLFIIITITFFLMKMMPGSPFNDAKLSAEQKAILNEKYGLNDPVAVQYLHYLKNVVTGDFGYSFQYHNQPVWSLIKPRLIPSMEMGITAMIIGVILGLILGVAAATKQNTWVDYTTTVISVIAVSVPSFVLAVLLQYVFAVRLRWFPVAGWEGFSTAVLPSLALSASVMATVARYIRAEMIEVLSSDYILLARAKGNSPIRVLFGHALRNALIPIITIIVPMLAGILTGTLTIENIFGVPGLGDQFVRSITTNDFSVIMATTILFSTLFIVSIFIVDILYGVIDPRIRVQGGKK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 72411 73340 . + 0 GCA_005502385.1_01822 GCA_005502385.1_01822_gene,GCA_005502385.1_01822_mRNA GCA_005502385.1_01822 Oligopeptide transport system permease protein OppB GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MMTRYILKRLGYMVLSLFIIITITFFLMKMMPGSPFNDAKLSAEQKAILNEKYGLNDPVAVQYLHYLKNVVTGDFGYSFQYHNQPVWSLIKPRLIPSMEMGITAMIIGVILGLILGVAAATKQNTWVDYTTTVISVIAVSVPSFVLAVLLQYVFAVRLRWFPVAGWEGFSTAVLPSLALSASVMATVARYIRAEMIEVLSSDYILLARAKGNSPIRVLFGHALRNALIPIITIIVPMLAGILTGTLTIENIFGVPGLGDQFVRSITTNDFSVIMATTILFSTLFIVSIFIVDILYGVIDPRIRVQGGKK persistent 309 opp3b oligopeptide ABC transporter permease GO:0043190,GO:0140359 COG0601,EP UniRef50_Q2FZR7,UniRef90_Q2FZR7 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 73340 74404 . + . GCA_005502385.1_01823_gene GCA_005502385.1_01823 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MPENFNKPFDDHSNAAMSHTSEGAVGTDFVIRELDLNKEPEIQRESKNFWQDAWTQLKRNKLAIVGLIGLILIVILAFLGPAFSKHDYAEQDVTRRNLPAKIPVLDQVHFLPFDGTGADGKSAYKEAGVKENFWFGTDQLGRDLWTRTWKGAQISLFIGIVAAALDIFIGVVYGAISGFFGGRVDNVMQRILEIIASIPNLIIVILFVLIFEPSIWTIILAMSITGWLGMSRVVRGEFLKLKSQEFVMASRTLGASKFKLIFKHILPNTLGAIVVTSMFTVPSAIFFEAFLSFIGIGVPAPKTSLGSLVNDGRAMLLIHPHELFIPATVLSLLILFFYLFSDGLRDAFDPKMRK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 73340 74404 . + . GCA_005502385.1_01823_mRNA GCA_005502385.1_01823 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MPENFNKPFDDHSNAAMSHTSEGAVGTDFVIRELDLNKEPEIQRESKNFWQDAWTQLKRNKLAIVGLIGLILIVILAFLGPAFSKHDYAEQDVTRRNLPAKIPVLDQVHFLPFDGTGADGKSAYKEAGVKENFWFGTDQLGRDLWTRTWKGAQISLFIGIVAAALDIFIGVVYGAISGFFGGRVDNVMQRILEIIASIPNLIIVILFVLIFEPSIWTIILAMSITGWLGMSRVVRGEFLKLKSQEFVMASRTLGASKFKLIFKHILPNTLGAIVVTSMFTVPSAIFFEAFLSFIGIGVPAPKTSLGSLVNDGRAMLLIHPHELFIPATVLSLLILFFYLFSDGLRDAFDPKMRK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 73340 74404 . + 0 GCA_005502385.1_01823 GCA_005502385.1_01823_gene,GCA_005502385.1_01823_mRNA GCA_005502385.1_01823 Oligopeptide transport system permease protein OppC GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MPENFNKPFDDHSNAAMSHTSEGAVGTDFVIRELDLNKEPEIQRESKNFWQDAWTQLKRNKLAIVGLIGLILIVILAFLGPAFSKHDYAEQDVTRRNLPAKIPVLDQVHFLPFDGTGADGKSAYKEAGVKENFWFGTDQLGRDLWTRTWKGAQISLFIGIVAAALDIFIGVVYGAISGFFGGRVDNVMQRILEIIASIPNLIIVILFVLIFEPSIWTIILAMSITGWLGMSRVVRGEFLKLKSQEFVMASRTLGASKFKLIFKHILPNTLGAIVVTSMFTVPSAIFFEAFLSFIGIGVPAPKTSLGSLVNDGRAMLLIHPHELFIPATVLSLLILFFYLFSDGLRDAFDPKMRK persistent 354 opp3C oligopeptide ABC transporter permease GO:0043190,GO:0140359 WP_048761203.1 UPI00066078F5 UniRef100_A0A8I0WB09,UniRef50_B9DIT6,UniRef90_A0A8X8KK35 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 74422 75507 . + . GCA_005502385.1_01824_gene GCA_005502385.1_01824 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSERVLEVNNLHVSFDITAGEVQAVRGVDFFLNKGETLAIVGESGSGKSVTTKAITKLFQGDTGRIKKGTINFLGEDLAIKSEKELNKLRGKDISMIFQDPMTSLNPTMQIGKQVMEPLIKHRHYSKSEAKKRALEILNLVGLPNAEKRFKAYPHQFSGGQRQRIVIATALACEPKILIADEPTTALDVTMQAQILDLMKELQQKIETSIIFITHDLGVVANVADRVAVMYGGQMIETGNVDEIFYDPKHPYTWGLLSSMPDLTTSNETELIAIPGTPPDLLHPPKGDAFARRSQYALDIDFKEVPPWFKISPTHYVKSWLLDERAPKVEPPEMVQKRQRQMPNNYDKPRRVERVSFDGEE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 74422 75507 . + . GCA_005502385.1_01824_mRNA GCA_005502385.1_01824 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSERVLEVNNLHVSFDITAGEVQAVRGVDFFLNKGETLAIVGESGSGKSVTTKAITKLFQGDTGRIKKGTINFLGEDLAIKSEKELNKLRGKDISMIFQDPMTSLNPTMQIGKQVMEPLIKHRHYSKSEAKKRALEILNLVGLPNAEKRFKAYPHQFSGGQRQRIVIATALACEPKILIADEPTTALDVTMQAQILDLMKELQQKIETSIIFITHDLGVVANVADRVAVMYGGQMIETGNVDEIFYDPKHPYTWGLLSSMPDLTTSNETELIAIPGTPPDLLHPPKGDAFARRSQYALDIDFKEVPPWFKISPTHYVKSWLLDERAPKVEPPEMVQKRQRQMPNNYDKPRRVERVSFDGEE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 74422 75507 . + 0 GCA_005502385.1_01824 GCA_005502385.1_01824_gene,GCA_005502385.1_01824_mRNA GCA_005502385.1_01824 Oligopeptide transport ATP-binding protein OppD GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSERVLEVNNLHVSFDITAGEVQAVRGVDFFLNKGETLAIVGESGSGKSVTTKAITKLFQGDTGRIKKGTINFLGEDLAIKSEKELNKLRGKDISMIFQDPMTSLNPTMQIGKQVMEPLIKHRHYSKSEAKKRALEILNLVGLPNAEKRFKAYPHQFSGGQRQRIVIATALACEPKILIADEPTTALDVTMQAQILDLMKELQQKIETSIIFITHDLGVVANVADRVAVMYGGQMIETGNVDEIFYDPKHPYTWGLLSSMPDLTTSNETELIAIPGTPPDLLHPPKGDAFARRSQYALDIDFKEVPPWFKISPTHYVKSWLLDERAPKVEPPEMVQKRQRQMPNNYDKPRRVERVSFDGEE persistent 361 dppD Oligopeptide ABC transporter ATP-binding protein COG0444,EP WP_019835660.1 UPI0003646A4B UniRef100_A0A8I0W8F1,UniRef50_A0A3N2DP85,UniRef90_A0A380G3Y8 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 75494 76444 . + . GCA_005502385.1_01825_gene GCA_005502385.1_01825 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MEKNKEILLEIKNLKQYFNEGKRNEVRAIEDISFNIYKGETLGLVGESGCGKSTTGKAIIKLNDITDGEILYEGQDIQKIAKRKDLLKFNKKIQMIFQDPYASLNPRLKVMDIVAEGIDIHKLASDKKDRKRRVYDLLETVGLSKEHANRYPHEFSGGQRQRIGIARALAVEPEFIIADEPISALDVSIQAQVVNLMLKLQKERGITFLFIAHDLSMVKYISDRIAVMHFGKIVELGSSDEIYYHPLHDYTKSLLSAIPQPDPDSERTRKRIVYEEDESKNAERRLQEIRPNHYVFVTDEEAVRLKEQDQIHLQHN . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 75494 76444 . + . GCA_005502385.1_01825_mRNA GCA_005502385.1_01825 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MEKNKEILLEIKNLKQYFNEGKRNEVRAIEDISFNIYKGETLGLVGESGCGKSTTGKAIIKLNDITDGEILYEGQDIQKIAKRKDLLKFNKKIQMIFQDPYASLNPRLKVMDIVAEGIDIHKLASDKKDRKRRVYDLLETVGLSKEHANRYPHEFSGGQRQRIGIARALAVEPEFIIADEPISALDVSIQAQVVNLMLKLQKERGITFLFIAHDLSMVKYISDRIAVMHFGKIVELGSSDEIYYHPLHDYTKSLLSAIPQPDPDSERTRKRIVYEEDESKNAERRLQEIRPNHYVFVTDEEAVRLKEQDQIHLQHN . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 75494 76444 . + 0 GCA_005502385.1_01825 GCA_005502385.1_01825_gene,GCA_005502385.1_01825_mRNA GCA_005502385.1_01825 Oligopeptide transport ATP-binding protein OppF GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MEKNKEILLEIKNLKQYFNEGKRNEVRAIEDISFNIYKGETLGLVGESGCGKSTTGKAIIKLNDITDGEILYEGQDIQKIAKRKDLLKFNKKIQMIFQDPYASLNPRLKVMDIVAEGIDIHKLASDKKDRKRRVYDLLETVGLSKEHANRYPHEFSGGQRQRIGIARALAVEPEFIIADEPISALDVSIQAQVVNLMLKLQKERGITFLFIAHDLSMVKYISDRIAVMHFGKIVELGSSDEIYYHPLHDYTKSLLSAIPQPDPDSERTRKRIVYEEDESKNAERRLQEIRPNHYVFVTDEEAVRLKEQDQIHLQHN persistent 316 dppD Oligopeptide transport system ATP-binding protein OppF COG0444,EP WP_017175824.1 UPI0002D2AAA1 UniRef100_A0A3S7GTA7,UniRef50_P24137,UniRef90_A0A380G2Y5 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 76472 78139 . + . GCA_005502385.1_01826_gene GCA_005502385.1_01826 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKKINFKVILGLIVTTLLLSACGKGGGLYDDSGQTYRVATSSDMNTLDTVLATDTVSFTIYNQVFEGLYTLNGKDEAIPGIAKGDPKESNNGKTLTIKLRKNAKWSNGDPVTAHDFVFAWRKAVDPKTASEYAYIMYDIKNAEDINLGKHGKKPKDLGIKALDDYTLKIDLTKPIPYFKQMLAFGTFMPQNEKAVKKYGDKYGTTAEKVVYNGPFKVSKWAVEDKIMLTKNDNYWDKKAVKLDRVNYKILKDTQAGASLYDTNSVDSAGITSEQVDKYKDDPGLFKRLIASTFFLKMNEKQQPEFKNRDMRLAIAQSVNKRDYVNEVLGTGAKPFDGFTARDTVKTPEGKDYASTVKSPLKFNPKEAKQHLNKAKKALGKDKFTFTLNTEDTPDSKISAEFIKSQIESNLPGVTVKIKQLPFKQRVEAELSMNYSMSLSGWGPDYPDPTTFLDTMTTGNAQNNTGWGSKEYDNLLKKANGELLQKPKERFATMRQAEELFLNDAPVAPIYQKGTATLRNPQVKGIEYHQIGGDYSLKHVYIDKSIDRETGKKKDN . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 76472 78139 . + . GCA_005502385.1_01826_mRNA GCA_005502385.1_01826 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKKINFKVILGLIVTTLLLSACGKGGGLYDDSGQTYRVATSSDMNTLDTVLATDTVSFTIYNQVFEGLYTLNGKDEAIPGIAKGDPKESNNGKTLTIKLRKNAKWSNGDPVTAHDFVFAWRKAVDPKTASEYAYIMYDIKNAEDINLGKHGKKPKDLGIKALDDYTLKIDLTKPIPYFKQMLAFGTFMPQNEKAVKKYGDKYGTTAEKVVYNGPFKVSKWAVEDKIMLTKNDNYWDKKAVKLDRVNYKILKDTQAGASLYDTNSVDSAGITSEQVDKYKDDPGLFKRLIASTFFLKMNEKQQPEFKNRDMRLAIAQSVNKRDYVNEVLGTGAKPFDGFTARDTVKTPEGKDYASTVKSPLKFNPKEAKQHLNKAKKALGKDKFTFTLNTEDTPDSKISAEFIKSQIESNLPGVTVKIKQLPFKQRVEAELSMNYSMSLSGWGPDYPDPTTFLDTMTTGNAQNNTGWGSKEYDNLLKKANGELLQKPKERFATMRQAEELFLNDAPVAPIYQKGTATLRNPQVKGIEYHQIGGDYSLKHVYIDKSIDRETGKKKDN . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 76472 78139 . + 0 GCA_005502385.1_01826 GCA_005502385.1_01826_gene,GCA_005502385.1_01826_mRNA GCA_005502385.1_01826 Dipeptide-binding protein DppE GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKKINFKVILGLIVTTLLLSACGKGGGLYDDSGQTYRVATSSDMNTLDTVLATDTVSFTIYNQVFEGLYTLNGKDEAIPGIAKGDPKESNNGKTLTIKLRKNAKWSNGDPVTAHDFVFAWRKAVDPKTASEYAYIMYDIKNAEDINLGKHGKKPKDLGIKALDDYTLKIDLTKPIPYFKQMLAFGTFMPQNEKAVKKYGDKYGTTAEKVVYNGPFKVSKWAVEDKIMLTKNDNYWDKKAVKLDRVNYKILKDTQAGASLYDTNSVDSAGITSEQVDKYKDDPGLFKRLIASTFFLKMNEKQQPEFKNRDMRLAIAQSVNKRDYVNEVLGTGAKPFDGFTARDTVKTPEGKDYASTVKSPLKFNPKEAKQHLNKAKKALGKDKFTFTLNTEDTPDSKISAEFIKSQIESNLPGVTVKIKQLPFKQRVEAELSMNYSMSLSGWGPDYPDPTTFLDTMTTGNAQNNTGWGSKEYDNLLKKANGELLQKPKERFATMRQAEELFLNDAPVAPIYQKGTATLRNPQVKGIEYHQIGGDYSLKHVYIDKSIDRETGKKKDN shell 555 Peptide ABC transporter substrate-binding protein WP_037541182.1 UPI00044638C9 UniRef100_A0A3S7GT40,UniRef50_S2XM61,UniRef90_A0A3S7GT40 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 78305 80017 . + . GCA_005502385.1_01827_gene GCA_005502385.1_01827 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKVIGKYLILLLVAILVLSGCGKGGGNSKDATTSKTETSNHKGGVLNVALNAAPSGTLSSLLSSDASDSSVENYFNEVLIKLDKNLKPKPYIASWKDIDPGKKIKFSIKKGIKWHDGNELTIDDWIYSLNVLADKDYNGNYYPVVENIEGSKEKHEGQADSISGIKKVDKYTMEVTFKDKKVNYLESFFAGPLLSKKYLSDVPVKDLAKSDKVRKHPIGIGPYKVKKVVQGEAVQLEKFNDYWQGKPGLDKINLKVIDQTQIVKAMKNGEIDMTDSTTGSIAQEAKKSGDGKLKVLSTPGTDYAVIGFVSHDYDKDKNKTGAERPKYKEKELRQAMLYAIDRKKWIKAFYQGYGKELNSFVPSIHWIAANQKDLNDYNYDPEKAKKILDKLGYKDRNGDGFREDPNGKPFEINLKHYSGSNPTFEPRTAAIKDFWEKVGLKTNVKMVEFGKYNDDLAQASKDMEVYFRTWTGGSDPDPSDLYHSDRPQNEMRTTDKTSDKLLDDALDFSKVGNNDKKRKKIYLEWQKHTNDTLPALPIVQLDTLTVVNDKVKNVDIKIGSDMDLYKLTKE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 78305 80017 . + . GCA_005502385.1_01827_mRNA GCA_005502385.1_01827 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKVIGKYLILLLVAILVLSGCGKGGGNSKDATTSKTETSNHKGGVLNVALNAAPSGTLSSLLSSDASDSSVENYFNEVLIKLDKNLKPKPYIASWKDIDPGKKIKFSIKKGIKWHDGNELTIDDWIYSLNVLADKDYNGNYYPVVENIEGSKEKHEGQADSISGIKKVDKYTMEVTFKDKKVNYLESFFAGPLLSKKYLSDVPVKDLAKSDKVRKHPIGIGPYKVKKVVQGEAVQLEKFNDYWQGKPGLDKINLKVIDQTQIVKAMKNGEIDMTDSTTGSIAQEAKKSGDGKLKVLSTPGTDYAVIGFVSHDYDKDKNKTGAERPKYKEKELRQAMLYAIDRKKWIKAFYQGYGKELNSFVPSIHWIAANQKDLNDYNYDPEKAKKILDKLGYKDRNGDGFREDPNGKPFEINLKHYSGSNPTFEPRTAAIKDFWEKVGLKTNVKMVEFGKYNDDLAQASKDMEVYFRTWTGGSDPDPSDLYHSDRPQNEMRTTDKTSDKLLDDALDFSKVGNNDKKRKKIYLEWQKHTNDTLPALPIVQLDTLTVVNDKVKNVDIKIGSDMDLYKLTKE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 78305 80017 . + 0 GCA_005502385.1_01827 GCA_005502385.1_01827_gene,GCA_005502385.1_01827_mRNA GCA_005502385.1_01827 Oligopeptide-binding protein AppA GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKVIGKYLILLLVAILVLSGCGKGGGNSKDATTSKTETSNHKGGVLNVALNAAPSGTLSSLLSSDASDSSVENYFNEVLIKLDKNLKPKPYIASWKDIDPGKKIKFSIKKGIKWHDGNELTIDDWIYSLNVLADKDYNGNYYPVVENIEGSKEKHEGQADSISGIKKVDKYTMEVTFKDKKVNYLESFFAGPLLSKKYLSDVPVKDLAKSDKVRKHPIGIGPYKVKKVVQGEAVQLEKFNDYWQGKPGLDKINLKVIDQTQIVKAMKNGEIDMTDSTTGSIAQEAKKSGDGKLKVLSTPGTDYAVIGFVSHDYDKDKNKTGAERPKYKEKELRQAMLYAIDRKKWIKAFYQGYGKELNSFVPSIHWIAANQKDLNDYNYDPEKAKKILDKLGYKDRNGDGFREDPNGKPFEINLKHYSGSNPTFEPRTAAIKDFWEKVGLKTNVKMVEFGKYNDDLAQASKDMEVYFRTWTGGSDPDPSDLYHSDRPQNEMRTTDKTSDKLLDDALDFSKVGNNDKKRKKIYLEWQKHTNDTLPALPIVQLDTLTVVNDKVKNVDIKIGSDMDLYKLTKE shell 570 opp4A oligopeptide ABC transporter substrate-binding protein GO:0043190,GO:0140359 WP_017175822.1 UPI0002F33363 UniRef100_A0A3S7GXW7,UniRef50_B9DPB0,UniRef90_A0A3S7GXW7 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 80066 81037 . + . GCA_005502385.1_01828_gene GCA_005502385.1_01828 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDKYLLEIKDLETSIKIENKWYPTIDQISLNLEKNEILGVVGESGCGKSILNKSIIRLLPDRISKITNGKVIFDSKDLTKITEKEYQNIRGKEIGMIFQEPMTALNPVFKIKEQIIEPIILHLKKNKKEAYQLAKQLLEDVGIARVEEVLNSYPHQLSGGMRQRVMIAIAISCNPKLLIADEPTTALDVTVQAQILDLLKKLQRKNKMSIILVTHDLSVVSEFCDSVMVMYAGQIVEYGNLKDVIVNPKHPYTKKLLNTIPKLDEDTEYLEVIEGLVPNITEFNNKQCRFVNRCPKKMNICSQCEPRILNINNSKVRCHLFND . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 80066 81037 . + . GCA_005502385.1_01828_mRNA GCA_005502385.1_01828 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDKYLLEIKDLETSIKIENKWYPTIDQISLNLEKNEILGVVGESGCGKSILNKSIIRLLPDRISKITNGKVIFDSKDLTKITEKEYQNIRGKEIGMIFQEPMTALNPVFKIKEQIIEPIILHLKKNKKEAYQLAKQLLEDVGIARVEEVLNSYPHQLSGGMRQRVMIAIAISCNPKLLIADEPTTALDVTVQAQILDLLKKLQRKNKMSIILVTHDLSVVSEFCDSVMVMYAGQIVEYGNLKDVIVNPKHPYTKKLLNTIPKLDEDTEYLEVIEGLVPNITEFNNKQCRFVNRCPKKMNICSQCEPRILNINNSKVRCHLFND . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 80066 81037 . + 0 GCA_005502385.1_01828 GCA_005502385.1_01828_gene,GCA_005502385.1_01828_mRNA GCA_005502385.1_01828 Oligopeptide transport ATP-binding protein OppD GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDKYLLEIKDLETSIKIENKWYPTIDQISLNLEKNEILGVVGESGCGKSILNKSIIRLLPDRISKITNGKVIFDSKDLTKITEKEYQNIRGKEIGMIFQEPMTALNPVFKIKEQIIEPIILHLKKNKKEAYQLAKQLLEDVGIARVEEVLNSYPHQLSGGMRQRVMIAIAISCNPKLLIADEPTTALDVTVQAQILDLLKKLQRKNKMSIILVTHDLSVVSEFCDSVMVMYAGQIVEYGNLKDVIVNPKHPYTKKLLNTIPKLDEDTEYLEVIEGLVPNITEFNNKQCRFVNRCPKKMNICSQCEPRILNINNSKVRCHLFND shell 323 ABC transporter ATP-binding protein WP_049419757.1 UPI00066E5B8D UniRef100_UPI00066E5B8D,UniRef50_A0A8T7JET3,UniRef90_A0A3S7GWH3 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 81052 82020 . + . GCA_005502385.1_01829_gene GCA_005502385.1_01829 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDYILEIQNLKTYYSIKNGLFKKNQYVKAVDNITLKIKKGQTFGLVGESGCGKSTLGKSVVRLENITSGDIKICGRSITKLKGKELRNARKDFQMIFQDPYASLNPMQMVGDIVGEPLLNYHLVDKKNLKDEVLYLLKCVGMSEDAYYKYAHQFSGGQRQRIGIARALAIRPKLIVADEPVSALDVSVQSQVLNLLKDLQKEFSLSYLFIAHDLSVVKHISDVIGVMYLGHLVEIADSHELYTHAYHPYTKALISSIPQFNKQKSNRVILNGELPSPSNPPQGCPFHTRCPIAKKICSEKRPKLKEIKPNHYVACFYSEGGE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 81052 82020 . + . GCA_005502385.1_01829_mRNA GCA_005502385.1_01829 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDYILEIQNLKTYYSIKNGLFKKNQYVKAVDNITLKIKKGQTFGLVGESGCGKSTLGKSVVRLENITSGDIKICGRSITKLKGKELRNARKDFQMIFQDPYASLNPMQMVGDIVGEPLLNYHLVDKKNLKDEVLYLLKCVGMSEDAYYKYAHQFSGGQRQRIGIARALAIRPKLIVADEPVSALDVSVQSQVLNLLKDLQKEFSLSYLFIAHDLSVVKHISDVIGVMYLGHLVEIADSHELYTHAYHPYTKALISSIPQFNKQKSNRVILNGELPSPSNPPQGCPFHTRCPIAKKICSEKRPKLKEIKPNHYVACFYSEGGE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 81052 82020 . + 0 GCA_005502385.1_01829 GCA_005502385.1_01829_gene,GCA_005502385.1_01829_mRNA GCA_005502385.1_01829 Oligopeptide transport ATP-binding protein OppF GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDYILEIQNLKTYYSIKNGLFKKNQYVKAVDNITLKIKKGQTFGLVGESGCGKSTLGKSVVRLENITSGDIKICGRSITKLKGKELRNARKDFQMIFQDPYASLNPMQMVGDIVGEPLLNYHLVDKKNLKDEVLYLLKCVGMSEDAYYKYAHQFSGGQRQRIGIARALAIRPKLIVADEPVSALDVSVQSQVLNLLKDLQKEFSLSYLFIAHDLSVVKHISDVIGVMYLGHLVEIADSHELYTHAYHPYTKALISSIPQFNKQKSNRVILNGELPSPSNPPQGCPFHTRCPIAKKICSEKRPKLKEIKPNHYVACFYSEGGE shell 322 ATP-binding cassette domain-containing protein WP_049382331.1 UPI00066A4C4D UniRef100_UPI0030C3ACE2,UniRef50_A0A150KNE3,UniRef90_A0A3S7GTN3 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 82022 82984 . + . GCA_005502385.1_01830_gene GCA_005502385.1_01830 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLRLIIKRFLLMIPLLFLISIVVFSLAIIQPGDPFTGQYNPHIKQEAIEAQKEKLGLNDSIPKQYIRWVNNVTHGNLGESIKYKRPVLELISERIPNTILLGTVSLIITYILSFILGIISGRYAYTLSDYTIQIFNYIMLAIPSFIAGVFAIYLFAFQIPIFPFQGSVDINLEEGTFSYYISKIYHTLLPALTLGLLSTAGYIQYLRNDIIDNSNKDYVLTAKAKGLSTNKIYNKHILRNSLIPIITFLGADIVSILGGAVITETIFSFNGIGKLFLESVTGQDYPLMMALTLFFSFLGLFGNLIPDVTYNFIDPRIHSN . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 82022 82984 . + . GCA_005502385.1_01830_mRNA GCA_005502385.1_01830 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLRLIIKRFLLMIPLLFLISIVVFSLAIIQPGDPFTGQYNPHIKQEAIEAQKEKLGLNDSIPKQYIRWVNNVTHGNLGESIKYKRPVLELISERIPNTILLGTVSLIITYILSFILGIISGRYAYTLSDYTIQIFNYIMLAIPSFIAGVFAIYLFAFQIPIFPFQGSVDINLEEGTFSYYISKIYHTLLPALTLGLLSTAGYIQYLRNDIIDNSNKDYVLTAKAKGLSTNKIYNKHILRNSLIPIITFLGADIVSILGGAVITETIFSFNGIGKLFLESVTGQDYPLMMALTLFFSFLGLFGNLIPDVTYNFIDPRIHSN . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 82022 82984 . + 0 GCA_005502385.1_01830 GCA_005502385.1_01830_gene,GCA_005502385.1_01830_mRNA GCA_005502385.1_01830 Glutathione transport system permease protein GsiC GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLRLIIKRFLLMIPLLFLISIVVFSLAIIQPGDPFTGQYNPHIKQEAIEAQKEKLGLNDSIPKQYIRWVNNVTHGNLGESIKYKRPVLELISERIPNTILLGTVSLIITYILSFILGIISGRYAYTLSDYTIQIFNYIMLAIPSFIAGVFAIYLFAFQIPIFPFQGSVDINLEEGTFSYYISKIYHTLLPALTLGLLSTAGYIQYLRNDIIDNSNKDYVLTAKAKGLSTNKIYNKHILRNSLIPIITFLGADIVSILGGAVITETIFSFNGIGKLFLESVTGQDYPLMMALTLFFSFLGLFGNLIPDVTYNFIDPRIHSN shell 320 opp4B oligopeptide ABC transporter permease GO:0043190,GO:0140359 UniRef50_S2XU22,UniRef90_A0A380G0N8 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 83005 83916 . + . GCA_005502385.1_01831_gene GCA_005502385.1_01831 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKKERSSKKNSTKKIYSPTQLALKKFLKNKIAMVSLIFLFFLAIISIIAPLLAPLPINQQDLLNIKGDMSSHNILGTDSGGRDNFSRLLYAGRVSLTIGLTSTIGMLIIGITIGVISGYFGGITDTILMRITEFVMLFPFLIFAIVLNAALGDKIKNPYGSALILIVVIIILSWGGIARLIRGKVMQEKENEYFLAAKSIGTPTHKIILKHLLPNIISVVIVQTTLTFAGMIVVESGLSFLGFGISKSIPSWGNMLSDAQEGDVISSKPWIWMPPALMIMFTILSINFVGEGLKDAFNPKDRR . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 83005 83916 . + . GCA_005502385.1_01831_mRNA GCA_005502385.1_01831 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKKERSSKKNSTKKIYSPTQLALKKFLKNKIAMVSLIFLFFLAIISIIAPLLAPLPINQQDLLNIKGDMSSHNILGTDSGGRDNFSRLLYAGRVSLTIGLTSTIGMLIIGITIGVISGYFGGITDTILMRITEFVMLFPFLIFAIVLNAALGDKIKNPYGSALILIVVIIILSWGGIARLIRGKVMQEKENEYFLAAKSIGTPTHKIILKHLLPNIISVVIVQTTLTFAGMIVVESGLSFLGFGISKSIPSWGNMLSDAQEGDVISSKPWIWMPPALMIMFTILSINFVGEGLKDAFNPKDRR . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 83005 83916 . + 0 GCA_005502385.1_01831 GCA_005502385.1_01831_gene,GCA_005502385.1_01831_mRNA GCA_005502385.1_01831 Dipeptide transport system permease protein DppC GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKKERSSKKNSTKKIYSPTQLALKKFLKNKIAMVSLIFLFFLAIISIIAPLLAPLPINQQDLLNIKGDMSSHNILGTDSGGRDNFSRLLYAGRVSLTIGLTSTIGMLIIGITIGVISGYFGGITDTILMRITEFVMLFPFLIFAIVLNAALGDKIKNPYGSALILIVVIIILSWGGIARLIRGKVMQEKENEYFLAAKSIGTPTHKIILKHLLPNIISVVIVQTTLTFAGMIVVESGLSFLGFGISKSIPSWGNMLSDAQEGDVISSKPWIWMPPALMIMFTILSINFVGEGLKDAFNPKDRR shell 303 opp4C oligopeptide ABC transporter permease GO:0043190,GO:0140359 WP_017175818.1 UPI0002DC4655 UniRef100_A0A3S7GTN2,UniRef50_A0A075RFR8,UniRef90_A0A3S7GTN2 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 83960 84949 . - . GCA_005502385.1_01832_gene GCA_005502385.1_01832 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 METLFSGIQPSGIPTLGNYIGALKQFSDVQNDYNCYFCIVDQHAITVPQDKIKLRKQIRQLAAIYLASGIDPDKSTLFIQSEVPAHVQAGWMLTTISSVGELERMTQYKDKAQKRTDGIPAGLLTYPPLMAADIVIYNTNIVPVGEDQKQHMELTRNLVERFNSRYNDILVKPEIRMPKVGGRVMSLQDPTKKMSKSDDNQKNFISLLDEPNVAAKKIKSAVTDSDGIIKFDKDNKPGISNLLTIYSSLTNKSIKELETQYENEGYGTFKTDLSEVVKDFLVHFQEKYNEFYNSDRLDDILDQGRDKAQKASFKTLKKMERAMGLGRKR . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 83960 84949 . - . GCA_005502385.1_01832_mRNA GCA_005502385.1_01832 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 METLFSGIQPSGIPTLGNYIGALKQFSDVQNDYNCYFCIVDQHAITVPQDKIKLRKQIRQLAAIYLASGIDPDKSTLFIQSEVPAHVQAGWMLTTISSVGELERMTQYKDKAQKRTDGIPAGLLTYPPLMAADIVIYNTNIVPVGEDQKQHMELTRNLVERFNSRYNDILVKPEIRMPKVGGRVMSLQDPTKKMSKSDDNQKNFISLLDEPNVAAKKIKSAVTDSDGIIKFDKDNKPGISNLLTIYSSLTNKSIKELETQYENEGYGTFKTDLSEVVKDFLVHFQEKYNEFYNSDRLDDILDQGRDKAQKASFKTLKKMERAMGLGRKR . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 83960 84949 . - 0 GCA_005502385.1_01832 GCA_005502385.1_01832_gene,GCA_005502385.1_01832_mRNA GCA_005502385.1_01832 Tryptophan--tRNA ligase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 METLFSGIQPSGIPTLGNYIGALKQFSDVQNDYNCYFCIVDQHAITVPQDKIKLRKQIRQLAAIYLASGIDPDKSTLFIQSEVPAHVQAGWMLTTISSVGELERMTQYKDKAQKRTDGIPAGLLTYPPLMAADIVIYNTNIVPVGEDQKQHMELTRNLVERFNSRYNDILVKPEIRMPKVGGRVMSLQDPTKKMSKSDDNQKNFISLLDEPNVAAKKIKSAVTDSDGIIKFDKDNKPGISNLLTIYSSLTNKSIKELETQYENEGYGTFKTDLSEVVKDFLVHFQEKYNEFYNSDRLDDILDQGRDKAQKASFKTLKKMERAMGLGRKR persistent 329 trpS tryptophan--tRNA ligase 6.1.1.2 GO:0000166,GO:0004830,GO:0005524,GO:0006436 COG0180,J WP_017175817.1 UPI00031E64BA UniRef100_A0A4Q9WPY7,UniRef50_P21656,UniRef90_A0A2K0A949 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 85218 85613 . + . GCA_005502385.1_01833_gene GCA_005502385.1_01833 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MVTLFTSPSCTSCRKAKAWLQEHDIPYTERNIFSEHLTIDEIKQILKMTEDGTDEIISTRSKTYQKLNVDIDSLPLQDLYTIIQDNPGLLRRPIILDEKRLQVGYNEDEIRRFLPRKVRTFQLQEAQRLVD . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 85218 85613 . + . GCA_005502385.1_01833_mRNA GCA_005502385.1_01833 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MVTLFTSPSCTSCRKAKAWLQEHDIPYTERNIFSEHLTIDEIKQILKMTEDGTDEIISTRSKTYQKLNVDIDSLPLQDLYTIIQDNPGLLRRPIILDEKRLQVGYNEDEIRRFLPRKVRTFQLQEAQRLVD . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 85218 85613 . + 0 GCA_005502385.1_01833 GCA_005502385.1_01833_gene,GCA_005502385.1_01833_mRNA GCA_005502385.1_01833 Regulatory protein Spx GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MVTLFTSPSCTSCRKAKAWLQEHDIPYTERNIFSEHLTIDEIKQILKMTEDGTDEIISTRSKTYQKLNVDIDSLPLQDLYTIIQDNPGLLRRPIILDEKRLQVGYNEDEIRRFLPRKVRTFQLQEAQRLVD persistent 131 spxA transcriptional regulator SpxA GO:0005737,GO:0045892 COG1393,P WP_002448146.1 UPI00019FC78A UniRef100_A0A1L8Y6X3,UniRef50_O31602,UniRef90_Q2G1U6 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 85812 86531 . + . GCA_005502385.1_01834_gene GCA_005502385.1_01834 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MRIERVDDTTVKLFITYGDIEARGFSREDLWTNRKRGEEFFWSMMDEINEEEDFVVEGPLWIQVHAFEKGVEVTISKSKNEEAMNMSDNHANEQFEEQVNELLANTLEQEESIEDLFEQRAQQKQAHKSKRKSSQQRSSLRTIIVKFEDLEEVIHYAYHHNLSTDEFEDLLYMSDSHYYYAIHFDSTVSQETINDSYSQLLEFAYPSDKTEVYLNDYAKIIMSHNVTSQVRRYFTDSVE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 85812 86531 . + . GCA_005502385.1_01834_mRNA GCA_005502385.1_01834 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MRIERVDDTTVKLFITYGDIEARGFSREDLWTNRKRGEEFFWSMMDEINEEEDFVVEGPLWIQVHAFEKGVEVTISKSKNEEAMNMSDNHANEQFEEQVNELLANTLEQEESIEDLFEQRAQQKQAHKSKRKSSQQRSSLRTIIVKFEDLEEVIHYAYHHNLSTDEFEDLLYMSDSHYYYAIHFDSTVSQETINDSYSQLLEFAYPSDKTEVYLNDYAKIIMSHNVTSQVRRYFTDSVE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 85812 86531 . + 0 GCA_005502385.1_01834 GCA_005502385.1_01834_gene,GCA_005502385.1_01834_mRNA GCA_005502385.1_01834 Adapter protein MecA GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MRIERVDDTTVKLFITYGDIEARGFSREDLWTNRKRGEEFFWSMMDEINEEEDFVVEGPLWIQVHAFEKGVEVTISKSKNEEAMNMSDNHANEQFEEQVNELLANTLEQEESIEDLFEQRAQQKQAHKSKRKSSQQRSSLRTIIVKFEDLEEVIHYAYHHNLSTDEFEDLLYMSDSHYYYAIHFDSTVSQETINDSYSQLLEFAYPSDKTEVYLNDYAKIIMSHNVTSQVRRYFTDSVE persistent 239 mecA adaptor protein MecA WP_048761209.1 UPI0006607D43 UniRef100_A0A8I0W8V4,UniRef50_P60184,UniRef90_A0A657ZWH5 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 86644 87621 . + . GCA_005502385.1_01835_gene GCA_005502385.1_01835 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLVAINRNNETVYAHQAIITEEYRCPYCKEKLLLKKGLKKIPHFAHVSQTKRRCMKNETEKHYYVKFFIAQRLKQYHFNVEIEPYFSEIMQYPDILVNAKVAIEVQFSRISIKEVKSRSRGLEQIGVAVIWIIEQVQYHKGYLYLNTFQAYFINPIDRTLYSWEHEKQLIVKYVNIQHIGGRKFIAHRRMIQISELLSFNEQKNESYCYKLSNRHISRYIFNCRKKRSVLEPSLSAMYQLQITDDEVCRDTGYIFSYQIFIENHPVQWQLKLKLLLKHNLPKQYLMSYLKFRQFYLLDINKEEITLKLIDDYIQQISGSLNVQNK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 86644 87621 . + . GCA_005502385.1_01835_mRNA GCA_005502385.1_01835 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLVAINRNNETVYAHQAIITEEYRCPYCKEKLLLKKGLKKIPHFAHVSQTKRRCMKNETEKHYYVKFFIAQRLKQYHFNVEIEPYFSEIMQYPDILVNAKVAIEVQFSRISIKEVKSRSRGLEQIGVAVIWIIEQVQYHKGYLYLNTFQAYFINPIDRTLYSWEHEKQLIVKYVNIQHIGGRKFIAHRRMIQISELLSFNEQKNESYCYKLSNRHISRYIFNCRKKRSVLEPSLSAMYQLQITDDEVCRDTGYIFSYQIFIENHPVQWQLKLKLLLKHNLPKQYLMSYLKFRQFYLLDINKEEITLKLIDDYIQQISGSLNVQNK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 86644 87621 . + 0 GCA_005502385.1_01835 GCA_005502385.1_01835_gene,GCA_005502385.1_01835_mRNA GCA_005502385.1_01835 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLVAINRNNETVYAHQAIITEEYRCPYCKEKLLLKKGLKKIPHFAHVSQTKRRCMKNETEKHYYVKFFIAQRLKQYHFNVEIEPYFSEIMQYPDILVNAKVAIEVQFSRISIKEVKSRSRGLEQIGVAVIWIIEQVQYHKGYLYLNTFQAYFINPIDRTLYSWEHEKQLIVKYVNIQHIGGRKFIAHRRMIQISELLSFNEQKNESYCYKLSNRHISRYIFNCRKKRSVLEPSLSAMYQLQITDDEVCRDTGYIFSYQIFIENHPVQWQLKLKLLLKHNLPKQYLMSYLKFRQFYLLDINKEEITLKLIDDYIQQISGSLNVQNK persistent 325 Transcription factor WP_048682892.1 UPI0006606280 UniRef100_A0A8I0WAR0,UniRef50_A0A2A1K9P1,UniRef90_A0A6N0I3Q0 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 87667 89475 . + . GCA_005502385.1_01836_gene GCA_005502385.1_01836 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSQQLTREEQERKYPNETWDLTTIFESDEAFEKALKEVESYLGKEEQFKGHLGDSAKTLYNALALEDEIGTQLEKVYVYAHLKQDQDTSNDKYTGFESRAHQLIIKISSAWSFLVPEILQIDEEKLESFIKSNDDLKRYAFDLKLINEKRPHILDADKEKLLTQAQDALSTPENVYGMFSNADLEFKDAVDKDGKKHPLTQGTFIKYLESDDRKLRQSAYNNLYEAYGAYNNTLGSTLAGEVKKNIFNARAHNYKTARERALSNNHIPEEVYDNLVATVHKYLPLLHKYTQLRKELLGIDDLKMYDIYTPLVKDVKFEMPYDEAKEWMLKALEPMGKEYLDVVKEGLNHRWVDVYENKGKRSGGYSSGAHLTNPFILLNWSDTISDLYTLVHEFGHSAHSYFSRKNQPSNSSDYSIFVAEVASTCNEALLSDYMDKHLDDDRRLLLLNQELERFRATLFRQTMFAEFEHKIHQIEEAGEPLTSTRMNEEYAKLNRLYFGDVVETDDHISKEWSRIPHFYMNYYVYQYATGYSAAQSLSHQILTEGQPAVERYINEFLKKGSSNYPIEILKNAGVDMTTPEPIEQACEVFEQKLKAFEKLMKH . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 87667 89475 . + . GCA_005502385.1_01836_mRNA GCA_005502385.1_01836 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSQQLTREEQERKYPNETWDLTTIFESDEAFEKALKEVESYLGKEEQFKGHLGDSAKTLYNALALEDEIGTQLEKVYVYAHLKQDQDTSNDKYTGFESRAHQLIIKISSAWSFLVPEILQIDEEKLESFIKSNDDLKRYAFDLKLINEKRPHILDADKEKLLTQAQDALSTPENVYGMFSNADLEFKDAVDKDGKKHPLTQGTFIKYLESDDRKLRQSAYNNLYEAYGAYNNTLGSTLAGEVKKNIFNARAHNYKTARERALSNNHIPEEVYDNLVATVHKYLPLLHKYTQLRKELLGIDDLKMYDIYTPLVKDVKFEMPYDEAKEWMLKALEPMGKEYLDVVKEGLNHRWVDVYENKGKRSGGYSSGAHLTNPFILLNWSDTISDLYTLVHEFGHSAHSYFSRKNQPSNSSDYSIFVAEVASTCNEALLSDYMDKHLDDDRRLLLLNQELERFRATLFRQTMFAEFEHKIHQIEEAGEPLTSTRMNEEYAKLNRLYFGDVVETDDHISKEWSRIPHFYMNYYVYQYATGYSAAQSLSHQILTEGQPAVERYINEFLKKGSSNYPIEILKNAGVDMTTPEPIEQACEVFEQKLKAFEKLMKH . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 87667 89475 . + 0 GCA_005502385.1_01836 GCA_005502385.1_01836_gene,GCA_005502385.1_01836_mRNA GCA_005502385.1_01836 Oligoendopeptidase F%2C plasmid GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSQQLTREEQERKYPNETWDLTTIFESDEAFEKALKEVESYLGKEEQFKGHLGDSAKTLYNALALEDEIGTQLEKVYVYAHLKQDQDTSNDKYTGFESRAHQLIIKISSAWSFLVPEILQIDEEKLESFIKSNDDLKRYAFDLKLINEKRPHILDADKEKLLTQAQDALSTPENVYGMFSNADLEFKDAVDKDGKKHPLTQGTFIKYLESDDRKLRQSAYNNLYEAYGAYNNTLGSTLAGEVKKNIFNARAHNYKTARERALSNNHIPEEVYDNLVATVHKYLPLLHKYTQLRKELLGIDDLKMYDIYTPLVKDVKFEMPYDEAKEWMLKALEPMGKEYLDVVKEGLNHRWVDVYENKGKRSGGYSSGAHLTNPFILLNWSDTISDLYTLVHEFGHSAHSYFSRKNQPSNSSDYSIFVAEVASTCNEALLSDYMDKHLDDDRRLLLLNQELERFRATLFRQTMFAEFEHKIHQIEEAGEPLTSTRMNEEYAKLNRLYFGDVVETDDHISKEWSRIPHFYMNYYVYQYATGYSAAQSLSHQILTEGQPAVERYINEFLKKGSSNYPIEILKNAGVDMTTPEPIEQACEVFEQKLKAFEKLMKH persistent 602 pepF oligoendopeptidase F 3.4.24.- GO:0004222,GO:0006508 COG1164,E WP_048761211.1 UPI00066088FD UniRef100_A0A8I0WB59,UniRef50_O31605,UniRef90_A0A2A1K4B1 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 89575 89672 . + . GCA_005502385.1_01837_gene GCA_005502385.1_01837 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 89575 89672 . + . GCA_005502385.1_01837_mRNA GCA_005502385.1_01837 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 . . . . . . . GCA_005502385.1|SCOV01000006.1 Infernal:001001 misc_RNA 89575 89672 89.2 + . GCA_005502385.1_01837 GCA_005502385.1_01837_gene,GCA_005502385.1_01837_mRNA GCA_005502385.1_01837 RsaE GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 89743 90540 . - . GCA_005502385.1_01838_gene GCA_005502385.1_01838 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAEELKIVDNASRENTNLSPVNKIEIYSFFDPFNKDCFKLSAIISKLRIEYNQYIRIRHILNPSLKVLTKCQAQSTSDFDNIALAYKAAELQGRLRAERFIHLMQNEIIPKKDIITEEMICNCIKNAGLDYDVFKEDLQKNKLTESLKIDLHIAREMEIEQAPSLVFFSEDVHEEGLKVEGLYPYHIYTYIINELMGCPIEKELPPNLETYIQSKQLVTMEELLTIYEWPEKLLVKELKKLALQQKVEKLNYPDGEFWQSKMPKK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 89743 90540 . - . GCA_005502385.1_01838_mRNA GCA_005502385.1_01838 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAEELKIVDNASRENTNLSPVNKIEIYSFFDPFNKDCFKLSAIISKLRIEYNQYIRIRHILNPSLKVLTKCQAQSTSDFDNIALAYKAAELQGRLRAERFIHLMQNEIIPKKDIITEEMICNCIKNAGLDYDVFKEDLQKNKLTESLKIDLHIAREMEIEQAPSLVFFSEDVHEEGLKVEGLYPYHIYTYIINELMGCPIEKELPPNLETYIQSKQLVTMEELLTIYEWPEKLLVKELKKLALQQKVEKLNYPDGEFWQSKMPKK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 89743 90540 . - 0 GCA_005502385.1_01838 GCA_005502385.1_01838_gene,GCA_005502385.1_01838_mRNA GCA_005502385.1_01838 hypothetical protein UPF0413 protein SA0860 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAEELKIVDNASRENTNLSPVNKIEIYSFFDPFNKDCFKLSAIISKLRIEYNQYIRIRHILNPSLKVLTKCQAQSTSDFDNIALAYKAAELQGRLRAERFIHLMQNEIIPKKDIITEEMICNCIKNAGLDYDVFKEDLQKNKLTESLKIDLHIAREMEIEQAPSLVFFSEDVHEEGLKVEGLYPYHIYTYIINELMGCPIEKELPPNLETYIQSKQLVTMEELLTIYEWPEKLLVKELKKLALQQKVEKLNYPDGEFWQSKMPKK persistent 265 yjbH protease adaptor protein YjbH GO:0005737 COG2761,O WP_048761214.1 UPI000660F258 UniRef100_UPI000660F258,UniRef50_Q2G203,UniRef90_Q4L510 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 90564 91004 . - . GCA_005502385.1_01839_gene GCA_005502385.1_01839 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKSQITFKCKNSCYIRNILIEIGDTMATTPYDVIGEKALYDMIDYFYFLVENDQRINHLFPGDFKETSRKQKQFLTQFLGGPDLYTQEHGHPMLKKRHMEFRITTYERDAWLENMYKAINKAQFPAGVGEYLYERLRLTANHMVNS . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 90564 91004 . - . GCA_005502385.1_01839_mRNA GCA_005502385.1_01839 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKSQITFKCKNSCYIRNILIEIGDTMATTPYDVIGEKALYDMIDYFYFLVENDQRINHLFPGDFKETSRKQKQFLTQFLGGPDLYTQEHGHPMLKKRHMEFRITTYERDAWLENMYKAINKAQFPAGVGEYLYERLRLTANHMVNS . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 90564 91004 . - 0 GCA_005502385.1_01839 GCA_005502385.1_01839_gene,GCA_005502385.1_01839_mRNA GCA_005502385.1_01839 Group 2 truncated hemoglobin YjbI GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKSQITFKCKNSCYIRNILIEIGDTMATTPYDVIGEKALYDMIDYFYFLVENDQRINHLFPGDFKETSRKQKQFLTQFLGGPDLYTQEHGHPMLKKRHMEFRITTYERDAWLENMYKAINKAQFPAGVGEYLYERLRLTANHMVNS persistent 146 Globin UniRef50_Q2G202 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 91020 91598 . - . GCA_005502385.1_01840_gene GCA_005502385.1_01840 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSTNNEIEFKQLIDFNTYNAIKDSYFKQLTPFTQTNYYIESPSFKLRDHRSALRIRVKQNTFEITLKVPAKVGLIEYNHPIDIKPHIGQTIVKSTLPNDIQKILTEFDIEENELSVLGALTTERLEVEFQNELLVLDKSQYFDKTDYELEFEVNDYQIGFEKFQNLLKQFDLVHEPPKNKVQRFFEYQAQLG . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 91020 91598 . - . GCA_005502385.1_01840_mRNA GCA_005502385.1_01840 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSTNNEIEFKQLIDFNTYNAIKDSYFKQLTPFTQTNYYIESPSFKLRDHRSALRIRVKQNTFEITLKVPAKVGLIEYNHPIDIKPHIGQTIVKSTLPNDIQKILTEFDIEENELSVLGALTTERLEVEFQNELLVLDKSQYFDKTDYELEFEVNDYQIGFEKFQNLLKQFDLVHEPPKNKVQRFFEYQAQLG . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 91020 91598 . - 0 GCA_005502385.1_01840 GCA_005502385.1_01840_gene,GCA_005502385.1_01840_mRNA GCA_005502385.1_01840 Putative triphosphatase YjbK GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSTNNEIEFKQLIDFNTYNAIKDSYFKQLTPFTQTNYYIESPSFKLRDHRSALRIRVKQNTFEITLKVPAKVGLIEYNHPIDIKPHIGQTIVKSTLPNDIQKILTEFDIEENELSVLGALTTERLEVEFQNELLVLDKSQYFDKTDYELEFEVNDYQIGFEKFQNLLKQFDLVHEPPKNKVQRFFEYQAQLG persistent 192 CYTH domain-containing protein WP_048761217.1 UPI00065FE938 UniRef100_A0A3S7GXW0,UniRef50_Q2G201,UniRef90_A0A657ZUE7 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 91808 92155 . + . GCA_005502385.1_01841_gene GCA_005502385.1_01841 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MRIYVNEIKIKDDSIYCYSEDPTDGLDEVGQMLVDSDNFSFAYLLDDGSSYSYLIFVQETWSMLHNNRDKKVIINDELELEHFQDELSYILENVEGNNNYGKEFVSAVEETFELK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 91808 92155 . + . GCA_005502385.1_01841_mRNA GCA_005502385.1_01841 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MRIYVNEIKIKDDSIYCYSEDPTDGLDEVGQMLVDSDNFSFAYLLDDGSSYSYLIFVQETWSMLHNNRDKKVIINDELELEHFQDELSYILENVEGNNNYGKEFVSAVEETFELK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 91808 92155 . + 0 GCA_005502385.1_01841 GCA_005502385.1_01841_gene,GCA_005502385.1_01841_mRNA GCA_005502385.1_01841 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MRIYVNEIKIKDDSIYCYSEDPTDGLDEVGQMLVDSDNFSFAYLLDDGSSYSYLIFVQETWSMLHNNRDKKVIINDELELEHFQDELSYILENVEGNNNYGKEFVSAVEETFELK persistent 115 UPF0738 protein FOB69_08315 WP_002448177.1 UPI00019FC791 UniRef100_A0A1L8Y6S3,UniRef50_Q2G200,UniRef90_A0A1L8Y6S3 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 92172 92801 . + . GCA_005502385.1_01842_gene GCA_005502385.1_01842 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNQWEQFLTPYKQAVDELKVKLKGLRKQYEVGDNASPIEFVTGRVKPITSIIDKANKRGIPFDRLREEMYDIAGLRMMCQFVDDIDVVVNMLRQRQDFKVVEERDYINNTKQSGYRSYHVIIEYPIETLSGQKMILAEIQIRTLAMNFWATIEHTLRYKYDGDYPAEIQHRLERAAEAAYLLDEEMSEIKEEIQEAQKYYTQKRAKKHD . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 92172 92801 . + . GCA_005502385.1_01842_mRNA GCA_005502385.1_01842 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNQWEQFLTPYKQAVDELKVKLKGLRKQYEVGDNASPIEFVTGRVKPITSIIDKANKRGIPFDRLREEMYDIAGLRMMCQFVDDIDVVVNMLRQRQDFKVVEERDYINNTKQSGYRSYHVIIEYPIETLSGQKMILAEIQIRTLAMNFWATIEHTLRYKYDGDYPAEIQHRLERAAEAAYLLDEEMSEIKEEIQEAQKYYTQKRAKKHD . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 92172 92801 . + 0 GCA_005502385.1_01842 GCA_005502385.1_01842_gene,GCA_005502385.1_01842_mRNA GCA_005502385.1_01842 GTP pyrophosphokinase YjbM GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNQWEQFLTPYKQAVDELKVKLKGLRKQYEVGDNASPIEFVTGRVKPITSIIDKANKRGIPFDRLREEMYDIAGLRMMCQFVDDIDVVVNMLRQRQDFKVVEERDYINNTKQSGYRSYHVIIEYPIETLSGQKMILAEIQIRTLAMNFWATIEHTLRYKYDGDYPAEIQHRLERAAEAAYLLDEEMSEIKEEIQEAQKYYTQKRAKKHD persistent 209 yjbM GTP pyrophosphokinase COG2357,FT WP_017175811.1 UPI0002FE05C2 UniRef100_A0A4Q9WP66,UniRef50_O31611,UniRef90_A0A380G3W5 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 92816 93622 . + . GCA_005502385.1_01843_gene GCA_005502385.1_01843 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MRYTILSKGDSKSNTLKHKMMNQMNSFHMMEDTENPEIVISVGGDGTLLQAFHQYSHMLSNVAFVGVHTGHLGFYADWLPHEVEKLIDEIHHSEFQVIEYPLLEIIVKYNNTKNETRYLALNEATMKTENGSTLVADVAIRGKHFERFRGDGLCISTPSGSTAYNKALGGALIHPSLEAIQIAEIASINNRVFRTVGSPLVLPKHHTCLITPVNHNTIRTTIDHVSLKHKNVSDIQFRVANEKVRFARFRPFPFWKRVHDSFIESEDD . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 92816 93622 . + . GCA_005502385.1_01843_mRNA GCA_005502385.1_01843 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MRYTILSKGDSKSNTLKHKMMNQMNSFHMMEDTENPEIVISVGGDGTLLQAFHQYSHMLSNVAFVGVHTGHLGFYADWLPHEVEKLIDEIHHSEFQVIEYPLLEIIVKYNNTKNETRYLALNEATMKTENGSTLVADVAIRGKHFERFRGDGLCISTPSGSTAYNKALGGALIHPSLEAIQIAEIASINNRVFRTVGSPLVLPKHHTCLITPVNHNTIRTTIDHVSLKHKNVSDIQFRVANEKVRFARFRPFPFWKRVHDSFIESEDD . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 92816 93622 . + 0 GCA_005502385.1_01843 GCA_005502385.1_01843_gene,GCA_005502385.1_01843_mRNA GCA_005502385.1_01843 NAD kinase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MRYTILSKGDSKSNTLKHKMMNQMNSFHMMEDTENPEIVISVGGDGTLLQAFHQYSHMLSNVAFVGVHTGHLGFYADWLPHEVEKLIDEIHHSEFQVIEYPLLEIIVKYNNTKNETRYLALNEATMKTENGSTLVADVAIRGKHFERFRGDGLCISTPSGSTAYNKALGGALIHPSLEAIQIAEIASINNRVFRTVGSPLVLPKHHTCLITPVNHNTIRTTIDHVSLKHKNVSDIQFRVANEKVRFARFRPFPFWKRVHDSFIESEDD persistent 268 NAD kinase 2.7.1.23 GO:0003951,GO:0006741 WP_019835656.1 UPI000380C8B3 UniRef100_UPI000380C8B3,UniRef50_Q8Y8D7,UniRef90_A0A3S7GTM3 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 93622 94488 . + . GCA_005502385.1_01844_gene GCA_005502385.1_01844 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKFVYHIHSEEMLKTFLQRHNYSKKTISAIKRDGALIINRQPVTVRYMLKKDDQLIVKLPEEVPSTYLRPSNKHIEILYEDTYLIIVSKPVHLNCAPSREHPHDSLIERVMYYLNHSTNKVQYVVPHIVTRLDRNTTGIVIFTKHGHIHHLMSTFEIDKRYICVCYGKTKEQSMIEAPIGRNKDSIITRCITPSGKHAKTEYKTLSSHHSASLCEVKLHTGRTHQIRVHFKHIGHPLIGDDLYDGFHPRIQTQSLQCYKVKFRHPIYNKEIEIILDYKNLEKIYQSVN . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 93622 94488 . + . GCA_005502385.1_01844_mRNA GCA_005502385.1_01844 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKFVYHIHSEEMLKTFLQRHNYSKKTISAIKRDGALIINRQPVTVRYMLKKDDQLIVKLPEEVPSTYLRPSNKHIEILYEDTYLIIVSKPVHLNCAPSREHPHDSLIERVMYYLNHSTNKVQYVVPHIVTRLDRNTTGIVIFTKHGHIHHLMSTFEIDKRYICVCYGKTKEQSMIEAPIGRNKDSIITRCITPSGKHAKTEYKTLSSHHSASLCEVKLHTGRTHQIRVHFKHIGHPLIGDDLYDGFHPRIQTQSLQCYKVKFRHPIYNKEIEIILDYKNLEKIYQSVN . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 93622 94488 . + 0 GCA_005502385.1_01844 GCA_005502385.1_01844_gene,GCA_005502385.1_01844_mRNA GCA_005502385.1_01844 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKFVYHIHSEEMLKTFLQRHNYSKKTISAIKRDGALIINRQPVTVRYMLKKDDQLIVKLPEEVPSTYLRPSNKHIEILYEDTYLIIVSKPVHLNCAPSREHPHDSLIERVMYYLNHSTNKVQYVVPHIVTRLDRNTTGIVIFTKHGHIHHLMSTFEIDKRYICVCYGKTKEQSMIEAPIGRNKDSIITRCITPSGKHAKTEYKTLSSHHSASLCEVKLHTGRTHQIRVHFKHIGHPLIGDDLYDGFHPRIQTQSLQCYKVKFRHPIYNKEIEIILDYKNLEKIYQSVN persistent 288 RNA pseudouridine synthase WP_019835655.1 UPI00037326ED UniRef100_UPI00037326ED,UniRef50_A0A380CJ34,UniRef90_A0A3S7GTJ3 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 94507 95892 . + . GCA_005502385.1_01845_gene GCA_005502385.1_01845 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSLNTETTDIQHNKVYNQKLLDDSLNRNDIDQFRKEFLTIHQYEQSEYFENTTNQNRQRIFEFLSPQEVSRFFNQLDIEGKEYEILFDSMHAHYASEVLENMSTDNAVDILNELSNSKVASLLALMDNRVTDKIKKLLHYEEDTAGGIMTTEYISLDIGTSVKEALMLVKSQAPDAETIYVIYVVDTAGQLVGVLSLKDLIVANIDAHVEEVMIRRVVSVNVEEDQERVAQKMKDYDFIAMPVIDYQHHLVGIITIDDILDVVNEEADEDYSRLAGVSDTKSTDQSVFKKALKRLPWLIILTFLGMITATILGGFEDTLSQVALLAAFIPIISGMSGNSGTQSLAVSVRNISNGDIKEKSKLKIALKEAGSGLITGFVCAVILFLIIVIIYRQPFLALIVGASLTIAMTVGTLVGSMIPILMNKIHIDPAVASGPFITTINDIVSMLIYFGLATTFMSYLT . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 94507 95892 . + . GCA_005502385.1_01845_mRNA GCA_005502385.1_01845 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSLNTETTDIQHNKVYNQKLLDDSLNRNDIDQFRKEFLTIHQYEQSEYFENTTNQNRQRIFEFLSPQEVSRFFNQLDIEGKEYEILFDSMHAHYASEVLENMSTDNAVDILNELSNSKVASLLALMDNRVTDKIKKLLHYEEDTAGGIMTTEYISLDIGTSVKEALMLVKSQAPDAETIYVIYVVDTAGQLVGVLSLKDLIVANIDAHVEEVMIRRVVSVNVEEDQERVAQKMKDYDFIAMPVIDYQHHLVGIITIDDILDVVNEEADEDYSRLAGVSDTKSTDQSVFKKALKRLPWLIILTFLGMITATILGGFEDTLSQVALLAAFIPIISGMSGNSGTQSLAVSVRNISNGDIKEKSKLKIALKEAGSGLITGFVCAVILFLIIVIIYRQPFLALIVGASLTIAMTVGTLVGSMIPILMNKIHIDPAVASGPFITTINDIVSMLIYFGLATTFMSYLT . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 94507 95892 . + 0 GCA_005502385.1_01845 GCA_005502385.1_01845_gene,GCA_005502385.1_01845_mRNA GCA_005502385.1_01845 Magnesium transporter MgtE GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSLNTETTDIQHNKVYNQKLLDDSLNRNDIDQFRKEFLTIHQYEQSEYFENTTNQNRQRIFEFLSPQEVSRFFNQLDIEGKEYEILFDSMHAHYASEVLENMSTDNAVDILNELSNSKVASLLALMDNRVTDKIKKLLHYEEDTAGGIMTTEYISLDIGTSVKEALMLVKSQAPDAETIYVIYVVDTAGQLVGVLSLKDLIVANIDAHVEEVMIRRVVSVNVEEDQERVAQKMKDYDFIAMPVIDYQHHLVGIITIDDILDVVNEEADEDYSRLAGVSDTKSTDQSVFKKALKRLPWLIILTFLGMITATILGGFEDTLSQVALLAAFIPIISGMSGNSGTQSLAVSVRNISNGDIKEKSKLKIALKEAGSGLITGFVCAVILFLIIVIIYRQPFLALIVGASLTIAMTVGTLVGSMIPILMNKIHIDPAVASGPFITTINDIVSMLIYFGLATTFMSYLT persistent 461 mgtE magnesium transporter GO:0015095,GO:0015693,GO:0016020 WP_019835654.1 UPI00037752A1 UniRef100_UPI00037752A1,UniRef50_A0A2T4SE99,UniRef90_A0A3S7GTN0 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 95902 97746 . + . GCA_005502385.1_01846_gene GCA_005502385.1_01846 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MEFFSLVIVVVAAFLTPIIVNRLNVTFLPVVVAEILMGIIIGNSFLGLVHKDEMLNILSTLGFIFLMFLSGLEIDFSAFKKDTRKRQGIDKNEKNLPSHLQLALTVFSLIMVLSIILAFAFKWLGFVDDVLLMVIIISTISLGVVVPTLKEMNIMRTTIGQFILLVAVLADLFTMVLLTIYGGINGEGGGSIWLSAILIVFTAIFYLLGSVFKRLNFMQRLMGGTTQIGIRAIFALIILLVALAEGVGAEYILGAFLAGVVVSLLKPDEEIIHTLDSFGYGFFIPIFFIMVGVDLDIPSLIKEPSLLIIIPILILSFIVSKLIPVLFIRRWFDTKTTIASAFLLTSTLSLVIAAAKIAEELKAITSEMSGILILSAIITCVFVPVVFKKLFPIPDEVNRKIDIALIGKNQLTIPIVQNLTSQLYNITLFYRKDLGDQRNLPDNVTVIEISEYEESLLERLGLFNQDIVVCSANDDGLNKMIAKLAKSHGVNRVICRLENSGDDEELKTDGIEVFSNFISNKIFLKGLIETPNMLNILSNVETSLYEIEMLNYKYENILLRNFPFGGDIIFVRIVRNNESIVPHGDTQLRYKDRLIVTGSKEYVDELKSELEFYY . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 95902 97746 . + . GCA_005502385.1_01846_mRNA GCA_005502385.1_01846 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MEFFSLVIVVVAAFLTPIIVNRLNVTFLPVVVAEILMGIIIGNSFLGLVHKDEMLNILSTLGFIFLMFLSGLEIDFSAFKKDTRKRQGIDKNEKNLPSHLQLALTVFSLIMVLSIILAFAFKWLGFVDDVLLMVIIISTISLGVVVPTLKEMNIMRTTIGQFILLVAVLADLFTMVLLTIYGGINGEGGGSIWLSAILIVFTAIFYLLGSVFKRLNFMQRLMGGTTQIGIRAIFALIILLVALAEGVGAEYILGAFLAGVVVSLLKPDEEIIHTLDSFGYGFFIPIFFIMVGVDLDIPSLIKEPSLLIIIPILILSFIVSKLIPVLFIRRWFDTKTTIASAFLLTSTLSLVIAAAKIAEELKAITSEMSGILILSAIITCVFVPVVFKKLFPIPDEVNRKIDIALIGKNQLTIPIVQNLTSQLYNITLFYRKDLGDQRNLPDNVTVIEISEYEESLLERLGLFNQDIVVCSANDDGLNKMIAKLAKSHGVNRVICRLENSGDDEELKTDGIEVFSNFISNKIFLKGLIETPNMLNILSNVETSLYEIEMLNYKYENILLRNFPFGGDIIFVRIVRNNESIVPHGDTQLRYKDRLIVTGSKEYVDELKSELEFYY . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 95902 97746 . + 0 GCA_005502385.1_01846 GCA_005502385.1_01846_gene,GCA_005502385.1_01846_mRNA GCA_005502385.1_01846 Glutathione-regulated potassium-efflux system protein KefB GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MEFFSLVIVVVAAFLTPIIVNRLNVTFLPVVVAEILMGIIIGNSFLGLVHKDEMLNILSTLGFIFLMFLSGLEIDFSAFKKDTRKRQGIDKNEKNLPSHLQLALTVFSLIMVLSIILAFAFKWLGFVDDVLLMVIIISTISLGVVVPTLKEMNIMRTTIGQFILLVAVLADLFTMVLLTIYGGINGEGGGSIWLSAILIVFTAIFYLLGSVFKRLNFMQRLMGGTTQIGIRAIFALIILLVALAEGVGAEYILGAFLAGVVVSLLKPDEEIIHTLDSFGYGFFIPIFFIMVGVDLDIPSLIKEPSLLIIIPILILSFIVSKLIPVLFIRRWFDTKTTIASAFLLTSTLSLVIAAAKIAEELKAITSEMSGILILSAIITCVFVPVVFKKLFPIPDEVNRKIDIALIGKNQLTIPIVQNLTSQLYNITLFYRKDLGDQRNLPDNVTVIEISEYEESLLERLGLFNQDIVVCSANDDGLNKMIAKLAKSHGVNRVICRLENSGDDEELKTDGIEVFSNFISNKIFLKGLIETPNMLNILSNVETSLYEIEMLNYKYENILLRNFPFGGDIIFVRIVRNNESIVPHGDTQLRYKDRLIVTGSKEYVDELKSELEFYY persistent 614 Sodium:proton antiporter WP_019835653.1 UPI00038298E2 UniRef100_A0A3S7GTA5,UniRef50_O31615,UniRef90_A0A3S7GTA5 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 97952 98722 . + . GCA_005502385.1_01847_gene GCA_005502385.1_01847 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MINLENKTFVIMGIANKRSIGFGVAKVLDELGAHLVFTYRKERSKKELEKLLGQLNQKEHHLYQIDVQKDEDVINGFAKIGEEVGTIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKIMPNGGSIVATTYLGGEFAIQNYNVMGVAKASLEANVKYLAYDLGPDNIRVNAISAGPIRTLSAKGVGGLNLILKEVEERAPLRRNVDQEEVGRTAAYLLSDFSSGVTGENIHVDSGFHAIK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 97952 98722 . + . GCA_005502385.1_01847_mRNA GCA_005502385.1_01847 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MINLENKTFVIMGIANKRSIGFGVAKVLDELGAHLVFTYRKERSKKELEKLLGQLNQKEHHLYQIDVQKDEDVINGFAKIGEEVGTIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKIMPNGGSIVATTYLGGEFAIQNYNVMGVAKASLEANVKYLAYDLGPDNIRVNAISAGPIRTLSAKGVGGLNLILKEVEERAPLRRNVDQEEVGRTAAYLLSDFSSGVTGENIHVDSGFHAIK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 97952 98722 . + 0 GCA_005502385.1_01847 GCA_005502385.1_01847_gene,GCA_005502385.1_01847_mRNA GCA_005502385.1_01847 Enoyl-[acyl-carrier-protein] reductase [NADPH] FabI GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MINLENKTFVIMGIANKRSIGFGVAKVLDELGAHLVFTYRKERSKKELEKLLGQLNQKEHHLYQIDVQKDEDVINGFAKIGEEVGTIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKIMPNGGSIVATTYLGGEFAIQNYNVMGVAKASLEANVKYLAYDLGPDNIRVNAISAGPIRTLSAKGVGGLNLILKEVEERAPLRRNVDQEEVGRTAAYLLSDFSSGVTGENIHVDSGFHAIK persistent 256 fabI enoyl-ACP reductase FabI 1.3.1.- GO:0004318,GO:0006633 WP_019835652.1 UPI0003703952 UniRef100_A0A3S7GX41,UniRef50_P54616,UniRef90_A0A657ZUN9 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 99074 100159 . - . GCA_005502385.1_01848_gene GCA_005502385.1_01848 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLNKVWFRTGIFLIILFVLIKLFMEVHSVFTPIATIIGSVFLPFLLSGFLFYICLPFQTLLEKWGFPRWASILTIFIVLIAIIAIVVAFIAPIIISNVNNLIKATPTLQRDAEQVVNFSLNQMDKLPSDVTAKINSTMKSISDSLTGILANSITYITSLISTIFLLIMVPFFLIYMLKDHEKFIPAIGKFFKGERKVFVVDLLKDLNYTLKSYIQGQVTVSFILGIILYIGYTLIGLPYTPLLVLFAGVANLIPFLGPWLSFAPAAILGIIDGPSTFIWVCVVTLIAQQLEGNVITPNVMGKSLSIHPLTIIVVILAAGDLGGFTLILIAVPLYAVLKTVARNVFKYRQRIIDKANSDVKD . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 99074 100159 . - . GCA_005502385.1_01848_mRNA GCA_005502385.1_01848 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLNKVWFRTGIFLIILFVLIKLFMEVHSVFTPIATIIGSVFLPFLLSGFLFYICLPFQTLLEKWGFPRWASILTIFIVLIAIIAIVVAFIAPIIISNVNNLIKATPTLQRDAEQVVNFSLNQMDKLPSDVTAKINSTMKSISDSLTGILANSITYITSLISTIFLLIMVPFFLIYMLKDHEKFIPAIGKFFKGERKVFVVDLLKDLNYTLKSYIQGQVTVSFILGIILYIGYTLIGLPYTPLLVLFAGVANLIPFLGPWLSFAPAAILGIIDGPSTFIWVCVVTLIAQQLEGNVITPNVMGKSLSIHPLTIIVVILAAGDLGGFTLILIAVPLYAVLKTVARNVFKYRQRIIDKANSDVKD . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 99074 100159 . - 0 GCA_005502385.1_01848 GCA_005502385.1_01848_gene,GCA_005502385.1_01848_mRNA GCA_005502385.1_01848 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLNKVWFRTGIFLIILFVLIKLFMEVHSVFTPIATIIGSVFLPFLLSGFLFYICLPFQTLLEKWGFPRWASILTIFIVLIAIIAIVVAFIAPIIISNVNNLIKATPTLQRDAEQVVNFSLNQMDKLPSDVTAKINSTMKSISDSLTGILANSITYITSLISTIFLLIMVPFFLIYMLKDHEKFIPAIGKFFKGERKVFVVDLLKDLNYTLKSYIQGQVTVSFILGIILYIGYTLIGLPYTPLLVLFAGVANLIPFLGPWLSFAPAAILGIIDGPSTFIWVCVVTLIAQQLEGNVITPNVMGKSLSIHPLTIIVVILAAGDLGGFTLILIAVPLYAVLKTVARNVFKYRQRIIDKANSDVKD persistent 361 perM AI-2E family transporter COG0628,R WP_017175806.1 UPI00030ED0A5 UniRef100_A0A4Q9WRC7,UniRef50_Q2FZQ2,UniRef90_A0AAE5JM71 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 100430 101176 . + . GCA_005502385.1_01849_gene GCA_005502385.1_01849 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MGEFKAGKINKYILSSDILERDITLSIYLPEDFTELFKSQVIICFDGLDFFRFGRIQREYERLRKEEHIERAIIVGFHYEDVEKRREEFHPQGSRSQKTIQSVVKELLPFIDQTFPTYKVGNSRLLIGDSLAGSIAFLTSLTYPSIFSQIAMFSPHSDHTVLEKFETCKQRNRLTIWHAIGKDEVDFKLPTTGEQADFLTPNRKLANLIEQDERVTYVYNEFNGSHNWKSWKPMLGDILYYFLNNSTY . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 100430 101176 . + . GCA_005502385.1_01849_mRNA GCA_005502385.1_01849 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MGEFKAGKINKYILSSDILERDITLSIYLPEDFTELFKSQVIICFDGLDFFRFGRIQREYERLRKEEHIERAIIVGFHYEDVEKRREEFHPQGSRSQKTIQSVVKELLPFIDQTFPTYKVGNSRLLIGDSLAGSIAFLTSLTYPSIFSQIAMFSPHSDHTVLEKFETCKQRNRLTIWHAIGKDEVDFKLPTTGEQADFLTPNRKLANLIEQDERVTYVYNEFNGSHNWKSWKPMLGDILYYFLNNSTY . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 100430 101176 . + 0 GCA_005502385.1_01849 GCA_005502385.1_01849_gene,GCA_005502385.1_01849_mRNA GCA_005502385.1_01849 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MGEFKAGKINKYILSSDILERDITLSIYLPEDFTELFKSQVIICFDGLDFFRFGRIQREYERLRKEEHIERAIIVGFHYEDVEKRREEFHPQGSRSQKTIQSVVKELLPFIDQTFPTYKVGNSRLLIGDSLAGSIAFLTSLTYPSIFSQIAMFSPHSDHTVLEKFETCKQRNRLTIWHAIGKDEVDFKLPTTGEQADFLTPNRKLANLIEQDERVTYVYNEFNGSHNWKSWKPMLGDILYYFLNNSTY persistent 248 Alpha/beta hydrolase-fold protein WP_049382307.1 UPI00066D188A UniRef100_UPI00066D188A,UniRef50_Q2FZQ0,UniRef90_A0A4Q9WPA8 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 101286 101795 . + . GCA_005502385.1_01850_gene GCA_005502385.1_01850 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKIGLALIPSQSFQNEVDGYRKRYDTEYARIMPHITIKPHFELKETELDSFKDEVKQTLDGFKPVEVHVTKASSFKPTNNVIYFKVEKTEELENLFNTFNTESFYGKAEHPFVPHFTIAQGLTSQEFEDIFGQVKLAGVDHRETIDELSLLHYNEDEDRWNIVDSFKLA . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 101286 101795 . + . GCA_005502385.1_01850_mRNA GCA_005502385.1_01850 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKIGLALIPSQSFQNEVDGYRKRYDTEYARIMPHITIKPHFELKETELDSFKDEVKQTLDGFKPVEVHVTKASSFKPTNNVIYFKVEKTEELENLFNTFNTESFYGKAEHPFVPHFTIAQGLTSQEFEDIFGQVKLAGVDHRETIDELSLLHYNEDEDRWNIVDSFKLA . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 101286 101795 . + 0 GCA_005502385.1_01850 GCA_005502385.1_01850_gene,GCA_005502385.1_01850_mRNA GCA_005502385.1_01850 Putative phosphoesterase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKIGLALIPSQSFQNEVDGYRKRYDTEYARIMPHITIKPHFELKETELDSFKDEVKQTLDGFKPVEVHVTKASSFKPTNNVIYFKVEKTEELENLFNTFNTESFYGKAEHPFVPHFTIAQGLTSQEFEDIFGQVKLAGVDHRETIDELSLLHYNEDEDRWNIVDSFKLA persistent 169 Putative phosphoesterase J7T32_003335 WP_017175804.1 UPI0002E4BFAD UniRef100_A0A4Q9WQ67,UniRef50_Q2FZP9,UniRef90_A0A4Q9WQ67 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 101845 103041 . - . GCA_005502385.1_01851_gene GCA_005502385.1_01851 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MPSSLSNNKSISKNFKIMLVILFLMEFARGMYVLSYVNYLPTVTSIAVAVTSVALSIHFISDAATNFVIGFLLKKFGTKIVLNLGFLLAFLSLFLIIFFPANPIIIIISAIMLGIAVSPIWVIMLSSVEESQRGKQMGYVYFSWLLGLLVGWAFMNVLVKIHPTRFAFAMSLVVIIAWILYYFVDVKLTNYNTKPVKEQLGQIVEVMKRHMILFPGILLQGASISALLPILPTYATKVVGVTTIEYTAAIAIGGIGCAISMLFLSKMIDKNSTGFMYTVIFVGFILFTLFIFGLSLVNNIIVVWIVAAFIGLMYGILLPAWNTFMAGHIDPSEQEETWGVFNSVQGFGSMIGPLFGGLIAQFSNGLNNTFYVSALIFLLLAIFYGIYFIKSRKHQKYS . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 101845 103041 . - . GCA_005502385.1_01851_mRNA GCA_005502385.1_01851 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MPSSLSNNKSISKNFKIMLVILFLMEFARGMYVLSYVNYLPTVTSIAVAVTSVALSIHFISDAATNFVIGFLLKKFGTKIVLNLGFLLAFLSLFLIIFFPANPIIIIISAIMLGIAVSPIWVIMLSSVEESQRGKQMGYVYFSWLLGLLVGWAFMNVLVKIHPTRFAFAMSLVVIIAWILYYFVDVKLTNYNTKPVKEQLGQIVEVMKRHMILFPGILLQGASISALLPILPTYATKVVGVTTIEYTAAIAIGGIGCAISMLFLSKMIDKNSTGFMYTVIFVGFILFTLFIFGLSLVNNIIVVWIVAAFIGLMYGILLPAWNTFMAGHIDPSEQEETWGVFNSVQGFGSMIGPLFGGLIAQFSNGLNNTFYVSALIFLLLAIFYGIYFIKSRKHQKYS . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 101845 103041 . - 0 GCA_005502385.1_01851 GCA_005502385.1_01851_gene,GCA_005502385.1_01851_mRNA GCA_005502385.1_01851 putative glycolipid permease LtaA GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MPSSLSNNKSISKNFKIMLVILFLMEFARGMYVLSYVNYLPTVTSIAVAVTSVALSIHFISDAATNFVIGFLLKKFGTKIVLNLGFLLAFLSLFLIIFFPANPIIIIISAIMLGIAVSPIWVIMLSSVEESQRGKQMGYVYFSWLLGLLVGWAFMNVLVKIHPTRFAFAMSLVVIIAWILYYFVDVKLTNYNTKPVKEQLGQIVEVMKRHMILFPGILLQGASISALLPILPTYATKVVGVTTIEYTAAIAIGGIGCAISMLFLSKMIDKNSTGFMYTVIFVGFILFTLFIFGLSLVNNIIVVWIVAAFIGLMYGILLPAWNTFMAGHIDPSEQEETWGVFNSVQGFGSMIGPLFGGLIAQFSNGLNNTFYVSALIFLLLAIFYGIYFIKSRKHQKYS persistent 398 ltaA lipoteichoic acid biosynthesis MFS flippase LtaA GO:0070395,GO:0140327 WP_049379561.1 UPI00066C98DB UniRef100_UPI00066C98DB,UniRef50_Q2FZP8,UniRef90_A0A3S7GWF2 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 103016 104194 . - . GCA_005502385.1_01852_gene GCA_005502385.1_01852 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MVTQNKKILIITGSFGNGHLQVTQSIVNQLNNMNLSHISVIEHDLFMEAHPILTSICKKWYINSFKYFRNMYKNFYYSRPDELDKCFYKYYGLNKLINLLLKEKPDLILMTFPTPVMSVLTEQFNMRIPIATVMTDYRLQKNWITPNSHRYYVATEDTKEDFVNVGIPASLIKVTGIPISDKFEADIDQQAWLKKYHLDPKKTTILMSAGAFGVSKGFEHMIERILEKSPHSQVVMVCGRSKGLKRNLEARFKSYDNVLILGYTKHMNEWMASSQLMITKPGGITISEGLTRSIPMIFLNPAPGQELENAYYFQEKGYGRIADTPEDAIDIVSELTHDSNKLTLMINTMRQDRVDYSTHRLCIDLLNMLDHSSQQQEIYGKVPLYAKFFVKQ . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 103016 104194 . - . GCA_005502385.1_01852_mRNA GCA_005502385.1_01852 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MVTQNKKILIITGSFGNGHLQVTQSIVNQLNNMNLSHISVIEHDLFMEAHPILTSICKKWYINSFKYFRNMYKNFYYSRPDELDKCFYKYYGLNKLINLLLKEKPDLILMTFPTPVMSVLTEQFNMRIPIATVMTDYRLQKNWITPNSHRYYVATEDTKEDFVNVGIPASLIKVTGIPISDKFEADIDQQAWLKKYHLDPKKTTILMSAGAFGVSKGFEHMIERILEKSPHSQVVMVCGRSKGLKRNLEARFKSYDNVLILGYTKHMNEWMASSQLMITKPGGITISEGLTRSIPMIFLNPAPGQELENAYYFQEKGYGRIADTPEDAIDIVSELTHDSNKLTLMINTMRQDRVDYSTHRLCIDLLNMLDHSSQQQEIYGKVPLYAKFFVKQ . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 103016 104194 . - 0 GCA_005502385.1_01852 GCA_005502385.1_01852_gene,GCA_005502385.1_01852_mRNA GCA_005502385.1_01852 Processive diacylglycerol beta-glucosyltransferase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MVTQNKKILIITGSFGNGHLQVTQSIVNQLNNMNLSHISVIEHDLFMEAHPILTSICKKWYINSFKYFRNMYKNFYYSRPDELDKCFYKYYGLNKLINLLLKEKPDLILMTFPTPVMSVLTEQFNMRIPIATVMTDYRLQKNWITPNSHRYYVATEDTKEDFVNVGIPASLIKVTGIPISDKFEADIDQQAWLKKYHLDPKKTTILMSAGAFGVSKGFEHMIERILEKSPHSQVVMVCGRSKGLKRNLEARFKSYDNVLILGYTKHMNEWMASSQLMITKPGGITISEGLTRSIPMIFLNPAPGQELENAYYFQEKGYGRIADTPEDAIDIVSELTHDSNKLTLMINTMRQDRVDYSTHRLCIDLLNMLDHSSQQQEIYGKVPLYAKFFVKQ persistent 392 diglucosyl diacylglycerol synthase WP_137689642.1 UPI0010F9D051 UniRef100_UPI0010F9D051,UniRef50_Q2FZP7,UniRef90_A0A4Q9WQG8 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 104575 106059 . + . GCA_005502385.1_01853_gene GCA_005502385.1_01853 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNANELFNKIRVKQVIGTLDIDITDITTDSRTASGESIFVASKGYTVDSHRFCQNVIDQGTKIIVVNRKQEVKGEVTQVIVPDTLRVASILAHTLFDYPSQQLTTFGVTGTNGKTSIATMIHLIYRGLDKNSAYLGTNGFQINEEKTKGANTTPETVLLTKKIKQAVDSKAEAMTMEVSSHGLALGRLRGVEFDVAIFSNLTQDHLDFHGTMEAYGHAKSLLFSQLGEDLSKEKYVVLNNDDDFSKYLETVTPFEILTYGIDNEAQFMPQNIKESLQGVQFDFATPFGTYHVSSPYVGKFNISNLMAAMIAVWSKGVDFKDIVEVVKSLEPVEGRLEVLDPSLPIDLIIDYAHTADGMNKLIDAVQPFVKQKLIFLVGMAGERDLTKTPEMGAVACRADYVIFTPDNPADDDPKMLTAELAKGATHNNYVEFEDRAEGIKHAIEVANPGDTVVLASKGREPYQIMPGHVKVPHRDDLIGLEAAYKKFGKSHYDH . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 104575 106059 . + . GCA_005502385.1_01853_mRNA GCA_005502385.1_01853 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNANELFNKIRVKQVIGTLDIDITDITTDSRTASGESIFVASKGYTVDSHRFCQNVIDQGTKIIVVNRKQEVKGEVTQVIVPDTLRVASILAHTLFDYPSQQLTTFGVTGTNGKTSIATMIHLIYRGLDKNSAYLGTNGFQINEEKTKGANTTPETVLLTKKIKQAVDSKAEAMTMEVSSHGLALGRLRGVEFDVAIFSNLTQDHLDFHGTMEAYGHAKSLLFSQLGEDLSKEKYVVLNNDDDFSKYLETVTPFEILTYGIDNEAQFMPQNIKESLQGVQFDFATPFGTYHVSSPYVGKFNISNLMAAMIAVWSKGVDFKDIVEVVKSLEPVEGRLEVLDPSLPIDLIIDYAHTADGMNKLIDAVQPFVKQKLIFLVGMAGERDLTKTPEMGAVACRADYVIFTPDNPADDDPKMLTAELAKGATHNNYVEFEDRAEGIKHAIEVANPGDTVVLASKGREPYQIMPGHVKVPHRDDLIGLEAAYKKFGKSHYDH . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 104575 106059 . + 0 GCA_005502385.1_01853 GCA_005502385.1_01853_gene,GCA_005502385.1_01853_mRNA GCA_005502385.1_01853 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNANELFNKIRVKQVIGTLDIDITDITTDSRTASGESIFVASKGYTVDSHRFCQNVIDQGTKIIVVNRKQEVKGEVTQVIVPDTLRVASILAHTLFDYPSQQLTTFGVTGTNGKTSIATMIHLIYRGLDKNSAYLGTNGFQINEEKTKGANTTPETVLLTKKIKQAVDSKAEAMTMEVSSHGLALGRLRGVEFDVAIFSNLTQDHLDFHGTMEAYGHAKSLLFSQLGEDLSKEKYVVLNNDDDFSKYLETVTPFEILTYGIDNEAQFMPQNIKESLQGVQFDFATPFGTYHVSSPYVGKFNISNLMAAMIAVWSKGVDFKDIVEVVKSLEPVEGRLEVLDPSLPIDLIIDYAHTADGMNKLIDAVQPFVKQKLIFLVGMAGERDLTKTPEMGAVACRADYVIFTPDNPADDDPKMLTAELAKGATHNNYVEFEDRAEGIKHAIEVANPGDTVVLASKGREPYQIMPGHVKVPHRDDLIGLEAAYKKFGKSHYDH persistent 494 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase 6.3.2.13,6.3.2.7 WP_101804200.1 UPI000C7B2524 UniRef100_UPI000C7B2524,UniRef50_Q2FZP6,UniRef90_A0A3S7GTL2 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 106049 106306 . + . GCA_005502385.1_01854_gene GCA_005502385.1_01854 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIIKQLSEQNEIINVYLYKNVHHAYYMIAIPDMFWSVELNAQLNEQEINEELIMQLFTFKEESEALRIASQLSKWIIKDLKENNE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 106049 106306 . + . GCA_005502385.1_01854_mRNA GCA_005502385.1_01854 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIIKQLSEQNEIINVYLYKNVHHAYYMIAIPDMFWSVELNAQLNEQEINEELIMQLFTFKEESEALRIASQLSKWIIKDLKENNE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 106049 106306 . + 0 GCA_005502385.1_01854 GCA_005502385.1_01854_gene,GCA_005502385.1_01854_mRNA GCA_005502385.1_01854 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIIKQLSEQNEIINVYLYKNVHHAYYMIAIPDMFWSVELNAQLNEQEINEELIMQLFTFKEESEALRIASQLSKWIIKDLKENNE persistent 85 YueH-like family protein WP_048682474.1 UPI00066015F3 UniRef100_UPI00066015F3,UniRef50_A0A533IVQ3,UniRef90_A0A533IVQ3 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 106303 107865 . + . GCA_005502385.1_01855_gene GCA_005502385.1_01855 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSLKEEIESRKTFAIISHPDAGKTTLTEKLLYFSGAIREAGTVKGKKTGKFATSDWMKVEQERGISVTSSVMQFDYDDYKINILDTPGHEDFSEDTYRTLMAVDSAVMVIDCAKGIEPQTLKLFKVCKMRGIPIFTFINKLDRVGKEPFELLEEIEETLNIDTYPMNWPIGMGQNFFGIIDRETKTIEPFRDEENVLHLNDEYELKEEHTISNDSAFEQAIEEFMLVEEAGEKFDNEALLNGDLTPVFFGSALANFGVQNFLNAYVDYAPMPNARQTNEEVEVSPFDDEFSGFIFKIQANMDPKHRDRIAFMRVVSGAFERGMDVTLQRTNKKQKITRSTSFMADDKETVNHAVAGDIIGLYDTGNYQIGDTLVGGKQKFNFQDLPQFTPEIFMKVSAKNVMKQKHFHKGIEQLVQEGAIQYYKTLHTNQIILGAVGQLQFEVFEHRMKNEYNVDVVMEPVGRKIARWIENEEDIQDKMNTSRSILVKDRYDKFVFLFVNEFATRWFEEKFPDIKLYSLL . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 106303 107865 . + . GCA_005502385.1_01855_mRNA GCA_005502385.1_01855 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSLKEEIESRKTFAIISHPDAGKTTLTEKLLYFSGAIREAGTVKGKKTGKFATSDWMKVEQERGISVTSSVMQFDYDDYKINILDTPGHEDFSEDTYRTLMAVDSAVMVIDCAKGIEPQTLKLFKVCKMRGIPIFTFINKLDRVGKEPFELLEEIEETLNIDTYPMNWPIGMGQNFFGIIDRETKTIEPFRDEENVLHLNDEYELKEEHTISNDSAFEQAIEEFMLVEEAGEKFDNEALLNGDLTPVFFGSALANFGVQNFLNAYVDYAPMPNARQTNEEVEVSPFDDEFSGFIFKIQANMDPKHRDRIAFMRVVSGAFERGMDVTLQRTNKKQKITRSTSFMADDKETVNHAVAGDIIGLYDTGNYQIGDTLVGGKQKFNFQDLPQFTPEIFMKVSAKNVMKQKHFHKGIEQLVQEGAIQYYKTLHTNQIILGAVGQLQFEVFEHRMKNEYNVDVVMEPVGRKIARWIENEEDIQDKMNTSRSILVKDRYDKFVFLFVNEFATRWFEEKFPDIKLYSLL . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 106303 107865 . + 0 GCA_005502385.1_01855 GCA_005502385.1_01855_gene,GCA_005502385.1_01855_mRNA GCA_005502385.1_01855 Peptide chain release factor 3 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSLKEEIESRKTFAIISHPDAGKTTLTEKLLYFSGAIREAGTVKGKKTGKFATSDWMKVEQERGISVTSSVMQFDYDDYKINILDTPGHEDFSEDTYRTLMAVDSAVMVIDCAKGIEPQTLKLFKVCKMRGIPIFTFINKLDRVGKEPFELLEEIEETLNIDTYPMNWPIGMGQNFFGIIDRETKTIEPFRDEENVLHLNDEYELKEEHTISNDSAFEQAIEEFMLVEEAGEKFDNEALLNGDLTPVFFGSALANFGVQNFLNAYVDYAPMPNARQTNEEVEVSPFDDEFSGFIFKIQANMDPKHRDRIAFMRVVSGAFERGMDVTLQRTNKKQKITRSTSFMADDKETVNHAVAGDIIGLYDTGNYQIGDTLVGGKQKFNFQDLPQFTPEIFMKVSAKNVMKQKHFHKGIEQLVQEGAIQYYKTLHTNQIILGAVGQLQFEVFEHRMKNEYNVDVVMEPVGRKIARWIENEEDIQDKMNTSRSILVKDRYDKFVFLFVNEFATRWFEEKFPDIKLYSLL persistent 520 peptide chain release factor 3 GO:0003924,GO:0006415 UniRef50_Q8Y8C0,UniRef90_A0AAP8PQE6 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 107987 108119 . + . GCA_005502385.1_01856_gene GCA_005502385.1_01856 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 107987 108119 . + . GCA_005502385.1_01856_mRNA GCA_005502385.1_01856 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 . . . . . . . GCA_005502385.1|SCOV01000006.1 Infernal:001001 misc_RNA 107987 108119 52.6 + . GCA_005502385.1_01856 GCA_005502385.1_01856_gene,GCA_005502385.1_01856_mRNA GCA_005502385.1_01856 yybP-ykoY GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 108176 108973 . + . GCA_005502385.1_01857_gene GCA_005502385.1_01857 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDPSLILPYLWVILVLVFLEGLLAADNAVVMAVMVKHLPPEQRKKALFYGLLGAFIFRFIALFLISIIVNFWFIQAIGAAYLIFMSIRNLWNFFHKKDEEEQVGDEHHYDETGAEKKVSAGKFWATVFKVEFADIAFAIDSMLAAMAIAVTLPKMGIHFGGMDLGQFGVMFIGGMIGVILMRFAATWFVDLLNKYPGLEGAAFAIVGWVGIKLVVIVLAHPDIGVLSEEFPHSTLWQAIFWTVMILLVVIGWLTSVRKNKKNAKH . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 108176 108973 . + . GCA_005502385.1_01857_mRNA GCA_005502385.1_01857 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDPSLILPYLWVILVLVFLEGLLAADNAVVMAVMVKHLPPEQRKKALFYGLLGAFIFRFIALFLISIIVNFWFIQAIGAAYLIFMSIRNLWNFFHKKDEEEQVGDEHHYDETGAEKKVSAGKFWATVFKVEFADIAFAIDSMLAAMAIAVTLPKMGIHFGGMDLGQFGVMFIGGMIGVILMRFAATWFVDLLNKYPGLEGAAFAIVGWVGIKLVVIVLAHPDIGVLSEEFPHSTLWQAIFWTVMILLVVIGWLTSVRKNKKNAKH . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 108176 108973 . + 0 GCA_005502385.1_01857 GCA_005502385.1_01857_gene,GCA_005502385.1_01857_mRNA GCA_005502385.1_01857 hypothetical protein """""" GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDPSLILPYLWVILVLVFLEGLLAADNAVVMAVMVKHLPPEQRKKALFYGLLGAFIFRFIALFLISIIVNFWFIQAIGAAYLIFMSIRNLWNFFHKKDEEEQVGDEHHYDETGAEKKVSAGKFWATVFKVEFADIAFAIDSMLAAMAIAVTLPKMGIHFGGMDLGQFGVMFIGGMIGVILMRFAATWFVDLLNKYPGLEGAAFAIVGWVGIKLVVIVLAHPDIGVLSEEFPHSTLWQAIFWTVMILLVVIGWLTSVRKNKKNAKH persistent 265 Toxic anion resistance protein WP_017175798.1 UPI0002FAEA4B UniRef100_A0A4V2KX30,UniRef50_O34997,UniRef90_A0A4Z1BDN1 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 109207 111066 . + . GCA_005502385.1_01858_gene GCA_005502385.1_01858 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDNDKKQVIPRSKYGRKRHEYFHNEEREERIERERQKREHLAEKEQHQAKVNEERVKDNLRKARIEKLTQEEIQQQQHLAKLRSKRDASNTAKKNNRHHLTLPEEQHLKQEDIHNEELKQQKPISSNGSKSENETNKSIEPTYSRLNKNNESRPKSKQEKDNQHNDTIKTQSKHPTITEESYTSTKDKESIHTEKEQVSTQQRSTQVEHTKSEQSKHISNSDKNTTENISDQQPHESYEQSANDTQNKIVDFLKEHWIKILIAIALILILVLVKAIFTEPSQEQHSNQTHTQDKKYTTTMKNANNTVRSVVTVESDAPKNTSVQKTNSKLDSELGSGVVYKTVGDTFFVLTNTHIVGEADKVKITYGENKSIKGDVVGKDKWSDIAVVKAKINDKNINSIHIGNSDKLVLGESILIVGNPLGEEFRNTVSKGIISGLNRLVPVDFDKDNKNDELMQTFQIDASVNPGNSGGAVVNKDGELIGIVSLKINMPSIEGMGFAIPINEAKSIAKELEKNGKVNYPNTGIALENVNDLNHYERSLLKLPNDINDGILVKKLKDDGLGKKSGLKIGDVIVKLEGKTLKDNLQYRHILFNHRQDLKTLTAKIYRDGNIQDIEINLK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 109207 111066 . + . GCA_005502385.1_01858_mRNA GCA_005502385.1_01858 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDNDKKQVIPRSKYGRKRHEYFHNEEREERIERERQKREHLAEKEQHQAKVNEERVKDNLRKARIEKLTQEEIQQQQHLAKLRSKRDASNTAKKNNRHHLTLPEEQHLKQEDIHNEELKQQKPISSNGSKSENETNKSIEPTYSRLNKNNESRPKSKQEKDNQHNDTIKTQSKHPTITEESYTSTKDKESIHTEKEQVSTQQRSTQVEHTKSEQSKHISNSDKNTTENISDQQPHESYEQSANDTQNKIVDFLKEHWIKILIAIALILILVLVKAIFTEPSQEQHSNQTHTQDKKYTTTMKNANNTVRSVVTVESDAPKNTSVQKTNSKLDSELGSGVVYKTVGDTFFVLTNTHIVGEADKVKITYGENKSIKGDVVGKDKWSDIAVVKAKINDKNINSIHIGNSDKLVLGESILIVGNPLGEEFRNTVSKGIISGLNRLVPVDFDKDNKNDELMQTFQIDASVNPGNSGGAVVNKDGELIGIVSLKINMPSIEGMGFAIPINEAKSIAKELEKNGKVNYPNTGIALENVNDLNHYERSLLKLPNDINDGILVKKLKDDGLGKKSGLKIGDVIVKLEGKTLKDNLQYRHILFNHRQDLKTLTAKIYRDGNIQDIEINLK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 109207 111066 . + 0 GCA_005502385.1_01858 GCA_005502385.1_01858_gene,GCA_005502385.1_01858_mRNA GCA_005502385.1_01858 Serine protease HtrA-like protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MDNDKKQVIPRSKYGRKRHEYFHNEEREERIERERQKREHLAEKEQHQAKVNEERVKDNLRKARIEKLTQEEIQQQQHLAKLRSKRDASNTAKKNNRHHLTLPEEQHLKQEDIHNEELKQQKPISSNGSKSENETNKSIEPTYSRLNKNNESRPKSKQEKDNQHNDTIKTQSKHPTITEESYTSTKDKESIHTEKEQVSTQQRSTQVEHTKSEQSKHISNSDKNTTENISDQQPHESYEQSANDTQNKIVDFLKEHWIKILIAIALILILVLVKAIFTEPSQEQHSNQTHTQDKKYTTTMKNANNTVRSVVTVESDAPKNTSVQKTNSKLDSELGSGVVYKTVGDTFFVLTNTHIVGEADKVKITYGENKSIKGDVVGKDKWSDIAVVKAKINDKNINSIHIGNSDKLVLGESILIVGNPLGEEFRNTVSKGIISGLNRLVPVDFDKDNKNDELMQTFQIDASVNPGNSGGAVVNKDGELIGIVSLKINMPSIEGMGFAIPINEAKSIAKELEKNGKVNYPNTGIALENVNDLNHYERSLLKLPNDINDGILVKKLKDDGLGKKSGLKIGDVIVKLEGKTLKDNLQYRHILFNHRQDLKTLTAKIYRDGNIQDIEINLK persistent 619 Serine protease HtrA-like WP_137689644.1 UPI0010F7207E UniRef100_UPI0010F7207E,UniRef50_Q5HQE2,UniRef90_A0A3S7GX32 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 111085 112443 . + . GCA_005502385.1_01859_gene GCA_005502385.1_01859 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSIFSKLFKKSTPQQGIVLYYLIAIVVAFLLLNLPFVHKPGVKVSPIDTLFVAVSGISVTGLTPVSIIDTYSSFGQLIILIILNIGGIGVMAIGTVLWVVLGKHIGMRERQLIMLDNNKDTMSGTVKLIIEIVKTIMTIEIVGALLLAFYFYRDNPDLKNALMQGLFVSISATTNGGLDITGQSLVPYAKDYFVQTIVMFLIILGSIGFPVLLEIRAYIRNRVSHFRFSLFTKITTTTYFFLFISGFLSILALEYNHAFKGYNWHQSLFYALFQSATTRSAGLQTIDVTHFSDATNVIMSILMFIGSSPSSVGGGIRTTTFAILILFVINFNNNTEKSSIKVFNREIHTIDIQRSFAVFIMATVLTFVSIIIILAAEANNLSFLQVFFEVMSAFGTCGLSLGVTDNISSITKVVLMLLMFIGRVGLISFIIMISGRKEPDKFSYPKERIQIG . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 111085 112443 . + . GCA_005502385.1_01859_mRNA GCA_005502385.1_01859 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSIFSKLFKKSTPQQGIVLYYLIAIVVAFLLLNLPFVHKPGVKVSPIDTLFVAVSGISVTGLTPVSIIDTYSSFGQLIILIILNIGGIGVMAIGTVLWVVLGKHIGMRERQLIMLDNNKDTMSGTVKLIIEIVKTIMTIEIVGALLLAFYFYRDNPDLKNALMQGLFVSISATTNGGLDITGQSLVPYAKDYFVQTIVMFLIILGSIGFPVLLEIRAYIRNRVSHFRFSLFTKITTTTYFFLFISGFLSILALEYNHAFKGYNWHQSLFYALFQSATTRSAGLQTIDVTHFSDATNVIMSILMFIGSSPSSVGGGIRTTTFAILILFVINFNNNTEKSSIKVFNREIHTIDIQRSFAVFIMATVLTFVSIIIILAAEANNLSFLQVFFEVMSAFGTCGLSLGVTDNISSITKVVLMLLMFIGRVGLISFIIMISGRKEPDKFSYPKERIQIG . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 111085 112443 . + 0 GCA_005502385.1_01859 GCA_005502385.1_01859_gene,GCA_005502385.1_01859_mRNA GCA_005502385.1_01859 Ktr system potassium uptake protein B GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSIFSKLFKKSTPQQGIVLYYLIAIVVAFLLLNLPFVHKPGVKVSPIDTLFVAVSGISVTGLTPVSIIDTYSSFGQLIILIILNIGGIGVMAIGTVLWVVLGKHIGMRERQLIMLDNNKDTMSGTVKLIIEIVKTIMTIEIVGALLLAFYFYRDNPDLKNALMQGLFVSISATTNGGLDITGQSLVPYAKDYFVQTIVMFLIILGSIGFPVLLEIRAYIRNRVSHFRFSLFTKITTTTYFFLFISGFLSILALEYNHAFKGYNWHQSLFYALFQSATTRSAGLQTIDVTHFSDATNVIMSILMFIGSSPSSVGGGIRTTTFAILILFVINFNNNTEKSSIKVFNREIHTIDIQRSFAVFIMATVLTFVSIIIILAAEANNLSFLQVFFEVMSAFGTCGLSLGVTDNISSITKVVLMLLMFIGRVGLISFIIMISGRKEPDKFSYPKERIQIG persistent 452 ATP synthase WP_002488327.1 UPI00024E211D UniRef100_UPI00024E211D,UniRef50_O31658,UniRef90_A0A3S7GT83 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 112607 113209 . - . GCA_005502385.1_01860_gene GCA_005502385.1_01860 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKNTSKPLIWFVASFIVFHLILFIMWGEHQEYWYLYTGIMLIAGISYVFYQRDITSKRLLTSIGVGVITGVVLVIIQLIFSLISSQITYTELIKELSRTGVYFKWQMLVTILFVIPCHELYMRAVLQKELNKFRLPRWLTILIPALCSSSLFIYLDKWWIVIFIFIAQVILSLSYQYTRRIVTSSLGQIVAIILLLIFHG . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 112607 113209 . - . GCA_005502385.1_01860_mRNA GCA_005502385.1_01860 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKNTSKPLIWFVASFIVFHLILFIMWGEHQEYWYLYTGIMLIAGISYVFYQRDITSKRLLTSIGVGVITGVVLVIIQLIFSLISSQITYTELIKELSRTGVYFKWQMLVTILFVIPCHELYMRAVLQKELNKFRLPRWLTILIPALCSSSLFIYLDKWWIVIFIFIAQVILSLSYQYTRRIVTSSLGQIVAIILLLIFHG . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 112607 113209 . - 0 GCA_005502385.1_01860 GCA_005502385.1_01860_gene,GCA_005502385.1_01860_mRNA GCA_005502385.1_01860 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKNTSKPLIWFVASFIVFHLILFIMWGEHQEYWYLYTGIMLIAGISYVFYQRDITSKRLLTSIGVGVITGVVLVIIQLIFSLISSQITYTELIKELSRTGVYFKWQMLVTILFVIPCHELYMRAVLQKELNKFRLPRWLTILIPALCSSSLFIYLDKWWIVIFIFIAQVILSLSYQYTRRIVTSSLGQIVAIILLLIFHG persistent 200 CPBP family intramembrane metalloprotease WP_019835286.1 UPI00037B6232 UniRef100_UPI00037B6232,UniRef50_Q2FZN5,UniRef90_A0A974L241 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 113225 113401 . - . GCA_005502385.1_01861_gene GCA_005502385.1_01861 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTVAEVGNIVEFYDGLRGRVEKINDNSVIVDLTIMENFNELDLPEKTVINHKRYKIVE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 113225 113401 . - . GCA_005502385.1_01861_mRNA GCA_005502385.1_01861 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTVAEVGNIVEFYDGLRGRVEKINDNSVIVDLTIMENFNELDLPEKTVINHKRYKIVE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 113225 113401 . - 0 GCA_005502385.1_01861 GCA_005502385.1_01861_gene,GCA_005502385.1_01861_mRNA GCA_005502385.1_01861 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTVAEVGNIVEFYDGLRGRVEKINDNSVIVDLTIMENFNELDLPEKTVINHKRYKIVE persistent 58 ykvS DUF2187 domain-containing protein COG4873,S WP_002448045.1 UPI00019FC7A4 UniRef100_A0A0U1EK20,UniRef50_Q2FZN6,UniRef90_Q2FZN6 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 113590 114579 . + . GCA_005502385.1_01862_gene GCA_005502385.1_01862 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKFVSNNNITDPTINLAMEEYVLKYLPADDSYFLFYVNEPSIIVGKNQNTIEEVNKQYVDEHHIHVVRRISGGGAVYHDKGNLNFSFVTSDDGNSFHNFKKFTEPIVQALQSMGVDAEMTGRNDIQVGAAKISGNAMVKVKNRMFSHGTLMLNSDLEEVQNALKVNPKKIQSKGVKSVRKRVANIEEFLDDSITIDQFKQIILKNIFGEHEVEEYHLTEEDWNNIKQLSNEKYRTWDWNYGKNPKYNFERDEKFEKGFIQIKFDVKKGKIEHAKIFGDFFGEGNVNELEDALVGTLHDYTHIKEVMEDYDFYHYFGDIDKDSILKLMAY . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 113590 114579 . + . GCA_005502385.1_01862_mRNA GCA_005502385.1_01862 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKFVSNNNITDPTINLAMEEYVLKYLPADDSYFLFYVNEPSIIVGKNQNTIEEVNKQYVDEHHIHVVRRISGGGAVYHDKGNLNFSFVTSDDGNSFHNFKKFTEPIVQALQSMGVDAEMTGRNDIQVGAAKISGNAMVKVKNRMFSHGTLMLNSDLEEVQNALKVNPKKIQSKGVKSVRKRVANIEEFLDDSITIDQFKQIILKNIFGEHEVEEYHLTEEDWNNIKQLSNEKYRTWDWNYGKNPKYNFERDEKFEKGFIQIKFDVKKGKIEHAKIFGDFFGEGNVNELEDALVGTLHDYTHIKEVMEDYDFYHYFGDIDKDSILKLMAY . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 113590 114579 . + 0 GCA_005502385.1_01862 GCA_005502385.1_01862_gene,GCA_005502385.1_01862_mRNA GCA_005502385.1_01862 Lipoate--protein ligase 1 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKFVSNNNITDPTINLAMEEYVLKYLPADDSYFLFYVNEPSIIVGKNQNTIEEVNKQYVDEHHIHVVRRISGGGAVYHDKGNLNFSFVTSDDGNSFHNFKKFTEPIVQALQSMGVDAEMTGRNDIQVGAAKISGNAMVKVKNRMFSHGTLMLNSDLEEVQNALKVNPKKIQSKGVKSVRKRVANIEEFLDDSITIDQFKQIILKNIFGEHEVEEYHLTEEDWNNIKQLSNEKYRTWDWNYGKNPKYNFERDEKFEKGFIQIKFDVKKGKIEHAKIFGDFFGEGNVNELEDALVGTLHDYTHIKEVMEDYDFYHYFGDIDKDSILKLMAY persistent 329 lipoate--protein ligase 6.3.1.20 WP_048762301.1 UPI000660BCF6 UniRef100_UPI000660BCF6,UniRef50_O07608,UniRef90_A0A3S7GXU1 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 114752 115813 . - . GCA_005502385.1_01863_gene GCA_005502385.1_01863 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSVKKINSTWTYDFQYNGKRYRKRGFRTKRDASQAEKELYIDLSRGGQLADDITFIEYFERWIKVNKVDRVSQSTLNRYYSALNVFEEKFGSVLIKDVSQLGYREMLKEYAEGQFIGGRKEGRTKESVKKLNNCFSQAFKDALNERLIYKDPTWNAPIYEKKAAMSEKQKYLSLKDYQLLKQTASTKSHLSYLAIYLLIATGARFGEVQKLKRMDINKSKNTIHLRGTKTKSADRYVTITSKDMKHIIEVINSRPLHKDGYIFNTGVSLITNKAVTTAMRNILAKHELKSDYGLHSLRHTHASMLLGHGFSIQYVSKRLGHANIEITWRVYSHLLDEMKLQEDEMLDSKLSFF . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 114752 115813 . - . GCA_005502385.1_01863_mRNA GCA_005502385.1_01863 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSVKKINSTWTYDFQYNGKRYRKRGFRTKRDASQAEKELYIDLSRGGQLADDITFIEYFERWIKVNKVDRVSQSTLNRYYSALNVFEEKFGSVLIKDVSQLGYREMLKEYAEGQFIGGRKEGRTKESVKKLNNCFSQAFKDALNERLIYKDPTWNAPIYEKKAAMSEKQKYLSLKDYQLLKQTASTKSHLSYLAIYLLIATGARFGEVQKLKRMDINKSKNTIHLRGTKTKSADRYVTITSKDMKHIIEVINSRPLHKDGYIFNTGVSLITNKAVTTAMRNILAKHELKSDYGLHSLRHTHASMLLGHGFSIQYVSKRLGHANIEITWRVYSHLLDEMKLQEDEMLDSKLSFF . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 114752 115813 . - 0 GCA_005502385.1_01863 GCA_005502385.1_01863_gene,GCA_005502385.1_01863_mRNA GCA_005502385.1_01863 Tyrosine recombinase XerC GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSVKKINSTWTYDFQYNGKRYRKRGFRTKRDASQAEKELYIDLSRGGQLADDITFIEYFERWIKVNKVDRVSQSTLNRYYSALNVFEEKFGSVLIKDVSQLGYREMLKEYAEGQFIGGRKEGRTKESVKKLNNCFSQAFKDALNERLIYKDPTWNAPIYEKKAAMSEKQKYLSLKDYQLLKQTASTKSHLSYLAIYLLIATGARFGEVQKLKRMDINKSKNTIHLRGTKTKSADRYVTITSKDMKHIIEVINSRPLHKDGYIFNTGVSLITNKAVTTAMRNILAKHELKSDYGLHSLRHTHASMLLGHGFSIQYVSKRLGHANIEITWRVYSHLLDEMKLQEDEMLDSKLSFF cloud 353 Integrase WP_137689645.1 UPI0010F79972 UniRef100_UPI0010F79972,UniRef50_A0A2H4JGN1,UniRef90_A0A2H4JGN1 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 115926 116537 . - . GCA_005502385.1_01864_gene GCA_005502385.1_01864 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKKFLALIFSGALILGACGNDDTSNKDSDSKTENKTEKKSEDKKDNKSKEDKKSKEEKKSQENEDNKSTQENDSSKEPNTQETATNEQVQSQQQTQQTQQPATQEQQQAQQNGEYDSTKHSDEYNASHPVSTDDDWTPEMIEENDRLNKEMEANAKVAKENGYTGIPNGDVGGVPTPDKYYSDDQLDPDTGLPMEDAVPHDVE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 115926 116537 . - . GCA_005502385.1_01864_mRNA GCA_005502385.1_01864 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKKFLALIFSGALILGACGNDDTSNKDSDSKTENKTEKKSEDKKDNKSKEDKKSKEEKKSQENEDNKSTQENDSSKEPNTQETATNEQVQSQQQTQQTQQPATQEQQQAQQNGEYDSTKHSDEYNASHPVSTDDDWTPEMIEENDRLNKEMEANAKVAKENGYTGIPNGDVGGVPTPDKYYSDDQLDPDTGLPMEDAVPHDVE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 115926 116537 . - 0 GCA_005502385.1_01864 GCA_005502385.1_01864_gene,GCA_005502385.1_01864_mRNA GCA_005502385.1_01864 hypothetical protein """""" GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKKFLALIFSGALILGACGNDDTSNKDSDSKTENKTEKKSEDKKDNKSKEDKKSKEEKKSQENEDNKSTQENDSSKEPNTQETATNEQVQSQQQTQQTQQPATQEQQQAQQNGEYDSTKHSDEYNASHPVSTDDDWTPEMIEENDRLNKEMEANAKVAKENGYTGIPNGDVGGVPTPDKYYSDDQLDPDTGLPMEDAVPHDVE cloud 203 Lipoprotein WP_137689646.1 UPI0010F6C6BA UniRef100_UPI0010F6C6BA,UniRef50_A0A2H4JHI9,UniRef90_UPI0010E38777 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 116631 117227 . + . GCA_005502385.1_01865_gene GCA_005502385.1_01865 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MELLLLLITSGIPGFYTYYSLSNKNTIYYDSDNKNIILSFFSIISILIFILILSLFSNINNVNELFTHLTFTKLLLALVASVFIIVILTEIIYPLLFDLYNSFLNLDRNRHNLSKASTMPIHLSRYEDENHQIFVEIKTFDGSNIDDGVIKSYSKKSNRNLILQPIDEQYKIPLKTECLKTEKFIDFENQIIIYYYFL . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 116631 117227 . + . GCA_005502385.1_01865_mRNA GCA_005502385.1_01865 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MELLLLLITSGIPGFYTYYSLSNKNTIYYDSDNKNIILSFFSIISILIFILILSLFSNINNVNELFTHLTFTKLLLALVASVFIIVILTEIIYPLLFDLYNSFLNLDRNRHNLSKASTMPIHLSRYEDENHQIFVEIKTFDGSNIDDGVIKSYSKKSNRNLILQPIDEQYKIPLKTECLKTEKFIDFENQIIIYYYFL . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 116631 117227 . + 0 GCA_005502385.1_01865 GCA_005502385.1_01865_gene,GCA_005502385.1_01865_mRNA GCA_005502385.1_01865 hypothetical protein """""" GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MELLLLLITSGIPGFYTYYSLSNKNTIYYDSDNKNIILSFFSIISILIFILILSLFSNINNVNELFTHLTFTKLLLALVASVFIIVILTEIIYPLLFDLYNSFLNLDRNRHNLSKASTMPIHLSRYEDENHQIFVEIKTFDGSNIDDGVIKSYSKKSNRNLILQPIDEQYKIPLKTECLKTEKFIDFENQIIIYYYFL cloud 198 Phage protein WP_137689647.1 UPI0010F6F0E8 UniRef100_UPI0010F6F0E8,UniRef50_A0A077UK02,UniRef90_UPI0010F6F0E8 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 117215 117364 . - . GCA_005502385.1_01866_gene GCA_005502385.1_01866 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTENNDWQKNGQYNSGEKVEKRNEAGNKSGLNDEQLEKYKKQYEENHKK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 117215 117364 . - . GCA_005502385.1_01866_mRNA GCA_005502385.1_01866 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTENNDWQKNGQYNSGEKVEKRNEAGNKSGLNDEQLEKYKKQYEENHKK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 117215 117364 . - 0 GCA_005502385.1_01866 GCA_005502385.1_01866_gene,GCA_005502385.1_01866_mRNA GCA_005502385.1_01866 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTENNDWQKNGQYNSGEKVEKRNEAGNKSGLNDEQLEKYKKQYEENHKK cloud 49 hypothetical protein . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 117544 118059 . - . GCA_005502385.1_01867_gene GCA_005502385.1_01867 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MANKKKNLELIKNSFLHENEEIAHAIFGAYETKSLGNDTVKNGVLAATEERIIFCAKRLSGYDSEIFHYNKISTFELSKKIMGNIVTFYSSGNKVSIKWINDDELDDFIEYVNKKIDGKEKDTQNVLESEHNTSNDDLESFKKIKMLKELLDIGAITQDEFETKKKQLLNL . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 117544 118059 . - . GCA_005502385.1_01867_mRNA GCA_005502385.1_01867 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MANKKKNLELIKNSFLHENEEIAHAIFGAYETKSLGNDTVKNGVLAATEERIIFCAKRLSGYDSEIFHYNKISTFELSKKIMGNIVTFYSSGNKVSIKWINDDELDDFIEYVNKKIDGKEKDTQNVLESEHNTSNDDLESFKKIKMLKELLDIGAITQDEFETKKKQLLNL . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 117544 118059 . - 0 GCA_005502385.1_01867 GCA_005502385.1_01867_gene,GCA_005502385.1_01867_mRNA GCA_005502385.1_01867 hypothetical protein """""" GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MANKKKNLELIKNSFLHENEEIAHAIFGAYETKSLGNDTVKNGVLAATEERIIFCAKRLSGYDSEIFHYNKISTFELSKKIMGNIVTFYSSGNKVSIKWINDDELDDFIEYVNKKIDGKEKDTQNVLESEHNTSNDDLESFKKIKMLKELLDIGAITQDEFETKKKQLLNL cloud 171 SHOCT domain-containing protein WP_048762350.1 UPI000661481F UniRef100_A0AA49X276,UniRef50_A0A0C2H7U3,UniRef90_A0A0D4DCT6 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 118132 118533 . - . GCA_005502385.1_01868_gene GCA_005502385.1_01868 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFENLLASIGINSVKVETLVKNKSIHSNDTLEGIVRIEGGNSSQTINKVSLTLVERYENPDKKSQFPVLENELQTFTLHTNVELKEHHTITEEFKFNIYEYEFKSEPKHLILKTHAYVGYSVDAYDEDKIFFK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 118132 118533 . - . GCA_005502385.1_01868_mRNA GCA_005502385.1_01868 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFENLLASIGINSVKVETLVKNKSIHSNDTLEGIVRIEGGNSSQTINKVSLTLVERYENPDKKSQFPVLENELQTFTLHTNVELKEHHTITEEFKFNIYEYEFKSEPKHLILKTHAYVGYSVDAYDEDKIFFK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 118132 118533 . - 0 GCA_005502385.1_01868 GCA_005502385.1_01868_gene,GCA_005502385.1_01868_mRNA GCA_005502385.1_01868 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFENLLASIGINSVKVETLVKNKSIHSNDTLEGIVRIEGGNSSQTINKVSLTLVERYENPDKKSQFPVLENELQTFTLHTNVELKEHHTITEEFKFNIYEYEFKSEPKHLILKTHAYVGYSVDAYDEDKIFFK shell 133 spo0M Sporulation protein COG4326,D WP_137689648.1 UPI0010F4CA01 UniRef100_UPI0010F4CA01,UniRef50_A0A2A1KAT4,UniRef90_A0A2A1KAT4 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 118670 119221 . - . GCA_005502385.1_01869_gene GCA_005502385.1_01869 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MEEKFNNEQEERQFRQFQEYQKQQDEEKKKKRKKGWLFGCGGCLVLLILLIIGLTSCTGAFVNEVDKQMNEDSSEVKEDKNASKEQTAALNSAKNYADGMHMSKQGIYEQLTSSAGDKFSEEDAQYAVDHLKADYKKNALESAKSYQEDMNMSKDAIYDQLISNSGDKFTEEEAQYAVDNLDK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 118670 119221 . - . GCA_005502385.1_01869_mRNA GCA_005502385.1_01869 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MEEKFNNEQEERQFRQFQEYQKQQDEEKKKKRKKGWLFGCGGCLVLLILLIIGLTSCTGAFVNEVDKQMNEDSSEVKEDKNASKEQTAALNSAKNYADGMHMSKQGIYEQLTSSAGDKFSEEDAQYAVDHLKADYKKNALESAKSYQEDMNMSKDAIYDQLISNSGDKFTEEEAQYAVDNLDK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 118670 119221 . - 0 GCA_005502385.1_01869 GCA_005502385.1_01869_gene,GCA_005502385.1_01869_mRNA GCA_005502385.1_01869 hypothetical protein """""" GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MEEKFNNEQEERQFRQFQEYQKQQDEEKKKKRKKGWLFGCGGCLVLLILLIIGLTSCTGAFVNEVDKQMNEDSSEVKEDKNASKEQTAALNSAKNYADGMHMSKQGIYEQLTSSAGDKFSEEDAQYAVDHLKADYKKNALESAKSYQEDMNMSKDAIYDQLISNSGDKFTEEEAQYAVDNLDK shell 183 Putative host cell surface-exposed lipoprotein Ltp-like HTH region domain-containing protein WP_137689649.1 UPI0010F85F88 UniRef100_UPI0010F85F88,UniRef50_A0A2K4FH92,UniRef90_A0A6N0I1R8 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 119323 119784 . - . GCA_005502385.1_01870_gene GCA_005502385.1_01870 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MERYEELLIKYNHLLINDCYKLPGNFKGFYDNGVILIDKNLSKAKKLEVLAEELAHHEITYGNIIDQKNIQNRKYELKARRLANEKIITLKGIIEAFMQGIHNLYELANFFEVTESFVLQSITHYKQKYGYSTQYGKYIIQFEPLRVFEYKDI . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 119323 119784 . - . GCA_005502385.1_01870_mRNA GCA_005502385.1_01870 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MERYEELLIKYNHLLINDCYKLPGNFKGFYDNGVILIDKNLSKAKKLEVLAEELAHHEITYGNIIDQKNIQNRKYELKARRLANEKIITLKGIIEAFMQGIHNLYELANFFEVTESFVLQSITHYKQKYGYSTQYGKYIIQFEPLRVFEYKDI . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 119323 119784 . - 0 GCA_005502385.1_01870 GCA_005502385.1_01870_gene,GCA_005502385.1_01870_mRNA GCA_005502385.1_01870 hypothetical protein """""" GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MERYEELLIKYNHLLINDCYKLPGNFKGFYDNGVILIDKNLSKAKKLEVLAEELAHHEITYGNIIDQKNIQNRKYELKARRLANEKIITLKGIIEAFMQGIHNLYELANFFEVTESFVLQSITHYKQKYGYSTQYGKYIIQFEPLRVFEYKDI shell 153 ImmA/IrrE family metallo-endopeptidase WP_137689650.1 UPI0010F89110 UniRef100_UPI0010F89110,UniRef50_A0AAE7SRF6,UniRef90_A0A6N0I1V3 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 119789 120103 . - . GCA_005502385.1_01871_gene GCA_005502385.1_01871 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSKTILSNNLKDLLNRKGKTQTDMAKELDLKESTVSSWINGLKYPRRNKIELLADYFNVQPSDITDDKNTYDTIAAHLDDDFTEEELQKIRDFAELVRQARKKD . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 119789 120103 . - . GCA_005502385.1_01871_mRNA GCA_005502385.1_01871 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSKTILSNNLKDLLNRKGKTQTDMAKELDLKESTVSSWINGLKYPRRNKIELLADYFNVQPSDITDDKNTYDTIAAHLDDDFTEEELQKIRDFAELVRQARKKD . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 119789 120103 . - 0 GCA_005502385.1_01871 GCA_005502385.1_01871_gene,GCA_005502385.1_01871_mRNA GCA_005502385.1_01871 hypothetical protein """""" GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSKTILSNNLKDLLNRKGKTQTDMAKELDLKESTVSSWINGLKYPRRNKIELLADYFNVQPSDITDDKNTYDTIAAHLDDDFTEEELQKIRDFAELVRQARKKD cloud 104 HTH cro/C1-type domain-containing protein UniRef50_A0AAE7STK5,UniRef90_A0A2H4JGZ6 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 120312 120548 . + . GCA_005502385.1_01872_gene GCA_005502385.1_01872 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MVEKLETLSLKGARNEFGYTQQEIADRLGVTKNAYIQWEKGKVVPKHMAIYALAYIYGIKADMLRLPQKILDYTSLLV . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 120312 120548 . + . GCA_005502385.1_01872_mRNA GCA_005502385.1_01872 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MVEKLETLSLKGARNEFGYTQQEIADRLGVTKNAYIQWEKGKVVPKHMAIYALAYIYGIKADMLRLPQKILDYTSLLV . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 120312 120548 . + 0 GCA_005502385.1_01872 GCA_005502385.1_01872_gene,GCA_005502385.1_01872_mRNA GCA_005502385.1_01872 hypothetical protein """""" GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MVEKLETLSLKGARNEFGYTQQEIADRLGVTKNAYIQWEKGKVVPKHMAIYALAYIYGIKADMLRLPQKILDYTSLLV cloud 78 Helix-turn-helix domain-containing protein UniRef50_A0A499SJH1,UniRef90_A0A6N0I260 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 120591 121385 . + . GCA_005502385.1_01873_gene GCA_005502385.1_01873 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNELQTFNFEDLPVGTLKIEDELYMVGNEVAKILGYSNYRNAISNHVDEEDKLRTQVEYAGQTRTVTIINESGLYSLIFDAAKQSKNENIRKKAKRFKRWVTEDVLPSIRKHGIYATDNVIEQTLRNPDYIINVLTEYKKEKEHNLLLQRQVGELKPKADYYDQILKSKKLITVNAIAKDYGMSAQVLNKILHDLKVQFKQSGQWLLYAKYHDKGYTSSEPHKYTKKDGTEDFKLHTKWTQKGRIFLYNLLKDNDILPTIEQTT . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 120591 121385 . + . GCA_005502385.1_01873_mRNA GCA_005502385.1_01873 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNELQTFNFEDLPVGTLKIEDELYMVGNEVAKILGYSNYRNAISNHVDEEDKLRTQVEYAGQTRTVTIINESGLYSLIFDAAKQSKNENIRKKAKRFKRWVTEDVLPSIRKHGIYATDNVIEQTLRNPDYIINVLTEYKKEKEHNLLLQRQVGELKPKADYYDQILKSKKLITVNAIAKDYGMSAQVLNKILHDLKVQFKQSGQWLLYAKYHDKGYTSSEPHKYTKKDGTEDFKLHTKWTQKGRIFLYNLLKDNDILPTIEQTT . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 120591 121385 . + 0 GCA_005502385.1_01873 GCA_005502385.1_01873_gene,GCA_005502385.1_01873_mRNA GCA_005502385.1_01873 hypothetical protein """""" GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNELQTFNFEDLPVGTLKIEDELYMVGNEVAKILGYSNYRNAISNHVDEEDKLRTQVEYAGQTRTVTIINESGLYSLIFDAAKQSKNENIRKKAKRFKRWVTEDVLPSIRKHGIYATDNVIEQTLRNPDYIINVLTEYKKEKEHNLLLQRQVGELKPKADYYDQILKSKKLITVNAIAKDYGMSAQVLNKILHDLKVQFKQSGQWLLYAKYHDKGYTSSEPHKYTKKDGTEDFKLHTKWTQKGRIFLYNLLKDNDILPTIEQTT cloud 264 phage antirepressor KilAC domain-containing protein WP_137689652.1 UPI0010F89169 UniRef100_UPI0010F89169,UniRef50_A0A499SQU3,UniRef90_UPI0010F89169 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 121401 121589 . + . GCA_005502385.1_01874_gene GCA_005502385.1_01874 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNEKINYAKIALLTIILADLVKNTIKKNKATITTESFIIPKDSESATDSARRLLKSAEQHCK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 121401 121589 . + . GCA_005502385.1_01874_mRNA GCA_005502385.1_01874 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNEKINYAKIALLTIILADLVKNTIKKNKATITTESFIIPKDSESATDSARRLLKSAEQHCK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 121401 121589 . + 0 GCA_005502385.1_01874 GCA_005502385.1_01874_gene,GCA_005502385.1_01874_mRNA GCA_005502385.1_01874 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNEKINYAKIALLTIILADLVKNTIKKNKATITTESFIIPKDSESATDSARRLLKSAEQHCK cloud 62 hypothetical protein UniRef50_UPI00115B5B43 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 121537 121779 . - . GCA_005502385.1_01875_gene GCA_005502385.1_01875 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTWYEFEKYFSSFQPEVEKQFGNDSEYFRDLLSELKRDNSEGFSEEFLYSLAMNECSKLYSETLIYNVARQILKDDEQNQ . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 121537 121779 . - . GCA_005502385.1_01875_mRNA GCA_005502385.1_01875 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTWYEFEKYFSSFQPEVEKQFGNDSEYFRDLLSELKRDNSEGFSEEFLYSLAMNECSKLYSETLIYNVARQILKDDEQNQ . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 121537 121779 . - 0 GCA_005502385.1_01875 GCA_005502385.1_01875_gene,GCA_005502385.1_01875_mRNA GCA_005502385.1_01875 hypothetical protein """""" GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTWYEFEKYFSSFQPEVEKQFGNDSEYFRDLLSELKRDNSEGFSEEFLYSLAMNECSKLYSETLIYNVARQILKDDEQNQ cloud 80 Phage protein WP_137689653.1 UPI0010F8FE66 UniRef100_UPI0010F8FE66,UniRef50_A0A6N3B112,UniRef90_UPI0009F3843D . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 121844 122014 . + . GCA_005502385.1_01876_gene GCA_005502385.1_01876 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNILYKITLLTTMAVVIWKVMKIEKNTRKIDYSLSISTLDLPKLSAKSIASMYSLK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 121844 122014 . + . GCA_005502385.1_01876_mRNA GCA_005502385.1_01876 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNILYKITLLTTMAVVIWKVMKIEKNTRKIDYSLSISTLDLPKLSAKSIASMYSLK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 121844 122014 . + 0 GCA_005502385.1_01876 GCA_005502385.1_01876_gene,GCA_005502385.1_01876_mRNA GCA_005502385.1_01876 hypothetical protein """""" GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNILYKITLLTTMAVVIWKVMKIEKNTRKIDYSLSISTLDLPKLSAKSIASMYSLK cloud 56 Secreted protein UniRef50_A0AAQ0DAA5,UniRef90_A0A2H4J3T9 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 121936 122148 . - . GCA_005502385.1_01877_gene GCA_005502385.1_01877 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAKGTHYSPKEFAAAYIQTLPHAKDIEEFNSNADYWEYLKKRRNLYFNEYIDAIDFADSFGKSSVEIDKE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 121936 122148 . - . GCA_005502385.1_01877_mRNA GCA_005502385.1_01877 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAKGTHYSPKEFAAAYIQTLPHAKDIEEFNSNADYWEYLKKRRNLYFNEYIDAIDFADSFGKSSVEIDKE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 121936 122148 . - 0 GCA_005502385.1_01877 GCA_005502385.1_01877_gene,GCA_005502385.1_01877_mRNA GCA_005502385.1_01877 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAKGTHYSPKEFAAAYIQTLPHAKDIEEFNSNADYWEYLKKRRNLYFNEYIDAIDFADSFGKSSVEIDKE cloud 70 SaV-like WP_137689654.1 UPI0010F99CED UniRef100_UPI0010F99CED,UniRef50_A0AAJ0JND2,UniRef90_A0A2H4J5G5 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 122209 122370 . + . GCA_005502385.1_01878_gene GCA_005502385.1_01878 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFKRKKENRIELKINITNRNELDELLETIQKDIAALKDDFDKLEKFKLTFELE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 122209 122370 . + . GCA_005502385.1_01878_mRNA GCA_005502385.1_01878 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFKRKKENRIELKINITNRNELDELLETIQKDIAALKDDFDKLEKFKLTFELE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 122209 122370 . + 0 GCA_005502385.1_01878 GCA_005502385.1_01878_gene,GCA_005502385.1_01878_mRNA GCA_005502385.1_01878 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFKRKKENRIELKINITNRNELDELLETIQKDIAALKDDFDKLEKFKLTFELE shell 53 hypothetical protein WP_186301966.1 UPI0016426E82 UniRef100_UPI0016426E82,UniRef50_A0AAW7M6Z6,UniRef90_UPI0016427757 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 122351 122554 . - . GCA_005502385.1_01879_gene GCA_005502385.1_01879 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAKKSNVSIDFDRKQFDKDLQKALDKQLAKFDKKMNCPACEKKVTFKFRNYKAKCPKCGVELTLTRK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 122351 122554 . - . GCA_005502385.1_01879_mRNA GCA_005502385.1_01879 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAKKSNVSIDFDRKQFDKDLQKALDKQLAKFDKKMNCPACEKKVTFKFRNYKAKCPKCGVELTLTRK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 122351 122554 . - 0 GCA_005502385.1_01879 GCA_005502385.1_01879_gene,GCA_005502385.1_01879_mRNA GCA_005502385.1_01879 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAKKSNVSIDFDRKQFDKDLQKALDKQLAKFDKKMNCPACEKKVTFKFRNYKAKCPKCGVELTLTRK shell 67 hypothetical protein WP_137689655.1 UPI0010F7F376 UniRef100_UPI0010F7F376,UniRef50_A0A8X8KGG6,UniRef90_UPI0010F7F376 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 122780 123253 . - . GCA_005502385.1_01880_gene GCA_005502385.1_01880 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNINYFYKNATICLNGHIVSKDEANYSKFCKVCGETNISECQHCTTPIQGVIYIPDGFPITNYNRPNYCHACGKPYPWTEKIINNAVELVSLDDQLSDDYKEIIKNALPDLITDTLNTPIAQVKYKKYMSSASKYIQDSARNLLIDVVSDAVKKSIF . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 122780 123253 . - . GCA_005502385.1_01880_mRNA GCA_005502385.1_01880 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNINYFYKNATICLNGHIVSKDEANYSKFCKVCGETNISECQHCTTPIQGVIYIPDGFPITNYNRPNYCHACGKPYPWTEKIINNAVELVSLDDQLSDDYKEIIKNALPDLITDTLNTPIAQVKYKKYMSSASKYIQDSARNLLIDVVSDAVKKSIF . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 122780 123253 . - 0 GCA_005502385.1_01880 GCA_005502385.1_01880_gene,GCA_005502385.1_01880_mRNA GCA_005502385.1_01880 hypothetical protein """""" GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNINYFYKNATICLNGHIVSKDEANYSKFCKVCGETNISECQHCTTPIQGVIYIPDGFPITNYNRPNYCHACGKPYPWTEKIINNAVELVSLDDQLSDDYKEIIKNALPDLITDTLNTPIAQVKYKKYMSSASKYIQDSARNLLIDVVSDAVKKSIF cloud 157 DUF2321 domain-containing protein WP_170999984.1 UPI001485057A UniRef100_UPI001485057A,UniRef50_UPI001485057A,UniRef90_UPI001485057A . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 123316 123618 . + . GCA_005502385.1_01881_gene GCA_005502385.1_01881 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNQTLTVRIPDTHVLIPKIELEKLISKTLPVTWTMEDLIKESKLSRYLIFKRILEVPRFNKYLKENGIWFEGQGGSSSHYFDAELMWKFLKDYKKEIYNG . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 123316 123618 . + . GCA_005502385.1_01881_mRNA GCA_005502385.1_01881 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNQTLTVRIPDTHVLIPKIELEKLISKTLPVTWTMEDLIKESKLSRYLIFKRILEVPRFNKYLKENGIWFEGQGGSSSHYFDAELMWKFLKDYKKEIYNG . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 123316 123618 . + 0 GCA_005502385.1_01881 GCA_005502385.1_01881_gene,GCA_005502385.1_01881_mRNA GCA_005502385.1_01881 hypothetical protein """""" GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNQTLTVRIPDTHVLIPKIELEKLISKTLPVTWTMEDLIKESKLSRYLIFKRILEVPRFNKYLKENGIWFEGQGGSSSHYFDAELMWKFLKDYKKEIYNG cloud 100 DUF771 domain-containing protein WP_170999985.1 UPI001484E29B UniRef100_UPI001484E29B,UniRef50_A0A2H4JAR4,UniRef90_A0A2H4JAR4 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 123652 123825 . + . GCA_005502385.1_01882_gene GCA_005502385.1_01882 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSYSEAAFIIAILIFILGSIILMTAQFYITDALGISLFAAVTTFLYFDKEFEKLKKD . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 123652 123825 . + . GCA_005502385.1_01882_mRNA GCA_005502385.1_01882 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSYSEAAFIIAILIFILGSIILMTAQFYITDALGISLFAAVTTFLYFDKEFEKLKKD . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 123652 123825 . + 0 GCA_005502385.1_01882 GCA_005502385.1_01882_gene,GCA_005502385.1_01882_mRNA GCA_005502385.1_01882 hypothetical protein """""" GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSYSEAAFIIAILIFILGSIILMTAQFYITDALGISLFAAVTTFLYFDKEFEKLKKD cloud 57 DUF1270 domain-containing protein WP_137689658.1 UPI0010F84E6F UniRef100_UPI0010F84E6F,UniRef50_A0A2H4JAQ6,UniRef90_UPI0010F84E6F . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 123903 124148 . + . GCA_005502385.1_01883_gene GCA_005502385.1_01883 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MQETYVSISQSDLRNLILKASKVEKLTIQLEHANNQLENALEYISELHKQNDDKSKNIADLEVNYKTLETNYNEVISYKAN . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 123903 124148 . + . GCA_005502385.1_01883_mRNA GCA_005502385.1_01883 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MQETYVSISQSDLRNLILKASKVEKLTIQLEHANNQLENALEYISELHKQNDDKSKNIADLEVNYKTLETNYNEVISYKAN . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 123903 124148 . + 0 GCA_005502385.1_01883 GCA_005502385.1_01883_gene,GCA_005502385.1_01883_mRNA GCA_005502385.1_01883 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MQETYVSISQSDLRNLILKASKVEKLTIQLEHANNQLENALEYISELHKQNDDKSKNIADLEVNYKTLETNYNEVISYKAN cloud 81 hypothetical protein WP_137689659.1 UPI0010FA093E UniRef100_UPI0010FA093E,UniRef50_A0A2H4JE25,UniRef90_A0A2H4JE25 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 124166 124573 . + . GCA_005502385.1_01884_gene GCA_005502385.1_01884 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MINRATLVGRLTKDPEYRVTPSGVAVATFTLAINRTFTNANGEREADFINCVVFRRQAENVNKFLFKGYANGGKLNTSNAEEVTEKHIEKEVKKEKAKQEVLPTGWKKNRHKTYYKAQKCSFINGNQPIQAVRSD . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 124166 124573 . + . GCA_005502385.1_01884_mRNA GCA_005502385.1_01884 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MINRATLVGRLTKDPEYRVTPSGVAVATFTLAINRTFTNANGEREADFINCVVFRRQAENVNKFLFKGYANGGKLNTSNAEEVTEKHIEKEVKKEKAKQEVLPTGWKKNRHKTYYKAQKCSFINGNQPIQAVRSD . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 124166 124573 . + 0 GCA_005502385.1_01884 GCA_005502385.1_01884_gene,GCA_005502385.1_01884_mRNA GCA_005502385.1_01884 Single-stranded DNA-binding protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MINRATLVGRLTKDPEYRVTPSGVAVATFTLAINRTFTNANGEREADFINCVVFRRQAENVNKFLFKGYANGGKLNTSNAEEVTEKHIEKEVKKEKAKQEVLPTGWKKNRHKTYYKAQKCSFINGNQPIQAVRSD cloud 135 single-stranded DNA-binding protein WP_170999986.1 UPI0014854F9C UniRef100_UPI0014854F9C,UniRef50_UPI0014854F9C,UniRef90_UPI0014854F9C . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 124570 124758 . + . GCA_005502385.1_01885_gene GCA_005502385.1_01885 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKNNAAGDLPPNTKIEYDEVMMQDKHVWVGYDSYEGDRIYLPVGTRNGKNPLKTKSNKYGQL . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 124570 124758 . + . GCA_005502385.1_01885_mRNA GCA_005502385.1_01885 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKNNAAGDLPPNTKIEYDEVMMQDKHVWVGYDSYEGDRIYLPVGTRNGKNPLKTKSNKYGQL . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 124570 124758 . + 0 GCA_005502385.1_01885 GCA_005502385.1_01885_gene,GCA_005502385.1_01885_mRNA GCA_005502385.1_01885 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKNNAAGDLPPNTKIEYDEVMMQDKHVWVGYDSYEGDRIYLPVGTRNGKNPLKTKSNKYGQL cloud 62 SH3 domain-containing protein WP_137689660.1 UPI0010F61740 UniRef100_UPI0010F61740,UniRef50_UPI002901FED0,UniRef90_UPI0010F61740 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 124900 125556 . + . GCA_005502385.1_01886_gene GCA_005502385.1_01886 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLLPVECTNCKTNFLEEVYEEIFPYNIETINDKVTKVKFNQFIENCSICNSSLILYSGFYIESKNSFFFLRHESQTLRNNKFQIKNFKKIKIEKNLFYKNGFFEKASIKENNEDLNNIDSSQKKKRPILKMILDIFTILGTITGPVSFFYDVGKDTFPFLNNSDTEILDKYKNKIDYLEKESDILNKKYDFLQNRMDFEENQTEIMREEQRIEREEKY . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 124900 125556 . + . GCA_005502385.1_01886_mRNA GCA_005502385.1_01886 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLLPVECTNCKTNFLEEVYEEIFPYNIETINDKVTKVKFNQFIENCSICNSSLILYSGFYIESKNSFFFLRHESQTLRNNKFQIKNFKKIKIEKNLFYKNGFFEKASIKENNEDLNNIDSSQKKKRPILKMILDIFTILGTITGPVSFFYDVGKDTFPFLNNSDTEILDKYKNKIDYLEKESDILNKKYDFLQNRMDFEENQTEIMREEQRIEREEKY . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 124900 125556 . + 0 GCA_005502385.1_01886 GCA_005502385.1_01886_gene,GCA_005502385.1_01886_mRNA GCA_005502385.1_01886 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLLPVECTNCKTNFLEEVYEEIFPYNIETINDKVTKVKFNQFIENCSICNSSLILYSGFYIESKNSFFFLRHESQTLRNNKFQIKNFKKIKIEKNLFYKNGFFEKASIKENNEDLNNIDSSQKKKRPILKMILDIFTILGTITGPVSFFYDVGKDTFPFLNNSDTEILDKYKNKIDYLEKESDILNKKYDFLQNRMDFEENQTEIMREEQRIEREEKY cloud 218 hypothetical protein WP_137689661.1 UPI0010F568D1 UniRef100_UPI0010F568D1,UniRef50_UPI0010F568D1,UniRef90_UPI0010F568D1 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 125556 125807 . + . GCA_005502385.1_01887_gene GCA_005502385.1_01887 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLDVGNLLILISLIFLIISSIGYKIINKNLEQKNGELILKINEIEKENYKLKKKLKQPIFINETLTEKEIEEIQKIMRGDYKE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 125556 125807 . + . GCA_005502385.1_01887_mRNA GCA_005502385.1_01887 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLDVGNLLILISLIFLIISSIGYKIINKNLEQKNGELILKINEIEKENYKLKKKLKQPIFINETLTEKEIEEIQKIMRGDYKE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 125556 125807 . + 0 GCA_005502385.1_01887 GCA_005502385.1_01887_gene,GCA_005502385.1_01887_mRNA GCA_005502385.1_01887 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLDVGNLLILISLIFLIISSIGYKIINKNLEQKNGELILKINEIEKENYKLKKKLKQPIFINETLTEKEIEEIQKIMRGDYKE cloud 83 hypothetical protein WP_137689662.1 UPI0010F67804 UniRef100_UPI0010F67804,UniRef50_UPI0010F67804,UniRef90_UPI0010F67804 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 126223 126314 . - . GCA_005502385.1_01888_gene GCA_005502385.1_01888 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 126223 126314 . - . GCA_005502385.1_01888_mRNA GCA_005502385.1_01888 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 . . . . . . . GCA_005502385.1|SCOV01000006.1 Aragorn:001002 tRNA 126223 126314 . - . GCA_005502385.1_01888 GCA_005502385.1_01888_gene,GCA_005502385.1_01888_mRNA GCA_005502385.1_01888 tRNA-Ser(gct) GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 126317 126391 . - . GCA_005502385.1_01889_gene GCA_005502385.1_01889 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 126317 126391 . - . GCA_005502385.1_01889_mRNA GCA_005502385.1_01889 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 . . . . . . . GCA_005502385.1|SCOV01000006.1 Aragorn:001002 tRNA 126317 126391 . - . GCA_005502385.1_01889 GCA_005502385.1_01889_gene,GCA_005502385.1_01889_mRNA GCA_005502385.1_01889 tRNA-Asn(gtt) GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 126536 127120 . - . GCA_005502385.1_01890_gene GCA_005502385.1_01890 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTQFNKPPNTIYVIRKGDMVIRPTFDDHQQPNGSEILKFDTSREISPFKTQKIIERSCRFYGNNYLSKKAETQRIAGITSKPPILLTPLFPTYFFPTHSDRLEENIWINMHYISDIKPLKNRKSKIIFANQEALTLNVSFHSLWHQYSNSIFYYYMIDKQARMKSNNPDMPIDYEKTSLNIFEALSHYSLLEDK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 126536 127120 . - . GCA_005502385.1_01890_mRNA GCA_005502385.1_01890 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTQFNKPPNTIYVIRKGDMVIRPTFDDHQQPNGSEILKFDTSREISPFKTQKIIERSCRFYGNNYLSKKAETQRIAGITSKPPILLTPLFPTYFFPTHSDRLEENIWINMHYISDIKPLKNRKSKIIFANQEALTLNVSFHSLWHQYSNSIFYYYMIDKQARMKSNNPDMPIDYEKTSLNIFEALSHYSLLEDK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 126536 127120 . - 0 GCA_005502385.1_01890 GCA_005502385.1_01890_gene,GCA_005502385.1_01890_mRNA GCA_005502385.1_01890 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTQFNKPPNTIYVIRKGDMVIRPTFDDHQQPNGSEILKFDTSREISPFKTQKIIERSCRFYGNNYLSKKAETQRIAGITSKPPILLTPLFPTYFFPTHSDRLEENIWINMHYISDIKPLKNRKSKIIFANQEALTLNVSFHSLWHQYSNSIFYYYMIDKQARMKSNNPDMPIDYEKTSLNIFEALSHYSLLEDK persistent 194 comK Competence protein ComK WP_017175793.1 UPI0002EEC9E6 UniRef100_A0A4V2KX31,UniRef50_Q2FZN9,UniRef90_A0A974QMC2 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 127328 127546 . + . GCA_005502385.1_01891_gene GCA_005502385.1_01891 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MYYNTNVKHTTLEEFVTTVNDLGVELVIDEALRLERKKQLVTLIDEALVNRNEDDFNQYTTELKHLEAFLNE . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 127328 127546 . + . GCA_005502385.1_01891_mRNA GCA_005502385.1_01891 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MYYNTNVKHTTLEEFVTTVNDLGVELVIDEALRLERKKQLVTLIDEALVNRNEDDFNQYTTELKHLEAFLNE . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 127328 127546 . + 0 GCA_005502385.1_01891 GCA_005502385.1_01891_gene,GCA_005502385.1_01891_mRNA GCA_005502385.1_01891 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MYYNTNVKHTTLEEFVTTVNDLGVELVIDEALRLERKKQLVTLIDEALVNRNEDDFNQYTTELKHLEAFLNE persistent 72 IDEAL domain-containing protein WP_002488353.1 UPI00024E211B UniRef100_A0A4Q9WPD5,UniRef50_Q2FZN8,UniRef90_A0A4Q9WPD5 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 127614 127712 . - . GCA_005502385.1_01892_gene GCA_005502385.1_01892 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKNFIKRIVRTIITGYVLKWIKNKIEGNSKRK . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 127614 127712 . - . GCA_005502385.1_01892_mRNA GCA_005502385.1_01892 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKNFIKRIVRTIITGYVLKWIKNKIEGNSKRK . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 127614 127712 . - 0 GCA_005502385.1_01892 GCA_005502385.1_01892_gene,GCA_005502385.1_01892_mRNA GCA_005502385.1_01892 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKNFIKRIVRTIITGYVLKWIKNKIEGNSKRK persistent 32 SAR1012 family small protein WP_017175792.1 UPI00036F4372 UniRef100_A0A8X8GWN2,UniRef50_Q4L542,UniRef90_A0A8X8GWN2 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 127801 128013 . - . GCA_005502385.1_01893_gene GCA_005502385.1_01893 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MRVNKTLYVLCALFLGGVGIHKFYADKVGQGVLHLVFFWTLIPTIVSIIHGIIIIFTTKADNNGYIFIPR . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 127801 128013 . - . GCA_005502385.1_01893_mRNA GCA_005502385.1_01893 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MRVNKTLYVLCALFLGGVGIHKFYADKVGQGVLHLVFFWTLIPTIVSIIHGIIIIFTTKADNNGYIFIPR . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 127801 128013 . - 0 GCA_005502385.1_01893 GCA_005502385.1_01893_gene,GCA_005502385.1_01893_mRNA GCA_005502385.1_01893 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MRVNKTLYVLCALFLGGVGIHKFYADKVGQGVLHLVFFWTLIPTIVSIIHGIIIIFTTKADNNGYIFIPR persistent 70 TM2 domain-containing protein WP_017175791.1 UPI0002D4EE2A UniRef100_A0A8X8GPX5,UniRef50_G5JHB1,UniRef90_A0A974KWI6 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 128157 128708 . + . GCA_005502385.1_01894_gene GCA_005502385.1_01894 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIRKATPSDNKQIAKLYYLIWKDMELDIVKEISKKRMINLLELSIVNVHYRTYYKNIWVYEKNNEVAGCIIAYDGSKEMEYEEQWNQLPLEEDIRLVGTPLPIKEAKNDEWYIEAVVTSPDYRGQGIATQLLEHLITTSFNKKWSLNCDYNNEKALKLYKQLGFKWVEDINLYGHDYLHMIYI . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 128157 128708 . + . GCA_005502385.1_01894_mRNA GCA_005502385.1_01894 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIRKATPSDNKQIAKLYYLIWKDMELDIVKEISKKRMINLLELSIVNVHYRTYYKNIWVYEKNNEVAGCIIAYDGSKEMEYEEQWNQLPLEEDIRLVGTPLPIKEAKNDEWYIEAVVTSPDYRGQGIATQLLEHLITTSFNKKWSLNCDYNNEKALKLYKQLGFKWVEDINLYGHDYLHMIYI . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 128157 128708 . + 0 GCA_005502385.1_01894 GCA_005502385.1_01894_gene,GCA_005502385.1_01894_mRNA GCA_005502385.1_01894 hypothetical protein """""" GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MIRKATPSDNKQIAKLYYLIWKDMELDIVKEISKKRMINLLELSIVNVHYRTYYKNIWVYEKNNEVAGCIIAYDGSKEMEYEEQWNQLPLEEDIRLVGTPLPIKEAKNDEWYIEAVVTSPDYRGQGIATQLLEHLITTSFNKKWSLNCDYNNEKALKLYKQLGFKWVEDINLYGHDYLHMIYI persistent 183 N-acetyltransferase WP_017175790.1 UPI0002ED61F6 UniRef100_A0A8X8GI35,UniRef50_A0A6V7R937,UniRef90_A0A974QMN1 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 128756 129694 . - . GCA_005502385.1_01895_gene GCA_005502385.1_01895 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MADQYQQYSTVRKYWHLMRPHTLTASIVPVLVGTATAKLFLLGSQDHIKFSLFLAMLIACLLIQAATNMFNEYYDFKKGLDDHTSVGIGGAIVRNGMSPKLVMNLAIAFYIIAALLGIYLAVNSSFWIIPVGIVCMAIGYLYTGGPIPISWTPFGELFSGLFMGMIIILLAFFIQTGNVNGFVVWISLPIVITIGLINMANNIRDRVKDKASGRKTLSILLGKKASITFMAAMYILAYLIVIFTALFKSGGSLFYLLVLFSFPMPIKAIRRFNKNDTPASMMPAMAATGKTNTVFGILYALGIYISALLGGI . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 128756 129694 . - . GCA_005502385.1_01895_mRNA GCA_005502385.1_01895 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MADQYQQYSTVRKYWHLMRPHTLTASIVPVLVGTATAKLFLLGSQDHIKFSLFLAMLIACLLIQAATNMFNEYYDFKKGLDDHTSVGIGGAIVRNGMSPKLVMNLAIAFYIIAALLGIYLAVNSSFWIIPVGIVCMAIGYLYTGGPIPISWTPFGELFSGLFMGMIIILLAFFIQTGNVNGFVVWISLPIVITIGLINMANNIRDRVKDKASGRKTLSILLGKKASITFMAAMYILAYLIVIFTALFKSGGSLFYLLVLFSFPMPIKAIRRFNKNDTPASMMPAMAATGKTNTVFGILYALGIYISALLGGI . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 128756 129694 . - 0 GCA_005502385.1_01895 GCA_005502385.1_01895_gene,GCA_005502385.1_01895_mRNA GCA_005502385.1_01895 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MADQYQQYSTVRKYWHLMRPHTLTASIVPVLVGTATAKLFLLGSQDHIKFSLFLAMLIACLLIQAATNMFNEYYDFKKGLDDHTSVGIGGAIVRNGMSPKLVMNLAIAFYIIAALLGIYLAVNSSFWIIPVGIVCMAIGYLYTGGPIPISWTPFGELFSGLFMGMIIILLAFFIQTGNVNGFVVWISLPIVITIGLINMANNIRDRVKDKASGRKTLSILLGKKASITFMAAMYILAYLIVIFTALFKSGGSLFYLLVLFSFPMPIKAIRRFNKNDTPASMMPAMAATGKTNTVFGILYALGIYISALLGGI persistent 312 menA 1,4-dihydroxy-2-naphthoate polyprenyltransferase 2.5.1.74 COG1575,H WP_019835346.1 UPI00037C83F6 UniRef100_UPI00037C83F6,UniRef50_Q2FZM0,UniRef90_A0A2A1K7Z5 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 129875 131242 . + . GCA_005502385.1_01896_gene GCA_005502385.1_01896 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAANLMEDKIMESIYESNKNWVSVEVVLNKSLTPSELFNLTEKQAGDRFYLRLNDNMSSFFGYHAIQRFKNNFENKQSIFREWEKFKNDVELIHVNTQKHHLKIVGGFQFSNHKSDDEWREFGINHFVVPEVLISSVNNQTILTYTVEKAQFEMEKLNQIINYFENTQVDTTERETALGNVTRMEDIYVDEWKDLVSHTIEQLDKDQKVVLARRRLIKFDKPISIPYVLNRALNNEKNSYLFILESNQSVFFSQTPEQLLKVEDGVLSTKAVAGTIPRTQDAEKDEKNVQAFLQDSKNLGEHQFVVRSILNDIEPYVENVEYNQKPNILKNDHMYHLYTEIKGTLLNHSYISLIDELHPTPALGGYPKKEAVDYIEKNEFGTRGLYGSPVGYIDVDDDCEFIVAIRSMLIKQNQTTLFAGCGIVKDSNAESEVEETSVKFSPMMNALGVVNENES . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 129875 131242 . + . GCA_005502385.1_01896_mRNA GCA_005502385.1_01896 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAANLMEDKIMESIYESNKNWVSVEVVLNKSLTPSELFNLTEKQAGDRFYLRLNDNMSSFFGYHAIQRFKNNFENKQSIFREWEKFKNDVELIHVNTQKHHLKIVGGFQFSNHKSDDEWREFGINHFVVPEVLISSVNNQTILTYTVEKAQFEMEKLNQIINYFENTQVDTTERETALGNVTRMEDIYVDEWKDLVSHTIEQLDKDQKVVLARRRLIKFDKPISIPYVLNRALNNEKNSYLFILESNQSVFFSQTPEQLLKVEDGVLSTKAVAGTIPRTQDAEKDEKNVQAFLQDSKNLGEHQFVVRSILNDIEPYVENVEYNQKPNILKNDHMYHLYTEIKGTLLNHSYISLIDELHPTPALGGYPKKEAVDYIEKNEFGTRGLYGSPVGYIDVDDDCEFIVAIRSMLIKQNQTTLFAGCGIVKDSNAESEVEETSVKFSPMMNALGVVNENES . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 129875 131242 . + 0 GCA_005502385.1_01896 GCA_005502385.1_01896_gene,GCA_005502385.1_01896_mRNA GCA_005502385.1_01896 Salicylate biosynthesis isochorismate synthase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MAANLMEDKIMESIYESNKNWVSVEVVLNKSLTPSELFNLTEKQAGDRFYLRLNDNMSSFFGYHAIQRFKNNFENKQSIFREWEKFKNDVELIHVNTQKHHLKIVGGFQFSNHKSDDEWREFGINHFVVPEVLISSVNNQTILTYTVEKAQFEMEKLNQIINYFENTQVDTTERETALGNVTRMEDIYVDEWKDLVSHTIEQLDKDQKVVLARRRLIKFDKPISIPYVLNRALNNEKNSYLFILESNQSVFFSQTPEQLLKVEDGVLSTKAVAGTIPRTQDAEKDEKNVQAFLQDSKNLGEHQFVVRSILNDIEPYVENVEYNQKPNILKNDHMYHLYTEIKGTLLNHSYISLIDELHPTPALGGYPKKEAVDYIEKNEFGTRGLYGSPVGYIDVDDDCEFIVAIRSMLIKQNQTTLFAGCGIVKDSNAESEVEETSVKFSPMMNALGVVNENES persistent 455 isochorismate synthase WP_017175788.1 UPI0002F873E8 UniRef100_A0A3S7GT86,UniRef50_A0A6K1LZM7,UniRef90_A0A3S7GT86 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 131226 132902 . + . GCA_005502385.1_01897_gene GCA_005502385.1_01897 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MRMNHKEALTKQVYTFASELYAYGVREVVISPGSRSTPLAIAFEAHPNIKTWIHPDERSAAFFALGLIKGSERPVAILCTSGTAAANYTPAIAESQISRIPLIVLTSDRPHELRSVGAPQAINQVNMFANYINFQFDMPVADGSQEMLNTINYQMQIASQYLYGPHRGPIHFNLPFREPLTPDLEMTENLKSEHKILPHYQKNIDIQDIKNVLKDKKGLIIVGDMQHQAVDQILTYATIHDLPILADPLSQLRKFNHPNVITTYDLLYRSHLNIDADFIIRVGKPVISKKLNQWLTRTNAFQILVQNNDKIDVFPTPPHISYEISANDFFRSLVNEPTVNRKDWIERWQSIEAQSRKAITQHMSQATDESAFVSTLIQKLTKDDALFVSNSMPIRDVDNLLFDSEVEVYANRGANGIDGVISTALGMAVHKRVTLLIGDLAFYHDMNGLLMAKLNDIHINIVILNNDGGGIFSYLPQKTAAEQYFERLFGTPTGLNFEYTAMLYDFSFKRLNNITDFSQVSFSNMNSYIYEMITNREDNLEQHQLLYQKLSEILNVTL . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 131226 132902 . + . GCA_005502385.1_01897_mRNA GCA_005502385.1_01897 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MRMNHKEALTKQVYTFASELYAYGVREVVISPGSRSTPLAIAFEAHPNIKTWIHPDERSAAFFALGLIKGSERPVAILCTSGTAAANYTPAIAESQISRIPLIVLTSDRPHELRSVGAPQAINQVNMFANYINFQFDMPVADGSQEMLNTINYQMQIASQYLYGPHRGPIHFNLPFREPLTPDLEMTENLKSEHKILPHYQKNIDIQDIKNVLKDKKGLIIVGDMQHQAVDQILTYATIHDLPILADPLSQLRKFNHPNVITTYDLLYRSHLNIDADFIIRVGKPVISKKLNQWLTRTNAFQILVQNNDKIDVFPTPPHISYEISANDFFRSLVNEPTVNRKDWIERWQSIEAQSRKAITQHMSQATDESAFVSTLIQKLTKDDALFVSNSMPIRDVDNLLFDSEVEVYANRGANGIDGVISTALGMAVHKRVTLLIGDLAFYHDMNGLLMAKLNDIHINIVILNNDGGGIFSYLPQKTAAEQYFERLFGTPTGLNFEYTAMLYDFSFKRLNNITDFSQVSFSNMNSYIYEMITNREDNLEQHQLLYQKLSEILNVTL . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 131226 132902 . + 0 GCA_005502385.1_01897 GCA_005502385.1_01897_gene,GCA_005502385.1_01897_mRNA GCA_005502385.1_01897 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MRMNHKEALTKQVYTFASELYAYGVREVVISPGSRSTPLAIAFEAHPNIKTWIHPDERSAAFFALGLIKGSERPVAILCTSGTAAANYTPAIAESQISRIPLIVLTSDRPHELRSVGAPQAINQVNMFANYINFQFDMPVADGSQEMLNTINYQMQIASQYLYGPHRGPIHFNLPFREPLTPDLEMTENLKSEHKILPHYQKNIDIQDIKNVLKDKKGLIIVGDMQHQAVDQILTYATIHDLPILADPLSQLRKFNHPNVITTYDLLYRSHLNIDADFIIRVGKPVISKKLNQWLTRTNAFQILVQNNDKIDVFPTPPHISYEISANDFFRSLVNEPTVNRKDWIERWQSIEAQSRKAITQHMSQATDESAFVSTLIQKLTKDDALFVSNSMPIRDVDNLLFDSEVEVYANRGANGIDGVISTALGMAVHKRVTLLIGDLAFYHDMNGLLMAKLNDIHINIVILNNDGGGIFSYLPQKTAAEQYFERLFGTPTGLNFEYTAMLYDFSFKRLNNITDFSQVSFSNMNSYIYEMITNREDNLEQHQLLYQKLSEILNVTL persistent 558 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 2.2.1.9 GO:0009234,GO:0030976,GO:0070204 UniRef50_Q8CPQ5,UniRef90_A0A8X8KI82 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 132889 133692 . + . GCA_005502385.1_01898_gene GCA_005502385.1_01898 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLHYNFYKSDHPSNQLLILLHGFISDSQTYMNHIEAFLTQCNILTIDLPGHGKDDSPIDQTWDFPYITEQINRVLSQFEKYKFSLLGYSMGGRVALYYTIYGQYEIKQLILESTSPGIADEALRKERQAIDQARGRVLEIAGIEVFVNDWEKLPLFQTQYLLDDNKKQAMRRMRLSQDPNKLAKALRDYGTGHMPNLWGDIKRIKSDCLILAGELDEKFVNTAKKMAQEIKNYQIRILKNVGHTIHVEDEAEFDTIVLGFLKEEQND . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 132889 133692 . + . GCA_005502385.1_01898_mRNA GCA_005502385.1_01898 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLHYNFYKSDHPSNQLLILLHGFISDSQTYMNHIEAFLTQCNILTIDLPGHGKDDSPIDQTWDFPYITEQINRVLSQFEKYKFSLLGYSMGGRVALYYTIYGQYEIKQLILESTSPGIADEALRKERQAIDQARGRVLEIAGIEVFVNDWEKLPLFQTQYLLDDNKKQAMRRMRLSQDPNKLAKALRDYGTGHMPNLWGDIKRIKSDCLILAGELDEKFVNTAKKMAQEIKNYQIRILKNVGHTIHVEDEAEFDTIVLGFLKEEQND . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 132889 133692 . + 0 GCA_005502385.1_01898 GCA_005502385.1_01898_gene,GCA_005502385.1_01898_mRNA GCA_005502385.1_01898 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MLHYNFYKSDHPSNQLLILLHGFISDSQTYMNHIEAFLTQCNILTIDLPGHGKDDSPIDQTWDFPYITEQINRVLSQFEKYKFSLLGYSMGGRVALYYTIYGQYEIKQLILESTSPGIADEALRKERQAIDQARGRVLEIAGIEVFVNDWEKLPLFQTQYLLDDNKKQAMRRMRLSQDPNKLAKALRDYGTGHMPNLWGDIKRIKSDCLILAGELDEKFVNTAKKMAQEIKNYQIRILKNVGHTIHVEDEAEFDTIVLGFLKEEQND persistent 267 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 4.2.99.20 GO:0009234,GO:0070205 WP_054105421.1 UPI0006B99429 UniRef100_UPI0006B99429,UniRef50_A0A380H942,UniRef90_A0A3S7GX22 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 133685 134503 . + . GCA_005502385.1_01899_gene GCA_005502385.1_01899 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTRQWETLKEYDEIKYEFFEGIAKVTINRPEVRNAFTPKTVAEMIDAFTRARDDQNVSVIILTGEGDKAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRVIPKPVIAMVRGYAIGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALEMGLVNTVVPLDKVEDETVAWCKDIMKHSPTALRFLKAAMNADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 133685 134503 . + . GCA_005502385.1_01899_mRNA GCA_005502385.1_01899 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTRQWETLKEYDEIKYEFFEGIAKVTINRPEVRNAFTPKTVAEMIDAFTRARDDQNVSVIILTGEGDKAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRVIPKPVIAMVRGYAIGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALEMGLVNTVVPLDKVEDETVAWCKDIMKHSPTALRFLKAAMNADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 133685 134503 . + 0 GCA_005502385.1_01899 GCA_005502385.1_01899_gene,GCA_005502385.1_01899_mRNA GCA_005502385.1_01899 1%2C4-dihydroxy-2-naphthoyl-CoA synthase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MTRQWETLKEYDEIKYEFFEGIAKVTINRPEVRNAFTPKTVAEMIDAFTRARDDQNVSVIILTGEGDKAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRVIPKPVIAMVRGYAIGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALEMGLVNTVVPLDKVEDETVAWCKDIMKHSPTALRFLKAAMNADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP persistent 272 menB 1,4-dihydroxy-2-naphthoyl-CoA synthase 4.1.3.36 GO:0005829,GO:0008935,GO:0009234 COG0447,H WP_002448062.1 UPI00019FC874 UniRef100_A0A1L8Y6N4,UniRef50_Q5HH38,UniRef90_Q5HH38 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 134555 135730 . - . GCA_005502385.1_01900_gene GCA_005502385.1_01900 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKLTLNSNSKFLRAPSIRQFSSRIKNIDDCVNLTIGQPDFPMPDVVKQAYINAISEDKTSYSHNKGLTETRQAISQYFKRRYGFFYSEEEIIVTNGASEALDTSLRSIIEPGDEILIPGPIYAGYIPLVETLGGKPIYIDTTHSDFKVTPELIETYFTNQTKAILLNYPTNPTGVILERSEVEALVHYLKTKEIFIISDEIYAENTFTGTHTSFAEYEEIRDQLLLIGGLSKSHSATGIRIGFLIGPEYLIEKLTFMHAYNCICANVPAQIACITALNEGLEAPKYMNEAYIERRDYLKAKLLSLGFELEAQPEGAFYIFPSIKRFTNNDFDFCVNVLEEAHVAMVPGSSFTDIGKGYIRISYAYEMNVLKEGMRRLELYLKEHYPNVLDN . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 134555 135730 . - . GCA_005502385.1_01900_mRNA GCA_005502385.1_01900 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKLTLNSNSKFLRAPSIRQFSSRIKNIDDCVNLTIGQPDFPMPDVVKQAYINAISEDKTSYSHNKGLTETRQAISQYFKRRYGFFYSEEEIIVTNGASEALDTSLRSIIEPGDEILIPGPIYAGYIPLVETLGGKPIYIDTTHSDFKVTPELIETYFTNQTKAILLNYPTNPTGVILERSEVEALVHYLKTKEIFIISDEIYAENTFTGTHTSFAEYEEIRDQLLLIGGLSKSHSATGIRIGFLIGPEYLIEKLTFMHAYNCICANVPAQIACITALNEGLEAPKYMNEAYIERRDYLKAKLLSLGFELEAQPEGAFYIFPSIKRFTNNDFDFCVNVLEEAHVAMVPGSSFTDIGKGYIRISYAYEMNVLKEGMRRLELYLKEHYPNVLDN . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 134555 135730 . - 0 GCA_005502385.1_01900 GCA_005502385.1_01900_gene,GCA_005502385.1_01900_mRNA GCA_005502385.1_01900 putative N-acetyl-LL-diaminopimelate aminotransferase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKLTLNSNSKFLRAPSIRQFSSRIKNIDDCVNLTIGQPDFPMPDVVKQAYINAISEDKTSYSHNKGLTETRQAISQYFKRRYGFFYSEEEIIVTNGASEALDTSLRSIIEPGDEILIPGPIYAGYIPLVETLGGKPIYIDTTHSDFKVTPELIETYFTNQTKAILLNYPTNPTGVILERSEVEALVHYLKTKEIFIISDEIYAENTFTGTHTSFAEYEEIRDQLLLIGGLSKSHSATGIRIGFLIGPEYLIEKLTFMHAYNCICANVPAQIACITALNEGLEAPKYMNEAYIERRDYLKAKLLSLGFELEAQPEGAFYIFPSIKRFTNNDFDFCVNVLEEAHVAMVPGSSFTDIGKGYIRISYAYEMNVLKEGMRRLELYLKEHYPNVLDN persistent 391 Aminotransferase 2.6.1.- WP_019835348.1 UPI00036073A8 UniRef100_UPI00036073A8,UniRef50_Q4L550,UniRef90_A0A3S7GT02 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 135999 136418 . + . GCA_005502385.1_01901_gene GCA_005502385.1_01901 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MYNQLEKLITLTNNDLNLVNRRFGQRTDITNDQLELLRILYNYDRLSQYDLTMKISREQSIVSRWIKKLVHKGYITSQQSHEDLRCKDLCLTTEARDLIKQINIARCELIEARCQCLTEEEINNLNHLLNKLNSRHLYI . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 135999 136418 . + . GCA_005502385.1_01901_mRNA GCA_005502385.1_01901 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MYNQLEKLITLTNNDLNLVNRRFGQRTDITNDQLELLRILYNYDRLSQYDLTMKISREQSIVSRWIKKLVHKGYITSQQSHEDLRCKDLCLTTEARDLIKQINIARCELIEARCQCLTEEEINNLNHLLNKLNSRHLYI . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 135999 136418 . + 0 GCA_005502385.1_01901 GCA_005502385.1_01901_gene,GCA_005502385.1_01901_mRNA GCA_005502385.1_01901 Transcriptional regulator SlyA GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MYNQLEKLITLTNNDLNLVNRRFGQRTDITNDQLELLRILYNYDRLSQYDLTMKISREQSIVSRWIKKLVHKGYITSQQSHEDLRCKDLCLTTEARDLIKQINIARCELIEARCQCLTEEEINNLNHLLNKLNSRHLYI persistent 139 marR ATL autolysin transcription regulator COG1846,K WP_002448073.1 UPI00019FC876 UniRef100_A0A1L8Y6M3,UniRef50_Q2FZK9,UniRef90_A0A380G275 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 136595 140635 . - . GCA_005502385.1_01902_gene GCA_005502385.1_01902 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSKKFSFKFPSMIALTLFGAAFTTHHAEASENKQEAANNVIDDQQNIENANVAKHQVSNAAQNISGVQTYQDPTLVKSNTTNNTYTYDAKLDHLNQSASSQNNSTRSNTNDTLKNNDTISNYQSDNTKHNNNEVATTSTTSTDSTKLVTSAESNNKINSNHVTTETQPTHNESAQVSNTQKLNTDEPKTTLNNVDSQNNSISKTQSSTTFVNNKQQKVDDDTTTTNNDNNKVSTSSTSTTESDSTSNNLSNKSDNTTVNNEDTTLQNNNTQTSPMHNTLKVRAYSAALNNTNVNNKTTTSTQSNDASVSDSTSSVYKGIGGKGGPATVSTYSTTSSLPKYVPQVKSSINNYIRSNNLKAPSIEEHYTSYFPKYGYRNGVGKPEGIVVHDTANDNSTIEGEINYMRNNYTNAFVHAFVDGNRIIETAPTDYLSWGAGPYGNNRFINVEIVHTHDYASFARSMNNYADYAATQLQYYGLKPDSAEYDAKGTVWTHYAISRYLGGTDHADPHAYLSNHNYSYDELYDLINEKYLIKMGKVAPWGTTSTNNSTPTTKPSVNNKKLTVTSNNGLAQIKSDNSGLYTTVYDSKGKTTNQVHNTLTVTKSAQLGKDKYYLVSDYNSGKLYGWVKQSETIYNTTTSKTKVNKSYTIKPGTTLYTVPWGNYNQIAGTVSKSNQSPFKASASQQVGKSTYVYGSVNGLTGWVSKYYLNDIQNKADTTNVLNVSQLNNTLGQVAKKNSGAYTTVYDSSGKINPSINGNTYRVTKKATLNNKNFYLISDFNGNQSHGWIPSSEINIQTTTPINDGIKNYNIKGNSNIYETPWGSSSQIKATVPSKGDVLKSIDALKVGSNTYLHGVINNVWGWILSDDVQTVKTSQKTSSVQTVSKIAQVNSTNDGIRSSIYDASGKHAKQYANKTYVVTKEKKLDDNTYVLLSSTSGNTPLGWYNVKDLNIKNLDKEQKVKGTYTVNQNNKGLYTIAWGTNQQRLDKNNIANQTFTASKSTIVDGKTYLYGTVNNQTGWIALNDLTNASSFDTVEDYNDDLVITNGNSFYYDDPTSAKGYLLKPFNEQIFQVTKRKVVNGITWYYGKLSNGKSVWIKKSDLQQQLVKLSKNYRTLDDVTKIQQNVYGAPPQVQRNNSGWSNATYSEIKNAMNAKTLAKHPTLKYQFLRLDRPQSLSVDRLNRLLKGKGMLENQGQAFANAAKLTGVNEIYLIAHALLETGNGQSKLAKGANLVNNQVVSNSPIKYYNVYGIGAYDYAPLVNGINYAKRSGWNSISKAIIDGAKFIAQDYIKSGQNTLYKMRWNPDQPGTHQYATDINWANVNAEGLKYLYDQINSVGKYFEIPVFNQ . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 136595 140635 . - . GCA_005502385.1_01902_mRNA GCA_005502385.1_01902 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSKKFSFKFPSMIALTLFGAAFTTHHAEASENKQEAANNVIDDQQNIENANVAKHQVSNAAQNISGVQTYQDPTLVKSNTTNNTYTYDAKLDHLNQSASSQNNSTRSNTNDTLKNNDTISNYQSDNTKHNNNEVATTSTTSTDSTKLVTSAESNNKINSNHVTTETQPTHNESAQVSNTQKLNTDEPKTTLNNVDSQNNSISKTQSSTTFVNNKQQKVDDDTTTTNNDNNKVSTSSTSTTESDSTSNNLSNKSDNTTVNNEDTTLQNNNTQTSPMHNTLKVRAYSAALNNTNVNNKTTTSTQSNDASVSDSTSSVYKGIGGKGGPATVSTYSTTSSLPKYVPQVKSSINNYIRSNNLKAPSIEEHYTSYFPKYGYRNGVGKPEGIVVHDTANDNSTIEGEINYMRNNYTNAFVHAFVDGNRIIETAPTDYLSWGAGPYGNNRFINVEIVHTHDYASFARSMNNYADYAATQLQYYGLKPDSAEYDAKGTVWTHYAISRYLGGTDHADPHAYLSNHNYSYDELYDLINEKYLIKMGKVAPWGTTSTNNSTPTTKPSVNNKKLTVTSNNGLAQIKSDNSGLYTTVYDSKGKTTNQVHNTLTVTKSAQLGKDKYYLVSDYNSGKLYGWVKQSETIYNTTTSKTKVNKSYTIKPGTTLYTVPWGNYNQIAGTVSKSNQSPFKASASQQVGKSTYVYGSVNGLTGWVSKYYLNDIQNKADTTNVLNVSQLNNTLGQVAKKNSGAYTTVYDSSGKINPSINGNTYRVTKKATLNNKNFYLISDFNGNQSHGWIPSSEINIQTTTPINDGIKNYNIKGNSNIYETPWGSSSQIKATVPSKGDVLKSIDALKVGSNTYLHGVINNVWGWILSDDVQTVKTSQKTSSVQTVSKIAQVNSTNDGIRSSIYDASGKHAKQYANKTYVVTKEKKLDDNTYVLLSSTSGNTPLGWYNVKDLNIKNLDKEQKVKGTYTVNQNNKGLYTIAWGTNQQRLDKNNIANQTFTASKSTIVDGKTYLYGTVNNQTGWIALNDLTNASSFDTVEDYNDDLVITNGNSFYYDDPTSAKGYLLKPFNEQIFQVTKRKVVNGITWYYGKLSNGKSVWIKKSDLQQQLVKLSKNYRTLDDVTKIQQNVYGAPPQVQRNNSGWSNATYSEIKNAMNAKTLAKHPTLKYQFLRLDRPQSLSVDRLNRLLKGKGMLENQGQAFANAAKLTGVNEIYLIAHALLETGNGQSKLAKGANLVNNQVVSNSPIKYYNVYGIGAYDYAPLVNGINYAKRSGWNSISKAIIDGAKFIAQDYIKSGQNTLYKMRWNPDQPGTHQYATDINWANVNAEGLKYLYDQINSVGKYFEIPVFNQ . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 136595 140635 . - 0 GCA_005502385.1_01902 GCA_005502385.1_01902_gene,GCA_005502385.1_01902_mRNA GCA_005502385.1_01902 Bifunctional autolysin GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSKKFSFKFPSMIALTLFGAAFTTHHAEASENKQEAANNVIDDQQNIENANVAKHQVSNAAQNISGVQTYQDPTLVKSNTTNNTYTYDAKLDHLNQSASSQNNSTRSNTNDTLKNNDTISNYQSDNTKHNNNEVATTSTTSTDSTKLVTSAESNNKINSNHVTTETQPTHNESAQVSNTQKLNTDEPKTTLNNVDSQNNSISKTQSSTTFVNNKQQKVDDDTTTTNNDNNKVSTSSTSTTESDSTSNNLSNKSDNTTVNNEDTTLQNNNTQTSPMHNTLKVRAYSAALNNTNVNNKTTTSTQSNDASVSDSTSSVYKGIGGKGGPATVSTYSTTSSLPKYVPQVKSSINNYIRSNNLKAPSIEEHYTSYFPKYGYRNGVGKPEGIVVHDTANDNSTIEGEINYMRNNYTNAFVHAFVDGNRIIETAPTDYLSWGAGPYGNNRFINVEIVHTHDYASFARSMNNYADYAATQLQYYGLKPDSAEYDAKGTVWTHYAISRYLGGTDHADPHAYLSNHNYSYDELYDLINEKYLIKMGKVAPWGTTSTNNSTPTTKPSVNNKKLTVTSNNGLAQIKSDNSGLYTTVYDSKGKTTNQVHNTLTVTKSAQLGKDKYYLVSDYNSGKLYGWVKQSETIYNTTTSKTKVNKSYTIKPGTTLYTVPWGNYNQIAGTVSKSNQSPFKASASQQVGKSTYVYGSVNGLTGWVSKYYLNDIQNKADTTNVLNVSQLNNTLGQVAKKNSGAYTTVYDSSGKINPSINGNTYRVTKKATLNNKNFYLISDFNGNQSHGWIPSSEINIQTTTPINDGIKNYNIKGNSNIYETPWGSSSQIKATVPSKGDVLKSIDALKVGSNTYLHGVINNVWGWILSDDVQTVKTSQKTSSVQTVSKIAQVNSTNDGIRSSIYDASGKHAKQYANKTYVVTKEKKLDDNTYVLLSSTSGNTPLGWYNVKDLNIKNLDKEQKVKGTYTVNQNNKGLYTIAWGTNQQRLDKNNIANQTFTASKSTIVDGKTYLYGTVNNQTGWIALNDLTNASSFDTVEDYNDDLVITNGNSFYYDDPTSAKGYLLKPFNEQIFQVTKRKVVNGITWYYGKLSNGKSVWIKKSDLQQQLVKLSKNYRTLDDVTKIQQNVYGAPPQVQRNNSGWSNATYSEIKNAMNAKTLAKHPTLKYQFLRLDRPQSLSVDRLNRLLKGKGMLENQGQAFANAAKLTGVNEIYLIAHALLETGNGQSKLAKGANLVNNQVVSNSPIKYYNVYGIGAYDYAPLVNGINYAKRSGWNSISKAIIDGAKFIAQDYIKSGQNTLYKMRWNPDQPGTHQYATDINWANVNAEGLKYLYDQINSVGKYFEIPVFNQ persistent 1346 Bifunctional autolysin WP_137689663.1 UPI0010F7A21A UniRef100_UPI0010F7A21A,UniRef50_P0C5Z8,UniRef90_A0A3S7GWD7 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 140787 141206 . - . GCA_005502385.1_01903_gene GCA_005502385.1_01903 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFREVINQSMLSDCFEIRKSVFVEEQGVPLENELDAFENTSTHIIGYHDNHPFACARFRPYEDGIKVERVAILKPYRNKGFGKTLMNTIESIAKRKHHHKLILNAQLQAKPFYEKLGYVSIGLPFQEENIVHIKMYKII . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 140787 141206 . - . GCA_005502385.1_01903_mRNA GCA_005502385.1_01903 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFREVINQSMLSDCFEIRKSVFVEEQGVPLENELDAFENTSTHIIGYHDNHPFACARFRPYEDGIKVERVAILKPYRNKGFGKTLMNTIESIAKRKHHHKLILNAQLQAKPFYEKLGYVSIGLPFQEENIVHIKMYKII . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 140787 141206 . - 0 GCA_005502385.1_01903 GCA_005502385.1_01903_gene,GCA_005502385.1_01903_mRNA GCA_005502385.1_01903 Acetyltransferase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MFREVINQSMLSDCFEIRKSVFVEEQGVPLENELDAFENTSTHIIGYHDNHPFACARFRPYEDGIKVERVAILKPYRNKGFGKTLMNTIESIAKRKHHHKLILNAQLQAKPFYEKLGYVSIGLPFQEENIVHIKMYKII persistent 139 GCN5-related N-acetyltransferase WP_017175782.1 UPI000308C7B6 UniRef100_A0A4Q9WPE2,UniRef50_Q4L556,UniRef90_A0A4Q9WPE2 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 141324 141794 . - . GCA_005502385.1_01904_gene GCA_005502385.1_01904 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSRKTYEKIANINGMFNVLEQQIIHSQDMALFRSEFFYVNHEHRENYEALLVYYGENSVNPIVNGACYIVALPEIFNKVDVFESDLPFSWVYDENGITETMQSISIPLQYLIAAALEVTDVNLFRPSGFTMGMNNWNIAQLRIFWQYCAIVRQEAL . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 141324 141794 . - . GCA_005502385.1_01904_mRNA GCA_005502385.1_01904 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSRKTYEKIANINGMFNVLEQQIIHSQDMALFRSEFFYVNHEHRENYEALLVYYGENSVNPIVNGACYIVALPEIFNKVDVFESDLPFSWVYDENGITETMQSISIPLQYLIAAALEVTDVNLFRPSGFTMGMNNWNIAQLRIFWQYCAIVRQEAL . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 141324 141794 . - 0 GCA_005502385.1_01904 GCA_005502385.1_01904_gene,GCA_005502385.1_01904_mRNA GCA_005502385.1_01904 hypothetical protein GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSRKTYEKIANINGMFNVLEQQIIHSQDMALFRSEFFYVNHEHRENYEALLVYYGENSVNPIVNGACYIVALPEIFNKVDVFESDLPFSWVYDENGITETMQSISIPLQYLIAAALEVTDVNLFRPSGFTMGMNNWNIAQLRIFWQYCAIVRQEAL persistent 156 DUF2538 domain-containing protein WP_002448219.1 UPI00019FC879 UniRef100_A0A2A1MBM5,UniRef50_P0A0Q4,UniRef90_A0AAE5JJC3 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 141814 143052 . - . GCA_005502385.1_01905_gene GCA_005502385.1_01905 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNRFLKYFMMLLTLLLIVVPVIFIVNLYHHSENALQSSYNKSDAKRHSTLRNSKINPSKNAISILFLGIDDNEGRRKNGQTTEHSRTDSMILATLSPNKQQIRLLSIPRDTISYIPKVGYYDKITHAHAYGGPIATMDTVEATLNVPVDYYVRINMDAFVQAVDKLGGIYYDVPYDLDEPNTDDTGRIKVKKGYHKLNGDEALAVARTRHHDSDLKRGERQMDLIKILFQKAKNLDSYDRLDELVQIVGKNAKHNLTTEEIKSIASIYLSDNIDFKKSQLKGDNDYLNGIYYYHPSIKSILKYSNLLRSDLGLSKITDKNDLLDERVIKHYGNLVPLTPIDSFLLENSQKDTTTDENSIQNNDTNPSTQSQSEQNPSDSTMVQQDQTSNQVNSNNPDNSNDFNNQNEINQLY . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 141814 143052 . - . GCA_005502385.1_01905_mRNA GCA_005502385.1_01905 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNRFLKYFMMLLTLLLIVVPVIFIVNLYHHSENALQSSYNKSDAKRHSTLRNSKINPSKNAISILFLGIDDNEGRRKNGQTTEHSRTDSMILATLSPNKQQIRLLSIPRDTISYIPKVGYYDKITHAHAYGGPIATMDTVEATLNVPVDYYVRINMDAFVQAVDKLGGIYYDVPYDLDEPNTDDTGRIKVKKGYHKLNGDEALAVARTRHHDSDLKRGERQMDLIKILFQKAKNLDSYDRLDELVQIVGKNAKHNLTTEEIKSIASIYLSDNIDFKKSQLKGDNDYLNGIYYYHPSIKSILKYSNLLRSDLGLSKITDKNDLLDERVIKHYGNLVPLTPIDSFLLENSQKDTTTDENSIQNNDTNPSTQSQSEQNPSDSTMVQQDQTSNQVNSNNPDNSNDFNNQNEINQLY . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 141814 143052 . - 0 GCA_005502385.1_01905 GCA_005502385.1_01905_gene,GCA_005502385.1_01905_mRNA GCA_005502385.1_01905 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MNRFLKYFMMLLTLLLIVVPVIFIVNLYHHSENALQSSYNKSDAKRHSTLRNSKINPSKNAISILFLGIDDNEGRRKNGQTTEHSRTDSMILATLSPNKQQIRLLSIPRDTISYIPKVGYYDKITHAHAYGGPIATMDTVEATLNVPVDYYVRINMDAFVQAVDKLGGIYYDVPYDLDEPNTDDTGRIKVKKGYHKLNGDEALAVARTRHHDSDLKRGERQMDLIKILFQKAKNLDSYDRLDELVQIVGKNAKHNLTTEEIKSIASIYLSDNIDFKKSQLKGDNDYLNGIYYYHPSIKSILKYSNLLRSDLGLSKITDKNDLLDERVIKHYGNLVPLTPIDSFLLENSQKDTTTDENSIQNNDTNPSTQSQSEQNPSDSTMVQQDQTSNQVNSNNPDNSNDFNNQNEINQLY persistent 412 Cell envelope-related transcriptional attenuator domain-containing protein 2.7.8.- WP_017175781.1 UPI0002FE7034 UniRef100_A0A3S7GTG9,UniRef50_P52078,UniRef90_A0AAE5JLT2 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 143415 144584 . + . GCA_005502385.1_01906_gene GCA_005502385.1_01906 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKKRIEIITLIIILIILVTLFVIFLMKVYKTNHKDTEYNKINDNKTYLQKRDYHVSKLPHLKIIEVEEPHIKNIDEYLKAIHFNGAVTVLENGKLKLNKGYGYQNFHHKTKNSPNTMYLIGSAQKFTTGLILKKLENENKVNINDSVTKYLPWFETTKKITLKDLMLHRSGLYKFEASPKTKSLDGAVHAIQARGIDEKFYHKHLYNDANYLVLAQVIEVVTHKPYAANYYDDLAQPFSLQHSAFFNEKPYKKYMATGYKMIDGKLTAMKPNILAQYYGAGNLYMTTYDMAHLVNNLKNNNIFSESVSTPLTQQLGTTAYPESYRYGFYVTPQYNRINGVFYGQIFTVYFNQHYVIVLASNIGDNSKVTNENRISYIYHKILNQQSYYQ . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 143415 144584 . + . GCA_005502385.1_01906_mRNA GCA_005502385.1_01906 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKKRIEIITLIIILIILVTLFVIFLMKVYKTNHKDTEYNKINDNKTYLQKRDYHVSKLPHLKIIEVEEPHIKNIDEYLKAIHFNGAVTVLENGKLKLNKGYGYQNFHHKTKNSPNTMYLIGSAQKFTTGLILKKLENENKVNINDSVTKYLPWFETTKKITLKDLMLHRSGLYKFEASPKTKSLDGAVHAIQARGIDEKFYHKHLYNDANYLVLAQVIEVVTHKPYAANYYDDLAQPFSLQHSAFFNEKPYKKYMATGYKMIDGKLTAMKPNILAQYYGAGNLYMTTYDMAHLVNNLKNNNIFSESVSTPLTQQLGTTAYPESYRYGFYVTPQYNRINGVFYGQIFTVYFNQHYVIVLASNIGDNSKVTNENRISYIYHKILNQQSYYQ . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 143415 144584 . + 0 GCA_005502385.1_01906 GCA_005502385.1_01906_gene,GCA_005502385.1_01906_mRNA GCA_005502385.1_01906 Teichoic acid D-alanine hydrolase GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MKKRIEIITLIIILIILVTLFVIFLMKVYKTNHKDTEYNKINDNKTYLQKRDYHVSKLPHLKIIEVEEPHIKNIDEYLKAIHFNGAVTVLENGKLKLNKGYGYQNFHHKTKNSPNTMYLIGSAQKFTTGLILKKLENENKVNINDSVTKYLPWFETTKKITLKDLMLHRSGLYKFEASPKTKSLDGAVHAIQARGIDEKFYHKHLYNDANYLVLAQVIEVVTHKPYAANYYDDLAQPFSLQHSAFFNEKPYKKYMATGYKMIDGKLTAMKPNILAQYYGAGNLYMTTYDMAHLVNNLKNNNIFSESVSTPLTQQLGTTAYPESYRYGFYVTPQYNRINGVFYGQIFTVYFNQHYVIVLASNIGDNSKVTNENRISYIYHKILNQQSYYQ persistent 389 Beta-lactamase family protein WP_048762313.1 UPI00066003DA UniRef100_UPI00066003DA,UniRef50_Q2FZK3,UniRef90_A0A3S7GTJ6 . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka gene 144632 145534 . - . GCA_005502385.1_01907_gene GCA_005502385.1_01907 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSLPIIIDTDPGIDDAAAIALALSHTKFDVKMISTVNGNVGVEKTTANALKLKAFFNSEVPIHRGASQPLISEIQDASHIHGESGMDGYQFPTISTSDLASSHAVEAMNEILSHSNEPITLVTLGPLTNIALLFNTYPECKNHVKEIIMMGGSTGRGNVTPLAEFNIYCDPEAAHIVFNAGLPLTMIGLDLARQSLFTHSYLDTLKDKNNTTQMLYHIFQHYRGEDFKEGIKLYDAFTILYLLDPKSYEIKEADVQIELQGSLTRGATVVDFESSYPNCSVVVSSINEHYKTIFLNTLKN . . . . . . . GCA_005502385.1|SCOV01000006.1 prokka mRNA 144632 145534 . - . GCA_005502385.1_01907_mRNA GCA_005502385.1_01907 GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSLPIIIDTDPGIDDAAAIALALSHTKFDVKMISTVNGNVGVEKTTANALKLKAFFNSEVPIHRGASQPLISEIQDASHIHGESGMDGYQFPTISTSDLASSHAVEAMNEILSHSNEPITLVTLGPLTNIALLFNTYPECKNHVKEIIMMGGSTGRGNVTPLAEFNIYCDPEAAHIVFNAGLPLTMIGLDLARQSLFTHSYLDTLKDKNNTTQMLYHIFQHYRGEDFKEGIKLYDAFTILYLLDPKSYEIKEADVQIELQGSLTRGATVVDFESSYPNCSVVVSSINEHYKTIFLNTLKN . . . . . . . GCA_005502385.1|SCOV01000006.1 Prodigal:002006 CDS 144632 145534 . - 0 GCA_005502385.1_01907 GCA_005502385.1_01907_gene,GCA_005502385.1_01907_mRNA GCA_005502385.1_01907 Non-specific ribonucleoside hydrolase RihC GCA_005502385.1 SCOV01000006.1 GCA_005502385.1|SCOV01000006.1 GCA_005502385.1_SCOV01000006.1 MSLPIIIDTDPGIDDAAAIALALSHTKFDVKMISTVNGNVGVEKTTANALKLKAFFNSEVPIHRGASQPLISEIQDASHIHGESGMDGYQFPTISTSDLASSHAVEAMNEILSHSNEPITLVTLGPLTNIALLFNTYPECKNHVKEIIMMGGSTGRGNVTPLAEFNIYCDPEAAHIVFNAGLPLTMIGLDLARQSLFTHSYLDTLKDKNNTTQMLYHIFQHYRGEDFKEGIKLYDAFTILYLLDPKSYEIKEADVQIELQGSLTRGATVVDFESSYPNCSVVVSSINEHYKTIFLNTLKN persistent 300 rihC ribonucleoside hydrolase RihC 3.2.2.- GO:0016799 WP_017175779.1 UPI0002F99D84 UniRef100_A0A4Q9WU11,UniRef50_Q4L561,UniRef90_A0A4Q9WU11 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 118 1179 . - . GCA_005502385.1_01908_gene GCA_005502385.1_01908 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKTKRISGFQWALTIFVFFVVTMALSLILRDFQASIGIKRFVFSINNLAPFIAAIICIIAFKNKRTQLAGLNFSIDIRVIERIILALILPLIIFIIGMMSFNRFADSFILLQANDLSVSVFTIMIGHIFMAFFAEFGFRSYLQNIVESKVNTFFASIIVGLMYSIWTINTTYGMQYAGYHFLYTFMFSMIVGELIRATKGRTIYIAMLFHAAMTFAQVFLFSEETGDLFSMKVIALSTTIVGIIFILLSLVIRFILYKTTNQSLDEVEPNNYLDHVNDDTDDSNKISNSELDKKETSHQSLQENNVTHTQTNESEVQDGDHHLKSSSKYTEDRRSSVVDNVKEEINDIHKSNK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 118 1179 . - . GCA_005502385.1_01908_mRNA GCA_005502385.1_01908 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKTKRISGFQWALTIFVFFVVTMALSLILRDFQASIGIKRFVFSINNLAPFIAAIICIIAFKNKRTQLAGLNFSIDIRVIERIILALILPLIIFIIGMMSFNRFADSFILLQANDLSVSVFTIMIGHIFMAFFAEFGFRSYLQNIVESKVNTFFASIIVGLMYSIWTINTTYGMQYAGYHFLYTFMFSMIVGELIRATKGRTIYIAMLFHAAMTFAQVFLFSEETGDLFSMKVIALSTTIVGIIFILLSLVIRFILYKTTNQSLDEVEPNNYLDHVNDDTDDSNKISNSELDKKETSHQSLQENNVTHTQTNESEVQDGDHHLKSSSKYTEDRRSSVVDNVKEEINDIHKSNK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 118 1179 . - 0 GCA_005502385.1_01908 GCA_005502385.1_01908_gene,GCA_005502385.1_01908_mRNA GCA_005502385.1_01908 Lysostaphin resistance protein A GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKTKRISGFQWALTIFVFFVVTMALSLILRDFQASIGIKRFVFSINNLAPFIAAIICIIAFKNKRTQLAGLNFSIDIRVIERIILALILPLIIFIIGMMSFNRFADSFILLQANDLSVSVFTIMIGHIFMAFFAEFGFRSYLQNIVESKVNTFFASIIVGLMYSIWTINTTYGMQYAGYHFLYTFMFSMIVGELIRATKGRTIYIAMLFHAAMTFAQVFLFSEETGDLFSMKVIALSTTIVGIIFILLSLVIRFILYKTTNQSLDEVEPNNYLDHVNDDTDDSNKISNSELDKKETSHQSLQENNVTHTQTNESEVQDGDHHLKSSSKYTEDRRSSVVDNVKEEINDIHKSNK persistent 353 CPBP family intramembrane metalloprotease WP_048762124.1 UPI000660A873 UniRef100_UPI000660A873,UniRef50_S2XE87,UniRef90_A0A3S7GW67 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 1436 2371 . + . GCA_005502385.1_01909_gene GCA_005502385.1_01909 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MYSESNPKLWKGRVDSQNDPKQFKHFQTVTFANLEKIENRFDKVGVGLLGYAVDKGIELNEGRIGAKKGPDEIKKAFAQLPDLSECESLVDYGNVEYTKGSLSEVQEEMGHLAARVIQQHHQSFFIGGGHDIAYAQYLATRHTYPDASIGIINIDSHFETRADVQSNSGTMFRQILEKDDNVDYLVLGLSQGRNTRSLYEYAEEKGIIYVYADEILNDLSPTIKDKIERFIHQHETIMFTISMDAIDSAFAPGVSEPTVLGLNPHSVFNIGKRVILSGKTSSISIAEVNPNYDIDHRTAQLAANFIHHFIE . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 1436 2371 . + . GCA_005502385.1_01909_mRNA GCA_005502385.1_01909 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MYSESNPKLWKGRVDSQNDPKQFKHFQTVTFANLEKIENRFDKVGVGLLGYAVDKGIELNEGRIGAKKGPDEIKKAFAQLPDLSECESLVDYGNVEYTKGSLSEVQEEMGHLAARVIQQHHQSFFIGGGHDIAYAQYLATRHTYPDASIGIINIDSHFETRADVQSNSGTMFRQILEKDDNVDYLVLGLSQGRNTRSLYEYAEEKGIIYVYADEILNDLSPTIKDKIERFIHQHETIMFTISMDAIDSAFAPGVSEPTVLGLNPHSVFNIGKRVILSGKTSSISIAEVNPNYDIDHRTAQLAANFIHHFIE . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 1436 2371 . + 0 GCA_005502385.1_01909 GCA_005502385.1_01909_gene,GCA_005502385.1_01909_mRNA GCA_005502385.1_01909 Formimidoylglutamase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MYSESNPKLWKGRVDSQNDPKQFKHFQTVTFANLEKIENRFDKVGVGLLGYAVDKGIELNEGRIGAKKGPDEIKKAFAQLPDLSECESLVDYGNVEYTKGSLSEVQEEMGHLAARVIQQHHQSFFIGGGHDIAYAQYLATRHTYPDASIGIINIDSHFETRADVQSNSGTMFRQILEKDDNVDYLVLGLSQGRNTRSLYEYAEEKGIIYVYADEILNDLSPTIKDKIERFIHQHETIMFTISMDAIDSAFAPGVSEPTVLGLNPHSVFNIGKRVILSGKTSSISIAEVNPNYDIDHRTAQLAANFIHHFIE persistent 311 hutG formimidoylglutamase 3.5.3.8 GO:0019556,GO:0050415 WP_019835632.1 UPI0003622B68 UniRef100_UPI0003622B68,UniRef50_Q2FVT2,UniRef90_A0A3S7GWM2 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 2528 3646 . + . GCA_005502385.1_01910_gene GCA_005502385.1_01910 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTSFNDVVKWRRMFHQYPELSKYEYKTTQRIKDILTSYNIKMIDIPMETGLVAEIGQGEKCIAVRTDIDALPIQEQVSQDFTSTNDGVMHACGHDIHMASILAIATKLKEEEEQLNGRVRFLFQPAEELGYGAKAMAKTNALDDVQAIVGFHNYPTLDIGEFAIKSGPITSAVDRFEFKIHGKGAHAAKPEQGNDPVMALGQLITSLQTIISRNLSAFDSAVITIGEVSSGNTWNVIADNAYVQGTVRSFKPEVQDYIEQRMHDIAKGLEQLFNIEIELIYTRLPGAVINDVELTKHAKEAAKKVGYTVIDLEHPYTIGEDFSGLLEHHPGVFAFIGSNSEYDLHHPKYNPDERILEKTPDYFIELIYQLLA . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 2528 3646 . + . GCA_005502385.1_01910_mRNA GCA_005502385.1_01910 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTSFNDVVKWRRMFHQYPELSKYEYKTTQRIKDILTSYNIKMIDIPMETGLVAEIGQGEKCIAVRTDIDALPIQEQVSQDFTSTNDGVMHACGHDIHMASILAIATKLKEEEEQLNGRVRFLFQPAEELGYGAKAMAKTNALDDVQAIVGFHNYPTLDIGEFAIKSGPITSAVDRFEFKIHGKGAHAAKPEQGNDPVMALGQLITSLQTIISRNLSAFDSAVITIGEVSSGNTWNVIADNAYVQGTVRSFKPEVQDYIEQRMHDIAKGLEQLFNIEIELIYTRLPGAVINDVELTKHAKEAAKKVGYTVIDLEHPYTIGEDFSGLLEHHPGVFAFIGSNSEYDLHHPKYNPDERILEKTPDYFIELIYQLLA . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 2528 3646 . + 0 GCA_005502385.1_01910 GCA_005502385.1_01910_gene,GCA_005502385.1_01910_mRNA GCA_005502385.1_01910 N-acetylcysteine deacetylase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTSFNDVVKWRRMFHQYPELSKYEYKTTQRIKDILTSYNIKMIDIPMETGLVAEIGQGEKCIAVRTDIDALPIQEQVSQDFTSTNDGVMHACGHDIHMASILAIATKLKEEEEQLNGRVRFLFQPAEELGYGAKAMAKTNALDDVQAIVGFHNYPTLDIGEFAIKSGPITSAVDRFEFKIHGKGAHAAKPEQGNDPVMALGQLITSLQTIISRNLSAFDSAVITIGEVSSGNTWNVIADNAYVQGTVRSFKPEVQDYIEQRMHDIAKGLEQLFNIEIELIYTRLPGAVINDVELTKHAKEAAKKVGYTVIDLEHPYTIGEDFSGLLEHHPGVFAFIGSNSEYDLHHPKYNPDERILEKTPDYFIELIYQLLA persistent 372 Amidohydrolase WP_019835631.1 UPI00037DCD5F UniRef100_UPI00037DCD5F,UniRef50_A0A0E7Q410,UniRef90_A0A3S7GWG6 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 3734 4615 . + . GCA_005502385.1_01911_gene GCA_005502385.1_01911 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MGAQDPRTKFKDSDYKKQEQETPGYQYKMSPKPDCGEESYEGHGRLQDYKMLVTGGDSGIGRAAAIAYAKEGADVVLNYLPSEEQDAQEVKEVIEKTGRKAVLIPGDVRNEQFNYDLVEQAYNELGGLDNITLVAGHQQYHDDIHGFTTEQFAETFETNVYPIFWTAQAATKYLKPGASITTTSSVQGYKPAAILHDYAASKAAIISLTKSLSEEFGDKGIRVNSVAPGPFWSPLQISGGQPQSAIPEFGQATPLGRAGQPVECVGPYVLFASEDGSYLTGQVHSVTGGIQID . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 3734 4615 . + . GCA_005502385.1_01911_mRNA GCA_005502385.1_01911 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MGAQDPRTKFKDSDYKKQEQETPGYQYKMSPKPDCGEESYEGHGRLQDYKMLVTGGDSGIGRAAAIAYAKEGADVVLNYLPSEEQDAQEVKEVIEKTGRKAVLIPGDVRNEQFNYDLVEQAYNELGGLDNITLVAGHQQYHDDIHGFTTEQFAETFETNVYPIFWTAQAATKYLKPGASITTTSSVQGYKPAAILHDYAASKAAIISLTKSLSEEFGDKGIRVNSVAPGPFWSPLQISGGQPQSAIPEFGQATPLGRAGQPVECVGPYVLFASEDGSYLTGQVHSVTGGIQID . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 3734 4615 . + 0 GCA_005502385.1_01911 GCA_005502385.1_01911_gene,GCA_005502385.1_01911_mRNA GCA_005502385.1_01911 putative oxidoreductase YghA GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MGAQDPRTKFKDSDYKKQEQETPGYQYKMSPKPDCGEESYEGHGRLQDYKMLVTGGDSGIGRAAAIAYAKEGADVVLNYLPSEEQDAQEVKEVIEKTGRKAVLIPGDVRNEQFNYDLVEQAYNELGGLDNITLVAGHQQYHDDIHGFTTEQFAETFETNVYPIFWTAQAATKYLKPGASITTTSSVQGYKPAAILHDYAASKAAIISLTKSLSEEFGDKGIRVNSVAPGPFWSPLQISGGQPQSAIPEFGQATPLGRAGQPVECVGPYVLFASEDGSYLTGQVHSVTGGIQID persistent 293 SDR family oxidoreductase WP_017174905.1 UPI00031B6790 UniRef100_A0A4V6MZH2,UniRef50_D5DPI1,UniRef90_A0A4V6MZH2 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 4693 5304 . + . GCA_005502385.1_01912_gene GCA_005502385.1_01912 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKGINPNQLSDIQNYKLLSGSVIPRPIAFVTSEDEKGNLNGAPFSFFNVVNNKPPMIAIAAQRSNGKRKDTAINIEKTKEFVVHITDEFNIEDINETAAPLKYEDNELERTSLTLISSSIIQTPAVKEANIRFECKLDQMIQLGTKNDGADLIIGEVVMYHINEDVYFEDSKIDFNQLKPVARLAGNNYSKLGDTFTIKRPES . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 4693 5304 . + . GCA_005502385.1_01912_mRNA GCA_005502385.1_01912 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKGINPNQLSDIQNYKLLSGSVIPRPIAFVTSEDEKGNLNGAPFSFFNVVNNKPPMIAIAAQRSNGKRKDTAINIEKTKEFVVHITDEFNIEDINETAAPLKYEDNELERTSLTLISSSIIQTPAVKEANIRFECKLDQMIQLGTKNDGADLIIGEVVMYHINEDVYFEDSKIDFNQLKPVARLAGNNYSKLGDTFTIKRPES . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 4693 5304 . + 0 GCA_005502385.1_01912 GCA_005502385.1_01912_gene,GCA_005502385.1_01912_mRNA GCA_005502385.1_01912 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKGINPNQLSDIQNYKLLSGSVIPRPIAFVTSEDEKGNLNGAPFSFFNVVNNKPPMIAIAAQRSNGKRKDTAINIEKTKEFVVHITDEFNIEDINETAAPLKYEDNELERTSLTLISSSIIQTPAVKEANIRFECKLDQMIQLGTKNDGADLIIGEVVMYHINEDVYFEDSKIDFNQLKPVARLAGNNYSKLGDTFTIKRPES persistent 203 Flavin reductase like domain-containing protein WP_017174904.1 UPI0002DB4B10 UniRef100_A0A2A1MBM4,UniRef50_F4BMC7,UniRef90_A0AAE5JMS4 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 5401 6693 . + . GCA_005502385.1_01913_gene GCA_005502385.1_01913 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MEEGNKGHAWALLPLVLFIALFLGIGIATGDFSNMPLNVAITITVIVALMMNRKEKFSKKIEIFTQGAGHSNIVLMVFIFILAGAFSTTAEKMGGVTSTVNLGLSLIPQNFIIVGLFIICMFVSISMGTSVGTIAALAPVGFGFSQATDISAMLAMGTVVGGAMFGDNLSMISDTTIAAVRTQKTKMSDKFKVNFWIVLPGAILTIIILFFLTNGVHIDHSKQYDYNLVKVIPYILVLVLAVIGVNVIVVLISGTILSGIIGLIDGSFNWKGLLTAISKGIIGMEDIAIIALLIGGLVGLIQHNGGVEWLLNFVKSKVKSKRGAEFGIASLVSVADIATANNTISIIMSGPLAKNIADEYEVDPRKSASLLDIFAGCFQGLLPYSPQLIAAAGVAGISPFSMLPYCIYSILLGICGILAIVFRFPRLKTK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 5401 6693 . + . GCA_005502385.1_01913_mRNA GCA_005502385.1_01913 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MEEGNKGHAWALLPLVLFIALFLGIGIATGDFSNMPLNVAITITVIVALMMNRKEKFSKKIEIFTQGAGHSNIVLMVFIFILAGAFSTTAEKMGGVTSTVNLGLSLIPQNFIIVGLFIICMFVSISMGTSVGTIAALAPVGFGFSQATDISAMLAMGTVVGGAMFGDNLSMISDTTIAAVRTQKTKMSDKFKVNFWIVLPGAILTIIILFFLTNGVHIDHSKQYDYNLVKVIPYILVLVLAVIGVNVIVVLISGTILSGIIGLIDGSFNWKGLLTAISKGIIGMEDIAIIALLIGGLVGLIQHNGGVEWLLNFVKSKVKSKRGAEFGIASLVSVADIATANNTISIIMSGPLAKNIADEYEVDPRKSASLLDIFAGCFQGLLPYSPQLIAAAGVAGISPFSMLPYCIYSILLGICGILAIVFRFPRLKTK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 5401 6693 . + 0 GCA_005502385.1_01913 GCA_005502385.1_01913_gene,GCA_005502385.1_01913_mRNA GCA_005502385.1_01913 Malate-2H(+)/Na(+)-lactate antiporter GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MEEGNKGHAWALLPLVLFIALFLGIGIATGDFSNMPLNVAITITVIVALMMNRKEKFSKKIEIFTQGAGHSNIVLMVFIFILAGAFSTTAEKMGGVTSTVNLGLSLIPQNFIIVGLFIICMFVSISMGTSVGTIAALAPVGFGFSQATDISAMLAMGTVVGGAMFGDNLSMISDTTIAAVRTQKTKMSDKFKVNFWIVLPGAILTIIILFFLTNGVHIDHSKQYDYNLVKVIPYILVLVLAVIGVNVIVVLISGTILSGIIGLIDGSFNWKGLLTAISKGIIGMEDIAIIALLIGGLVGLIQHNGGVEWLLNFVKSKVKSKRGAEFGIASLVSVADIATANNTISIIMSGPLAKNIADEYEVDPRKSASLLDIFAGCFQGLLPYSPQLIAAAGVAGISPFSMLPYCIYSILLGICGILAIVFRFPRLKTK persistent 430 nhaC Na+/H+ antiporter NhaC family protein WP_017174903.1 UPI0002F2904A UniRef100_A0A4Q9WV41,UniRef50_S2Y9J0,UniRef90_A0A6N0I263 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 6815 7333 . + . GCA_005502385.1_01914_gene GCA_005502385.1_01914 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAKYNVENEQVEIHIERLFKYSPELVYSAWTDINLLKQWFMTSQRTNKLFDADIHEGGQYRIVDARNGKQNVIQGKYEELVSDEYIKMTIGMPELSDSQDVIEVEFEERESGGTQMFFYYQSIVEKERRLTALEYKHKKKEYHDSTAHGLELMFDRMNEVLDQYVEDNDMLL . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 6815 7333 . + . GCA_005502385.1_01914_mRNA GCA_005502385.1_01914 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAKYNVENEQVEIHIERLFKYSPELVYSAWTDINLLKQWFMTSQRTNKLFDADIHEGGQYRIVDARNGKQNVIQGKYEELVSDEYIKMTIGMPELSDSQDVIEVEFEERESGGTQMFFYYQSIVEKERRLTALEYKHKKKEYHDSTAHGLELMFDRMNEVLDQYVEDNDMLL . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 6815 7333 . + 0 GCA_005502385.1_01914 GCA_005502385.1_01914_gene,GCA_005502385.1_01914_mRNA GCA_005502385.1_01914 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAKYNVENEQVEIHIERLFKYSPELVYSAWTDINLLKQWFMTSQRTNKLFDADIHEGGQYRIVDARNGKQNVIQGKYEELVSDEYIKMTIGMPELSDSQDVIEVEFEERESGGTQMFFYYQSIVEKERRLTALEYKHKKKEYHDSTAHGLELMFDRMNEVLDQYVEDNDMLL persistent 172 Activator of Hsp90 ATPase-like ue 1/2-like C-terminal domain-containing protein WP_002448616.1 UPI00019FC18E UniRef100_A0A4Q9WXV5,UniRef50_B9DLU2,UniRef90_A0A974QNY5 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 7391 8152 . - . GCA_005502385.1_01915_gene GCA_005502385.1_01915 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLLDERVNTNFDKLNDNDLHIAHFVNTHIEQCKTLKIQELSQYTHASNATIHRFTRKLGFDGYSDFKSYLKFESQSLHEVPTDSIKQFKQEIETTFTYLERVNFNLITEKIDKATNVYLYGTGRAQKNVAEEAQRILLTMHKNVIVLHDEHEIKMVLNYSNEDDLFFVISLSGETHQLTEITNLLQLRQRYFISVTTMKDNTLAQKANYNVYVSSHTFYLYNDIDYSSFINYHIFFETLLRKYNERKENGELQ . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 7391 8152 . - . GCA_005502385.1_01915_mRNA GCA_005502385.1_01915 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLLDERVNTNFDKLNDNDLHIAHFVNTHIEQCKTLKIQELSQYTHASNATIHRFTRKLGFDGYSDFKSYLKFESQSLHEVPTDSIKQFKQEIETTFTYLERVNFNLITEKIDKATNVYLYGTGRAQKNVAEEAQRILLTMHKNVIVLHDEHEIKMVLNYSNEDDLFFVISLSGETHQLTEITNLLQLRQRYFISVTTMKDNTLAQKANYNVYVSSHTFYLYNDIDYSSFINYHIFFETLLRKYNERKENGELQ . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 7391 8152 . - 0 GCA_005502385.1_01915 GCA_005502385.1_01915_gene,GCA_005502385.1_01915_mRNA GCA_005502385.1_01915 HTH-type transcriptional regulator GlvR GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLLDERVNTNFDKLNDNDLHIAHFVNTHIEQCKTLKIQELSQYTHASNATIHRFTRKLGFDGYSDFKSYLKFESQSLHEVPTDSIKQFKQEIETTFTYLERVNFNLITEKIDKATNVYLYGTGRAQKNVAEEAQRILLTMHKNVIVLHDEHEIKMVLNYSNEDDLFFVISLSGETHQLTEITNLLQLRQRYFISVTTMKDNTLAQKANYNVYVSSHTFYLYNDIDYSSFINYHIFFETLLRKYNERKENGELQ persistent 253 MurR/RpiR family transcriptional regulator WP_048679170.1 UPI0006610973 UniRef100_UPI0006610973,UniRef50_A0A0D1GF60,UniRef90_A0A8X8GJT1 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 8354 9955 . + . GCA_005502385.1_01916_gene GCA_005502385.1_01916 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNAIKRFGSAMIVPVLMFAFFGIILGFATLFKNPTIMGGLADSHTFWFKFWSVIESGGWVIFNHMEIVFVVGLPISLAKKAPGHAALAALMGYLMFNTFINTILTQWPHTFGANLQKGVENVTGLKAIAGIPTLDTNILGGIIISAIVTWIHNRYYSKKLPEMLGVFQGLTFVVTISFFVMLPVAAITCVVWPTIQSGIESLQHFIIASGYIGVWLYHFLERVLIPTGLHHFVYAPIEVGPVVAKDGLKAEWFRHLNQFAESSKPLKDQFHYGFMLQGNGKVFGAIGIALAMYSTTPKENRKKVAALLIPATLTAVVVGITEPLEFTFLFIAPFLFVIHALLAATMDTIMYGFGVVGNMGGGLLDFIATNWIPLGQNHWMTYVAQVIIGLIFSAIYFFVFRYLILKFDIPLPGRRAEEEVKLFSKKDYKEKKGEDSTDTSGFEPSNEYEEKAYYYLEGLGGKENIKDVTNCTTRLRLTVNDESKVEDTAYFTHQQMSHGLVKSGKNVQVVVGMTVPQVREAFEHLVFDENDKK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 8354 9955 . + . GCA_005502385.1_01916_mRNA GCA_005502385.1_01916 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNAIKRFGSAMIVPVLMFAFFGIILGFATLFKNPTIMGGLADSHTFWFKFWSVIESGGWVIFNHMEIVFVVGLPISLAKKAPGHAALAALMGYLMFNTFINTILTQWPHTFGANLQKGVENVTGLKAIAGIPTLDTNILGGIIISAIVTWIHNRYYSKKLPEMLGVFQGLTFVVTISFFVMLPVAAITCVVWPTIQSGIESLQHFIIASGYIGVWLYHFLERVLIPTGLHHFVYAPIEVGPVVAKDGLKAEWFRHLNQFAESSKPLKDQFHYGFMLQGNGKVFGAIGIALAMYSTTPKENRKKVAALLIPATLTAVVVGITEPLEFTFLFIAPFLFVIHALLAATMDTIMYGFGVVGNMGGGLLDFIATNWIPLGQNHWMTYVAQVIIGLIFSAIYFFVFRYLILKFDIPLPGRRAEEEVKLFSKKDYKEKKGEDSTDTSGFEPSNEYEEKAYYYLEGLGGKENIKDVTNCTTRLRLTVNDESKVEDTAYFTHQQMSHGLVKSGKNVQVVVGMTVPQVREAFEHLVFDENDKK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 8354 9955 . + 0 GCA_005502385.1_01916 GCA_005502385.1_01916_gene,GCA_005502385.1_01916_mRNA GCA_005502385.1_01916 PTS system maltose-specific EIICB component GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNAIKRFGSAMIVPVLMFAFFGIILGFATLFKNPTIMGGLADSHTFWFKFWSVIESGGWVIFNHMEIVFVVGLPISLAKKAPGHAALAALMGYLMFNTFINTILTQWPHTFGANLQKGVENVTGLKAIAGIPTLDTNILGGIIISAIVTWIHNRYYSKKLPEMLGVFQGLTFVVTISFFVMLPVAAITCVVWPTIQSGIESLQHFIIASGYIGVWLYHFLERVLIPTGLHHFVYAPIEVGPVVAKDGLKAEWFRHLNQFAESSKPLKDQFHYGFMLQGNGKVFGAIGIALAMYSTTPKENRKKVAALLIPATLTAVVVGITEPLEFTFLFIAPFLFVIHALLAATMDTIMYGFGVVGNMGGGLLDFIATNWIPLGQNHWMTYVAQVIIGLIFSAIYFFVFRYLILKFDIPLPGRRAEEEVKLFSKKDYKEKKGEDSTDTSGFEPSNEYEEKAYYYLEGLGGKENIKDVTNCTTRLRLTVNDESKVEDTAYFTHQQMSHGLVKSGKNVQVVVGMTVPQVREAFEHLVFDENDKK persistent 533 ptsG2 PTS alpha-glucoside transporter subunit IIBC 2.7.1.-,2.7.1.208 COG1264,G WP_017174901.1 UPI0003080278 UniRef100_A0A4Q9WSR5,UniRef50_P54715,UniRef90_A0A1J3ZX46 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 10001 10531 . - . GCA_005502385.1_01917_gene GCA_005502385.1_01917 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MWIDKFETYILNIVGLQSRSTKRQLMKICRNVQFCESFQYNIIKYNNTPALEISLPKQQLPYFISFLSFYQISIYQILSSRNTHILLDSGQYYSSSKRFNLCIDGLQDAFIKDKVIDIMTYFSNQYDLTYTLNNNYASVCCKPEIFSKLIQFIACRNIDILSATYKARALHNARIS . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 10001 10531 . - . GCA_005502385.1_01917_mRNA GCA_005502385.1_01917 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MWIDKFETYILNIVGLQSRSTKRQLMKICRNVQFCESFQYNIIKYNNTPALEISLPKQQLPYFISFLSFYQISIYQILSSRNTHILLDSGQYYSSSKRFNLCIDGLQDAFIKDKVIDIMTYFSNQYDLTYTLNNNYASVCCKPEIFSKLIQFIACRNIDILSATYKARALHNARIS . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 10001 10531 . - 0 GCA_005502385.1_01917 GCA_005502385.1_01917_gene,GCA_005502385.1_01917_mRNA GCA_005502385.1_01917 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MWIDKFETYILNIVGLQSRSTKRQLMKICRNVQFCESFQYNIIKYNNTPALEISLPKQQLPYFISFLSFYQISIYQILSSRNTHILLDSGQYYSSSKRFNLCIDGLQDAFIKDKVIDIMTYFSNQYDLTYTLNNNYASVCCKPEIFSKLIQFIACRNIDILSATYKARALHNARIS persistent 176 Homing endonuclease LAGLIDADG domain-containing protein WP_017174900.1 UPI0002F8731F UniRef100_A0A4Q9WRN8,UniRef50_A0A974KZR7,UniRef90_A0A974KZR7 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 10816 11730 . + . GCA_005502385.1_01918_gene GCA_005502385.1_01918 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLSKVSEFATKTFLLWMFIAAIIGFIFPTQLATMGQFVPWLLGIVMLGMGMTIKPSDFKLVFKEPRSVIIGVILQFTIMPTLAYTIAKIFNLPAELAIGVILVGCCPGGTSSNVMSYLANANVALSVAITSVSTLLAPFVTPALIYLFAHEWLHVSFLSMLWSVIQVVLLPIIIGFLLQLASKKVTREATKILPIISVVAISLILAAVVGGSKSQILKTGFLIFIVVILHNVVGYLLGYVLAHVFKLDRRDKKAVSIEVGMQNSGLAVSLATVHFSPLAAVPGAVFSFVHNISGPILAKYWSKR . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 10816 11730 . + . GCA_005502385.1_01918_mRNA GCA_005502385.1_01918 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLSKVSEFATKTFLLWMFIAAIIGFIFPTQLATMGQFVPWLLGIVMLGMGMTIKPSDFKLVFKEPRSVIIGVILQFTIMPTLAYTIAKIFNLPAELAIGVILVGCCPGGTSSNVMSYLANANVALSVAITSVSTLLAPFVTPALIYLFAHEWLHVSFLSMLWSVIQVVLLPIIIGFLLQLASKKVTREATKILPIISVVAISLILAAVVGGSKSQILKTGFLIFIVVILHNVVGYLLGYVLAHVFKLDRRDKKAVSIEVGMQNSGLAVSLATVHFSPLAAVPGAVFSFVHNISGPILAKYWSKR . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 10816 11730 . + 0 GCA_005502385.1_01918 GCA_005502385.1_01918_gene,GCA_005502385.1_01918_mRNA GCA_005502385.1_01918 Pantothenate precursors transporter PanS GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLSKVSEFATKTFLLWMFIAAIIGFIFPTQLATMGQFVPWLLGIVMLGMGMTIKPSDFKLVFKEPRSVIIGVILQFTIMPTLAYTIAKIFNLPAELAIGVILVGCCPGGTSSNVMSYLANANVALSVAITSVSTLLAPFVTPALIYLFAHEWLHVSFLSMLWSVIQVVLLPIIIGFLLQLASKKVTREATKILPIISVVAISLILAAVVGGSKSQILKTGFLIFIVVILHNVVGYLLGYVLAHVFKLDRRDKKAVSIEVGMQNSGLAVSLATVHFSPLAAVPGAVFSFVHNISGPILAKYWSKR persistent 304 Symporter WP_017174899.1 UPI00030BDCA3 UniRef100_A0A4Q9WTT5,UniRef50_Q2FVU6,UniRef90_A0AAE5JM82 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 11780 12424 . + . GCA_005502385.1_01919_gene GCA_005502385.1_01919 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MYKAIVFDFDGTIVDTEQHLFNIINKHLISHKATPITLDFYRENIGGEAKDLHEYLEQTIGKDNKEIIYKEHHQTSNQLEINPTIKQLMKYLKQRHIPMAIATSSYKKDIFPVFKSLGLDEYINIIVGRESVEYVKPEPELYLTAVQQLNYSPTHCLAIEDSVNGATAAFRAGLDVIVNTNDMTQKQDFSTIPYIGKDLNGEEIINRFFEKGHV . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 11780 12424 . + . GCA_005502385.1_01919_mRNA GCA_005502385.1_01919 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MYKAIVFDFDGTIVDTEQHLFNIINKHLISHKATPITLDFYRENIGGEAKDLHEYLEQTIGKDNKEIIYKEHHQTSNQLEINPTIKQLMKYLKQRHIPMAIATSSYKKDIFPVFKSLGLDEYINIIVGRESVEYVKPEPELYLTAVQQLNYSPTHCLAIEDSVNGATAAFRAGLDVIVNTNDMTQKQDFSTIPYIGKDLNGEEIINRFFEKGHV . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 11780 12424 . + 0 GCA_005502385.1_01919 GCA_005502385.1_01919_gene,GCA_005502385.1_01919_mRNA GCA_005502385.1_01919 Phosphorylated carbohydrates phosphatase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MYKAIVFDFDGTIVDTEQHLFNIINKHLISHKATPITLDFYRENIGGEAKDLHEYLEQTIGKDNKEIIYKEHHQTSNQLEINPTIKQLMKYLKQRHIPMAIATSSYKKDIFPVFKSLGLDEYINIIVGRESVEYVKPEPELYLTAVQQLNYSPTHCLAIEDSVNGATAAFRAGLDVIVNTNDMTQKQDFSTIPYIGKDLNGEEIINRFFEKGHV persistent 214 HAD family hydrolase WP_017174898.1 UPI0003057898 UniRef100_A0A8X8GR70,UniRef50_Q2FVU7,UniRef90_A0A974KY36 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 12678 12866 . - . GCA_005502385.1_01920_gene GCA_005502385.1_01920 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSVTIGIILIIVLLFLSLIPNYNAMKQAKSQGSKSTRFTVMVGIDAILIVLLVFTIILKIII . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 12678 12866 . - . GCA_005502385.1_01920_mRNA GCA_005502385.1_01920 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSVTIGIILIIVLLFLSLIPNYNAMKQAKSQGSKSTRFTVMVGIDAILIVLLVFTIILKIII . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 12678 12866 . - 0 GCA_005502385.1_01920 GCA_005502385.1_01920_gene,GCA_005502385.1_01920_mRNA GCA_005502385.1_01920 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSVTIGIILIIVLLFLSLIPNYNAMKQAKSQGSKSTRFTVMVGIDAILIVLLVFTIILKIII persistent 62 Mid2-like cell wall stress sensor domain protein WP_002448560.1 UPI00019FC195 UniRef100_A0A1L8Y7Z8,UniRef50_A0A1L8Y7Z8,UniRef90_A0A1L8Y7Z8 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 12871 13215 . - . GCA_005502385.1_01921_gene GCA_005502385.1_01921 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MQHLLKKDMKVSIIFAIVFFLLNFFSEQQHMVSLLILRTLLATLVFFLLYLIVFSIFNSDQRKIKFSITLSIAVIIFLIIGTLLSSPKFGVLTGICVGIIAGFIWEWIEKRKGE . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 12871 13215 . - . GCA_005502385.1_01921_mRNA GCA_005502385.1_01921 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MQHLLKKDMKVSIIFAIVFFLLNFFSEQQHMVSLLILRTLLATLVFFLLYLIVFSIFNSDQRKIKFSITLSIAVIIFLIIGTLLSSPKFGVLTGICVGIIAGFIWEWIEKRKGE . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 12871 13215 . - 0 GCA_005502385.1_01921 GCA_005502385.1_01921_gene,GCA_005502385.1_01921_mRNA GCA_005502385.1_01921 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MQHLLKKDMKVSIIFAIVFFLLNFFSEQQHMVSLLILRTLLATLVFFLLYLIVFSIFNSDQRKIKFSITLSIAVIIFLIIGTLLSSPKFGVLTGICVGIIAGFIWEWIEKRKGE persistent 114 hypothetical protein WP_017174897.1 UPI0003059649 UniRef100_A0A8X8KH41,UniRef50_A0A8X8KH41,UniRef90_A0A8X8KH41 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 13542 14930 . + . GCA_005502385.1_01922_gene GCA_005502385.1_01922 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MDNNELHRGLSARQIRMIALGGTIGVGLFMGATSTIKWTGPSVIFAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASEYIHPAAGYMTAWSNIFQWIVVGMSEVIAVGEYMNYWFPHLPQWIPGVIAVVLLLIANLASVKAFGEFEFWFAMIKVVTIVLMIIAGLGLIFFGIGNGGHPIGISNLWKHGGFMPNGLVGFFFALSIVIGSYQGVELIGITAGETKNPQKNIKSAVNGVIWRILIFYIGAIFVIVSIYPWNQLESIGSPFVATFSKIGITFAAGLINFVVLTAALSGCNSGIFSASRMIYTLAQKGQMPKIFTRVMKNGVPFYPVLTIAIGILIGALLNVILPLFIKGADSIFVYVYSASILPGMIPWFMILISHIRFRKLHPEQVENHPFKMPGGTISSVMTIIFLLIVLIGMLFNKDTVISVVIGIIVLAGVTVYYFIRGHHKNDAIKRVK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 13542 14930 . + . GCA_005502385.1_01922_mRNA GCA_005502385.1_01922 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MDNNELHRGLSARQIRMIALGGTIGVGLFMGATSTIKWTGPSVIFAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASEYIHPAAGYMTAWSNIFQWIVVGMSEVIAVGEYMNYWFPHLPQWIPGVIAVVLLLIANLASVKAFGEFEFWFAMIKVVTIVLMIIAGLGLIFFGIGNGGHPIGISNLWKHGGFMPNGLVGFFFALSIVIGSYQGVELIGITAGETKNPQKNIKSAVNGVIWRILIFYIGAIFVIVSIYPWNQLESIGSPFVATFSKIGITFAAGLINFVVLTAALSGCNSGIFSASRMIYTLAQKGQMPKIFTRVMKNGVPFYPVLTIAIGILIGALLNVILPLFIKGADSIFVYVYSASILPGMIPWFMILISHIRFRKLHPEQVENHPFKMPGGTISSVMTIIFLLIVLIGMLFNKDTVISVVIGIIVLAGVTVYYFIRGHHKNDAIKRVK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 13542 14930 . + 0 GCA_005502385.1_01922 GCA_005502385.1_01922_gene,GCA_005502385.1_01922_mRNA GCA_005502385.1_01922 putative transport protein YifK GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MDNNELHRGLSARQIRMIALGGTIGVGLFMGATSTIKWTGPSVIFAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASEYIHPAAGYMTAWSNIFQWIVVGMSEVIAVGEYMNYWFPHLPQWIPGVIAVVLLLIANLASVKAFGEFEFWFAMIKVVTIVLMIIAGLGLIFFGIGNGGHPIGISNLWKHGGFMPNGLVGFFFALSIVIGSYQGVELIGITAGETKNPQKNIKSAVNGVIWRILIFYIGAIFVIVSIYPWNQLESIGSPFVATFSKIGITFAAGLINFVVLTAALSGCNSGIFSASRMIYTLAQKGQMPKIFTRVMKNGVPFYPVLTIAIGILIGALLNVILPLFIKGADSIFVYVYSASILPGMIPWFMILISHIRFRKLHPEQVENHPFKMPGGTISSVMTIIFLLIVLIGMLFNKDTVISVVIGIIVLAGVTVYYFIRGHHKNDAIKRVK persistent 462 ansP Amino acid permease/ SLC12A domain-containing protein COG1113,E WP_019835274.1 UPI00036CBA73 UniRef100_A0A3S7GWP1,UniRef50_P27837,UniRef90_Q4L8H7 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 15146 16018 . - . GCA_005502385.1_01923_gene GCA_005502385.1_01923 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTNILSRIDEVYASSSKSEQKLSRFILNSPHKLVSMSNEAIADELNISVSTMNRYSQKLINQNFKAIRDEIKQWFPKQVTPYNIKLVENESVESLKQKLYFQTKASLKQSNHFIDHQTIDAICETFKQAHTIFLYGYGSSYVCALEFYQKLSRIGLNIQLVQDTHLLTTMLSTHNKNDCVVFITHSGEQSELQAMVKVVKDFNLSMITITSSNNNSIAKDSDLVLTYNEDYKNELCMSATTALFAQLYTIDIIFYRFIARNYHASLDYMTQSKISLDNYHKYLSKIEFKH . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 15146 16018 . - . GCA_005502385.1_01923_mRNA GCA_005502385.1_01923 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTNILSRIDEVYASSSKSEQKLSRFILNSPHKLVSMSNEAIADELNISVSTMNRYSQKLINQNFKAIRDEIKQWFPKQVTPYNIKLVENESVESLKQKLYFQTKASLKQSNHFIDHQTIDAICETFKQAHTIFLYGYGSSYVCALEFYQKLSRIGLNIQLVQDTHLLTTMLSTHNKNDCVVFITHSGEQSELQAMVKVVKDFNLSMITITSSNNNSIAKDSDLVLTYNEDYKNELCMSATTALFAQLYTIDIIFYRFIARNYHASLDYMTQSKISLDNYHKYLSKIEFKH . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 15146 16018 . - 0 GCA_005502385.1_01923 GCA_005502385.1_01923_gene,GCA_005502385.1_01923_mRNA GCA_005502385.1_01923 putative HTH-type transcriptional regulator YbbH GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTNILSRIDEVYASSSKSEQKLSRFILNSPHKLVSMSNEAIADELNISVSTMNRYSQKLINQNFKAIRDEIKQWFPKQVTPYNIKLVENESVESLKQKLYFQTKASLKQSNHFIDHQTIDAICETFKQAHTIFLYGYGSSYVCALEFYQKLSRIGLNIQLVQDTHLLTTMLSTHNKNDCVVFITHSGEQSELQAMVKVVKDFNLSMITITSSNNNSIAKDSDLVLTYNEDYKNELCMSATTALFAQLYTIDIIFYRFIARNYHASLDYMTQSKISLDNYHKYLSKIEFKH persistent 290 rpiR RpiR family transcriptional regulator WP_017174895.1 UPI0003080A6B UniRef100_A0A3S7GZ95,UniRef50_A0A3S7GZ95,UniRef90_A0A3S7GZ95 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 16342 16695 . - . GCA_005502385.1_01924_gene GCA_005502385.1_01924 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MHYKTLIYDQHILIQLLILLEKAKYYYFMDIAHLSLGIKDYNNFINHCRAHFKHNQINSISSHCSDSQTYCFEQYNELMTHLKQIPLQNFKNGNLIVDLQERQNHIYKVYNQINNYQ . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 16342 16695 . - . GCA_005502385.1_01924_mRNA GCA_005502385.1_01924 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MHYKTLIYDQHILIQLLILLEKAKYYYFMDIAHLSLGIKDYNNFINHCRAHFKHNQINSISSHCSDSQTYCFEQYNELMTHLKQIPLQNFKNGNLIVDLQERQNHIYKVYNQINNYQ . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 16342 16695 . - 0 GCA_005502385.1_01924 GCA_005502385.1_01924_gene,GCA_005502385.1_01924_mRNA GCA_005502385.1_01924 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MHYKTLIYDQHILIQLLILLEKAKYYYFMDIAHLSLGIKDYNNFINHCRAHFKHNQINSISSHCSDSQTYCFEQYNELMTHLKQIPLQNFKNGNLIVDLQERQNHIYKVYNQINNYQ persistent 117 hypothetical protein WP_017174894.1 UPI0003196AE9 UniRef100_A0A8X8GPG2,UniRef50_A0A657ZSX8,UniRef90_A0A657ZSX8 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 16801 17496 . - . GCA_005502385.1_01925_gene GCA_005502385.1_01925 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNKMERQNQIISLIQQGHKINASDLAKQFNVSTRTITRDIDDLESKGVHIYAHKGRRGGYEIQNTDHYFHLKLNESELIALFLTLQESQSHSTLPYTQDIHSIINQCLKTPNTQMLKILKHISNNIKLEDTHSLTLPHLFSDILIYSNERHVMLVDFSENNEITAENVIFIGLLCRNGQWFAIVYEIGFGRTRELSILNIVDISYSFEKKIQTYDITIHNYKEFLQPKNNE . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 16801 17496 . - . GCA_005502385.1_01925_mRNA GCA_005502385.1_01925 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNKMERQNQIISLIQQGHKINASDLAKQFNVSTRTITRDIDDLESKGVHIYAHKGRRGGYEIQNTDHYFHLKLNESELIALFLTLQESQSHSTLPYTQDIHSIINQCLKTPNTQMLKILKHISNNIKLEDTHSLTLPHLFSDILIYSNERHVMLVDFSENNEITAENVIFIGLLCRNGQWFAIVYEIGFGRTRELSILNIVDISYSFEKKIQTYDITIHNYKEFLQPKNNE . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 16801 17496 . - 0 GCA_005502385.1_01925 GCA_005502385.1_01925_gene,GCA_005502385.1_01925_mRNA GCA_005502385.1_01925 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNKMERQNQIISLIQQGHKINASDLAKQFNVSTRTITRDIDDLESKGVHIYAHKGRRGGYEIQNTDHYFHLKLNESELIALFLTLQESQSHSTLPYTQDIHSIINQCLKTPNTQMLKILKHISNNIKLEDTHSLTLPHLFSDILIYSNERHVMLVDFSENNEITAENVIFIGLLCRNGQWFAIVYEIGFGRTRELSILNIVDISYSFEKKIQTYDITIHNYKEFLQPKNNE persistent 231 DNA-binding transcriptional regulator WP_070436506.1 UPI0008A46F3C UniRef100_UPI0008A46F3C,UniRef50_Q2FVV6,UniRef90_A0AAE5JM75 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 17656 17808 . + . GCA_005502385.1_01926_gene GCA_005502385.1_01926 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 17656 17808 . + . GCA_005502385.1_01926_mRNA GCA_005502385.1_01926 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 . . . . . . . GCA_005502385.1|SCOV01000007.1 Infernal:001001 misc_RNA 17656 17808 158.3 + . GCA_005502385.1_01926 GCA_005502385.1_01926_gene,GCA_005502385.1_01926_mRNA GCA_005502385.1_01926 RsaOG GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 17865 18644 . + . GCA_005502385.1_01927_gene GCA_005502385.1_01927 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MQKQQLQFIDKHITDWFQHLDGIIPNLIKNMVTETKENRFDLVTNVDKQIQNDFEAYLEKYFPTHQLLAEEKNNEGIEPYQGHLWIMDPIDGTANLVKQQEDYCIILAYFENGQPKLSYIYDYAHKIIYKAIEGKGAFMNNVKLESPEVLSLKDTIVSFGSEYVNEKLSKALYQSSFSVRYIGACGLDSVRVIKGQFGAHFNTNPKPWDIAAQFLFARELGLVMTQMDGQHLDFAKGGPFIISNKGCYEEILAIINDKH . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 17865 18644 . + . GCA_005502385.1_01927_mRNA GCA_005502385.1_01927 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MQKQQLQFIDKHITDWFQHLDGIIPNLIKNMVTETKENRFDLVTNVDKQIQNDFEAYLEKYFPTHQLLAEEKNNEGIEPYQGHLWIMDPIDGTANLVKQQEDYCIILAYFENGQPKLSYIYDYAHKIIYKAIEGKGAFMNNVKLESPEVLSLKDTIVSFGSEYVNEKLSKALYQSSFSVRYIGACGLDSVRVIKGQFGAHFNTNPKPWDIAAQFLFARELGLVMTQMDGQHLDFAKGGPFIISNKGCYEEILAIINDKH . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 17865 18644 . + 0 GCA_005502385.1_01927 GCA_005502385.1_01927_gene,GCA_005502385.1_01927_mRNA GCA_005502385.1_01927 Fructose-1%2C6-bisphosphatase/inositol-1-monophosphatase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MQKQQLQFIDKHITDWFQHLDGIIPNLIKNMVTETKENRFDLVTNVDKQIQNDFEAYLEKYFPTHQLLAEEKNNEGIEPYQGHLWIMDPIDGTANLVKQQEDYCIILAYFENGQPKLSYIYDYAHKIIYKAIEGKGAFMNNVKLESPEVLSLKDTIVSFGSEYVNEKLSKALYQSSFSVRYIGACGLDSVRVIKGQFGAHFNTNPKPWDIAAQFLFARELGLVMTQMDGQHLDFAKGGPFIISNKGCYEEILAIINDKH persistent 259 Inositol monophosphatase WP_048762118.1 UPI000660E091 UniRef100_UPI000660E091,UniRef50_Q2FVV7,UniRef90_A0A3S7GW88 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 18760 19707 . + . GCA_005502385.1_01928_gene GCA_005502385.1_01928 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MQRPDRKKRSSSKIMKWIISILVVLAVVTVAVIATTILITGNKIHNPLHRQQSELRSHNVNLKNGDPFTIALFGVDSNAQRKSTNDGERSDTIMILSVNPKKKTTELVSIPRDTQAEIVGRGTTEKINHAYAYGGPTMAVKSLEKLMNVPIDHYATIDMDGLHDMIDSVGGVNIVSNDTFTVQGTTFTKGQSTHVDGDTAMAFIRSRKETGAGGDFGRQERQQLVLQAMANKMVSSSVITHLPSLITQIQKNVTTDLTLGDLNEIRSHYKEANDTVNRHQLEGTGSIQNDGLWYFIPNESSKVQMTEVLNNNLKK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 18760 19707 . + . GCA_005502385.1_01928_mRNA GCA_005502385.1_01928 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MQRPDRKKRSSSKIMKWIISILVVLAVVTVAVIATTILITGNKIHNPLHRQQSELRSHNVNLKNGDPFTIALFGVDSNAQRKSTNDGERSDTIMILSVNPKKKTTELVSIPRDTQAEIVGRGTTEKINHAYAYGGPTMAVKSLEKLMNVPIDHYATIDMDGLHDMIDSVGGVNIVSNDTFTVQGTTFTKGQSTHVDGDTAMAFIRSRKETGAGGDFGRQERQQLVLQAMANKMVSSSVITHLPSLITQIQKNVTTDLTLGDLNEIRSHYKEANDTVNRHQLEGTGSIQNDGLWYFIPNESSKVQMTEVLNNNLKK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 18760 19707 . + 0 GCA_005502385.1_01928 GCA_005502385.1_01928_gene,GCA_005502385.1_01928_mRNA GCA_005502385.1_01928 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MQRPDRKKRSSSKIMKWIISILVVLAVVTVAVIATTILITGNKIHNPLHRQQSELRSHNVNLKNGDPFTIALFGVDSNAQRKSTNDGERSDTIMILSVNPKKKTTELVSIPRDTQAEIVGRGTTEKINHAYAYGGPTMAVKSLEKLMNVPIDHYATIDMDGLHDMIDSVGGVNIVSNDTFTVQGTTFTKGQSTHVDGDTAMAFIRSRKETGAGGDFGRQERQQLVLQAMANKMVSSSVITHLPSLITQIQKNVTTDLTLGDLNEIRSHYKEANDTVNRHQLEGTGSIQNDGLWYFIPNESSKVQMTEVLNNNLKK persistent 315 LCP family protein 2.7.8.- WP_048762117.1 UPI00065F8FED UniRef100_UPI00065F8FED,UniRef50_A0A640MZN0,UniRef90_A0A8X8GPZ8 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 19962 22913 . + . GCA_005502385.1_01929_gene GCA_005502385.1_01929 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MQEHLVLTLDDVDYLVEPGTNLLEFIKSRDTFVPSICYNESMGPIQTCDTCMVEIDGKVERACSTVVDRPMSVNTQNKRVKASQKEALDRILEKHMLYCTVCDYNNGDCEIHNAMDAWGLQEQSYEYKTKPYEKDYGPFYRYDPDQCILCGRCVEACQDVEVNETLSIDWDREHPRVIWDNDVPINESSCVSCGQCATVCPCNAMMEVNMEGNAGYLTDTEPGSLASMIDLTKKAEPGDGLLFAVSDSEAEMRKERINKTKTVCTYCGVGCSFDVWTKDREILKVQPSHDSPANKISTCVKGKFSWGHINSDQRLTKPLVRKNGEFHEVEWEEALDVIEKNFKRIKNEYGGDHLAFIASSKGTNEESYLMQKLSRQVFGSNNIDNCSRYCQAPATKGLFRTVGHGGDSGSIDDLEKATMTVLIGTNTAEAHPVIASRIKRAQKLFGQRMHVFDIRKHEMAERADEFYQPKPGTDLVWLSAVTKYIIDHHLHDIEFIKEWVDNFDEYYESLTPFSLEYTEEVTGISKTRLISFAEECAKAESVAICWAMGVTQQDIGSDTSTAISNLLLVTGNYRRPGTGAYPLRGHNNVQGASDMGSMPDQFPGYQMIHNDEIRSKFEKEYGVTLNPTPGRDNHQMMDGIHEGQIHSLYLYGEDTGIVDSNINYVQSALEKVEFLVVQDEFLTFTATYADVVLPASPSLEKDGTYTNTERRIQRINQALSPLGDSKPDWVIFQLIAKRMGFDWNYSHPSEIMDEIARLTPSYSGVSYERLEGFNSLQWPVAPDGTDQPTLYLDGFNFDNKRAKLFELTFDNFFKEDEVYDLHVNNGRVLEHFHEGNMTYQTEMIKYKMPHAFVEISPELAKDRDIHEGAEVKLISDTGEATLVATITDRVKGKEIYIPLNNDAMSNGDIGAINKLTNSDVDYATHTPSYKRTHCRLEVITRKGKSPLNPTNFRVDKHRHPQYSVQVQKKWKRKDYIFPGNVVD . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 19962 22913 . + . GCA_005502385.1_01929_mRNA GCA_005502385.1_01929 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MQEHLVLTLDDVDYLVEPGTNLLEFIKSRDTFVPSICYNESMGPIQTCDTCMVEIDGKVERACSTVVDRPMSVNTQNKRVKASQKEALDRILEKHMLYCTVCDYNNGDCEIHNAMDAWGLQEQSYEYKTKPYEKDYGPFYRYDPDQCILCGRCVEACQDVEVNETLSIDWDREHPRVIWDNDVPINESSCVSCGQCATVCPCNAMMEVNMEGNAGYLTDTEPGSLASMIDLTKKAEPGDGLLFAVSDSEAEMRKERINKTKTVCTYCGVGCSFDVWTKDREILKVQPSHDSPANKISTCVKGKFSWGHINSDQRLTKPLVRKNGEFHEVEWEEALDVIEKNFKRIKNEYGGDHLAFIASSKGTNEESYLMQKLSRQVFGSNNIDNCSRYCQAPATKGLFRTVGHGGDSGSIDDLEKATMTVLIGTNTAEAHPVIASRIKRAQKLFGQRMHVFDIRKHEMAERADEFYQPKPGTDLVWLSAVTKYIIDHHLHDIEFIKEWVDNFDEYYESLTPFSLEYTEEVTGISKTRLISFAEECAKAESVAICWAMGVTQQDIGSDTSTAISNLLLVTGNYRRPGTGAYPLRGHNNVQGASDMGSMPDQFPGYQMIHNDEIRSKFEKEYGVTLNPTPGRDNHQMMDGIHEGQIHSLYLYGEDTGIVDSNINYVQSALEKVEFLVVQDEFLTFTATYADVVLPASPSLEKDGTYTNTERRIQRINQALSPLGDSKPDWVIFQLIAKRMGFDWNYSHPSEIMDEIARLTPSYSGVSYERLEGFNSLQWPVAPDGTDQPTLYLDGFNFDNKRAKLFELTFDNFFKEDEVYDLHVNNGRVLEHFHEGNMTYQTEMIKYKMPHAFVEISPELAKDRDIHEGAEVKLISDTGEATLVATITDRVKGKEIYIPLNNDAMSNGDIGAINKLTNSDVDYATHTPSYKRTHCRLEVITRKGKSPLNPTNFRVDKHRHPQYSVQVQKKWKRKDYIFPGNVVD . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 19962 22913 . + 0 GCA_005502385.1_01929 GCA_005502385.1_01929_gene,GCA_005502385.1_01929_mRNA GCA_005502385.1_01929 Putative formate dehydrogenase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MQEHLVLTLDDVDYLVEPGTNLLEFIKSRDTFVPSICYNESMGPIQTCDTCMVEIDGKVERACSTVVDRPMSVNTQNKRVKASQKEALDRILEKHMLYCTVCDYNNGDCEIHNAMDAWGLQEQSYEYKTKPYEKDYGPFYRYDPDQCILCGRCVEACQDVEVNETLSIDWDREHPRVIWDNDVPINESSCVSCGQCATVCPCNAMMEVNMEGNAGYLTDTEPGSLASMIDLTKKAEPGDGLLFAVSDSEAEMRKERINKTKTVCTYCGVGCSFDVWTKDREILKVQPSHDSPANKISTCVKGKFSWGHINSDQRLTKPLVRKNGEFHEVEWEEALDVIEKNFKRIKNEYGGDHLAFIASSKGTNEESYLMQKLSRQVFGSNNIDNCSRYCQAPATKGLFRTVGHGGDSGSIDDLEKATMTVLIGTNTAEAHPVIASRIKRAQKLFGQRMHVFDIRKHEMAERADEFYQPKPGTDLVWLSAVTKYIIDHHLHDIEFIKEWVDNFDEYYESLTPFSLEYTEEVTGISKTRLISFAEECAKAESVAICWAMGVTQQDIGSDTSTAISNLLLVTGNYRRPGTGAYPLRGHNNVQGASDMGSMPDQFPGYQMIHNDEIRSKFEKEYGVTLNPTPGRDNHQMMDGIHEGQIHSLYLYGEDTGIVDSNINYVQSALEKVEFLVVQDEFLTFTATYADVVLPASPSLEKDGTYTNTERRIQRINQALSPLGDSKPDWVIFQLIAKRMGFDWNYSHPSEIMDEIARLTPSYSGVSYERLEGFNSLQWPVAPDGTDQPTLYLDGFNFDNKRAKLFELTFDNFFKEDEVYDLHVNNGRVLEHFHEGNMTYQTEMIKYKMPHAFVEISPELAKDRDIHEGAEVKLISDTGEATLVATITDRVKGKEIYIPLNNDAMSNGDIGAINKLTNSDVDYATHTPSYKRTHCRLEVITRKGKSPLNPTNFRVDKHRHPQYSVQVQKKWKRKDYIFPGNVVD persistent 983 fdhF formate dehydrogenase subunit alpha 1.17.1.9 GO:0008863,GO:0009326,GO:0015942 WP_048762116.1 UPI000660F8AB UniRef100_UPI000660F8AB,UniRef50_Q49ZN0,UniRef90_A0A3S7GW84 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 22915 23382 . + . GCA_005502385.1_01930_gene GCA_005502385.1_01930 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAERITKINRLEKSKEQLKLESLNEVTDAIVENKDSILKAIRIIKNLDDAKLLDAINGGIKGRQVIINKFATELNKDMYTGLITNLAPMVFMLGNLEVKELSQFLNKLNSGLHVANQASPNAKTTIRSLMSVLKDDDMNRSLTYMINLLKGMSKE . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 22915 23382 . + . GCA_005502385.1_01930_mRNA GCA_005502385.1_01930 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAERITKINRLEKSKEQLKLESLNEVTDAIVENKDSILKAIRIIKNLDDAKLLDAINGGIKGRQVIINKFATELNKDMYTGLITNLAPMVFMLGNLEVKELSQFLNKLNSGLHVANQASPNAKTTIRSLMSVLKDDDMNRSLTYMINLLKGMSKE . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 22915 23382 . + 0 GCA_005502385.1_01930 GCA_005502385.1_01930_gene,GCA_005502385.1_01930_mRNA GCA_005502385.1_01930 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAERITKINRLEKSKEQLKLESLNEVTDAIVENKDSILKAIRIIKNLDDAKLLDAINGGIKGRQVIINKFATELNKDMYTGLITNLAPMVFMLGNLEVKELSQFLNKLNSGLHVANQASPNAKTTIRSLMSVLKDDDMNRSLTYMINLLKGMSKE persistent 155 DUF1641 domain-containing protein WP_017174889.1 UPI00031412DB UniRef100_A0A8X8GJR9,UniRef50_Q2FVW0,UniRef90_A0AAE5JNW7 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 23491 23769 . + . GCA_005502385.1_01931_gene GCA_005502385.1_01931 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MYKLKCKERGLIHPNIIKIMTIISNIFVVLGIIFLIMMKLMLAIAMFAVSLAISLVIFNVLFRDRTGMKIIINISFAIVIIAIIVAYSMLSK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 23491 23769 . + . GCA_005502385.1_01931_mRNA GCA_005502385.1_01931 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MYKLKCKERGLIHPNIIKIMTIISNIFVVLGIIFLIMMKLMLAIAMFAVSLAISLVIFNVLFRDRTGMKIIINISFAIVIIAIIVAYSMLSK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 23491 23769 . + 0 GCA_005502385.1_01931 GCA_005502385.1_01931_gene,GCA_005502385.1_01931_mRNA GCA_005502385.1_01931 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MYKLKCKERGLIHPNIIKIMTIISNIFVVLGIIFLIMMKLMLAIAMFAVSLAISLVIFNVLFRDRTGMKIIINISFAIVIIAIIVAYSMLSK persistent 92 Group-Specific protein UniRef50_A0A640MZA9,UniRef90_A0A6B8SG87 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 23793 24584 . + . GCA_005502385.1_01932_gene GCA_005502385.1_01932 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKYRNSNQLRLSIILFIIVLIILIVLLCINHKDILRNDRRYSFQEALQKQTQSNQLNTIDKNNQFVLANNNEVKRAMSISKKDNDLKYMDLSKTVPMNEDEVKHILKNKGILTDQAQTFLKAQDKYQVNIIYLMNHAIIETANGQSELANGIKENNHKYYNFFGIGAFDQDAIATGHSYAKEHNWTTPSKAIMGGAAFIRHQYFENEQITLYQMRWNPKNPGSHQYASDIEWVDKIADNMKKDYERLGIKKDKIRRNYYISNK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 23793 24584 . + . GCA_005502385.1_01932_mRNA GCA_005502385.1_01932 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKYRNSNQLRLSIILFIIVLIILIVLLCINHKDILRNDRRYSFQEALQKQTQSNQLNTIDKNNQFVLANNNEVKRAMSISKKDNDLKYMDLSKTVPMNEDEVKHILKNKGILTDQAQTFLKAQDKYQVNIIYLMNHAIIETANGQSELANGIKENNHKYYNFFGIGAFDQDAIATGHSYAKEHNWTTPSKAIMGGAAFIRHQYFENEQITLYQMRWNPKNPGSHQYASDIEWVDKIADNMKKDYERLGIKKDKIRRNYYISNK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 23793 24584 . + 0 GCA_005502385.1_01932 GCA_005502385.1_01932_gene,GCA_005502385.1_01932_mRNA GCA_005502385.1_01932 hypothetical protein """""" GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKYRNSNQLRLSIILFIIVLIILIVLLCINHKDILRNDRRYSFQEALQKQTQSNQLNTIDKNNQFVLANNNEVKRAMSISKKDNDLKYMDLSKTVPMNEDEVKHILKNKGILTDQAQTFLKAQDKYQVNIIYLMNHAIIETANGQSELANGIKENNHKYYNFFGIGAFDQDAIATGHSYAKEHNWTTPSKAIMGGAAFIRHQYFENEQITLYQMRWNPKNPGSHQYASDIEWVDKIADNMKKDYERLGIKKDKIRRNYYISNK persistent 263 Autolysin UniRef50_A0A0D6XQN6,UniRef90_A0A3S7GWV9 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 24605 25729 . + . GCA_005502385.1_01933_gene GCA_005502385.1_01933 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKVAVIGAGIGGLTVAALLQEQGHDVKVFERKTDIKEVGAGIGIGDNVLKKLGNHDLAKGIKNAGQNLKSLNIYSDKGDLLTSAKLKEGTLNVTLSRQSLIELISSYVKPNTVFTDYEVTKVDVQSELPMLHFLKHASQTFDLCIGADGIHSIVRKALFPDSKVIYQGYTCFRGMIDEADIMNQYTADEYWGRRGRVGIVPLINNQAYWFITINANEKDPKYVSFEKPHLQAYFNHYPNQVRALLDKQSETGIIKNDLYDLKPLTSFVHRRTVLLGDAAHAMTPNMGQGAGQAMEDAIVLANCIASYDLEKALQRYNKLRVKHTKKVIKRSRKVGNIAQKDNKLVVALRNAIMKRMPKRFFSGQTKFLYKTKDK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 24605 25729 . + . GCA_005502385.1_01933_mRNA GCA_005502385.1_01933 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKVAVIGAGIGGLTVAALLQEQGHDVKVFERKTDIKEVGAGIGIGDNVLKKLGNHDLAKGIKNAGQNLKSLNIYSDKGDLLTSAKLKEGTLNVTLSRQSLIELISSYVKPNTVFTDYEVTKVDVQSELPMLHFLKHASQTFDLCIGADGIHSIVRKALFPDSKVIYQGYTCFRGMIDEADIMNQYTADEYWGRRGRVGIVPLINNQAYWFITINANEKDPKYVSFEKPHLQAYFNHYPNQVRALLDKQSETGIIKNDLYDLKPLTSFVHRRTVLLGDAAHAMTPNMGQGAGQAMEDAIVLANCIASYDLEKALQRYNKLRVKHTKKVIKRSRKVGNIAQKDNKLVVALRNAIMKRMPKRFFSGQTKFLYKTKDK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 24605 25729 . + 0 GCA_005502385.1_01933 GCA_005502385.1_01933_gene,GCA_005502385.1_01933_mRNA GCA_005502385.1_01933 Aurachin C monooxygenase/isomerase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKVAVIGAGIGGLTVAALLQEQGHDVKVFERKTDIKEVGAGIGIGDNVLKKLGNHDLAKGIKNAGQNLKSLNIYSDKGDLLTSAKLKEGTLNVTLSRQSLIELISSYVKPNTVFTDYEVTKVDVQSELPMLHFLKHASQTFDLCIGADGIHSIVRKALFPDSKVIYQGYTCFRGMIDEADIMNQYTADEYWGRRGRVGIVPLINNQAYWFITINANEKDPKYVSFEKPHLQAYFNHYPNQVRALLDKQSETGIIKNDLYDLKPLTSFVHRRTVLLGDAAHAMTPNMGQGAGQAMEDAIVLANCIASYDLEKALQRYNKLRVKHTKKVIKRSRKVGNIAQKDNKLVVALRNAIMKRMPKRFFSGQTKFLYKTKDK persistent 374 FAD-binding domain-containing protein UniRef50_A0A380C5V0,UniRef90_A0A974KZQ5 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 25786 26745 . - . GCA_005502385.1_01934_gene GCA_005502385.1_01934 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MEKVYIAGKIPEAGLNLLKEHFEVDMYEGEGIIDKETLKKGVKDASALISILSTNVDKEVIDSGENLKIIANYGAGFNNVDVDYAREKNIDVTNTPKASTAATAELTFGLVLAIARRIVEGDKLSRTKGFDGWAPLFFRGREVSGKTLGIIGFGEIGSAVAKRAKGFDMDILYTGPHQKKEKEREIGAKYVDLDTLLEHSDFITINAAYNPDIHHMIDSEQFKKMKSTAYLVNAGRGPIVNEQALVDALKHKDIEGAALDVYEFEPDITEGLKSLDNVVITPHIGNATFEAREMMSKIVANDTIKKLNGEEPQFVVNKK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 25786 26745 . - . GCA_005502385.1_01934_mRNA GCA_005502385.1_01934 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MEKVYIAGKIPEAGLNLLKEHFEVDMYEGEGIIDKETLKKGVKDASALISILSTNVDKEVIDSGENLKIIANYGAGFNNVDVDYAREKNIDVTNTPKASTAATAELTFGLVLAIARRIVEGDKLSRTKGFDGWAPLFFRGREVSGKTLGIIGFGEIGSAVAKRAKGFDMDILYTGPHQKKEKEREIGAKYVDLDTLLEHSDFITINAAYNPDIHHMIDSEQFKKMKSTAYLVNAGRGPIVNEQALVDALKHKDIEGAALDVYEFEPDITEGLKSLDNVVITPHIGNATFEAREMMSKIVANDTIKKLNGEEPQFVVNKK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 25786 26745 . - 0 GCA_005502385.1_01934 GCA_005502385.1_01934_gene,GCA_005502385.1_01934_mRNA GCA_005502385.1_01934 Putative 2-hydroxyacid dehydrogenase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MEKVYIAGKIPEAGLNLLKEHFEVDMYEGEGIIDKETLKKGVKDASALISILSTNVDKEVIDSGENLKIIANYGAGFNNVDVDYAREKNIDVTNTPKASTAATAELTFGLVLAIARRIVEGDKLSRTKGFDGWAPLFFRGREVSGKTLGIIGFGEIGSAVAKRAKGFDMDILYTGPHQKKEKEREIGAKYVDLDTLLEHSDFITINAAYNPDIHHMIDSEQFKKMKSTAYLVNAGRGPIVNEQALVDALKHKDIEGAALDVYEFEPDITEGLKSLDNVVITPHIGNATFEAREMMSKIVANDTIKKLNGEEPQFVVNKK persistent 319 Glycerate dehydrogenase WP_017174885.1 UPI00031D15ED UniRef100_A0A1L8Y7Z3,UniRef50_Q5HLU4,UniRef90_A0A380FZ09 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 26825 27139 . - . GCA_005502385.1_01935_gene GCA_005502385.1_01935 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAWLYLLVAGCFEILGVVFLNELNRTHKKIYILLGALTFIFSFSTLKLSMQTISMGTAYAIWTGIGTAGGTIVGMIFYNESKKFIRIFCIGLILISVIALKIIQ . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 26825 27139 . - . GCA_005502385.1_01935_mRNA GCA_005502385.1_01935 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAWLYLLVAGCFEILGVVFLNELNRTHKKIYILLGALTFIFSFSTLKLSMQTISMGTAYAIWTGIGTAGGTIVGMIFYNESKKFIRIFCIGLILISVIALKIIQ . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 26825 27139 . - 0 GCA_005502385.1_01935 GCA_005502385.1_01935_gene,GCA_005502385.1_01935_mRNA GCA_005502385.1_01935 putative guanidinium efflux system subunit GdnD GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAWLYLLVAGCFEILGVVFLNELNRTHKKIYILLGALTFIFSFSTLKLSMQTISMGTAYAIWTGIGTAGGTIVGMIFYNESKKFIRIFCIGLILISVIALKIIQ persistent 104 qacE QacE family quaternary ammonium compound efflux SMR transporter WP_017174884.1 UPI0002DA7120 UniRef100_A0A1L8Y7X8,UniRef50_B9DLW8,UniRef90_A0A974KY34 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 27141 27470 . - . GCA_005502385.1_01936_gene GCA_005502385.1_01936 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MQWLKVILSGLIEVVWVTCLNYAHNTFTWLITLLFIALSFYLMLSATKQLPVGTVYAVFVGIGAAGTVIVDMLFINHVISLMKLLFIILLIIGIIGLKLSTDDQSEGGL . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 27141 27470 . - . GCA_005502385.1_01936_mRNA GCA_005502385.1_01936 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MQWLKVILSGLIEVVWVTCLNYAHNTFTWLITLLFIALSFYLMLSATKQLPVGTVYAVFVGIGAAGTVIVDMLFINHVISLMKLLFIILLIIGIIGLKLSTDDQSEGGL . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 27141 27470 . - 0 GCA_005502385.1_01936 GCA_005502385.1_01936_gene,GCA_005502385.1_01936_mRNA GCA_005502385.1_01936 putative guanidinium efflux system subunit GdnC GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MQWLKVILSGLIEVVWVTCLNYAHNTFTWLITLLFIALSFYLMLSATKQLPVGTVYAVFVGIGAAGTVIVDMLFINHVISLMKLLFIILLIIGIIGLKLSTDDQSEGGL persistent 109 qacE QacE family quaternary ammonium compound efflux SMR transporter WP_048681895.1 UPI0006602FE7 UniRef100_UPI0006602FE7,UniRef50_B9DLW7,UniRef90_A0A974KZH4 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 27675 27815 . - . GCA_005502385.1_01937_gene GCA_005502385.1_01937 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAYVESVNSDGSITISEMNYTGGAYVTDTRTISASEVSAYNYIHLS . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 27675 27815 . - . GCA_005502385.1_01937_mRNA GCA_005502385.1_01937 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAYVESVNSDGSITISEMNYTGGAYVTDTRTISASEVSAYNYIHLS . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 27675 27815 . - 0 GCA_005502385.1_01937 GCA_005502385.1_01937_gene,GCA_005502385.1_01937_mRNA GCA_005502385.1_01937 putative autolysin SsaALP GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAYVESVNSDGSITISEMNYTGGAYVTDTRTISASEVSAYNYIHLS persistent 46 hypothetical protein . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 28372 29442 . + . GCA_005502385.1_01938_gene GCA_005502385.1_01938 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKIAIVGSGNGAVTAAVDMVNQGHEVKLYCRNSSIHKFDRALEKGGFDFNNEGHETFVPFTNISDDIEYVLKDAEVIQVVIPSSYIEYYAKVMSHYITAEQIIFFNIAAAMGSIRFMNVLEERHINIQPKYAEANTLTYGTRVDFEEARVDLSLNVRKVFFSTYNKRELNECFDKVSQLYPQLVKEESLWKTNLENGNPEVHPAPTLLNVGRIDYADTFALYKEGITKHTVRLLHAVELERLTLGRKLGFELLTAKEARIQRGYLERKDEDEPLNRLFNTSPVFSQIPGPNSVENRYLTEDIAYGLVLWSSLGREIGVDTPNIDAIITIASTILERDFFNEGLTVEELGLDKLGLK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 28372 29442 . + . GCA_005502385.1_01938_mRNA GCA_005502385.1_01938 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKIAIVGSGNGAVTAAVDMVNQGHEVKLYCRNSSIHKFDRALEKGGFDFNNEGHETFVPFTNISDDIEYVLKDAEVIQVVIPSSYIEYYAKVMSHYITAEQIIFFNIAAAMGSIRFMNVLEERHINIQPKYAEANTLTYGTRVDFEEARVDLSLNVRKVFFSTYNKRELNECFDKVSQLYPQLVKEESLWKTNLENGNPEVHPAPTLLNVGRIDYADTFALYKEGITKHTVRLLHAVELERLTLGRKLGFELLTAKEARIQRGYLERKDEDEPLNRLFNTSPVFSQIPGPNSVENRYLTEDIAYGLVLWSSLGREIGVDTPNIDAIITIASTILERDFFNEGLTVEELGLDKLGLK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 28372 29442 . + 0 GCA_005502385.1_01938 GCA_005502385.1_01938_gene,GCA_005502385.1_01938_mRNA GCA_005502385.1_01938 Opine dehydrogenase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKIAIVGSGNGAVTAAVDMVNQGHEVKLYCRNSSIHKFDRALEKGGFDFNNEGHETFVPFTNISDDIEYVLKDAEVIQVVIPSSYIEYYAKVMSHYITAEQIIFFNIAAAMGSIRFMNVLEERHINIQPKYAEANTLTYGTRVDFEEARVDLSLNVRKVFFSTYNKRELNECFDKVSQLYPQLVKEESLWKTNLENGNPEVHPAPTLLNVGRIDYADTFALYKEGITKHTVRLLHAVELERLTLGRKLGFELLTAKEARIQRGYLERKDEDEPLNRLFNTSPVFSQIPGPNSVENRYLTEDIAYGLVLWSSLGREIGVDTPNIDAIITIASTILERDFFNEGLTVEELGLDKLGLK persistent 356 6-phosphogluconate dehydrogenase, decarboxylating 1.5.1.28 WP_002448510.1 UPI00019FC1A6 UniRef100_A0A1L8Y7X7,UniRef50_A0A7Z7QNB8,UniRef90_A0A1L8Y7X7 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 29499 30884 . + . GCA_005502385.1_01939_gene GCA_005502385.1_01939 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKRKPTFLEAISTIIVMVIVVTIGFIKFNIPIQVLLLIASTYAAFIAMRVGLKWKDLEEGITHRLTTAMPAIFIILAVGIIVGSWMYAGTVPALIYYGLKFLNPSYFLISAFIISAICSLATGTAWGSASTAGIALISIGSQLGINQGMAAGAIIAGAVFGDKMSPLSDTTNLAALVTKVNIFSHIRAMMWTTIPASIIGLIVWFFAGLNSQGNVNTKQIKVLLNELSSIYNINFFVWIPLIVIIICLIFKISTVPSMLVSALSAILIGKFNNGFKFVDGFKATFDGFTSSMTGHSHVTENAKTLIEQGGMMSMTQIIVTIFCGYAFAGIVEKSGCLDVMLQTVAKGVKSVGTLVLITVLSSLMLVFAAGVASIVIIMVGVLMKDMFEDMNLDRSNLSRTLEDSSTMVLPLIPWGTSGIYYAQQLGVSVDQFFIWAVPCYLCSILAIIYGFTGIGIRKKIN . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 29499 30884 . + . GCA_005502385.1_01939_mRNA GCA_005502385.1_01939 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKRKPTFLEAISTIIVMVIVVTIGFIKFNIPIQVLLLIASTYAAFIAMRVGLKWKDLEEGITHRLTTAMPAIFIILAVGIIVGSWMYAGTVPALIYYGLKFLNPSYFLISAFIISAICSLATGTAWGSASTAGIALISIGSQLGINQGMAAGAIIAGAVFGDKMSPLSDTTNLAALVTKVNIFSHIRAMMWTTIPASIIGLIVWFFAGLNSQGNVNTKQIKVLLNELSSIYNINFFVWIPLIVIIICLIFKISTVPSMLVSALSAILIGKFNNGFKFVDGFKATFDGFTSSMTGHSHVTENAKTLIEQGGMMSMTQIIVTIFCGYAFAGIVEKSGCLDVMLQTVAKGVKSVGTLVLITVLSSLMLVFAAGVASIVIIMVGVLMKDMFEDMNLDRSNLSRTLEDSSTMVLPLIPWGTSGIYYAQQLGVSVDQFFIWAVPCYLCSILAIIYGFTGIGIRKKIN . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 29499 30884 . + 0 GCA_005502385.1_01939 GCA_005502385.1_01939_gene,GCA_005502385.1_01939_mRNA GCA_005502385.1_01939 Malate-2H(+)/Na(+)-lactate antiporter GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKRKPTFLEAISTIIVMVIVVTIGFIKFNIPIQVLLLIASTYAAFIAMRVGLKWKDLEEGITHRLTTAMPAIFIILAVGIIVGSWMYAGTVPALIYYGLKFLNPSYFLISAFIISAICSLATGTAWGSASTAGIALISIGSQLGINQGMAAGAIIAGAVFGDKMSPLSDTTNLAALVTKVNIFSHIRAMMWTTIPASIIGLIVWFFAGLNSQGNVNTKQIKVLLNELSSIYNINFFVWIPLIVIIICLIFKISTVPSMLVSALSAILIGKFNNGFKFVDGFKATFDGFTSSMTGHSHVTENAKTLIEQGGMMSMTQIIVTIFCGYAFAGIVEKSGCLDVMLQTVAKGVKSVGTLVLITVLSSLMLVFAAGVASIVIIMVGVLMKDMFEDMNLDRSNLSRTLEDSSTMVLPLIPWGTSGIYYAQQLGVSVDQFFIWAVPCYLCSILAIIYGFTGIGIRKKIN persistent 461 nhaC Na+/H+ antiporter NhaC GO:0006814,GO:0015297,GO:0015385,GO:0016020,GO:1902600 WP_048680488.1 UPI00065FD1D2 UniRef100_UPI00065FD1D2,UniRef50_A0A291JHU7,UniRef90_A0A3S7GZQ9 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 31187 31969 . - . GCA_005502385.1_01940_gene GCA_005502385.1_01940 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKKIATATIATAGVAAIAIAGQGHEAHAAEQGYNPNDPTSYSYSYTIDQQGNYHYTWKGNWSPDRLNHSNYNYNYNYNTYNNYSNTNSTYSYNNYHTNNSNQVASNPTQSYTTNNQQTGGLGSASASTSNSNVKVTTVTAPSSTGVSISNSVSSGRNYYTSGQCTYYVYDRVGGKIGSTWGNANNWANAAASAGYTVNNRPSAGAIMQSTAGAYGHVAYVESVNSNGSITVSEMNYGHGVGVVTSRTLSSSEAASYNFIH . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 31187 31969 . - . GCA_005502385.1_01940_mRNA GCA_005502385.1_01940 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKKIATATIATAGVAAIAIAGQGHEAHAAEQGYNPNDPTSYSYSYTIDQQGNYHYTWKGNWSPDRLNHSNYNYNYNYNTYNNYSNTNSTYSYNNYHTNNSNQVASNPTQSYTTNNQQTGGLGSASASTSNSNVKVTTVTAPSSTGVSISNSVSSGRNYYTSGQCTYYVYDRVGGKIGSTWGNANNWANAAASAGYTVNNRPSAGAIMQSTAGAYGHVAYVESVNSNGSITVSEMNYGHGVGVVTSRTLSSSEAASYNFIH . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 31187 31969 . - 0 GCA_005502385.1_01940 GCA_005502385.1_01940_gene,GCA_005502385.1_01940_mRNA GCA_005502385.1_01940 Staphylococcal secretory antigen SsaA GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKKIATATIATAGVAAIAIAGQGHEAHAAEQGYNPNDPTSYSYSYTIDQQGNYHYTWKGNWSPDRLNHSNYNYNYNYNTYNNYSNTNSTYSYNNYHTNNSNQVASNPTQSYTTNNQQTGGLGSASASTSNSNVKVTTVTAPSSTGVSISNSVSSGRNYYTSGQCTYYVYDRVGGKIGSTWGNANNWANAAASAGYTVNNRPSAGAIMQSTAGAYGHVAYVESVNSNGSITVSEMNYGHGVGVVTSRTLSSSEAASYNFIH persistent 260 CHAP domain-containing protein WP_049420000.1 UPI00066C5C80 UniRef100_UPI00066C5C80,UniRef50_Q2G2J2,UniRef90_A0A974KXY5 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 32587 33441 . + . GCA_005502385.1_01941_gene GCA_005502385.1_01941 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MIDNFSVKLLKNTRIIKQKESNIKLIYWLKGSGKINLDLDTYNMKKRDLVFIMLNDLYSIEGETNSVIAIIEISFTDYLRFADDYIRQKGYKFSSIERKQLESFIINLLEFESRKPRLPHIRDKLVKHLCVELGYIQRKHRQNYKLDNPLVDEVHEYIIEHHHEKINKQALANSLDMSNKELSQVIKFHTPYHNIAQYINDIRLKLCLLDILDSSEFIQDIAYKHGFNHFPRFIALFSKKYGMTPGQARKKQFAPIYKTTETVEISLDYEAQLLIAEAKSNYHT . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 32587 33441 . + . GCA_005502385.1_01941_mRNA GCA_005502385.1_01941 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MIDNFSVKLLKNTRIIKQKESNIKLIYWLKGSGKINLDLDTYNMKKRDLVFIMLNDLYSIEGETNSVIAIIEISFTDYLRFADDYIRQKGYKFSSIERKQLESFIINLLEFESRKPRLPHIRDKLVKHLCVELGYIQRKHRQNYKLDNPLVDEVHEYIIEHHHEKINKQALANSLDMSNKELSQVIKFHTPYHNIAQYINDIRLKLCLLDILDSSEFIQDIAYKHGFNHFPRFIALFSKKYGMTPGQARKKQFAPIYKTTETVEISLDYEAQLLIAEAKSNYHT . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 32587 33441 . + 0 GCA_005502385.1_01941 GCA_005502385.1_01941_gene,GCA_005502385.1_01941_mRNA GCA_005502385.1_01941 HTH-type transcriptional activator RhaS GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MIDNFSVKLLKNTRIIKQKESNIKLIYWLKGSGKINLDLDTYNMKKRDLVFIMLNDLYSIEGETNSVIAIIEISFTDYLRFADDYIRQKGYKFSSIERKQLESFIINLLEFESRKPRLPHIRDKLVKHLCVELGYIQRKHRQNYKLDNPLVDEVHEYIIEHHHEKINKQALANSLDMSNKELSQVIKFHTPYHNIAQYINDIRLKLCLLDILDSSEFIQDIAYKHGFNHFPRFIALFSKKYGMTPGQARKKQFAPIYKTTETVEISLDYEAQLLIAEAKSNYHT persistent 284 araC AraC family transcriptional regulator WP_017174879.1 UPI00035FFCE0 UniRef100_A0A3S7GWQ4,UniRef50_A0A2A1KD86,UniRef90_A0A3S7GWQ4 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 33619 34347 . + . GCA_005502385.1_01942_gene GCA_005502385.1_01942 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTKNDMDVLLFYLLFYKAVDELLKYSKNLNIEHLNVLYAIIDYHKTSHQGMDIETLMKKTYLSKRTLLYLVSHLYHENWIFKSYDANDQRRLRILPVEMYERKMNHLLLEIGELLENNYLKTSIKNMNYCKLTYLITIYKVLSKIEKNIKHYQLSLNDLLVLGIIWLNQNDISLKSINYFSRCQSININLVIKRLQQSGYILKKRDDLDERRVCIKLNMSKKKEIHDILSHCSKMIKKELTL . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 33619 34347 . + . GCA_005502385.1_01942_mRNA GCA_005502385.1_01942 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTKNDMDVLLFYLLFYKAVDELLKYSKNLNIEHLNVLYAIIDYHKTSHQGMDIETLMKKTYLSKRTLLYLVSHLYHENWIFKSYDANDQRRLRILPVEMYERKMNHLLLEIGELLENNYLKTSIKNMNYCKLTYLITIYKVLSKIEKNIKHYQLSLNDLLVLGIIWLNQNDISLKSINYFSRCQSININLVIKRLQQSGYILKKRDDLDERRVCIKLNMSKKKEIHDILSHCSKMIKKELTL . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 33619 34347 . + 0 GCA_005502385.1_01942 GCA_005502385.1_01942_gene,GCA_005502385.1_01942_mRNA GCA_005502385.1_01942 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTKNDMDVLLFYLLFYKAVDELLKYSKNLNIEHLNVLYAIIDYHKTSHQGMDIETLMKKTYLSKRTLLYLVSHLYHENWIFKSYDANDQRRLRILPVEMYERKMNHLLLEIGELLENNYLKTSIKNMNYCKLTYLITIYKVLSKIEKNIKHYQLSLNDLLVLGIIWLNQNDISLKSINYFSRCQSININLVIKRLQQSGYILKKRDDLDERRVCIKLNMSKKKEIHDILSHCSKMIKKELTL persistent 242 marR MarR family transcriptional regulator WP_017174878.1 UPI0003200466 UniRef100_A0A3S7GWJ5,UniRef50_A0A3S7GWJ5,UniRef90_A0A3S7GWJ5 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 34629 34973 . + . GCA_005502385.1_01943_gene GCA_005502385.1_01943 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MGQIKDINDLVNATFQVKKFFKDTKKKYNLNYEEIYILNYIVKSKKDEITSKEIATYSEFKPYYLTKALQKLKDLQLLSKKRSIQDERTVIVYVTKEQRERINALIAELEKYIQ . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 34629 34973 . + . GCA_005502385.1_01943_mRNA GCA_005502385.1_01943 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MGQIKDINDLVNATFQVKKFFKDTKKKYNLNYEEIYILNYIVKSKKDEITSKEIATYSEFKPYYLTKALQKLKDLQLLSKKRSIQDERTVIVYVTKEQRERINALIAELEKYIQ . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 34629 34973 . + 0 GCA_005502385.1_01943 GCA_005502385.1_01943_gene,GCA_005502385.1_01943_mRNA GCA_005502385.1_01943 HTH-type transcriptional regulator SarR GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MGQIKDINDLVNATFQVKKFFKDTKKKYNLNYEEIYILNYIVKSKKDEITSKEIATYSEFKPYYLTKALQKLKDLQLLSKKRSIQDERTVIVYVTKEQRERINALIAELEKYIQ persistent 114 sarR SarR protein WP_002448494.1 UPI00019FC1AB UniRef100_A0A657M7G1,UniRef50_A0A654BPX8,UniRef90_A0A380FWU5 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 35119 36264 . + . GCA_005502385.1_01944_gene GCA_005502385.1_01944 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLDSFLISSDIQRKWIKKFKTIEDTFKQRAAKEDIDSKFPFDNIKWLVEEGYSVLTLPKSYGGEGATIEDMVVLQSYLGAIDGATALSIGWHLSVVGQLYQQHMWSQTMLDQFAKEVKNGALVNRAVSEADTGSPTRGGRPATHAIKTKDGYKLNGVKTFTSMSKALTHYIVAAFVEDIQEVGFFLIPRESKGLEIADNWNMLGMRATESHDLVLNDVIVPFENFVETKHKPQPNGWILHIPSVYLGIAQAARDYAIEFAKTHSPNSIDGTIATLPTVQQNVGKMESLLLSARHFLWSTARGYNQYNETLNIWNETSASKILVMNQGLEVVDLAMRIVGAKSLEMDRPLQRYYRNMRAGLHNPPMEDAAYTNIAKSILDLM . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 35119 36264 . + . GCA_005502385.1_01944_mRNA GCA_005502385.1_01944 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLDSFLISSDIQRKWIKKFKTIEDTFKQRAAKEDIDSKFPFDNIKWLVEEGYSVLTLPKSYGGEGATIEDMVVLQSYLGAIDGATALSIGWHLSVVGQLYQQHMWSQTMLDQFAKEVKNGALVNRAVSEADTGSPTRGGRPATHAIKTKDGYKLNGVKTFTSMSKALTHYIVAAFVEDIQEVGFFLIPRESKGLEIADNWNMLGMRATESHDLVLNDVIVPFENFVETKHKPQPNGWILHIPSVYLGIAQAARDYAIEFAKTHSPNSIDGTIATLPTVQQNVGKMESLLLSARHFLWSTARGYNQYNETLNIWNETSASKILVMNQGLEVVDLAMRIVGAKSLEMDRPLQRYYRNMRAGLHNPPMEDAAYTNIAKSILDLM . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 35119 36264 . + 0 GCA_005502385.1_01944 GCA_005502385.1_01944_gene,GCA_005502385.1_01944_mRNA GCA_005502385.1_01944 Putative acyl-CoA dehydrogenase YdbM GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLDSFLISSDIQRKWIKKFKTIEDTFKQRAAKEDIDSKFPFDNIKWLVEEGYSVLTLPKSYGGEGATIEDMVVLQSYLGAIDGATALSIGWHLSVVGQLYQQHMWSQTMLDQFAKEVKNGALVNRAVSEADTGSPTRGGRPATHAIKTKDGYKLNGVKTFTSMSKALTHYIVAAFVEDIQEVGFFLIPRESKGLEIADNWNMLGMRATESHDLVLNDVIVPFENFVETKHKPQPNGWILHIPSVYLGIAQAARDYAIEFAKTHSPNSIDGTIATLPTVQQNVGKMESLLLSARHFLWSTARGYNQYNETLNIWNETSASKILVMNQGLEVVDLAMRIVGAKSLEMDRPLQRYYRNMRAGLHNPPMEDAAYTNIAKSILDLM persistent 381 Acyl-CoA dehydrogenase WP_049419999.1 UPI00066ED4F1 UniRef100_UPI00066ED4F1,UniRef50_A0A380FY69,UniRef90_A0A3S7GWQ9 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 36357 37298 . + . GCA_005502385.1_01945_gene GCA_005502385.1_01945 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTKIYFNHDGGVDDLISLFLLLQMDNIELVGVSTIGADCYLEPSLSASCKIINRFSNLSIDVAPSYERGVNPFPKDWRMHAFFMDALPILNEKWIDKRSVTSTFEAYEDIINVLNNSKEKVTLLFTGPLTDLAKAIKHDKAIVNNIEKLVWMGGTFLEKGNVEEPEHDGTAEWNAFWDPEAVKTIFDTSIKIEMVALESTNQVPLTPAIRQMWANQRQFIGVDFLGISYAAVPPLTHFVTNSTYFLWDVLTTAQIGKESLTDSIELKVDVYTKGPSQGRTYKSDDGRIVRVVNHVNHDEFFNYITFLAKKVSH . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 36357 37298 . + . GCA_005502385.1_01945_mRNA GCA_005502385.1_01945 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTKIYFNHDGGVDDLISLFLLLQMDNIELVGVSTIGADCYLEPSLSASCKIINRFSNLSIDVAPSYERGVNPFPKDWRMHAFFMDALPILNEKWIDKRSVTSTFEAYEDIINVLNNSKEKVTLLFTGPLTDLAKAIKHDKAIVNNIEKLVWMGGTFLEKGNVEEPEHDGTAEWNAFWDPEAVKTIFDTSIKIEMVALESTNQVPLTPAIRQMWANQRQFIGVDFLGISYAAVPPLTHFVTNSTYFLWDVLTTAQIGKESLTDSIELKVDVYTKGPSQGRTYKSDDGRIVRVVNHVNHDEFFNYITFLAKKVSH . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 36357 37298 . + 0 GCA_005502385.1_01945 GCA_005502385.1_01945_gene,GCA_005502385.1_01945_mRNA GCA_005502385.1_01945 Pyrimidine-specific ribonucleoside hydrolase RihB GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTKIYFNHDGGVDDLISLFLLLQMDNIELVGVSTIGADCYLEPSLSASCKIINRFSNLSIDVAPSYERGVNPFPKDWRMHAFFMDALPILNEKWIDKRSVTSTFEAYEDIINVLNNSKEKVTLLFTGPLTDLAKAIKHDKAIVNNIEKLVWMGGTFLEKGNVEEPEHDGTAEWNAFWDPEAVKTIFDTSIKIEMVALESTNQVPLTPAIRQMWANQRQFIGVDFLGISYAAVPPLTHFVTNSTYFLWDVLTTAQIGKESLTDSIELKVDVYTKGPSQGRTYKSDDGRIVRVVNHVNHDEFFNYITFLAKKVSH persistent 313 Purine nucleosidase UniRef50_A0A2S6DCG5,UniRef90_A0A974QNS8 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 37373 37918 . + . GCA_005502385.1_01946_gene GCA_005502385.1_01946 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSTKNLVYTALMTAVICILGLVPGIPLPFMPVPIVLQNIGVFLAGVILGRKYGALSVIIFLLLAATGLPLLSGGRGGIGVFAGPSAGFLFLYPVVAYLIGLVRDRFKNHINFFTLFIGMLVFGVLLLDIVGTIIMGFIIHMPISKAFLLSFTFVPGDIIKAIIASLIGTTLLNHSRFKNLI . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 37373 37918 . + . GCA_005502385.1_01946_mRNA GCA_005502385.1_01946 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSTKNLVYTALMTAVICILGLVPGIPLPFMPVPIVLQNIGVFLAGVILGRKYGALSVIIFLLLAATGLPLLSGGRGGIGVFAGPSAGFLFLYPVVAYLIGLVRDRFKNHINFFTLFIGMLVFGVLLLDIVGTIIMGFIIHMPISKAFLLSFTFVPGDIIKAIIASLIGTTLLNHSRFKNLI . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 37373 37918 . + 0 GCA_005502385.1_01946 GCA_005502385.1_01946_gene,GCA_005502385.1_01946_mRNA GCA_005502385.1_01946 Biotin transporter BioY GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSTKNLVYTALMTAVICILGLVPGIPLPFMPVPIVLQNIGVFLAGVILGRKYGALSVIIFLLLAATGLPLLSGGRGGIGVFAGPSAGFLFLYPVVAYLIGLVRDRFKNHINFFTLFIGMLVFGVLLLDIVGTIIMGFIIHMPISKAFLLSFTFVPGDIIKAIIASLIGTTLLNHSRFKNLI persistent 181 Biotin transporter WP_070647313.1 UPI0008A1C772 UniRef100_UPI0008A1C772,UniRef50_A0A0E7RMI7,UniRef90_A0A3S7H053 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 37954 38718 . + . GCA_005502385.1_01947_gene GCA_005502385.1_01947 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTHITMKQIKENGKIYLENELNIIYLTPSDPITYHMNKWQYKTLPSINQWYADMEKQRILHKKQHSSHLSFTFPENQLLHSTWLEAIRNEGFQLKLLELYAIDSATLKQFESNIQVDIEPVTSFNMEDYLSVYNEFSKPYGEAFVKESEERTREAILNQIDDVTRIVAYYLHKPVGILDVIVTDETVEIDGFGVLEDYRHKGIGTTMQSYVGHLAGSRPVILVADGDDTAKDMYIKQGYIFQSFQYQIVKEDAI . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 37954 38718 . + . GCA_005502385.1_01947_mRNA GCA_005502385.1_01947 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTHITMKQIKENGKIYLENELNIIYLTPSDPITYHMNKWQYKTLPSINQWYADMEKQRILHKKQHSSHLSFTFPENQLLHSTWLEAIRNEGFQLKLLELYAIDSATLKQFESNIQVDIEPVTSFNMEDYLSVYNEFSKPYGEAFVKESEERTREAILNQIDDVTRIVAYYLHKPVGILDVIVTDETVEIDGFGVLEDYRHKGIGTTMQSYVGHLAGSRPVILVADGDDTAKDMYIKQGYIFQSFQYQIVKEDAI . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 37954 38718 . + 0 GCA_005502385.1_01947 GCA_005502385.1_01947_gene,GCA_005502385.1_01947_mRNA GCA_005502385.1_01947 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTHITMKQIKENGKIYLENELNIIYLTPSDPITYHMNKWQYKTLPSINQWYADMEKQRILHKKQHSSHLSFTFPENQLLHSTWLEAIRNEGFQLKLLELYAIDSATLKQFESNIQVDIEPVTSFNMEDYLSVYNEFSKPYGEAFVKESEERTREAILNQIDDVTRIVAYYLHKPVGILDVIVTDETVEIDGFGVLEDYRHKGIGTTMQSYVGHLAGSRPVILVADGDDTAKDMYIKQGYIFQSFQYQIVKEDAI persistent 254 Acetyltransferase WP_017174873.1 UPI00030303F7 UniRef100_A0A3S7GW46,UniRef50_A0A3S7GW46,UniRef90_A0A3S7GW46 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 38757 39551 . - . GCA_005502385.1_01948_gene GCA_005502385.1_01948 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MDKDAVQNQPIIRYEDEQLIETEDSYVTEFPLTIMVNGKEFATVICSPTHLEELVIGFLASEGAIYKKEEIKHLQIDDSKGFAHVELTKSLSDRFEYSTKRMVASCCGKSREFYFQNDAAIAKTSMSNIILTPRQILNMMTGLQSASTLFKQTGGLHNAAISDGEAFFEHRQDIGRHNALDKLYGFCLTHQIPVRNKVLIFSGRISSEILLKAAKIGVGVILSKSAPTTLAITLAHDLNITAIGFIRGDSFNIYSHPERIKGVK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 38757 39551 . - . GCA_005502385.1_01948_mRNA GCA_005502385.1_01948 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MDKDAVQNQPIIRYEDEQLIETEDSYVTEFPLTIMVNGKEFATVICSPTHLEELVIGFLASEGAIYKKEEIKHLQIDDSKGFAHVELTKSLSDRFEYSTKRMVASCCGKSREFYFQNDAAIAKTSMSNIILTPRQILNMMTGLQSASTLFKQTGGLHNAAISDGEAFFEHRQDIGRHNALDKLYGFCLTHQIPVRNKVLIFSGRISSEILLKAAKIGVGVILSKSAPTTLAITLAHDLNITAIGFIRGDSFNIYSHPERIKGVK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 38757 39551 . - 0 GCA_005502385.1_01948 GCA_005502385.1_01948_gene,GCA_005502385.1_01948_mRNA GCA_005502385.1_01948 Sulfur carrier protein FdhD GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MDKDAVQNQPIIRYEDEQLIETEDSYVTEFPLTIMVNGKEFATVICSPTHLEELVIGFLASEGAIYKKEEIKHLQIDDSKGFAHVELTKSLSDRFEYSTKRMVASCCGKSREFYFQNDAAIAKTSMSNIILTPRQILNMMTGLQSASTLFKQTGGLHNAAISDGEAFFEHRQDIGRHNALDKLYGFCLTHQIPVRNKVLIFSGRISSEILLKAAKIGVGVILSKSAPTTLAITLAHDLNITAIGFIRGDSFNIYSHPERIKGVK persistent 264 fdhD formate dehydrogenase accessory sulfurtransferase FdhD GO:0009061,GO:0009326,GO:0015942,GO:0016783 WP_017174872.1 UPI0002D66B77 UniRef100_A0A3S7GWA6,UniRef50_A8FIA1,UniRef90_A0A3S7GWA6 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 39739 40530 . + . GCA_005502385.1_01949_gene GCA_005502385.1_01949 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTVKRLLAVLGTFIIIIAGCSNSKDNDNSKQSSKSNNSDNPKTELKVSAAASLSDVSKALKKEFEKTHKNVNVTFNYGGSGALRQQIEKGAPTDVFMSANTKDVDMLKKHNQAHNTYKYAHNQLVLIGDKNSDQASVKDLKDNEKLAIGEVKTVPAGKYAKQYLDNQHLYSDVKDKIVYAKDVKQVLNYVEKGNTQMGFVYETDLYTNNERTDKVNEIKKADLKKPITYEAGATSDNKFAKEWIEFLKSKKAKDILKEYHFKV . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 39739 40530 . + . GCA_005502385.1_01949_mRNA GCA_005502385.1_01949 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTVKRLLAVLGTFIIIIAGCSNSKDNDNSKQSSKSNNSDNPKTELKVSAAASLSDVSKALKKEFEKTHKNVNVTFNYGGSGALRQQIEKGAPTDVFMSANTKDVDMLKKHNQAHNTYKYAHNQLVLIGDKNSDQASVKDLKDNEKLAIGEVKTVPAGKYAKQYLDNQHLYSDVKDKIVYAKDVKQVLNYVEKGNTQMGFVYETDLYTNNERTDKVNEIKKADLKKPITYEAGATSDNKFAKEWIEFLKSKKAKDILKEYHFKV . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 39739 40530 . + 0 GCA_005502385.1_01949 GCA_005502385.1_01949_gene,GCA_005502385.1_01949_mRNA GCA_005502385.1_01949 Molybdate-binding protein ModA GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTVKRLLAVLGTFIIIIAGCSNSKDNDNSKQSSKSNNSDNPKTELKVSAAASLSDVSKALKKEFEKTHKNVNVTFNYGGSGALRQQIEKGAPTDVFMSANTKDVDMLKKHNQAHNTYKYAHNQLVLIGDKNSDQASVKDLKDNEKLAIGEVKTVPAGKYAKQYLDNQHLYSDVKDKIVYAKDVKQVLNYVEKGNTQMGFVYETDLYTNNERTDKVNEIKKADLKKPITYEAGATSDNKFAKEWIEFLKSKKAKDILKEYHFKV persistent 263 modA molybdate ABC transporter substrate-binding protein GO:0015412,GO:0015689,GO:0030288,GO:0030973,GO:0055052 WP_017174871.1 UPI0002F15964 UniRef100_A0A3S7GZR3,UniRef50_Q4L8E3,UniRef90_A0A6N0I255 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 40542 41213 . + . GCA_005502385.1_01950_gene GCA_005502385.1_01950 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MPDLTPLWISIKVGFISTIIVSILGIFICRTLYKRKGHATQFLESLILLPIVLPPTVLGFILIIVFSPRTFVGQFFQNVLHLPVVFTMTGAVIASVIVSFPLMYQHTIQGFRSINPKMLNTARTMGASERKIFYRLILPLSKRSIIAGIMMSFARAIGEFGATLMVAGYIPNKTNTLPLEIYFLVEQGKENQAWLWVLVLVAFSITVISMLNFANRDKVQEVD . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 40542 41213 . + . GCA_005502385.1_01950_mRNA GCA_005502385.1_01950 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MPDLTPLWISIKVGFISTIIVSILGIFICRTLYKRKGHATQFLESLILLPIVLPPTVLGFILIIVFSPRTFVGQFFQNVLHLPVVFTMTGAVIASVIVSFPLMYQHTIQGFRSINPKMLNTARTMGASERKIFYRLILPLSKRSIIAGIMMSFARAIGEFGATLMVAGYIPNKTNTLPLEIYFLVEQGKENQAWLWVLVLVAFSITVISMLNFANRDKVQEVD . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 40542 41213 . + 0 GCA_005502385.1_01950 GCA_005502385.1_01950_gene,GCA_005502385.1_01950_mRNA GCA_005502385.1_01950 Molybdenum transport system permease protein ModB GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MPDLTPLWISIKVGFISTIIVSILGIFICRTLYKRKGHATQFLESLILLPIVLPPTVLGFILIIVFSPRTFVGQFFQNVLHLPVVFTMTGAVIASVIVSFPLMYQHTIQGFRSINPKMLNTARTMGASERKIFYRLILPLSKRSIIAGIMMSFARAIGEFGATLMVAGYIPNKTNTLPLEIYFLVEQGKENQAWLWVLVLVAFSITVISMLNFANRDKVQEVD persistent 223 modB molybdate ABC transporter permease subunit GO:0005886,GO:0015412,GO:0015689,GO:0055052 WP_017174870.1 UPI000312C7BF UniRef100_A0A4Q9WTR1,UniRef50_A0AAJ4SFQ7,UniRef90_A0AAE5JMA1 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 41214 41819 . + . GCA_005502385.1_01951_gene GCA_005502385.1_01951 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLQVKLQHQLKQTLIHINIEDTKAKIYAIQGPSGIGKTTILNIIAGLRQPDEAYINIDNHLLVDTENHINVKIQQRQIGYLFQDYQLFPNMTVLQNITFMTKQSKHIDELIQRLNISHLINQFPPTLSGGEAQRVALARTLSTKPNLILLDEPFSSLDDISRDEGIHLVKQIHEEWCIPIIFVTHSNYEAEVLADEIIQIK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 41214 41819 . + . GCA_005502385.1_01951_mRNA GCA_005502385.1_01951 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLQVKLQHQLKQTLIHINIEDTKAKIYAIQGPSGIGKTTILNIIAGLRQPDEAYINIDNHLLVDTENHINVKIQQRQIGYLFQDYQLFPNMTVLQNITFMTKQSKHIDELIQRLNISHLINQFPPTLSGGEAQRVALARTLSTKPNLILLDEPFSSLDDISRDEGIHLVKQIHEEWCIPIIFVTHSNYEAEVLADEIIQIK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 41214 41819 . + 0 GCA_005502385.1_01951 GCA_005502385.1_01951_gene,GCA_005502385.1_01951_mRNA GCA_005502385.1_01951 Sulfate/thiosulfate import ATP-binding protein CysA GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLQVKLQHQLKQTLIHINIEDTKAKIYAIQGPSGIGKTTILNIIAGLRQPDEAYINIDNHLLVDTENHINVKIQQRQIGYLFQDYQLFPNMTVLQNITFMTKQSKHIDELIQRLNISHLINQFPPTLSGGEAQRVALARTLSTKPNLILLDEPFSSLDDISRDEGIHLVKQIHEEWCIPIIFVTHSNYEAEVLADEIIQIK persistent 201 ATP-binding cassette domain-containing protein WP_017174869.1 UPI000313FA7A UniRef100_A0A4Q9WRJ1,UniRef50_A0A380G6T3,UniRef90_A0A657M4Q1 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 41921 42925 . + . GCA_005502385.1_01952_gene GCA_005502385.1_01952 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTQERYSRQILFKDIGEHGQQTINQKHVLIVGMGALGTHVAEGLVRAGIQELTIVDRDYIEYSNLQRQTLFTESDADRMMPKVVAAQDHLKHIRSDIKMNIYIEHVDAQFLEQYATSVDLIIDATDNFETRQLINDFSYRYRIPWIYGGVVQSTYVETAFIPGQTPCFNCLMPQLPVINLTCDTVGVIQPAVTMTTSFQLRDALKILIGKQIPTKLTYGDIWENTHCSFGYSKMRRDDCPTCGKNASFPYLYAHSTSYATLCGRDTVQYENKDITKKVLVDFLTALDIRYHENQYMLVFEFKKHRIVYFEGGRMLIHGTTKKSEAIHLINQLFG . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 41921 42925 . + . GCA_005502385.1_01952_mRNA GCA_005502385.1_01952 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTQERYSRQILFKDIGEHGQQTINQKHVLIVGMGALGTHVAEGLVRAGIQELTIVDRDYIEYSNLQRQTLFTESDADRMMPKVVAAQDHLKHIRSDIKMNIYIEHVDAQFLEQYATSVDLIIDATDNFETRQLINDFSYRYRIPWIYGGVVQSTYVETAFIPGQTPCFNCLMPQLPVINLTCDTVGVIQPAVTMTTSFQLRDALKILIGKQIPTKLTYGDIWENTHCSFGYSKMRRDDCPTCGKNASFPYLYAHSTSYATLCGRDTVQYENKDITKKVLVDFLTALDIRYHENQYMLVFEFKKHRIVYFEGGRMLIHGTTKKSEAIHLINQLFG . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 41921 42925 . + 0 GCA_005502385.1_01952 GCA_005502385.1_01952_gene,GCA_005502385.1_01952_mRNA GCA_005502385.1_01952 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTQERYSRQILFKDIGEHGQQTINQKHVLIVGMGALGTHVAEGLVRAGIQELTIVDRDYIEYSNLQRQTLFTESDADRMMPKVVAAQDHLKHIRSDIKMNIYIEHVDAQFLEQYATSVDLIIDATDNFETRQLINDFSYRYRIPWIYGGVVQSTYVETAFIPGQTPCFNCLMPQLPVINLTCDTVGVIQPAVTMTTSFQLRDALKILIGKQIPTKLTYGDIWENTHCSFGYSKMRRDDCPTCGKNASFPYLYAHSTSYATLCGRDTVQYENKDITKKVLVDFLTALDIRYHENQYMLVFEFKKHRIVYFEGGRMLIHGTTKKSEAIHLINQLFG persistent 334 moeB Molybdopterin biosynthesis protein MoeB WP_054105715.1 UPI0006B95643 UniRef100_UPI0006B95643,UniRef50_A0A380C5E9,UniRef90_A0A3S7GWK3 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 42939 43445 . + . GCA_005502385.1_01953_gene GCA_005502385.1_01953 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MHQHDNKEVKKTIQCAVLTISDTRNKETDKGGQLVQKCLKELNIEVTEEHYHIIKDDKEDIQSQIDEWLASDIDVIITTGGTGIAQRDVTIEAVKPLLDKEIEGFGELFRYLSYTEDVGTKALLSRALAGTVMSKLIFTLPGSTGAVKLAMTKLIIPELNHMVYELHK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 42939 43445 . + . GCA_005502385.1_01953_mRNA GCA_005502385.1_01953 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MHQHDNKEVKKTIQCAVLTISDTRNKETDKGGQLVQKCLKELNIEVTEEHYHIIKDDKEDIQSQIDEWLASDIDVIITTGGTGIAQRDVTIEAVKPLLDKEIEGFGELFRYLSYTEDVGTKALLSRALAGTVMSKLIFTLPGSTGAVKLAMTKLIIPELNHMVYELHK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 42939 43445 . + 0 GCA_005502385.1_01953 GCA_005502385.1_01953_gene,GCA_005502385.1_01953_mRNA GCA_005502385.1_01953 Molybdenum cofactor biosynthesis protein B GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MHQHDNKEVKKTIQCAVLTISDTRNKETDKGGQLVQKCLKELNIEVTEEHYHIIKDDKEDIQSQIDEWLASDIDVIITTGGTGIAQRDVTIEAVKPLLDKEIEGFGELFRYLSYTEDVGTKALLSRALAGTVMSKLIFTLPGSTGAVKLAMTKLIIPELNHMVYELHK persistent 168 Molybdenum cofactor biosynthesis protein B WP_017174867.1 UPI00037A51E7 UniRef100_A0A4V2KXB2,UniRef50_F9DRM9,UniRef90_A0A4V2KXB2 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 43533 44027 . - . GCA_005502385.1_01954_gene GCA_005502385.1_01954 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSNFTHINHQGNAKMVDVSNKSITKRIAKAHSSITVNETIYRQIIDNTNKKGNVLNTAQIAGIMAAKNTSTIIPMCHPLPLTGIDIEFSWNQANTPRHYQLSITATVSTTGKTGVEMEALTAASVTALTVYDMTKAADKGMIIGDTYLESKSGGKSGDYHRQLD . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 43533 44027 . - . GCA_005502385.1_01954_mRNA GCA_005502385.1_01954 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSNFTHINHQGNAKMVDVSNKSITKRIAKAHSSITVNETIYRQIIDNTNKKGNVLNTAQIAGIMAAKNTSTIIPMCHPLPLTGIDIEFSWNQANTPRHYQLSITATVSTTGKTGVEMEALTAASVTALTVYDMTKAADKGMIIGDTYLESKSGGKSGDYHRQLD . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 43533 44027 . - 0 GCA_005502385.1_01954 GCA_005502385.1_01954_gene,GCA_005502385.1_01954_mRNA GCA_005502385.1_01954 Cyclic pyranopterin monophosphate synthase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSNFTHINHQGNAKMVDVSNKSITKRIAKAHSSITVNETIYRQIIDNTNKKGNVLNTAQIAGIMAAKNTSTIIPMCHPLPLTGIDIEFSWNQANTPRHYQLSITATVSTTGKTGVEMEALTAASVTALTVYDMTKAADKGMIIGDTYLESKSGGKSGDYHRQLD persistent 164 moaC cyclic pyranopterin monophosphate synthase MoaC 4.6.1.17 GO:0006777,GO:0061799 WP_017174866.1 UPI0003186375 UniRef100_A0A8X8KEV8,UniRef50_Q2FVX9,UniRef90_A0A8X8KEV8 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 44170 45429 . + . GCA_005502385.1_01955_gene GCA_005502385.1_01955 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MVVEKRKPIPIKEAIERIVKQDIYTQQNNISLEDSLGYVLAEDIVATYDIPRFNKSPYDGFAIRSEDSAGAFSKNRKTFKVIDHIGAGTVSHKTVGENEAVRIMTGAQIPEGADAVVMFEQTVENGDTFTIRKPFEENENVSLKGEETKTGDIVLKKGQVINPGAIAVLATYGYTEVPVFLKPSIAVIATGSELLNVDEELQPGKIRNSNGPMIQALADKMRLTIEPYSIQQDDLESSIQVITKAMKDHDIVITTGGVSVGDYDFLPKIYKAIQAEVLFNKIAMRPGSVTTVAVANKTYLFGLSGNPSACFTGFELFVKPAVQHMMQAKAVYPQVVKATLMEDFAKANPFTRFIRATASFTHNCATVVPSGFNKSGAVVAIAHSNAMIMLPGGTRGFKAGHTVDVILTESNVFEEELSL . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 44170 45429 . + . GCA_005502385.1_01955_mRNA GCA_005502385.1_01955 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MVVEKRKPIPIKEAIERIVKQDIYTQQNNISLEDSLGYVLAEDIVATYDIPRFNKSPYDGFAIRSEDSAGAFSKNRKTFKVIDHIGAGTVSHKTVGENEAVRIMTGAQIPEGADAVVMFEQTVENGDTFTIRKPFEENENVSLKGEETKTGDIVLKKGQVINPGAIAVLATYGYTEVPVFLKPSIAVIATGSELLNVDEELQPGKIRNSNGPMIQALADKMRLTIEPYSIQQDDLESSIQVITKAMKDHDIVITTGGVSVGDYDFLPKIYKAIQAEVLFNKIAMRPGSVTTVAVANKTYLFGLSGNPSACFTGFELFVKPAVQHMMQAKAVYPQVVKATLMEDFAKANPFTRFIRATASFTHNCATVVPSGFNKSGAVVAIAHSNAMIMLPGGTRGFKAGHTVDVILTESNVFEEELSL . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 44170 45429 . + 0 GCA_005502385.1_01955 GCA_005502385.1_01955_gene,GCA_005502385.1_01955_mRNA GCA_005502385.1_01955 Molybdopterin molybdenumtransferase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MVVEKRKPIPIKEAIERIVKQDIYTQQNNISLEDSLGYVLAEDIVATYDIPRFNKSPYDGFAIRSEDSAGAFSKNRKTFKVIDHIGAGTVSHKTVGENEAVRIMTGAQIPEGADAVVMFEQTVENGDTFTIRKPFEENENVSLKGEETKTGDIVLKKGQVINPGAIAVLATYGYTEVPVFLKPSIAVIATGSELLNVDEELQPGKIRNSNGPMIQALADKMRLTIEPYSIQQDDLESSIQVITKAMKDHDIVITTGGVSVGDYDFLPKIYKAIQAEVLFNKIAMRPGSVTTVAVANKTYLFGLSGNPSACFTGFELFVKPAVQHMMQAKAVYPQVVKATLMEDFAKANPFTRFIRATASFTHNCATVVPSGFNKSGAVVAIAHSNAMIMLPGGTRGFKAGHTVDVILTESNVFEEELSL persistent 419 glp gephyrin-like molybdotransferase Glp GO:0006777,GO:0061599,GO:1990586 WP_017174865.1 UPI0003197353 UniRef100_UPI0003197353,UniRef50_Q5HLX6,UniRef90_A0A974KXX7 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 45426 45917 . + . GCA_005502385.1_01956_gene GCA_005502385.1_01956 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MILQIVGFKDSGKTTLLQQSITFLKSQGYHIVTIKHHGHEKDDITLQSSNVDHMKHFEAGADQSIVQGSAYQQTVTRRNQPSLEQLIKESVTISYDVILVEGFKNEDYDKIVVYKTQEELEELRLLTHVQYFYNYNNENALKNYEQWLLKWMKRKDEHKNETI . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 45426 45917 . + . GCA_005502385.1_01956_mRNA GCA_005502385.1_01956 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MILQIVGFKDSGKTTLLQQSITFLKSQGYHIVTIKHHGHEKDDITLQSSNVDHMKHFEAGADQSIVQGSAYQQTVTRRNQPSLEQLIKESVTISYDVILVEGFKNEDYDKIVVYKTQEELEELRLLTHVQYFYNYNNENALKNYEQWLLKWMKRKDEHKNETI . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 45426 45917 . + 0 GCA_005502385.1_01956 GCA_005502385.1_01956_gene,GCA_005502385.1_01956_mRNA GCA_005502385.1_01956 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MILQIVGFKDSGKTTLLQQSITFLKSQGYHIVTIKHHGHEKDDITLQSSNVDHMKHFEAGADQSIVQGSAYQQTVTRRNQPSLEQLIKESVTISYDVILVEGFKNEDYDKIVVYKTQEELEELRLLTHVQYFYNYNNENALKNYEQWLLKWMKRKDEHKNETI persistent 163 mobB molybdopterin-guanine dinucleotide biosynthesis protein B GO:0003824,GO:0005525,GO:0006777 WP_017174864.1 UPI000312AA1A UniRef100_A0A4Q9WRJ0,UniRef50_A0A380H3I1,UniRef90_A0A4Q9WRJ0 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 45904 46353 . + . GCA_005502385.1_01957_gene GCA_005502385.1_01957 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKQFEIVTNPIEPEQYRTFTLNEHQGAVVVFTGHVREWTKGVKTEYLEYEAYVPMAQKKLKQIGEEITQRWPGTITTIVHRIGPLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEVVPIWKKEIWEDGAEWQGHQRGDYSQATKGEA . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 45904 46353 . + . GCA_005502385.1_01957_mRNA GCA_005502385.1_01957 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKQFEIVTNPIEPEQYRTFTLNEHQGAVVVFTGHVREWTKGVKTEYLEYEAYVPMAQKKLKQIGEEITQRWPGTITTIVHRIGPLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEVVPIWKKEIWEDGAEWQGHQRGDYSQATKGEA . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 45904 46353 . + 0 GCA_005502385.1_01957 GCA_005502385.1_01957_gene,GCA_005502385.1_01957_mRNA GCA_005502385.1_01957 Molybdopterin synthase catalytic subunit GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKQFEIVTNPIEPEQYRTFTLNEHQGAVVVFTGHVREWTKGVKTEYLEYEAYVPMAQKKLKQIGEEITQRWPGTITTIVHRIGPLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEVVPIWKKEIWEDGAEWQGHQRGDYSQATKGEA persistent 149 Molybdopterin synthase catalytic subunit 2.8.1.12 WP_048762097.1 UPI0006616950 UniRef100_UPI0006616950,UniRef50_Q9K8I7,UniRef90_A0A6N0I243 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 46354 46587 . + . GCA_005502385.1_01958_gene GCA_005502385.1_01958 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MRVLYFAEIKEILEMNSEDIDLIEDITVETFKELLFERHPSIRDKKFQVAVNEEFVQLNDIVKQDDVVALIPPVSGG . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 46354 46587 . + . GCA_005502385.1_01958_mRNA GCA_005502385.1_01958 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MRVLYFAEIKEILEMNSEDIDLIEDITVETFKELLFERHPSIRDKKFQVAVNEEFVQLNDIVKQDDVVALIPPVSGG . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 46354 46587 . + 0 GCA_005502385.1_01958 GCA_005502385.1_01958_gene,GCA_005502385.1_01958_mRNA GCA_005502385.1_01958 Molybdopterin synthase sulfur carrier subunit GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MRVLYFAEIKEILEMNSEDIDLIEDITVETFKELLFERHPSIRDKKFQVAVNEEFVQLNDIVKQDDVVALIPPVSGG persistent 77 moaD molybdopterin converting factor subunit 1 GO:0003824,GO:0006777 WP_017174862.1 UPI000318F33E UniRef100_A0A4Q9WSM7,UniRef50_Q5HLX9,UniRef90_A0A4Q9WSM7 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 46590 47195 . + . GCA_005502385.1_01959_gene GCA_005502385.1_01959 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKAIILAGGHSKRFGSPKAFACIHGEMFYKRIINTLTETNLFDDIIISTNKQLKNEFEYKHIMVDEETHADKGPLSGIYTVMKHYNNEELFFVVSVDTPMITKEAISQLYQFTISQRMEHQADIIAYSDDDKPIPTIAFYSRGVISNIEKALNSNDYSLQHVYKNVITCFLDTKEVQPLKNWSKNINYQDDLNTLLHQIND . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 46590 47195 . + . GCA_005502385.1_01959_mRNA GCA_005502385.1_01959 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKAIILAGGHSKRFGSPKAFACIHGEMFYKRIINTLTETNLFDDIIISTNKQLKNEFEYKHIMVDEETHADKGPLSGIYTVMKHYNNEELFFVVSVDTPMITKEAISQLYQFTISQRMEHQADIIAYSDDDKPIPTIAFYSRGVISNIEKALNSNDYSLQHVYKNVITCFLDTKEVQPLKNWSKNINYQDDLNTLLHQIND . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 46590 47195 . + 0 GCA_005502385.1_01959 GCA_005502385.1_01959_gene,GCA_005502385.1_01959_mRNA GCA_005502385.1_01959 putative molybdenum cofactor guanylyltransferase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKAIILAGGHSKRFGSPKAFACIHGEMFYKRIINTLTETNLFDDIIISTNKQLKNEFEYKHIMVDEETHADKGPLSGIYTVMKHYNNEELFFVVSVDTPMITKEAISQLYQFTISQRMEHQADIIAYSDDDKPIPTIAFYSRGVISNIEKALNSNDYSLQHVYKNVITCFLDTKEVQPLKNWSKNINYQDDLNTLLHQIND persistent 201 mobA molybdenum cofactor guanylyltransferase MobA 2.7.7.77 WP_017174861.1 UPI000304D519 UniRef100_A0A3S7GZR8,UniRef50_Q5HLY0,UniRef90_A0A3S7GZR8 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 47210 48232 . + . GCA_005502385.1_01960_gene GCA_005502385.1_01960 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTIQIKDKLGRPIRDLRISVTDRCNFRCDYCMPKEIFGDDFVFLPKEELLTFDEITTIAKVYAELGVKKLRITGGEPLLRRDLYKLIEKLNHIEGIEDIGMTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDEVFQAINNRNIKASTILQQIDYAISIGFHVKVNVVIQKGINDDQILPMIEYFKDKHIQIRFIEFMDVGNDNGWNFSKVVTKEEMLSTIEEEFDIESLPPKYFGEVATYYRHKDNGAQFGLITSVSASFCSTCTRARLSSDGKFYGCLFSVIDGFDIKSLLRSGATHQKLKDTLISLWQARDDRYSDERTEQTVRNRQRKKINMNYIGG . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 47210 48232 . + . GCA_005502385.1_01960_mRNA GCA_005502385.1_01960 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTIQIKDKLGRPIRDLRISVTDRCNFRCDYCMPKEIFGDDFVFLPKEELLTFDEITTIAKVYAELGVKKLRITGGEPLLRRDLYKLIEKLNHIEGIEDIGMTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDEVFQAINNRNIKASTILQQIDYAISIGFHVKVNVVIQKGINDDQILPMIEYFKDKHIQIRFIEFMDVGNDNGWNFSKVVTKEEMLSTIEEEFDIESLPPKYFGEVATYYRHKDNGAQFGLITSVSASFCSTCTRARLSSDGKFYGCLFSVIDGFDIKSLLRSGATHQKLKDTLISLWQARDDRYSDERTEQTVRNRQRKKINMNYIGG . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 47210 48232 . + 0 GCA_005502385.1_01960 GCA_005502385.1_01960_gene,GCA_005502385.1_01960_mRNA GCA_005502385.1_01960 GTP 3'%2C8-cyclase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTIQIKDKLGRPIRDLRISVTDRCNFRCDYCMPKEIFGDDFVFLPKEELLTFDEITTIAKVYAELGVKKLRITGGEPLLRRDLYKLIEKLNHIEGIEDIGMTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDEVFQAINNRNIKASTILQQIDYAISIGFHVKVNVVIQKGINDDQILPMIEYFKDKHIQIRFIEFMDVGNDNGWNFSKVVTKEEMLSTIEEEFDIESLPPKYFGEVATYYRHKDNGAQFGLITSVSASFCSTCTRARLSSDGKFYGCLFSVIDGFDIKSLLRSGATHQKLKDTLISLWQARDDRYSDERTEQTVRNRQRKKINMNYIGG persistent 340 moaA GTP 3',8-cyclase MoaA 4.1.99.22 GO:0006777,GO:0046872,GO:0051539 WP_049434077.1 UPI00066E792D UniRef100_UPI00066E792D,UniRef50_Q49ZI6,UniRef90_A0A3S7GWB2 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 48465 48815 . + . GCA_005502385.1_01961_gene GCA_005502385.1_01961 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNNKVTRFIEAERELSQLKHWLKMTYKISIEEFVVLFKVYEGKKISGKELRDTLHFEMLWDTSKIDVIIRKIYKKELISKLRSETDERQVFYFFNASQQKVLDKMKNEIEAISIAN . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 48465 48815 . + . GCA_005502385.1_01961_mRNA GCA_005502385.1_01961 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNNKVTRFIEAERELSQLKHWLKMTYKISIEEFVVLFKVYEGKKISGKELRDTLHFEMLWDTSKIDVIIRKIYKKELISKLRSETDERQVFYFFNASQQKVLDKMKNEIEAISIAN . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 48465 48815 . + 0 GCA_005502385.1_01961 GCA_005502385.1_01961_gene,GCA_005502385.1_01961_mRNA GCA_005502385.1_01961 HTH-type transcriptional regulator SarV GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNNKVTRFIEAERELSQLKHWLKMTYKISIEEFVVLFKVYEGKKISGKELRDTLHFEMLWDTSKIDVIIRKIYKKELISKLRSETDERQVFYFFNASQQKVLDKMKNEIEAISIAN persistent 116 marR Transcriptional regulator SarV (Staphylococcal accessory regulator V) COG1846,K WP_017174859.1 UPI000313232F UniRef100_A0A4Q9WRI3,UniRef50_Q2FVY9,UniRef90_A0A380FWJ8 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 48890 50095 . - . GCA_005502385.1_01962_gene GCA_005502385.1_01962 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNQTSTTKQPIFTKSFTINFMINFFVYLCMYLLLVIIADYSKTSYHVSDSLSGLVVGLFIIGSLIGRFGTGKYVNRFGPKKILIAGLIFLIITQLLYFISGSITILMLVRLLNGIATAIATTATGTIAAHVTPVERKSEGISLFSLSLVLGSAIGPFFGILLLKSFSINLLFLICLILGIASLIVSVFIKIDFNPTKNAIDRKVAQASGFNIHHFIAKEAVPVAIVMMIIGLNYASILTFLKSFAEQRHLLEASSYFFIFYAIASLITRPIAGRMIDAKNENVVVYPAFLALIITFVLLVFSYNGWVLLLAGVFLGIGYGNLSSSMQAIAIKVSPSSKYGIATSTYFIGLDIGIGFGPSLLGLFTSAITYTQVYFIMAIVAALCTVLYLIVHGRKVNGNTY . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 48890 50095 . - . GCA_005502385.1_01962_mRNA GCA_005502385.1_01962 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNQTSTTKQPIFTKSFTINFMINFFVYLCMYLLLVIIADYSKTSYHVSDSLSGLVVGLFIIGSLIGRFGTGKYVNRFGPKKILIAGLIFLIITQLLYFISGSITILMLVRLLNGIATAIATTATGTIAAHVTPVERKSEGISLFSLSLVLGSAIGPFFGILLLKSFSINLLFLICLILGIASLIVSVFIKIDFNPTKNAIDRKVAQASGFNIHHFIAKEAVPVAIVMMIIGLNYASILTFLKSFAEQRHLLEASSYFFIFYAIASLITRPIAGRMIDAKNENVVVYPAFLALIITFVLLVFSYNGWVLLLAGVFLGIGYGNLSSSMQAIAIKVSPSSKYGIATSTYFIGLDIGIGFGPSLLGLFTSAITYTQVYFIMAIVAALCTVLYLIVHGRKVNGNTY . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 48890 50095 . - 0 GCA_005502385.1_01962 GCA_005502385.1_01962_gene,GCA_005502385.1_01962_mRNA GCA_005502385.1_01962 putative MFS-type transporter YfcJ GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNQTSTTKQPIFTKSFTINFMINFFVYLCMYLLLVIIADYSKTSYHVSDSLSGLVVGLFIIGSLIGRFGTGKYVNRFGPKKILIAGLIFLIITQLLYFISGSITILMLVRLLNGIATAIATTATGTIAAHVTPVERKSEGISLFSLSLVLGSAIGPFFGILLLKSFSINLLFLICLILGIASLIVSVFIKIDFNPTKNAIDRKVAQASGFNIHHFIAKEAVPVAIVMMIIGLNYASILTFLKSFAEQRHLLEASSYFFIFYAIASLITRPIAGRMIDAKNENVVVYPAFLALIITFVLLVFSYNGWVLLLAGVFLGIGYGNLSSSMQAIAIKVSPSSKYGIATSTYFIGLDIGIGFGPSLLGLFTSAITYTQVYFIMAIVAALCTVLYLIVHGRKVNGNTY persistent 401 MFS transporter WP_070547821.1 UPI0008A1C401 UniRef100_UPI0008A1C401,UniRef50_Q2FVZ0,UniRef90_A0A3S7GWL3 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 50082 50525 . - . GCA_005502385.1_01963_gene GCA_005502385.1_01963 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MPTNEFFNSFIGIYRPYIKRTQPILDQFGLHTGQWLVLKDIATYDQTTLVQISKRRFIEKPTARKIIKVLFEKDLLLVTSGTDKREKLLSLSEKGQQLFENINACITPIQEDLIHQSNISNDDLDHVIAIMKKLHTTLSKGDLHESD . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 50082 50525 . - . GCA_005502385.1_01963_mRNA GCA_005502385.1_01963 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MPTNEFFNSFIGIYRPYIKRTQPILDQFGLHTGQWLVLKDIATYDQTTLVQISKRRFIEKPTARKIIKVLFEKDLLLVTSGTDKREKLLSLSEKGQQLFENINACITPIQEDLIHQSNISNDDLDHVIAIMKKLHTTLSKGDLHESD . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 50082 50525 . - 0 GCA_005502385.1_01963 GCA_005502385.1_01963_gene,GCA_005502385.1_01963_mRNA GCA_005502385.1_01963 putative HTH-type transcriptional regulator GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MPTNEFFNSFIGIYRPYIKRTQPILDQFGLHTGQWLVLKDIATYDQTTLVQISKRRFIEKPTARKIIKVLFEKDLLLVTSGTDKREKLLSLSEKGQQLFENINACITPIQEDLIHQSNISNDDLDHVIAIMKKLHTTLSKGDLHESD persistent 147 marR MarR family transcriptional regulator WP_070517391.1 UPI0008A3C8BF UniRef100_UPI0008A3C8BF,UniRef50_A0A3S7GWZ0,UniRef90_A0A3S7GWZ0 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 50696 51466 . + . GCA_005502385.1_01964_gene GCA_005502385.1_01964 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKLKFDHMIHYVDQLKGFKYPGELLKIHSGGKHHQYGTFNRLTYINENYIELLDVEDVEKLKKEAKTEEGRVAFATKIVQDDFKQGFKTMAFRTEDIEKVKQSLNERHIDTIGPIHMDREDKKGEKIRWKLLYIADPDYMVRPPFFIEWNKNKVDHMQNLDSFFQKQFKIDKIIIDSSKRSKTLTKWQSWFNMDIIEENENYTDLKLEGDTIVYRIQDAAQSGYNTIVFKDNETTTPYSIIIKGAKYRFEPNEGTN . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 50696 51466 . + . GCA_005502385.1_01964_mRNA GCA_005502385.1_01964 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKLKFDHMIHYVDQLKGFKYPGELLKIHSGGKHHQYGTFNRLTYINENYIELLDVEDVEKLKKEAKTEEGRVAFATKIVQDDFKQGFKTMAFRTEDIEKVKQSLNERHIDTIGPIHMDREDKKGEKIRWKLLYIADPDYMVRPPFFIEWNKNKVDHMQNLDSFFQKQFKIDKIIIDSSKRSKTLTKWQSWFNMDIIEENENYTDLKLEGDTIVYRIQDAAQSGYNTIVFKDNETTTPYSIIIKGAKYRFEPNEGTN . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 50696 51466 . + 0 GCA_005502385.1_01964 GCA_005502385.1_01964_gene,GCA_005502385.1_01964_mRNA GCA_005502385.1_01964 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKLKFDHMIHYVDQLKGFKYPGELLKIHSGGKHHQYGTFNRLTYINENYIELLDVEDVEKLKKEAKTEEGRVAFATKIVQDDFKQGFKTMAFRTEDIEKVKQSLNERHIDTIGPIHMDREDKKGEKIRWKLLYIADPDYMVRPPFFIEWNKNKVDHMQNLDSFFQKQFKIDKIIIDSSKRSKTLTKWQSWFNMDIIEENENYTDLKLEGDTIVYRIQDAAQSGYNTIVFKDNETTTPYSIIIKGAKYRFEPNEGTN persistent 256 Sulfurtransferase WP_048762094.1 UPI00065FD83A UniRef100_UPI0030BEE297,UniRef50_Q2FVZ2,UniRef90_A0A3S7GWS9 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 51459 51713 . - . GCA_005502385.1_01965_gene GCA_005502385.1_01965 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MRNIILLIFIVCNAIAIIYTMAHPLTINFFSLRVMFVALSLVLTILFILLKTNRFSLILSLISLVLVFIHIAFITHSTYTYLFN . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 51459 51713 . - . GCA_005502385.1_01965_mRNA GCA_005502385.1_01965 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MRNIILLIFIVCNAIAIIYTMAHPLTINFFSLRVMFVALSLVLTILFILLKTNRFSLILSLISLVLVFIHIAFITHSTYTYLFN . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 51459 51713 . - 0 GCA_005502385.1_01965 GCA_005502385.1_01965_gene,GCA_005502385.1_01965_mRNA GCA_005502385.1_01965 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MRNIILLIFIVCNAIAIIYTMAHPLTINFFSLRVMFVALSLVLTILFILLKTNRFSLILSLISLVLVFIHIAFITHSTYTYLFN persistent 84 hypothetical protein UniRef50_A0A7X9WCD6,UniRef90_A0A974KZV7 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 51881 53143 . + . GCA_005502385.1_01966_gene GCA_005502385.1_01966 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MEKMNITNQEHDEFVKTHPNGDLLQLTKWAETKRLTGWYSKRVAVGENGEIKGVGQLLFKKIPKLPFTLCYVSRGFVADYNNRDVLRALLNETKKIAKEEKAYAIKIDPDVEVEHGTEALKNLRMLGFKHKGFKEGLSKDYIQPRMTMITPIDKTDDEIIQNFERRNRSKVRLALKRGTKVEHSNREGLKTFAKLMQITGERDGFLTRDISYFENIYDSLHEDGDAELFLVKLEPQQVLDETNKDLEAQEAEKAKLEAKSEARPNDKKTANKLNDVKNKISKTTELKEDLERLNQEHPEGVYLSGALLMFAGKKSYYLYGASSNDYRDFLPNHHMQYEMMKYARDHGATTYDFGGTDNNPSKDSEHYGLWAFKRVWGTYLSEKIGEFDYVLNQPLYQLIEQVKPRLTKAKIKLSRKLKRK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 51881 53143 . + . GCA_005502385.1_01966_mRNA GCA_005502385.1_01966 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MEKMNITNQEHDEFVKTHPNGDLLQLTKWAETKRLTGWYSKRVAVGENGEIKGVGQLLFKKIPKLPFTLCYVSRGFVADYNNRDVLRALLNETKKIAKEEKAYAIKIDPDVEVEHGTEALKNLRMLGFKHKGFKEGLSKDYIQPRMTMITPIDKTDDEIIQNFERRNRSKVRLALKRGTKVEHSNREGLKTFAKLMQITGERDGFLTRDISYFENIYDSLHEDGDAELFLVKLEPQQVLDETNKDLEAQEAEKAKLEAKSEARPNDKKTANKLNDVKNKISKTTELKEDLERLNQEHPEGVYLSGALLMFAGKKSYYLYGASSNDYRDFLPNHHMQYEMMKYARDHGATTYDFGGTDNNPSKDSEHYGLWAFKRVWGTYLSEKIGEFDYVLNQPLYQLIEQVKPRLTKAKIKLSRKLKRK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 51881 53143 . + 0 GCA_005502385.1_01966 GCA_005502385.1_01966_gene,GCA_005502385.1_01966_mRNA GCA_005502385.1_01966 Lipid II:glycine glycyltransferase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MEKMNITNQEHDEFVKTHPNGDLLQLTKWAETKRLTGWYSKRVAVGENGEIKGVGQLLFKKIPKLPFTLCYVSRGFVADYNNRDVLRALLNETKKIAKEEKAYAIKIDPDVEVEHGTEALKNLRMLGFKHKGFKEGLSKDYIQPRMTMITPIDKTDDEIIQNFERRNRSKVRLALKRGTKVEHSNREGLKTFAKLMQITGERDGFLTRDISYFENIYDSLHEDGDAELFLVKLEPQQVLDETNKDLEAQEAEKAKLEAKSEARPNDKKTANKLNDVKNKISKTTELKEDLERLNQEHPEGVYLSGALLMFAGKKSYYLYGASSNDYRDFLPNHHMQYEMMKYARDHGATTYDFGGTDNNPSKDSEHYGLWAFKRVWGTYLSEKIGEFDYVLNQPLYQLIEQVKPRLTKAKIKLSRKLKRK persistent 420 Lipid II:glycine glycyltransferase 2.3.2.16 WP_049415605.1 UPI00066DEDDE UniRef100_UPI00066DEDDE,UniRef50_Q2FVZ4,UniRef90_A0A3S7H065 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 53246 56419 . + . GCA_005502385.1_01967_gene GCA_005502385.1_01967 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MIKKMLQFSLGNKFAIFLMVLLVIIGGIYSSAKLKLELLPDVENPIISVQTTMPGATPQTTQDEISSKIDKQVRSLAYVKSVETQSISNASIVKVEYNNGTDMDKAEEVLKKEIDKIDFKDGVSEPELIRNSIDAFPIVAYSFTNKSNDLRTTTKEINEQLIPKLQTVDGVQSAQLNGQTTRQVTLKFKQKELDKVRLSADDVENYIKTATRETPLGLFQFGNNEKSLVVDGQFKSVSALKDLNIPLSIAGQGQSSDSNDNSISSTGQEGSQSSSASQSQTNSSLKGTNGQMPSVPLKDLANITVGDERDSISKTNGKDAVNVQVMKAQDANTVQVARATQKKIDEFVKNNSDIKATKTMDTAKPIEDSLYTMIEKAALGTIVAIIVILLFLRNIKTTAISIVSIPLSILIALIALKLSNVSLNILTLGALTIAIGRVIDDSIVVVENIYRRLSDPSEQLKGNNLVISATREVFKPILSSTIVTIIVFLPLAFVSGSVGEMFRPFALAITFSLLASLLVSITVVPALASTFFKNGINIKGNVNEENKLGGISKGYKRVLGWSLNHKWLVLIISIVILIVSIGIGAAKLGTSYISTGEDKFLALTYTPKPGETEEAVLKHAEKAQKYLQSKDKVKTVQFSVGGPSPADPTGSTNSMAIMVEYDSNTPHFEEEPDKVVTHLSKMKDPGEWKNQDLGTGAGNNSVDVTVKGPSTDAIRSTVTKVENKMKSIKGVADVNSDLSQTYDQYEIKVDQNKATDKGISAAQLALNLNENLPEKTITTVKENGNNIDVKVKQNKQTNWSQNKLENIDLHAPSGETVKLKDIARLNKTTTPSKLVQEDGDYATTISGKITASDVGGTSSKVMREINTIDKPNNVKFNVGGATDDINTAMSQLAFAMLIAIVIVYLVLVITFKGGLAPFTILFSLPFTAIGIVFALLITGETISVPSLIGMLMLIGIVVTNAIVLIDRVISNEQQGMLMKEALIEAGGTRIRPILMTAVATIGALLPLLFGQNSSILISKGMAATVIGGLVSSTLLTLIVVPVIYEILFTLKNKLTRK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 53246 56419 . + . GCA_005502385.1_01967_mRNA GCA_005502385.1_01967 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MIKKMLQFSLGNKFAIFLMVLLVIIGGIYSSAKLKLELLPDVENPIISVQTTMPGATPQTTQDEISSKIDKQVRSLAYVKSVETQSISNASIVKVEYNNGTDMDKAEEVLKKEIDKIDFKDGVSEPELIRNSIDAFPIVAYSFTNKSNDLRTTTKEINEQLIPKLQTVDGVQSAQLNGQTTRQVTLKFKQKELDKVRLSADDVENYIKTATRETPLGLFQFGNNEKSLVVDGQFKSVSALKDLNIPLSIAGQGQSSDSNDNSISSTGQEGSQSSSASQSQTNSSLKGTNGQMPSVPLKDLANITVGDERDSISKTNGKDAVNVQVMKAQDANTVQVARATQKKIDEFVKNNSDIKATKTMDTAKPIEDSLYTMIEKAALGTIVAIIVILLFLRNIKTTAISIVSIPLSILIALIALKLSNVSLNILTLGALTIAIGRVIDDSIVVVENIYRRLSDPSEQLKGNNLVISATREVFKPILSSTIVTIIVFLPLAFVSGSVGEMFRPFALAITFSLLASLLVSITVVPALASTFFKNGINIKGNVNEENKLGGISKGYKRVLGWSLNHKWLVLIISIVILIVSIGIGAAKLGTSYISTGEDKFLALTYTPKPGETEEAVLKHAEKAQKYLQSKDKVKTVQFSVGGPSPADPTGSTNSMAIMVEYDSNTPHFEEEPDKVVTHLSKMKDPGEWKNQDLGTGAGNNSVDVTVKGPSTDAIRSTVTKVENKMKSIKGVADVNSDLSQTYDQYEIKVDQNKATDKGISAAQLALNLNENLPEKTITTVKENGNNIDVKVKQNKQTNWSQNKLENIDLHAPSGETVKLKDIARLNKTTTPSKLVQEDGDYATTISGKITASDVGGTSSKVMREINTIDKPNNVKFNVGGATDDINTAMSQLAFAMLIAIVIVYLVLVITFKGGLAPFTILFSLPFTAIGIVFALLITGETISVPSLIGMLMLIGIVVTNAIVLIDRVISNEQQGMLMKEALIEAGGTRIRPILMTAVATIGALLPLLFGQNSSILISKGMAATVIGGLVSSTLLTLIVVPVIYEILFTLKNKLTRK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 53246 56419 . + 0 GCA_005502385.1_01967 GCA_005502385.1_01967_gene,GCA_005502385.1_01967_mRNA GCA_005502385.1_01967 Swarming motility protein SwrC GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MIKKMLQFSLGNKFAIFLMVLLVIIGGIYSSAKLKLELLPDVENPIISVQTTMPGATPQTTQDEISSKIDKQVRSLAYVKSVETQSISNASIVKVEYNNGTDMDKAEEVLKKEIDKIDFKDGVSEPELIRNSIDAFPIVAYSFTNKSNDLRTTTKEINEQLIPKLQTVDGVQSAQLNGQTTRQVTLKFKQKELDKVRLSADDVENYIKTATRETPLGLFQFGNNEKSLVVDGQFKSVSALKDLNIPLSIAGQGQSSDSNDNSISSTGQEGSQSSSASQSQTNSSLKGTNGQMPSVPLKDLANITVGDERDSISKTNGKDAVNVQVMKAQDANTVQVARATQKKIDEFVKNNSDIKATKTMDTAKPIEDSLYTMIEKAALGTIVAIIVILLFLRNIKTTAISIVSIPLSILIALIALKLSNVSLNILTLGALTIAIGRVIDDSIVVVENIYRRLSDPSEQLKGNNLVISATREVFKPILSSTIVTIIVFLPLAFVSGSVGEMFRPFALAITFSLLASLLVSITVVPALASTFFKNGINIKGNVNEENKLGGISKGYKRVLGWSLNHKWLVLIISIVILIVSIGIGAAKLGTSYISTGEDKFLALTYTPKPGETEEAVLKHAEKAQKYLQSKDKVKTVQFSVGGPSPADPTGSTNSMAIMVEYDSNTPHFEEEPDKVVTHLSKMKDPGEWKNQDLGTGAGNNSVDVTVKGPSTDAIRSTVTKVENKMKSIKGVADVNSDLSQTYDQYEIKVDQNKATDKGISAAQLALNLNENLPEKTITTVKENGNNIDVKVKQNKQTNWSQNKLENIDLHAPSGETVKLKDIARLNKTTTPSKLVQEDGDYATTISGKITASDVGGTSSKVMREINTIDKPNNVKFNVGGATDDINTAMSQLAFAMLIAIVIVYLVLVITFKGGLAPFTILFSLPFTAIGIVFALLITGETISVPSLIGMLMLIGIVVTNAIVLIDRVISNEQQGMLMKEALIEAGGTRIRPILMTAVATIGALLPLLFGQNSSILISKGMAATVIGGLVSSTLLTLIVVPVIYEILFTLKNKLTRK persistent 1057 Efflux RND transporter permease subunit UniRef50_Q2FVZ5,UniRef90_A0A3S7GW63 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 56487 56804 . - . GCA_005502385.1_01968_gene GCA_005502385.1_01968 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKIYLILLPILYLIVSYISIFKMKSMFVHILRLIMGILLLFVVAITTIQFPSENWWVFVVLLLLVGNVEVTAFKALKNDYKGVSILNIISIIIFVIYIILTFTMY . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 56487 56804 . - . GCA_005502385.1_01968_mRNA GCA_005502385.1_01968 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKIYLILLPILYLIVSYISIFKMKSMFVHILRLIMGILLLFVVAITTIQFPSENWWVFVVLLLLVGNVEVTAFKALKNDYKGVSILNIISIIIFVIYIILTFTMY . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 56487 56804 . - 0 GCA_005502385.1_01968 GCA_005502385.1_01968_gene,GCA_005502385.1_01968_mRNA GCA_005502385.1_01968 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKIYLILLPILYLIVSYISIFKMKSMFVHILRLIMGILLLFVVAITTIQFPSENWWVFVVLLLLVGNVEVTAFKALKNDYKGVSILNIISIIIFVIYIILTFTMY persistent 105 mspA membrane stabilizing protein MspA WP_019834800.1 UPI000372F6A9 UniRef100_UPI000372F6A9,UniRef50_Q2FVZ6,UniRef90_A0A974KXY0 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 56877 57044 . - . GCA_005502385.1_01969_gene GCA_005502385.1_01969 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MDLESQLAELKYDYIRLQNDLEKKESLNQQIDPLVKQLEEIEKEISDIRSKLHQK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 56877 57044 . - . GCA_005502385.1_01969_mRNA GCA_005502385.1_01969 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MDLESQLAELKYDYIRLQNDLEKKESLNQQIDPLVKQLEEIEKEISDIRSKLHQK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 56877 57044 . - 0 GCA_005502385.1_01969 GCA_005502385.1_01969_gene,GCA_005502385.1_01969_mRNA GCA_005502385.1_01969 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MDLESQLAELKYDYIRLQNDLEKKESLNQQIDPLVKQLEEIEKEISDIRSKLHQK persistent 55 SE1832 family protein WP_101804312.1 UPI00067227D5 UniRef100_UPI00067227D5,UniRef50_Q2FVZ7,UniRef90_A0A8X8KH26 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 57177 58085 . + . GCA_005502385.1_01970_gene GCA_005502385.1_01970 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTEQFIIIILLIALGYLLKRINFIKSADSQVLSTLVLNVTLPSLVIVNLNSANLDLSFSILPIMMLIYGILAKVIMVALFRKYDNHVKGSVGMMAASLNIGLFAYPLVETIWPENGMIYFGMADIGGAIIMFGVTYFVGSYYSEGSDQFNFKFLGKKLISSVPLVTYIVMFILNMANIHLPKASIDFFTIISKANMPLSMILLGIMLSFRIEKQFLPIAVKYLIVHYGLGCIAGLLVHFFLPTSDDMIKTTLLITWLLPVGVAIIPYSIQFKYKTLPLVGMVTNISIVISIIIIYIYQAIFV . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 57177 58085 . + . GCA_005502385.1_01970_mRNA GCA_005502385.1_01970 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTEQFIIIILLIALGYLLKRINFIKSADSQVLSTLVLNVTLPSLVIVNLNSANLDLSFSILPIMMLIYGILAKVIMVALFRKYDNHVKGSVGMMAASLNIGLFAYPLVETIWPENGMIYFGMADIGGAIIMFGVTYFVGSYYSEGSDQFNFKFLGKKLISSVPLVTYIVMFILNMANIHLPKASIDFFTIISKANMPLSMILLGIMLSFRIEKQFLPIAVKYLIVHYGLGCIAGLLVHFFLPTSDDMIKTTLLITWLLPVGVAIIPYSIQFKYKTLPLVGMVTNISIVISIIIIYIYQAIFV . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 57177 58085 . + 0 GCA_005502385.1_01970 GCA_005502385.1_01970_gene,GCA_005502385.1_01970_mRNA GCA_005502385.1_01970 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTEQFIIIILLIALGYLLKRINFIKSADSQVLSTLVLNVTLPSLVIVNLNSANLDLSFSILPIMMLIYGILAKVIMVALFRKYDNHVKGSVGMMAASLNIGLFAYPLVETIWPENGMIYFGMADIGGAIIMFGVTYFVGSYYSEGSDQFNFKFLGKKLISSVPLVTYIVMFILNMANIHLPKASIDFFTIISKANMPLSMILLGIMLSFRIEKQFLPIAVKYLIVHYGLGCIAGLLVHFFLPTSDDMIKTTLLITWLLPVGVAIIPYSIQFKYKTLPLVGMVTNISIVISIIIIYIYQAIFV persistent 302 AEC family transporter WP_048762087.1 UPI000660DA8C UniRef100_UPI000660DA8C,UniRef50_Q2FVZ8,UniRef90_A0A8X8KEV4 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 58154 58945 . - . GCA_005502385.1_01971_gene GCA_005502385.1_01971 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MFSELENKVVVITGSGSGIGKAMAEVFGKEKAKVVLNYRSESHMKELDALQETIKKSGGDSITVQADVSVEEDVKRLVETAVKEFGTIDIMINNAGFEKATPSHEMSMAEWQKVLDINLTGAFIGSREAVKQFLKEDKKGIIINTSSVHDTIPWPNYVNYAASKGGLKLMMETMSMEYAQHGIRINNISPGAVVTEHTKEKFSDPKTRAETLEMIPAREIGDAKDVANGALFLASNLASYVHGTTLYVDGGMMNYPAFMGGKG . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 58154 58945 . - . GCA_005502385.1_01971_mRNA GCA_005502385.1_01971 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MFSELENKVVVITGSGSGIGKAMAEVFGKEKAKVVLNYRSESHMKELDALQETIKKSGGDSITVQADVSVEEDVKRLVETAVKEFGTIDIMINNAGFEKATPSHEMSMAEWQKVLDINLTGAFIGSREAVKQFLKEDKKGIIINTSSVHDTIPWPNYVNYAASKGGLKLMMETMSMEYAQHGIRINNISPGAVVTEHTKEKFSDPKTRAETLEMIPAREIGDAKDVANGALFLASNLASYVHGTTLYVDGGMMNYPAFMGGKG . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 58154 58945 . - 0 GCA_005502385.1_01971 GCA_005502385.1_01971_gene,GCA_005502385.1_01971_mRNA GCA_005502385.1_01971 Glucose 1-dehydrogenase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MFSELENKVVVITGSGSGIGKAMAEVFGKEKAKVVLNYRSESHMKELDALQETIKKSGGDSITVQADVSVEEDVKRLVETAVKEFGTIDIMINNAGFEKATPSHEMSMAEWQKVLDINLTGAFIGSREAVKQFLKEDKKGIIINTSSVHDTIPWPNYVNYAASKGGLKLMMETMSMEYAQHGIRINNISPGAVVTEHTKEKFSDPKTRAETLEMIPAREIGDAKDVANGALFLASNLASYVHGTTLYVDGGMMNYPAFMGGKG persistent 263 fabG 3-oxoacyl-[acyl-carrier-protein] reductase FabG WP_019834801.1 UPI00036B39DA UniRef100_UPI00036B39DA,UniRef50_P40288,UniRef90_A0A3S7GWC0 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 58967 59830 . - . GCA_005502385.1_01972_gene GCA_005502385.1_01972 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MQIINILIALLPALFWGSLVLINVFVGGGPYNQIRGTTLGTLVIGLILLLTGHAQFDNPTVIIVGLISGAMWAFGQGTQLQSVNLVGVSKTMPISTGLQLVGTTLFSAIFLGEWSTGLQVTLGLIAMVLLVTGIALTSLKGKNERSTKDPNFSKAMVILVVGTLGYVGYVVIGNIFGVNGTDALFFQSVGMAIGGFLLSMRHETNIKSTTLNIIPGIVWGIGNLFMFYSQPKVGVATSFSLSQLLVIVSTLGGIFLLGEKKDRRQMIGIWSGIALIIIAAIILGNLK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 58967 59830 . - . GCA_005502385.1_01972_mRNA GCA_005502385.1_01972 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MQIINILIALLPALFWGSLVLINVFVGGGPYNQIRGTTLGTLVIGLILLLTGHAQFDNPTVIIVGLISGAMWAFGQGTQLQSVNLVGVSKTMPISTGLQLVGTTLFSAIFLGEWSTGLQVTLGLIAMVLLVTGIALTSLKGKNERSTKDPNFSKAMVILVVGTLGYVGYVVIGNIFGVNGTDALFFQSVGMAIGGFLLSMRHETNIKSTTLNIIPGIVWGIGNLFMFYSQPKVGVATSFSLSQLLVIVSTLGGIFLLGEKKDRRQMIGIWSGIALIIIAAIILGNLK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 58967 59830 . - 0 GCA_005502385.1_01972 GCA_005502385.1_01972_gene,GCA_005502385.1_01972_mRNA GCA_005502385.1_01972 putative glucose uptake protein GlcU GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MQIINILIALLPALFWGSLVLINVFVGGGPYNQIRGTTLGTLVIGLILLLTGHAQFDNPTVIIVGLISGAMWAFGQGTQLQSVNLVGVSKTMPISTGLQLVGTTLFSAIFLGEWSTGLQVTLGLIAMVLLVTGIALTSLKGKNERSTKDPNFSKAMVILVVGTLGYVGYVVIGNIFGVNGTDALFFQSVGMAIGGFLLSMRHETNIKSTTLNIIPGIVWGIGNLFMFYSQPKVGVATSFSLSQLLVIVSTLGGIFLLGEKKDRRQMIGIWSGIALIIIAAIILGNLK persistent 287 Glucose transporter WP_017174849.1 UPI0002D5317B UniRef100_A0A1L8Y7W1,UniRef50_O07881,UniRef90_A0A974KZX2 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 60117 62255 . + . GCA_005502385.1_01973_gene GCA_005502385.1_01973 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKSLILAEKPSVARDIAEALNIKEKHNGYIANHRYIVTWALGHLVTNAQPEHYDKTYKEWKLEDLPILPKQMHTVVIGKTSKQFKIVKSLILNKDVKDIIIATDAGREGELVARLILDKVKNKKPIKRLWISSVTKKAIQQGFKHLKDGREYNHLYQAALARSEADWIVGINATRALTTKYDAQLSLGRVQTPTIQLVYHRQQEINHFKPQKYYTLSLNVNDAIFDIQTNQRFTNKEEIQKLSKKIEGQSGQIEDVSIKQKKSYAKPLYNLTDLQQASYQRFKMGPKETLNTLQSLYERHKLLTYPRTDSNYLSNDMTDTIQERLQALLATDYKSHARQLLTKSFTTKMHIFNNQKVSDHHAIIPTEIRPNFDTLTNRETKLYLMVAQRFLETLMDPYQYEATQVILKVGEYQFKHAKNVTRKLGFKALSNNDSTANKTITFSKDETYHVQQVKVSEHETTPPEYFNEGSLLKAMENPQNYIQLNDKKYANTLHKTGGIGTVATRADIIEKLFNINAIESKDGKLKVTSKGKQILKLSPEALTSPLMTAEWEEKLLSIEKGKYNAKQFINEMKDFTKEIVGEIKHSDQKYKHDNLTSTECPNCGKFMIKVKTKNGQMLVCQDPSCHTKKNIQRKTNARCPNCKKKMTLFGRGKEAVYRCVCGHTETQAQMDQRLKNKNNGKVSKKDMKKYMNNHDELDNNPFKDALKNLKFN . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 60117 62255 . + . GCA_005502385.1_01973_mRNA GCA_005502385.1_01973 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKSLILAEKPSVARDIAEALNIKEKHNGYIANHRYIVTWALGHLVTNAQPEHYDKTYKEWKLEDLPILPKQMHTVVIGKTSKQFKIVKSLILNKDVKDIIIATDAGREGELVARLILDKVKNKKPIKRLWISSVTKKAIQQGFKHLKDGREYNHLYQAALARSEADWIVGINATRALTTKYDAQLSLGRVQTPTIQLVYHRQQEINHFKPQKYYTLSLNVNDAIFDIQTNQRFTNKEEIQKLSKKIEGQSGQIEDVSIKQKKSYAKPLYNLTDLQQASYQRFKMGPKETLNTLQSLYERHKLLTYPRTDSNYLSNDMTDTIQERLQALLATDYKSHARQLLTKSFTTKMHIFNNQKVSDHHAIIPTEIRPNFDTLTNRETKLYLMVAQRFLETLMDPYQYEATQVILKVGEYQFKHAKNVTRKLGFKALSNNDSTANKTITFSKDETYHVQQVKVSEHETTPPEYFNEGSLLKAMENPQNYIQLNDKKYANTLHKTGGIGTVATRADIIEKLFNINAIESKDGKLKVTSKGKQILKLSPEALTSPLMTAEWEEKLLSIEKGKYNAKQFINEMKDFTKEIVGEIKHSDQKYKHDNLTSTECPNCGKFMIKVKTKNGQMLVCQDPSCHTKKNIQRKTNARCPNCKKKMTLFGRGKEAVYRCVCGHTETQAQMDQRLKNKNNGKVSKKDMKKYMNNHDELDNNPFKDALKNLKFN . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 60117 62255 . + 0 GCA_005502385.1_01973 GCA_005502385.1_01973_gene,GCA_005502385.1_01973_mRNA GCA_005502385.1_01973 DNA topoisomerase 3 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKSLILAEKPSVARDIAEALNIKEKHNGYIANHRYIVTWALGHLVTNAQPEHYDKTYKEWKLEDLPILPKQMHTVVIGKTSKQFKIVKSLILNKDVKDIIIATDAGREGELVARLILDKVKNKKPIKRLWISSVTKKAIQQGFKHLKDGREYNHLYQAALARSEADWIVGINATRALTTKYDAQLSLGRVQTPTIQLVYHRQQEINHFKPQKYYTLSLNVNDAIFDIQTNQRFTNKEEIQKLSKKIEGQSGQIEDVSIKQKKSYAKPLYNLTDLQQASYQRFKMGPKETLNTLQSLYERHKLLTYPRTDSNYLSNDMTDTIQERLQALLATDYKSHARQLLTKSFTTKMHIFNNQKVSDHHAIIPTEIRPNFDTLTNRETKLYLMVAQRFLETLMDPYQYEATQVILKVGEYQFKHAKNVTRKLGFKALSNNDSTANKTITFSKDETYHVQQVKVSEHETTPPEYFNEGSLLKAMENPQNYIQLNDKKYANTLHKTGGIGTVATRADIIEKLFNINAIESKDGKLKVTSKGKQILKLSPEALTSPLMTAEWEEKLLSIEKGKYNAKQFINEMKDFTKEIVGEIKHSDQKYKHDNLTSTECPNCGKFMIKVKTKNGQMLVCQDPSCHTKKNIQRKTNARCPNCKKKMTLFGRGKEAVYRCVCGHTETQAQMDQRLKNKNNGKVSKKDMKKYMNNHDELDNNPFKDALKNLKFN persistent 712 DNA topoisomerase 3 5.6.2.1 UniRef50_P0C2W6,UniRef90_A0A974KY01 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 62364 63698 . + . GCA_005502385.1_01974_gene GCA_005502385.1_01974 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKKYFQFDEYGTNYKREIIGGITTFLSMAYILAVNPQVLSLAGVKGISGDMKMDQGAIFVATALAAFVGSLFMGLIARYPIALAPGMGLNAFFAFTVVLTMGIPWQIGLTGVLFSGIFFAILTATGLREIIINAIPYEMKMAVSAGIGLFITFVGLQSAGIIVKNDSTLVTLGHLTKPSVLLAIFGIAITIILYARKVPGSIFIGMIITAIVGMITGQIHTPSGIVGKIPSITPTFGAAFEAFKDPGQLFTIQFLIVILTFFFIDFFDTAGTLVAVATQAGIMKDNKLPRAGRALFADSLATIVGAIFGTTTTTSYIESTSGVAVGARTGFASIITGFCFLLALFFSPLIEVVTSAVTTPALVVVGILMAANFAEINWKKFEVAVPAFITIIMMPLSYSIATGIACGFIFYPITMLITKKHKEVHPIMYVLMVLFILYFVFVHG . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 62364 63698 . + . GCA_005502385.1_01974_mRNA GCA_005502385.1_01974 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKKYFQFDEYGTNYKREIIGGITTFLSMAYILAVNPQVLSLAGVKGISGDMKMDQGAIFVATALAAFVGSLFMGLIARYPIALAPGMGLNAFFAFTVVLTMGIPWQIGLTGVLFSGIFFAILTATGLREIIINAIPYEMKMAVSAGIGLFITFVGLQSAGIIVKNDSTLVTLGHLTKPSVLLAIFGIAITIILYARKVPGSIFIGMIITAIVGMITGQIHTPSGIVGKIPSITPTFGAAFEAFKDPGQLFTIQFLIVILTFFFIDFFDTAGTLVAVATQAGIMKDNKLPRAGRALFADSLATIVGAIFGTTTTTSYIESTSGVAVGARTGFASIITGFCFLLALFFSPLIEVVTSAVTTPALVVVGILMAANFAEINWKKFEVAVPAFITIIMMPLSYSIATGIACGFIFYPITMLITKKHKEVHPIMYVLMVLFILYFVFVHG . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 62364 63698 . + 0 GCA_005502385.1_01974 GCA_005502385.1_01974_gene,GCA_005502385.1_01974_mRNA GCA_005502385.1_01974 Guanine/hypoxanthine permease PbuG GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKKYFQFDEYGTNYKREIIGGITTFLSMAYILAVNPQVLSLAGVKGISGDMKMDQGAIFVATALAAFVGSLFMGLIARYPIALAPGMGLNAFFAFTVVLTMGIPWQIGLTGVLFSGIFFAILTATGLREIIINAIPYEMKMAVSAGIGLFITFVGLQSAGIIVKNDSTLVTLGHLTKPSVLLAIFGIAITIILYARKVPGSIFIGMIITAIVGMITGQIHTPSGIVGKIPSITPTFGAAFEAFKDPGQLFTIQFLIVILTFFFIDFFDTAGTLVAVATQAGIMKDNKLPRAGRALFADSLATIVGAIFGTTTTTSYIESTSGVAVGARTGFASIITGFCFLLALFFSPLIEVVTSAVTTPALVVVGILMAANFAEINWKKFEVAVPAFITIIMMPLSYSIATGIACGFIFYPITMLITKKHKEVHPIMYVLMVLFILYFVFVHG persistent 444 nCS2 NCS2 family permease COG2252,F WP_002448576.1 UPI00019FC2A0 UniRef100_UPI00019FC2A0,UniRef50_O34987,UniRef90_Q2FW04 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 63756 64145 . - . GCA_005502385.1_01975_gene GCA_005502385.1_01975 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKRNVKLTLAIISIFLIASEFFYGIPFLGGSVILGFGWQPLLLNALLYLILGIILLVDSQNTIKPMAMIPFIGLIGSFVAFLPIIGMFTHWVLFFLMVFFIFVVLNAPTYIPNKDSKVIYTQYKDDKNN . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 63756 64145 . - . GCA_005502385.1_01975_mRNA GCA_005502385.1_01975 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKRNVKLTLAIISIFLIASEFFYGIPFLGGSVILGFGWQPLLLNALLYLILGIILLVDSQNTIKPMAMIPFIGLIGSFVAFLPIIGMFTHWVLFFLMVFFIFVVLNAPTYIPNKDSKVIYTQYKDDKNN . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 63756 64145 . - 0 GCA_005502385.1_01975 GCA_005502385.1_01975_gene,GCA_005502385.1_01975_mRNA GCA_005502385.1_01975 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKRNVKLTLAIISIFLIASEFFYGIPFLGGSVILGFGWQPLLLNALLYLILGIILLVDSQNTIKPMAMIPFIGLIGSFVAFLPIIGMFTHWVLFFLMVFFIFVVLNAPTYIPNKDSKVIYTQYKDDKNN persistent 129 Integral membrane protein WP_019835779.1 UPI00036C690F UniRef100_UPI00036C690F,UniRef50_Q2FW05,UniRef90_A0A3S7GWU2 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 64531 64839 . + . GCA_005502385.1_01976_gene GCA_005502385.1_01976 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAKQKIRIRLKAYDHRVIDQSAEKIVETAKRSGADVSGPIPLPTEKSVYTIIRAVHKYKDSREQFEQRTHKRLIDIVNPTPKTVDALMGLNLPSGVDIEIKL . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 64531 64839 . + . GCA_005502385.1_01976_mRNA GCA_005502385.1_01976 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAKQKIRIRLKAYDHRVIDQSAEKIVETAKRSGADVSGPIPLPTEKSVYTIIRAVHKYKDSREQFEQRTHKRLIDIVNPTPKTVDALMGLNLPSGVDIEIKL . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 64531 64839 . + 0 GCA_005502385.1_01976 GCA_005502385.1_01976_gene,GCA_005502385.1_01976_mRNA GCA_005502385.1_01976 30S ribosomal protein S10 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAKQKIRIRLKAYDHRVIDQSAEKIVETAKRSGADVSGPIPLPTEKSVYTIIRAVHKYKDSREQFEQRTHKRLIDIVNPTPKTVDALMGLNLPSGVDIEIKL persistent 102 rpsJ_Y58D 30S ribosomal protein S10 GO:0000049,GO:0003723,GO:0003735,GO:0005840,GO:0006412,GO:1990904 COG0051,J WP_001118667.1 UPI0000048024 UniRef100_Q5HLZ8,UniRef50_P0A7R5,UniRef90_B9E9J0 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 64867 65529 . + . GCA_005502385.1_01977_gene GCA_005502385.1_01977 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTKGILGRKIGMTQVFGENGELIPVTVVEANQNVVLQKKTEEVDGYNAIQVGFADKQAYKKDAKSNKYANKPAEGHAKKAGAAPKRFIREFRNVNVDEYEVGQEVTVDTFEAGDIIDVTGTSKGKGFQGAIKRHGQGRGPMAHGSHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTVTVQNLEVVQVDTDNNVILVKGNVPGPKKGFVEIKSSIKKGNK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 64867 65529 . + . GCA_005502385.1_01977_mRNA GCA_005502385.1_01977 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTKGILGRKIGMTQVFGENGELIPVTVVEANQNVVLQKKTEEVDGYNAIQVGFADKQAYKKDAKSNKYANKPAEGHAKKAGAAPKRFIREFRNVNVDEYEVGQEVTVDTFEAGDIIDVTGTSKGKGFQGAIKRHGQGRGPMAHGSHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTVTVQNLEVVQVDTDNNVILVKGNVPGPKKGFVEIKSSIKKGNK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 64867 65529 . + 0 GCA_005502385.1_01977 GCA_005502385.1_01977_gene,GCA_005502385.1_01977_mRNA GCA_005502385.1_01977 50S ribosomal protein L3 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTKGILGRKIGMTQVFGENGELIPVTVVEANQNVVLQKKTEEVDGYNAIQVGFADKQAYKKDAKSNKYANKPAEGHAKKAGAAPKRFIREFRNVNVDEYEVGQEVTVDTFEAGDIIDVTGTSKGKGFQGAIKRHGQGRGPMAHGSHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTVTVQNLEVVQVDTDNNVILVKGNVPGPKKGFVEIKSSIKKGNK persistent 220 rplC 50S ribosomal protein L3 GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625 COG0087,J WP_002448523.1 UPI00019FC2A2 UniRef100_A0A1J6DXP4,UniRef50_Q2FW06,UniRef90_Q2FW06 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 65557 66180 . + . GCA_005502385.1_01978_gene GCA_005502385.1_01978 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MANYDVLKVDGSKSGSVELSDSVFAIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGRKPWRQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYSYKMPKKMRRLALRSALSFKVQENNFTIVDTFGFDAPKTKEFKNVLTTLEQPKKVLVVTENEDVNVELSARNIPGVQVSTAQGLNVLDITSADSVIITESAAKKVEEVLG . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 65557 66180 . + . GCA_005502385.1_01978_mRNA GCA_005502385.1_01978 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MANYDVLKVDGSKSGSVELSDSVFAIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGRKPWRQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYSYKMPKKMRRLALRSALSFKVQENNFTIVDTFGFDAPKTKEFKNVLTTLEQPKKVLVVTENEDVNVELSARNIPGVQVSTAQGLNVLDITSADSVIITESAAKKVEEVLG . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 65557 66180 . + 0 GCA_005502385.1_01978 GCA_005502385.1_01978_gene,GCA_005502385.1_01978_mRNA GCA_005502385.1_01978 50S ribosomal protein L4 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MANYDVLKVDGSKSGSVELSDSVFAIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGRKPWRQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYSYKMPKKMRRLALRSALSFKVQENNFTIVDTFGFDAPKTKEFKNVLTTLEQPKKVLVVTENEDVNVELSARNIPGVQVSTAQGLNVLDITSADSVIITESAAKKVEEVLG persistent 207 rplD 50S ribosomal protein L4 GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625,GO:1990904 COG0088,J WP_002448327.1 UPI00019FC2A3 UniRef100_A0A1L8Y7U0,UniRef50_P42921,UniRef90_Q5HM00 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 66180 66455 . + . GCA_005502385.1_01979_gene GCA_005502385.1_01979 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MEARDVLKRPVITEKSSEAMAEDKYTFDVDTRANKTQVKIAVEEIFDVKVESVNIINYKPKKKRMGRYQGYTNKRRKAIVKLKEGSIDLFN . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 66180 66455 . + . GCA_005502385.1_01979_mRNA GCA_005502385.1_01979 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MEARDVLKRPVITEKSSEAMAEDKYTFDVDTRANKTQVKIAVEEIFDVKVESVNIINYKPKKKRMGRYQGYTNKRRKAIVKLKEGSIDLFN . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 66180 66455 . + 0 GCA_005502385.1_01979 GCA_005502385.1_01979_gene,GCA_005502385.1_01979_mRNA GCA_005502385.1_01979 50S ribosomal protein L23 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MEARDVLKRPVITEKSSEAMAEDKYTFDVDTRANKTQVKIAVEEIFDVKVESVNIINYKPKKKRMGRYQGYTNKRRKAIVKLKEGSIDLFN persistent 91 rplW 50S ribosomal protein L23 GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904 COG0089,J WP_002448403.1 UPI00019FC2A4 UniRef100_A0A380FWL5,UniRef50_A0QSD3,UniRef90_B9DM17 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 66492 67325 . + . GCA_005502385.1_01980_gene GCA_005502385.1_01980 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MALKKYKPITNGRRNMTTLDFAEITKTTPEKSLLQPLPKKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGITAKVDSIQYDPNRSANIALLVYADGEKRYIIAPKGLQVGQTVESGAEADIKVGNALPLQNIPVGTVIHNIELKPGKGGQIARSAGASSQVLGKEGKYVLIRLRSGEVRMILSTCRATIGQVGNLQHELVNAGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGRAPIGRPSPMSPWGKPTLGKKTRRGKKSSDKLIVRGRKRK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 66492 67325 . + . GCA_005502385.1_01980_mRNA GCA_005502385.1_01980 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MALKKYKPITNGRRNMTTLDFAEITKTTPEKSLLQPLPKKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGITAKVDSIQYDPNRSANIALLVYADGEKRYIIAPKGLQVGQTVESGAEADIKVGNALPLQNIPVGTVIHNIELKPGKGGQIARSAGASSQVLGKEGKYVLIRLRSGEVRMILSTCRATIGQVGNLQHELVNAGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGRAPIGRPSPMSPWGKPTLGKKTRRGKKSSDKLIVRGRKRK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 66492 67325 . + 0 GCA_005502385.1_01980 GCA_005502385.1_01980_gene,GCA_005502385.1_01980_mRNA GCA_005502385.1_01980 50S ribosomal protein L2 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MALKKYKPITNGRRNMTTLDFAEITKTTPEKSLLQPLPKKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGITAKVDSIQYDPNRSANIALLVYADGEKRYIIAPKGLQVGQTVESGAEADIKVGNALPLQNIPVGTVIHNIELKPGKGGQIARSAGASSQVLGKEGKYVLIRLRSGEVRMILSTCRATIGQVGNLQHELVNAGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGRAPIGRPSPMSPWGKPTLGKKTRRGKKSSDKLIVRGRKRK persistent 277 rplB 50S ribosomal protein L2 GO:0002181,GO:0003723,GO:0003735,GO:0006412,GO:0015934,GO:0016740,GO:0019843 COG0090,J WP_002448473.1 UPI00019FC2A5 UniRef100_A0A4Q9WXR6,UniRef50_Q85FI1,UniRef90_Q49ZG5 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 67390 67668 . + . GCA_005502385.1_01981_gene GCA_005502385.1_01981 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MARSIKKGPFVDDHLMKKVEAQDGSEKKQVIKTWSRRSTIFPNFIGHTFAVYDGRKHVPVYVTEDMVGHKLGEFAPTRTFKGHAADDKKTSR . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 67390 67668 . + . GCA_005502385.1_01981_mRNA GCA_005502385.1_01981 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MARSIKKGPFVDDHLMKKVEAQDGSEKKQVIKTWSRRSTIFPNFIGHTFAVYDGRKHVPVYVTEDMVGHKLGEFAPTRTFKGHAADDKKTSR . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 67390 67668 . + 0 GCA_005502385.1_01981 GCA_005502385.1_01981_gene,GCA_005502385.1_01981_mRNA GCA_005502385.1_01981 30S ribosomal protein S19 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MARSIKKGPFVDDHLMKKVEAQDGSEKKQVIKTWSRRSTIFPNFIGHTFAVYDGRKHVPVYVTEDMVGHKLGEFAPTRTFKGHAADDKKTSR persistent 92 rpsS 30S ribosomal protein S19 GO:0000028,GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0019843 COG0185,J WP_002448348.1 UPI00019FC2A6 UniRef100_A0A1L8Y7T8,UniRef50_Q49ZG4,UniRef90_Q49ZG4 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 67699 68052 . + . GCA_005502385.1_01982_gene GCA_005502385.1_01982 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MEAKAVARTIRIAPRKVRLVLDLIRGKNAGEAIAILKLTNKASSPVIEKVLMSALANAEHNYDMNTDELVVKEAYANEGPTLKRFRPRAQGRASAINKRTSHITIVVSDGKEEAKEA . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 67699 68052 . + . GCA_005502385.1_01982_mRNA GCA_005502385.1_01982 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MEAKAVARTIRIAPRKVRLVLDLIRGKNAGEAIAILKLTNKASSPVIEKVLMSALANAEHNYDMNTDELVVKEAYANEGPTLKRFRPRAQGRASAINKRTSHITIVVSDGKEEAKEA . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 67699 68052 . + 0 GCA_005502385.1_01982 GCA_005502385.1_01982_gene,GCA_005502385.1_01982_mRNA GCA_005502385.1_01982 50S ribosomal protein L22 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MEAKAVARTIRIAPRKVRLVLDLIRGKNAGEAIAILKLTNKASSPVIEKVLMSALANAEHNYDMNTDELVVKEAYANEGPTLKRFRPRAQGRASAINKRTSHITIVVSDGKEEAKEA persistent 117 rplV 50S ribosomal protein L22 GO:0003735,GO:0006412,GO:0015934,GO:0019843,GO:0022625 COG0091,J WP_001829734.1 UPI00000E4FC8 UniRef100_Q5HM04,UniRef50_Q2FW11,UniRef90_Q2FW11 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 68076 68729 . + . GCA_005502385.1_01983_gene GCA_005502385.1_01983 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MGQKINPIGLRVGVIRDWEAKWYAEKDFASLLHEDLRIRKFIDNELKEASVSHVDIERAANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNNLTDKKVHINVVEIKKVDMDARLVAENIARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRADIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTSEGGK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 68076 68729 . + . GCA_005502385.1_01983_mRNA GCA_005502385.1_01983 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MGQKINPIGLRVGVIRDWEAKWYAEKDFASLLHEDLRIRKFIDNELKEASVSHVDIERAANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNNLTDKKVHINVVEIKKVDMDARLVAENIARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRADIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTSEGGK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 68076 68729 . + 0 GCA_005502385.1_01983 GCA_005502385.1_01983_gene,GCA_005502385.1_01983_mRNA GCA_005502385.1_01983 30S ribosomal protein S3 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MGQKINPIGLRVGVIRDWEAKWYAEKDFASLLHEDLRIRKFIDNELKEASVSHVDIERAANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNNLTDKKVHINVVEIKKVDMDARLVAENIARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRADIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTSEGGK persistent 217 rpsC 30S ribosomal protein S3 GO:0003729,GO:0003735,GO:0006412,GO:0019843,GO:0022627 COG0092,J WP_017174845.1 UPI0002DBB359 UniRef100_A0A4V2KXB0,UniRef50_P23309,UniRef90_Q2FW12 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 68732 69166 . + . GCA_005502385.1_01984_gene GCA_005502385.1_01984 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLLPKRVKYRRQHRPKTTGRSKGGNFVTFGEYGLQATTTSWITSRQIESARIAMTRYMKRGGKVWIKIFPHTPYTKKPLEVRMGAGKGAVEGWIAVVKPGRILFEIAGVSEDVAREALRLASHKLPVKTKFVKREELGGETNES . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 68732 69166 . + . GCA_005502385.1_01984_mRNA GCA_005502385.1_01984 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLLPKRVKYRRQHRPKTTGRSKGGNFVTFGEYGLQATTTSWITSRQIESARIAMTRYMKRGGKVWIKIFPHTPYTKKPLEVRMGAGKGAVEGWIAVVKPGRILFEIAGVSEDVAREALRLASHKLPVKTKFVKREELGGETNES . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 68732 69166 . + 0 GCA_005502385.1_01984 GCA_005502385.1_01984_gene,GCA_005502385.1_01984_mRNA GCA_005502385.1_01984 50S ribosomal protein L16 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLLPKRVKYRRQHRPKTTGRSKGGNFVTFGEYGLQATTTSWITSRQIESARIAMTRYMKRGGKVWIKIFPHTPYTKKPLEVRMGAGKGAVEGWIAVVKPGRILFEIAGVSEDVAREALRLASHKLPVKTKFVKREELGGETNES persistent 144 rplP 50S ribosomal protein L16 GO:0000049,GO:0003735,GO:0006412,GO:0019843,GO:0022625 COG0197,J WP_002448374.1 UPI00019FC2A8 UniRef100_A0A1L8Y808,UniRef50_Q2FW13,UniRef90_Q2FW13 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 69156 69365 . + . GCA_005502385.1_01985_gene GCA_005502385.1_01985 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKAKEIRDLTTSEIEEQIKSSKEELFNLRFQLATGQLEETARIRTVRKTIARLKTVAREREIEQSKANQ . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 69156 69365 . + . GCA_005502385.1_01985_mRNA GCA_005502385.1_01985 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKAKEIRDLTTSEIEEQIKSSKEELFNLRFQLATGQLEETARIRTVRKTIARLKTVAREREIEQSKANQ . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 69156 69365 . + 0 GCA_005502385.1_01985 GCA_005502385.1_01985_gene,GCA_005502385.1_01985_mRNA GCA_005502385.1_01985 50S ribosomal protein L29 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKAKEIRDLTTSEIEEQIKSSKEELFNLRFQLATGQLEETARIRTVRKTIARLKTVAREREIEQSKANQ persistent 69 rpmC 50S ribosomal protein L29 GO:0003735,GO:0005840,GO:0006412,GO:0022625 COG0255,J WP_000644737.1 UPI0000133E90 UniRef100_Q2FW14,UniRef50_Q2FW14,UniRef90_Q2FW14 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 69392 69655 . + . GCA_005502385.1_01986_gene GCA_005502385.1_01986 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSERNDRKVYVGKVVSDKMDKTITVLVETYKTHKLYGKRVKYSKKYKTHDENNSAKLGDIVRIQETRPLSASKRFRLVEIVEESVII . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 69392 69655 . + . GCA_005502385.1_01986_mRNA GCA_005502385.1_01986 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSERNDRKVYVGKVVSDKMDKTITVLVETYKTHKLYGKRVKYSKKYKTHDENNSAKLGDIVRIQETRPLSASKRFRLVEIVEESVII . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 69392 69655 . + 0 GCA_005502385.1_01986 GCA_005502385.1_01986_gene,GCA_005502385.1_01986_mRNA GCA_005502385.1_01986 30S ribosomal protein S17 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSERNDRKVYVGKVVSDKMDKTITVLVETYKTHKLYGKRVKYSKKYKTHDENNSAKLGDIVRIQETRPLSASKRFRLVEIVEESVII persistent 87 rpsQ 30S ribosomal protein S17 GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022627 COG0186,J WP_002448443.1 UPI00019FC2A9 UniRef100_A0A1J6EA67,UniRef50_P12874,UniRef90_Q2FW15 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 69687 70055 . + . GCA_005502385.1_01987_gene GCA_005502385.1_01987 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MIQQETRLKVADNSGAREVLTIKVLGGSGRKTANIGDIIVCTVKNATPGGVVKKGDVVKAVVVRTKSGVRRNDGSYIKFDENACVIIRDDKGPRGTRIFGPVARELREGNFMKIVSLAPEVL . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 69687 70055 . + . GCA_005502385.1_01987_mRNA GCA_005502385.1_01987 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MIQQETRLKVADNSGAREVLTIKVLGGSGRKTANIGDIIVCTVKNATPGGVVKKGDVVKAVVVRTKSGVRRNDGSYIKFDENACVIIRDDKGPRGTRIFGPVARELREGNFMKIVSLAPEVL . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 69687 70055 . + 0 GCA_005502385.1_01987 GCA_005502385.1_01987_gene,GCA_005502385.1_01987_mRNA GCA_005502385.1_01987 50S ribosomal protein L14 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MIQQETRLKVADNSGAREVLTIKVLGGSGRKTANIGDIIVCTVKNATPGGVVKKGDVVKAVVVRTKSGVRRNDGSYIKFDENACVIIRDDKGPRGTRIFGPVARELREGNFMKIVSLAPEVL persistent 122 rplN 50S ribosomal protein L14 GO:0003735,GO:0006412,GO:0015934,GO:0022625,GO:0070180 COG0093,J WP_002432661.1 UPI0001929037 UniRef100_A0A269WIX3,UniRef50_B2LMN0,UniRef90_Q927L7 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 70091 70408 . + . GCA_005502385.1_01988_gene GCA_005502385.1_01988 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MHIKKGDNVKVIAGKDKGKEGKVIATEPKKDRVVVEGVNVIKKHQKPTQLNPEGGILETEAAIHVSNVQLLDPKTNEPTRVGYKFVDGKKVRIAKKSGEEIKSNN . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 70091 70408 . + . GCA_005502385.1_01988_mRNA GCA_005502385.1_01988 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MHIKKGDNVKVIAGKDKGKEGKVIATEPKKDRVVVEGVNVIKKHQKPTQLNPEGGILETEAAIHVSNVQLLDPKTNEPTRVGYKFVDGKKVRIAKKSGEEIKSNN . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 70091 70408 . + 0 GCA_005502385.1_01988 GCA_005502385.1_01988_gene,GCA_005502385.1_01988_mRNA GCA_005502385.1_01988 50S ribosomal protein L24 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MHIKKGDNVKVIAGKDKGKEGKVIATEPKKDRVVVEGVNVIKKHQKPTQLNPEGGILETEAAIHVSNVQLLDPKTNEPTRVGYKFVDGKKVRIAKKSGEEIKSNN persistent 105 rplX 50S ribosomal protein L24 GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904 COG0198,J WP_002448459.1 UPI00019FC2AA UniRef100_A0A380FZ71,UniRef50_P0CI78,UniRef90_Q49ZF7 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 70434 70973 . + . GCA_005502385.1_01989_gene GCA_005502385.1_01989 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNRLKERYNTEVTQNLVKKFNYSSVMEVPKIEKIVVNMGVGDAVQNSKVLDNAVEELELITGQKPLITKAKKSVATFRLREGMPIGAKVTLRGERMYEFLDKLIAVSLPRVRDFQGVSKTAFDGRGNYTLGIKEQLIFPEIDYDKVSKVRGMDIVIVTTANTDEEARELLTNFGMPFRK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 70434 70973 . + . GCA_005502385.1_01989_mRNA GCA_005502385.1_01989 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNRLKERYNTEVTQNLVKKFNYSSVMEVPKIEKIVVNMGVGDAVQNSKVLDNAVEELELITGQKPLITKAKKSVATFRLREGMPIGAKVTLRGERMYEFLDKLIAVSLPRVRDFQGVSKTAFDGRGNYTLGIKEQLIFPEIDYDKVSKVRGMDIVIVTTANTDEEARELLTNFGMPFRK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 70434 70973 . + 0 GCA_005502385.1_01989 GCA_005502385.1_01989_gene,GCA_005502385.1_01989_mRNA GCA_005502385.1_01989 50S ribosomal protein L5 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNRLKERYNTEVTQNLVKKFNYSSVMEVPKIEKIVVNMGVGDAVQNSKVLDNAVEELELITGQKPLITKAKKSVATFRLREGMPIGAKVTLRGERMYEFLDKLIAVSLPRVRDFQGVSKTAFDGRGNYTLGIKEQLIFPEIDYDKVSKVRGMDIVIVTTANTDEEARELLTNFGMPFRK persistent 179 rplE 50S ribosomal protein L5 GO:0000049,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904 WP_002448593.1 UPI00019FC2AB UniRef100_A0A1L8Y7S8,UniRef50_P73308,UniRef90_B9DM35 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 70996 71181 . + . GCA_005502385.1_01990_gene GCA_005502385.1_01990 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAKTSMVAKQQKKQKYAVREYTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVRKASW . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 70996 71181 . + . GCA_005502385.1_01990_mRNA GCA_005502385.1_01990 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAKTSMVAKQQKKQKYAVREYTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVRKASW . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 70996 71181 . + 0 GCA_005502385.1_01990 GCA_005502385.1_01990_gene,GCA_005502385.1_01990_mRNA GCA_005502385.1_01990 30S ribosomal protein S14 type Z GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAKTSMVAKQQKKQKYAVREYTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVRKASW persistent 61 rpsZ type Z 30S ribosomal protein S14 GO:0003735,GO:0005840,GO:0006412,GO:0008270,GO:0015935,GO:0019843 COG0199,J WP_001140799.1 UPI0000048028 UniRef100_Q2FW19,UniRef50_P12878,UniRef90_Q2FW19 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 71213 71611 . + . GCA_005502385.1_01991_gene GCA_005502385.1_01991 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTMTDPIADMLTRVRNANMVRHEKLELPASNIKKQIAEILKNEGFIKNVEYVEDDKQGVIRLFLKYGQNNERVITGLKRISKPGLRVYAKANEVPKVLNGLGIALVSTSEGVITDKEARKRNVGGEIIAYVW . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 71213 71611 . + . GCA_005502385.1_01991_mRNA GCA_005502385.1_01991 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTMTDPIADMLTRVRNANMVRHEKLELPASNIKKQIAEILKNEGFIKNVEYVEDDKQGVIRLFLKYGQNNERVITGLKRISKPGLRVYAKANEVPKVLNGLGIALVSTSEGVITDKEARKRNVGGEIIAYVW . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 71213 71611 . + 0 GCA_005502385.1_01991 GCA_005502385.1_01991_gene,GCA_005502385.1_01991_mRNA GCA_005502385.1_01991 30S ribosomal protein S8 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTMTDPIADMLTRVRNANMVRHEKLELPASNIKKQIAEILKNEGFIKNVEYVEDDKQGVIRLFLKYGQNNERVITGLKRISKPGLRVYAKANEVPKVLNGLGIALVSTSEGVITDKEARKRNVGGEIIAYVW persistent 132 rpsH 30S ribosomal protein S8 GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0019843,GO:1990904 COG0096,J WP_002448514.1 UPI00019FC2AC UniRef100_A0A380FYC9,UniRef50_P12879,UniRef90_B9DM33 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 71636 72172 . + . GCA_005502385.1_01992_gene GCA_005502385.1_01992 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSRVGKKIIDIPSDVTVTFDGQTATVKGPKGELTRTFDERMTFKQDENTLEVVRPTDSKEDRTVHGTTRALLNNMVQGVSQGFVKTLELVGVGYRAQMQGNDLVLNVGYSHPVEIKAEDGITFAVEKNTTVTVSGVSKEQVGAIASNIRSVRPPEPYKGKGIRYQGEYVRRKEGKTGK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 71636 72172 . + . GCA_005502385.1_01992_mRNA GCA_005502385.1_01992 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSRVGKKIIDIPSDVTVTFDGQTATVKGPKGELTRTFDERMTFKQDENTLEVVRPTDSKEDRTVHGTTRALLNNMVQGVSQGFVKTLELVGVGYRAQMQGNDLVLNVGYSHPVEIKAEDGITFAVEKNTTVTVSGVSKEQVGAIASNIRSVRPPEPYKGKGIRYQGEYVRRKEGKTGK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 71636 72172 . + 0 GCA_005502385.1_01992 GCA_005502385.1_01992_gene,GCA_005502385.1_01992_mRNA GCA_005502385.1_01992 50S ribosomal protein L6 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSRVGKKIIDIPSDVTVTFDGQTATVKGPKGELTRTFDERMTFKQDENTLEVVRPTDSKEDRTVHGTTRALLNNMVQGVSQGFVKTLELVGVGYRAQMQGNDLVLNVGYSHPVEIKAEDGITFAVEKNTTVTVSGVSKEQVGAIASNIRSVRPPEPYKGKGIRYQGEYVRRKEGKTGK persistent 178 rplF 50S ribosomal protein L6 GO:0002181,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625 COG0097,J WP_002448579.1 UPI00019FC2AD UniRef100_A0A1L8Y7U5,UniRef50_B9DM32,UniRef90_Q4L899 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 72204 72566 . + . GCA_005502385.1_01993_gene GCA_005502385.1_01993 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MISKIDKNKVRLKRHARVRTKLSGTAEKPRLNVYRSNKHIYAQIIDDVKGETLVQASSQDKDIASDSTSKVDLSTKVGEVIAKKASDKGIKEIVFDRGGYLYHGRVKALAEAARENGLEF . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 72204 72566 . + . GCA_005502385.1_01993_mRNA GCA_005502385.1_01993 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MISKIDKNKVRLKRHARVRTKLSGTAEKPRLNVYRSNKHIYAQIIDDVKGETLVQASSQDKDIASDSTSKVDLSTKVGEVIAKKASDKGIKEIVFDRGGYLYHGRVKALAEAARENGLEF . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 72204 72566 . + 0 GCA_005502385.1_01993 GCA_005502385.1_01993_gene,GCA_005502385.1_01993_mRNA GCA_005502385.1_01993 50S ribosomal protein L18 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MISKIDKNKVRLKRHARVRTKLSGTAEKPRLNVYRSNKHIYAQIIDDVKGETLVQASSQDKDIASDSTSKVDLSTKVGEVIAKKASDKGIKEIVFDRGGYLYHGRVKALAEAARENGLEF persistent 120 rplR 50S ribosomal protein L18 GO:0003735,GO:0005840,GO:0006412,GO:0008097,GO:0022625 COG0256,J WP_017174843.1 UPI0002E4FEEC UniRef100_A0A4V2KXA8,UniRef50_P46899,UniRef90_Q5HM15 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 72587 73087 . + . GCA_005502385.1_01994_gene GCA_005502385.1_01994 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MARREEETKEFEERVVTINRVAKVVKGGRRFRFTALVVVGDKNGRVGFGTGKAQEVPEAIKKAVEAAKKDLVVVPRVEGTTPHTVTGRYGSGSVFMKPAAPGTGVIAGGPVRAVLELAGITDILSKSLGSNTPINMVRATLNGLQNLKNAEDVAKLRGKSVEELYN . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 72587 73087 . + . GCA_005502385.1_01994_mRNA GCA_005502385.1_01994 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MARREEETKEFEERVVTINRVAKVVKGGRRFRFTALVVVGDKNGRVGFGTGKAQEVPEAIKKAVEAAKKDLVVVPRVEGTTPHTVTGRYGSGSVFMKPAAPGTGVIAGGPVRAVLELAGITDILSKSLGSNTPINMVRATLNGLQNLKNAEDVAKLRGKSVEELYN . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 72587 73087 . + 0 GCA_005502385.1_01994 GCA_005502385.1_01994_gene,GCA_005502385.1_01994_mRNA GCA_005502385.1_01994 30S ribosomal protein S5 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MARREEETKEFEERVVTINRVAKVVKGGRRFRFTALVVVGDKNGRVGFGTGKAQEVPEAIKKAVEAAKKDLVVVPRVEGTTPHTVTGRYGSGSVFMKPAAPGTGVIAGGPVRAVLELAGITDILSKSLGSNTPINMVRATLNGLQNLKNAEDVAKLRGKSVEELYN persistent 166 rpsE 30S ribosomal protein S5 GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0019843 COG0098,J UniRef50_P21467,UniRef90_B9DM30 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 73104 73283 . + . GCA_005502385.1_01995_gene GCA_005502385.1_01995 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAKLQITLTRSVIGRPETQRKTVEALGLKKTNSSVVVEDNPAIRGQINKVKHLLTVEEK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 73104 73283 . + . GCA_005502385.1_01995_mRNA GCA_005502385.1_01995 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAKLQITLTRSVIGRPETQRKTVEALGLKKTNSSVVVEDNPAIRGQINKVKHLLTVEEK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 73104 73283 . + 0 GCA_005502385.1_01995 GCA_005502385.1_01995_gene,GCA_005502385.1_01995_mRNA GCA_005502385.1_01995 50S ribosomal protein L30 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAKLQITLTRSVIGRPETQRKTVEALGLKKTNSSVVVEDNPAIRGQINKVKHLLTVEEK persistent 59 rpmD 50S ribosomal protein L30 GO:0003735,GO:0006412,GO:0015934,GO:0022625 COG1841,J WP_001096576.1 UPI00019FC2B0 UniRef100_A0A380FYQ2,UniRef50_P0A0G2,UniRef90_P0A0G2 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 73303 73743 . + . GCA_005502385.1_01996_gene GCA_005502385.1_01996 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKLHELKSAEGSRRVRNRVGRGAGTGNGKTSGRGQKGQKARSGGSVRPGFEGGQLPLFRRLPKRGFTNINRKEYAIVNLDQLNQFEDGTEVTPALLVETGVVKNEKSGIKVLGNGSLDKKLTVKAHKFSASAVEAIDAKGGAHEVI . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 73303 73743 . + . GCA_005502385.1_01996_mRNA GCA_005502385.1_01996 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKLHELKSAEGSRRVRNRVGRGAGTGNGKTSGRGQKGQKARSGGSVRPGFEGGQLPLFRRLPKRGFTNINRKEYAIVNLDQLNQFEDGTEVTPALLVETGVVKNEKSGIKVLGNGSLDKKLTVKAHKFSASAVEAIDAKGGAHEVI . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 73303 73743 . + 0 GCA_005502385.1_01996 GCA_005502385.1_01996_gene,GCA_005502385.1_01996_mRNA GCA_005502385.1_01996 50S ribosomal protein L15 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKLHELKSAEGSRRVRNRVGRGAGTGNGKTSGRGQKGQKARSGGSVRPGFEGGQLPLFRRLPKRGFTNINRKEYAIVNLDQLNQFEDGTEVTPALLVETGVVKNEKSGIKVLGNGSLDKKLTVKAHKFSASAVEAIDAKGGAHEVI persistent 146 rplO 50S ribosomal protein L15 GO:0003735,GO:0006412,GO:0015934,GO:0019843,GO:0022625 COG0200,J WP_017174842.1 UPI0002D63D0D UniRef100_A0A4Q9WRF4,UniRef50_Q5M2D2,UniRef90_Q4L895 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 73743 75035 . + . GCA_005502385.1_01997_gene GCA_005502385.1_01997 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MFQTFMSFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEPFEQQGSDQGVAALLNTFGGGALKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEVGKRKLSNVTRYFAIILAFIQSIGMAFQFNNYLGGKLIIHQSVMSYLLIAVVLTTGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPSSIIQFVQQAFVGNDDTTLAWLKVIGLIVGLILLTIGAIYVLEAKRKIPIQYAKKQSAQRLGSQATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKADWAQSIAEYANPSNTYGMIVYVILIIAFAYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAVIAILPIIATKFMNLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKEYKGFGGR . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 73743 75035 . + . GCA_005502385.1_01997_mRNA GCA_005502385.1_01997 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MFQTFMSFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEPFEQQGSDQGVAALLNTFGGGALKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEVGKRKLSNVTRYFAIILAFIQSIGMAFQFNNYLGGKLIIHQSVMSYLLIAVVLTTGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPSSIIQFVQQAFVGNDDTTLAWLKVIGLIVGLILLTIGAIYVLEAKRKIPIQYAKKQSAQRLGSQATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKADWAQSIAEYANPSNTYGMIVYVILIIAFAYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAVIAILPIIATKFMNLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKEYKGFGGR . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 73743 75035 . + 0 GCA_005502385.1_01997 GCA_005502385.1_01997_gene,GCA_005502385.1_01997_mRNA GCA_005502385.1_01997 Protein translocase subunit SecY GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MFQTFMSFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEPFEQQGSDQGVAALLNTFGGGALKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEVGKRKLSNVTRYFAIILAFIQSIGMAFQFNNYLGGKLIIHQSVMSYLLIAVVLTTGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPSSIIQFVQQAFVGNDDTTLAWLKVIGLIVGLILLTIGAIYVLEAKRKIPIQYAKKQSAQRLGSQATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKADWAQSIAEYANPSNTYGMIVYVILIIAFAYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAVIAILPIIATKFMNLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKEYKGFGGR persistent 430 secY preprotein translocase subunit SecY GO:0015031,GO:0016020,GO:0043952 COG0201,U WP_017174841.1 UPI0002EE884F UniRef100_A0A3S7H085,UniRef50_O08387,UniRef90_A0A380FXL4 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 75054 75704 . + . GCA_005502385.1_01998_gene GCA_005502385.1_01998 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKDETDLGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICEKCGTTYHLVFNPPKVDGVCDIDGGKLYQRKDDNPETVSNRLSVNVKQSKPILEYYDEKGVLKNIDGAKDIDEVTKDVIDILDQLK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 75054 75704 . + . GCA_005502385.1_01998_mRNA GCA_005502385.1_01998 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKDETDLGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICEKCGTTYHLVFNPPKVDGVCDIDGGKLYQRKDDNPETVSNRLSVNVKQSKPILEYYDEKGVLKNIDGAKDIDEVTKDVIDILDQLK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 75054 75704 . + 0 GCA_005502385.1_01998 GCA_005502385.1_01998_gene,GCA_005502385.1_01998_mRNA GCA_005502385.1_01998 Adenylate kinase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKDETDLGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICEKCGTTYHLVFNPPKVDGVCDIDGGKLYQRKDDNPETVSNRLSVNVKQSKPILEYYDEKGVLKNIDGAKDIDEVTKDVIDILDQLK persistent 216 adk adenylate kinase 2.7.4.3 GO:0004017,GO:0005524,GO:0005737,GO:0006139,GO:0008270,GO:0016776,GO:0019205,GO:0044209 COG0563,F WP_002448556.1 UPI00019FC35F UniRef100_A0A1L8Y7S2,UniRef50_B2A4G2,UniRef90_Q5HM20 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 75904 76122 . + . GCA_005502385.1_01999_gene GCA_005502385.1_01999 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAKQDVIELEGTVLDTLPNAMFKVELENGHEILAHVSGKIRMNYIRILPGDKVTVEMSPYDLSRGRITYRYK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 75904 76122 . + . GCA_005502385.1_01999_mRNA GCA_005502385.1_01999 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAKQDVIELEGTVLDTLPNAMFKVELENGHEILAHVSGKIRMNYIRILPGDKVTVEMSPYDLSRGRITYRYK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 75904 76122 . + 0 GCA_005502385.1_01999 GCA_005502385.1_01999_gene,GCA_005502385.1_01999_mRNA GCA_005502385.1_01999 Translation initiation factor IF-1 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAKQDVIELEGTVLDTLPNAMFKVELENGHEILAHVSGKIRMNYIRILPGDKVTVEMSPYDLSRGRITYRYK persistent 72 infA translation initiation factor IF-1 GO:0003743,GO:0005829,GO:0006413,GO:0019843,GO:0043022 COG0361,J WP_001829792.1 UPI00000E4FBB UniRef100_Q5HM21,UniRef50_P0A3K4,UniRef90_Q2FW28 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 76154 76267 . + . GCA_005502385.1_02000_gene GCA_005502385.1_02000 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKVRPSVKPICEKCKVIKRKGKVMVICDNPKHKQRQG . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 76154 76267 . + . GCA_005502385.1_02000_mRNA GCA_005502385.1_02000 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKVRPSVKPICEKCKVIKRKGKVMVICDNPKHKQRQG . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 76154 76267 . + 0 GCA_005502385.1_02000 GCA_005502385.1_02000_gene,GCA_005502385.1_02000_mRNA GCA_005502385.1_02000 50S ribosomal protein L36 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKVRPSVKPICEKCKVIKRKGKVMVICDNPKHKQRQG persistent 37 rpmJ 50S ribosomal protein L36 GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:1990904 COG0257,J WP_001829709.1 UPI00000E4FBA UniRef100_Q5HM22,UniRef50_P20278,UniRef90_Q5HM22 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 76290 76655 . + . GCA_005502385.1_02001_gene GCA_005502385.1_02001 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MARIAGVDIPREKRVVISLTYVYGIGTSTAKKIVEEANVSADTRVKDLTDDELGRIREVVDGYKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANKKK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 76290 76655 . + . GCA_005502385.1_02001_mRNA GCA_005502385.1_02001 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MARIAGVDIPREKRVVISLTYVYGIGTSTAKKIVEEANVSADTRVKDLTDDELGRIREVVDGYKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANKKK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 76290 76655 . + 0 GCA_005502385.1_02001 GCA_005502385.1_02001_gene,GCA_005502385.1_02001_mRNA GCA_005502385.1_02001 30S ribosomal protein S13 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MARIAGVDIPREKRVVISLTYVYGIGTSTAKKIVEEANVSADTRVKDLTDDELGRIREVVDGYKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANKKK persistent 121 rpsM 30S ribosomal protein S13 GO:0000049,GO:0003723,GO:0003735,GO:0005829,GO:0005840,GO:0006412,GO:0015935,GO:0019843 COG0099,J WP_002448629.1 UPI00019FC360 UniRef100_A0A380FYE4,UniRef50_P20282,UniRef90_Q2FW30 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 76679 77068 . + . GCA_005502385.1_02002_gene GCA_005502385.1_02002 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MARKQVSRKRRVKKNIENGVAHIRSTFNNTIVTITDEFGNALSWSSAGALGFKGSKKSTPFAAQMASETASKSAMEHGLKTVEVTVKGPGPGRESAIRALQSAGLEVTAIRDVTPVPHNGCRPPKRRRV . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 76679 77068 . + . GCA_005502385.1_02002_mRNA GCA_005502385.1_02002 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MARKQVSRKRRVKKNIENGVAHIRSTFNNTIVTITDEFGNALSWSSAGALGFKGSKKSTPFAAQMASETASKSAMEHGLKTVEVTVKGPGPGRESAIRALQSAGLEVTAIRDVTPVPHNGCRPPKRRRV . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 76679 77068 . + 0 GCA_005502385.1_02002 GCA_005502385.1_02002_gene,GCA_005502385.1_02002_mRNA GCA_005502385.1_02002 30S ribosomal protein S11 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MARKQVSRKRRVKKNIENGVAHIRSTFNNTIVTITDEFGNALSWSSAGALGFKGSKKSTPFAAQMASETASKSAMEHGLKTVEVTVKGPGPGRESAIRALQSAGLEVTAIRDVTPVPHNGCRPPKRRRV persistent 129 rpsK 30S ribosomal protein S11 GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904 COG0100,J WP_000101625.1 UPI0000048025 UniRef100_Q2FW31,UniRef50_Q6N4V6,UniRef90_B9E9L6 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 77151 78095 . + . GCA_005502385.1_02003_gene GCA_005502385.1_02003 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MIEIEKPRIETIEISEDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKYIEIEGVLHEFSAIDNVVEDVSTIIMNIKKLALKIYSEEDKTLEIDVRDEGEVTASDITHDSDVEVLNPELKIATVSKGGHLKIRLVANKGRGYALAEQNNTSDLPIGVIPVDSLYSPVERVNYTVENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKIMTEHLNIFVGLTDEAQNAEIMIEKEEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVKYKLEDLGLGLRKED . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 77151 78095 . + . GCA_005502385.1_02003_mRNA GCA_005502385.1_02003 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MIEIEKPRIETIEISEDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKYIEIEGVLHEFSAIDNVVEDVSTIIMNIKKLALKIYSEEDKTLEIDVRDEGEVTASDITHDSDVEVLNPELKIATVSKGGHLKIRLVANKGRGYALAEQNNTSDLPIGVIPVDSLYSPVERVNYTVENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKIMTEHLNIFVGLTDEAQNAEIMIEKEEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVKYKLEDLGLGLRKED . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 77151 78095 . + 0 GCA_005502385.1_02003 GCA_005502385.1_02003_gene,GCA_005502385.1_02003_mRNA GCA_005502385.1_02003 DNA-directed RNA polymerase subunit alpha GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MIEIEKPRIETIEISEDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKYIEIEGVLHEFSAIDNVVEDVSTIIMNIKKLALKIYSEEDKTLEIDVRDEGEVTASDITHDSDVEVLNPELKIATVSKGGHLKIRLVANKGRGYALAEQNNTSDLPIGVIPVDSLYSPVERVNYTVENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKIMTEHLNIFVGLTDEAQNAEIMIEKEEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVKYKLEDLGLGLRKED persistent 314 rpoA DNA-directed RNA polymerase subunit alpha 2.7.7.6 GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0005737,GO:0006351,GO:0046983 COG0202,K WP_002448356.1 UPI00019FC361 UniRef100_A0A380FZ45,UniRef50_Q2FW32,UniRef90_Q2FW32 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 78117 78488 . + . GCA_005502385.1_02004_gene GCA_005502385.1_02004 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MGYRKLGRTSDQRKAMLRDLATSLIVSERIETTEARAKEVRSVVEKLITLGKKGDLASRRNAAKTLRNVEILNEDETTQTALQKLFGEIAERYAERQGGYTRILKVGPRRGDGAESVIIELVD . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 78117 78488 . + . GCA_005502385.1_02004_mRNA GCA_005502385.1_02004 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MGYRKLGRTSDQRKAMLRDLATSLIVSERIETTEARAKEVRSVVEKLITLGKKGDLASRRNAAKTLRNVEILNEDETTQTALQKLFGEIAERYAERQGGYTRILKVGPRRGDGAESVIIELVD . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 78117 78488 . + 0 GCA_005502385.1_02004 GCA_005502385.1_02004_gene,GCA_005502385.1_02004_mRNA GCA_005502385.1_02004 50S ribosomal protein L17 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MGYRKLGRTSDQRKAMLRDLATSLIVSERIETTEARAKEVRSVVEKLITLGKKGDLASRRNAAKTLRNVEILNEDETTQTALQKLFGEIAERYAERQGGYTRILKVGPRRGDGAESVIIELVD persistent 123 rplQ 50S ribosomal protein L17 GO:0003735,GO:0005840,GO:0006412,GO:0022625 COG0203,J WP_002448491.1 UPI00019FC362 UniRef100_A0A1L8Y7Y1,UniRef50_P20277,UniRef90_Q2FW33 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 78790 79602 . + . GCA_005502385.1_02005_gene GCA_005502385.1_02005 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKTDNNNIIELKHVHFQYQKDAAFTLEDVSFNIPKHQWTSIVGHNGSGKSTIAKLIVGIEQATEGEIFYNNHLVTPDYLREVRRHIGIVFQNPENQFVGSIVEYDVAFGLENHAVSHDKMKAIVIQSLDNVDMKEYMEYEPHSLSGGQKQRVAIAGVLALSPDVIILDEATSMLDPQGKQSLLSLIKQVKQEKNLTIISITHDLSEALESDHVVIMNKGKVYKEGKPNFIFLNTQYLVEIGLDLPFAMKMNQKLGFKDEFTTYEGLVDKL . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 78790 79602 . + . GCA_005502385.1_02005_mRNA GCA_005502385.1_02005 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKTDNNNIIELKHVHFQYQKDAAFTLEDVSFNIPKHQWTSIVGHNGSGKSTIAKLIVGIEQATEGEIFYNNHLVTPDYLREVRRHIGIVFQNPENQFVGSIVEYDVAFGLENHAVSHDKMKAIVIQSLDNVDMKEYMEYEPHSLSGGQKQRVAIAGVLALSPDVIILDEATSMLDPQGKQSLLSLIKQVKQEKNLTIISITHDLSEALESDHVVIMNKGKVYKEGKPNFIFLNTQYLVEIGLDLPFAMKMNQKLGFKDEFTTYEGLVDKL . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 78790 79602 . + 0 GCA_005502385.1_02005 GCA_005502385.1_02005_gene,GCA_005502385.1_02005_mRNA GCA_005502385.1_02005 Energy-coupling factor transporter ATP-binding protein EcfA1 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKTDNNNIIELKHVHFQYQKDAAFTLEDVSFNIPKHQWTSIVGHNGSGKSTIAKLIVGIEQATEGEIFYNNHLVTPDYLREVRRHIGIVFQNPENQFVGSIVEYDVAFGLENHAVSHDKMKAIVIQSLDNVDMKEYMEYEPHSLSGGQKQRVAIAGVLALSPDVIILDEATSMLDPQGKQSLLSLIKQVKQEKNLTIISITHDLSEALESDHVVIMNKGKVYKEGKPNFIFLNTQYLVEIGLDLPFAMKMNQKLGFKDEFTTYEGLVDKL persistent 270 energy-coupling factor transporter ATPase GO:0005524,GO:0006810,GO:0009898,GO:0042626 WP_049379213.1 UPI00066A69A2 UniRef100_A0A4Q9WUZ6,UniRef50_Q2YYM4,UniRef90_A0A3S7GWW8 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 79599 80462 . + . GCA_005502385.1_02006_gene GCA_005502385.1_02006 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTIQFNHVSYIYQKGTPYEYQALNDINLKIEQGKYYAIVGQTGSGKSTLIQHFNGLLKPTKGSITFDNKEITHKTKDKHLRELRQQVGLVFQFPESQLFEDSVEREVAFGPKNFKMNVEQVKSYAYQLLLDLGFDHHIMEQSPFEMSGGQMRKIALVSILAMKPNIIILDEPTAGLDPKSRQQVMELIKSIQVNHHKTVILVSHDMNDVARYAEEIIVMRQGKVIEQCSPKSLFRQHEKLKDWHIALPDVVQLQYDVEDKYQTMFNDIALNEDEFVTLYQEWQEHEK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 79599 80462 . + . GCA_005502385.1_02006_mRNA GCA_005502385.1_02006 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTIQFNHVSYIYQKGTPYEYQALNDINLKIEQGKYYAIVGQTGSGKSTLIQHFNGLLKPTKGSITFDNKEITHKTKDKHLRELRQQVGLVFQFPESQLFEDSVEREVAFGPKNFKMNVEQVKSYAYQLLLDLGFDHHIMEQSPFEMSGGQMRKIALVSILAMKPNIIILDEPTAGLDPKSRQQVMELIKSIQVNHHKTVILVSHDMNDVARYAEEIIVMRQGKVIEQCSPKSLFRQHEKLKDWHIALPDVVQLQYDVEDKYQTMFNDIALNEDEFVTLYQEWQEHEK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 79599 80462 . + 0 GCA_005502385.1_02006 GCA_005502385.1_02006_gene,GCA_005502385.1_02006_mRNA GCA_005502385.1_02006 Energy-coupling factor transporter ATP-binding protein EcfA2 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTIQFNHVSYIYQKGTPYEYQALNDINLKIEQGKYYAIVGQTGSGKSTLIQHFNGLLKPTKGSITFDNKEITHKTKDKHLRELRQQVGLVFQFPESQLFEDSVEREVAFGPKNFKMNVEQVKSYAYQLLLDLGFDHHIMEQSPFEMSGGQMRKIALVSILAMKPNIIILDEPTAGLDPKSRQQVMELIKSIQVNHHKTVILVSHDMNDVARYAEEIIVMRQGKVIEQCSPKSLFRQHEKLKDWHIALPDVVQLQYDVEDKYQTMFNDIALNEDEFVTLYQEWQEHEK persistent 287 energy-coupling factor transporter ATPase 3.6.3.- WP_019835776.1 UPI000376C114 UniRef100_A0A974QNQ7,UniRef50_Q2FW35,UniRef90_A0A6N0I209 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 80452 81258 . + . GCA_005502385.1_02007_gene GCA_005502385.1_02007 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKNKLIIGRYLPNNSVIHRLDPRAKLIFVFVFIIFIFFAHSFATFAWVILLILCFMKMAKIQFWFLIKGLTPIFFFLIFTFLMHIFFTHGGTTLLEIGFIKIDSTGVLEGIFISLRLITIVMVATLMTLSTSPIDLTDAFEKLMAPLKLFKIPVHQLSMIMSIALRFIPTLMDELDKIILAQKSRGSEISSGSLMTRIKAFIPLMIPLFISAFQRADELAIAMEVRGYDANVQRTSYRKLSWHKRDTLSLFSLIPIGMILFVLKYMGV . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 80452 81258 . + . GCA_005502385.1_02007_mRNA GCA_005502385.1_02007 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKNKLIIGRYLPNNSVIHRLDPRAKLIFVFVFIIFIFFAHSFATFAWVILLILCFMKMAKIQFWFLIKGLTPIFFFLIFTFLMHIFFTHGGTTLLEIGFIKIDSTGVLEGIFISLRLITIVMVATLMTLSTSPIDLTDAFEKLMAPLKLFKIPVHQLSMIMSIALRFIPTLMDELDKIILAQKSRGSEISSGSLMTRIKAFIPLMIPLFISAFQRADELAIAMEVRGYDANVQRTSYRKLSWHKRDTLSLFSLIPIGMILFVLKYMGV . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 80452 81258 . + 0 GCA_005502385.1_02007 GCA_005502385.1_02007_gene,GCA_005502385.1_02007_mRNA GCA_005502385.1_02007 Energy-coupling factor transporter transmembrane protein EcfT GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKNKLIIGRYLPNNSVIHRLDPRAKLIFVFVFIIFIFFAHSFATFAWVILLILCFMKMAKIQFWFLIKGLTPIFFFLIFTFLMHIFFTHGGTTLLEIGFIKIDSTGVLEGIFISLRLITIVMVATLMTLSTSPIDLTDAFEKLMAPLKLFKIPVHQLSMIMSIALRFIPTLMDELDKIILAQKSRGSEISSGSLMTRIKAFIPLMIPLFISAFQRADELAIAMEVRGYDANVQRTSYRKLSWHKRDTLSLFSLIPIGMILFVLKYMGV persistent 268 ecfT Energy-coupling factor transporter transmembrane protein EcfT UniRef50_D3ERJ1,UniRef90_A0A6N0I1S7 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 81263 82066 . + . GCA_005502385.1_02008_gene GCA_005502385.1_02008 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MRILVNIAYQGHGFLGFQIQQQGRTVQQQFEKILKRMHRRHVRIHPSSRTDRGVHAYEQYFHFDTELNIEPKQWKYAMNSALPEDIYVNSVKQVDDTFHCRYDCVGKRYRYKVYQAEHRNPFESGLKTFIKDDLDLVKMNEAAKHFIGTHDFTGFCSQKTEVESKERTLYQSEVVKTDEGFDYIVTGSGFLYNMVRVLVAFLIEVGKGKRQPNEVPELLKAKNRDNVPFTAPAEGLYLEKIYLDPEALKNDFGEDVKIHYKKSLQND . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 81263 82066 . + . GCA_005502385.1_02008_mRNA GCA_005502385.1_02008 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MRILVNIAYQGHGFLGFQIQQQGRTVQQQFEKILKRMHRRHVRIHPSSRTDRGVHAYEQYFHFDTELNIEPKQWKYAMNSALPEDIYVNSVKQVDDTFHCRYDCVGKRYRYKVYQAEHRNPFESGLKTFIKDDLDLVKMNEAAKHFIGTHDFTGFCSQKTEVESKERTLYQSEVVKTDEGFDYIVTGSGFLYNMVRVLVAFLIEVGKGKRQPNEVPELLKAKNRDNVPFTAPAEGLYLEKIYLDPEALKNDFGEDVKIHYKKSLQND . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 81263 82066 . + 0 GCA_005502385.1_02008 GCA_005502385.1_02008_gene,GCA_005502385.1_02008_mRNA GCA_005502385.1_02008 tRNA pseudouridine synthase A GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MRILVNIAYQGHGFLGFQIQQQGRTVQQQFEKILKRMHRRHVRIHPSSRTDRGVHAYEQYFHFDTELNIEPKQWKYAMNSALPEDIYVNSVKQVDDTFHCRYDCVGKRYRYKVYQAEHRNPFESGLKTFIKDDLDLVKMNEAAKHFIGTHDFTGFCSQKTEVESKERTLYQSEVVKTDEGFDYIVTGSGFLYNMVRVLVAFLIEVGKGKRQPNEVPELLKAKNRDNVPFTAPAEGLYLEKIYLDPEALKNDFGEDVKIHYKKSLQND persistent 267 truA tRNA pseudouridine(38-40) synthase TruA 5.4.99.12 GO:0001522,GO:0003723,GO:0009451,GO:0009982 WP_048762073.1 UPI00066105F6 UniRef100_UPI00066105F6,UniRef50_Q2FW37,UniRef90_A0AAE5MYJ2 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 82109 82177 . + . GCA_005502385.1_02009_gene GCA_005502385.1_02009 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 82109 82177 . + . GCA_005502385.1_02009_mRNA GCA_005502385.1_02009 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 . . . . . . . GCA_005502385.1|SCOV01000007.1 Infernal:001001 misc_RNA 82109 82177 57.1 + . GCA_005502385.1_02009 GCA_005502385.1_02009_gene,GCA_005502385.1_02009_mRNA GCA_005502385.1_02009 L13_leader GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 82317 82754 . + . GCA_005502385.1_02010_gene GCA_005502385.1_02010 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MRQTFMANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIIINAEKIELTGKKEQDKVYYRHSNHPGGIKSVTAGELKRNNPARLLETSIKGMLPSSRLGEKQGKKLFVYSGAEHPHAAQQPENYELRG . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 82317 82754 . + . GCA_005502385.1_02010_mRNA GCA_005502385.1_02010 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MRQTFMANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIIINAEKIELTGKKEQDKVYYRHSNHPGGIKSVTAGELKRNNPARLLETSIKGMLPSSRLGEKQGKKLFVYSGAEHPHAAQQPENYELRG . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 82317 82754 . + 0 GCA_005502385.1_02010 GCA_005502385.1_02010_gene,GCA_005502385.1_02010_mRNA GCA_005502385.1_02010 50S ribosomal protein L13 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MRQTFMANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIIINAEKIELTGKKEQDKVYYRHSNHPGGIKSVTAGELKRNNPARLLETSIKGMLPSSRLGEKQGKKLFVYSGAEHPHAAQQPENYELRG persistent 145 rplM 50S ribosomal protein L13 GO:0003729,GO:0003735,GO:0005840,GO:0006412,GO:0017148,GO:0022625 COG0102,J WP_002448612.1 UPI00019FC367 UniRef100_A0A1L8Y7R2,UniRef50_Q2FW38,UniRef90_Q2FW38 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 82774 83166 . + . GCA_005502385.1_02011_gene GCA_005502385.1_02011 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAQVEYRGTGRRKNSVARVRLVPGEGNITVNDRDVREYLPFESLILDLNQPFDVTETKGNYDVLVNVYGGGFTGQAQAIRHGIARALLEADPEYRGSLKRAGLLTRDPRMKERKKPGLKKARRSPQFSKR . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 82774 83166 . + . GCA_005502385.1_02011_mRNA GCA_005502385.1_02011 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAQVEYRGTGRRKNSVARVRLVPGEGNITVNDRDVREYLPFESLILDLNQPFDVTETKGNYDVLVNVYGGGFTGQAQAIRHGIARALLEADPEYRGSLKRAGLLTRDPRMKERKKPGLKKARRSPQFSKR . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 82774 83166 . + 0 GCA_005502385.1_02011 GCA_005502385.1_02011_gene,GCA_005502385.1_02011_mRNA GCA_005502385.1_02011 30S ribosomal protein S9 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAQVEYRGTGRRKNSVARVRLVPGEGNITVNDRDVREYLPFESLILDLNQPFDVTETKGNYDVLVNVYGGGFTGQAQAIRHGIARALLEADPEYRGSLKRAGLLTRDPRMKERKKPGLKKARRSPQFSKR persistent 130 rpsI 30S ribosomal protein S9 GO:0003723,GO:0003735,GO:0005840,GO:0006412,GO:0022627 COG0103,J WP_002448344.1 UPI00019FC368 UniRef100_A0A8X8GH33,UniRef50_Q2FW39,UniRef90_Q2FW39 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 83328 84062 . - . GCA_005502385.1_02012_gene GCA_005502385.1_02012 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSNKIEKLKEIVDKSNKIVFFTGAGVSVASGIPDFRSMGGLFDEISKEGYSPEYLLSIDHLNDNKESFIDFYHKRLLVADKKPNIVHEWIAELEKEGKSLGVITQNIDGLHEDAGSEHIDEIHGTLNRFYCINCGKEYTKSYVIEHKLRYCENCGDVIRPDIVLYGEMLDQPTVFRALDKIQKADTVIVLGSSLVVQPAAGFISNFTGDNLVIINRDATPYDRQASLVIHNDMTEVVEEVMKNK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 83328 84062 . - . GCA_005502385.1_02012_mRNA GCA_005502385.1_02012 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSNKIEKLKEIVDKSNKIVFFTGAGVSVASGIPDFRSMGGLFDEISKEGYSPEYLLSIDHLNDNKESFIDFYHKRLLVADKKPNIVHEWIAELEKEGKSLGVITQNIDGLHEDAGSEHIDEIHGTLNRFYCINCGKEYTKSYVIEHKLRYCENCGDVIRPDIVLYGEMLDQPTVFRALDKIQKADTVIVLGSSLVVQPAAGFISNFTGDNLVIINRDATPYDRQASLVIHNDMTEVVEEVMKNK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 83328 84062 . - 0 GCA_005502385.1_02012 GCA_005502385.1_02012_gene,GCA_005502385.1_02012_mRNA GCA_005502385.1_02012 NAD-dependent protein deacetylase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSNKIEKLKEIVDKSNKIVFFTGAGVSVASGIPDFRSMGGLFDEISKEGYSPEYLLSIDHLNDNKESFIDFYHKRLLVADKKPNIVHEWIAELEKEGKSLGVITQNIDGLHEDAGSEHIDEIHGTLNRFYCINCGKEYTKSYVIEHKLRYCENCGDVIRPDIVLYGEMLDQPTVFRALDKIQKADTVIVLGSSLVVQPAAGFISNFTGDNLVIINRDATPYDRQASLVIHNDMTEVVEEVMKNK persistent 244 NAD-dependent protein deacylase 2.3.1.286 GO:0034979,GO:0051287,GO:0070403 WP_048682674.1 UPI00065FE855 UniRef100_UPI00065FE855,UniRef50_P66815,UniRef90_A0A2K4DKI3 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 84268 85023 . + . GCA_005502385.1_02013_gene GCA_005502385.1_02013 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNKYDRLEEITKLVNQKGTVRTNEIVEELNVSDMTVRRDLAELEEKGLLTKIHGGARSNSTFQIKEKSHQEKHTENIEEKRAVARKAVNLIEENDTIFLGPGTTIELLAQLIERESLTVITNCFPVFQILFKKRSLNFKVYLLGGEMRELTESFVGEMTNTLLKTKRFSKMFFSCNGIKDADVLTSTIDEAYTQQLALHRSLEKYLLIDTSKIGKEDFTQLCHLEDLTAVVVDKNDEDNVQKLKAYTEVIY . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 84268 85023 . + . GCA_005502385.1_02013_mRNA GCA_005502385.1_02013 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNKYDRLEEITKLVNQKGTVRTNEIVEELNVSDMTVRRDLAELEEKGLLTKIHGGARSNSTFQIKEKSHQEKHTENIEEKRAVARKAVNLIEENDTIFLGPGTTIELLAQLIERESLTVITNCFPVFQILFKKRSLNFKVYLLGGEMRELTESFVGEMTNTLLKTKRFSKMFFSCNGIKDADVLTSTIDEAYTQQLALHRSLEKYLLIDTSKIGKEDFTQLCHLEDLTAVVVDKNDEDNVQKLKAYTEVIY . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 84268 85023 . + 0 GCA_005502385.1_02013 GCA_005502385.1_02013_gene,GCA_005502385.1_02013_mRNA GCA_005502385.1_02013 Lactose phosphotransferase system repressor GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNKYDRLEEITKLVNQKGTVRTNEIVEELNVSDMTVRRDLAELEEKGLLTKIHGGARSNSTFQIKEKSHQEKHTENIEEKRAVARKAVNLIEENDTIFLGPGTTIELLAQLIERESLTVITNCFPVFQILFKKRSLNFKVYLLGGEMRELTESFVGEMTNTLLKTKRFSKMFFSCNGIKDADVLTSTIDEAYTQQLALHRSLEKYLLIDTSKIGKEDFTQLCHLEDLTAVVVDKNDEDNVQKLKAYTEVIY persistent 251 glpR Lactose phosphotransferase system repressor COG1349,KG WP_017174829.1 UPI0002DAFB23 UniRef100_A0A4Q9WRE5,UniRef50_P0A0Q0,UniRef90_A0A657ZSL4 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 85256 85684 . + . GCA_005502385.1_02014_gene GCA_005502385.1_02014 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTIFIGSDVAGQRLKDVVKTFLKENNHDVVDVTEGKELDFVDSTLAVVHEVQKNDDNLGIAVDAYGAGSFIVATKVKGMIAAEVSDERSAYMTRSHNNARMITMGAEIVGDTLAKNIAKEFVNGHYDGGRHQIRVDMLNKMC . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 85256 85684 . + . GCA_005502385.1_02014_mRNA GCA_005502385.1_02014 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTIFIGSDVAGQRLKDVVKTFLKENNHDVVDVTEGKELDFVDSTLAVVHEVQKNDDNLGIAVDAYGAGSFIVATKVKGMIAAEVSDERSAYMTRSHNNARMITMGAEIVGDTLAKNIAKEFVNGHYDGGRHQIRVDMLNKMC . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 85256 85684 . + 0 GCA_005502385.1_02014 GCA_005502385.1_02014_gene,GCA_005502385.1_02014_mRNA GCA_005502385.1_02014 Galactose-6-phosphate isomerase subunit LacA GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTIFIGSDVAGQRLKDVVKTFLKENNHDVVDVTEGKELDFVDSTLAVVHEVQKNDDNLGIAVDAYGAGSFIVATKVKGMIAAEVSDERSAYMTRSHNNARMITMGAEIVGDTLAKNIAKEFVNGHYDGGRHQIRVDMLNKMC persistent 142 lacA galactose-6-phosphate isomerase subunit LacA 5.3.1.26 GO:0004751,GO:0009052,GO:0019316,GO:0019388,GO:0019512,GO:0050044 COG0698,G WP_002448540.1 UPI00019FC36B UniRef100_A0A4V6MZH1,UniRef50_P23494,UniRef90_Q4L874 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 85700 86215 . + . GCA_005502385.1_02015_gene GCA_005502385.1_02015 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKIAIGCDHIVTDTKMEVSQHLKAQGHEVIDVGTYDFTRTHYPIFGKKVGEKVASGEADLGVCICGTGVGISNAANKVPGVRTALVRDMTSALYSKEELNANVVSFGGKVAGELFIFDIVDAFIKAEYKPTEENKKLIAKINHLEAHNDNQANPHFFDEFLEKWDKGEYHD . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 85700 86215 . + . GCA_005502385.1_02015_mRNA GCA_005502385.1_02015 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKIAIGCDHIVTDTKMEVSQHLKAQGHEVIDVGTYDFTRTHYPIFGKKVGEKVASGEADLGVCICGTGVGISNAANKVPGVRTALVRDMTSALYSKEELNANVVSFGGKVAGELFIFDIVDAFIKAEYKPTEENKKLIAKINHLEAHNDNQANPHFFDEFLEKWDKGEYHD . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 85700 86215 . + 0 GCA_005502385.1_02015 GCA_005502385.1_02015_gene,GCA_005502385.1_02015_mRNA GCA_005502385.1_02015 Galactose-6-phosphate isomerase subunit LacB GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKIAIGCDHIVTDTKMEVSQHLKAQGHEVIDVGTYDFTRTHYPIFGKKVGEKVASGEADLGVCICGTGVGISNAANKVPGVRTALVRDMTSALYSKEELNANVVSFGGKVAGELFIFDIVDAFIKAEYKPTEENKKLIAKINHLEAHNDNQANPHFFDEFLEKWDKGEYHD persistent 171 lacB galactose-6-phosphate isomerase subunit LacB 5.3.1.26 GO:0004751,GO:0009052,GO:0016861,GO:0019316,GO:0019388,GO:0019512,GO:0050044 COG0698,G WP_002448324.1 UPI00019FC36C UniRef100_A0A2A1M932,UniRef50_P23495,UniRef90_Q5HM36 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 86228 87160 . + . GCA_005502385.1_02016_gene GCA_005502385.1_02016 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MILTLTLNPSVDISYPLEQFHLDTVNRVKKTSKTAGGKGLNVTRVLSEFGENVLASGFLGGALGQFIEEQLTDAQIEQSFFKIKGETRNCIAILHEGQQTEILEQGPTIDKREAESYKAHLLELFKRANVIAMSGSLPKGLNTNYYADIVKLANEQGLPTILDSSGQSLMDVLLSESKPSVIKPNIDELSQLLHTTVTTDIDSLKEAVTQPIFKGIEWIIVSLGGDGAFAKHHQTFYKVNIPKIEVVNPVGSGDSTVAGIASGLVHQQSDEDLLKKANAFGMLNAMEHQTGHINVDKFKELFKQIEVIEV . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 86228 87160 . + . GCA_005502385.1_02016_mRNA GCA_005502385.1_02016 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MILTLTLNPSVDISYPLEQFHLDTVNRVKKTSKTAGGKGLNVTRVLSEFGENVLASGFLGGALGQFIEEQLTDAQIEQSFFKIKGETRNCIAILHEGQQTEILEQGPTIDKREAESYKAHLLELFKRANVIAMSGSLPKGLNTNYYADIVKLANEQGLPTILDSSGQSLMDVLLSESKPSVIKPNIDELSQLLHTTVTTDIDSLKEAVTQPIFKGIEWIIVSLGGDGAFAKHHQTFYKVNIPKIEVVNPVGSGDSTVAGIASGLVHQQSDEDLLKKANAFGMLNAMEHQTGHINVDKFKELFKQIEVIEV . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 86228 87160 . + 0 GCA_005502385.1_02016 GCA_005502385.1_02016_gene,GCA_005502385.1_02016_mRNA GCA_005502385.1_02016 Tagatose-6-phosphate kinase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MILTLTLNPSVDISYPLEQFHLDTVNRVKKTSKTAGGKGLNVTRVLSEFGENVLASGFLGGALGQFIEEQLTDAQIEQSFFKIKGETRNCIAILHEGQQTEILEQGPTIDKREAESYKAHLLELFKRANVIAMSGSLPKGLNTNYYADIVKLANEQGLPTILDSSGQSLMDVLLSESKPSVIKPNIDELSQLLHTTVTTDIDSLKEAVTQPIFKGIEWIIVSLGGDGAFAKHHQTFYKVNIPKIEVVNPVGSGDSTVAGIASGLVHQQSDEDLLKKANAFGMLNAMEHQTGHINVDKFKELFKQIEVIEV persistent 310 lacC tagatose-6-phosphate kinase 2.7.1.144 GO:0005524,GO:0005829,GO:0008443,GO:0009024,GO:0019512,GO:2001059 COG1105,G WP_137689674.1 UPI0010F85182 UniRef100_UPI0010F85182,UniRef50_A3CPH5,UniRef90_Q4L872 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 87164 88141 . + . GCA_005502385.1_02017_gene GCA_005502385.1_02017 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTKSQQKLASIEQLSNQDGIISALAFDQRGALKRMMAEHQTEPPTVEQIEQLKVLVSEELTQYASSILLDPEYGLPASDARNKECGLLLAYEKTGYDVNAKGRLPDCLVEWSAKRLKEQGANAVKFLLYYDVDDSEEINIQKKAYIERIGSECVAEDIPFFLEVLTYDDNIPDNKSAEFAKVKPRKVNEAMKLFSEERFNVDVLKVEVPVNMNFVEGFTEGEVVYTKEEAAQHFRDQDAATHLPYIYLSAGVSAELFQETLTFAHDAGAHFNGVLCGRATWSGAVKVYIEQGEQAAREWLRTTGYKNIDDLNKVLKTTATSWKAK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 87164 88141 . + . GCA_005502385.1_02017_mRNA GCA_005502385.1_02017 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTKSQQKLASIEQLSNQDGIISALAFDQRGALKRMMAEHQTEPPTVEQIEQLKVLVSEELTQYASSILLDPEYGLPASDARNKECGLLLAYEKTGYDVNAKGRLPDCLVEWSAKRLKEQGANAVKFLLYYDVDDSEEINIQKKAYIERIGSECVAEDIPFFLEVLTYDDNIPDNKSAEFAKVKPRKVNEAMKLFSEERFNVDVLKVEVPVNMNFVEGFTEGEVVYTKEEAAQHFRDQDAATHLPYIYLSAGVSAELFQETLTFAHDAGAHFNGVLCGRATWSGAVKVYIEQGEQAAREWLRTTGYKNIDDLNKVLKTTATSWKAK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 87164 88141 . + 0 GCA_005502385.1_02017 GCA_005502385.1_02017_gene,GCA_005502385.1_02017_mRNA GCA_005502385.1_02017 Tagatose 1%2C6-diphosphate aldolase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTKSQQKLASIEQLSNQDGIISALAFDQRGALKRMMAEHQTEPPTVEQIEQLKVLVSEELTQYASSILLDPEYGLPASDARNKECGLLLAYEKTGYDVNAKGRLPDCLVEWSAKRLKEQGANAVKFLLYYDVDDSEEINIQKKAYIERIGSECVAEDIPFFLEVLTYDDNIPDNKSAEFAKVKPRKVNEAMKLFSEERFNVDVLKVEVPVNMNFVEGFTEGEVVYTKEEAAQHFRDQDAATHLPYIYLSAGVSAELFQETLTFAHDAGAHFNGVLCGRATWSGAVKVYIEQGEQAAREWLRTTGYKNIDDLNKVLKTTATSWKAK persistent 325 lacD tagatose-bisphosphate aldolase 4.1.2.40 GO:0009024,GO:0009025,GO:0019512,GO:0061595,GO:1902777,GO:2001059 COG3684,GP WP_019835810.1 UPI00037DC80D UniRef100_A0A3S7GZV2,UniRef50_P26593,UniRef90_P0A011 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 88161 88475 . + . GCA_005502385.1_02018_gene GCA_005502385.1_02018 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNREEVQLLGFEIVAYAGDARSKLLEALNAANEGDFEKAEQLTEEANECIANAHKAQTNLLAQEAQGDDIAFSITMIHGQDHLMTTLLLKDLMKHLIELYKKGS . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 88161 88475 . + . GCA_005502385.1_02018_mRNA GCA_005502385.1_02018 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNREEVQLLGFEIVAYAGDARSKLLEALNAANEGDFEKAEQLTEEANECIANAHKAQTNLLAQEAQGDDIAFSITMIHGQDHLMTTLLLKDLMKHLIELYKKGS . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 88161 88475 . + 0 GCA_005502385.1_02018 GCA_005502385.1_02018_gene,GCA_005502385.1_02018_mRNA GCA_005502385.1_02018 PTS system lactose-specific EIIA component GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNREEVQLLGFEIVAYAGDARSKLLEALNAANEGDFEKAEQLTEEANECIANAHKAQTNLLAQEAQGDDIAFSITMIHGQDHLMTTLLLKDLMKHLIELYKKGS persistent 104 lacF PTS system lactose-specific EIIA component 2.7.1.207 GO:0005737,GO:0009401,GO:0016740,GO:0046872 COG1447,G WP_017174827.1 UPI0002FF3734 UniRef100_A0A8X8GJM0,UniRef50_P23532,UniRef90_Q5HM39 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 88481 90232 . + . GCA_005502385.1_02019_gene GCA_005502385.1_02019 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNKLIAWIEKGKPFFEKISRNIYLRAIRDGFIAAIPIILFSSIFILITYVPNVFGFTWSKTMEGILMKPYNYTMGIVGLIVAGTTAKSLTDSYNRKLDKTNQINFISTMMAAMSGFLFLAADPIKEGGFLSAFMGTKGLLTAFISAFITVIVYNFFIKRNITIKMPKEVPPNISQVFKDIFPLSAVIIIIYALDLLSRTFIHTNVANAVLKIFEPLFTAADGWIGVTLIFGAFAFFWFVGIHGPSIVEPAIAAITYANLETNLNLIQAGEHADKIITPGTQMFVATMGGTGATLVVPFMFMWLTKSKRNKAIGRASVVPTFFGVNEPILFGAPLVLNPVFFIPFIFAPIVNVWIFKFFVDVLKMNSFSIFLPWTTPGPLGIVMGTGFAFWSFVLAIVLIVVDVMIYYPFLKVYDEQILEEERGNKEVNNELKEKVSANFDTKKADAILATAGANEATTTEPAPSDEEVSAKESSNSINEQTNVLVLCAGGGTSGLLANALNKAAEEYQVPVKAAAGGYGAHMDIMKDYQLIILAPQVASNYEDIKQDTDRLGIKLAKTQGVEYINLTRDGKAALDFVQQQFGK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 88481 90232 . + . GCA_005502385.1_02019_mRNA GCA_005502385.1_02019 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNKLIAWIEKGKPFFEKISRNIYLRAIRDGFIAAIPIILFSSIFILITYVPNVFGFTWSKTMEGILMKPYNYTMGIVGLIVAGTTAKSLTDSYNRKLDKTNQINFISTMMAAMSGFLFLAADPIKEGGFLSAFMGTKGLLTAFISAFITVIVYNFFIKRNITIKMPKEVPPNISQVFKDIFPLSAVIIIIYALDLLSRTFIHTNVANAVLKIFEPLFTAADGWIGVTLIFGAFAFFWFVGIHGPSIVEPAIAAITYANLETNLNLIQAGEHADKIITPGTQMFVATMGGTGATLVVPFMFMWLTKSKRNKAIGRASVVPTFFGVNEPILFGAPLVLNPVFFIPFIFAPIVNVWIFKFFVDVLKMNSFSIFLPWTTPGPLGIVMGTGFAFWSFVLAIVLIVVDVMIYYPFLKVYDEQILEEERGNKEVNNELKEKVSANFDTKKADAILATAGANEATTTEPAPSDEEVSAKESSNSINEQTNVLVLCAGGGTSGLLANALNKAAEEYQVPVKAAAGGYGAHMDIMKDYQLIILAPQVASNYEDIKQDTDRLGIKLAKTQGVEYINLTRDGKAALDFVQQQFGK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 88481 90232 . + 0 GCA_005502385.1_02019 GCA_005502385.1_02019_gene,GCA_005502385.1_02019_mRNA GCA_005502385.1_02019 PTS system lactose-specific EIICB component GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNKLIAWIEKGKPFFEKISRNIYLRAIRDGFIAAIPIILFSSIFILITYVPNVFGFTWSKTMEGILMKPYNYTMGIVGLIVAGTTAKSLTDSYNRKLDKTNQINFISTMMAAMSGFLFLAADPIKEGGFLSAFMGTKGLLTAFISAFITVIVYNFFIKRNITIKMPKEVPPNISQVFKDIFPLSAVIIIIYALDLLSRTFIHTNVANAVLKIFEPLFTAADGWIGVTLIFGAFAFFWFVGIHGPSIVEPAIAAITYANLETNLNLIQAGEHADKIITPGTQMFVATMGGTGATLVVPFMFMWLTKSKRNKAIGRASVVPTFFGVNEPILFGAPLVLNPVFFIPFIFAPIVNVWIFKFFVDVLKMNSFSIFLPWTTPGPLGIVMGTGFAFWSFVLAIVLIVVDVMIYYPFLKVYDEQILEEERGNKEVNNELKEKVSANFDTKKADAILATAGANEATTTEPAPSDEEVSAKESSNSINEQTNVLVLCAGGGTSGLLANALNKAAEEYQVPVKAAAGGYGAHMDIMKDYQLIILAPQVASNYEDIKQDTDRLGIKLAKTQGVEYINLTRDGKAALDFVQQQFGK persistent 583 lacE lactose-specific PTS transporter subunit EIIC 2.7.1.207 GO:0005886,GO:0009401,GO:0015155,GO:0016020,GO:0016301,GO:0019197,GO:0022869,GO:1901264 COG1455,G WP_101804307.1 UPI000C7BD4F8 UniRef100_UPI00066B9692,UniRef50_P11162,UniRef90_Q5HM40 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 90251 91660 . + . GCA_005502385.1_02020_gene GCA_005502385.1_02020 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKKLPEDFIFGGATAAYQAEGATQTDGKGRVAWDTYLEENYWYTAEPASDFYHKYPVDLELSEKFGVNGIRISIAWSRIFPTGYGEVNQKGVEFYHNLFKECHKRHVEPFVTLHHFDTPETLHSDGDFLNRKTIDYFVDYAKFCFEEFTEVNYWTTFNEIGPIGDGQYLVGKFPPGIKYDFAKVFQSHHNMMVAHAKAVKLFKDNGYNREIGVVHALPTKYPYDPSNPEDVRASELEDIIHNKFILDATYLGKYSRETMEGVQHILSVNGGKLDITDEDYATLDAAKDLNDFLGINYYMSDWMRGYEGESEITHNATGDKGGSKYQLKGVGQREFDIDVPRTDWDWMIYPQGLYDQIMRVIKDYPNYHKIYVTENGLGYKDEFDEERKTVDDDARIDYVKKHLEVIADAIRDGANVKGYFLWSLMDVFSWSNGYEKRYGLFYVDFDTQERYPKKSAYWYKALAESKEIK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 90251 91660 . + . GCA_005502385.1_02020_mRNA GCA_005502385.1_02020 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKKLPEDFIFGGATAAYQAEGATQTDGKGRVAWDTYLEENYWYTAEPASDFYHKYPVDLELSEKFGVNGIRISIAWSRIFPTGYGEVNQKGVEFYHNLFKECHKRHVEPFVTLHHFDTPETLHSDGDFLNRKTIDYFVDYAKFCFEEFTEVNYWTTFNEIGPIGDGQYLVGKFPPGIKYDFAKVFQSHHNMMVAHAKAVKLFKDNGYNREIGVVHALPTKYPYDPSNPEDVRASELEDIIHNKFILDATYLGKYSRETMEGVQHILSVNGGKLDITDEDYATLDAAKDLNDFLGINYYMSDWMRGYEGESEITHNATGDKGGSKYQLKGVGQREFDIDVPRTDWDWMIYPQGLYDQIMRVIKDYPNYHKIYVTENGLGYKDEFDEERKTVDDDARIDYVKKHLEVIADAIRDGANVKGYFLWSLMDVFSWSNGYEKRYGLFYVDFDTQERYPKKSAYWYKALAESKEIK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 90251 91660 . + 0 GCA_005502385.1_02020 GCA_005502385.1_02020_gene,GCA_005502385.1_02020_mRNA GCA_005502385.1_02020 6-phospho-beta-galactosidase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKKLPEDFIFGGATAAYQAEGATQTDGKGRVAWDTYLEENYWYTAEPASDFYHKYPVDLELSEKFGVNGIRISIAWSRIFPTGYGEVNQKGVEFYHNLFKECHKRHVEPFVTLHHFDTPETLHSDGDFLNRKTIDYFVDYAKFCFEEFTEVNYWTTFNEIGPIGDGQYLVGKFPPGIKYDFAKVFQSHHNMMVAHAKAVKLFKDNGYNREIGVVHALPTKYPYDPSNPEDVRASELEDIIHNKFILDATYLGKYSRETMEGVQHILSVNGGKLDITDEDYATLDAAKDLNDFLGINYYMSDWMRGYEGESEITHNATGDKGGSKYQLKGVGQREFDIDVPRTDWDWMIYPQGLYDQIMRVIKDYPNYHKIYVTENGLGYKDEFDEERKTVDDDARIDYVKKHLEVIADAIRDGANVKGYFLWSLMDVFSWSNGYEKRYGLFYVDFDTQERYPKKSAYWYKALAESKEIK persistent 469 lacG 6-phospho-beta-galactosidase 3.2.1.85 GO:0005829,GO:0008422,GO:0019512,GO:0033920 COG2723,G UniRef50_C7N8L9,UniRef90_Q4L868 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 91770 91961 . + . GCA_005502385.1_02021_gene GCA_005502385.1_02021 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MGNLSFTYFMKSDGNHPPFPTLNKKEVNMARTYNGVLNLNEKVNEIQVDQNGKPNKMSEDDKK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 91770 91961 . + . GCA_005502385.1_02021_mRNA GCA_005502385.1_02021 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MGNLSFTYFMKSDGNHPPFPTLNKKEVNMARTYNGVLNLNEKVNEIQVDQNGKPNKMSEDDKK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 91770 91961 . + 0 GCA_005502385.1_02021 GCA_005502385.1_02021_gene,GCA_005502385.1_02021_mRNA GCA_005502385.1_02021 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MGNLSFTYFMKSDGNHPPFPTLNKKEVNMARTYNGVLNLNEKVNEIQVDQNGKPNKMSEDDKK shell 63 Alpha/beta hydrolase WP_017175381.1 UPI00035C3A96 UniRef100_A0A3S7H187,UniRef50_A0A3S7H187,UniRef90_A0A3S7H187 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 92240 93241 . - . GCA_005502385.1_02022_gene GCA_005502385.1_02022 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKLSILDYVPLFEGDTPQEALNHSIELAQLSEKLGYARYWVAEHHQVPSVVSSAPEIVMAMLLEHTHSIHIGSGGVMLPHYSAYKVAEQFKIMEVKHPGRIDMGIGRSPSFKNVNEALNEFKTQKPKLSQQVDDLNKYFTNDTIHSHRFKTLEATPYTEHSPEMFILGMSEQSAELAAKKGLPFVIAHMGQSNANLTHVIRHYKSRFTEYHGHSHSPYIILATFVVTAENELMIKQLLDALNLWLIRINYLKQPKVYPSIETAQQRHYSERDREKIEKNKRRMISGLPHEVAQQLIQLQNEFEVDEIMILPNVYGHTHRTKLIELIAQACLDN . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 92240 93241 . - . GCA_005502385.1_02022_mRNA GCA_005502385.1_02022 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKLSILDYVPLFEGDTPQEALNHSIELAQLSEKLGYARYWVAEHHQVPSVVSSAPEIVMAMLLEHTHSIHIGSGGVMLPHYSAYKVAEQFKIMEVKHPGRIDMGIGRSPSFKNVNEALNEFKTQKPKLSQQVDDLNKYFTNDTIHSHRFKTLEATPYTEHSPEMFILGMSEQSAELAAKKGLPFVIAHMGQSNANLTHVIRHYKSRFTEYHGHSHSPYIILATFVVTAENELMIKQLLDALNLWLIRINYLKQPKVYPSIETAQQRHYSERDREKIEKNKRRMISGLPHEVAQQLIQLQNEFEVDEIMILPNVYGHTHRTKLIELIAQACLDN . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 92240 93241 . - 0 GCA_005502385.1_02022 GCA_005502385.1_02022_gene,GCA_005502385.1_02022_mRNA GCA_005502385.1_02022 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKLSILDYVPLFEGDTPQEALNHSIELAQLSEKLGYARYWVAEHHQVPSVVSSAPEIVMAMLLEHTHSIHIGSGGVMLPHYSAYKVAEQFKIMEVKHPGRIDMGIGRSPSFKNVNEALNEFKTQKPKLSQQVDDLNKYFTNDTIHSHRFKTLEATPYTEHSPEMFILGMSEQSAELAAKKGLPFVIAHMGQSNANLTHVIRHYKSRFTEYHGHSHSPYIILATFVVTAENELMIKQLLDALNLWLIRINYLKQPKVYPSIETAQQRHYSERDREKIEKNKRRMISGLPHEVAQQLIQLQNEFEVDEIMILPNVYGHTHRTKLIELIAQACLDN persistent 333 LLM class flavin-dependent oxidoreductase WP_101804304.1 UPI000C796383 UniRef100_UPI000C796383,UniRef50_A0A1S1GUQ2,UniRef90_A0A8X8GKF7 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 93381 94388 . + . GCA_005502385.1_02023_gene GCA_005502385.1_02023 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNNEQVLLAKYPEGIPQDDTFKYENIDIVDPKENEIQIESLYISVDPYMRGRMTQADSYVEPFKIGEPIQSHIVGKIIKSNSEKFNEDDIIVGMLPWKRINTVNEENVSKISNTDVPLYLYLSTLGMTGQTAYHGLLEIGQPKEGDTVVVSAASGAVGAVVGQIAKIKGATVVGIAGGDKKVNYLTEELGFDAGIDYKKDDFAEALAKAVPNGVDVYFENVGGTIADEVMKHLNRHARIPVCGTISNYNNTEQEKGPRVQSTLIKHQALMRGFLVAEFSDDFEHASKELATWIQEGKIKTKVSIEEGFEYLPKAFRNLFTGENFGKQIVKVSENV . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 93381 94388 . + . GCA_005502385.1_02023_mRNA GCA_005502385.1_02023 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNNEQVLLAKYPEGIPQDDTFKYENIDIVDPKENEIQIESLYISVDPYMRGRMTQADSYVEPFKIGEPIQSHIVGKIIKSNSEKFNEDDIIVGMLPWKRINTVNEENVSKISNTDVPLYLYLSTLGMTGQTAYHGLLEIGQPKEGDTVVVSAASGAVGAVVGQIAKIKGATVVGIAGGDKKVNYLTEELGFDAGIDYKKDDFAEALAKAVPNGVDVYFENVGGTIADEVMKHLNRHARIPVCGTISNYNNTEQEKGPRVQSTLIKHQALMRGFLVAEFSDDFEHASKELATWIQEGKIKTKVSIEEGFEYLPKAFRNLFTGENFGKQIVKVSENV . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 93381 94388 . + 0 GCA_005502385.1_02023 GCA_005502385.1_02023_gene,GCA_005502385.1_02023_mRNA GCA_005502385.1_02023 Putative NADP-dependent oxidoreductase YfmJ GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNNEQVLLAKYPEGIPQDDTFKYENIDIVDPKENEIQIESLYISVDPYMRGRMTQADSYVEPFKIGEPIQSHIVGKIIKSNSEKFNEDDIIVGMLPWKRINTVNEENVSKISNTDVPLYLYLSTLGMTGQTAYHGLLEIGQPKEGDTVVVSAASGAVGAVVGQIAKIKGATVVGIAGGDKKVNYLTEELGFDAGIDYKKDDFAEALAKAVPNGVDVYFENVGGTIADEVMKHLNRHARIPVCGTISNYNNTEQEKGPRVQSTLIKHQALMRGFLVAEFSDDFEHASKELATWIQEGKIKTKVSIEEGFEYLPKAFRNLFTGENFGKQIVKVSENV persistent 335 NADP-dependent oxidoreductase WP_048762038.1 UPI000660FE2D UniRef100_A0A8I0WAV4,UniRef50_A0A1H5ZK44,UniRef90_A0A974QNV1 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 94421 95434 . + . GCA_005502385.1_02024_gene GCA_005502385.1_02024 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKAIGFKQPFKLEEGNVFEPFELDMPQPSSRELLVKIQSISVNPVDTKQRLTEVKNSPRILGFDAVGTVQKTGIEVTMFKEGDIVFYSGAPNQHGSNQEYQLIDERLVAKAPKNLSAEQAASLPLTGITASETLFDVFKISENPNQNKGKTLLIINGAGGVGSITTQIAKAYGLKVITTASRQETIDWSKKMGADIVLNHKEDLKSQLEQQHIEAVDFVFCTFDTDMYYETMIDIVKPRGHVATIVAFKGSQDLNLLKTKSVSFTHEFMFTRPIFQTEDMIKHHYYLEDIAKKIENGTYQNTTTKVINGLTAEHLYEAHQILESNSMIGKLVINVEE . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 94421 95434 . + . GCA_005502385.1_02024_mRNA GCA_005502385.1_02024 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKAIGFKQPFKLEEGNVFEPFELDMPQPSSRELLVKIQSISVNPVDTKQRLTEVKNSPRILGFDAVGTVQKTGIEVTMFKEGDIVFYSGAPNQHGSNQEYQLIDERLVAKAPKNLSAEQAASLPLTGITASETLFDVFKISENPNQNKGKTLLIINGAGGVGSITTQIAKAYGLKVITTASRQETIDWSKKMGADIVLNHKEDLKSQLEQQHIEAVDFVFCTFDTDMYYETMIDIVKPRGHVATIVAFKGSQDLNLLKTKSVSFTHEFMFTRPIFQTEDMIKHHYYLEDIAKKIENGTYQNTTTKVINGLTAEHLYEAHQILESNSMIGKLVINVEE . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 94421 95434 . + 0 GCA_005502385.1_02024 GCA_005502385.1_02024_gene,GCA_005502385.1_02024_mRNA GCA_005502385.1_02024 Zinc-type alcohol dehydrogenase-like protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKAIGFKQPFKLEEGNVFEPFELDMPQPSSRELLVKIQSISVNPVDTKQRLTEVKNSPRILGFDAVGTVQKTGIEVTMFKEGDIVFYSGAPNQHGSNQEYQLIDERLVAKAPKNLSAEQAASLPLTGITASETLFDVFKISENPNQNKGKTLLIINGAGGVGSITTQIAKAYGLKVITTASRQETIDWSKKMGADIVLNHKEDLKSQLEQQHIEAVDFVFCTFDTDMYYETMIDIVKPRGHVATIVAFKGSQDLNLLKTKSVSFTHEFMFTRPIFQTEDMIKHHYYLEDIAKKIENGTYQNTTTKVINGLTAEHLYEAHQILESNSMIGKLVINVEE persistent 337 Zinc-type alcohol dehydrogenase-like protein WP_017175378.1 UPI0003083DEA UniRef100_A0A4Q9WRD5,UniRef50_Q5HM44,UniRef90_A0A4Q9WRD5 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 95598 97160 . + . GCA_005502385.1_02025_gene GCA_005502385.1_02025 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MRKKSISIVFWIALAICTLFVVYGAILPKQLEAITQNITSFIAVNFSWYYLLLVLIIFFICVYLLFSRYASITLGVEGEEPEFSLLSWFAMLFSAGMGIGLVFWTTAEPVSHAYKATPIHKIGTQAAINDAFQFAFFHWGIHAWAVYSIVALVFAYFNFHKGYPGLVSATLVPIFGEKRMRGPIGSAIDVLAVIATVTGVAATLGFGALQINEGLHYLFKVPSHFGTQVIIIIIATILFSWSAWSGIDKGIKTLSNINMILAFIVLIGLFLVGPTLYILNTFTNGLGNYIFNFFSMSLRIPMDGGAKFQWVQNWTIFYWAWWVSWAPFVGIFIARVSRGRTIKEFILGVLFAPALVSFFFFAVFGGAAVYLQHSGIANIAKEAAETATFATLEHFPLGFVLSIVTLIVVMIFFVTSADSATYVLGMLSSKGDINPNSFVKVSWGIIMALFAMIMIYTGGTQAIQNLLIIAALPFSVVIILMIWSLFKTLSSDHPRVSKKDVLMKKDNLKYKKTNNIKKRK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 95598 97160 . + . GCA_005502385.1_02025_mRNA GCA_005502385.1_02025 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MRKKSISIVFWIALAICTLFVVYGAILPKQLEAITQNITSFIAVNFSWYYLLLVLIIFFICVYLLFSRYASITLGVEGEEPEFSLLSWFAMLFSAGMGIGLVFWTTAEPVSHAYKATPIHKIGTQAAINDAFQFAFFHWGIHAWAVYSIVALVFAYFNFHKGYPGLVSATLVPIFGEKRMRGPIGSAIDVLAVIATVTGVAATLGFGALQINEGLHYLFKVPSHFGTQVIIIIIATILFSWSAWSGIDKGIKTLSNINMILAFIVLIGLFLVGPTLYILNTFTNGLGNYIFNFFSMSLRIPMDGGAKFQWVQNWTIFYWAWWVSWAPFVGIFIARVSRGRTIKEFILGVLFAPALVSFFFFAVFGGAAVYLQHSGIANIAKEAAETATFATLEHFPLGFVLSIVTLIVVMIFFVTSADSATYVLGMLSSKGDINPNSFVKVSWGIIMALFAMIMIYTGGTQAIQNLLIIAALPFSVVIILMIWSLFKTLSSDHPRVSKKDVLMKKDNLKYKKTNNIKKRK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 95598 97160 . + 0 GCA_005502385.1_02025 GCA_005502385.1_02025_gene,GCA_005502385.1_02025_mRNA GCA_005502385.1_02025 Glycine betaine transporter OpuD GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MRKKSISIVFWIALAICTLFVVYGAILPKQLEAITQNITSFIAVNFSWYYLLLVLIIFFICVYLLFSRYASITLGVEGEEPEFSLLSWFAMLFSAGMGIGLVFWTTAEPVSHAYKATPIHKIGTQAAINDAFQFAFFHWGIHAWAVYSIVALVFAYFNFHKGYPGLVSATLVPIFGEKRMRGPIGSAIDVLAVIATVTGVAATLGFGALQINEGLHYLFKVPSHFGTQVIIIIIATILFSWSAWSGIDKGIKTLSNINMILAFIVLIGLFLVGPTLYILNTFTNGLGNYIFNFFSMSLRIPMDGGAKFQWVQNWTIFYWAWWVSWAPFVGIFIARVSRGRTIKEFILGVLFAPALVSFFFFAVFGGAAVYLQHSGIANIAKEAAETATFATLEHFPLGFVLSIVTLIVVMIFFVTSADSATYVLGMLSSKGDINPNSFVKVSWGIIMALFAMIMIYTGGTQAIQNLLIIAALPFSVVIILMIWSLFKTLSSDHPRVSKKDVLMKKDNLKYKKTNNIKKRK persistent 520 BCCT family transporter WP_017175377.1 UPI0002DBD564 UniRef100_A0A4V2KXA6,UniRef50_A0A9X4QYP5,UniRef90_A0A6N0I1N2 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 97342 97878 . + . GCA_005502385.1_02026_gene GCA_005502385.1_02026 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MHRFKNFILGLLIVAIVGFLLFMYIDDSRIKRYQDYFLQFNWFQPLLIGLSALLVLIGIILVFSIFKPTYRKPGLYKDYNDGHIYVSRKAVEKSAYDTLTKYDEIRQPNVVTKLYNKKNNSYIDIKADFLVPNDVQVKSLTESIRSDIKHNVEHFTEMPVRKLEINVRDQKSAGQRVL . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 97342 97878 . + . GCA_005502385.1_02026_mRNA GCA_005502385.1_02026 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MHRFKNFILGLLIVAIVGFLLFMYIDDSRIKRYQDYFLQFNWFQPLLIGLSALLVLIGIILVFSIFKPTYRKPGLYKDYNDGHIYVSRKAVEKSAYDTLTKYDEIRQPNVVTKLYNKKNNSYIDIKADFLVPNDVQVKSLTESIRSDIKHNVEHFTEMPVRKLEINVRDQKSAGQRVL . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 97342 97878 . + 0 GCA_005502385.1_02026 GCA_005502385.1_02026_gene,GCA_005502385.1_02026_mRNA GCA_005502385.1_02026 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MHRFKNFILGLLIVAIVGFLLFMYIDDSRIKRYQDYFLQFNWFQPLLIGLSALLVLIGIILVFSIFKPTYRKPGLYKDYNDGHIYVSRKAVEKSAYDTLTKYDEIRQPNVVTKLYNKKNNSYIDIKADFLVPNDVQVKSLTESIRSDIKHNVEHFTEMPVRKLEINVRDQKSAGQRVL persistent 178 amaP alkaline shock response membrane anchor protein AmaP WP_002448415.1 UPI00019FC387 UniRef100_A0A1L8Y7V1,UniRef50_Q2FW64,UniRef90_A0AAE5MY78 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 97891 98127 . + . GCA_005502385.1_02027_gene GCA_005502385.1_02027 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MADNNQNSQDSTQQIIDFLKSYKWRIIGFFAFLIIAILFLTLGFWKTILIIVLCLIGIGVGYMKDRTQDFMNFLNRWS . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 97891 98127 . + . GCA_005502385.1_02027_mRNA GCA_005502385.1_02027 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MADNNQNSQDSTQQIIDFLKSYKWRIIGFFAFLIIAILFLTLGFWKTILIIVLCLIGIGVGYMKDRTQDFMNFLNRWS . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 97891 98127 . + 0 GCA_005502385.1_02027 GCA_005502385.1_02027_gene,GCA_005502385.1_02027_mRNA GCA_005502385.1_02027 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MADNNQNSQDSTQQIIDFLKSYKWRIIGFFAFLIIAILFLTLGFWKTILIIVLCLIGIGVGYMKDRTQDFMNFLNRWS persistent 78 DUF2273 domain-containing protein COG5547,S WP_002448488.1 UPI00019FC388 UniRef100_A0A1L8Y7P4,UniRef50_Q2FW65,UniRef90_A0A2A1K8D0 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 98206 98754 . + . GCA_005502385.1_02028_gene GCA_005502385.1_02028 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAVDNNKAKQAYNNQTGVNEKEREERQEQAQQYREERQNNQQHFENKLTFSDEVIEKIAGIAAREVRGILDMKGGFTDSISSAFSSGNNVTQGVSVEVGEKQAAVDLKVILEYGESAPKIFRKVTDLVKEQVKYITGLDVVEVNMQVDDVMTKKEWAQKNQKNNNNNNNNNNNNNFERSDLQ . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 98206 98754 . + . GCA_005502385.1_02028_mRNA GCA_005502385.1_02028 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAVDNNKAKQAYNNQTGVNEKEREERQEQAQQYREERQNNQQHFENKLTFSDEVIEKIAGIAAREVRGILDMKGGFTDSISSAFSSGNNVTQGVSVEVGEKQAAVDLKVILEYGESAPKIFRKVTDLVKEQVKYITGLDVVEVNMQVDDVMTKKEWAQKNQKNNNNNNNNNNNNNFERSDLQ . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 98206 98754 . + 0 GCA_005502385.1_02028 GCA_005502385.1_02028_gene,GCA_005502385.1_02028_mRNA GCA_005502385.1_02028 Alkaline shock protein 23 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MAVDNNKAKQAYNNQTGVNEKEREERQEQAQQYREERQNNQQHFENKLTFSDEVIEKIAGIAAREVRGILDMKGGFTDSISSAFSSGNNVTQGVSVEVGEKQAAVDLKVILEYGESAPKIFRKVTDLVKEQVKYITGLDVVEVNMQVDDVMTKKEWAQKNQKNNNNNNNNNNNNNFERSDLQ persistent 182 Alkaline shock protein 23 WP_002448598.1 UPI00019FC389 UniRef100_A0A1L8Y7P7,UniRef50_Q2FW66,UniRef90_A0A1L8Y7P7 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 98853 100796 . - . GCA_005502385.1_02029_gene GCA_005502385.1_02029 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNKNTTINNHNLQLTNEEYDVYTYLNEFYPDLINHFKQYILIGRDKISQRLITSLYRENLIHAKDNSQIIRPTKLTVSMFSKDKDVLCIHFPKSNIDIYSQIKGRYAFDRVDVEGPFYILKHHNHEYERIQHPNDILDLILAEEPKLDNAASEQFREDLNNSAANMILALSYQAKHMHSNYESLWELIAKSDDSYLRSEQSVIEGHPLHPGAKLRKGMSAKENIHYSSEYGQEIQLKCVFIHNSIANVQSLSSTYNDMLQQSFHKLFTHLLNKYNDIRIEDYHLMVVHPWQFEHILLSQYQQELDEQLIIPIDMTLPYYAGLSFRTLMPKYPKLFPHIKLSTNVHITGEIRTLSEQTTHNGPLVTKIVNDILKNDPDFQPYRIETLDEIAGIHFYNSKDHSTIQTERSEQLGTLFRENIYTLIEEDTIPVIPSSLVAYYPNNTEPPIESLIKRYQHTHQFKTFEKAAYAWIQDYATQLLGLVIPLYVKYGIALEAHLQNSIATFNQDGCLSKIYIRDFEGLRIDETQLNQMGYKTSHFHKKSRILTQSTTSVFNKVFYSTVQNHLAELILTITEKVENINFEKIMWHHISHIIQDILAKLTDVDTERMQKITHTLFAATIDYKCVTTMRLEDEAHHYTYIKVNNPLH . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 98853 100796 . - . GCA_005502385.1_02029_mRNA GCA_005502385.1_02029 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNKNTTINNHNLQLTNEEYDVYTYLNEFYPDLINHFKQYILIGRDKISQRLITSLYRENLIHAKDNSQIIRPTKLTVSMFSKDKDVLCIHFPKSNIDIYSQIKGRYAFDRVDVEGPFYILKHHNHEYERIQHPNDILDLILAEEPKLDNAASEQFREDLNNSAANMILALSYQAKHMHSNYESLWELIAKSDDSYLRSEQSVIEGHPLHPGAKLRKGMSAKENIHYSSEYGQEIQLKCVFIHNSIANVQSLSSTYNDMLQQSFHKLFTHLLNKYNDIRIEDYHLMVVHPWQFEHILLSQYQQELDEQLIIPIDMTLPYYAGLSFRTLMPKYPKLFPHIKLSTNVHITGEIRTLSEQTTHNGPLVTKIVNDILKNDPDFQPYRIETLDEIAGIHFYNSKDHSTIQTERSEQLGTLFRENIYTLIEEDTIPVIPSSLVAYYPNNTEPPIESLIKRYQHTHQFKTFEKAAYAWIQDYATQLLGLVIPLYVKYGIALEAHLQNSIATFNQDGCLSKIYIRDFEGLRIDETQLNQMGYKTSHFHKKSRILTQSTTSVFNKVFYSTVQNHLAELILTITEKVENINFEKIMWHHISHIIQDILAKLTDVDTERMQKITHTLFAATIDYKCVTTMRLEDEAHHYTYIKVNNPLH . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 98853 100796 . - 0 GCA_005502385.1_02029 GCA_005502385.1_02029_gene,GCA_005502385.1_02029_mRNA GCA_005502385.1_02029 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MNKNTTINNHNLQLTNEEYDVYTYLNEFYPDLINHFKQYILIGRDKISQRLITSLYRENLIHAKDNSQIIRPTKLTVSMFSKDKDVLCIHFPKSNIDIYSQIKGRYAFDRVDVEGPFYILKHHNHEYERIQHPNDILDLILAEEPKLDNAASEQFREDLNNSAANMILALSYQAKHMHSNYESLWELIAKSDDSYLRSEQSVIEGHPLHPGAKLRKGMSAKENIHYSSEYGQEIQLKCVFIHNSIANVQSLSSTYNDMLQQSFHKLFTHLLNKYNDIRIEDYHLMVVHPWQFEHILLSQYQQELDEQLIIPIDMTLPYYAGLSFRTLMPKYPKLFPHIKLSTNVHITGEIRTLSEQTTHNGPLVTKIVNDILKNDPDFQPYRIETLDEIAGIHFYNSKDHSTIQTERSEQLGTLFRENIYTLIEEDTIPVIPSSLVAYYPNNTEPPIESLIKRYQHTHQFKTFEKAAYAWIQDYATQLLGLVIPLYVKYGIALEAHLQNSIATFNQDGCLSKIYIRDFEGLRIDETQLNQMGYKTSHFHKKSRILTQSTTSVFNKVFYSTVQNHLAELILTITEKVENINFEKIMWHHISHIIQDILAKLTDVDTERMQKITHTLFAATIDYKCVTTMRLEDEAHHYTYIKVNNPLH persistent 647 Sialic acid synthase 6.3.2.58 WP_101804303.1 UPI000C7D131B UniRef100_UPI000C7D131B,UniRef50_Q2FW70,UniRef90_A0A8X8GQN0 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 101010 102767 . + . GCA_005502385.1_02030_gene GCA_005502385.1_02030 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLNEWKHADRNMQYRVVNALIKENIWTHSTTIFKENHYITIEFEQVLLNVHYKYESALSRYEFDGPIIYMNHQHKESVDSLENLLDILVTDFHIDIPFHLKSELIHSRDSFIEVYKEFDTRHEYLQRHDKYINDSERLNFFTWLEKLKKNNDIDDVLYSESLIFEGHPTHPLTKTKLPLSMEEVRTYSPEFEKIINLKVMLIHNEYVNVTTILDHSQFILNEVIPEYLDELHTFMNDRERLLKDYKVILVHPWQYEHTIRNKFKEWLQNHILISTPFHVPSKATSSFRTMSLINHPYHVKLPVNVQATSAVRTVSPETTIDGPKLSQALHRELNQYTQLDVVLEPYGLFAKTDSDDARQLACIIREKPFIKNDGILLVTGALVNKNVVDNEITVDSYLKWINDDINQHTIHQFMRNYTRQLVTPLLALIQDYGIALEAHMQNTLVHLGPKYQIQFIVRDLGGSRIDIKTLSQRLKHIEVENKSLLADSIEEVIMKFQHAVVQNQLAELIFHFKKYEFIKEEELFNIIQEEIEVAINDTKPHADTLRKVLFGPTITVKALLKMRMKKKVKKYLNISLDNPIKREVN . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 101010 102767 . + . GCA_005502385.1_02030_mRNA GCA_005502385.1_02030 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLNEWKHADRNMQYRVVNALIKENIWTHSTTIFKENHYITIEFEQVLLNVHYKYESALSRYEFDGPIIYMNHQHKESVDSLENLLDILVTDFHIDIPFHLKSELIHSRDSFIEVYKEFDTRHEYLQRHDKYINDSERLNFFTWLEKLKKNNDIDDVLYSESLIFEGHPTHPLTKTKLPLSMEEVRTYSPEFEKIINLKVMLIHNEYVNVTTILDHSQFILNEVIPEYLDELHTFMNDRERLLKDYKVILVHPWQYEHTIRNKFKEWLQNHILISTPFHVPSKATSSFRTMSLINHPYHVKLPVNVQATSAVRTVSPETTIDGPKLSQALHRELNQYTQLDVVLEPYGLFAKTDSDDARQLACIIREKPFIKNDGILLVTGALVNKNVVDNEITVDSYLKWINDDINQHTIHQFMRNYTRQLVTPLLALIQDYGIALEAHMQNTLVHLGPKYQIQFIVRDLGGSRIDIKTLSQRLKHIEVENKSLLADSIEEVIMKFQHAVVQNQLAELIFHFKKYEFIKEEELFNIIQEEIEVAINDTKPHADTLRKVLFGPTITVKALLKMRMKKKVKKYLNISLDNPIKREVN . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 101010 102767 . + 0 GCA_005502385.1_02030 GCA_005502385.1_02030_gene,GCA_005502385.1_02030_mRNA GCA_005502385.1_02030 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLNEWKHADRNMQYRVVNALIKENIWTHSTTIFKENHYITIEFEQVLLNVHYKYESALSRYEFDGPIIYMNHQHKESVDSLENLLDILVTDFHIDIPFHLKSELIHSRDSFIEVYKEFDTRHEYLQRHDKYINDSERLNFFTWLEKLKKNNDIDDVLYSESLIFEGHPTHPLTKTKLPLSMEEVRTYSPEFEKIINLKVMLIHNEYVNVTTILDHSQFILNEVIPEYLDELHTFMNDRERLLKDYKVILVHPWQYEHTIRNKFKEWLQNHILISTPFHVPSKATSSFRTMSLINHPYHVKLPVNVQATSAVRTVSPETTIDGPKLSQALHRELNQYTQLDVVLEPYGLFAKTDSDDARQLACIIREKPFIKNDGILLVTGALVNKNVVDNEITVDSYLKWINDDINQHTIHQFMRNYTRQLVTPLLALIQDYGIALEAHMQNTLVHLGPKYQIQFIVRDLGGSRIDIKTLSQRLKHIEVENKSLLADSIEEVIMKFQHAVVQNQLAELIFHFKKYEFIKEEELFNIIQEEIEVAINDTKPHADTLRKVLFGPTITVKALLKMRMKKKVKKYLNISLDNPIKREVN persistent 585 Siderophore synthetase 6.3.2.57 WP_137689675.1 UPI00092685C1 UniRef100_UPI00092685C1,UniRef50_Q2FW72,UniRef90_A0A3S7GWH8 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 102768 103829 . + . GCA_005502385.1_02031_gene GCA_005502385.1_02031 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSRIVINLSKIEYNAHVLKMLFDSKNIAMIPVIKSIAGDEHIIKRLMKVGFNYFAESRLENIPQQFTKDCQFLLLRSPLKHQYEDLIKKSYVSIQTEMATIHQLNHIANEMSNQHQVILMVDWKDQREGVLPYDIVEYIHEIKLMNNIKLLGLAFNFMCFKSKAPTLNDIDEINQFVHHVQYETGVSFEVISGGNSSMLPLLKQYDLGCINELRIGETLFRGVDTTTNQNIPELFQNAILLEAEIIEIKPRYTKTKESYLQAIVDVGYIDTVIEKIKPLNHRIEIMGASSDHLMIDLKEEINYKVGDCIPFSLEYEALSQLMYHQRMEKYYSEEHTISQRINNLNQSKYINNK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 102768 103829 . + . GCA_005502385.1_02031_mRNA GCA_005502385.1_02031 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSRIVINLSKIEYNAHVLKMLFDSKNIAMIPVIKSIAGDEHIIKRLMKVGFNYFAESRLENIPQQFTKDCQFLLLRSPLKHQYEDLIKKSYVSIQTEMATIHQLNHIANEMSNQHQVILMVDWKDQREGVLPYDIVEYIHEIKLMNNIKLLGLAFNFMCFKSKAPTLNDIDEINQFVHHVQYETGVSFEVISGGNSSMLPLLKQYDLGCINELRIGETLFRGVDTTTNQNIPELFQNAILLEAEIIEIKPRYTKTKESYLQAIVDVGYIDTVIEKIKPLNHRIEIMGASSDHLMIDLKEEINYKVGDCIPFSLEYEALSQLMYHQRMEKYYSEEHTISQRINNLNQSKYINNK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 102768 103829 . + 0 GCA_005502385.1_02031 GCA_005502385.1_02031_gene,GCA_005502385.1_02031_mRNA GCA_005502385.1_02031 Ornithine racemase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSRIVINLSKIEYNAHVLKMLFDSKNIAMIPVIKSIAGDEHIIKRLMKVGFNYFAESRLENIPQQFTKDCQFLLLRSPLKHQYEDLIKKSYVSIQTEMATIHQLNHIANEMSNQHQVILMVDWKDQREGVLPYDIVEYIHEIKLMNNIKLLGLAFNFMCFKSKAPTLNDIDEINQFVHHVQYETGVSFEVISGGNSSMLPLLKQYDLGCINELRIGETLFRGVDTTTNQNIPELFQNAILLEAEIIEIKPRYTKTKESYLQAIVDVGYIDTVIEKIKPLNHRIEIMGASSDHLMIDLKEEINYKVGDCIPFSLEYEALSQLMYHQRMEKYYSEEHTISQRINNLNQSKYINNK persistent 353 Alanine racemase WP_017175374.1 UPI0002E56D82 UniRef100_A0A8X8GK68,UniRef50_A0A8X8GK68,UniRef90_A0A8X8GK68 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 104027 105025 . + . GCA_005502385.1_02032_gene GCA_005502385.1_02032 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKRTTIFGIISILLILVLTTACGKVSNNGSNSSNQISSSKDIIEIKHDLGTTKVPKDAKRVVALEFSFVDALVALDVKPVGIADDNKKNRIIKPLRDKIGNYTSVGTRKQPNLEEISKLKPDLIIADSNRHKGIYKELSKIAPTIELKSFDGDYNENIGAFKVIAKSLNKEKQGKKRLDEHKKKIAQYKQEIQFDKNEKVLPAVASKSGLLAHPSESYVGQLLGELGFKEALNKDVTKGLSKYLQGPYLQLNSETLSEINPERMFIMTNGASSNEPSYQELKKDPIWNKLDAVKNHKIDVVDRDTWARARGLISSEEMAKEIVEISKKDRNK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 104027 105025 . + . GCA_005502385.1_02032_mRNA GCA_005502385.1_02032 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKRTTIFGIISILLILVLTTACGKVSNNGSNSSNQISSSKDIIEIKHDLGTTKVPKDAKRVVALEFSFVDALVALDVKPVGIADDNKKNRIIKPLRDKIGNYTSVGTRKQPNLEEISKLKPDLIIADSNRHKGIYKELSKIAPTIELKSFDGDYNENIGAFKVIAKSLNKEKQGKKRLDEHKKKIAQYKQEIQFDKNEKVLPAVASKSGLLAHPSESYVGQLLGELGFKEALNKDVTKGLSKYLQGPYLQLNSETLSEINPERMFIMTNGASSNEPSYQELKKDPIWNKLDAVKNHKIDVVDRDTWARARGLISSEEMAKEIVEISKKDRNK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 104027 105025 . + 0 GCA_005502385.1_02032 GCA_005502385.1_02032_gene,GCA_005502385.1_02032_mRNA GCA_005502385.1_02032 Fe(3+)-citrate-binding protein YfmC GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKRTTIFGIISILLILVLTTACGKVSNNGSNSSNQISSSKDIIEIKHDLGTTKVPKDAKRVVALEFSFVDALVALDVKPVGIADDNKKNRIIKPLRDKIGNYTSVGTRKQPNLEEISKLKPDLIIADSNRHKGIYKELSKIAPTIELKSFDGDYNENIGAFKVIAKSLNKEKQGKKRLDEHKKKIAQYKQEIQFDKNEKVLPAVASKSGLLAHPSESYVGQLLGELGFKEALNKDVTKGLSKYLQGPYLQLNSETLSEINPERMFIMTNGASSNEPSYQELKKDPIWNKLDAVKNHKIDVVDRDTWARARGLISSEEMAKEIVEISKKDRNK persistent 332 Iron citrate ABC transporter substrate-binding protein WP_017175373.1 UPI0002E67833 UniRef100_A0A4Q9WTJ1,UniRef50_S2Y8V6,UniRef90_A0A974QMG4 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 105038 106069 . + . GCA_005502385.1_02033_gene GCA_005502385.1_02033 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTIQKSNRLSANKRSIKKRMTLTFSVSVCLLVIFVYLNLATGTLNIQTKDMYHYFFTSIENKQTFIIQSVRMPRMIVAILVGGALALAGLLMQSITRNPLASPQIFGVNAGASFIIVLVTVLMPTMGNYATYLAFIGAFIGGLTVYLLSGSTKKITPVKLALAGMAVHLFFSSLTQGIILLNEDSNSTVMFWLVGSLNGMKWKDVMIICPWILMGLIILIAFARQLTIMELGDTLAKSLGQKTEVIRIIIGLLVIIFAGTSVSIVGPIGFIGLIVPHIVKRYAPHNYFILIPLTFIVGANLLLLSDTLSRLITYPYESPVGIVTSFIGAFYFLFITLRRVKRI . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 105038 106069 . + . GCA_005502385.1_02033_mRNA GCA_005502385.1_02033 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTIQKSNRLSANKRSIKKRMTLTFSVSVCLLVIFVYLNLATGTLNIQTKDMYHYFFTSIENKQTFIIQSVRMPRMIVAILVGGALALAGLLMQSITRNPLASPQIFGVNAGASFIIVLVTVLMPTMGNYATYLAFIGAFIGGLTVYLLSGSTKKITPVKLALAGMAVHLFFSSLTQGIILLNEDSNSTVMFWLVGSLNGMKWKDVMIICPWILMGLIILIAFARQLTIMELGDTLAKSLGQKTEVIRIIIGLLVIIFAGTSVSIVGPIGFIGLIVPHIVKRYAPHNYFILIPLTFIVGANLLLLSDTLSRLITYPYESPVGIVTSFIGAFYFLFITLRRVKRI . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 105038 106069 . + 0 GCA_005502385.1_02033 GCA_005502385.1_02033_gene,GCA_005502385.1_02033_mRNA GCA_005502385.1_02033 putative siderophore transport system permease protein YfiZ GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTIQKSNRLSANKRSIKKRMTLTFSVSVCLLVIFVYLNLATGTLNIQTKDMYHYFFTSIENKQTFIIQSVRMPRMIVAILVGGALALAGLLMQSITRNPLASPQIFGVNAGASFIIVLVTVLMPTMGNYATYLAFIGAFIGGLTVYLLSGSTKKITPVKLALAGMAVHLFFSSLTQGIILLNEDSNSTVMFWLVGSLNGMKWKDVMIICPWILMGLIILIAFARQLTIMELGDTLAKSLGQKTEVIRIIIGLLVIIFAGTSVSIVGPIGFIGLIVPHIVKRYAPHNYFILIPLTFIVGANLLLLSDTLSRLITYPYESPVGIVTSFIGAFYFLFITLRRVKRI persistent 343 Iron ABC transporter permease WP_017175372.1 UPI0003076D90 UniRef100_A0A2A1MBC8,UniRef50_A0A380G4K5,UniRef90_A0A2A1MBC8 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 106066 107031 . + . GCA_005502385.1_02034_gene GCA_005502385.1_02034 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTHHSLAIRYALVVTILIISIFISLCVGATMYNPVKVINSLLIQDDFILNEYRIPRTLLGLIVGSSLAISGTIIQGVVKNPLASPDVIGMTKGASLAAIIIIMVFPNAPLIILPMGSFVGALIISLILSFLISQFNIKGSTLALIGLAIGAICTAIVQFLLIRNPMDANNALIWLTGSLYGHTIENVYSILPWFIITIPIVIALSHQLDILNLGDSIAIALGTRIKRIKMILLILSVMLAGSSISIVGGISFLGLIAPHIARKIVGYRHVHVVMMSGLIGAILILFSDGLARGIHPPLDIPVGVVIAIVGVPYFLLLLRRI . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 106066 107031 . + . GCA_005502385.1_02034_mRNA GCA_005502385.1_02034 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTHHSLAIRYALVVTILIISIFISLCVGATMYNPVKVINSLLIQDDFILNEYRIPRTLLGLIVGSSLAISGTIIQGVVKNPLASPDVIGMTKGASLAAIIIIMVFPNAPLIILPMGSFVGALIISLILSFLISQFNIKGSTLALIGLAIGAICTAIVQFLLIRNPMDANNALIWLTGSLYGHTIENVYSILPWFIITIPIVIALSHQLDILNLGDSIAIALGTRIKRIKMILLILSVMLAGSSISIVGGISFLGLIAPHIARKIVGYRHVHVVMMSGLIGAILILFSDGLARGIHPPLDIPVGVVIAIVGVPYFLLLLRRI . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 106066 107031 . + 0 GCA_005502385.1_02034 GCA_005502385.1_02034_gene,GCA_005502385.1_02034_mRNA GCA_005502385.1_02034 Fe(3+) dicitrate transport system permease protein FecD GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTHHSLAIRYALVVTILIISIFISLCVGATMYNPVKVINSLLIQDDFILNEYRIPRTLLGLIVGSSLAISGTIIQGVVKNPLASPDVIGMTKGASLAAIIIIMVFPNAPLIILPMGSFVGALIISLILSFLISQFNIKGSTLALIGLAIGAICTAIVQFLLIRNPMDANNALIWLTGSLYGHTIENVYSILPWFIITIPIVIALSHQLDILNLGDSIAIALGTRIKRIKMILLILSVMLAGSSISIVGGISFLGLIAPHIARKIVGYRHVHVVMMSGLIGAILILFSDGLARGIHPPLDIPVGVVIAIVGVPYFLLLLRRI persistent 321 fecD Iron-dicitrate transporter subunit FecD WP_017175371.1 UPI0002DB4976 UniRef100_A0A4Q9WRC6,UniRef50_A0A2K4AJP4,UniRef90_A0A974QMF7 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 107263 108633 . + . GCA_005502385.1_02035_gene GCA_005502385.1_02035 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MENYNKQEKIKGRIKFISMSIIGIILFLIPIPIVQDGEKQTTLPVAFLANWLKDLLGPAMSILIITIITLSTILTILFSTILKDKVKPGGLIANAFQVGPVWMILRVLAVVFAWMTYFKIGSKVIYSEDTGGLVFNDLLPTLVAVFLFAALFLPLLMEYGLLEFLGPLFRPIMRPLFTLPGRSAVDNLASFIGDGTVGVLITSRQYEKGIYSKRESIVISTTFSVVSITFAIVIAQTIGLQQKFFVFYLTVIVSCLVAAMIMPRIWPLNQIPDDFTKEVSESTRLEKLPEGKTALAHGFDEATIVGLKAPGVKEFFKTGIKTVIDMWFVILPVVMSIGTIATIIANYTPVFEIIGKPFIPILQLLQIPEAAKASETLLIGFADMFLPSILIATVHSELTRFVIGALSISQLIYLSEVGGVILGSKIPVSLGKLFMIFLIRTAITLPIIALMAHLLL . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 107263 108633 . + . GCA_005502385.1_02035_mRNA GCA_005502385.1_02035 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MENYNKQEKIKGRIKFISMSIIGIILFLIPIPIVQDGEKQTTLPVAFLANWLKDLLGPAMSILIITIITLSTILTILFSTILKDKVKPGGLIANAFQVGPVWMILRVLAVVFAWMTYFKIGSKVIYSEDTGGLVFNDLLPTLVAVFLFAALFLPLLMEYGLLEFLGPLFRPIMRPLFTLPGRSAVDNLASFIGDGTVGVLITSRQYEKGIYSKRESIVISTTFSVVSITFAIVIAQTIGLQQKFFVFYLTVIVSCLVAAMIMPRIWPLNQIPDDFTKEVSESTRLEKLPEGKTALAHGFDEATIVGLKAPGVKEFFKTGIKTVIDMWFVILPVVMSIGTIATIIANYTPVFEIIGKPFIPILQLLQIPEAAKASETLLIGFADMFLPSILIATVHSELTRFVIGALSISQLIYLSEVGGVILGSKIPVSLGKLFMIFLIRTAITLPIIALMAHLLL . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 107263 108633 . + 0 GCA_005502385.1_02035 GCA_005502385.1_02035_gene,GCA_005502385.1_02035_mRNA GCA_005502385.1_02035 hypothetical protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MENYNKQEKIKGRIKFISMSIIGIILFLIPIPIVQDGEKQTTLPVAFLANWLKDLLGPAMSILIITIITLSTILTILFSTILKDKVKPGGLIANAFQVGPVWMILRVLAVVFAWMTYFKIGSKVIYSEDTGGLVFNDLLPTLVAVFLFAALFLPLLMEYGLLEFLGPLFRPIMRPLFTLPGRSAVDNLASFIGDGTVGVLITSRQYEKGIYSKRESIVISTTFSVVSITFAIVIAQTIGLQQKFFVFYLTVIVSCLVAAMIMPRIWPLNQIPDDFTKEVSESTRLEKLPEGKTALAHGFDEATIVGLKAPGVKEFFKTGIKTVIDMWFVILPVVMSIGTIATIIANYTPVFEIIGKPFIPILQLLQIPEAAKASETLLIGFADMFLPSILIATVHSELTRFVIGALSISQLIYLSEVGGVILGSKIPVSLGKLFMIFLIRTAITLPIIALMAHLLL persistent 456 Nucleoside transporter/FeoB GTPase Gate domain-containing protein WP_029376782.1 UPI00044766A2 UniRef100_A0A3S7GZH0,UniRef50_B9DM72,UniRef90_A0A974QMD4 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 108691 109005 . - . GCA_005502385.1_02036_gene GCA_005502385.1_02036 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MFVVTNRITVKKGFAEKMAPRFTKGGKIEQLDGFRKIEVWQIDNTNDTEDMYVNTWWDNEENFKAWTQSDAFKEAHKNTGKSSTEDSPVVTSEIVKANVLSTLE . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 108691 109005 . - . GCA_005502385.1_02036_mRNA GCA_005502385.1_02036 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MFVVTNRITVKKGFAEKMAPRFTKGGKIEQLDGFRKIEVWQIDNTNDTEDMYVNTWWDNEENFKAWTQSDAFKEAHKNTGKSSTEDSPVVTSEIVKANVLSTLE . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 108691 109005 . - 0 GCA_005502385.1_02036 GCA_005502385.1_02036_gene,GCA_005502385.1_02036_mRNA GCA_005502385.1_02036 Heme oxygenase (staphylobilin-producing) 2 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MFVVTNRITVKKGFAEKMAPRFTKGGKIEQLDGFRKIEVWQIDNTNDTEDMYVNTWWDNEENFKAWTQSDAFKEAHKNTGKSSTEDSPVVTSEIVKANVLSTLE persistent 104 heme oxygenase 1.14.99.48 WP_048680627.1 UPI000661687C UniRef100_UPI000661687C,UniRef50_Q49ZB8,UniRef90_A0A974KVQ0 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 109182 109700 . + . GCA_005502385.1_02037_gene GCA_005502385.1_02037 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTGKTHVAAGLLVGAITVDHYHTDLFSTVTVICLAIAGSLLPDICHTRSKIGRQFKILSLLVSTIFGHRTFTHSLLFLGMIGFLLILIQTPTYYLVTIIGAMASHVILDMLTPRGVKLLYPIPLAIKFPFTFKTGGFLDASLSIAFSIGAIYIIFQEFINEILKYVSHSLSG . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 109182 109700 . + . GCA_005502385.1_02037_mRNA GCA_005502385.1_02037 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTGKTHVAAGLLVGAITVDHYHTDLFSTVTVICLAIAGSLLPDICHTRSKIGRQFKILSLLVSTIFGHRTFTHSLLFLGMIGFLLILIQTPTYYLVTIIGAMASHVILDMLTPRGVKLLYPIPLAIKFPFTFKTGGFLDASLSIAFSIGAIYIIFQEFINEILKYVSHSLSG . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 109182 109700 . + 0 GCA_005502385.1_02037 GCA_005502385.1_02037_gene,GCA_005502385.1_02037_mRNA GCA_005502385.1_02037 Inner membrane protein YdjM GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MTGKTHVAAGLLVGAITVDHYHTDLFSTVTVICLAIAGSLLPDICHTRSKIGRQFKILSLLVSTIFGHRTFTHSLLFLGMIGFLLILIQTPTYYLVTIIGAMASHVILDMLTPRGVKLLYPIPLAIKFPFTFKTGGFLDASLSIAFSIGAIYIIFQEFINEILKYVSHSLSG persistent 172 Metal-dependent hydrolase UniRef50_Q2FW80,UniRef90_A0A974KW04 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 109806 110993 . + . GCA_005502385.1_02038_gene GCA_005502385.1_02038 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLDQSKLEKYNQEHLIEYEKMMSSNEKEQLDEKVNSLDLEFIQELYQSLYVNRKTITDVTAVSEVDYKIKEAFTEQDREYYEHKGIEAIRNGEFAVVLMAGGQGTRLGYKGPKGSFEIEGVSLFELQARQLLHLKNETGHCINWYIMTSDINHEETLRYFENHDYFGYNPERIHFFKQDNIVALSENGRLIFNEKGYIMETPNGNGGIFKSLEHKGYLDKMEKDGVKFIFLNNIDNVLVKVLDPVFVGFTVVNDKDITSKSIQPKKGESVGRLVSKDNKDTVLEYSELDENVANTFDNANIGIHAFKLSFINQAVNNDLPYHLAIKKLKQLDDDFGLIEKTSLKFELFYFDIFRYANSFITLQVPRKEEFSPLKNKEGKDSVETATDDLKRMNVI . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 109806 110993 . + . GCA_005502385.1_02038_mRNA GCA_005502385.1_02038 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLDQSKLEKYNQEHLIEYEKMMSSNEKEQLDEKVNSLDLEFIQELYQSLYVNRKTITDVTAVSEVDYKIKEAFTEQDREYYEHKGIEAIRNGEFAVVLMAGGQGTRLGYKGPKGSFEIEGVSLFELQARQLLHLKNETGHCINWYIMTSDINHEETLRYFENHDYFGYNPERIHFFKQDNIVALSENGRLIFNEKGYIMETPNGNGGIFKSLEHKGYLDKMEKDGVKFIFLNNIDNVLVKVLDPVFVGFTVVNDKDITSKSIQPKKGESVGRLVSKDNKDTVLEYSELDENVANTFDNANIGIHAFKLSFINQAVNNDLPYHLAIKKLKQLDDDFGLIEKTSLKFELFYFDIFRYANSFITLQVPRKEEFSPLKNKEGKDSVETATDDLKRMNVI . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 109806 110993 . + 0 GCA_005502385.1_02038 GCA_005502385.1_02038_gene,GCA_005502385.1_02038_mRNA GCA_005502385.1_02038 putative uridylyltransferase GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLDQSKLEKYNQEHLIEYEKMMSSNEKEQLDEKVNSLDLEFIQELYQSLYVNRKTITDVTAVSEVDYKIKEAFTEQDREYYEHKGIEAIRNGEFAVVLMAGGQGTRLGYKGPKGSFEIEGVSLFELQARQLLHLKNETGHCINWYIMTSDINHEETLRYFENHDYFGYNPERIHFFKQDNIVALSENGRLIFNEKGYIMETPNGNGGIFKSLEHKGYLDKMEKDGVKFIFLNNIDNVLVKVLDPVFVGFTVVNDKDITSKSIQPKKGESVGRLVSKDNKDTVLEYSELDENVANTFDNANIGIHAFKLSFINQAVNNDLPYHLAIKKLKQLDDDFGLIEKTSLKFELFYFDIFRYANSFITLQVPRKEEFSPLKNKEGKDSVETATDDLKRMNVI persistent 395 UDPGP type 1 family protein 2.7.7.- WP_019835205.1 UPI00036E859B UniRef100_UPI00036E859B,UniRef50_Q2FW81,UniRef90_A0A3S7GWJ4 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 111010 111693 . + . GCA_005502385.1_02039_gene GCA_005502385.1_02039 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSKSSQHTKDNVIESFKDIIPLSFGEEIGNATSHGVAALMTLFLLPYAAVHSYNEYGTLSSISVSIFVISIFMMFISSTVYHSMKNNTSHKYILRIIDHSMIYVAISGTYTPVLLTVVGGWLGWLVFLLLWGTTIWGILYKSISTHVNPKLSLIVYLVMGWVGIIFLPVIIIRTSWLFILFIVLGGLSYTIGAWFYAQKNRPYFHMIWHIFIVIASLFHFIGIVYFM . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 111010 111693 . + . GCA_005502385.1_02039_mRNA GCA_005502385.1_02039 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSKSSQHTKDNVIESFKDIIPLSFGEEIGNATSHGVAALMTLFLLPYAAVHSYNEYGTLSSISVSIFVISIFMMFISSTVYHSMKNNTSHKYILRIIDHSMIYVAISGTYTPVLLTVVGGWLGWLVFLLLWGTTIWGILYKSISTHVNPKLSLIVYLVMGWVGIIFLPVIIIRTSWLFILFIVLGGLSYTIGAWFYAQKNRPYFHMIWHIFIVIASLFHFIGIVYFM . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 111010 111693 . + 0 GCA_005502385.1_02039 GCA_005502385.1_02039_gene,GCA_005502385.1_02039_mRNA GCA_005502385.1_02039 hypothetical protein UPF0073 inner membrane protein YqfA GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MSKSSQHTKDNVIESFKDIIPLSFGEEIGNATSHGVAALMTLFLLPYAAVHSYNEYGTLSSISVSIFVISIFMMFISSTVYHSMKNNTSHKYILRIIDHSMIYVAISGTYTPVLLTVVGGWLGWLVFLLLWGTTIWGILYKSISTHVNPKLSLIVYLVMGWVGIIFLPVIIIRTSWLFILFIVLGGLSYTIGAWFYAQKNRPYFHMIWHIFIVIASLFHFIGIVYFM persistent 227 Hemolysin III family protein WP_017175367.1 UPI0002F26426 UniRef100_A0A8X8GSG5,UniRef50_Q2FW82,UniRef90_A0A8X8GSG5 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 111882 113222 . + . GCA_005502385.1_02040_gene GCA_005502385.1_02040 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKLKSIGIVVTLVLTMFMAAIESSIISLALPTIRKDLNAGTAVPLVFTVYFIALVVANPIVGELLTRFKILYIAVVGLLLFGIGSFMSGMSETFIMLIISRAIQGLGAGVMMSLTQIVPKLAFEIPLRYKIMGIVGSVWGISSILGPLLGGGILEVATWHWLFYINIPIALIAIVLAFLTFHFPEEAEVQHIHFDVKGLSLFYIFIGLLMFSLLNKTGVTFNIIALILAIVILFVLFKYENKTDMPFLPISEFNKSISLVFITDLLIAICLMGYNLYIPVYLQDHLKLSPIQSGLVIFPLSVAWLALNFNLAKVESKFSRKKLYIGAFISLILSNMILVFGLHIPLIIARAVILAGLSFGFVYTKDSVIVQEETSPKYMKKMMSFYALTKNLGSSIGSTLMGSLYALQFGLLGGNFYNILTVITIVALILILMWAFLFEENKEGIK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 111882 113222 . + . GCA_005502385.1_02040_mRNA GCA_005502385.1_02040 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKLKSIGIVVTLVLTMFMAAIESSIISLALPTIRKDLNAGTAVPLVFTVYFIALVVANPIVGELLTRFKILYIAVVGLLLFGIGSFMSGMSETFIMLIISRAIQGLGAGVMMSLTQIVPKLAFEIPLRYKIMGIVGSVWGISSILGPLLGGGILEVATWHWLFYINIPIALIAIVLAFLTFHFPEEAEVQHIHFDVKGLSLFYIFIGLLMFSLLNKTGVTFNIIALILAIVILFVLFKYENKTDMPFLPISEFNKSISLVFITDLLIAICLMGYNLYIPVYLQDHLKLSPIQSGLVIFPLSVAWLALNFNLAKVESKFSRKKLYIGAFISLILSNMILVFGLHIPLIIARAVILAGLSFGFVYTKDSVIVQEETSPKYMKKMMSFYALTKNLGSSIGSTLMGSLYALQFGLLGGNFYNILTVITIVALILILMWAFLFEENKEGIK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 111882 113222 . + 0 GCA_005502385.1_02040 GCA_005502385.1_02040_gene,GCA_005502385.1_02040_mRNA GCA_005502385.1_02040 Multidrug efflux pump SdrM GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKLKSIGIVVTLVLTMFMAAIESSIISLALPTIRKDLNAGTAVPLVFTVYFIALVVANPIVGELLTRFKILYIAVVGLLLFGIGSFMSGMSETFIMLIISRAIQGLGAGVMMSLTQIVPKLAFEIPLRYKIMGIVGSVWGISSILGPLLGGGILEVATWHWLFYINIPIALIAIVLAFLTFHFPEEAEVQHIHFDVKGLSLFYIFIGLLMFSLLNKTGVTFNIIALILAIVILFVLFKYENKTDMPFLPISEFNKSISLVFITDLLIAICLMGYNLYIPVYLQDHLKLSPIQSGLVIFPLSVAWLALNFNLAKVESKFSRKKLYIGAFISLILSNMILVFGLHIPLIIARAVILAGLSFGFVYTKDSVIVQEETSPKYMKKMMSFYALTKNLGSSIGSTLMGSLYALQFGLLGGNFYNILTVITIVALILILMWAFLFEENKEGIK persistent 446 sdrM multidrug efflux MFS transporter SdrM UniRef50_Q99S97,UniRef90_A0A3S7GWI6 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 113297 113764 . + . GCA_005502385.1_02041_gene GCA_005502385.1_02041 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKFSNQKFNGIFPTLLILLIFILSGCIFLIFLGFGLFGLSRILIFLKLGFFTYNKDLFSNLVYYGSYIVFGYFLLFAIEHLMDYFRKQLPNNPYFNGTLFHLISYVITTILFYFVIHIHYVYIKIEFWVIALIIGILYLCKMIFYPDSEDLNDKK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 113297 113764 . + . GCA_005502385.1_02041_mRNA GCA_005502385.1_02041 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKFSNQKFNGIFPTLLILLIFILSGCIFLIFLGFGLFGLSRILIFLKLGFFTYNKDLFSNLVYYGSYIVFGYFLLFAIEHLMDYFRKQLPNNPYFNGTLFHLISYVITTILFYFVIHIHYVYIKIEFWVIALIIGILYLCKMIFYPDSEDLNDKK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 113297 113764 . + 0 GCA_005502385.1_02041 GCA_005502385.1_02041_gene,GCA_005502385.1_02041_mRNA GCA_005502385.1_02041 Multidrug resistance efflux pump SepA GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MKFSNQKFNGIFPTLLILLIFILSGCIFLIFLGFGLFGLSRILIFLKLGFFTYNKDLFSNLVYYGSYIVFGYFLLFAIEHLMDYFRKQLPNNPYFNGTLFHLISYVITTILFYFVIHIHYVYIKIEFWVIALIIGILYLCKMIFYPDSEDLNDKK persistent 155 sepA Multidrug resistance efflux pump SepA WP_017175365.1 UPI000305BD29 UniRef100_A0A4Q9WRD4,UniRef50_Q5HM62,UniRef90_A0A4Q9WRD4 . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka gene 113856 114920 . + . GCA_005502385.1_02042_gene GCA_005502385.1_02042 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLTVEQVKKIVGDLKDPIINVPLKETKGIVEVKIKEEIQHVSVKVAMAQLGGQPQLDLQMSVVKALKENGANTVGIRFEELPAEVVEKYTGKEKEKPKTIEGLLSQNNPVEFIAIASGKGGVGKSTIAVNLAVALAREGKRVGLIDADIYGFSVPDMMGIDEKPGVQGKEIIPVERHGVKVISMAFFVEENAPVIWRGPMLGKMLTNFFVEVKWGELDYLLLDLPPGTGDVALDVHSMLPSSKEIIVTTPHPTAAFVAARAGAMAKHTEHSILGVIENMSYFESKETGKKEYVFGKGGGRKLADELNTQLLGELPLEQPSWNPNDFSPSIYQEEDRLGKIYKTIAQKVIATTIK . . . . . . . GCA_005502385.1|SCOV01000007.1 prokka mRNA 113856 114920 . + . GCA_005502385.1_02042_mRNA GCA_005502385.1_02042 GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLTVEQVKKIVGDLKDPIINVPLKETKGIVEVKIKEEIQHVSVKVAMAQLGGQPQLDLQMSVVKALKENGANTVGIRFEELPAEVVEKYTGKEKEKPKTIEGLLSQNNPVEFIAIASGKGGVGKSTIAVNLAVALAREGKRVGLIDADIYGFSVPDMMGIDEKPGVQGKEIIPVERHGVKVISMAFFVEENAPVIWRGPMLGKMLTNFFVEVKWGELDYLLLDLPPGTGDVALDVHSMLPSSKEIIVTTPHPTAAFVAARAGAMAKHTEHSILGVIENMSYFESKETGKKEYVFGKGGGRKLADELNTQLLGELPLEQPSWNPNDFSPSIYQEEDRLGKIYKTIAQKVIATTIK . . . . . . . GCA_005502385.1|SCOV01000007.1 Prodigal:002006 CDS 113856 114920 . + 0 GCA_005502385.1_02042 GCA_005502385.1_02042_gene,GCA_005502385.1_02042_mRNA GCA_005502385.1_02042 Iron-sulfur cluster carrier protein GCA_005502385.1 SCOV01000007.1 GCA_005502385.1|SCOV01000007.1 GCA_005502385.1_SCOV01000007.1 MLTVEQVKKIVGDLKDPIINVPLKETKGIVEVKIKEEIQHVSVKVAMAQLGGQPQLDLQMSVVKALKENGANTVGIRFEELPAEVVEKYTGKEKEKPKTIEGLLSQNNPVEFIAIASGKGGVGKSTIAVNLAVALAREGKRVGLIDADIYGFSVPDMMGIDEKPGVQGKEIIPVERHGVKVISMAFFVEENAPVIWRGPMLGKMLTNFFVEVKWGELDYLLLDLPPGTGDVALDVHSMLPSSKEIIVTTPHPTAAFVAARAGAMAKHTEHSILGVIENMSYFESKETGKKEYVFGKGGGRKLADELNTQLLGELPLEQPSWNPNDFSPSIYQEEDRLGKIYKTIAQKVIATTIK persistent 354 mrp Iron-sulfur cluster carrier protein COG0489,D WP_017175364.1 UPI0002D728DD UniRef100_A0A3S7GWT8,UniRef50_A0A1I4PBJ5,UniRef90_A0A380FYV8 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 140 862 . - . GCA_005502385.1_02043_gene GCA_005502385.1_02043 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKRTEKYKDSYQYDDQYQQRNQKSREYQQRQQRRQSEENYRRNEPRQEYHHQNQGDYDENANRYYNDRDFRREQLLEEENEKNKKSKRWLIAIIAILLLIIGIFATKSYIDHKKESDNKQHTYNATNDVSKNYQQEVQNQSDNIKKQVEDAKNDIKDKIDTESRLRQIQSQIDKLKNNEITKEDSKLTQFYQDQVNKLKEANNAQQNNANENKVNALLDDVNNKVDDIKKKLNSILGNNN . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 140 862 . - . GCA_005502385.1_02043_mRNA GCA_005502385.1_02043 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKRTEKYKDSYQYDDQYQQRNQKSREYQQRQQRRQSEENYRRNEPRQEYHHQNQGDYDENANRYYNDRDFRREQLLEEENEKNKKSKRWLIAIIAILLLIIGIFATKSYIDHKKESDNKQHTYNATNDVSKNYQQEVQNQSDNIKKQVEDAKNDIKDKIDTESRLRQIQSQIDKLKNNEITKEDSKLTQFYQDQVNKLKEANNAQQNNANENKVNALLDDVNNKVDDIKKKLNSILGNNN . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 140 862 . - 0 GCA_005502385.1_02043 GCA_005502385.1_02043_gene,GCA_005502385.1_02043_mRNA GCA_005502385.1_02043 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKRTEKYKDSYQYDDQYQQRNQKSREYQQRQQRRQSEENYRRNEPRQEYHHQNQGDYDENANRYYNDRDFRREQLLEEENEKNKKSKRWLIAIIAILLLIIGIFATKSYIDHKKESDNKQHTYNATNDVSKNYQQEVQNQSDNIKKQVEDAKNDIKDKIDTESRLRQIQSQIDKLKNNEITKEDSKLTQFYQDQVNKLKEANNAQQNNANENKVNALLDDVNNKVDDIKKKLNSILGNNN persistent 240 hypothetical protein WP_002488783.1 UPI00024E1A22 UniRef100_A0A4Q9WR60,UniRef50_Q2FVI6,UniRef90_A0A974KZ90 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 878 2008 . - . GCA_005502385.1_02044_gene GCA_005502385.1_02044 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MVIAPDSFKESMSAKQAGLAIEQGFKNIFGDALKTEVIPMADGGEGTTEALIEALDATIHSIKVHDPLFREVTASYARSRDNHVAIIEMAAASGLDLIRTDERNPLITTTFGVGELIKDALNHNVTKIILGIGGSATNDGGSGMLTALGVKFLNSDNEEIELGGGALAHLTHIDASKLDYRLNDVTFEVACDVTNPLLGSNGATYIYGPQKGATEKMIPKLDSALANYHDMIEKAYHISVKDIPGAGAAGGLGAGILTFFNASLSNGIDIVLKETQFLQSIKDADLVITGEGKIDVQTIYGKTPIGVAKAAKQFDLPVIGICGSLGKNYQAVYQHGIDTVFSIIETPSELPYLLENGERFLTQTAENIARLIKLND . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 878 2008 . - . GCA_005502385.1_02044_mRNA GCA_005502385.1_02044 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MVIAPDSFKESMSAKQAGLAIEQGFKNIFGDALKTEVIPMADGGEGTTEALIEALDATIHSIKVHDPLFREVTASYARSRDNHVAIIEMAAASGLDLIRTDERNPLITTTFGVGELIKDALNHNVTKIILGIGGSATNDGGSGMLTALGVKFLNSDNEEIELGGGALAHLTHIDASKLDYRLNDVTFEVACDVTNPLLGSNGATYIYGPQKGATEKMIPKLDSALANYHDMIEKAYHISVKDIPGAGAAGGLGAGILTFFNASLSNGIDIVLKETQFLQSIKDADLVITGEGKIDVQTIYGKTPIGVAKAAKQFDLPVIGICGSLGKNYQAVYQHGIDTVFSIIETPSELPYLLENGERFLTQTAENIARLIKLND . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 878 2008 . - 0 GCA_005502385.1_02044 GCA_005502385.1_02044_gene,GCA_005502385.1_02044_mRNA GCA_005502385.1_02044 Glycerate 2-kinase GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MVIAPDSFKESMSAKQAGLAIEQGFKNIFGDALKTEVIPMADGGEGTTEALIEALDATIHSIKVHDPLFREVTASYARSRDNHVAIIEMAAASGLDLIRTDERNPLITTTFGVGELIKDALNHNVTKIILGIGGSATNDGGSGMLTALGVKFLNSDNEEIELGGGALAHLTHIDASKLDYRLNDVTFEVACDVTNPLLGSNGATYIYGPQKGATEKMIPKLDSALANYHDMIEKAYHISVKDIPGAGAAGGLGAGILTFFNASLSNGIDIVLKETQFLQSIKDADLVITGEGKIDVQTIYGKTPIGVAKAAKQFDLPVIGICGSLGKNYQAVYQHGIDTVFSIIETPSELPYLLENGERFLTQTAENIARLIKLND persistent 376 Glycerate kinase 2.7.1.165 UniRef50_Q9Z9P2,UniRef90_A0A8X8GRC7 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 2174 3670 . + . GCA_005502385.1_02045_gene GCA_005502385.1_02045 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSNFKQHEFYIWVIGLLLFYGYLGLIIPLHGIDWFFGSHQGISTFYHHFDNLNGRYISNLIELVAVRSVILRMIMYSIISVSIILLILKLIRQTFSIRHLMLATMLLLIIPNSVFSESYGSFGYFFSYAFGMICVLYNLYFISQILFIKDELKMYNVILFWISCFSGQLFAESLTFFVNLALFTTLIAYFVLKRKINFNLLIGFLLSLCGTLIMLINQTYINYLSDIQAMRAHIDGLGYVHKLRVTILNDLPRYMFFNHIIIVSMIAIVIIGLLIKNTRFQTFSKIRQMILMIGILVLPIYKIFIFEPFNFNQTTLITSYGLINFLLCFSFFVSISMASFIIVTDSYYRIILIVAFISIILSAIPIFFISEVTSQQFFIVYIMWCVILITLVTELHTLKQSYDNILKICVGCLLFVFIAIFTIVHFKYEARLNNIQTQIQQHRNEIIVKHLPFETYFYEMTPTEEIEKENFKEYYQISNNKQLKILPFDINVIEDRGD . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 2174 3670 . + . GCA_005502385.1_02045_mRNA GCA_005502385.1_02045 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSNFKQHEFYIWVIGLLLFYGYLGLIIPLHGIDWFFGSHQGISTFYHHFDNLNGRYISNLIELVAVRSVILRMIMYSIISVSIILLILKLIRQTFSIRHLMLATMLLLIIPNSVFSESYGSFGYFFSYAFGMICVLYNLYFISQILFIKDELKMYNVILFWISCFSGQLFAESLTFFVNLALFTTLIAYFVLKRKINFNLLIGFLLSLCGTLIMLINQTYINYLSDIQAMRAHIDGLGYVHKLRVTILNDLPRYMFFNHIIIVSMIAIVIIGLLIKNTRFQTFSKIRQMILMIGILVLPIYKIFIFEPFNFNQTTLITSYGLINFLLCFSFFVSISMASFIIVTDSYYRIILIVAFISIILSAIPIFFISEVTSQQFFIVYIMWCVILITLVTELHTLKQSYDNILKICVGCLLFVFIAIFTIVHFKYEARLNNIQTQIQQHRNEIIVKHLPFETYFYEMTPTEEIEKENFKEYYQISNNKQLKILPFDINVIEDRGD . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 2174 3670 . + 0 GCA_005502385.1_02045 GCA_005502385.1_02045_gene,GCA_005502385.1_02045_mRNA GCA_005502385.1_02045 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSNFKQHEFYIWVIGLLLFYGYLGLIIPLHGIDWFFGSHQGISTFYHHFDNLNGRYISNLIELVAVRSVILRMIMYSIISVSIILLILKLIRQTFSIRHLMLATMLLLIIPNSVFSESYGSFGYFFSYAFGMICVLYNLYFISQILFIKDELKMYNVILFWISCFSGQLFAESLTFFVNLALFTTLIAYFVLKRKINFNLLIGFLLSLCGTLIMLINQTYINYLSDIQAMRAHIDGLGYVHKLRVTILNDLPRYMFFNHIIIVSMIAIVIIGLLIKNTRFQTFSKIRQMILMIGILVLPIYKIFIFEPFNFNQTTLITSYGLINFLLCFSFFVSISMASFIIVTDSYYRIILIVAFISIILSAIPIFFISEVTSQQFFIVYIMWCVILITLVTELHTLKQSYDNILKICVGCLLFVFIAIFTIVHFKYEARLNNIQTQIQQHRNEIIVKHLPFETYFYEMTPTEEIEKENFKEYYQISNNKQLKILPFDINVIEDRGD persistent 498 Glucosyltransferase WP_017174978.1 UPI0002EB59C0 UniRef100_A0A3S7GWK9,UniRef50_A0A3S7GWK9,UniRef90_A0A3S7GWK9 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 3673 4053 . + . GCA_005502385.1_02046_gene GCA_005502385.1_02046 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKLKQTHYEIIKFVIVGGINTLDYYLVYLILLKLLHIHYMVSHIIGFIVSFIISYYLNCYFVYRVKPTLKKFLSFPLTQVVNMGMQSLFLYIFVRWFNFPSEIAPFVGLIVTIPITFILSKWILKD . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 3673 4053 . + . GCA_005502385.1_02046_mRNA GCA_005502385.1_02046 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKLKQTHYEIIKFVIVGGINTLDYYLVYLILLKLLHIHYMVSHIIGFIVSFIISYYLNCYFVYRVKPTLKKFLSFPLTQVVNMGMQSLFLYIFVRWFNFPSEIAPFVGLIVTIPITFILSKWILKD . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 3673 4053 . + 0 GCA_005502385.1_02046 GCA_005502385.1_02046_gene,GCA_005502385.1_02046_mRNA GCA_005502385.1_02046 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKLKQTHYEIIKFVIVGGINTLDYYLVYLILLKLLHIHYMVSHIIGFIVSFIISYYLNCYFVYRVKPTLKKFLSFPLTQVVNMGMQSLFLYIFVRWFNFPSEIAPFVGLIVTIPITFILSKWILKD persistent 126 gtrA GtrA family protein WP_017174977.1 UPI0002F0D9C4 UniRef100_A0A3S7GWE7,UniRef50_Q2FVI8,UniRef90_A0A3S7GWE7 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 4235 5110 . + . GCA_005502385.1_02047_gene GCA_005502385.1_02047 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTQNENLKLAQRGAYLSLVVYIVLSVAKYITGYVYDSAAVRADALNNMTDIVVSIAVIVGLKISIKPADKNHPYGHLKSENISTLFVSFIIMFVGIQVVIENAPRMLTNEHHIPNFITIIISMMSGVIMIGVYAINHRLAKQTKSSSLDSASKDNLSDGLVSIGTAIGLLFTQFGLPIIDVILATVLGCLIIYTGFGIFKDSIFALSDGFKEQDLEEYRSLVQEVTDVREVKNVKGRYHGSSIFLDVTIVVDANLSLQEAHDICDRVETHLEHNGISSVYVHPEPNTLNEK . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 4235 5110 . + . GCA_005502385.1_02047_mRNA GCA_005502385.1_02047 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTQNENLKLAQRGAYLSLVVYIVLSVAKYITGYVYDSAAVRADALNNMTDIVVSIAVIVGLKISIKPADKNHPYGHLKSENISTLFVSFIIMFVGIQVVIENAPRMLTNEHHIPNFITIIISMMSGVIMIGVYAINHRLAKQTKSSSLDSASKDNLSDGLVSIGTAIGLLFTQFGLPIIDVILATVLGCLIIYTGFGIFKDSIFALSDGFKEQDLEEYRSLVQEVTDVREVKNVKGRYHGSSIFLDVTIVVDANLSLQEAHDICDRVETHLEHNGISSVYVHPEPNTLNEK . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 4235 5110 . + 0 GCA_005502385.1_02047 GCA_005502385.1_02047_gene,GCA_005502385.1_02047_mRNA GCA_005502385.1_02047 Manganese efflux system protein MneS GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTQNENLKLAQRGAYLSLVVYIVLSVAKYITGYVYDSAAVRADALNNMTDIVVSIAVIVGLKISIKPADKNHPYGHLKSENISTLFVSFIIMFVGIQVVIENAPRMLTNEHHIPNFITIIISMMSGVIMIGVYAINHRLAKQTKSSSLDSASKDNLSDGLVSIGTAIGLLFTQFGLPIIDVILATVLGCLIIYTGFGIFKDSIFALSDGFKEQDLEEYRSLVQEVTDVREVKNVKGRYHGSSIFLDVTIVVDANLSLQEAHDICDRVETHLEHNGISSVYVHPEPNTLNEK persistent 291 Transporter WP_017174976.1 UPI0003114113 UniRef100_A0A4Q9WPT2,UniRef50_Q2FVK7,UniRef90_A0A974KXS6 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 5151 5594 . - . GCA_005502385.1_02048_gene GCA_005502385.1_02048 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKKSIFALMTMLSLGAAGLESGQAHAEEVSTSPSQQHQYQYHQSHTSNLNISSSNATTSSTSSRTQSVYQRFLAAGGTEEMWEKIVLPESGGNPNASNGQYHGLGQTNQSWGYGSVETQTKGMIQYAKERYGSIGAAIRFRESNGWW . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 5151 5594 . - . GCA_005502385.1_02048_mRNA GCA_005502385.1_02048 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKKSIFALMTMLSLGAAGLESGQAHAEEVSTSPSQQHQYQYHQSHTSNLNISSSNATTSSTSSRTQSVYQRFLAAGGTEEMWEKIVLPESGGNPNASNGQYHGLGQTNQSWGYGSVETQTKGMIQYAKERYGSIGAAIRFRESNGWW . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 5151 5594 . - 0 GCA_005502385.1_02048 GCA_005502385.1_02048_gene,GCA_005502385.1_02048_mRNA GCA_005502385.1_02048 hypothetical protein """""" GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKKSIFALMTMLSLGAAGLESGQAHAEEVSTSPSQQHQYQYHQSHTSNLNISSSNATTSSTSSRTQSVYQRFLAAGGTEEMWEKIVLPESGGNPNASNGQYHGLGQTNQSWGYGSVETQTKGMIQYAKERYGSIGAAIRFRESNGWW persistent 147 Transglycosylase WP_017174975.1 UPI0002EB58D0 UniRef100_A0A8X8KEZ2,UniRef50_A0A4U9TDQ3,UniRef90_A0A8X8KEZ2 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 5943 6629 . + . GCA_005502385.1_02049_gene GCA_005502385.1_02049 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MPKLILCRHGQSEWNAKNLFTGWEDVQLSEQGRNEAITSGKKLKENKIEIDVAYTSLLTRALETTQYLLAESDQEWIPVHKSWRLNERHYGKLQGLNKDDARKEFGEEQVHQWRRSYDVLPPAQTEEQRQSYLNDRRYRHLDHRMMPYSESLKTTLERVIPIWTDHISQHLLDGDTVLVAAHGNSIRALIKYLENVSDEDIIGYEIKTGAPLIYELDDDLKVTNHYYL . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 5943 6629 . + . GCA_005502385.1_02049_mRNA GCA_005502385.1_02049 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MPKLILCRHGQSEWNAKNLFTGWEDVQLSEQGRNEAITSGKKLKENKIEIDVAYTSLLTRALETTQYLLAESDQEWIPVHKSWRLNERHYGKLQGLNKDDARKEFGEEQVHQWRRSYDVLPPAQTEEQRQSYLNDRRYRHLDHRMMPYSESLKTTLERVIPIWTDHISQHLLDGDTVLVAAHGNSIRALIKYLENVSDEDIIGYEIKTGAPLIYELDDDLKVTNHYYL . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 5943 6629 . + 0 GCA_005502385.1_02049 GCA_005502385.1_02049_gene,GCA_005502385.1_02049_mRNA GCA_005502385.1_02049 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MPKLILCRHGQSEWNAKNLFTGWEDVQLSEQGRNEAITSGKKLKENKIEIDVAYTSLLTRALETTQYLLAESDQEWIPVHKSWRLNERHYGKLQGLNKDDARKEFGEEQVHQWRRSYDVLPPAQTEEQRQSYLNDRRYRHLDHRMMPYSESLKTTLERVIPIWTDHISQHLLDGDTVLVAAHGNSIRALIKYLENVSDEDIIGYEIKTGAPLIYELDDDLKVTNHYYL persistent 228 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase 5.4.2.11 GO:0006094,GO:0006096,GO:0046538 COG0588,G WP_017174974.1 UPI0002FB5C76 UniRef100_A0A4Q9WP02,UniRef50_A1WWH7,UniRef90_Q4L8T0 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 6763 6861 . - . GCA_005502385.1_02050_gene GCA_005502385.1_02050 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKQDLQTARRNLKSSNIKTRKRALKMIKQYRR . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 6763 6861 . - . GCA_005502385.1_02050_mRNA GCA_005502385.1_02050 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKQDLQTARRNLKSSNIKTRKRALKMIKQYRR . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 6763 6861 . - 0 GCA_005502385.1_02050 GCA_005502385.1_02050_gene,GCA_005502385.1_02050_mRNA GCA_005502385.1_02050 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKQDLQTARRNLKSSNIKTRKRALKMIKQYRR persistent 32 Metal homeostasis protein WP_017174973.1 UPI00036309B7 UniRef100_A0A4Q9WQ93,UniRef50_Q49ZZ1,UniRef90_A0A6N0I1Y5 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 6957 8396 . + . GCA_005502385.1_02051_gene GCA_005502385.1_02051 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSHSKKLIMIFTMLLGGFFGLLNETLLTTALPRIMKDFHIAYSQVQWLTTAFLLTNGVVIPLSAFIIQRYTTRQVFLTGIIIFFLGTLLGGFSPNFTTLLIARIIQALGSGIMMPLMMTTILDIFEPHERGKYMGMFGLVIGLAPAIGPTLSGYLVEYINWRALFYVVAPISAVTFILALIFIKNVGVKVKAPIDMLSIILSIIGFGGMLYGVSSISQKGWNDPVVLSTIILGIIFVVLFIWRQERLETPLLSFKVFKNSQFAVGIAIMAVTMISMIGSETVLPMFVQNVLQRTPVDSGLILLPGAIVMAIMSIISGRLYETFGARVLSMIGMIIVTITTSYFVVMDEHTSTIVLATIYAIRMIGIALGLMPVMTHTMNQLTPELNAHGSSMTNTIQQVAGSIGTAGLVTILSVASQHFKPTPSDYQGMAKTEMMKHIQTDAMIHGYHSGFLFAVIITVVSLLLTFLLKRKKDINEESY . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 6957 8396 . + . GCA_005502385.1_02051_mRNA GCA_005502385.1_02051 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSHSKKLIMIFTMLLGGFFGLLNETLLTTALPRIMKDFHIAYSQVQWLTTAFLLTNGVVIPLSAFIIQRYTTRQVFLTGIIIFFLGTLLGGFSPNFTTLLIARIIQALGSGIMMPLMMTTILDIFEPHERGKYMGMFGLVIGLAPAIGPTLSGYLVEYINWRALFYVVAPISAVTFILALIFIKNVGVKVKAPIDMLSIILSIIGFGGMLYGVSSISQKGWNDPVVLSTIILGIIFVVLFIWRQERLETPLLSFKVFKNSQFAVGIAIMAVTMISMIGSETVLPMFVQNVLQRTPVDSGLILLPGAIVMAIMSIISGRLYETFGARVLSMIGMIIVTITTSYFVVMDEHTSTIVLATIYAIRMIGIALGLMPVMTHTMNQLTPELNAHGSSMTNTIQQVAGSIGTAGLVTILSVASQHFKPTPSDYQGMAKTEMMKHIQTDAMIHGYHSGFLFAVIITVVSLLLTFLLKRKKDINEESY . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 6957 8396 . + 0 GCA_005502385.1_02051 GCA_005502385.1_02051_gene,GCA_005502385.1_02051_mRNA GCA_005502385.1_02051 Multidrug resistance protein Stp GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSHSKKLIMIFTMLLGGFFGLLNETLLTTALPRIMKDFHIAYSQVQWLTTAFLLTNGVVIPLSAFIIQRYTTRQVFLTGIIIFFLGTLLGGFSPNFTTLLIARIIQALGSGIMMPLMMTTILDIFEPHERGKYMGMFGLVIGLAPAIGPTLSGYLVEYINWRALFYVVAPISAVTFILALIFIKNVGVKVKAPIDMLSIILSIIGFGGMLYGVSSISQKGWNDPVVLSTIILGIIFVVLFIWRQERLETPLLSFKVFKNSQFAVGIAIMAVTMISMIGSETVLPMFVQNVLQRTPVDSGLILLPGAIVMAIMSIISGRLYETFGARVLSMIGMIIVTITTSYFVVMDEHTSTIVLATIYAIRMIGIALGLMPVMTHTMNQLTPELNAHGSSMTNTIQQVAGSIGTAGLVTILSVASQHFKPTPSDYQGMAKTEMMKHIQTDAMIHGYHSGFLFAVIITVVSLLLTFLLKRKKDINEESY persistent 479 Drug:proton antiporter WP_070436312.1 UPI0008A33ED0 UniRef100_UPI0008A33ED0,UniRef50_A0A660A2M0,UniRef90_A0A974KZ27 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 8515 9315 . + . GCA_005502385.1_02052_gene GCA_005502385.1_02052 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKRLLFVALTLIFVLAACGNSDSSDKNSDSKSSSSNSDKKTLRVGTEGTYAPFTFHNKKDQLTGYDIDVIKAVAKEEGYKLKFNETSWDSMFAGLDAKRFDVIANQVGINKERKEKYKFSNPYTYSSGVLVVRDDEKNIKSFDDVKGEKLAQTFTSNYGKLAKDKGANITKVDGFNQSIDLLLSKRVDGTFNDSLSYLDYKKQKPNAKIKAIKGDAEQNKSAFAFSKSVDDKVVSDFNDGLKKLKENGELAKIGEKWFGENVSEPK . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 8515 9315 . + . GCA_005502385.1_02052_mRNA GCA_005502385.1_02052 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKRLLFVALTLIFVLAACGNSDSSDKNSDSKSSSSNSDKKTLRVGTEGTYAPFTFHNKKDQLTGYDIDVIKAVAKEEGYKLKFNETSWDSMFAGLDAKRFDVIANQVGINKERKEKYKFSNPYTYSSGVLVVRDDEKNIKSFDDVKGEKLAQTFTSNYGKLAKDKGANITKVDGFNQSIDLLLSKRVDGTFNDSLSYLDYKKQKPNAKIKAIKGDAEQNKSAFAFSKSVDDKVVSDFNDGLKKLKENGELAKIGEKWFGENVSEPK . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 8515 9315 . + 0 GCA_005502385.1_02052 GCA_005502385.1_02052_gene,GCA_005502385.1_02052_mRNA GCA_005502385.1_02052 putative amino-acid ABC transporter-binding protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKRLLFVALTLIFVLAACGNSDSSDKNSDSKSSSSNSDKKTLRVGTEGTYAPFTFHNKKDQLTGYDIDVIKAVAKEEGYKLKFNETSWDSMFAGLDAKRFDVIANQVGINKERKEKYKFSNPYTYSSGVLVVRDDEKNIKSFDDVKGEKLAQTFTSNYGKLAKDKGANITKVDGFNQSIDLLLSKRVDGTFNDSLSYLDYKKQKPNAKIKAIKGDAEQNKSAFAFSKSVDDKVVSDFNDGLKKLKENGELAKIGEKWFGENVSEPK persistent 266 Amino acid ABC transporter substrate-binding protein WP_070436311.1 UPI0008A17F36 UniRef100_UPI0008A17F36,UniRef50_B9DL83,UniRef90_A0A1L8Y736 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 9290 10015 . + . GCA_005502385.1_02053_gene GCA_005502385.1_02053 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKMFLSLNSQQQHALDAATQAFGPMLEGLVKYSIPITIVTFILGLIIALFTALMRISSSKVLRGIARVYVSIIRGTPMIVQLFIIFYGIPELGRLITGNAEEQWTLSSVVSAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMNYRQTIQRIILPQAIRVSVPALGNTFLGLIKDTSLLGFILVAEMFRKAQEVASTTYEYFTIYILVAVMYWVVCFIISVIQGFYESYIERGYKA . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 9290 10015 . + . GCA_005502385.1_02053_mRNA GCA_005502385.1_02053 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKMFLSLNSQQQHALDAATQAFGPMLEGLVKYSIPITIVTFILGLIIALFTALMRISSSKVLRGIARVYVSIIRGTPMIVQLFIIFYGIPELGRLITGNAEEQWTLSSVVSAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMNYRQTIQRIILPQAIRVSVPALGNTFLGLIKDTSLLGFILVAEMFRKAQEVASTTYEYFTIYILVAVMYWVVCFIISVIQGFYESYIERGYKA . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 9290 10015 . + 0 GCA_005502385.1_02053 GCA_005502385.1_02053_gene,GCA_005502385.1_02053_mRNA GCA_005502385.1_02053 L-cystine transport system permease protein TcyB GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKMFLSLNSQQQHALDAATQAFGPMLEGLVKYSIPITIVTFILGLIIALFTALMRISSSKVLRGIARVYVSIIRGTPMIVQLFIIFYGIPELGRLITGNAEEQWTLSSVVSAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMNYRQTIQRIILPQAIRVSVPALGNTFLGLIKDTSLLGFILVAEMFRKAQEVASTTYEYFTIYILVAVMYWVVCFIISVIQGFYESYIERGYKA persistent 241 hisM Cystine transport system permease protein COG0765,E UniRef50_B9DL82,UniRef90_A0A380FZ58 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 10012 10743 . + . GCA_005502385.1_02054_gene GCA_005502385.1_02054 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIELSNIHKSFNDKEVIKGIDLNVKKGEVVTLIGRSGSGKTTLLRMINALEIPTEGNVTVNDKTYTAKDKKSQIEVRKQSGMVFQSYNLFPHKTALENVMEGLVTVKKMSKSEARDRALGLLEKVGLTHVKDQRPHALSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVNDVLKVIKELANEGMTMVIVTHAMRFAKEVSNKVVFIHDGEIGEEGSPEELFNHPKTDELRRFLNVINKN . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 10012 10743 . + . GCA_005502385.1_02054_mRNA GCA_005502385.1_02054 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIELSNIHKSFNDKEVIKGIDLNVKKGEVVTLIGRSGSGKTTLLRMINALEIPTEGNVTVNDKTYTAKDKKSQIEVRKQSGMVFQSYNLFPHKTALENVMEGLVTVKKMSKSEARDRALGLLEKVGLTHVKDQRPHALSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVNDVLKVIKELANEGMTMVIVTHAMRFAKEVSNKVVFIHDGEIGEEGSPEELFNHPKTDELRRFLNVINKN . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 10012 10743 . + 0 GCA_005502385.1_02054 GCA_005502385.1_02054_gene,GCA_005502385.1_02054_mRNA GCA_005502385.1_02054 L-cystine import ATP-binding protein TcyC GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIELSNIHKSFNDKEVIKGIDLNVKKGEVVTLIGRSGSGKTTLLRMINALEIPTEGNVTVNDKTYTAKDKKSQIEVRKQSGMVFQSYNLFPHKTALENVMEGLVTVKKMSKSEARDRALGLLEKVGLTHVKDQRPHALSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVNDVLKVIKELANEGMTMVIVTHAMRFAKEVSNKVVFIHDGEIGEEGSPEELFNHPKTDELRRFLNVINKN persistent 243 Amino acid ABC transporter ATP-binding protein WP_070436310.1 UPI0008A1A8C7 UniRef100_UPI0008A1A8C7,UniRef50_A0A564T2N1,UniRef90_A0A3S7GVZ5 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 10846 11268 . - . GCA_005502385.1_02055_gene GCA_005502385.1_02055 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKYSMFSIGDTFISKHYKITEKEILEFAHQFDPQYMHLDKKKAGQGMYKGIIASGMHTLSLSFKLWIEENKYEEDIIARTHLNNVTFIKPVYPNDNLYVKVKVLDKKLKKQFGSLTVEVMTFNQYENKVLQFELTVLLSV . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 10846 11268 . - . GCA_005502385.1_02055_mRNA GCA_005502385.1_02055 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKYSMFSIGDTFISKHYKITEKEILEFAHQFDPQYMHLDKKKAGQGMYKGIIASGMHTLSLSFKLWIEENKYEEDIIARTHLNNVTFIKPVYPNDNLYVKVKVLDKKLKKQFGSLTVEVMTFNQYENKVLQFELTVLLSV . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 10846 11268 . - 0 GCA_005502385.1_02055 GCA_005502385.1_02055_gene,GCA_005502385.1_02055_mRNA GCA_005502385.1_02055 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKYSMFSIGDTFISKHYKITEKEILEFAHQFDPQYMHLDKKKAGQGMYKGIIASGMHTLSLSFKLWIEENKYEEDIIARTHLNNVTFIKPVYPNDNLYVKVKVLDKKLKKQFGSLTVEVMTFNQYENKVLQFELTVLLSV persistent 140 MaoC-like domain-containing protein WP_017174969.1 UPI0003175204 UniRef100_A0A4Q9WNZ0,UniRef50_P96670,UniRef90_A0A4Q9WNZ0 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 11309 12556 . - . GCA_005502385.1_02056_gene GCA_005502385.1_02056 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKFVSLTPEEFEKFTSEHFSHYTQSRIHLDNRNEMKHDVHVVGVKDDSGDVIAATLMTEARALKFYKYFYTHRGPVMDYSNIKLVHFFFKSLTEYLKKQNCLFVLVDPYILENLRNADGEILKSYDNRAVIKTLEDLGYKHQGWSVGYSTMSQIRWLSVLDLKDKTEDQLLKEMDYQTRRNIKKTYEMGVKVKTLPMEDTHTFFELFQMAEEKHGFKFRDEPYFYEMQKTYKDHAMLKLAYIDLKDYLSTLQHKHEDLTKQLTEIEEVLKESPNSKKNKNKRNQLQQQFDSNERKINQTKDKIAAEGEVLNLAAALYIYNEHEVYYLSSGSNPKYNEYMGAYRLQWEMIKFAKEHNIDRYNFYGITGDFSENAEDYGVQQFKKGFNAGVYEYIGDFIKPIKPVLYHTQQWIKNRR . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 11309 12556 . - . GCA_005502385.1_02056_mRNA GCA_005502385.1_02056 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKFVSLTPEEFEKFTSEHFSHYTQSRIHLDNRNEMKHDVHVVGVKDDSGDVIAATLMTEARALKFYKYFYTHRGPVMDYSNIKLVHFFFKSLTEYLKKQNCLFVLVDPYILENLRNADGEILKSYDNRAVIKTLEDLGYKHQGWSVGYSTMSQIRWLSVLDLKDKTEDQLLKEMDYQTRRNIKKTYEMGVKVKTLPMEDTHTFFELFQMAEEKHGFKFRDEPYFYEMQKTYKDHAMLKLAYIDLKDYLSTLQHKHEDLTKQLTEIEEVLKESPNSKKNKNKRNQLQQQFDSNERKINQTKDKIAAEGEVLNLAAALYIYNEHEVYYLSSGSNPKYNEYMGAYRLQWEMIKFAKEHNIDRYNFYGITGDFSENAEDYGVQQFKKGFNAGVYEYIGDFIKPIKPVLYHTQQWIKNRR . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 11309 12556 . - 0 GCA_005502385.1_02056 GCA_005502385.1_02056_gene,GCA_005502385.1_02056_mRNA GCA_005502385.1_02056 Aminoacyltransferase FemA GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKFVSLTPEEFEKFTSEHFSHYTQSRIHLDNRNEMKHDVHVVGVKDDSGDVIAATLMTEARALKFYKYFYTHRGPVMDYSNIKLVHFFFKSLTEYLKKQNCLFVLVDPYILENLRNADGEILKSYDNRAVIKTLEDLGYKHQGWSVGYSTMSQIRWLSVLDLKDKTEDQLLKEMDYQTRRNIKKTYEMGVKVKTLPMEDTHTFFELFQMAEEKHGFKFRDEPYFYEMQKTYKDHAMLKLAYIDLKDYLSTLQHKHEDLTKQLTEIEEVLKESPNSKKNKNKRNQLQQQFDSNERKINQTKDKIAAEGEVLNLAAALYIYNEHEVYYLSSGSNPKYNEYMGAYRLQWEMIKFAKEHNIDRYNFYGITGDFSENAEDYGVQQFKKGFNAGVYEYIGDFIKPIKPVLYHTQQWIKNRR persistent 415 femA Aminoacyltransferase FemA 2.3.2.- WP_070436309.1 UPI0008A3418A UniRef100_UPI0008A3418A,UniRef50_B9DMC1,UniRef90_A0AAE5JNR0 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 12824 13183 . + . GCA_005502385.1_02057_gene GCA_005502385.1_02057 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKRLILSLSVCVILLAGCGNDEYANKIDKAVKLQDKKQERLARNEQGDVVKHFDKKDANIYVYEKGKYVVLAYRPLSNNDEMHYYTYQFKDKKATYLEHFDTKQYISTHDSDYKEENLN . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 12824 13183 . + . GCA_005502385.1_02057_mRNA GCA_005502385.1_02057 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKRLILSLSVCVILLAGCGNDEYANKIDKAVKLQDKKQERLARNEQGDVVKHFDKKDANIYVYEKGKYVVLAYRPLSNNDEMHYYTYQFKDKKATYLEHFDTKQYISTHDSDYKEENLN . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 12824 13183 . + 0 GCA_005502385.1_02057 GCA_005502385.1_02057_gene,GCA_005502385.1_02057_mRNA GCA_005502385.1_02057 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKRLILSLSVCVILLAGCGNDEYANKIDKAVKLQDKKQERLARNEQGDVVKHFDKKDANIYVYEKGKYVVLAYRPLSNNDEMHYYTYQFKDKKATYLEHFDTKQYISTHDSDYKEENLN persistent 119 DUF4467 domain-containing protein WP_017174967.1 UPI000305571A UniRef100_A0A4V2KX19,UniRef50_A0A853V0S1,UniRef90_A0A974QNI4 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 13208 13804 . + . GCA_005502385.1_02058_gene GCA_005502385.1_02058 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKKLIFIGAGIICLIIIVVACSRNKKETIPAHTKNGKILIVEYGDYKCPYCKKIEDNVMPIIKKDYIDTNRVEYQFINASFLGKDSLMGSRAGNAIQSIAPKEYLTFQKNIYAHQQEEKKHWITETLLDKEIDQLNISQKQKDRIKKEYKTKNSGAWKEAEKQKKLTKENHIQSVPTVFINGKKVEDPYKVKEWEKYL . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 13208 13804 . + . GCA_005502385.1_02058_mRNA GCA_005502385.1_02058 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKKLIFIGAGIICLIIIVVACSRNKKETIPAHTKNGKILIVEYGDYKCPYCKKIEDNVMPIIKKDYIDTNRVEYQFINASFLGKDSLMGSRAGNAIQSIAPKEYLTFQKNIYAHQQEEKKHWITETLLDKEIDQLNISQKQKDRIKKEYKTKNSGAWKEAEKQKKLTKENHIQSVPTVFINGKKVEDPYKVKEWEKYL . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 13208 13804 . + 0 GCA_005502385.1_02058 GCA_005502385.1_02058_gene,GCA_005502385.1_02058_mRNA GCA_005502385.1_02058 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKKLIFIGAGIICLIIIVVACSRNKKETIPAHTKNGKILIVEYGDYKCPYCKKIEDNVMPIIKKDYIDTNRVEYQFINASFLGKDSLMGSRAGNAIQSIAPKEYLTFQKNIYAHQQEEKKHWITETLLDKEIDQLNISQKQKDRIKKEYKTKNSGAWKEAEKQKKLTKENHIQSVPTVFINGKKVEDPYKVKEWEKYL persistent 198 dsbA Protein-disulfide isomerase, DsbA UniRef50_A0A380FWH2 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 14105 14620 . + . GCA_005502385.1_02059_gene GCA_005502385.1_02059 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MANFNLDPVHSGVNFSIQHLVISNVKGRFNDFDADITGDFHDLSSLKGTFTVQANSIDTKVEDRDNHLKSEDFLNVEQYPEIKFEIISVDDHSVTGNVTIKDQTQKETFDLDYKGISLNPLNNKNTAGLVITGELDREKYGVTFNQPLETGGFLLGKTLNVEFDLEFPIEE . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 14105 14620 . + . GCA_005502385.1_02059_mRNA GCA_005502385.1_02059 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MANFNLDPVHSGVNFSIQHLVISNVKGRFNDFDADITGDFHDLSSLKGTFTVQANSIDTKVEDRDNHLKSEDFLNVEQYPEIKFEIISVDDHSVTGNVTIKDQTQKETFDLDYKGISLNPLNNKNTAGLVITGELDREKYGVTFNQPLETGGFLLGKTLNVEFDLEFPIEE . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 14105 14620 . + 0 GCA_005502385.1_02059 GCA_005502385.1_02059_gene,GCA_005502385.1_02059_mRNA GCA_005502385.1_02059 hypothetical protein UPF0312 protein SA2479 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MANFNLDPVHSGVNFSIQHLVISNVKGRFNDFDADITGDFHDLSSLKGTFTVQANSIDTKVEDRDNHLKSEDFLNVEQYPEIKFEIISVDDHSVTGNVTIKDQTQKETFDLDYKGISLNPLNNKNTAGLVITGELDREKYGVTFNQPLETGGFLLGKTLNVEFDLEFPIEE persistent 171 yceI YceI family protein WP_019834820.1 UPI00037D0D43 UniRef100_A0A8I1BD58,UniRef50_Q2FUS9,UniRef90_A0A3S7GZ26 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 14732 15202 . + . GCA_005502385.1_02060_gene GCA_005502385.1_02060 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSIDVKENKIIFKRTFKAPINDVFDAYTNPSLFEQWFHPQGAKTKVYRFNTEEGGEAFFAIETSEQTSYTLTEYRKVDRPKYLEYFDYFATPEGKKDTRLPGMHISINFNSDNKQMTTITSTSVFPTKEAAQQAVGMGIEAGMNSTLDQLEVLLNE . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 14732 15202 . + . GCA_005502385.1_02060_mRNA GCA_005502385.1_02060 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSIDVKENKIIFKRTFKAPINDVFDAYTNPSLFEQWFHPQGAKTKVYRFNTEEGGEAFFAIETSEQTSYTLTEYRKVDRPKYLEYFDYFATPEGKKDTRLPGMHISINFNSDNKQMTTITSTSVFPTKEAAQQAVGMGIEAGMNSTLDQLEVLLNE . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 14732 15202 . + 0 GCA_005502385.1_02060 GCA_005502385.1_02060_gene,GCA_005502385.1_02060_mRNA GCA_005502385.1_02060 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSIDVKENKIIFKRTFKAPINDVFDAYTNPSLFEQWFHPQGAKTKVYRFNTEEGGEAFFAIETSEQTSYTLTEYRKVDRPKYLEYFDYFATPEGKKDTRLPGMHISINFNSDNKQMTTITSTSVFPTKEAAQQAVGMGIEAGMNSTLDQLEVLLNE persistent 156 Glutathione S-transferase WP_019834821.1 UPI000367217C UniRef100_UPI000367217C,UniRef50_Q5HLI9,UniRef90_A0A3S7GZY9 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 15274 15456 . + . GCA_005502385.1_02061_gene GCA_005502385.1_02061 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKERYLKVLGLFSISTLIPTLLINSKCLNNGVIKYILRTALGYGIFASGLRYFSKLKKAH . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 15274 15456 . + . GCA_005502385.1_02061_mRNA GCA_005502385.1_02061 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKERYLKVLGLFSISTLIPTLLINSKCLNNGVIKYILRTALGYGIFASGLRYFSKLKKAH . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 15274 15456 . + 0 GCA_005502385.1_02061 GCA_005502385.1_02061_gene,GCA_005502385.1_02061_mRNA GCA_005502385.1_02061 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKERYLKVLGLFSISTLIPTLLINSKCLNNGVIKYILRTALGYGIFASGLRYFSKLKKAH persistent 60 hypothetical protein WP_002448340.1 UPI00019FCD4C UniRef100_A0A1L8Y746,UniRef50_Q2G1U7,UniRef90_A0A1L8Y746 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 15581 16399 . + . GCA_005502385.1_02062_gene GCA_005502385.1_02062 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTSNHTTIEDTYTTKDLIKAAVRQVQMKEVMATQTPGRYLLKSMMSGFLLAIVTVFMLAIKTQFAGTNDGLVNLLGAISFSLALVLIVLTNSELLTSNFMYLTVGWYYKVIAVKKMLYIFLFCFIGNIIGGFILFLLMKGTHVMTPEMVASLSKTVHLKTVESTWLNILIKGIFCNFFINIGIYVSMLFKEGLARAFFIAVGVIVFVFMGYEHVVFNAGLYAGMIFYNSDALSWIDVLKNIVFAFVGNYIGGGIFVGLVYAYLNGKRDSIKA . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 15581 16399 . + . GCA_005502385.1_02062_mRNA GCA_005502385.1_02062 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTSNHTTIEDTYTTKDLIKAAVRQVQMKEVMATQTPGRYLLKSMMSGFLLAIVTVFMLAIKTQFAGTNDGLVNLLGAISFSLALVLIVLTNSELLTSNFMYLTVGWYYKVIAVKKMLYIFLFCFIGNIIGGFILFLLMKGTHVMTPEMVASLSKTVHLKTVESTWLNILIKGIFCNFFINIGIYVSMLFKEGLARAFFIAVGVIVFVFMGYEHVVFNAGLYAGMIFYNSDALSWIDVLKNIVFAFVGNYIGGGIFVGLVYAYLNGKRDSIKA . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 15581 16399 . + 0 GCA_005502385.1_02062 GCA_005502385.1_02062_gene,GCA_005502385.1_02062_mRNA GCA_005502385.1_02062 Nitrite transporter NirC GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTSNHTTIEDTYTTKDLIKAAVRQVQMKEVMATQTPGRYLLKSMMSGFLLAIVTVFMLAIKTQFAGTNDGLVNLLGAISFSLALVLIVLTNSELLTSNFMYLTVGWYYKVIAVKKMLYIFLFCFIGNIIGGFILFLLMKGTHVMTPEMVASLSKTVHLKTVESTWLNILIKGIFCNFFINIGIYVSMLFKEGLARAFFIAVGVIVFVFMGYEHVVFNAGLYAGMIFYNSDALSWIDVLKNIVFAFVGNYIGGGIFVGLVYAYLNGKRDSIKA persistent 272 Formate/nitrite transporter family protein WP_002448547.1 UPI00019FCD4D UniRef100_A0A8I1BEV6,UniRef50_Q2G1V0,UniRef90_A0A8I1BEV6 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 16524 17237 . + . GCA_005502385.1_02063_gene GCA_005502385.1_02063 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MVANILVAHGMRKGDQNKALGEFIDSLLQDETYAYELAFIESEEKSVENTITNLIEKGETQFKVVPLLIFSAMHYIVDIPEMLRNIKQAHPNIIYEISAPLGTHPYMVDLVEQRINDVDMNKESDVAVVLIAHGSFSYTKAHDELKEFSTKLKQDKPIYCRTLYGDITFKNDLDQLSRQYRHLIVVPMFLYDGRLVNKVKGLISEMDIANELHMTPSINFDPILKSIIRERLKELTV . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 16524 17237 . + . GCA_005502385.1_02063_mRNA GCA_005502385.1_02063 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MVANILVAHGMRKGDQNKALGEFIDSLLQDETYAYELAFIESEEKSVENTITNLIEKGETQFKVVPLLIFSAMHYIVDIPEMLRNIKQAHPNIIYEISAPLGTHPYMVDLVEQRINDVDMNKESDVAVVLIAHGSFSYTKAHDELKEFSTKLKQDKPIYCRTLYGDITFKNDLDQLSRQYRHLIVVPMFLYDGRLVNKVKGLISEMDIANELHMTPSINFDPILKSIIRERLKELTV . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 16524 17237 . + 0 GCA_005502385.1_02063 GCA_005502385.1_02063_gene,GCA_005502385.1_02063_mRNA GCA_005502385.1_02063 Sirohydrochlorin cobaltochelatase GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MVANILVAHGMRKGDQNKALGEFIDSLLQDETYAYELAFIESEEKSVENTITNLIEKGETQFKVVPLLIFSAMHYIVDIPEMLRNIKQAHPNIIYEISAPLGTHPYMVDLVEQRINDVDMNKESDVAVVLIAHGSFSYTKAHDELKEFSTKLKQDKPIYCRTLYGDITFKNDLDQLSRQYRHLIVVPMFLYDGRLVNKVKGLISEMDIANELHMTPSINFDPILKSIIRERLKELTV persistent 237 cbiX Cobalamin biosynthesis protein CbiX WP_049379318.1 UPI00066AD51D UniRef100_UPI00066AD51D,UniRef50_A0A380FXW0,UniRef90_A0A3S7GZL0 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 17448 19853 . + . GCA_005502385.1_02064_gene GCA_005502385.1_02064 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MAKQKLVMIGNGMAGLRTIEEILERSDSQFDITIIGKEPYPNYNRIMLSNILQKKMTVEETIMNDYDWYKEHHIELIVDDPVEKVDRQSKTVTTSKGITVAYDICIFATGSKAFVLPIPGSELPSVIGWRTIEDTERMIEIAKTKKRAIVIGGGLLGLECARGLMDQGMDVTVLHLAEWLMEMQLDRKAGDMLKADLERQGMHIELQANSKEIIGTDDVEAIKLADGRVIETDLVVMAVGIRPFTEVAREAGLEVNRGIVVNDYLQTSDEHIYAVGECAEHNGKVYGLVAPLYEQGKVLADYLTGKETEGYKGSTTFTSLKVSGCDLYSAGQIVEDETVHGIEIFNSVDNIYKKVYLSDGRVVGAVLYGDTDDGSRFYNMMKKHESLEDYTLVSLLHKGGEESGTSIADMPDDETICGCNGVDKGTIVNAITTNGLTTVDEVTKTTKAGNSCGKCKGQIGEILKCTLGDEFVAAKPTGICACTDLTRDEIVTQIRAKGLKTSKEVRHVLDFKDKNGCPKCRPAINYYLNMVYPHEHQDEKASRFANERYHANIQNDGTFSVIPQMRGGVTDADQLIRLGEVAKKYNVPLVKVTGSQRVGLYGLKKDELPKVWKDLGMRSASAYGKKTRSVKSCVGKEFCRFGTQYTTRLGIRLEKTFEYIDTPHKFKMGVSGCPRSCVESGVKDFGVISVENGYQIYIGGNGGTEVTVGQLLTTVETEDQVVQLCGALMQYYRETGIYAERTAPWLKRLGFDHVKEVLLDEQRQKELFDRIMDAKQALEEEPWEAIVENKEAQKIFEVEKV . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 17448 19853 . + . GCA_005502385.1_02064_mRNA GCA_005502385.1_02064 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MAKQKLVMIGNGMAGLRTIEEILERSDSQFDITIIGKEPYPNYNRIMLSNILQKKMTVEETIMNDYDWYKEHHIELIVDDPVEKVDRQSKTVTTSKGITVAYDICIFATGSKAFVLPIPGSELPSVIGWRTIEDTERMIEIAKTKKRAIVIGGGLLGLECARGLMDQGMDVTVLHLAEWLMEMQLDRKAGDMLKADLERQGMHIELQANSKEIIGTDDVEAIKLADGRVIETDLVVMAVGIRPFTEVAREAGLEVNRGIVVNDYLQTSDEHIYAVGECAEHNGKVYGLVAPLYEQGKVLADYLTGKETEGYKGSTTFTSLKVSGCDLYSAGQIVEDETVHGIEIFNSVDNIYKKVYLSDGRVVGAVLYGDTDDGSRFYNMMKKHESLEDYTLVSLLHKGGEESGTSIADMPDDETICGCNGVDKGTIVNAITTNGLTTVDEVTKTTKAGNSCGKCKGQIGEILKCTLGDEFVAAKPTGICACTDLTRDEIVTQIRAKGLKTSKEVRHVLDFKDKNGCPKCRPAINYYLNMVYPHEHQDEKASRFANERYHANIQNDGTFSVIPQMRGGVTDADQLIRLGEVAKKYNVPLVKVTGSQRVGLYGLKKDELPKVWKDLGMRSASAYGKKTRSVKSCVGKEFCRFGTQYTTRLGIRLEKTFEYIDTPHKFKMGVSGCPRSCVESGVKDFGVISVENGYQIYIGGNGGTEVTVGQLLTTVETEDQVVQLCGALMQYYRETGIYAERTAPWLKRLGFDHVKEVLLDEQRQKELFDRIMDAKQALEEEPWEAIVENKEAQKIFEVEKV . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 17448 19853 . + 0 GCA_005502385.1_02064 GCA_005502385.1_02064_gene,GCA_005502385.1_02064_mRNA GCA_005502385.1_02064 Nitrite reductase [NAD(P)H] GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MAKQKLVMIGNGMAGLRTIEEILERSDSQFDITIIGKEPYPNYNRIMLSNILQKKMTVEETIMNDYDWYKEHHIELIVDDPVEKVDRQSKTVTTSKGITVAYDICIFATGSKAFVLPIPGSELPSVIGWRTIEDTERMIEIAKTKKRAIVIGGGLLGLECARGLMDQGMDVTVLHLAEWLMEMQLDRKAGDMLKADLERQGMHIELQANSKEIIGTDDVEAIKLADGRVIETDLVVMAVGIRPFTEVAREAGLEVNRGIVVNDYLQTSDEHIYAVGECAEHNGKVYGLVAPLYEQGKVLADYLTGKETEGYKGSTTFTSLKVSGCDLYSAGQIVEDETVHGIEIFNSVDNIYKKVYLSDGRVVGAVLYGDTDDGSRFYNMMKKHESLEDYTLVSLLHKGGEESGTSIADMPDDETICGCNGVDKGTIVNAITTNGLTTVDEVTKTTKAGNSCGKCKGQIGEILKCTLGDEFVAAKPTGICACTDLTRDEIVTQIRAKGLKTSKEVRHVLDFKDKNGCPKCRPAINYYLNMVYPHEHQDEKASRFANERYHANIQNDGTFSVIPQMRGGVTDADQLIRLGEVAKKYNVPLVKVTGSQRVGLYGLKKDELPKVWKDLGMRSASAYGKKTRSVKSCVGKEFCRFGTQYTTRLGIRLEKTFEYIDTPHKFKMGVSGCPRSCVESGVKDFGVISVENGYQIYIGGNGGTEVTVGQLLTTVETEDQVVQLCGALMQYYRETGIYAERTAPWLKRLGFDHVKEVLLDEQRQKELFDRIMDAKQALEEEPWEAIVENKEAQKIFEVEKV persistent 801 Nitrite reductase WP_070491918.1 UPI0008A2FB73 UniRef100_UPI0008A2FB73,UniRef50_A0A380G539,UniRef90_A0A3S7GW06 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 19865 20170 . + . GCA_005502385.1_02065_gene GCA_005502385.1_02065 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MEKVKVTTMDELTPLIGKKVIVKDKQIGIFLTENGQVHAINNVCPHKEGPLSEGTVSGEYVYCPLHDQKIDLNTGKVQEPDTGCVETYQVEIEDGDVFICL . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 19865 20170 . + . GCA_005502385.1_02065_mRNA GCA_005502385.1_02065 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MEKVKVTTMDELTPLIGKKVIVKDKQIGIFLTENGQVHAINNVCPHKEGPLSEGTVSGEYVYCPLHDQKIDLNTGKVQEPDTGCVETYQVEIEDGDVFICL . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 19865 20170 . + 0 GCA_005502385.1_02065 GCA_005502385.1_02065_gene,GCA_005502385.1_02065_mRNA GCA_005502385.1_02065 Assimilatory nitrite reductase [NAD(P)H] small subunit GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MEKVKVTTMDELTPLIGKKVIVKDKQIGIFLTENGQVHAINNVCPHKEGPLSEGTVSGEYVYCPLHDQKIDLNTGKVQEPDTGCVETYQVEIEDGDVFICL persistent 101 Nitrite reductase (NAD(P)H) small subunit 1.7.1.4 UniRef50_A0A3A3AHT4,UniRef90_A0A974KXW2 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 20161 21111 . + . GCA_005502385.1_02066_gene GCA_005502385.1_02066 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSLVTKSEFGKVYLIGAGPGNPNLLTKQAERLIRQADVILYDRLVNPLILQYAKPTAEIIDVGKKPYTKHIQQEDINLKIVAAAKKYKVVVRLKGGDPAVFGRVTEEIDILKEHQIAYDIVPGVTSASAAVASLDLGLTMRSVAPSVTFSTGHFKDDIDQDMDIRNLANGGTLAIYMGIKRLNDIINQIRRYTKEDYDIAIIFNATCYNETIVVGKLSTIEYQLSKLNMKHDPGICILGHIINYMDDEKIIHSKQTIDETLYVIKGNKDLALSKAEDLSQQYLKCLIQYDETYHSSQKYLYESIITQHQNIKYIEV . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 20161 21111 . + . GCA_005502385.1_02066_mRNA GCA_005502385.1_02066 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSLVTKSEFGKVYLIGAGPGNPNLLTKQAERLIRQADVILYDRLVNPLILQYAKPTAEIIDVGKKPYTKHIQQEDINLKIVAAAKKYKVVVRLKGGDPAVFGRVTEEIDILKEHQIAYDIVPGVTSASAAVASLDLGLTMRSVAPSVTFSTGHFKDDIDQDMDIRNLANGGTLAIYMGIKRLNDIINQIRRYTKEDYDIAIIFNATCYNETIVVGKLSTIEYQLSKLNMKHDPGICILGHIINYMDDEKIIHSKQTIDETLYVIKGNKDLALSKAEDLSQQYLKCLIQYDETYHSSQKYLYESIITQHQNIKYIEV . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 20161 21111 . + 0 GCA_005502385.1_02066 GCA_005502385.1_02066_gene,GCA_005502385.1_02066_mRNA GCA_005502385.1_02066 Siroheme synthase GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSLVTKSEFGKVYLIGAGPGNPNLLTKQAERLIRQADVILYDRLVNPLILQYAKPTAEIIDVGKKPYTKHIQQEDINLKIVAAAKKYKVVVRLKGGDPAVFGRVTEEIDILKEHQIAYDIVPGVTSASAAVASLDLGLTMRSVAPSVTFSTGHFKDDIDQDMDIRNLANGGTLAIYMGIKRLNDIINQIRRYTKEDYDIAIIFNATCYNETIVVGKLSTIEYQLSKLNMKHDPGICILGHIINYMDDEKIIHSKQTIDETLYVIKGNKDLALSKAEDLSQQYLKCLIQYDETYHSSQKYLYESIITQHQNIKYIEV persistent 316 uroporphyrinogen-III C-methyltransferase WP_048762163.1 UPI000660A913 UniRef100_UPI000660A913,UniRef50_A0A3A5LVF3,UniRef90_A0A3S7GWB1 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 21318 25001 . + . GCA_005502385.1_02067_gene GCA_005502385.1_02067 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MGKFGLNFFKPTETFNGNWSVLESKSREWEKMYRERWSHDKVVRTTHGVNCTGSCSWKVFVKNGVITWENQQIDYPSCGPDMPEFEPRGCPRGASFSWYEYSPLRVKYPYIRGKLLDLWTEALEDNNGNRIAAWASIVEDEKKAKLYKEARGKGGHVRASWKDVTDIIAAQILYTIKKDGPDRIAGFTPIPAMSMISYASGARFINLLGGEMLSFYDWYADLPPASPQIWGEQTDVPESSDWYNASYIIMWGSNVPLTRTPDAHFMTEVRYKGAKVISVAPDYAENVKFADNWLAPNPGTDAAVAQAMTHVILQEFYEDKPSDMFVNYAKQYTDMPFVLMLDEDENGYKAGRFLRASDLGIKSENGEWKPVIHDAISHKLVVPNGTMGQRWEEGKQWNLKLETEDGSKIDPALSVAEEEYELQTIQFPYFDSQGDGIFERPIPTKKVKLADGKEVRIATVYDLMASQYGIKRFGHELEAKSYEDSESKYTPAWQENVTGIKQELVTQVAREFAQNAIDTKGRSMIIMGAGINHWFNSDTIYRAVLNLVLLCGCQGVNGGGWAHYVGQEKCRPIEGWNTVAFAKDWQGPPRLQNGTSWFYFATDQWKYEESNVDKLKSPLANNIKHQHPADYNVTAARLGWLPSYPQFNKNSLLFGEEAKDAGDDSNEAILKRAIESVKNKETEFAIEDPDLRKNHPKTLFVWRSNLISSSAKGQEYFMKHLLGTRSGLMAEPNEDDKPEEIKWREDTVGKLDLLVSLDFRMTATPLYSDIVLPAATWYEKHDLSSTDMHPFIHPFNPAIDPLWESRSDWDIYKTLSKAISEMAKDYLPGTFKDVVTTPLAHDSKQELGSEYGIVKDWSKGEVEGIPGKTMPNFSIVERDYTKIYDKYVTLGPLLEKGKVGAHGVSFSVKEEYEELKSMIGTWNDDDEHSVRNDRPRIDTARKVADAILNISSATNGKLSQKSYEDLENQTGMELKDISKERASEKISFLNITAQPREVIPTAVFPGSNKNNRRYSPFTTNIERLVPFRTLTGRQSYYIDHEVFQQFGESLPVYKPTLPPMVFGARDKKVKGGQDALVLRYLTPHGKWNIHSTYQDNERMLTLFRGGPVVWLSNEDAEQHGINDNDWLEVYNRNGVVTARAVTSHRMPKGTMFMYHAQDKHIETPGSEITDTRGGSHNAPTRIHLKPTQLVGGYAQISYHFNYYGPIGNQRDVYVAVRKMKEVNWLED . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 21318 25001 . + . GCA_005502385.1_02067_mRNA GCA_005502385.1_02067 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MGKFGLNFFKPTETFNGNWSVLESKSREWEKMYRERWSHDKVVRTTHGVNCTGSCSWKVFVKNGVITWENQQIDYPSCGPDMPEFEPRGCPRGASFSWYEYSPLRVKYPYIRGKLLDLWTEALEDNNGNRIAAWASIVEDEKKAKLYKEARGKGGHVRASWKDVTDIIAAQILYTIKKDGPDRIAGFTPIPAMSMISYASGARFINLLGGEMLSFYDWYADLPPASPQIWGEQTDVPESSDWYNASYIIMWGSNVPLTRTPDAHFMTEVRYKGAKVISVAPDYAENVKFADNWLAPNPGTDAAVAQAMTHVILQEFYEDKPSDMFVNYAKQYTDMPFVLMLDEDENGYKAGRFLRASDLGIKSENGEWKPVIHDAISHKLVVPNGTMGQRWEEGKQWNLKLETEDGSKIDPALSVAEEEYELQTIQFPYFDSQGDGIFERPIPTKKVKLADGKEVRIATVYDLMASQYGIKRFGHELEAKSYEDSESKYTPAWQENVTGIKQELVTQVAREFAQNAIDTKGRSMIIMGAGINHWFNSDTIYRAVLNLVLLCGCQGVNGGGWAHYVGQEKCRPIEGWNTVAFAKDWQGPPRLQNGTSWFYFATDQWKYEESNVDKLKSPLANNIKHQHPADYNVTAARLGWLPSYPQFNKNSLLFGEEAKDAGDDSNEAILKRAIESVKNKETEFAIEDPDLRKNHPKTLFVWRSNLISSSAKGQEYFMKHLLGTRSGLMAEPNEDDKPEEIKWREDTVGKLDLLVSLDFRMTATPLYSDIVLPAATWYEKHDLSSTDMHPFIHPFNPAIDPLWESRSDWDIYKTLSKAISEMAKDYLPGTFKDVVTTPLAHDSKQELGSEYGIVKDWSKGEVEGIPGKTMPNFSIVERDYTKIYDKYVTLGPLLEKGKVGAHGVSFSVKEEYEELKSMIGTWNDDDEHSVRNDRPRIDTARKVADAILNISSATNGKLSQKSYEDLENQTGMELKDISKERASEKISFLNITAQPREVIPTAVFPGSNKNNRRYSPFTTNIERLVPFRTLTGRQSYYIDHEVFQQFGESLPVYKPTLPPMVFGARDKKVKGGQDALVLRYLTPHGKWNIHSTYQDNERMLTLFRGGPVVWLSNEDAEQHGINDNDWLEVYNRNGVVTARAVTSHRMPKGTMFMYHAQDKHIETPGSEITDTRGGSHNAPTRIHLKPTQLVGGYAQISYHFNYYGPIGNQRDVYVAVRKMKEVNWLED . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 21318 25001 . + 0 GCA_005502385.1_02067 GCA_005502385.1_02067_gene,GCA_005502385.1_02067_mRNA GCA_005502385.1_02067 Respiratory nitrate reductase 1 alpha chain GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MGKFGLNFFKPTETFNGNWSVLESKSREWEKMYRERWSHDKVVRTTHGVNCTGSCSWKVFVKNGVITWENQQIDYPSCGPDMPEFEPRGCPRGASFSWYEYSPLRVKYPYIRGKLLDLWTEALEDNNGNRIAAWASIVEDEKKAKLYKEARGKGGHVRASWKDVTDIIAAQILYTIKKDGPDRIAGFTPIPAMSMISYASGARFINLLGGEMLSFYDWYADLPPASPQIWGEQTDVPESSDWYNASYIIMWGSNVPLTRTPDAHFMTEVRYKGAKVISVAPDYAENVKFADNWLAPNPGTDAAVAQAMTHVILQEFYEDKPSDMFVNYAKQYTDMPFVLMLDEDENGYKAGRFLRASDLGIKSENGEWKPVIHDAISHKLVVPNGTMGQRWEEGKQWNLKLETEDGSKIDPALSVAEEEYELQTIQFPYFDSQGDGIFERPIPTKKVKLADGKEVRIATVYDLMASQYGIKRFGHELEAKSYEDSESKYTPAWQENVTGIKQELVTQVAREFAQNAIDTKGRSMIIMGAGINHWFNSDTIYRAVLNLVLLCGCQGVNGGGWAHYVGQEKCRPIEGWNTVAFAKDWQGPPRLQNGTSWFYFATDQWKYEESNVDKLKSPLANNIKHQHPADYNVTAARLGWLPSYPQFNKNSLLFGEEAKDAGDDSNEAILKRAIESVKNKETEFAIEDPDLRKNHPKTLFVWRSNLISSSAKGQEYFMKHLLGTRSGLMAEPNEDDKPEEIKWREDTVGKLDLLVSLDFRMTATPLYSDIVLPAATWYEKHDLSSTDMHPFIHPFNPAIDPLWESRSDWDIYKTLSKAISEMAKDYLPGTFKDVVTTPLAHDSKQELGSEYGIVKDWSKGEVEGIPGKTMPNFSIVERDYTKIYDKYVTLGPLLEKGKVGAHGVSFSVKEEYEELKSMIGTWNDDDEHSVRNDRPRIDTARKVADAILNISSATNGKLSQKSYEDLENQTGMELKDISKERASEKISFLNITAQPREVIPTAVFPGSNKNNRRYSPFTTNIERLVPFRTLTGRQSYYIDHEVFQQFGESLPVYKPTLPPMVFGARDKKVKGGQDALVLRYLTPHGKWNIHSTYQDNERMLTLFRGGPVVWLSNEDAEQHGINDNDWLEVYNRNGVVTARAVTSHRMPKGTMFMYHAQDKHIETPGSEITDTRGGSHNAPTRIHLKPTQLVGGYAQISYHFNYYGPIGNQRDVYVAVRKMKEVNWLED persistent 1227 narG nitrate reductase subunit alpha 1.7.5.1,1.7.99.-,1.7.99.4 GO:0008940,GO:0009325,GO:0042126 COG5013,CP WP_137689681.1 UPI0010F5267E UniRef100_UPI0010F5267E,UniRef50_A0A127FDB7,UniRef90_Q5HLK0 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 24991 26550 . + . GCA_005502385.1_02068_gene GCA_005502385.1_02068 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKIKAQVAMVLNLDKCIGCHTCSVTCKNTWTNRPGAEYMWFNNVETKPGVGYPKRWEDQEHYKGGWVLNKKGKLELKSGSKWSKIALGKIFYNPDMPLIKDYYEPWTYNYEHLTTAKEGKHSPVAKAHSLISGDKLNLEWGPNWEDDLAGGHVTGPEDPNIQRIEEDIKFQFDETFMMYLPRLCEHCLNPSCVASCPSGAMYKRDEDGIVLVDQEACRGWRYCMTGCPYKKVYFNWKTNKAEKCTFCFPRIEAGMPTVCSETCTGRMRYLGVLLYDADRVHEAASAENEQDLYEKQLDIFLNPFDEEVIEQAEKDGISYEWIQAAQNSPVYKLAIEYKLAFPLHPEFRTMPMVWYCPPLSPIMSYFEGKNSGQNPDMIFPAIEEMRLPIEYLANLFTAGKVEPVKEALQKMAMMRSYMRAQVTNKPFDTSRLERLGLSEIQTKEMYRLLGLAKYEDRFVVPSSHKETYLDTYHAQGSQGYGGEYFGDNCEGCGVPVGSTSGKSGQEIYNENFYGGIFRD . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 24991 26550 . + . GCA_005502385.1_02068_mRNA GCA_005502385.1_02068 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKIKAQVAMVLNLDKCIGCHTCSVTCKNTWTNRPGAEYMWFNNVETKPGVGYPKRWEDQEHYKGGWVLNKKGKLELKSGSKWSKIALGKIFYNPDMPLIKDYYEPWTYNYEHLTTAKEGKHSPVAKAHSLISGDKLNLEWGPNWEDDLAGGHVTGPEDPNIQRIEEDIKFQFDETFMMYLPRLCEHCLNPSCVASCPSGAMYKRDEDGIVLVDQEACRGWRYCMTGCPYKKVYFNWKTNKAEKCTFCFPRIEAGMPTVCSETCTGRMRYLGVLLYDADRVHEAASAENEQDLYEKQLDIFLNPFDEEVIEQAEKDGISYEWIQAAQNSPVYKLAIEYKLAFPLHPEFRTMPMVWYCPPLSPIMSYFEGKNSGQNPDMIFPAIEEMRLPIEYLANLFTAGKVEPVKEALQKMAMMRSYMRAQVTNKPFDTSRLERLGLSEIQTKEMYRLLGLAKYEDRFVVPSSHKETYLDTYHAQGSQGYGGEYFGDNCEGCGVPVGSTSGKSGQEIYNENFYGGIFRD . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 24991 26550 . + 0 GCA_005502385.1_02068 GCA_005502385.1_02068_gene,GCA_005502385.1_02068_mRNA GCA_005502385.1_02068 Respiratory nitrate reductase 1 beta chain GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKIKAQVAMVLNLDKCIGCHTCSVTCKNTWTNRPGAEYMWFNNVETKPGVGYPKRWEDQEHYKGGWVLNKKGKLELKSGSKWSKIALGKIFYNPDMPLIKDYYEPWTYNYEHLTTAKEGKHSPVAKAHSLISGDKLNLEWGPNWEDDLAGGHVTGPEDPNIQRIEEDIKFQFDETFMMYLPRLCEHCLNPSCVASCPSGAMYKRDEDGIVLVDQEACRGWRYCMTGCPYKKVYFNWKTNKAEKCTFCFPRIEAGMPTVCSETCTGRMRYLGVLLYDADRVHEAASAENEQDLYEKQLDIFLNPFDEEVIEQAEKDGISYEWIQAAQNSPVYKLAIEYKLAFPLHPEFRTMPMVWYCPPLSPIMSYFEGKNSGQNPDMIFPAIEEMRLPIEYLANLFTAGKVEPVKEALQKMAMMRSYMRAQVTNKPFDTSRLERLGLSEIQTKEMYRLLGLAKYEDRFVVPSSHKETYLDTYHAQGSQGYGGEYFGDNCEGCGVPVGSTSGKSGQEIYNENFYGGIFRD persistent 519 narH nitrate reductase subunit beta 1.7.5.1,1.7.99.-,1.7.99.4 GO:0008940,GO:0009325,GO:0042126 COG1140,CP WP_019834828.1 UPI0003807676 UniRef100_UPI0003807676,UniRef50_P11349,UniRef90_Q5HLK1 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 26543 27118 . + . GCA_005502385.1_02069_gene GCA_005502385.1_02069 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MINLTQFKYYQESFGYLAQQLNFPEKLTFHPNTFEETIHPSHPGYSDLMKYREIMYQFTLSEIKAIYTDTFDFNKTSPLYMTYNKFDTQKERGQMLAKLKVLYEMFGLKMVDNELSDYLPLMLQFLHVASWHNDPRAEGNIELVIMIIEDGTYEMANQLAKENNPYAYVIRALRETLKACLDIPKEVTHHA . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 26543 27118 . + . GCA_005502385.1_02069_mRNA GCA_005502385.1_02069 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MINLTQFKYYQESFGYLAQQLNFPEKLTFHPNTFEETIHPSHPGYSDLMKYREIMYQFTLSEIKAIYTDTFDFNKTSPLYMTYNKFDTQKERGQMLAKLKVLYEMFGLKMVDNELSDYLPLMLQFLHVASWHNDPRAEGNIELVIMIIEDGTYEMANQLAKENNPYAYVIRALRETLKACLDIPKEVTHHA . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 26543 27118 . + 0 GCA_005502385.1_02069 GCA_005502385.1_02069_gene,GCA_005502385.1_02069_mRNA GCA_005502385.1_02069 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MINLTQFKYYQESFGYLAQQLNFPEKLTFHPNTFEETIHPSHPGYSDLMKYREIMYQFTLSEIKAIYTDTFDFNKTSPLYMTYNKFDTQKERGQMLAKLKVLYEMFGLKMVDNELSDYLPLMLQFLHVASWHNDPRAEGNIELVIMIIEDGTYEMANQLAKENNPYAYVIRALRETLKACLDIPKEVTHHA persistent 191 narJ nitrate reductase molybdenum cofactor assembly chaperone GO:0051082,GO:0051131 WP_019834829.1 UPI00037C4AC7 UniRef100_UPI00037C4AC7,UniRef50_A0A0D0RML2,UniRef90_A0A6N0I4J7 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 27111 27800 . + . GCA_005502385.1_02070_gene GCA_005502385.1_02070 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MLNQFLWIIYPYLCVAIFIVGHIARYKYDQFSWTAKSSEFLEKKQLKWGSLLFHLGIIPVFFGHVVGLAIPAKWIDGLGISESTYHFGAVYIGSIFGIMTLIGMLLLTARRLTISNVRKLSSASDIFVNFLLILIIFMGCFSTLVTNAMVTDFDYRQTISIWFRHLFTFSPNAALMTGVPLSFKIHILLGFTILACWPFTRLVHVWSIPLAYTNRRYIVYRKHKAPRAH . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 27111 27800 . + . GCA_005502385.1_02070_mRNA GCA_005502385.1_02070 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MLNQFLWIIYPYLCVAIFIVGHIARYKYDQFSWTAKSSEFLEKKQLKWGSLLFHLGIIPVFFGHVVGLAIPAKWIDGLGISESTYHFGAVYIGSIFGIMTLIGMLLLTARRLTISNVRKLSSASDIFVNFLLILIIFMGCFSTLVTNAMVTDFDYRQTISIWFRHLFTFSPNAALMTGVPLSFKIHILLGFTILACWPFTRLVHVWSIPLAYTNRRYIVYRKHKAPRAH . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 27111 27800 . + 0 GCA_005502385.1_02070 GCA_005502385.1_02070_gene,GCA_005502385.1_02070_mRNA GCA_005502385.1_02070 Nitrate reductase-like protein NarX GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MLNQFLWIIYPYLCVAIFIVGHIARYKYDQFSWTAKSSEFLEKKQLKWGSLLFHLGIIPVFFGHVVGLAIPAKWIDGLGISESTYHFGAVYIGSIFGIMTLIGMLLLTARRLTISNVRKLSSASDIFVNFLLILIIFMGCFSTLVTNAMVTDFDYRQTISIWFRHLFTFSPNAALMTGVPLSFKIHILLGFTILACWPFTRLVHVWSIPLAYTNRRYIVYRKHKAPRAH persistent 229 narI respiratory nitrate reductase subunit gamma 1.7.99.4 GO:0008940,GO:0009325,GO:0019645 COG2181,CP WP_017174958.1 UPI0002D3F0BD UniRef100_A0A3S7GZZ6,UniRef50_A0AA43RY11,UniRef90_A0A3S7GZZ6 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 27821 28273 . + . GCA_005502385.1_02071_gene GCA_005502385.1_02071 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIPEPLFEPVHFQQELDTLRKKVNCDFAAVALYENHEPSGPIKWQYVSGNLNSRYKLIVLRKGRGLAGTVMKTGKRMVIENVSKTITPEEKIKYPILMSENLNALVAIPLWHEQHVAGVLLLGQRGNKTLPTVINQLNIKGRLWEFNEEI . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 27821 28273 . + . GCA_005502385.1_02071_mRNA GCA_005502385.1_02071 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIPEPLFEPVHFQQELDTLRKKVNCDFAAVALYENHEPSGPIKWQYVSGNLNSRYKLIVLRKGRGLAGTVMKTGKRMVIENVSKTITPEEKIKYPILMSENLNALVAIPLWHEQHVAGVLLLGQRGNKTLPTVINQLNIKGRLWEFNEEI . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 27821 28273 . + 0 GCA_005502385.1_02071 GCA_005502385.1_02071_gene,GCA_005502385.1_02071_mRNA GCA_005502385.1_02071 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIPEPLFEPVHFQQELDTLRKKVNCDFAAVALYENHEPSGPIKWQYVSGNLNSRYKLIVLRKGRGLAGTVMKTGKRMVIENVSKTITPEEKIKYPILMSENLNALVAIPLWHEQHVAGVLLLGQRGNKTLPTVINQLNIKGRLWEFNEEI persistent 150 nreA nitrate respiration regulation accessory nitrate sensor NreA WP_137689682.1 UPI0010F7D903 UniRef100_UPI0010F7D903,UniRef50_Q2FVM5,UniRef90_A0A974QNQ9 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 28283 29317 . + . GCA_005502385.1_02072_gene GCA_005502385.1_02072 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MLELYNLQMEDLLKKYYETTNEKIVFVNKEGKVIAMNDAAEEIISKDNNYSAMTNAICDRCEGYSNEFELQSCKNCYLDTSKPNDINFQVFMKTVDHKVRPFTASYQAIDEDNEIYAFTLQDISPQIERQEKMYQRQMMRKTIFAQENERKRISRELHDSVVQEMLNIDVELRLLKYQKESSELVQQSQRIEGLMSKLIDDIRHLSVELRPSSLDDLGLEAAFKSYFKQFENNYGMQIVYQSNIKDKRYDSEVETVVYRVVQEAVFNALKYAGVSSIDVFVQEVGRLLIAEVIDHGQGFDPNSQPQGTGLGLYGMNERAELVNGKVNVETHLGKGTIITLEVPL . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 28283 29317 . + . GCA_005502385.1_02072_mRNA GCA_005502385.1_02072 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MLELYNLQMEDLLKKYYETTNEKIVFVNKEGKVIAMNDAAEEIISKDNNYSAMTNAICDRCEGYSNEFELQSCKNCYLDTSKPNDINFQVFMKTVDHKVRPFTASYQAIDEDNEIYAFTLQDISPQIERQEKMYQRQMMRKTIFAQENERKRISRELHDSVVQEMLNIDVELRLLKYQKESSELVQQSQRIEGLMSKLIDDIRHLSVELRPSSLDDLGLEAAFKSYFKQFENNYGMQIVYQSNIKDKRYDSEVETVVYRVVQEAVFNALKYAGVSSIDVFVQEVGRLLIAEVIDHGQGFDPNSQPQGTGLGLYGMNERAELVNGKVNVETHLGKGTIITLEVPL . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 28283 29317 . + 0 GCA_005502385.1_02072 GCA_005502385.1_02072_gene,GCA_005502385.1_02072_mRNA GCA_005502385.1_02072 Oxygen sensor histidine kinase NreB GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MLELYNLQMEDLLKKYYETTNEKIVFVNKEGKVIAMNDAAEEIISKDNNYSAMTNAICDRCEGYSNEFELQSCKNCYLDTSKPNDINFQVFMKTVDHKVRPFTASYQAIDEDNEIYAFTLQDISPQIERQEKMYQRQMMRKTIFAQENERKRISRELHDSVVQEMLNIDVELRLLKYQKESSELVQQSQRIEGLMSKLIDDIRHLSVELRPSSLDDLGLEAAFKSYFKQFENNYGMQIVYQSNIKDKRYDSEVETVVYRVVQEAVFNALKYAGVSSIDVFVQEVGRLLIAEVIDHGQGFDPNSQPQGTGLGLYGMNERAELVNGKVNVETHLGKGTIITLEVPL persistent 344 nreB nitrate respiration regulation sensor histidine kinase NreB 2.7.13.3 UPI0010F9C7A7 UniRef100_UPI0010F9C7A7,UniRef50_Q7WZY5,UniRef90_A0A3S7GW21 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 29343 29996 . + . GCA_005502385.1_02073_gene GCA_005502385.1_02073 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKIVIADDHAVVRTGFSMILNFQEDMEVVATAADGVEAYQKVMEYKPDVLIMDLSMPPGESGLIATSKISESFPETKILILTMYDDEEYLFHVLRNGAKGYILKNSPDEQLILAVRTVYKGETYIDMKLTTSLVNEFVNVSNQDEKATNDPFKILSKRELEILPLIAKGYGNKEIAEKLFVSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKLLDF . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 29343 29996 . + . GCA_005502385.1_02073_mRNA GCA_005502385.1_02073 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKIVIADDHAVVRTGFSMILNFQEDMEVVATAADGVEAYQKVMEYKPDVLIMDLSMPPGESGLIATSKISESFPETKILILTMYDDEEYLFHVLRNGAKGYILKNSPDEQLILAVRTVYKGETYIDMKLTTSLVNEFVNVSNQDEKATNDPFKILSKRELEILPLIAKGYGNKEIAEKLFVSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKLLDF . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 29343 29996 . + 0 GCA_005502385.1_02073 GCA_005502385.1_02073_gene,GCA_005502385.1_02073_mRNA GCA_005502385.1_02073 Oxygen regulatory protein NreC GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKIVIADDHAVVRTGFSMILNFQEDMEVVATAADGVEAYQKVMEYKPDVLIMDLSMPPGESGLIATSKISESFPETKILILTMYDDEEYLFHVLRNGAKGYILKNSPDEQLILAVRTVYKGETYIDMKLTTSLVNEFVNVSNQDEKATNDPFKILSKRELEILPLIAKGYGNKEIAEKLFVSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKLLDF persistent 217 nreC nitrate respiration regulation response regulator NreC GO:0000160,GO:0003677,GO:0005737,GO:0006355 COG2197,TK WP_002448626.1 UPI00019FCD58 UniRef100_A0A1L8Y755,UniRef50_Q7WZY4,UniRef90_Q2FVM7 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 30253 31410 . + . GCA_005502385.1_02074_gene GCA_005502385.1_02074 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNKTKGGFQLTLQTLSLVVGFMAWSIISPLMPYISQDIKINPGQLSIILAIPVILGSILRVPFGYLTNIIGAKWVFFCSFIILLFPIFFLGQAQSPSMLMASGFFLGVGGAIFSVGVTSVPKYFSKDKVGLANGIYGMGNIGTAISSFLAPPIAGIVGWQTTVRSYLIIIAIFAILMFFLGDAKEPKVKVPLGAQVKDLSSNYKLYYLSLWYFITFGAFVAFGLFLPNYLVNNFGIDKVDAGIRSGVFIALATFLRPVGGILGDKFNAVKVLMIDFVVMIIGAVILGISSHIALFTIGCLTISICAGLGNGLIFKLVPSYFAKESGTANGIVSMMGGLGGFFPPLVITYVTSLTGSSHLAFILLAVFGILAFITMGHLYKKEYAK . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 30253 31410 . + . GCA_005502385.1_02074_mRNA GCA_005502385.1_02074 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNKTKGGFQLTLQTLSLVVGFMAWSIISPLMPYISQDIKINPGQLSIILAIPVILGSILRVPFGYLTNIIGAKWVFFCSFIILLFPIFFLGQAQSPSMLMASGFFLGVGGAIFSVGVTSVPKYFSKDKVGLANGIYGMGNIGTAISSFLAPPIAGIVGWQTTVRSYLIIIAIFAILMFFLGDAKEPKVKVPLGAQVKDLSSNYKLYYLSLWYFITFGAFVAFGLFLPNYLVNNFGIDKVDAGIRSGVFIALATFLRPVGGILGDKFNAVKVLMIDFVVMIIGAVILGISSHIALFTIGCLTISICAGLGNGLIFKLVPSYFAKESGTANGIVSMMGGLGGFFPPLVITYVTSLTGSSHLAFILLAVFGILAFITMGHLYKKEYAK . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 30253 31410 . + 0 GCA_005502385.1_02074 GCA_005502385.1_02074_gene,GCA_005502385.1_02074_mRNA GCA_005502385.1_02074 putative nitrate transporter NarT GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNKTKGGFQLTLQTLSLVVGFMAWSIISPLMPYISQDIKINPGQLSIILAIPVILGSILRVPFGYLTNIIGAKWVFFCSFIILLFPIFFLGQAQSPSMLMASGFFLGVGGAIFSVGVTSVPKYFSKDKVGLANGIYGMGNIGTAISSFLAPPIAGIVGWQTTVRSYLIIIAIFAILMFFLGDAKEPKVKVPLGAQVKDLSSNYKLYYLSLWYFITFGAFVAFGLFLPNYLVNNFGIDKVDAGIRSGVFIALATFLRPVGGILGDKFNAVKVLMIDFVVMIIGAVILGISSHIALFTIGCLTISICAGLGNGLIFKLVPSYFAKESGTANGIVSMMGGLGGFFPPLVITYVTSLTGSSHLAFILLAVFGILAFITMGHLYKKEYAK persistent 385 narT putative nitrate transporter NarT WP_017174955.1 UPI0002F11150 UniRef100_A0A3S7GW18,UniRef50_Q2FVN1,UniRef90_A0A3S7GW18 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 31675 32091 . - . GCA_005502385.1_02075_gene GCA_005502385.1_02075 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNNREFFDQAIFKNNPRDVFRDLGEQVFNQFSTKSFPTNVYSQKNQYVLEAELPGVKKQDIHLKYEHATLTIKVIKQVSEQTGSVQLSERSSGELVRRFEFEDINKDQIKASYEDGVLVVILPKKINEEDEGTTITVE . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 31675 32091 . - . GCA_005502385.1_02075_mRNA GCA_005502385.1_02075 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNNREFFDQAIFKNNPRDVFRDLGEQVFNQFSTKSFPTNVYSQKNQYVLEAELPGVKKQDIHLKYEHATLTIKVIKQVSEQTGSVQLSERSSGELVRRFEFEDINKDQIKASYEDGVLVVILPKKINEEDEGTTITVE . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 31675 32091 . - 0 GCA_005502385.1_02075 GCA_005502385.1_02075_gene,GCA_005502385.1_02075_mRNA GCA_005502385.1_02075 Acid shock protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNNREFFDQAIFKNNPRDVFRDLGEQVFNQFSTKSFPTNVYSQKNQYVLEAELPGVKKQDIHLKYEHATLTIKVIKQVSEQTGSVQLSERSSGELVRRFEFEDINKDQIKASYEDGVLVVILPKKINEEDEGTTITVE persistent 138 Heat-shock protein Hsp20 WP_049382388.1 UPI00066E2429 UniRef100_A0A8I0WB10,UniRef50_A0A7X9WBX3,UniRef90_A0A8X8KJY4 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 32325 32768 . - . GCA_005502385.1_02076_gene GCA_005502385.1_02076 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MYVKDSYLSKQLCFLLYVTSKEVIKKYTHYLKEYDLTYTSFMVLMAIENDEKINIKSLGQRVFLDSGTLTPLLKKLEKKGYVQRMREKEDERNLQISLTQNGRDIKPVLEQISNQVFNDFDISDDEADGLASSLRHIISENFGSKAE . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 32325 32768 . - . GCA_005502385.1_02076_mRNA GCA_005502385.1_02076 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MYVKDSYLSKQLCFLLYVTSKEVIKKYTHYLKEYDLTYTSFMVLMAIENDEKINIKSLGQRVFLDSGTLTPLLKKLEKKGYVQRMREKEDERNLQISLTQNGRDIKPVLEQISNQVFNDFDISDDEADGLASSLRHIISENFGSKAE . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 32325 32768 . - 0 GCA_005502385.1_02076 GCA_005502385.1_02076_gene,GCA_005502385.1_02076_mRNA GCA_005502385.1_02076 HTH-type transcriptional regulator SarZ GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MYVKDSYLSKQLCFLLYVTSKEVIKKYTHYLKEYDLTYTSFMVLMAIENDEKINIKSLGQRVFLDSGTLTPLLKKLEKKGYVQRMREKEDERNLQISLTQNGRDIKPVLEQISNQVFNDFDISDDEADGLASSLRHIISENFGSKAE persistent 147 sarZ HTH-type transcriptional regulator SarZ WP_049382387.1 UPI00066EC2DB UniRef100_A0A4Q9WNY6,UniRef50_Q2FVN3,UniRef90_A0A8X8KI21 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 33050 33409 . + . GCA_005502385.1_02077_gene GCA_005502385.1_02077 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSKKQKIIRIIIILAISLVVAIAFFFGTKAYQGHKNVQLVDNYIEQKHLKDKIKSEKTLYSAKRGVYYKQVVFKDEPNLTYIIQPIGTRKGILVEGFDTETKKSIKGAKHNYFNQNYKP . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 33050 33409 . + . GCA_005502385.1_02077_mRNA GCA_005502385.1_02077 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSKKQKIIRIIIILAISLVVAIAFFFGTKAYQGHKNVQLVDNYIEQKHLKDKIKSEKTLYSAKRGVYYKQVVFKDEPNLTYIIQPIGTRKGILVEGFDTETKKSIKGAKHNYFNQNYKP . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 33050 33409 . + 0 GCA_005502385.1_02077 GCA_005502385.1_02077_gene,GCA_005502385.1_02077_mRNA GCA_005502385.1_02077 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSKKQKIIRIIIILAISLVVAIAFFFGTKAYQGHKNVQLVDNYIEQKHLKDKIKSEKTLYSAKRGVYYKQVVFKDEPNLTYIIQPIGTRKGILVEGFDTETKKSIKGAKHNYFNQNYKP persistent 119 DUF3139 domain-containing protein WP_049382386.1 UPI00066A2993 UniRef100_A0A8I0WAC8,UniRef50_Q2FVN4,UniRef90_A0AAE5JNQ6 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 33776 35053 . + . GCA_005502385.1_02078_gene GCA_005502385.1_02078 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTLFKRKVSLPMQVLIALVLGVVIGLLLFGQTGVANYIKPFGDVFLNLIKMIIIPIVFCSLALSISNLGDSKKIGSYGWKSILYFEIITTIAIGLGLIIGNIFKPGIGLDPDKLPKGDITKYQSTASAAEQSTYGNHFIDTIVNIIPTNIFEALTKGELLPIIFFAVFFGLGLAAIGEKAEPVKGFLNGTLEAVFWMINKILKLAPIGVFAFICTTVMTFGASALIPLAKLVLVVVFAMIFFIIVVLGIVARICGISIFSIIKILKDELLLAFSTSSSEAVLPVMMNKMEKFGSPKEVTSFVIPIGYSFNLDGSALYQSIAALFVAQMYGIHLSLSEQIILMVTLMVASKGMAGVPGVSIVVLLTTLGAMGLPAQGLALIIGVDRLLDMVRTCVNVIGNALSTVVISKWEHVYDKEKGKKYLESI . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 33776 35053 . + . GCA_005502385.1_02078_mRNA GCA_005502385.1_02078 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTLFKRKVSLPMQVLIALVLGVVIGLLLFGQTGVANYIKPFGDVFLNLIKMIIIPIVFCSLALSISNLGDSKKIGSYGWKSILYFEIITTIAIGLGLIIGNIFKPGIGLDPDKLPKGDITKYQSTASAAEQSTYGNHFIDTIVNIIPTNIFEALTKGELLPIIFFAVFFGLGLAAIGEKAEPVKGFLNGTLEAVFWMINKILKLAPIGVFAFICTTVMTFGASALIPLAKLVLVVVFAMIFFIIVVLGIVARICGISIFSIIKILKDELLLAFSTSSSEAVLPVMMNKMEKFGSPKEVTSFVIPIGYSFNLDGSALYQSIAALFVAQMYGIHLSLSEQIILMVTLMVASKGMAGVPGVSIVVLLTTLGAMGLPAQGLALIIGVDRLLDMVRTCVNVIGNALSTVVISKWEHVYDKEKGKKYLESI . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 33776 35053 . + 0 GCA_005502385.1_02078 GCA_005502385.1_02078_gene,GCA_005502385.1_02078_mRNA GCA_005502385.1_02078 Proton/sodium-glutamate symport protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTLFKRKVSLPMQVLIALVLGVVIGLLLFGQTGVANYIKPFGDVFLNLIKMIIIPIVFCSLALSISNLGDSKKIGSYGWKSILYFEIITTIAIGLGLIIGNIFKPGIGLDPDKLPKGDITKYQSTASAAEQSTYGNHFIDTIVNIIPTNIFEALTKGELLPIIFFAVFFGLGLAAIGEKAEPVKGFLNGTLEAVFWMINKILKLAPIGVFAFICTTVMTFGASALIPLAKLVLVVVFAMIFFIIVVLGIVARICGISIFSIIKILKDELLLAFSTSSSEAVLPVMMNKMEKFGSPKEVTSFVIPIGYSFNLDGSALYQSIAALFVAQMYGIHLSLSEQIILMVTLMVASKGMAGVPGVSIVVLLTTLGAMGLPAQGLALIIGVDRLLDMVRTCVNVIGNALSTVVISKWEHVYDKEKGKKYLESI persistent 425 gltP Proton/sodium-glutamate symport protein GltT C,COG1301 WP_017174953.1 UPI00036D6CAD UniRef100_A0A3S7GWH9,UniRef50_P24943,UniRef90_A0A640MXP1 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 35181 35534 . - . GCA_005502385.1_02079_gene GCA_005502385.1_02079 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKNKKGLGLGIFLIAIMLIVSIILVIVMLNGQQKESYYGYMKDSHTIDKMVNEQTEKVEKNVKLPSNTNIKVKKGDFVFLVKEKGSDSFSRVSKVNHDEVPHGLMMKIHEMHDMKGM . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 35181 35534 . - . GCA_005502385.1_02079_mRNA GCA_005502385.1_02079 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKNKKGLGLGIFLIAIMLIVSIILVIVMLNGQQKESYYGYMKDSHTIDKMVNEQTEKVEKNVKLPSNTNIKVKKGDFVFLVKEKGSDSFSRVSKVNHDEVPHGLMMKIHEMHDMKGM . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 35181 35534 . - 0 GCA_005502385.1_02079 GCA_005502385.1_02079_gene,GCA_005502385.1_02079_mRNA GCA_005502385.1_02079 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKNKKGLGLGIFLIAIMLIVSIILVIVMLNGQQKESYYGYMKDSHTIDKMVNEQTEKVEKNVKLPSNTNIKVKKGDFVFLVKEKGSDSFSRVSKVNHDEVPHGLMMKIHEMHDMKGM persistent 117 DUF4889 domain-containing protein UniRef50_Q2FVN6,UniRef90_UPI00066A68F0 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 35710 36132 . - . GCA_005502385.1_02080_gene GCA_005502385.1_02080 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MDKQKVTQAIEKVLNTSKIGVLSTAYNNKPNSRYMVFYNDGLNLYTKTSNESSKVKEIQSNPEAYILLGYNETTNNSFVEIEASIDIVEDQKVIDWLWETQDKTFFDSKEDSNLCVLKINPKTITLMNDDDIDTPITIDL . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 35710 36132 . - . GCA_005502385.1_02080_mRNA GCA_005502385.1_02080 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MDKQKVTQAIEKVLNTSKIGVLSTAYNNKPNSRYMVFYNDGLNLYTKTSNESSKVKEIQSNPEAYILLGYNETTNNSFVEIEASIDIVEDQKVIDWLWETQDKTFFDSKEDSNLCVLKINPKTITLMNDDDIDTPITIDL . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 35710 36132 . - 0 GCA_005502385.1_02080 GCA_005502385.1_02080_gene,GCA_005502385.1_02080_mRNA GCA_005502385.1_02080 General stress protein 26 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MDKQKVTQAIEKVLNTSKIGVLSTAYNNKPNSRYMVFYNDGLNLYTKTSNESSKVKEIQSNPEAYILLGYNETTNNSFVEIEASIDIVEDQKVIDWLWETQDKTFFDSKEDSNLCVLKINPKTITLMNDDDIDTPITIDL persistent 140 General stress protein WP_002488735.1 UPI00024E1664 UniRef100_A0A4Q9WY15,UniRef50_Q2FVN7,UniRef90_A0A3S7H000 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 36177 38282 . - . GCA_005502385.1_02081_gene GCA_005502385.1_02081 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSSTLFLHENITSMPRRNINHVLILFSLTNELEMTINGKYHPLSNHIAIINQGDLYQINKGRNLIELKIPMAYFYLEDSAFFNCHFDAHLLQSSHFIKSIILNNIEHMYNTSHHDDKVIPKIIQTFYKEAVIRHPHIYIPKIPVEQHILINILTFIHDHITSNISLQDIAAHVLISESYCSNLFVRILNINFKDYYTSLKINHAIRLLICTNDSITSISEQSGFSSHTNFTNQFKNYLNLSPKQFRSQLNHSDPISAIRLKSDIEPKHFELISQFETTEQLSTETTIIDLEQLEAFQHTQSSKAFIHFKNINELFQFVFNDHYDIDLSYLPKPAILINDMSDMNQHSINGNLLNRCFEKLFEKNISLAVIIKNKSEFTTFYDLIMTFLENNQDYKWNKKSVRFMLVFDTKSMTIQDIHLSYLKLRNKNRSIKYGVLVEGLLHQYEKLQEVYDTMKRLNFDYYFVDIENIDTKNILIEYQRGFTHANTHFENYVHFIKNSNIPSTQFVYSSLSLRCFKYTNDGRHPLQLADLVCHLTALLKYGGGICYHLFEDDPMFIALFNRHGSLLPIMHLYQFIAAFIDVPIHISNNYLMSQKDGNYHFILFNKINDRYLSDSKQHYQILNKLNENSLIIANTLNKEHGTIHQLMSQDNLPVYIEKSIIHQLDRCNQPKTELFIQEETNHPFNITLHHDEVKYIYIKSV . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 36177 38282 . - . GCA_005502385.1_02081_mRNA GCA_005502385.1_02081 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSSTLFLHENITSMPRRNINHVLILFSLTNELEMTINGKYHPLSNHIAIINQGDLYQINKGRNLIELKIPMAYFYLEDSAFFNCHFDAHLLQSSHFIKSIILNNIEHMYNTSHHDDKVIPKIIQTFYKEAVIRHPHIYIPKIPVEQHILINILTFIHDHITSNISLQDIAAHVLISESYCSNLFVRILNINFKDYYTSLKINHAIRLLICTNDSITSISEQSGFSSHTNFTNQFKNYLNLSPKQFRSQLNHSDPISAIRLKSDIEPKHFELISQFETTEQLSTETTIIDLEQLEAFQHTQSSKAFIHFKNINELFQFVFNDHYDIDLSYLPKPAILINDMSDMNQHSINGNLLNRCFEKLFEKNISLAVIIKNKSEFTTFYDLIMTFLENNQDYKWNKKSVRFMLVFDTKSMTIQDIHLSYLKLRNKNRSIKYGVLVEGLLHQYEKLQEVYDTMKRLNFDYYFVDIENIDTKNILIEYQRGFTHANTHFENYVHFIKNSNIPSTQFVYSSLSLRCFKYTNDGRHPLQLADLVCHLTALLKYGGGICYHLFEDDPMFIALFNRHGSLLPIMHLYQFIAAFIDVPIHISNNYLMSQKDGNYHFILFNKINDRYLSDSKQHYQILNKLNENSLIIANTLNKEHGTIHQLMSQDNLPVYIEKSIIHQLDRCNQPKTELFIQEETNHPFNITLHHDEVKYIYIKSV . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 36177 38282 . - 0 GCA_005502385.1_02081 GCA_005502385.1_02081_gene,GCA_005502385.1_02081_mRNA GCA_005502385.1_02081 hypothetical protein """""" GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSSTLFLHENITSMPRRNINHVLILFSLTNELEMTINGKYHPLSNHIAIINQGDLYQINKGRNLIELKIPMAYFYLEDSAFFNCHFDAHLLQSSHFIKSIILNNIEHMYNTSHHDDKVIPKIIQTFYKEAVIRHPHIYIPKIPVEQHILINILTFIHDHITSNISLQDIAAHVLISESYCSNLFVRILNINFKDYYTSLKINHAIRLLICTNDSITSISEQSGFSSHTNFTNQFKNYLNLSPKQFRSQLNHSDPISAIRLKSDIEPKHFELISQFETTEQLSTETTIIDLEQLEAFQHTQSSKAFIHFKNINELFQFVFNDHYDIDLSYLPKPAILINDMSDMNQHSINGNLLNRCFEKLFEKNISLAVIIKNKSEFTTFYDLIMTFLENNQDYKWNKKSVRFMLVFDTKSMTIQDIHLSYLKLRNKNRSIKYGVLVEGLLHQYEKLQEVYDTMKRLNFDYYFVDIENIDTKNILIEYQRGFTHANTHFENYVHFIKNSNIPSTQFVYSSLSLRCFKYTNDGRHPLQLADLVCHLTALLKYGGGICYHLFEDDPMFIALFNRHGSLLPIMHLYQFIAAFIDVPIHISNNYLMSQKDGNYHFILFNKINDRYLSDSKQHYQILNKLNENSLIIANTLNKEHGTIHQLMSQDNLPVYIEKSIIHQLDRCNQPKTELFIQEETNHPFNITLHHDEVKYIYIKSV persistent 701 rsp AraC family transcriptional regulator Rsp GO:0003700,GO:0006355,GO:0043565 WP_049379325.1 UPI00066CEE35 UniRef100_UPI00066CEE35,UniRef50_A0A0U1MT29,UniRef90_A0A3S7GVW6 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 39196 40137 . - . GCA_005502385.1_02082_gene GCA_005502385.1_02082 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MLTAYKHSTTNEIVETNINQSASWINVVEPDREEIEQLIEQYNLPEDFIRDPLDADESARIEYDEDTGYSLIIVDLPIVSSTNRHVLSFVTIPLGIVIGNGVIFTICDAENEFLENYSRQDNVNLKFHSRFALDILLTISNHYNRNLRLLNKSRIRIERDLKNSITNKQLYRLMEVEKSLVYFLAALKGNDTIIKKLFRLPAIKRFEEDEDLLEDLVIENNQAIETTELYTGILESITSSYSSLLSNEMNNIMKTLTLFTVLLTLPTLVFSFFGMNVPLPIDDKSYVSWLVIVGISLILVTIVSIFLWRKQKL . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 39196 40137 . - . GCA_005502385.1_02082_mRNA GCA_005502385.1_02082 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MLTAYKHSTTNEIVETNINQSASWINVVEPDREEIEQLIEQYNLPEDFIRDPLDADESARIEYDEDTGYSLIIVDLPIVSSTNRHVLSFVTIPLGIVIGNGVIFTICDAENEFLENYSRQDNVNLKFHSRFALDILLTISNHYNRNLRLLNKSRIRIERDLKNSITNKQLYRLMEVEKSLVYFLAALKGNDTIIKKLFRLPAIKRFEEDEDLLEDLVIENNQAIETTELYTGILESITSSYSSLLSNEMNNIMKTLTLFTVLLTLPTLVFSFFGMNVPLPIDDKSYVSWLVIVGISLILVTIVSIFLWRKQKL . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 39196 40137 . - 0 GCA_005502385.1_02082 GCA_005502385.1_02082_gene,GCA_005502385.1_02082_mRNA GCA_005502385.1_02082 hypothetical protein """""" GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MLTAYKHSTTNEIVETNINQSASWINVVEPDREEIEQLIEQYNLPEDFIRDPLDADESARIEYDEDTGYSLIIVDLPIVSSTNRHVLSFVTIPLGIVIGNGVIFTICDAENEFLENYSRQDNVNLKFHSRFALDILLTISNHYNRNLRLLNKSRIRIERDLKNSITNKQLYRLMEVEKSLVYFLAALKGNDTIIKKLFRLPAIKRFEEDEDLLEDLVIENNQAIETTELYTGILESITSSYSSLLSNEMNNIMKTLTLFTVLLTLPTLVFSFFGMNVPLPIDDKSYVSWLVIVGISLILVTIVSIFLWRKQKL persistent 313 corA Magnesium transporter CorA family protein COG0598,P WP_002454917.1 UPI0001EF5333 UniRef100_A0A6N0I236,UniRef50_Q2FVP2,UniRef90_A0A1L8Y777 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 40162 40785 . - . GCA_005502385.1_02083_gene GCA_005502385.1_02083 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKEDRRVRKTRSAIKSSFIELLNEKELEKITIQDIADRADINRGTFYLHYEDKYLLLSDMEDEFISQMTFLNHLHNIMGKDPEDTAKNFINIILKNMLQHISDNITFYQTILQLNRKSKLEEKIYSLIGENMQKYISTNHEIEGIPEKYFHSYVAGATISTVKFWVNDPQRLSVEDLTNHIFKIIYHGPLRIMVQHQYKTLNIDTAK . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 40162 40785 . - . GCA_005502385.1_02083_mRNA GCA_005502385.1_02083 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKEDRRVRKTRSAIKSSFIELLNEKELEKITIQDIADRADINRGTFYLHYEDKYLLLSDMEDEFISQMTFLNHLHNIMGKDPEDTAKNFINIILKNMLQHISDNITFYQTILQLNRKSKLEEKIYSLIGENMQKYISTNHEIEGIPEKYFHSYVAGATISTVKFWVNDPQRLSVEDLTNHIFKIIYHGPLRIMVQHQYKTLNIDTAK . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 40162 40785 . - 0 GCA_005502385.1_02083 GCA_005502385.1_02083_gene,GCA_005502385.1_02083_mRNA GCA_005502385.1_02083 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKEDRRVRKTRSAIKSSFIELLNEKELEKITIQDIADRADINRGTFYLHYEDKYLLLSDMEDEFISQMTFLNHLHNIMGKDPEDTAKNFINIILKNMLQHISDNITFYQTILQLNRKSKLEEKIYSLIGENMQKYISTNHEIEGIPEKYFHSYVAGATISTVKFWVNDPQRLSVEDLTNHIFKIIYHGPLRIMVQHQYKTLNIDTAK persistent 207 TetR/AcrR family transcriptional regulator WP_049432532.1 UPI00066E48AE UniRef100_A0A974KZC1,UniRef50_Q2FVP3,UniRef90_A0A974KZC1 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 41011 41295 . + . GCA_005502385.1_02084_gene GCA_005502385.1_02084 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIFSLAFYPAFNPKQIPIAVVNNDKGLDIQGNKVNISKTIEDKLIDSDSDSVKWIKVDKESDIKKGINDHEYYGAAIFNKHFSKNAMSKTQLII . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 41011 41295 . + . GCA_005502385.1_02084_mRNA GCA_005502385.1_02084 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIFSLAFYPAFNPKQIPIAVVNNDKGLDIQGNKVNISKTIEDKLIDSDSDSVKWIKVDKESDIKKGINDHEYYGAAIFNKHFSKNAMSKTQLII . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 41011 41295 . + 0 GCA_005502385.1_02084 GCA_005502385.1_02084_gene,GCA_005502385.1_02084_mRNA GCA_005502385.1_02084 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIFSLAFYPAFNPKQIPIAVVNNDKGLDIQGNKVNISKTIEDKLIDSDSDSVKWIKVDKESDIKKGINDHEYYGAAIFNKHFSKNAMSKTQLII persistent 94 ABC-2 type transporter transmembrane domain-containing protein UniRef50_A0A974KZ54 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 41714 42961 . + . GCA_005502385.1_02085_gene GCA_005502385.1_02085 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MVILKRSSKVAIALLMMFLFLFVPSMTKIASAHATLEKTTPAQNGIVSKQPDTIELTFNEPVNAEYSGITIYNDKGKKVADVKPSTIGHSDTLSFSGNQLKEGTQQIKWHTVSADGHEISDQFEFSVGKKTANGVDTTPVAYETPAFWFGVFRYIAEGATIILVGLYWLNGIARRNNLSTFDIFPRHVAVSLIMMMAYIMSLVLYLMTLSSDILDSVLTFNPSVLIQFPYILSAVALIILSGLFVLRNMERTWYWAISIIMILALSMSGHAWSQSAPVWSIILRTLHLAGISLWIGALIYLFSSVFTKKRDAVDLLREILFKVNGAAVAVIIITGILMSIDETKILSIWSNMQTWTILLIIKIVGTLMMMALGFMQTTRALNKRYRINKVSLIVEVSIGIILILVGVIMSQINIP . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 41714 42961 . + . GCA_005502385.1_02085_mRNA GCA_005502385.1_02085 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MVILKRSSKVAIALLMMFLFLFVPSMTKIASAHATLEKTTPAQNGIVSKQPDTIELTFNEPVNAEYSGITIYNDKGKKVADVKPSTIGHSDTLSFSGNQLKEGTQQIKWHTVSADGHEISDQFEFSVGKKTANGVDTTPVAYETPAFWFGVFRYIAEGATIILVGLYWLNGIARRNNLSTFDIFPRHVAVSLIMMMAYIMSLVLYLMTLSSDILDSVLTFNPSVLIQFPYILSAVALIILSGLFVLRNMERTWYWAISIIMILALSMSGHAWSQSAPVWSIILRTLHLAGISLWIGALIYLFSSVFTKKRDAVDLLREILFKVNGAAVAVIIITGILMSIDETKILSIWSNMQTWTILLIIKIVGTLMMMALGFMQTTRALNKRYRINKVSLIVEVSIGIILILVGVIMSQINIP . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 41714 42961 . + 0 GCA_005502385.1_02085 GCA_005502385.1_02085_gene,GCA_005502385.1_02085_mRNA GCA_005502385.1_02085 Copper transport protein YcnJ GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MVILKRSSKVAIALLMMFLFLFVPSMTKIASAHATLEKTTPAQNGIVSKQPDTIELTFNEPVNAEYSGITIYNDKGKKVADVKPSTIGHSDTLSFSGNQLKEGTQQIKWHTVSADGHEISDQFEFSVGKKTANGVDTTPVAYETPAFWFGVFRYIAEGATIILVGLYWLNGIARRNNLSTFDIFPRHVAVSLIMMMAYIMSLVLYLMTLSSDILDSVLTFNPSVLIQFPYILSAVALIILSGLFVLRNMERTWYWAISIIMILALSMSGHAWSQSAPVWSIILRTLHLAGISLWIGALIYLFSSVFTKKRDAVDLLREILFKVNGAAVAVIIITGILMSIDETKILSIWSNMQTWTILLIIKIVGTLMMMALGFMQTTRALNKRYRINKVSLIVEVSIGIILILVGVIMSQINIP persistent 415 copC Copper resistance protein CopC WP_069723777.1 UPI000851E9D3 UniRef100_UPI000851E9D3,UniRef50_A0A380FX74,UniRef90_A0A3S7GWD1 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 42978 43589 . + . GCA_005502385.1_02086_gene GCA_005502385.1_02086 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MFKKLFASGLVFFFSLGLFKYADAHVTINPKAVEPGSYEKVDVRVPVEQKDHTEKVELDIPKEVQVSNIQPVEGYKYSLDKDKKGNITKITWKAKDKGIGPNEFIEFPLLVESPKEEGTYSFKAVQTYDNKDKVKWTGKANSEHPAPTLEVEKNANAVTVKEDNAKKDERSQSSSGGSIALWIISLVAIILSLVALFKHARNK . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 42978 43589 . + . GCA_005502385.1_02086_mRNA GCA_005502385.1_02086 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MFKKLFASGLVFFFSLGLFKYADAHVTINPKAVEPGSYEKVDVRVPVEQKDHTEKVELDIPKEVQVSNIQPVEGYKYSLDKDKKGNITKITWKAKDKGIGPNEFIEFPLLVESPKEEGTYSFKAVQTYDNKDKVKWTGKANSEHPAPTLEVEKNANAVTVKEDNAKKDERSQSSSGGSIALWIISLVAIILSLVALFKHARNK . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 42978 43589 . + 0 GCA_005502385.1_02086 GCA_005502385.1_02086_gene,GCA_005502385.1_02086_mRNA GCA_005502385.1_02086 putative protein YcnI GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MFKKLFASGLVFFFSLGLFKYADAHVTINPKAVEPGSYEKVDVRVPVEQKDHTEKVELDIPKEVQVSNIQPVEGYKYSLDKDKKGNITKITWKAKDKGIGPNEFIEFPLLVESPKEEGTYSFKAVQTYDNKDKVKWTGKANSEHPAPTLEVEKNANAVTVKEDNAKKDERSQSSSGGSIALWIISLVAIILSLVALFKHARNK persistent 203 ycnI YcnI family protein WP_002454921.1 UPI0001EF5337 UniRef100_UPI0001EF5337,UniRef50_A0A640MXN6,UniRef90_A0A8X8GMM4 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 43720 44136 . + . GCA_005502385.1_02087_gene GCA_005502385.1_02087 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MRRLLYAFLVYMIIGLVSGFYYRELTKAHDFTGDTQLALVHTHTLILGMFMFLLLLPLEKVFKLSSFYLFNWFFIVYNVGVIITVGMMLTKGTYQVTGKSFSPEAFAGFAGIGHTGMLAGLLLLFFLLRQAILKEPRD . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 43720 44136 . + . GCA_005502385.1_02087_mRNA GCA_005502385.1_02087 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MRRLLYAFLVYMIIGLVSGFYYRELTKAHDFTGDTQLALVHTHTLILGMFMFLLLLPLEKVFKLSSFYLFNWFFIVYNVGVIITVGMMLTKGTYQVTGKSFSPEAFAGFAGIGHTGMLAGLLLLFFLLRQAILKEPRD . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 43720 44136 . + 0 GCA_005502385.1_02087 GCA_005502385.1_02087_gene,GCA_005502385.1_02087_mRNA GCA_005502385.1_02087 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MRRLLYAFLVYMIIGLVSGFYYRELTKAHDFTGDTQLALVHTHTLILGMFMFLLLLPLEKVFKLSSFYLFNWFFIVYNVGVIITVGMMLTKGTYQVTGKSFSPEAFAGFAGIGHTGMLAGLLLLFFLLRQAILKEPRD persistent 138 DUF2871 domain-containing protein WP_002454922.1 UPI0001EF5338 UniRef100_UPI0001EF5338,UniRef50_Q2FVP6,UniRef90_A0A8X8GND1 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 44225 44626 . + . GCA_005502385.1_02088_gene GCA_005502385.1_02088 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIHYSNHPPNVKDYCELRAKAGMSPKSERAAKKGLPHACFNITIYEESTLIGMGRVIGDGGTAFQIIDIAVHPYYQGQGFGKEILKQVMAFIENHAEKGTYVSLIADYPADQLYKKFGFQSTEPKSCGMFKKY . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 44225 44626 . + . GCA_005502385.1_02088_mRNA GCA_005502385.1_02088 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIHYSNHPPNVKDYCELRAKAGMSPKSERAAKKGLPHACFNITIYEESTLIGMGRVIGDGGTAFQIIDIAVHPYYQGQGFGKEILKQVMAFIENHAEKGTYVSLIADYPADQLYKKFGFQSTEPKSCGMFKKY . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 44225 44626 . + 0 GCA_005502385.1_02088 GCA_005502385.1_02088_gene,GCA_005502385.1_02088_mRNA GCA_005502385.1_02088 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIHYSNHPPNVKDYCELRAKAGMSPKSERAAKKGLPHACFNITIYEESTLIGMGRVIGDGGTAFQIIDIAVHPYYQGQGFGKEILKQVMAFIENHAEKGTYVSLIADYPADQLYKKFGFQSTEPKSCGMFKKY persistent 133 N-acetyltransferase WP_069723776.1 UPI00085209BB UniRef100_UPI00085209BB,UniRef50_A0A0M2NSA1,UniRef90_A0AAE5JM51 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 45028 53223 . + . GCA_005502385.1_02089_gene GCA_005502385.1_02089 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNYREKLQKFSIRKYTVGAFSTVIATLIFLGSPQAHASEQLQKDGQVIQAKARGQEQTSNETSNKQVQSNTEPKASPASESQKANNETLNKVQTADTLTNGLTSFSSQNENKDTSHTTTDLKANNEVQPQKNKLDDNSLAEVNEGHSPSDNRTRYEDREASDDTLVSSTSTTIDGDKLQAAYDRSYAEYQKIDREQSDNKKVAQIKATFDKVNDFFSTNDNTNQALINELYKELEQANVLIESLPQRQVRTISTRANREARAVRSSRRPVRGQGGTRPPSNTANTYTPPVVHNSRPKPGSKVKKNSDLYNNAKKEWYVENENDGSGYWSGTFLHATNKSAPYYTTRSHYRNMSPSSVRGIAEISSIRQNDGYLWTINFNKYHIKRNGMVFWFGLPKGQTPTGPVRFTVTDVNGRETASSGAGDGRDQSLSRMWDSAGGITSSAYNFRQGNPLNRSEFYNDSVNHIYNLGDFARGNENQPLTFFEREGVPNKIKVAGDDIYRYLTAQVDHNQGIDHIYAFQARGTDSYTIQFKTSGSSQDRLYYAAGGRGIEFNEINNYNQLYLEPLEQYNDRKTKIVDVIDRVLHIDHVESAYDVPERRIMKKHYLDSDFATHEYAEDVASYLSNPSDHVMGLFPRVPTDRYRGNFGVNPLNSYEIHEMFSEEKLKEAARTGRPIEIFVGFNVSDAYHNGETIKKVNLFVKPKLEQSIGFYSDNATDNKENSPESQAAHHAVFLQQEGQMLNTVTNGNNKDYHQNIRIQFKSNESANVWEISGYPPSLQIEDAVDRPNTELEKNKVLVGQLPPGRHVMTARIGNETKIFEVIAKPNPPVISTLAAQLGQKGGKKPTITVTHVPQDERAKVRLVSGGIDGAGPGTAPSGYTVLAEKMANLDGTVTFEESDYTNPLPNNGVIRAITYYEDSVQSNFSNSINVGLDTTPPTFSNVRGLQDKYYRGDNVNISIPVSDNAYGSGVEDASITGNSGLQAVFNRDASGDAGTLVITGTISNDVTWNSDILVQPVAHDRAGNTTNVSPYHLHIGKLSDDKPVQLFTQQELKTVVNPNSISQSERNDIINSLKAKNSSLTSFLSTFNPYMVDNDGRVVLTFKDGSTRIIDPTQVITYRPQRKSIYTEPGSSNTKEAFITIAKGQEYTIGPDLRKYFSLSNGQDIPNNAFTTINGSSIPSPQAISRLNAGIYTYDLDALNAYNHSSERLTIKVNVVDVNTLAENQRVYRSTTKNLSNDEITQVRNAFKDANPQLNLNDSDIRIENDEPLSNHPSRVRVTITKGELTKQFISTFDHMDFLKWINLRNDYTVTWTSQKLNGRGTDGGFEWSPDGKTIIYRYDATTGRRITGNDVLSLLRATPKHAGLRNHIEGQEKILAESGSARGFKPVGYSKGNSIYSDGEHPFTYDGQPIQVLDIVDSNTGYSNSVIARSDYRHTSSNSTVMSGDIPAMNGAAGFHLDKVLKQNGTGNGIMGAVDKQQLYLTPYGAKSYIERLGQSMSSTDNVINIVFVPTDKVTPNIVLDNYNDHVVFSGETFRNTLTLTDNFGIKNVTVPNDSQIPMNVLNHSILSGVAPNVSTPMSKQVKVKVTDGSDNETTAVFNVLIKPLKDKYSVMTTADESHPIRIANISNNASLSETDRQAIFNSLDISKSITNRNYVTDGSNEIRSREISNVHRSGNNANVEVTITYADNSRTSITVPVKHVIPNIRGIELFTVQGQPFPSGKGTNNNDFFVINNDQPLTDATVTWIGNGPDINSTTVGVPQILRANILFDGETTPIEKEAHYRVVKAKPKRVYQTTINGNFLSANEGSSSNVGAFVEGIANYLPSGTNFDWAPGSGRPLSNSPGVFTETINVIYPNGQVDPVNVLFKVKPTTPSIDALSTKYKADLSGQSIKVNNVPHNAQVKLYTEDGREMSNTTMTRNRDGSVSITIPGVLPLGNIKAKSIITVDHVTITEQNNSGSVVNSTRSESIESDLSASSPVTKQLEAVDGGLKFVKGDNIDLNNPRTYIKSNSDIIRVEWEQNANQWKNTIGTTTKRAIVTLSNGETRTVSIPVTIYAPATAKAPQRDVVGHALTYGDDAANYVTFENNYMNGATVTWKNNNAPSNNIAGVQSLTAEVRYNGINHVYNVPVKVYEYKYKFKKSEYSTIVGTSFEGNGNINNYVALENANGLPTDGFHFVWTQNTTASHSDQWSNLAHPNQAFKKEARFEVLDNQNHVFFTSDPAIFKVTNAVPNPATVTQNDVGDVVISPGVGKNLGVNAGNIIVNPDRITVKKGNQVIGTFVKNNTGKWAKASDSINTPGLSVSPDGNEIIYDKMSVPNDTLINTESTTGNGELTSEAATSATYKVKPATPSNTTFAFKQNGEFEVIPNNANASTTKNPTDKVKISYVEKMGNSAEQSRELIVTKNNQNRWSMNNQPDYVIFDSITGKVTFKANSLKPHVLINTESIAGNDDNFSHNTVGVVGPDHHDVIIHEIVKEPGERVSNEELNNAISVDNKDHANVNEGVSLPTNLQSDTTQAVPTRITYRDGSIEIVNVPIRTHADKSSIRNTLPKLDAQGDTNGKTPSSVSAYNNEMQHLHDEIEAVRRKANEVLSNDRATNTDVANVTNNINDVSLKIQHAISLLQNKADNSALVEAKRQLDEATAEQDPTPGMTQVTSDNYRAKKAEAERISAEAQGVINNGDATAEEIRNEKAKVEEALTQLTEAKNALKADKSVLEQKRPGLNHVGVTEG . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 45028 53223 . + . GCA_005502385.1_02089_mRNA GCA_005502385.1_02089 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNYREKLQKFSIRKYTVGAFSTVIATLIFLGSPQAHASEQLQKDGQVIQAKARGQEQTSNETSNKQVQSNTEPKASPASESQKANNETLNKVQTADTLTNGLTSFSSQNENKDTSHTTTDLKANNEVQPQKNKLDDNSLAEVNEGHSPSDNRTRYEDREASDDTLVSSTSTTIDGDKLQAAYDRSYAEYQKIDREQSDNKKVAQIKATFDKVNDFFSTNDNTNQALINELYKELEQANVLIESLPQRQVRTISTRANREARAVRSSRRPVRGQGGTRPPSNTANTYTPPVVHNSRPKPGSKVKKNSDLYNNAKKEWYVENENDGSGYWSGTFLHATNKSAPYYTTRSHYRNMSPSSVRGIAEISSIRQNDGYLWTINFNKYHIKRNGMVFWFGLPKGQTPTGPVRFTVTDVNGRETASSGAGDGRDQSLSRMWDSAGGITSSAYNFRQGNPLNRSEFYNDSVNHIYNLGDFARGNENQPLTFFEREGVPNKIKVAGDDIYRYLTAQVDHNQGIDHIYAFQARGTDSYTIQFKTSGSSQDRLYYAAGGRGIEFNEINNYNQLYLEPLEQYNDRKTKIVDVIDRVLHIDHVESAYDVPERRIMKKHYLDSDFATHEYAEDVASYLSNPSDHVMGLFPRVPTDRYRGNFGVNPLNSYEIHEMFSEEKLKEAARTGRPIEIFVGFNVSDAYHNGETIKKVNLFVKPKLEQSIGFYSDNATDNKENSPESQAAHHAVFLQQEGQMLNTVTNGNNKDYHQNIRIQFKSNESANVWEISGYPPSLQIEDAVDRPNTELEKNKVLVGQLPPGRHVMTARIGNETKIFEVIAKPNPPVISTLAAQLGQKGGKKPTITVTHVPQDERAKVRLVSGGIDGAGPGTAPSGYTVLAEKMANLDGTVTFEESDYTNPLPNNGVIRAITYYEDSVQSNFSNSINVGLDTTPPTFSNVRGLQDKYYRGDNVNISIPVSDNAYGSGVEDASITGNSGLQAVFNRDASGDAGTLVITGTISNDVTWNSDILVQPVAHDRAGNTTNVSPYHLHIGKLSDDKPVQLFTQQELKTVVNPNSISQSERNDIINSLKAKNSSLTSFLSTFNPYMVDNDGRVVLTFKDGSTRIIDPTQVITYRPQRKSIYTEPGSSNTKEAFITIAKGQEYTIGPDLRKYFSLSNGQDIPNNAFTTINGSSIPSPQAISRLNAGIYTYDLDALNAYNHSSERLTIKVNVVDVNTLAENQRVYRSTTKNLSNDEITQVRNAFKDANPQLNLNDSDIRIENDEPLSNHPSRVRVTITKGELTKQFISTFDHMDFLKWINLRNDYTVTWTSQKLNGRGTDGGFEWSPDGKTIIYRYDATTGRRITGNDVLSLLRATPKHAGLRNHIEGQEKILAESGSARGFKPVGYSKGNSIYSDGEHPFTYDGQPIQVLDIVDSNTGYSNSVIARSDYRHTSSNSTVMSGDIPAMNGAAGFHLDKVLKQNGTGNGIMGAVDKQQLYLTPYGAKSYIERLGQSMSSTDNVINIVFVPTDKVTPNIVLDNYNDHVVFSGETFRNTLTLTDNFGIKNVTVPNDSQIPMNVLNHSILSGVAPNVSTPMSKQVKVKVTDGSDNETTAVFNVLIKPLKDKYSVMTTADESHPIRIANISNNASLSETDRQAIFNSLDISKSITNRNYVTDGSNEIRSREISNVHRSGNNANVEVTITYADNSRTSITVPVKHVIPNIRGIELFTVQGQPFPSGKGTNNNDFFVINNDQPLTDATVTWIGNGPDINSTTVGVPQILRANILFDGETTPIEKEAHYRVVKAKPKRVYQTTINGNFLSANEGSSSNVGAFVEGIANYLPSGTNFDWAPGSGRPLSNSPGVFTETINVIYPNGQVDPVNVLFKVKPTTPSIDALSTKYKADLSGQSIKVNNVPHNAQVKLYTEDGREMSNTTMTRNRDGSVSITIPGVLPLGNIKAKSIITVDHVTITEQNNSGSVVNSTRSESIESDLSASSPVTKQLEAVDGGLKFVKGDNIDLNNPRTYIKSNSDIIRVEWEQNANQWKNTIGTTTKRAIVTLSNGETRTVSIPVTIYAPATAKAPQRDVVGHALTYGDDAANYVTFENNYMNGATVTWKNNNAPSNNIAGVQSLTAEVRYNGINHVYNVPVKVYEYKYKFKKSEYSTIVGTSFEGNGNINNYVALENANGLPTDGFHFVWTQNTTASHSDQWSNLAHPNQAFKKEARFEVLDNQNHVFFTSDPAIFKVTNAVPNPATVTQNDVGDVVISPGVGKNLGVNAGNIIVNPDRITVKKGNQVIGTFVKNNTGKWAKASDSINTPGLSVSPDGNEIIYDKMSVPNDTLINTESTTGNGELTSEAATSATYKVKPATPSNTTFAFKQNGEFEVIPNNANASTTKNPTDKVKISYVEKMGNSAEQSRELIVTKNNQNRWSMNNQPDYVIFDSITGKVTFKANSLKPHVLINTESIAGNDDNFSHNTVGVVGPDHHDVIIHEIVKEPGERVSNEELNNAISVDNKDHANVNEGVSLPTNLQSDTTQAVPTRITYRDGSIEIVNVPIRTHADKSSIRNTLPKLDAQGDTNGKTPSSVSAYNNEMQHLHDEIEAVRRKANEVLSNDRATNTDVANVTNNINDVSLKIQHAISLLQNKADNSALVEAKRQLDEATAEQDPTPGMTQVTSDNYRAKKAEAERISAEAQGVINNGDATAEEIRNEKAKVEEALTQLTEAKNALKADKSVLEQKRPGLNHVGVTEG . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 45028 53223 . + 0 GCA_005502385.1_02089 GCA_005502385.1_02089_gene,GCA_005502385.1_02089_mRNA GCA_005502385.1_02089 Extracellular matrix-binding protein ebh GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNYREKLQKFSIRKYTVGAFSTVIATLIFLGSPQAHASEQLQKDGQVIQAKARGQEQTSNETSNKQVQSNTEPKASPASESQKANNETLNKVQTADTLTNGLTSFSSQNENKDTSHTTTDLKANNEVQPQKNKLDDNSLAEVNEGHSPSDNRTRYEDREASDDTLVSSTSTTIDGDKLQAAYDRSYAEYQKIDREQSDNKKVAQIKATFDKVNDFFSTNDNTNQALINELYKELEQANVLIESLPQRQVRTISTRANREARAVRSSRRPVRGQGGTRPPSNTANTYTPPVVHNSRPKPGSKVKKNSDLYNNAKKEWYVENENDGSGYWSGTFLHATNKSAPYYTTRSHYRNMSPSSVRGIAEISSIRQNDGYLWTINFNKYHIKRNGMVFWFGLPKGQTPTGPVRFTVTDVNGRETASSGAGDGRDQSLSRMWDSAGGITSSAYNFRQGNPLNRSEFYNDSVNHIYNLGDFARGNENQPLTFFEREGVPNKIKVAGDDIYRYLTAQVDHNQGIDHIYAFQARGTDSYTIQFKTSGSSQDRLYYAAGGRGIEFNEINNYNQLYLEPLEQYNDRKTKIVDVIDRVLHIDHVESAYDVPERRIMKKHYLDSDFATHEYAEDVASYLSNPSDHVMGLFPRVPTDRYRGNFGVNPLNSYEIHEMFSEEKLKEAARTGRPIEIFVGFNVSDAYHNGETIKKVNLFVKPKLEQSIGFYSDNATDNKENSPESQAAHHAVFLQQEGQMLNTVTNGNNKDYHQNIRIQFKSNESANVWEISGYPPSLQIEDAVDRPNTELEKNKVLVGQLPPGRHVMTARIGNETKIFEVIAKPNPPVISTLAAQLGQKGGKKPTITVTHVPQDERAKVRLVSGGIDGAGPGTAPSGYTVLAEKMANLDGTVTFEESDYTNPLPNNGVIRAITYYEDSVQSNFSNSINVGLDTTPPTFSNVRGLQDKYYRGDNVNISIPVSDNAYGSGVEDASITGNSGLQAVFNRDASGDAGTLVITGTISNDVTWNSDILVQPVAHDRAGNTTNVSPYHLHIGKLSDDKPVQLFTQQELKTVVNPNSISQSERNDIINSLKAKNSSLTSFLSTFNPYMVDNDGRVVLTFKDGSTRIIDPTQVITYRPQRKSIYTEPGSSNTKEAFITIAKGQEYTIGPDLRKYFSLSNGQDIPNNAFTTINGSSIPSPQAISRLNAGIYTYDLDALNAYNHSSERLTIKVNVVDVNTLAENQRVYRSTTKNLSNDEITQVRNAFKDANPQLNLNDSDIRIENDEPLSNHPSRVRVTITKGELTKQFISTFDHMDFLKWINLRNDYTVTWTSQKLNGRGTDGGFEWSPDGKTIIYRYDATTGRRITGNDVLSLLRATPKHAGLRNHIEGQEKILAESGSARGFKPVGYSKGNSIYSDGEHPFTYDGQPIQVLDIVDSNTGYSNSVIARSDYRHTSSNSTVMSGDIPAMNGAAGFHLDKVLKQNGTGNGIMGAVDKQQLYLTPYGAKSYIERLGQSMSSTDNVINIVFVPTDKVTPNIVLDNYNDHVVFSGETFRNTLTLTDNFGIKNVTVPNDSQIPMNVLNHSILSGVAPNVSTPMSKQVKVKVTDGSDNETTAVFNVLIKPLKDKYSVMTTADESHPIRIANISNNASLSETDRQAIFNSLDISKSITNRNYVTDGSNEIRSREISNVHRSGNNANVEVTITYADNSRTSITVPVKHVIPNIRGIELFTVQGQPFPSGKGTNNNDFFVINNDQPLTDATVTWIGNGPDINSTTVGVPQILRANILFDGETTPIEKEAHYRVVKAKPKRVYQTTINGNFLSANEGSSSNVGAFVEGIANYLPSGTNFDWAPGSGRPLSNSPGVFTETINVIYPNGQVDPVNVLFKVKPTTPSIDALSTKYKADLSGQSIKVNNVPHNAQVKLYTEDGREMSNTTMTRNRDGSVSITIPGVLPLGNIKAKSIITVDHVTITEQNNSGSVVNSTRSESIESDLSASSPVTKQLEAVDGGLKFVKGDNIDLNNPRTYIKSNSDIIRVEWEQNANQWKNTIGTTTKRAIVTLSNGETRTVSIPVTIYAPATAKAPQRDVVGHALTYGDDAANYVTFENNYMNGATVTWKNNNAPSNNIAGVQSLTAEVRYNGINHVYNVPVKVYEYKYKFKKSEYSTIVGTSFEGNGNINNYVALENANGLPTDGFHFVWTQNTTASHSDQWSNLAHPNQAFKKEARFEVLDNQNHVFFTSDPAIFKVTNAVPNPATVTQNDVGDVVISPGVGKNLGVNAGNIIVNPDRITVKKGNQVIGTFVKNNTGKWAKASDSINTPGLSVSPDGNEIIYDKMSVPNDTLINTESTTGNGELTSEAATSATYKVKPATPSNTTFAFKQNGEFEVIPNNANASTTKNPTDKVKISYVEKMGNSAEQSRELIVTKNNQNRWSMNNQPDYVIFDSITGKVTFKANSLKPHVLINTESIAGNDDNFSHNTVGVVGPDHHDVIIHEIVKEPGERVSNEELNNAISVDNKDHANVNEGVSLPTNLQSDTTQAVPTRITYRDGSIEIVNVPIRTHADKSSIRNTLPKLDAQGDTNGKTPSSVSAYNNEMQHLHDEIEAVRRKANEVLSNDRATNTDVANVTNNINDVSLKIQHAISLLQNKADNSALVEAKRQLDEATAEQDPTPGMTQVTSDNYRAKKAEAERISAEAQGVINNGDATAEEIRNEKAKVEEALTQLTEAKNALKADKSVLEQKRPGLNHVGVTEG shell 2731 hyperosmolarity resistance protein Ebh UniRef50_A0AAE5JNR7,UniRef90_UPI001F5666EF . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 53385 53963 . - . GCA_005502385.1_02090_gene GCA_005502385.1_02090 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MVNLNHYIYSISDIRELINDESHFLNYIQEETNKFQTSSNPSIASYLKNKALIMNDQNSIRTYLVIDTDTLEIIGYFCLKIVNIKFEDDVSGNIKKKISSDAKKNDEFQALLITKLARNDKHKNLIPGKIIMEYALSIGIEIYKRTALRHICVDWYEDSNLKNFYCNQCGFKIFQEKDTDKGKLASAFYKFD . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0001 cloud . GCA_005502385.1|SCOV01000008.1 prokka mRNA 53385 53963 . - . GCA_005502385.1_02090_mRNA GCA_005502385.1_02090 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MVNLNHYIYSISDIRELINDESHFLNYIQEETNKFQTSSNPSIASYLKNKALIMNDQNSIRTYLVIDTDTLEIIGYFCLKIVNIKFEDDVSGNIKKKISSDAKKNDEFQALLITKLARNDKHKNLIPGKIIMEYALSIGIEIYKRTALRHICVDWYEDSNLKNFYCNQCGFKIFQEKDTDKGKLASAFYKFD . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0001 cloud . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 53385 53963 . - 0 GCA_005502385.1_02090 GCA_005502385.1_02090_gene,GCA_005502385.1_02090_mRNA GCA_005502385.1_02090 hypothetical protein """""" GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MVNLNHYIYSISDIRELINDESHFLNYIQEETNKFQTSSNPSIASYLKNKALIMNDQNSIRTYLVIDTDTLEIIGYFCLKIVNIKFEDDVSGNIKKKISSDAKKNDEFQALLITKLARNDKHKNLIPGKIIMEYALSIGIEIYKRTALRHICVDWYEDSNLKNFYCNQCGFKIFQEKDTDKGKLASAFYKFD cloud 192 Phage protein UniRef50_A0A2K4AIR8,UniRef90_UPI002FCA4E6B . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0001 cloud F.F-G GCA_005502385.1|SCOV01000008.1 prokka gene 53950 54102 . - . GCA_005502385.1_02091_gene GCA_005502385.1_02091 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MVAKERSSITLSKEEAVTFAAKKFKPFHNRIKKQNQKANPFIKLQNNGKS . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0001 cloud . GCA_005502385.1|SCOV01000008.1 prokka mRNA 53950 54102 . - . GCA_005502385.1_02091_mRNA GCA_005502385.1_02091 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MVAKERSSITLSKEEAVTFAAKKFKPFHNRIKKQNQKANPFIKLQNNGKS . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0001 cloud . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 53950 54102 . - 0 GCA_005502385.1_02091 GCA_005502385.1_02091_gene,GCA_005502385.1_02091_mRNA GCA_005502385.1_02091 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MVAKERSSITLSKEEAVTFAAKKFKPFHNRIKKQNQKANPFIKLQNNGKS cloud 50 hypothetical protein UniRef50_A0A9Q9K5D9,UniRef90_UPI002FC6EEB3 . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0001 cloud F.F-GN GCA_005502385.1|SCOV01000008.1 prokka gene 54221 55438 . - . GCA_005502385.1_02092_gene GCA_005502385.1_02092 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MWHEKFTNKHGETKYRYYEKYKDPLTNKWRRVSVVLNKNGKQSQKEAQKRLNERIEEKQNNKTPTTLKTLTFHAACDEWFENYKLTSGAKQSTIRAKTYRLAHIKERINEDILVDKMNAQVIQDYINTSMKENNIKHITIKVNVSLIKSVLKFAQKRYNISDISYIGNVSLPKKAVTREEIKAKRENYLEMNEVHKLIDELNHKASTSNKGYIKRSYMMTAYITEFQVLNGLRIGELLALQPENIDFKNKKIEIDGTIAWITKDGVRGFKDTTKTEASYRTISITTRSCEILRKVMLENKKSAKWDSNFKERNFIFTNSKGSPMPLSSINANIKNAAKNIGIEKDISTHTMRHSHISLLSQLGVSLRAIMDRVGHKDYKTTLQIYSHVTEQMDKDMMSKLEKVGI . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0002 shell . GCA_005502385.1|SCOV01000008.1 prokka mRNA 54221 55438 . - . GCA_005502385.1_02092_mRNA GCA_005502385.1_02092 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MWHEKFTNKHGETKYRYYEKYKDPLTNKWRRVSVVLNKNGKQSQKEAQKRLNERIEEKQNNKTPTTLKTLTFHAACDEWFENYKLTSGAKQSTIRAKTYRLAHIKERINEDILVDKMNAQVIQDYINTSMKENNIKHITIKVNVSLIKSVLKFAQKRYNISDISYIGNVSLPKKAVTREEIKAKRENYLEMNEVHKLIDELNHKASTSNKGYIKRSYMMTAYITEFQVLNGLRIGELLALQPENIDFKNKKIEIDGTIAWITKDGVRGFKDTTKTEASYRTISITTRSCEILRKVMLENKKSAKWDSNFKERNFIFTNSKGSPMPLSSINANIKNAAKNIGIEKDISTHTMRHSHISLLSQLGVSLRAIMDRVGHKDYKTTLQIYSHVTEQMDKDMMSKLEKVGI . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0002 shell . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 54221 55438 . - 0 GCA_005502385.1_02092 GCA_005502385.1_02092_gene,GCA_005502385.1_02092_mRNA GCA_005502385.1_02092 Tyrosine recombinase XerD GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MWHEKFTNKHGETKYRYYEKYKDPLTNKWRRVSVVLNKNGKQSQKEAQKRLNERIEEKQNNKTPTTLKTLTFHAACDEWFENYKLTSGAKQSTIRAKTYRLAHIKERINEDILVDKMNAQVIQDYINTSMKENNIKHITIKVNVSLIKSVLKFAQKRYNISDISYIGNVSLPKKAVTREEIKAKRENYLEMNEVHKLIDELNHKASTSNKGYIKRSYMMTAYITEFQVLNGLRIGELLALQPENIDFKNKKIEIDGTIAWITKDGVRGFKDTTKTEASYRTISITTRSCEILRKVMLENKKSAKWDSNFKERNFIFTNSKGSPMPLSSINANIKNAAKNIGIEKDISTHTMRHSHISLLSQLGVSLRAIMDRVGHKDYKTTLQIYSHVTEQMDKDMMSKLEKVGI shell 405 Site-specific integrase UniRef50_A0A0C6DXB6,UniRef90_A0AAE5MZ29 . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0002 shell F.F-GN GCA_005502385.1|SCOV01000008.1 prokka gene 55452 56843 . - . GCA_005502385.1_02093_gene GCA_005502385.1_02093 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKKILYYFILISSFFMIIGGISKVSQDGLTFPDIFMFIIFISLITFSIVKLFKHKNLNYKSNKSNNNHKKISNSDTTRSNNVQSNSHIKKNNVPRDTEINNSKKVKQTKPITNSKTDTSSKNKVNLNENVQKHNKVLVSEVKDDNNNNNHHSDLNANDILILHLNKNREVGKEVKNHFYLLENQINVDKILNKLINLGFLDIKSNFDVSLPYLKVPELKDILREYKLKLGGNKPELIERVKTNIDENAIELPQVYVPTSKGNEIIGETEYILHFYNSPIISLGSAHKIAKEVLNVDDKIEYIYLYLLQQNQKSKNSDHRTENIINNLVFYYKKTNKNKNVIRKYTNYSTYLSVAQGIHSAAFLYSDEDNIIDRLFIYFNYHLEYYENMLFIDNVSRSLFKNLFYEDVNSFEDTDKNFCDDICELLFAQIYNNKNITLNDLPTINYILEKIKKENELRITKYDF . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0003 cloud . GCA_005502385.1|SCOV01000008.1 prokka mRNA 55452 56843 . - . GCA_005502385.1_02093_mRNA GCA_005502385.1_02093 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKKILYYFILISSFFMIIGGISKVSQDGLTFPDIFMFIIFISLITFSIVKLFKHKNLNYKSNKSNNNHKKISNSDTTRSNNVQSNSHIKKNNVPRDTEINNSKKVKQTKPITNSKTDTSSKNKVNLNENVQKHNKVLVSEVKDDNNNNNHHSDLNANDILILHLNKNREVGKEVKNHFYLLENQINVDKILNKLINLGFLDIKSNFDVSLPYLKVPELKDILREYKLKLGGNKPELIERVKTNIDENAIELPQVYVPTSKGNEIIGETEYILHFYNSPIISLGSAHKIAKEVLNVDDKIEYIYLYLLQQNQKSKNSDHRTENIINNLVFYYKKTNKNKNVIRKYTNYSTYLSVAQGIHSAAFLYSDEDNIIDRLFIYFNYHLEYYENMLFIDNVSRSLFKNLFYEDVNSFEDTDKNFCDDICELLFAQIYNNKNITLNDLPTINYILEKIKKENELRITKYDF . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0003 cloud . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 55452 56843 . - 0 GCA_005502385.1_02093 GCA_005502385.1_02093_gene,GCA_005502385.1_02093_mRNA GCA_005502385.1_02093 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKKILYYFILISSFFMIIGGISKVSQDGLTFPDIFMFIIFISLITFSIVKLFKHKNLNYKSNKSNNNHKKISNSDTTRSNNVQSNSHIKKNNVPRDTEINNSKKVKQTKPITNSKTDTSSKNKVNLNENVQKHNKVLVSEVKDDNNNNNHHSDLNANDILILHLNKNREVGKEVKNHFYLLENQINVDKILNKLINLGFLDIKSNFDVSLPYLKVPELKDILREYKLKLGGNKPELIERVKTNIDENAIELPQVYVPTSKGNEIIGETEYILHFYNSPIISLGSAHKIAKEVLNVDDKIEYIYLYLLQQNQKSKNSDHRTENIINNLVFYYKKTNKNKNVIRKYTNYSTYLSVAQGIHSAAFLYSDEDNIIDRLFIYFNYHLEYYENMLFIDNVSRSLFKNLFYEDVNSFEDTDKNFCDDICELLFAQIYNNKNITLNDLPTINYILEKIKKENELRITKYDF cloud 463 SAP domain-containing protein WP_137689688.1 UPI0010F8E6ED UniRef100_UPI0010F8E6ED,UniRef50_A0A5S9EUS6,UniRef90_UPI00287A6699 . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0003 cloud F.F-GN GCA_005502385.1|SCOV01000008.1 prokka gene 56926 57633 . - . GCA_005502385.1_02094_gene GCA_005502385.1_02094 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKFGEILKEYRNSLNLSVNKLSKLSNVSVGYISKIENGKRNFPSIRTIFLLLVGFKNSKLSDQTKSIKDIDKEIKDILSEFISAEDSEIDRKELEKIYNDFNTFYEDLNNEESEKIEKNRKVSLFVFEESKNKIQDIKLKEPINDLSFHLDDNLNEKFFNGVLLNEYDKIMIKEIVNSILTSRIKQEDNYLSEDIEQLQKQFNDFRKEALLNKKQLKMFANHNSLQSLKENNKNN . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0004 cloud . GCA_005502385.1|SCOV01000008.1 prokka mRNA 56926 57633 . - . GCA_005502385.1_02094_mRNA GCA_005502385.1_02094 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKFGEILKEYRNSLNLSVNKLSKLSNVSVGYISKIENGKRNFPSIRTIFLLLVGFKNSKLSDQTKSIKDIDKEIKDILSEFISAEDSEIDRKELEKIYNDFNTFYEDLNNEESEKIEKNRKVSLFVFEESKNKIQDIKLKEPINDLSFHLDDNLNEKFFNGVLLNEYDKIMIKEIVNSILTSRIKQEDNYLSEDIEQLQKQFNDFRKEALLNKKQLKMFANHNSLQSLKENNKNN . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0004 cloud . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 56926 57633 . - 0 GCA_005502385.1_02094 GCA_005502385.1_02094_gene,GCA_005502385.1_02094_mRNA GCA_005502385.1_02094 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKFGEILKEYRNSLNLSVNKLSKLSNVSVGYISKIENGKRNFPSIRTIFLLLVGFKNSKLSDQTKSIKDIDKEIKDILSEFISAEDSEIDRKELEKIYNDFNTFYEDLNNEESEKIEKNRKVSLFVFEESKNKIQDIKLKEPINDLSFHLDDNLNEKFFNGVLLNEYDKIMIKEIVNSILTSRIKQEDNYLSEDIEQLQKQFNDFRKEALLNKKQLKMFANHNSLQSLKENNKNN cloud 235 helix-turn-helix domain-containing protein UniRef50_A0A640MXJ0,UniRef90_UPI00097754AB . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0004 cloud F.F-GN GCA_005502385.1|SCOV01000008.1 prokka gene 57775 57984 . + . GCA_005502385.1_02095_gene GCA_005502385.1_02095 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNNNLSMLMGRDRVSALKLSKETGISRTTIYGLYHERTKSPDMQTVMKLCDYFKVTPNEFFGIKEKEEV . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0005 shell . GCA_005502385.1|SCOV01000008.1 prokka mRNA 57775 57984 . + . GCA_005502385.1_02095_mRNA GCA_005502385.1_02095 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNNNLSMLMGRDRVSALKLSKETGISRTTIYGLYHERTKSPDMQTVMKLCDYFKVTPNEFFGIKEKEEV . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0005 shell . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 57775 57984 . + 0 GCA_005502385.1_02095 GCA_005502385.1_02095_gene,GCA_005502385.1_02095_mRNA GCA_005502385.1_02095 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNNNLSMLMGRDRVSALKLSKETGISRTTIYGLYHERTKSPDMQTVMKLCDYFKVTPNEFFGIKEKEEV shell 69 HTH cro/C1-type domain-containing protein WP_085060124.1 UPI000A117465 UniRef100_UPI000A117465,UniRef50_A0A640MY30,UniRef90_A0A640MY30 . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0005 shell F.F-GN GCA_005502385.1|SCOV01000008.1 prokka gene 57988 58260 . + . GCA_005502385.1_02096_gene GCA_005502385.1_02096 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MPHVKLQDLPTKENVVTEPKQVIVKPIMAKPNAIAKLFGISYSSVNRILKEYDKDNKGVEDLYYSLSSTMTVISIDGFKEYLSKRHKGWL . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0006 shell . GCA_005502385.1|SCOV01000008.1 prokka mRNA 57988 58260 . + . GCA_005502385.1_02096_mRNA GCA_005502385.1_02096 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MPHVKLQDLPTKENVVTEPKQVIVKPIMAKPNAIAKLFGISYSSVNRILKEYDKDNKGVEDLYYSLSSTMTVISIDGFKEYLSKRHKGWL . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0006 shell . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 57988 58260 . + 0 GCA_005502385.1_02096 GCA_005502385.1_02096_gene,GCA_005502385.1_02096_mRNA GCA_005502385.1_02096 hypothetical protein """""" GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MPHVKLQDLPTKENVVTEPKQVIVKPIMAKPNAIAKLFGISYSSVNRILKEYDKDNKGVEDLYYSLSSTMTVISIDGFKEYLSKRHKGWL shell 90 Helix-turn-helix domain-containing protein WP_054105604.1 UPI0006B9714F UniRef100_UPI0006B9714F,UniRef50_X5IY47,UniRef90_A0A640MXD3 . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0006 shell F.F-GN GCA_005502385.1|SCOV01000008.1 prokka gene 58277 58435 . + . GCA_005502385.1_02097_gene GCA_005502385.1_02097 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MAKFIVKLMSISVISFISGWLLGIHVAFTIYMLSSVIAALNIEENGGLVNEH . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0007 cloud . GCA_005502385.1|SCOV01000008.1 prokka mRNA 58277 58435 . + . GCA_005502385.1_02097_mRNA GCA_005502385.1_02097 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MAKFIVKLMSISVISFISGWLLGIHVAFTIYMLSSVIAALNIEENGGLVNEH . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0007 cloud . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 58277 58435 . + 0 GCA_005502385.1_02097 GCA_005502385.1_02097_gene,GCA_005502385.1_02097_mRNA GCA_005502385.1_02097 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MAKFIVKLMSISVISFISGWLLGIHVAFTIYMLSSVIAALNIEENGGLVNEH cloud 52 hypothetical protein UniRef50_A0A640N3E5,UniRef90_UPI001F56D312 . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0007 cloud F.F-GN GCA_005502385.1|SCOV01000008.1 prokka gene 58425 58838 . + . GCA_005502385.1_02098_gene GCA_005502385.1_02098 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNINQKLNTTNKFREENEKMKKLTNQDFKNIEGKLNYEHMVNGKKHTNKMIKLLQKRRAKNVSVIKSEYPYLSDNEILEILADYREYEDLLSATETFIDFPNIYEDSNIGKFLTKDDIEELKIAIEEMTVFVERLEE . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0008 cloud . GCA_005502385.1|SCOV01000008.1 prokka mRNA 58425 58838 . + . GCA_005502385.1_02098_mRNA GCA_005502385.1_02098 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNINQKLNTTNKFREENEKMKKLTNQDFKNIEGKLNYEHMVNGKKHTNKMIKLLQKRRAKNVSVIKSEYPYLSDNEILEILADYREYEDLLSATETFIDFPNIYEDSNIGKFLTKDDIEELKIAIEEMTVFVERLEE . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0008 cloud . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 58425 58838 . + 0 GCA_005502385.1_02098 GCA_005502385.1_02098_gene,GCA_005502385.1_02098_mRNA GCA_005502385.1_02098 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNINQKLNTTNKFREENEKMKKLTNQDFKNIEGKLNYEHMVNGKKHTNKMIKLLQKRRAKNVSVIKSEYPYLSDNEILEILADYREYEDLLSATETFIDFPNIYEDSNIGKFLTKDDIEELKIAIEEMTVFVERLEE cloud 137 pathogenicity island protein UniRef50_A0A894TPF6,UniRef90_UPI002878F5FA . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0008 cloud F.F-GN GCA_005502385.1|SCOV01000008.1 prokka gene 58842 59153 . + . GCA_005502385.1_02099_gene GCA_005502385.1_02099 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MLKDLKQIKESFEIADISNKIQAVIDYVCDEQEGLEDLRDYYKKSNQVVGEKQTNDNMKSNFIIISTLLSVIRDYESELDDIDTVIKRASSVPSDQTKTDNAE . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0009 cloud . GCA_005502385.1|SCOV01000008.1 prokka mRNA 58842 59153 . + . GCA_005502385.1_02099_mRNA GCA_005502385.1_02099 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MLKDLKQIKESFEIADISNKIQAVIDYVCDEQEGLEDLRDYYKKSNQVVGEKQTNDNMKSNFIIISTLLSVIRDYESELDDIDTVIKRASSVPSDQTKTDNAE . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0009 cloud . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 58842 59153 . + 0 GCA_005502385.1_02099 GCA_005502385.1_02099_gene,GCA_005502385.1_02099_mRNA GCA_005502385.1_02099 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MLKDLKQIKESFEIADISNKIQAVIDYVCDEQEGLEDLRDYYKKSNQVVGEKQTNDNMKSNFIIISTLLSVIRDYESELDDIDTVIKRASSVPSDQTKTDNAE cloud 103 hypothetical protein UniRef50_A0A7Z1N121,UniRef90_UPI000243254C . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0009 cloud F.F-GN GCA_005502385.1|SCOV01000008.1 prokka gene 59237 60850 . + . GCA_005502385.1_02100_gene GCA_005502385.1_02100 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MDEVSLYKKHYQFHSKLDNVDTPNLSRIKEISKRIYFAAITTEKQIFNNKGNIYHQAKDEFAGDYISNLTLDYTIKPREIGAVYGTISVKTTVENGEEKKEAHFKPSKINSYAKFIIDLITEKVIYSKELDSFIKLKSNQYEIIDNTNFSLEYPVDNKYHINDFLDVMLEVYKEYFINDYQYNIYPYAIAGNDWIYDCKELEFVNKKISNNDYYIIKYDVDKKNINTQLAQKFFDLVSDNERSKNNLMLVHAYTMYRKMKLIQAEKWFLIKDFGRSGKGLFMETFEKLLNVNKVNFDSLLSSGFEAANEWLNFYGADIAHANETGEINKGMMRILRKIATGENISGRGIQRNNVKFKNNAVLILDTNESVDTGEITANRTRTVKIAFKDRPKNETDEERYKVFKPYWDFVKPNGKNSVNASVSFLILSLEYLRQIGREFKFNNVTLKNYYNEDELTDTQILMLKVLSKQDFIFSGDEILQKTIEEDYKSLRYKKSKEDMKKIGVAINQQEWIEGQNTKVHKVKNQELFNMALALIET . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0010 cloud . GCA_005502385.1|SCOV01000008.1 prokka mRNA 59237 60850 . + . GCA_005502385.1_02100_mRNA GCA_005502385.1_02100 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MDEVSLYKKHYQFHSKLDNVDTPNLSRIKEISKRIYFAAITTEKQIFNNKGNIYHQAKDEFAGDYISNLTLDYTIKPREIGAVYGTISVKTTVENGEEKKEAHFKPSKINSYAKFIIDLITEKVIYSKELDSFIKLKSNQYEIIDNTNFSLEYPVDNKYHINDFLDVMLEVYKEYFINDYQYNIYPYAIAGNDWIYDCKELEFVNKKISNNDYYIIKYDVDKKNINTQLAQKFFDLVSDNERSKNNLMLVHAYTMYRKMKLIQAEKWFLIKDFGRSGKGLFMETFEKLLNVNKVNFDSLLSSGFEAANEWLNFYGADIAHANETGEINKGMMRILRKIATGENISGRGIQRNNVKFKNNAVLILDTNESVDTGEITANRTRTVKIAFKDRPKNETDEERYKVFKPYWDFVKPNGKNSVNASVSFLILSLEYLRQIGREFKFNNVTLKNYYNEDELTDTQILMLKVLSKQDFIFSGDEILQKTIEEDYKSLRYKKSKEDMKKIGVAINQQEWIEGQNTKVHKVKNQELFNMALALIET . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0010 cloud . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 59237 60850 . + 0 GCA_005502385.1_02100 GCA_005502385.1_02100_gene,GCA_005502385.1_02100_mRNA GCA_005502385.1_02100 hypothetical protein """""" GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MDEVSLYKKHYQFHSKLDNVDTPNLSRIKEISKRIYFAAITTEKQIFNNKGNIYHQAKDEFAGDYISNLTLDYTIKPREIGAVYGTISVKTTVENGEEKKEAHFKPSKINSYAKFIIDLITEKVIYSKELDSFIKLKSNQYEIIDNTNFSLEYPVDNKYHINDFLDVMLEVYKEYFINDYQYNIYPYAIAGNDWIYDCKELEFVNKKISNNDYYIIKYDVDKKNINTQLAQKFFDLVSDNERSKNNLMLVHAYTMYRKMKLIQAEKWFLIKDFGRSGKGLFMETFEKLLNVNKVNFDSLLSSGFEAANEWLNFYGADIAHANETGEINKGMMRILRKIATGENISGRGIQRNNVKFKNNAVLILDTNESVDTGEITANRTRTVKIAFKDRPKNETDEERYKVFKPYWDFVKPNGKNSVNASVSFLILSLEYLRQIGREFKFNNVTLKNYYNEDELTDTQILMLKVLSKQDFIFSGDEILQKTIEEDYKSLRYKKSKEDMKKIGVAINQQEWIEGQNTKVHKVKNQELFNMALALIET cloud 537 phage resistance protein UniRef50_X5IWZ2,UniRef90_UPI0034D4D6D3 . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0010 cloud F.F-GN GCA_005502385.1|SCOV01000008.1 prokka gene 61020 61841 . + . GCA_005502385.1_02101_gene GCA_005502385.1_02101 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKMYNAAKYLLSKDVQVVPLNDNKKPTVAFKNVTIDDDFIDNNFLAYANTNVLGVLTRGLWCIDIDINHVNGESGFDSLKDIPYYDEFVSNAQNTLVQTTASGGKHVIFKKRDGVEYAQKIGYLPSVDIKAHDNNYFVLAGSKTAKGLYTSNKKPVIAYDGEFEDRIFSKHGKYLQQTMEKFSVKSVLPNHNFNHLQHTGKGGLGKEAYNRVINGESIERNNDVYKAISYALQCNVDIEPLKVIIGDVKANGDEFTLEEWEASYNSARNSLRI . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0011 cloud . GCA_005502385.1|SCOV01000008.1 prokka mRNA 61020 61841 . + . GCA_005502385.1_02101_mRNA GCA_005502385.1_02101 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKMYNAAKYLLSKDVQVVPLNDNKKPTVAFKNVTIDDDFIDNNFLAYANTNVLGVLTRGLWCIDIDINHVNGESGFDSLKDIPYYDEFVSNAQNTLVQTTASGGKHVIFKKRDGVEYAQKIGYLPSVDIKAHDNNYFVLAGSKTAKGLYTSNKKPVIAYDGEFEDRIFSKHGKYLQQTMEKFSVKSVLPNHNFNHLQHTGKGGLGKEAYNRVINGESIERNNDVYKAISYALQCNVDIEPLKVIIGDVKANGDEFTLEEWEASYNSARNSLRI . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0011 cloud . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 61020 61841 . + 0 GCA_005502385.1_02101 GCA_005502385.1_02101_gene,GCA_005502385.1_02101_mRNA GCA_005502385.1_02101 hypothetical protein """""" GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKMYNAAKYLLSKDVQVVPLNDNKKPTVAFKNVTIDDDFIDNNFLAYANTNVLGVLTRGLWCIDIDINHVNGESGFDSLKDIPYYDEFVSNAQNTLVQTTASGGKHVIFKKRDGVEYAQKIGYLPSVDIKAHDNNYFVLAGSKTAKGLYTSNKKPVIAYDGEFEDRIFSKHGKYLQQTMEKFSVKSVLPNHNFNHLQHTGKGGLGKEAYNRVINGESIERNNDVYKAISYALQCNVDIEPLKVIIGDVKANGDEFTLEEWEASYNSARNSLRI cloud 273 DNA primase/polymerase bifunctional N-terminal domain-containing protein UniRef50_K9AV20,UniRef90_A0A640MYN0 . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0011 cloud F.F-GN GCA_005502385.1|SCOV01000008.1 prokka gene 61816 62097 . + . GCA_005502385.1_02102_gene GCA_005502385.1_02102 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MQETHYEFNIDDELRKLGLLVGISEEMYCCSISRISTLYLENFGTKWVAWRETYDFKNDKRVSYRTIANGSFELVAARTKNYLNYIKRKQGIK . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0012 cloud . GCA_005502385.1|SCOV01000008.1 prokka mRNA 61816 62097 . + . GCA_005502385.1_02102_mRNA GCA_005502385.1_02102 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MQETHYEFNIDDELRKLGLLVGISEEMYCCSISRISTLYLENFGTKWVAWRETYDFKNDKRVSYRTIANGSFELVAARTKNYLNYIKRKQGIK . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0012 cloud . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 61816 62097 . + 0 GCA_005502385.1_02102 GCA_005502385.1_02102_gene,GCA_005502385.1_02102_mRNA GCA_005502385.1_02102 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MQETHYEFNIDDELRKLGLLVGISEEMYCCSISRISTLYLENFGTKWVAWRETYDFKNDKRVSYRTIANGSFELVAARTKNYLNYIKRKQGIK cloud 93 Pathogenicity island protein UniRef50_A0A640MXU1,UniRef90_A0A640MXU1 . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0012 cloud F.F-GN GCA_005502385.1|SCOV01000008.1 prokka gene 62094 62738 . + . GCA_005502385.1_02103_gene GCA_005502385.1_02103 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNVEIIANEFETRAATLLRYFTGLCESSYKVPFAFKIYNDPFNTVYLVSKGKMYAHVLIKDCEVRKTFEIASEKHTEKLIESIEGYYAGYELHDGTHDTISDMMAEFMFDNDYFMYGLETFAESNNSDMFDYMSRDFNIAELEDVQSSNADVIGNMEMLYQLATGINEPAPELVEGLKIITEFIQNEQANRKDYLALELKLKGLKNSYYNGVKA . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0013 shell . GCA_005502385.1|SCOV01000008.1 prokka mRNA 62094 62738 . + . GCA_005502385.1_02103_mRNA GCA_005502385.1_02103 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNVEIIANEFETRAATLLRYFTGLCESSYKVPFAFKIYNDPFNTVYLVSKGKMYAHVLIKDCEVRKTFEIASEKHTEKLIESIEGYYAGYELHDGTHDTISDMMAEFMFDNDYFMYGLETFAESNNSDMFDYMSRDFNIAELEDVQSSNADVIGNMEMLYQLATGINEPAPELVEGLKIITEFIQNEQANRKDYLALELKLKGLKNSYYNGVKA . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0013 shell . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 62094 62738 . + 0 GCA_005502385.1_02103 GCA_005502385.1_02103_gene,GCA_005502385.1_02103_mRNA GCA_005502385.1_02103 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNVEIIANEFETRAATLLRYFTGLCESSYKVPFAFKIYNDPFNTVYLVSKGKMYAHVLIKDCEVRKTFEIASEKHTEKLIESIEGYYAGYELHDGTHDTISDMMAEFMFDNDYFMYGLETFAESNNSDMFDYMSRDFNIAELEDVQSSNADVIGNMEMLYQLATGINEPAPELVEGLKIITEFIQNEQANRKDYLALELKLKGLKNSYYNGVKA shell 214 pathogenicity island protein UniRef50_Q4L4M5,UniRef90_UPI001F18D7BE . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0013 shell F.F-GN GCA_005502385.1|SCOV01000008.1 prokka gene 63155 63487 . + . GCA_005502385.1_02104_gene GCA_005502385.1_02104 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTITIEKELTQDHIKVLNVLRNTKHNIITKQNIFNQLNMEFTKNNERWLQHTINSLVVEHGYPIGYSYKKDTRGYFWIKSKEQKELALLSIKRHIEGSMKRYEALKKTEI . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0014 shell . GCA_005502385.1|SCOV01000008.1 prokka mRNA 63155 63487 . + . GCA_005502385.1_02104_mRNA GCA_005502385.1_02104 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTITIEKELTQDHIKVLNVLRNTKHNIITKQNIFNQLNMEFTKNNERWLQHTINSLVVEHGYPIGYSYKKDTRGYFWIKSKEQKELALLSIKRHIEGSMKRYEALKKTEI . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0014 shell . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 63155 63487 . + 0 GCA_005502385.1_02104 GCA_005502385.1_02104_gene,GCA_005502385.1_02104_mRNA GCA_005502385.1_02104 hypothetical protein """""" GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTITIEKELTQDHIKVLNVLRNTKHNIITKQNIFNQLNMEFTKNNERWLQHTINSLVVEHGYPIGYSYKKDTRGYFWIKSKEQKELALLSIKRHIEGSMKRYEALKKTEI shell 110 Pathogenicity island protein WP_070813162.1 UPI0008A9D4B9 UniRef100_UPI0008A9D4B9,UniRef50_A0A640MXL7,UniRef90_A0A640MXL7 . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0014 shell F.F-GN GCA_005502385.1|SCOV01000008.1 prokka gene 63497 64249 . + . GCA_005502385.1_02105_gene GCA_005502385.1_02105 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSAAIEIIQEKVSDYELFTRFNTYYIQSRIALIESDIEDMYDRTTPSLCSDTVSESIYYESYSVENLAIAILEERQKLERYKSRSQRDLNAFYTVLGRFSTKEQKYIKNYINTRSEAHMNVIERFKIELYKYIQTNRNERNKGIENNYSYINDKRQKVKTYPHKLTLNQEKALREKEDGATEKNMNNDEFVAKLNDLDKKSFKEFIYNRNENNIDFEKVLILLQAIPKRLPQKEIKKPYNYIREIGLKTN . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0015 shell . GCA_005502385.1|SCOV01000008.1 prokka mRNA 63497 64249 . + . GCA_005502385.1_02105_mRNA GCA_005502385.1_02105 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSAAIEIIQEKVSDYELFTRFNTYYIQSRIALIESDIEDMYDRTTPSLCSDTVSESIYYESYSVENLAIAILEERQKLERYKSRSQRDLNAFYTVLGRFSTKEQKYIKNYINTRSEAHMNVIERFKIELYKYIQTNRNERNKGIENNYSYINDKRQKVKTYPHKLTLNQEKALREKEDGATEKNMNNDEFVAKLNDLDKKSFKEFIYNRNENNIDFEKVLILLQAIPKRLPQKEIKKPYNYIREIGLKTN . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0015 shell . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 63497 64249 . + 0 GCA_005502385.1_02105 GCA_005502385.1_02105_gene,GCA_005502385.1_02105_mRNA GCA_005502385.1_02105 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSAAIEIIQEKVSDYELFTRFNTYYIQSRIALIESDIEDMYDRTTPSLCSDTVSESIYYESYSVENLAIAILEERQKLERYKSRSQRDLNAFYTVLGRFSTKEQKYIKNYINTRSEAHMNVIERFKIELYKYIQTNRNERNKGIENNYSYINDKRQKVKTYPHKLTLNQEKALREKEDGATEKNMNNDEFVAKLNDLDKKSFKEFIYNRNENNIDFEKVLILLQAIPKRLPQKEIKKPYNYIREIGLKTN shell 250 Pathogenicity island protein WP_070813163.1 UPI0008A95A36 UniRef100_UPI0008A95A36,UniRef50_A0AAE5QZM0,UniRef90_A0A2K0A6V5 . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0015 shell F.F-GN GCA_005502385.1|SCOV01000008.1 prokka gene 64264 64851 . + . GCA_005502385.1_02106_gene GCA_005502385.1_02106 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKTEKYFDEYNEYVIGQRESIDKLEKERQELIQRIKEDKAKYKELIANSQDDEADELYNTFDSNEKKLKALEKRLSTKKEVFDEARRKKAIEIIKHQADLPHLYKKDKERILAKFEPIVEEYNKVVDEIAALNDEYEIEFDRFVRVYDKENFEEDKEVRAEIKNYFSPIKYSNYVSGNELPIIDIRNKMKLRGAK . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0016 cloud . GCA_005502385.1|SCOV01000008.1 prokka mRNA 64264 64851 . + . GCA_005502385.1_02106_mRNA GCA_005502385.1_02106 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKTEKYFDEYNEYVIGQRESIDKLEKERQELIQRIKEDKAKYKELIANSQDDEADELYNTFDSNEKKLKALEKRLSTKKEVFDEARRKKAIEIIKHQADLPHLYKKDKERILAKFEPIVEEYNKVVDEIAALNDEYEIEFDRFVRVYDKENFEEDKEVRAEIKNYFSPIKYSNYVSGNELPIIDIRNKMKLRGAK . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0016 cloud . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 64264 64851 . + 0 GCA_005502385.1_02106 GCA_005502385.1_02106_gene,GCA_005502385.1_02106_mRNA GCA_005502385.1_02106 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKTEKYFDEYNEYVIGQRESIDKLEKERQELIQRIKEDKAKYKELIANSQDDEADELYNTFDSNEKKLKALEKRLSTKKEVFDEARRKKAIEIIKHQADLPHLYKKDKERILAKFEPIVEEYNKVVDEIAALNDEYEIEFDRFVRVYDKENFEEDKEVRAEIKNYFSPIKYSNYVSGNELPIIDIRNKMKLRGAK cloud 195 pathogenicity island protein WP_070813164.1 UPI0008A95402 UniRef100_UPI0008A95402,UniRef50_Q4L4M8,UniRef90_UPI0011A7285B . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0016 cloud F.F-GN GCA_005502385.1|SCOV01000008.1 prokka gene 64851 65060 . + . GCA_005502385.1_02107_gene GCA_005502385.1_02107 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MARKHNLDKVSNYLLTETTLSVDECQKVLDVVEQQISQNIQQQRKDELTQQSQRDRSLMKMFEENRIVK . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0017 cloud . GCA_005502385.1|SCOV01000008.1 prokka mRNA 64851 65060 . + . GCA_005502385.1_02107_mRNA GCA_005502385.1_02107 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MARKHNLDKVSNYLLTETTLSVDECQKVLDVVEQQISQNIQQQRKDELTQQSQRDRSLMKMFEENRIVK . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0017 cloud . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 64851 65060 . + 0 GCA_005502385.1_02107 GCA_005502385.1_02107_gene,GCA_005502385.1_02107_mRNA GCA_005502385.1_02107 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MARKHNLDKVSNYLLTETTLSVDECQKVLDVVEQQISQNIQQQRKDELTQQSQRDRSLMKMFEENRIVK cloud 69 DUF536 domain-containing protein WP_070813165.1 UPI0008A97D39 UniRef100_UPI0008A97D39,UniRef50_A0A2K0AWG5,UniRef90_UPI0026DF8C01 . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0017 cloud F.F-GN GCA_005502385.1|SCOV01000008.1 prokka gene 65115 65552 . + . GCA_005502385.1_02108_gene GCA_005502385.1_02108 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNLKRVNYSLSYYETKISEYTLLTEYNPKFINTKIKAITTQIEMMYHLNISHMTTSDVHGVVSISYPLEKLVINIIDEKEKLHRFKTKSNRNMQQLKQVIKRYTPSEQKKVMYYMQSNGSVIDYDLIERLQRDLYAYKHKVSVAT . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0018 shell . GCA_005502385.1|SCOV01000008.1 prokka mRNA 65115 65552 . + . GCA_005502385.1_02108_mRNA GCA_005502385.1_02108 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNLKRVNYSLSYYETKISEYTLLTEYNPKFINTKIKAITTQIEMMYHLNISHMTTSDVHGVVSISYPLEKLVINIIDEKEKLHRFKTKSNRNMQQLKQVIKRYTPSEQKKVMYYMQSNGSVIDYDLIERLQRDLYAYKHKVSVAT . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0018 shell . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 65115 65552 . + 0 GCA_005502385.1_02108 GCA_005502385.1_02108_gene,GCA_005502385.1_02108_mRNA GCA_005502385.1_02108 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNLKRVNYSLSYYETKISEYTLLTEYNPKFINTKIKAITTQIEMMYHLNISHMTTSDVHGVVSISYPLEKLVINIIDEKEKLHRFKTKSNRNMQQLKQVIKRYTPSEQKKVMYYMQSNGSVIDYDLIERLQRDLYAYKHKVSVAT shell 145 Pathogenicity island protein UniRef50_Q4L4N0,UniRef90_A0AAE5JP88 . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0018 shell F.F-GN GCA_005502385.1|SCOV01000008.1 prokka gene 65549 65887 . + . GCA_005502385.1_02109_gene GCA_005502385.1_02109 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MMYDKQAIKQFIMDYHKEKASNVVSYDDTNIDDFFSLSDEVEPFELSENTGNQVFFNELDQLIYAVATRREYYIFFLLCEGKSMNEIAKIFELSRERIRQLLNGLLDKLEEG . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0019 shell . GCA_005502385.1|SCOV01000008.1 prokka mRNA 65549 65887 . + . GCA_005502385.1_02109_mRNA GCA_005502385.1_02109 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MMYDKQAIKQFIMDYHKEKASNVVSYDDTNIDDFFSLSDEVEPFELSENTGNQVFFNELDQLIYAVATRREYYIFFLLCEGKSMNEIAKIFELSRERIRQLLNGLLDKLEEG . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0019 shell . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 65549 65887 . + 0 GCA_005502385.1_02109 GCA_005502385.1_02109_gene,GCA_005502385.1_02109_mRNA GCA_005502385.1_02109 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MMYDKQAIKQFIMDYHKEKASNVVSYDDTNIDDFFSLSDEVEPFELSENTGNQVFFNELDQLIYAVATRREYYIFFLLCEGKSMNEIAKIFELSRERIRQLLNGLLDKLEEG shell 112 RNA polymerase subunit sigma-70 WP_070813167.1 UPI0008A854F0 UniRef100_UPI0008A854F0,UniRef50_Q4L4N1,UniRef90_A0AAE5JM56 . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0019 shell F.F-GN GCA_005502385.1|SCOV01000008.1 prokka gene 65889 66461 . + . GCA_005502385.1_02110_gene GCA_005502385.1_02110 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSDLNPRQEKFISEYLKTLNVTQSAIKAGYSPHTATVQGSRLLKNEKVAKYIDEQRKKVIDEGVLSANELLHILSNAAVGDESEVREVVVKRGEFQRNPDTDKMNLVYNEHVEMVEVPIKPSDRLRARDMLGKYHKLFTDKKELSTDTPIFINIGEWPEDEEEEKRKALDEIHEQHPNRTMIINDIPDED . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0020 shell . GCA_005502385.1|SCOV01000008.1 prokka mRNA 65889 66461 . + . GCA_005502385.1_02110_mRNA GCA_005502385.1_02110 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSDLNPRQEKFISEYLKTLNVTQSAIKAGYSPHTATVQGSRLLKNEKVAKYIDEQRKKVIDEGVLSANELLHILSNAAVGDESEVREVVVKRGEFQRNPDTDKMNLVYNEHVEMVEVPIKPSDRLRARDMLGKYHKLFTDKKELSTDTPIFINIGEWPEDEEEEKRKALDEIHEQHPNRTMIINDIPDED . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0020 shell . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 65889 66461 . + 0 GCA_005502385.1_02110 GCA_005502385.1_02110_gene,GCA_005502385.1_02110_mRNA GCA_005502385.1_02110 hypothetical protein """""" GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSDLNPRQEKFISEYLKTLNVTQSAIKAGYSPHTATVQGSRLLKNEKVAKYIDEQRKKVIDEGVLSANELLHILSNAAVGDESEVREVVVKRGEFQRNPDTDKMNLVYNEHVEMVEVPIKPSDRLRARDMLGKYHKLFTDKKELSTDTPIFINIGEWPEDEEEEKRKALDEIHEQHPNRTMIINDIPDED shell 190 xtmA Terminase small subunit COG3728,X WP_002448435.1 UPI00019FCE56 UniRef100_UPI00019FCE56,UniRef50_Q4L4N2,UniRef90_A0A2A1K7U6 . . . YES GCA_005502385.1|SCOV01000008.1@region_53950_68458@tool_genomad_CDS_0020 shell F.F-G GCA_005502385.1|SCOV01000008.1 prokka gene 68573 69031 . + . GCA_005502385.1_02111_gene GCA_005502385.1_02111 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNYKIEVLDDCNVIYVRNKGKYGSNRNYEMMKNFKEWIKENSYWRYVETNGILGVALDDPQIVEEELCRYDLVLKIDEDVKINDFINSRSFTGGKYVVFAIPHTTKDVKDFYSNLPDIIDNNKLRVKNEPILERYKEEEGKDKYCEILIPVL . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 68573 69031 . + . GCA_005502385.1_02111_mRNA GCA_005502385.1_02111 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNYKIEVLDDCNVIYVRNKGKYGSNRNYEMMKNFKEWIKENSYWRYVETNGILGVALDDPQIVEEELCRYDLVLKIDEDVKINDFINSRSFTGGKYVVFAIPHTTKDVKDFYSNLPDIIDNNKLRVKNEPILERYKEEEGKDKYCEILIPVL . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 68573 69031 . + 0 GCA_005502385.1_02111 GCA_005502385.1_02111_gene,GCA_005502385.1_02111_mRNA GCA_005502385.1_02111 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNYKIEVLDDCNVIYVRNKGKYGSNRNYEMMKNFKEWIKENSYWRYVETNGILGVALDDPQIVEEELCRYDLVLKIDEDVKINDFINSRSFTGGKYVVFAIPHTTKDVKDFYSNLPDIIDNNKLRVKNEPILERYKEEEGKDKYCEILIPVL cloud 152 sbmC Bacterial transcription activator effector binding domain-containing protein COG3449,L WP_137689697.1 UPI0009283C58 UniRef100_UPI0009283C58,UniRef50_A0A0P0YQ19,UniRef90_A0A0P0YQ19 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 69304 71640 . + . GCA_005502385.1_02112_gene GCA_005502385.1_02112 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTAYNNEMAKIHDELEAAKTEADRVIHDDNATPAQVTAAIAKIDAVQPKLDNAISLLHDKENNSELVEAKRQLDEATAEQDPTPGMTEVTANNYKAKKAEAEQVSRDAQKVIENDNATSGEIAQAIAKVNEAIGALKQAKHDLVPDKTLLNNAKNNLETSINQVPQTKNMTSDSVENYRNKLSQAKDTLANAQKVIDDPTSTVDEINKTIENVKRAKDELEQAKHDLILDYDAIIKKIKQQTDLTDAQKDKLIEKTKASTTSDELENIKHNTDLLNDAMKQLKENIAEKDKVKASINYTDGDKDKKDTYDDALKEAEKLINDAKNPIIDPSVINQLKDKIIDAKNNLNGVEKLQNAKNNVKHILESLKHLNNAQKDAFNNKIDNENSRDNLDIIINKAKEVDKAMKHLIDEMADNLDIKHSVNYSEASPDKKSAYDELIKKAEDLINKGIGTNASLEEINKLIQDIKKAKYDLDGKHQVELAKQKALEELENEVNRLKDEIDNNPNLSKEDKEKLKSKLERLLENAKGQINNATTLTDLNKIKNNTQKEIDKLKALIDAKTLAKQEIIDFANKKHQEILNNSNLTDAQKQKVVAEIDKTLQKVLENIDNANDINEINRKLKEGKDNIAKIVAKEITNALIDNKIKEIKARKDLTDEQKAKLIDYLEKLRRDTLKEIDKSHIDDIGSIIQQLMDKLNMLDIDKIENILSHNNKDNNQNQSNIDGIQSNNSHLSKSHRLPDTGSESTSIQLEIELMTLLVGLGLVLKNRRKKQKNNKNKR . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 69304 71640 . + . GCA_005502385.1_02112_mRNA GCA_005502385.1_02112 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTAYNNEMAKIHDELEAAKTEADRVIHDDNATPAQVTAAIAKIDAVQPKLDNAISLLHDKENNSELVEAKRQLDEATAEQDPTPGMTEVTANNYKAKKAEAEQVSRDAQKVIENDNATSGEIAQAIAKVNEAIGALKQAKHDLVPDKTLLNNAKNNLETSINQVPQTKNMTSDSVENYRNKLSQAKDTLANAQKVIDDPTSTVDEINKTIENVKRAKDELEQAKHDLILDYDAIIKKIKQQTDLTDAQKDKLIEKTKASTTSDELENIKHNTDLLNDAMKQLKENIAEKDKVKASINYTDGDKDKKDTYDDALKEAEKLINDAKNPIIDPSVINQLKDKIIDAKNNLNGVEKLQNAKNNVKHILESLKHLNNAQKDAFNNKIDNENSRDNLDIIINKAKEVDKAMKHLIDEMADNLDIKHSVNYSEASPDKKSAYDELIKKAEDLINKGIGTNASLEEINKLIQDIKKAKYDLDGKHQVELAKQKALEELENEVNRLKDEIDNNPNLSKEDKEKLKSKLERLLENAKGQINNATTLTDLNKIKNNTQKEIDKLKALIDAKTLAKQEIIDFANKKHQEILNNSNLTDAQKQKVVAEIDKTLQKVLENIDNANDINEINRKLKEGKDNIAKIVAKEITNALIDNKIKEIKARKDLTDEQKAKLIDYLEKLRRDTLKEIDKSHIDDIGSIIQQLMDKLNMLDIDKIENILSHNNKDNNQNQSNIDGIQSNNSHLSKSHRLPDTGSESTSIQLEIELMTLLVGLGLVLKNRRKKQKNNKNKR . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 69304 71640 . + 0 GCA_005502385.1_02112 GCA_005502385.1_02112_gene,GCA_005502385.1_02112_mRNA GCA_005502385.1_02112 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTAYNNEMAKIHDELEAAKTEADRVIHDDNATPAQVTAAIAKIDAVQPKLDNAISLLHDKENNSELVEAKRQLDEATAEQDPTPGMTEVTANNYKAKKAEAEQVSRDAQKVIENDNATSGEIAQAIAKVNEAIGALKQAKHDLVPDKTLLNNAKNNLETSINQVPQTKNMTSDSVENYRNKLSQAKDTLANAQKVIDDPTSTVDEINKTIENVKRAKDELEQAKHDLILDYDAIIKKIKQQTDLTDAQKDKLIEKTKASTTSDELENIKHNTDLLNDAMKQLKENIAEKDKVKASINYTDGDKDKKDTYDDALKEAEKLINDAKNPIIDPSVINQLKDKIIDAKNNLNGVEKLQNAKNNVKHILESLKHLNNAQKDAFNNKIDNENSRDNLDIIINKAKEVDKAMKHLIDEMADNLDIKHSVNYSEASPDKKSAYDELIKKAEDLINKGIGTNASLEEINKLIQDIKKAKYDLDGKHQVELAKQKALEELENEVNRLKDEIDNNPNLSKEDKEKLKSKLERLLENAKGQINNATTLTDLNKIKNNTQKEIDKLKALIDAKTLAKQEIIDFANKKHQEILNNSNLTDAQKQKVVAEIDKTLQKVLENIDNANDINEINRKLKEGKDNIAKIVAKEITNALIDNKIKEIKARKDLTDEQKAKLIDYLEKLRRDTLKEIDKSHIDDIGSIIQQLMDKLNMLDIDKIENILSHNNKDNNQNQSNIDGIQSNNSHLSKSHRLPDTGSESTSIQLEIELMTLLVGLGLVLKNRRKKQKNNKNKR shell 778 Gram-positive cocci surface proteins LPxTG domain-containing protein UniRef50_A0AAE5MZD8,UniRef90_A0AAE5MZD8 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 71730 72725 . - . GCA_005502385.1_02113_gene GCA_005502385.1_02113 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSVNFKAFMVEKDNDGTVTSDFKDLSINDLPEGEVLIKVQYSGINYKDALATVKDSGVLKSYPMVPGIDLAGTVVESDDPTIEKGEEVIITGYDLGVNHYGGFSEYARVKSDWIVKCPENLTLEEAMIYGTAGYTAGLAIEKLEKANFMTLEGDKVLVRGASGGVGSLAVMMLNELGYKVVASTGNKKATNKLKELGAREVIDRISEDSNEILGKRTWQAAIDPCGGPGTPYIAKHLTNGGGVALIGMTGGNHFETSVFPFILRGVSVVGLDSVMTPMKLRQRVWRRLATDLKSDKLHEIKNTIAFKDLKHSIETVLNHENAGRIIIDFEA . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 71730 72725 . - . GCA_005502385.1_02113_mRNA GCA_005502385.1_02113 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSVNFKAFMVEKDNDGTVTSDFKDLSINDLPEGEVLIKVQYSGINYKDALATVKDSGVLKSYPMVPGIDLAGTVVESDDPTIEKGEEVIITGYDLGVNHYGGFSEYARVKSDWIVKCPENLTLEEAMIYGTAGYTAGLAIEKLEKANFMTLEGDKVLVRGASGGVGSLAVMMLNELGYKVVASTGNKKATNKLKELGAREVIDRISEDSNEILGKRTWQAAIDPCGGPGTPYIAKHLTNGGGVALIGMTGGNHFETSVFPFILRGVSVVGLDSVMTPMKLRQRVWRRLATDLKSDKLHEIKNTIAFKDLKHSIETVLNHENAGRIIIDFEA . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 71730 72725 . - 0 GCA_005502385.1_02113 GCA_005502385.1_02113_gene,GCA_005502385.1_02113_mRNA GCA_005502385.1_02113 Putative quinone oxidoreductase YhfP GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSVNFKAFMVEKDNDGTVTSDFKDLSINDLPEGEVLIKVQYSGINYKDALATVKDSGVLKSYPMVPGIDLAGTVVESDDPTIEKGEEVIITGYDLGVNHYGGFSEYARVKSDWIVKCPENLTLEEAMIYGTAGYTAGLAIEKLEKANFMTLEGDKVLVRGASGGVGSLAVMMLNELGYKVVASTGNKKATNKLKELGAREVIDRISEDSNEILGKRTWQAAIDPCGGPGTPYIAKHLTNGGGVALIGMTGGNHFETSVFPFILRGVSVVGLDSVMTPMKLRQRVWRRLATDLKSDKLHEIKNTIAFKDLKHSIETVLNHENAGRIIIDFEA persistent 331 Acryloyl-CoA reductase WP_048680383.1 UPI0006604A42 UniRef100_UPI0006604A42,UniRef50_A0A2Y1TSU4,UniRef90_A0A8X8KJX9 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 73045 73899 . + . GCA_005502385.1_02114_gene GCA_005502385.1_02114 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKKLPTILLTSSLLLTACGHNNHDNANEKTSKKSTNENKVALQKAAKEYRKYTNEQLDQFLKGTEEFVSAIKADDIEKAKSLYPKVRMYYERSEPVAEAFGDLDPKIDARLADMKEEKKEDKWTGYHKIEKSLYQENKIDEMTKKDANQLLKDAKELDAKVDTLDITPKLMLQGSVDLLNEVSTSKITGEEEIYSHTDLYDFKANIEGAQKIYELFKSELEKKDKKLSSTIMDNFNKVNQLLDKYKNNDGYKDYSAVTKEDRKALSDAVNSLGEPLSKMAVVTE . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 73045 73899 . + . GCA_005502385.1_02114_mRNA GCA_005502385.1_02114 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKKLPTILLTSSLLLTACGHNNHDNANEKTSKKSTNENKVALQKAAKEYRKYTNEQLDQFLKGTEEFVSAIKADDIEKAKSLYPKVRMYYERSEPVAEAFGDLDPKIDARLADMKEEKKEDKWTGYHKIEKSLYQENKIDEMTKKDANQLLKDAKELDAKVDTLDITPKLMLQGSVDLLNEVSTSKITGEEEIYSHTDLYDFKANIEGAQKIYELFKSELEKKDKKLSSTIMDNFNKVNQLLDKYKNNDGYKDYSAVTKEDRKALSDAVNSLGEPLSKMAVVTE . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 73045 73899 . + 0 GCA_005502385.1_02114 GCA_005502385.1_02114_gene,GCA_005502385.1_02114_mRNA GCA_005502385.1_02114 putative iron uptake system component EfeM GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKKLPTILLTSSLLLTACGHNNHDNANEKTSKKSTNENKVALQKAAKEYRKYTNEQLDQFLKGTEEFVSAIKADDIEKAKSLYPKVRMYYERSEPVAEAFGDLDPKIDARLADMKEEKKEDKWTGYHKIEKSLYQENKIDEMTKKDANQLLKDAKELDAKVDTLDITPKLMLQGSVDLLNEVSTSKITGEEEIYSHTDLYDFKANIEGAQKIYELFKSELEKKDKKLSSTIMDNFNKVNQLLDKYKNNDGYKDYSAVTKEDRKALSDAVNSLGEPLSKMAVVTE persistent 284 efeO iron uptake system protein EfeO GO:0006826 WP_054105742.1 UPI0006B9AD79 UniRef100_UPI0006B9AD79,UniRef50_Q4L8N2,UniRef90_A0A8X8KI16 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 73896 75122 . + . GCA_005502385.1_02115_gene GCA_005502385.1_02115 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSNINHKNHPQMTRRSFLKLLGIGSAGAVIGASSVGSIFSFKSMFDTPESEENDSYEFYGHIQAGITTPTQKNCNFIALDLKSKDQTLIKDMFKKWTQMSVSMTDGTIIGENSNNTLLPPVDTGESIGLDASKLTLTYGVSKSFLKKIGLSSKIPFDFRDIPHFPNDQLDEEYSDGDIMIQACSNDPQVTFHAIHNLIRPFRDIIKIRWSQHGFISTKKNETPRNLMAFKDGTVNPRNNNDLKKYVFIDNGWAENGTYCIIRRIQIHIETWDRTALEEQEATFGRKRSTGAPLTGKKEFDNIDLKAKNNKGKYIIDENAHTRLAREVKTSIKRRAYNYNDGTNAKTGDLDTGLMFICFQKSIQQFIDIQNNLGHNDKLNEYITHRGSASFLVLPGIQKGGYIGEALFS . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 73896 75122 . + . GCA_005502385.1_02115_mRNA GCA_005502385.1_02115 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSNINHKNHPQMTRRSFLKLLGIGSAGAVIGASSVGSIFSFKSMFDTPESEENDSYEFYGHIQAGITTPTQKNCNFIALDLKSKDQTLIKDMFKKWTQMSVSMTDGTIIGENSNNTLLPPVDTGESIGLDASKLTLTYGVSKSFLKKIGLSSKIPFDFRDIPHFPNDQLDEEYSDGDIMIQACSNDPQVTFHAIHNLIRPFRDIIKIRWSQHGFISTKKNETPRNLMAFKDGTVNPRNNNDLKKYVFIDNGWAENGTYCIIRRIQIHIETWDRTALEEQEATFGRKRSTGAPLTGKKEFDNIDLKAKNNKGKYIIDENAHTRLAREVKTSIKRRAYNYNDGTNAKTGDLDTGLMFICFQKSIQQFIDIQNNLGHNDKLNEYITHRGSASFLVLPGIQKGGYIGEALFS . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 73896 75122 . + 0 GCA_005502385.1_02115 GCA_005502385.1_02115_gene,GCA_005502385.1_02115_mRNA GCA_005502385.1_02115 putative deferrochelatase/peroxidase EfeN GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSNINHKNHPQMTRRSFLKLLGIGSAGAVIGASSVGSIFSFKSMFDTPESEENDSYEFYGHIQAGITTPTQKNCNFIALDLKSKDQTLIKDMFKKWTQMSVSMTDGTIIGENSNNTLLPPVDTGESIGLDASKLTLTYGVSKSFLKKIGLSSKIPFDFRDIPHFPNDQLDEEYSDGDIMIQACSNDPQVTFHAIHNLIRPFRDIIKIRWSQHGFISTKKNETPRNLMAFKDGTVNPRNNNDLKKYVFIDNGWAENGTYCIIRRIQIHIETWDRTALEEQEATFGRKRSTGAPLTGKKEFDNIDLKAKNNKGKYIIDENAHTRLAREVKTSIKRRAYNYNDGTNAKTGDLDTGLMFICFQKSIQQFIDIQNNLGHNDKLNEYITHRGSASFLVLPGIQKGGYIGEALFS persistent 408 efeB iron uptake transporter deferrochelatase/peroxidase subunit 4.98.1.1 GO:0004601,GO:0020037,GO:0033212 WP_054105741.1 UPI0006B97A4D UniRef100_UPI0006B97A4D,UniRef50_A0A390V9S3,UniRef90_A0A8X8KH56 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 75103 76833 . + . GCA_005502385.1_02116_gene GCA_005502385.1_02116 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKHYLVKISIITLLIIITRLFSLTSVSVANDSQLNDAYVAISDAKSTLEHKQLNYNEKQNVLNEVKHKIMSLNIKENKKGKDVKSKLHMIDQATTTNKQIDSLSELTKSLIVYESSVSTDDIDKDIRNLKKQINAKDNIMQEAVKNKDRSKLQSINNMLNQIWKKHETAIRNYDENKYGQIEVYLMQLRVAIQKEPLDIKKVDNAWKTFKTSIDTVDKKQSNTEKNQYKVTQLNIELEKAIKGIESHQLKQSDEALTKFIQIWPYVEGKIQTKNSSLYTKIEDKIPYYQSILDSSNKDRIKESLIKINSEIKDAVSEDAYSSIDVMIIFLREGLEVLLIILTLTTMTRNVRDTKGTTSVIGDAILGLILSLALAFIFIQVLGNNGLLREGMEAALGIIAVVLMYIVGIWMHRRSSAKRWNDMIQQMYHHAISNRNLALLGTIGLISVLREGVEVIIFYMGMMGSIKTLDFVIGIILAIVILSIFTLLFKTVIRLIPIYFIFRVLSILIFIMAFKMLGISIQKLQLLGMITQHSIEHIPTLNIIGFYPSIETMSAQLIYILLIAYFTLKHTKTKHHI . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 75103 76833 . + . GCA_005502385.1_02116_mRNA GCA_005502385.1_02116 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKHYLVKISIITLLIIITRLFSLTSVSVANDSQLNDAYVAISDAKSTLEHKQLNYNEKQNVLNEVKHKIMSLNIKENKKGKDVKSKLHMIDQATTTNKQIDSLSELTKSLIVYESSVSTDDIDKDIRNLKKQINAKDNIMQEAVKNKDRSKLQSINNMLNQIWKKHETAIRNYDENKYGQIEVYLMQLRVAIQKEPLDIKKVDNAWKTFKTSIDTVDKKQSNTEKNQYKVTQLNIELEKAIKGIESHQLKQSDEALTKFIQIWPYVEGKIQTKNSSLYTKIEDKIPYYQSILDSSNKDRIKESLIKINSEIKDAVSEDAYSSIDVMIIFLREGLEVLLIILTLTTMTRNVRDTKGTTSVIGDAILGLILSLALAFIFIQVLGNNGLLREGMEAALGIIAVVLMYIVGIWMHRRSSAKRWNDMIQQMYHHAISNRNLALLGTIGLISVLREGVEVIIFYMGMMGSIKTLDFVIGIILAIVILSIFTLLFKTVIRLIPIYFIFRVLSILIFIMAFKMLGISIQKLQLLGMITQHSIEHIPTLNIIGFYPSIETMSAQLIYILLIAYFTLKHTKTKHHI . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 75103 76833 . + 0 GCA_005502385.1_02116 GCA_005502385.1_02116_gene,GCA_005502385.1_02116_mRNA GCA_005502385.1_02116 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKHYLVKISIITLLIIITRLFSLTSVSVANDSQLNDAYVAISDAKSTLEHKQLNYNEKQNVLNEVKHKIMSLNIKENKKGKDVKSKLHMIDQATTTNKQIDSLSELTKSLIVYESSVSTDDIDKDIRNLKKQINAKDNIMQEAVKNKDRSKLQSINNMLNQIWKKHETAIRNYDENKYGQIEVYLMQLRVAIQKEPLDIKKVDNAWKTFKTSIDTVDKKQSNTEKNQYKVTQLNIELEKAIKGIESHQLKQSDEALTKFIQIWPYVEGKIQTKNSSLYTKIEDKIPYYQSILDSSNKDRIKESLIKINSEIKDAVSEDAYSSIDVMIIFLREGLEVLLIILTLTTMTRNVRDTKGTTSVIGDAILGLILSLALAFIFIQVLGNNGLLREGMEAALGIIAVVLMYIVGIWMHRRSSAKRWNDMIQQMYHHAISNRNLALLGTIGLISVLREGVEVIIFYMGMMGSIKTLDFVIGIILAIVILSIFTLLFKTVIRLIPIYFIFRVLSILIFIMAFKMLGISIQKLQLLGMITQHSIEHIPTLNIIGFYPSIETMSAQLIYILLIAYFTLKHTKTKHHI persistent 576 FTR1 family iron permease UniRef50_A0A4Z1BRH1,UniRef90_A0A974KXR5 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 76904 77659 . - . GCA_005502385.1_02117_gene GCA_005502385.1_02117 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MRWRKHPVNILNNSETNQTSSTLLEHFEELRRRLINILISFLITLPLVYISSKWWITTFVYHIKRTQVVLHTFSFTEMIQIYILIISFVTLCLVLPIIFYQLWAFISPGLHRRERFFIYKYSLLCTALFIIGVGFAYTIGFPLIIKFSLTLSKTMYIQPVIGFNAYLHELIRWLFIFGVVFQLPMFCMGLVKMDVIDIKQLHQYRKYIYFTCFIIASILAPPDITLNLFLTLPLIILFEISILLTKITTRH . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 76904 77659 . - . GCA_005502385.1_02117_mRNA GCA_005502385.1_02117 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MRWRKHPVNILNNSETNQTSSTLLEHFEELRRRLINILISFLITLPLVYISSKWWITTFVYHIKRTQVVLHTFSFTEMIQIYILIISFVTLCLVLPIIFYQLWAFISPGLHRRERFFIYKYSLLCTALFIIGVGFAYTIGFPLIIKFSLTLSKTMYIQPVIGFNAYLHELIRWLFIFGVVFQLPMFCMGLVKMDVIDIKQLHQYRKYIYFTCFIIASILAPPDITLNLFLTLPLIILFEISILLTKITTRH . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 76904 77659 . - 0 GCA_005502385.1_02117 GCA_005502385.1_02117_gene,GCA_005502385.1_02117_mRNA GCA_005502385.1_02117 Sec-independent protein translocase protein TatCy GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MRWRKHPVNILNNSETNQTSSTLLEHFEELRRRLINILISFLITLPLVYISSKWWITTFVYHIKRTQVVLHTFSFTEMIQIYILIISFVTLCLVLPIIFYQLWAFISPGLHRRERFFIYKYSLLCTALFIIGVGFAYTIGFPLIIKFSLTLSKTMYIQPVIGFNAYLHELIRWLFIFGVVFQLPMFCMGLVKMDVIDIKQLHQYRKYIYFTCFIIASILAPPDITLNLFLTLPLIILFEISILLTKITTRH persistent 251 tatC twin-arginine translocase subunit TatC GO:0005886,GO:0015628 WP_228777652.1 UPI001E437286 UniRef100_UPI001E437286,UniRef50_A0A2S6D619,UniRef90_A0A3S7GWJ0 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 77601 77825 . - . GCA_005502385.1_02118_gene GCA_005502385.1_02118 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MFHELFILGIAGPTSLVIISIVALIIFGPKKLPQFGKAIGSTLREFKSAAEHIDSDEVEETPSKHSKQQRDKSN . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 77601 77825 . - . GCA_005502385.1_02118_mRNA GCA_005502385.1_02118 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MFHELFILGIAGPTSLVIISIVALIIFGPKKLPQFGKAIGSTLREFKSAAEHIDSDEVEETPSKHSKQQRDKSN . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 77601 77825 . - 0 GCA_005502385.1_02118 GCA_005502385.1_02118_gene,GCA_005502385.1_02118_mRNA GCA_005502385.1_02118 Sec-independent protein translocase protein TatA GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MFHELFILGIAGPTSLVIISIVALIIFGPKKLPQFGKAIGSTLREFKSAAEHIDSDEVEETPSKHSKQQRDKSN persistent 74 tatA Sec-independent protein translocase protein TatA WP_017174935.1 UPI0002F15DEF UniRef100_A0A2A1M9H1,UniRef50_A0A380FX86,UniRef90_A0A2A1M9H1 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 78002 78517 . + . GCA_005502385.1_02119_gene GCA_005502385.1_02119 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKEKIEEIKKDNVSELRKIAEKTFYDTFKGSYTDENFKKFFKENYNETKLLSEIEHHQSFHYFYKVDDEIAGYLKLNINETQTEPKGNQYLEIQRIYFDKDYQGGGRGSQFIQLAIDKAREYNKSKIWLGVWENNPSAISFYKKQGFEITGQHDFINGNVIDTDLIMEKEI . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 78002 78517 . + . GCA_005502385.1_02119_mRNA GCA_005502385.1_02119 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKEKIEEIKKDNVSELRKIAEKTFYDTFKGSYTDENFKKFFKENYNETKLLSEIEHHQSFHYFYKVDDEIAGYLKLNINETQTEPKGNQYLEIQRIYFDKDYQGGGRGSQFIQLAIDKAREYNKSKIWLGVWENNPSAISFYKKQGFEITGQHDFINGNVIDTDLIMEKEI . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 78002 78517 . + 0 GCA_005502385.1_02119 GCA_005502385.1_02119_gene,GCA_005502385.1_02119_mRNA GCA_005502385.1_02119 Spermidine/spermine N(1)-acetyltransferase GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKEKIEEIKKDNVSELRKIAEKTFYDTFKGSYTDENFKKFFKENYNETKLLSEIEHHQSFHYFYKVDDEIAGYLKLNINETQTEPKGNQYLEIQRIYFDKDYQGGGRGSQFIQLAIDKAREYNKSKIWLGVWENNPSAISFYKKQGFEITGQHDFINGNVIDTDLIMEKEI persistent 171 N-acetyltransferase WP_137689700.1 UPI0010F55211 UniRef100_UPI0010F55211,UniRef50_A0A380FYV1,UniRef90_A0A974KXU1 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 78573 80258 . - . GCA_005502385.1_02120_gene GCA_005502385.1_02120 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIKQINISNMAHLDIQLNKAKSAGYSHFIPYSNEIKINQDMLNAVPLGEHSIAVDYTIHGVYLNDCRYFGNDKLSFLAWMNNINHYPNIIYNIDTALIYLSKYQIQSIMDLAVITILKNEIDIDGHVVFDFIEELQTSSSFWNSLDTREIKIANHFDLNKLAYIHGHLIPFPKYKHPLADETLRFADSWLVTTKFKLPKWMYNKIHQRAIQNHKKLSYIYTKDTSKLKNHVVFLGFDYGYRGNSKYLFNYFVKRNPTTEAYYITDDRRGPYFLPIDAEHNKELIETAKIVVIESYMPEAYQPNGTVIQLWHGTPIKELFLDSKEPYQNQTIYNYRARKYNKWKHQSYVLLDSKASEGLFETAFPNETVQFLPFGYPRVSYLLNYKDNQNQQRKIREKLKLNHTKPVLLYAPTWHKNTESFTPLTMTPELLEKYYVIYKGHIEGDDAIPEGVIEAPMDIETQDLILVSDIVLTDYSSIIFDALTIDKKVCLYTPNHEEYKEERGVYIDVLNSLAKVWYTDEELLLNHLIHDRIPTIHQHALINRNNQSLKKLTQLMRDILDK . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 78573 80258 . - . GCA_005502385.1_02120_mRNA GCA_005502385.1_02120 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIKQINISNMAHLDIQLNKAKSAGYSHFIPYSNEIKINQDMLNAVPLGEHSIAVDYTIHGVYLNDCRYFGNDKLSFLAWMNNINHYPNIIYNIDTALIYLSKYQIQSIMDLAVITILKNEIDIDGHVVFDFIEELQTSSSFWNSLDTREIKIANHFDLNKLAYIHGHLIPFPKYKHPLADETLRFADSWLVTTKFKLPKWMYNKIHQRAIQNHKKLSYIYTKDTSKLKNHVVFLGFDYGYRGNSKYLFNYFVKRNPTTEAYYITDDRRGPYFLPIDAEHNKELIETAKIVVIESYMPEAYQPNGTVIQLWHGTPIKELFLDSKEPYQNQTIYNYRARKYNKWKHQSYVLLDSKASEGLFETAFPNETVQFLPFGYPRVSYLLNYKDNQNQQRKIREKLKLNHTKPVLLYAPTWHKNTESFTPLTMTPELLEKYYVIYKGHIEGDDAIPEGVIEAPMDIETQDLILVSDIVLTDYSSIIFDALTIDKKVCLYTPNHEEYKEERGVYIDVLNSLAKVWYTDEELLLNHLIHDRIPTIHQHALINRNNQSLKKLTQLMRDILDK . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 78573 80258 . - 0 GCA_005502385.1_02120 GCA_005502385.1_02120_gene,GCA_005502385.1_02120_mRNA GCA_005502385.1_02120 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIKQINISNMAHLDIQLNKAKSAGYSHFIPYSNEIKINQDMLNAVPLGEHSIAVDYTIHGVYLNDCRYFGNDKLSFLAWMNNINHYPNIIYNIDTALIYLSKYQIQSIMDLAVITILKNEIDIDGHVVFDFIEELQTSSSFWNSLDTREIKIANHFDLNKLAYIHGHLIPFPKYKHPLADETLRFADSWLVTTKFKLPKWMYNKIHQRAIQNHKKLSYIYTKDTSKLKNHVVFLGFDYGYRGNSKYLFNYFVKRNPTTEAYYITDDRRGPYFLPIDAEHNKELIETAKIVVIESYMPEAYQPNGTVIQLWHGTPIKELFLDSKEPYQNQTIYNYRARKYNKWKHQSYVLLDSKASEGLFETAFPNETVQFLPFGYPRVSYLLNYKDNQNQQRKIREKLKLNHTKPVLLYAPTWHKNTESFTPLTMTPELLEKYYVIYKGHIEGDDAIPEGVIEAPMDIETQDLILVSDIVLTDYSSIIFDALTIDKKVCLYTPNHEEYKEERGVYIDVLNSLAKVWYTDEELLLNHLIHDRIPTIHQHALINRNNQSLKKLTQLMRDILDK persistent 561 Teichoic acid biosynthesis protein F UniRef50_A0A0H2VI21,UniRef90_A0A6N0I234 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 80614 82215 . + . GCA_005502385.1_02121_gene GCA_005502385.1_02121 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MLVHSFNPFGNLVLSSLIAAIPIILFLLCLTVFKMKGIYAAITTLVVTLLIAIPFFKLPGGIATGGVIEGFYQGIIPIGYIVIMAVLLYKTTQESGQFSTIQDSIMSISQDQRIQLLLIGFAFNGFLEGAAGFGVPIAICALLLAQLGFKPLQAAMLCLIANAASGAFGAIGIPVGIVNTLHLPGHVQAMAVSQTSTLTLAIINFIIPFLLIFIIDGFKGIKETLPQILVASITFTVLQGLITVFVGPELADIIPPLVTMGVLAVFSKKVQPKNIFRIQKDVKPEAVKPHSGKEILYAWSPFIILTVIVMIWSATFFKNLFAPNGPLSALVFNFNLPGTYSDVTHKPIMLTFNFIGQTGTAILLTIIITVLMSKKVSFGDAGRLFVEAFKELWLPIVTICFILAISKITTYGGLSAAMGQGIAKAGGVFPILSPVLGWIGVFMTGSVVNNNSLFAPIQASVAQQIGTSAPLLVAANTVGGVAAKLISPQSIAIATAAVKQVGKESELLKMTLKYSIGLLIFICIWTFILSIFM . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 80614 82215 . + . GCA_005502385.1_02121_mRNA GCA_005502385.1_02121 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MLVHSFNPFGNLVLSSLIAAIPIILFLLCLTVFKMKGIYAAITTLVVTLLIAIPFFKLPGGIATGGVIEGFYQGIIPIGYIVIMAVLLYKTTQESGQFSTIQDSIMSISQDQRIQLLLIGFAFNGFLEGAAGFGVPIAICALLLAQLGFKPLQAAMLCLIANAASGAFGAIGIPVGIVNTLHLPGHVQAMAVSQTSTLTLAIINFIIPFLLIFIIDGFKGIKETLPQILVASITFTVLQGLITVFVGPELADIIPPLVTMGVLAVFSKKVQPKNIFRIQKDVKPEAVKPHSGKEILYAWSPFIILTVIVMIWSATFFKNLFAPNGPLSALVFNFNLPGTYSDVTHKPIMLTFNFIGQTGTAILLTIIITVLMSKKVSFGDAGRLFVEAFKELWLPIVTICFILAISKITTYGGLSAAMGQGIAKAGGVFPILSPVLGWIGVFMTGSVVNNNSLFAPIQASVAQQIGTSAPLLVAANTVGGVAAKLISPQSIAIATAAVKQVGKESELLKMTLKYSIGLLIFICIWTFILSIFM . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 80614 82215 . + 0 GCA_005502385.1_02121 GCA_005502385.1_02121_gene,GCA_005502385.1_02121_mRNA GCA_005502385.1_02121 L-lactate permease GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MLVHSFNPFGNLVLSSLIAAIPIILFLLCLTVFKMKGIYAAITTLVVTLLIAIPFFKLPGGIATGGVIEGFYQGIIPIGYIVIMAVLLYKTTQESGQFSTIQDSIMSISQDQRIQLLLIGFAFNGFLEGAAGFGVPIAICALLLAQLGFKPLQAAMLCLIANAASGAFGAIGIPVGIVNTLHLPGHVQAMAVSQTSTLTLAIINFIIPFLLIFIIDGFKGIKETLPQILVASITFTVLQGLITVFVGPELADIIPPLVTMGVLAVFSKKVQPKNIFRIQKDVKPEAVKPHSGKEILYAWSPFIILTVIVMIWSATFFKNLFAPNGPLSALVFNFNLPGTYSDVTHKPIMLTFNFIGQTGTAILLTIIITVLMSKKVSFGDAGRLFVEAFKELWLPIVTICFILAISKITTYGGLSAAMGQGIAKAGGVFPILSPVLGWIGVFMTGSVVNNNSLFAPIQASVAQQIGTSAPLLVAANTVGGVAAKLISPQSIAIATAAVKQVGKESELLKMTLKYSIGLLIFICIWTFILSIFM persistent 533 L-lactate permease WP_048680371.1 UPI0006605919 UniRef100_UPI0006605919,UniRef50_Q9K5Z9,UniRef90_A0A657M464 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 82265 83410 . - . GCA_005502385.1_02122_gene GCA_005502385.1_02122 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKSFTFLMHNIYALGGTVKAMTELANTLADKGHNVKIISIFRAKDKPYFKLNSSIKIKHLVDYRLKPQNVISIFMNRLNKYTPLLKPIYLSKHEPGLNQFSKYIEHKLIRAINDIDTDVLIGTRASFNIFISKYYHGHAMTIGMEHMNLNAYPKAYRQEILDAYQHLDALTTLTHTDKDHYESFIKTPVYVVPNIIRTKKLNLPKKNIILSAGRLEYEKGYDILIESVQLIKDTLRQKKYKIEIYGEGQEHQHLQETINHHHLNDLITIHPATQHLNEKLAQSRMTVVPSRNEGFGMVILEAMAQDNIVISFKDTLGPSQLIQHNKNGYLADYENAQSLAKYIDLAIQKKEHSENMIKSSHRTLEHYSPDKIYDYFYSIFK . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 82265 83410 . - . GCA_005502385.1_02122_mRNA GCA_005502385.1_02122 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKSFTFLMHNIYALGGTVKAMTELANTLADKGHNVKIISIFRAKDKPYFKLNSSIKIKHLVDYRLKPQNVISIFMNRLNKYTPLLKPIYLSKHEPGLNQFSKYIEHKLIRAINDIDTDVLIGTRASFNIFISKYYHGHAMTIGMEHMNLNAYPKAYRQEILDAYQHLDALTTLTHTDKDHYESFIKTPVYVVPNIIRTKKLNLPKKNIILSAGRLEYEKGYDILIESVQLIKDTLRQKKYKIEIYGEGQEHQHLQETINHHHLNDLITIHPATQHLNEKLAQSRMTVVPSRNEGFGMVILEAMAQDNIVISFKDTLGPSQLIQHNKNGYLADYENAQSLAKYIDLAIQKKEHSENMIKSSHRTLEHYSPDKIYDYFYSIFK . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 82265 83410 . - 0 GCA_005502385.1_02122 GCA_005502385.1_02122_gene,GCA_005502385.1_02122_mRNA GCA_005502385.1_02122 GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-diNAcBac-PP-undecaprenol alpha-1%2C4-N-acetyl-D-galactosaminyltransferase GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKSFTFLMHNIYALGGTVKAMTELANTLADKGHNVKIISIFRAKDKPYFKLNSSIKIKHLVDYRLKPQNVISIFMNRLNKYTPLLKPIYLSKHEPGLNQFSKYIEHKLIRAINDIDTDVLIGTRASFNIFISKYYHGHAMTIGMEHMNLNAYPKAYRQEILDAYQHLDALTTLTHTDKDHYESFIKTPVYVVPNIIRTKKLNLPKKNIILSAGRLEYEKGYDILIESVQLIKDTLRQKKYKIEIYGEGQEHQHLQETINHHHLNDLITIHPATQHLNEKLAQSRMTVVPSRNEGFGMVILEAMAQDNIVISFKDTLGPSQLIQHNKNGYLADYENAQSLAKYIDLAIQKKEHSENMIKSSHRTLEHYSPDKIYDYFYSIFK persistent 381 Glycoside hydrolase UniRef50_A0A0H2VJ62,UniRef90_A0AAE5JN83 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 83721 85199 . + . GCA_005502385.1_02123_gene GCA_005502385.1_02123 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSIEHSKTDVILIGGGIMSATLGTLLKDLSPEKEIKIFEKLEQSGEESSNVWNNAGTGHSALCELNYTKENKDGSIDVTKAIKINEQFQVSKQFWAYLVRTGQLEHPGNFIQSVPHMSFVKGILNVDFLKKRVKALKENILFQKMEITEDRDQIDEWVPLMVEGRTSPVPIALSRDETGTDVNFGALTKKLISNLKERNVDVTYHQEVQNIERLNNGYWKVTVKDLNSNTIHTFESEFVFIGAGGASLPLLQKTGIKQSKHVGGFPVSGLFLRCKNEDVIERHYAKVYGKADVGAPPMSVPHLDTRFVNGERSLLFGPFAGFSPKFLKTGSNLDLIRSVKPNNIVTMLTAGVKEFNLTKYLVSQLMLSHKDRMNDLRIFLPNARDEDWEVVIAGQRVQVIKDTEDSKGNLQFGTEVITSDDGSLAALLGASPGASTAVDIMLDVLKRCYKNEFDAWIPKIKEMIPSYGLKLNEHEEVYNAVNKEVRKYLNVK . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 83721 85199 . + . GCA_005502385.1_02123_mRNA GCA_005502385.1_02123 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSIEHSKTDVILIGGGIMSATLGTLLKDLSPEKEIKIFEKLEQSGEESSNVWNNAGTGHSALCELNYTKENKDGSIDVTKAIKINEQFQVSKQFWAYLVRTGQLEHPGNFIQSVPHMSFVKGILNVDFLKKRVKALKENILFQKMEITEDRDQIDEWVPLMVEGRTSPVPIALSRDETGTDVNFGALTKKLISNLKERNVDVTYHQEVQNIERLNNGYWKVTVKDLNSNTIHTFESEFVFIGAGGASLPLLQKTGIKQSKHVGGFPVSGLFLRCKNEDVIERHYAKVYGKADVGAPPMSVPHLDTRFVNGERSLLFGPFAGFSPKFLKTGSNLDLIRSVKPNNIVTMLTAGVKEFNLTKYLVSQLMLSHKDRMNDLRIFLPNARDEDWEVVIAGQRVQVIKDTEDSKGNLQFGTEVITSDDGSLAALLGASPGASTAVDIMLDVLKRCYKNEFDAWIPKIKEMIPSYGLKLNEHEEVYNAVNKEVRKYLNVK . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 83721 85199 . + 0 GCA_005502385.1_02123 GCA_005502385.1_02123_gene,GCA_005502385.1_02123_mRNA GCA_005502385.1_02123 putative malate:quinone oxidoreductase 1 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSIEHSKTDVILIGGGIMSATLGTLLKDLSPEKEIKIFEKLEQSGEESSNVWNNAGTGHSALCELNYTKENKDGSIDVTKAIKINEQFQVSKQFWAYLVRTGQLEHPGNFIQSVPHMSFVKGILNVDFLKKRVKALKENILFQKMEITEDRDQIDEWVPLMVEGRTSPVPIALSRDETGTDVNFGALTKKLISNLKERNVDVTYHQEVQNIERLNNGYWKVTVKDLNSNTIHTFESEFVFIGAGGASLPLLQKTGIKQSKHVGGFPVSGLFLRCKNEDVIERHYAKVYGKADVGAPPMSVPHLDTRFVNGERSLLFGPFAGFSPKFLKTGSNLDLIRSVKPNNIVTMLTAGVKEFNLTKYLVSQLMLSHKDRMNDLRIFLPNARDEDWEVVIAGQRVQVIKDTEDSKGNLQFGTEVITSDDGSLAALLGASPGASTAVDIMLDVLKRCYKNEFDAWIPKIKEMIPSYGLKLNEHEEVYNAVNKEVRKYLNVK persistent 492 mqo malate dehydrogenase (quinone) 1.1.5.4 GO:0006099,GO:0008924 WP_019834773.1 UPI0003730D1E UniRef100_UPI0003730D1E,UniRef50_C5DAE0,UniRef90_A0A8X8GJU9 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 85251 86624 . - . GCA_005502385.1_02124_gene GCA_005502385.1_02124 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MFKTLYSRIAIYTITVIIFSALVSFFIANIYYHFNLKENNDTKIMRTLKEARTYEHQLPSKYVKSYFQHLGQMNYQIVTVDKQGQKTFYGEPFRKDTLSSSSINQVMRGHDYHGIKNKPFELFVTGFFDNETDNTVGIRFYEDHEPIAVFMRPDIGKTFGEFRIFLFVLLIFLLLISISLVIASTYSIIKPIKKLKLATEQLMNGNFETPISRTRHDEIGTLQFRFDTMRQSLKQLDDMRQHFVQNVSHEIKTPLTHIERLLTELQSAHSEDERHSLINDIHLEITRLSNLIKELLLLSELDNANHLSVDDKLELSSLITDIIRHEQYTIDDKSLMLLSDMHNIYFQGNRRLLHQAFSNLIQNAIKYSDINGIIDITLNQENNHIMFAVTNEGQTISKQAIPHLFDRFYKLNASDNSNGLGLAITKSIIDLHHGKICVSSDSKNGTTFKILFPHILF . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 85251 86624 . - . GCA_005502385.1_02124_mRNA GCA_005502385.1_02124 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MFKTLYSRIAIYTITVIIFSALVSFFIANIYYHFNLKENNDTKIMRTLKEARTYEHQLPSKYVKSYFQHLGQMNYQIVTVDKQGQKTFYGEPFRKDTLSSSSINQVMRGHDYHGIKNKPFELFVTGFFDNETDNTVGIRFYEDHEPIAVFMRPDIGKTFGEFRIFLFVLLIFLLLISISLVIASTYSIIKPIKKLKLATEQLMNGNFETPISRTRHDEIGTLQFRFDTMRQSLKQLDDMRQHFVQNVSHEIKTPLTHIERLLTELQSAHSEDERHSLINDIHLEITRLSNLIKELLLLSELDNANHLSVDDKLELSSLITDIIRHEQYTIDDKSLMLLSDMHNIYFQGNRRLLHQAFSNLIQNAIKYSDINGIIDITLNQENNHIMFAVTNEGQTISKQAIPHLFDRFYKLNASDNSNGLGLAITKSIIDLHHGKICVSSDSKNGTTFKILFPHILF . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 85251 86624 . - 0 GCA_005502385.1_02124 GCA_005502385.1_02124_gene,GCA_005502385.1_02124_mRNA GCA_005502385.1_02124 Heme sensor protein HssS GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MFKTLYSRIAIYTITVIIFSALVSFFIANIYYHFNLKENNDTKIMRTLKEARTYEHQLPSKYVKSYFQHLGQMNYQIVTVDKQGQKTFYGEPFRKDTLSSSSINQVMRGHDYHGIKNKPFELFVTGFFDNETDNTVGIRFYEDHEPIAVFMRPDIGKTFGEFRIFLFVLLIFLLLISISLVIASTYSIIKPIKKLKLATEQLMNGNFETPISRTRHDEIGTLQFRFDTMRQSLKQLDDMRQHFVQNVSHEIKTPLTHIERLLTELQSAHSEDERHSLINDIHLEITRLSNLIKELLLLSELDNANHLSVDDKLELSSLITDIIRHEQYTIDDKSLMLLSDMHNIYFQGNRRLLHQAFSNLIQNAIKYSDINGIIDITLNQENNHIMFAVTNEGQTISKQAIPHLFDRFYKLNASDNSNGLGLAITKSIIDLHHGKICVSSDSKNGTTFKILFPHILF persistent 457 hssS Heme sensor protein HssS WP_137689703.1 UPI0010F45D52 UniRef100_UPI0010F45D52,UniRef50_Q2FVQ8,UniRef90_A0A3S7GW49 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 86617 87291 . - . GCA_005502385.1_02125_gene GCA_005502385.1_02125 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIKCLIVDDDPKLLHYVSKHLEADHIKTVTHSSGEQALKYLNHHLVDIAVVDIMMTGMDGFELCQLLKDRYQLPVIMLTARDALSDKERAFVSGTDDYVTKPFEIKELLFRIRAVLRRYQINIQNKIEIGNVSLNDEFMEVSVESKKMNLPTKEFQLLFLLCTHPRQIFTRESIIEKIWGLDYTGDERTIDVHIKRLRARLKKLEATIEIQTVRGQGYKVNKDV . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 86617 87291 . - . GCA_005502385.1_02125_mRNA GCA_005502385.1_02125 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIKCLIVDDDPKLLHYVSKHLEADHIKTVTHSSGEQALKYLNHHLVDIAVVDIMMTGMDGFELCQLLKDRYQLPVIMLTARDALSDKERAFVSGTDDYVTKPFEIKELLFRIRAVLRRYQINIQNKIEIGNVSLNDEFMEVSVESKKMNLPTKEFQLLFLLCTHPRQIFTRESIIEKIWGLDYTGDERTIDVHIKRLRARLKKLEATIEIQTVRGQGYKVNKDV . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 86617 87291 . - 0 GCA_005502385.1_02125 GCA_005502385.1_02125_gene,GCA_005502385.1_02125_mRNA GCA_005502385.1_02125 Heme response regulator HssR GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIKCLIVDDDPKLLHYVSKHLEADHIKTVTHSSGEQALKYLNHHLVDIAVVDIMMTGMDGFELCQLLKDRYQLPVIMLTARDALSDKERAFVSGTDDYVTKPFEIKELLFRIRAVLRRYQINIQNKIEIGNVSLNDEFMEVSVESKKMNLPTKEFQLLFLLCTHPRQIFTRESIIEKIWGLDYTGDERTIDVHIKRLRARLKKLEATIEIQTVRGQGYKVNKDV persistent 224 hssR Heme response regulator HssR WP_019834775.1 UPI00036A9182 UniRef100_UPI00036A9182,UniRef50_Q2FVQ9,UniRef90_A0A974KZT6 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 87422 88477 . + . GCA_005502385.1_02126_gene GCA_005502385.1_02126 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNLAWKEIKFYKFRYILIMLIIFLLGSMVLFINGLAQGLARENVSFLNNQNAQTYIIEKMKEPKIEKSQLDSNQQNKIEDIINQQATHLGPQTLKLKQQDQDILTFSTSKEGRPSLKEGRYPNHSHEVAINDKLTGQDVKKGDTIKFKGHKEDYKVSGIIEDTMYSHNSMVMMNHSDFKALNKNYSTFYPVKELSKKDKNRINDISNVTTVNEKTLTDNIASYQAEQMPLNLMIISLFVITAIVLSAFFYVMTIQKISQIGILKAVGIKTRHLLSSLIIEIILTTMVGVILATILILILSLIMPVTMPFYLGYGTILLMIVIFLIVGCIGALLSFIKVLKVDPIDAIGGME . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 87422 88477 . + . GCA_005502385.1_02126_mRNA GCA_005502385.1_02126 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNLAWKEIKFYKFRYILIMLIIFLLGSMVLFINGLAQGLARENVSFLNNQNAQTYIIEKMKEPKIEKSQLDSNQQNKIEDIINQQATHLGPQTLKLKQQDQDILTFSTSKEGRPSLKEGRYPNHSHEVAINDKLTGQDVKKGDTIKFKGHKEDYKVSGIIEDTMYSHNSMVMMNHSDFKALNKNYSTFYPVKELSKKDKNRINDISNVTTVNEKTLTDNIASYQAEQMPLNLMIISLFVITAIVLSAFFYVMTIQKISQIGILKAVGIKTRHLLSSLIIEIILTTMVGVILATILILILSLIMPVTMPFYLGYGTILLMIVIFLIVGCIGALLSFIKVLKVDPIDAIGGME . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 87422 88477 . + 0 GCA_005502385.1_02126 GCA_005502385.1_02126_gene,GCA_005502385.1_02126_mRNA GCA_005502385.1_02126 putative ABC transporter permease GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNLAWKEIKFYKFRYILIMLIIFLLGSMVLFINGLAQGLARENVSFLNNQNAQTYIIEKMKEPKIEKSQLDSNQQNKIEDIINQQATHLGPQTLKLKQQDQDILTFSTSKEGRPSLKEGRYPNHSHEVAINDKLTGQDVKKGDTIKFKGHKEDYKVSGIIEDTMYSHNSMVMMNHSDFKALNKNYSTFYPVKELSKKDKNRINDISNVTTVNEKTLTDNIASYQAEQMPLNLMIISLFVITAIVLSAFFYVMTIQKISQIGILKAVGIKTRHLLSSLIIEIILTTMVGVILATILILILSLIMPVTMPFYLGYGTILLMIVIFLIVGCIGALLSFIKVLKVDPIDAIGGME persistent 351 hrtB Putative hemin transport system permease protein HrtB UniRef50_Q4L8L8,UniRef90_A0A8X8GHC2 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 88477 89142 . + . GCA_005502385.1_02127_gene GCA_005502385.1_02127 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTLKLEHISKTFGEGLAKTNVLKDINLEVQPGEFIILNGASGSGKSTLLNILGGLLTPTDGKILYEGHDLYSNYKNSTELRLNDIGFIFQASHLVPYLTVEEQLTVIAKEAGVNKKEAASNAKYLLTEIGLKDRLNAFLHMLSGGEKQRVAIMRAFTNNPKIILADEPTASLDASRATKVVEMIRERIKSEQMVGIMITHDERLFDYADRVVKLEDGKILN . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 88477 89142 . + . GCA_005502385.1_02127_mRNA GCA_005502385.1_02127 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTLKLEHISKTFGEGLAKTNVLKDINLEVQPGEFIILNGASGSGKSTLLNILGGLLTPTDGKILYEGHDLYSNYKNSTELRLNDIGFIFQASHLVPYLTVEEQLTVIAKEAGVNKKEAASNAKYLLTEIGLKDRLNAFLHMLSGGEKQRVAIMRAFTNNPKIILADEPTASLDASRATKVVEMIRERIKSEQMVGIMITHDERLFDYADRVVKLEDGKILN . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 88477 89142 . + 0 GCA_005502385.1_02127 GCA_005502385.1_02127_gene,GCA_005502385.1_02127_mRNA GCA_005502385.1_02127 Putative hemin import ATP-binding protein HrtA GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTLKLEHISKTFGEGLAKTNVLKDINLEVQPGEFIILNGASGSGKSTLLNILGGLLTPTDGKILYEGHDLYSNYKNSTELRLNDIGFIFQASHLVPYLTVEEQLTVIAKEAGVNKKEAASNAKYLLTEIGLKDRLNAFLHMLSGGEKQRVAIMRAFTNNPKIILADEPTASLDASRATKVVEMIRERIKSEQMVGIMITHDERLFDYADRVVKLEDGKILN persistent 221 hrtA Putative hemin import ATP-binding protein HrtA UniRef50_Q99RR8,UniRef90_A0A3S7GWK2 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 89212 90168 . - . GCA_005502385.1_02128_gene GCA_005502385.1_02128 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MLAIILLFIVLIIILSVLFNIRHFISLSFFITSVILCFTINLINIMTMTLPTGLFILIIISTIGLLVKHSHLFKIKKGTRFLNKMFRRLINGVLFIGIFIYLSTIPLSILNGMFLWIALILFSACYTFIIYLIFSSAFGRAKTHKQYDVILILGAGIFTETVTPMLASRLDRALKIYKVQSHNCNILVSGGQGPDEPISEALAMKNYLMKCGVSSSSILMESQSSSTYENFLYSKSFINTSFENVPNILCVTSQFHILRALRLAQKLNINIIGLGSSTPYHFLDKALLRDFLALMYQYKLLLTLYLVGLFIVSIWILL . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 89212 90168 . - . GCA_005502385.1_02128_mRNA GCA_005502385.1_02128 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MLAIILLFIVLIIILSVLFNIRHFISLSFFITSVILCFTINLINIMTMTLPTGLFILIIISTIGLLVKHSHLFKIKKGTRFLNKMFRRLINGVLFIGIFIYLSTIPLSILNGMFLWIALILFSACYTFIIYLIFSSAFGRAKTHKQYDVILILGAGIFTETVTPMLASRLDRALKIYKVQSHNCNILVSGGQGPDEPISEALAMKNYLMKCGVSSSSILMESQSSSTYENFLYSKSFINTSFENVPNILCVTSQFHILRALRLAQKLNINIIGLGSSTPYHFLDKALLRDFLALMYQYKLLLTLYLVGLFIVSIWILL . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 89212 90168 . - 0 GCA_005502385.1_02128 GCA_005502385.1_02128_gene,GCA_005502385.1_02128_mRNA GCA_005502385.1_02128 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MLAIILLFIVLIIILSVLFNIRHFISLSFFITSVILCFTINLINIMTMTLPTGLFILIIISTIGLLVKHSHLFKIKKGTRFLNKMFRRLINGVLFIGIFIYLSTIPLSILNGMFLWIALILFSACYTFIIYLIFSSAFGRAKTHKQYDVILILGAGIFTETVTPMLASRLDRALKIYKVQSHNCNILVSGGQGPDEPISEALAMKNYLMKCGVSSSSILMESQSSSTYENFLYSKSFINTSFENVPNILCVTSQFHILRALRLAQKLNINIIGLGSSTPYHFLDKALLRDFLALMYQYKLLLTLYLVGLFIVSIWILL persistent 318 DUF218 domain-containing protein WP_019834777.1 UPI00035C892F UniRef100_A0A8I1BGX3,UniRef50_A0A853V4F9,UniRef90_A0AAE5MZD6 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 90340 90801 . + . GCA_005502385.1_02129_gene GCA_005502385.1_02129 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNRISKNHIEFMKHFIDDTNTLTSKLLKDQQVKYGVSTEQSNVLRLLSHHQALSITEITEKQGVNKAAVSRRIKKLIESDFVALQKPNDKIDQRLKYIVLTEKGRQYTEENNEIISQIVNDMVKDLSSSDIEKALSVLYIIDERVKQFNAKVK . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 90340 90801 . + . GCA_005502385.1_02129_mRNA GCA_005502385.1_02129 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNRISKNHIEFMKHFIDDTNTLTSKLLKDQQVKYGVSTEQSNVLRLLSHHQALSITEITEKQGVNKAAVSRRIKKLIESDFVALQKPNDKIDQRLKYIVLTEKGRQYTEENNEIISQIVNDMVKDLSSSDIEKALSVLYIIDERVKQFNAKVK . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 90340 90801 . + 0 GCA_005502385.1_02129 GCA_005502385.1_02129_gene,GCA_005502385.1_02129_mRNA GCA_005502385.1_02129 HTH-type transcriptional regulator TcaR GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNRISKNHIEFMKHFIDDTNTLTSKLLKDQQVKYGVSTEQSNVLRLLSHHQALSITEITEKQGVNKAAVSRRIKKLIESDFVALQKPNDKIDQRLKYIVLTEKGRQYTEENNEIISQIVNDMVKDLSSSDIEKALSVLYIIDERVKQFNAKVK persistent 153 marR MarR family transcriptional regulator WP_017174925.1 UPI0002D82D01 UniRef100_A0A8X8KI11,UniRef50_Q9F4G3,UniRef90_A0A8X8KI11 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 90901 92265 . + . GCA_005502385.1_02130_gene GCA_005502385.1_02130 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKQCPYCGQELNKSDKQCSNCGNMIPKEKNKATSSSQSEQSNLKFKKFIPWVIIAFIVVLIGIVFILLRNFNSPEAQTKILVNAIDNNDAQKVATLISTKDVPVDDEEASVYIQYIKDEVGMMKFIHDVKHTTDKLNKSNHDSAYIQTKTDKNVLKISKNGMRFLIFNNMSYRPPTKTVIVKPKIDTKYKFKAGGKRRVIHAKANQATSIGKYIPGVYAIDAEKDTEYGHFTGQMKFDFRYAKGNTVDVNENFNEAALKVKLKGKSDLDKNTLKVTINDKEMKYDASKIYGPYPQNKDISVSATGMVKDKTFTSTSKTIKAKDLGNINSAILDFDEDKISDYVSKKTEEESILRVTLEPFFNQYAYALNNAINQQNFDIISPFLKNKSDAYIDIKNHLSDSKHFEFSQLLSATQSGDIIKAKVQQINQRGEIEYVTYEIEENKDNGILQIINIK . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 90901 92265 . + . GCA_005502385.1_02130_mRNA GCA_005502385.1_02130 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKQCPYCGQELNKSDKQCSNCGNMIPKEKNKATSSSQSEQSNLKFKKFIPWVIIAFIVVLIGIVFILLRNFNSPEAQTKILVNAIDNNDAQKVATLISTKDVPVDDEEASVYIQYIKDEVGMMKFIHDVKHTTDKLNKSNHDSAYIQTKTDKNVLKISKNGMRFLIFNNMSYRPPTKTVIVKPKIDTKYKFKAGGKRRVIHAKANQATSIGKYIPGVYAIDAEKDTEYGHFTGQMKFDFRYAKGNTVDVNENFNEAALKVKLKGKSDLDKNTLKVTINDKEMKYDASKIYGPYPQNKDISVSATGMVKDKTFTSTSKTIKAKDLGNINSAILDFDEDKISDYVSKKTEEESILRVTLEPFFNQYAYALNNAINQQNFDIISPFLKNKSDAYIDIKNHLSDSKHFEFSQLLSATQSGDIIKAKVQQINQRGEIEYVTYEIEENKDNGILQIINIK . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 90901 92265 . + 0 GCA_005502385.1_02130 GCA_005502385.1_02130_gene,GCA_005502385.1_02130_mRNA GCA_005502385.1_02130 Membrane-associated protein TcaA GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKQCPYCGQELNKSDKQCSNCGNMIPKEKNKATSSSQSEQSNLKFKKFIPWVIIAFIVVLIGIVFILLRNFNSPEAQTKILVNAIDNNDAQKVATLISTKDVPVDDEEASVYIQYIKDEVGMMKFIHDVKHTTDKLNKSNHDSAYIQTKTDKNVLKISKNGMRFLIFNNMSYRPPTKTVIVKPKIDTKYKFKAGGKRRVIHAKANQATSIGKYIPGVYAIDAEKDTEYGHFTGQMKFDFRYAKGNTVDVNENFNEAALKVKLKGKSDLDKNTLKVTINDKEMKYDASKIYGPYPQNKDISVSATGMVKDKTFTSTSKTIKAKDLGNINSAILDFDEDKISDYVSKKTEEESILRVTLEPFFNQYAYALNNAINQQNFDIISPFLKNKSDAYIDIKNHLSDSKHFEFSQLLSATQSGDIIKAKVQQINQRGEIEYVTYEIEENKDNGILQIINIK persistent 454 Membrane-associated protein UniRef50_Q5HDJ9,UniRef90_A0A974KXY2 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 92286 93491 . + . GCA_005502385.1_02131_gene GCA_005502385.1_02131 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MEQRHNQDKHSLLFIIILGMLTAIGPLAIDMFLPGLPELKNDFNTTTAHAQLTLSFFMIGLGIGNLFVGPISDSLGRKKPLIIVMTIFTLASLGIIFVHNIWLMIILRLLQGITGGGAAVISRAIASDLYKGNELTKFLSLLMLVNGVAPVIAPALGGIILSVAVWRVIFVILTIFGILMVMGSLTKIPESLSLEYRDSSGIKVIFQNFKSLLGTPRFVLPMLIQGVSFILLFSYISASPFLVQKIYGVSPLHFSWMFAGIGITLIVSSQLTGKLVDYIHTQTLLRLLTCIQIIGVCIVSLTLIQHGSFIFLVIGFITLVAPVTGVATLGFSIAMEESTTGNGSASSLLGLVQFLFGGIVTPLVNVKGEYNSMPYLTIIISAIVILVILHLINFKVFKTKR . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 92286 93491 . + . GCA_005502385.1_02131_mRNA GCA_005502385.1_02131 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MEQRHNQDKHSLLFIIILGMLTAIGPLAIDMFLPGLPELKNDFNTTTAHAQLTLSFFMIGLGIGNLFVGPISDSLGRKKPLIIVMTIFTLASLGIIFVHNIWLMIILRLLQGITGGGAAVISRAIASDLYKGNELTKFLSLLMLVNGVAPVIAPALGGIILSVAVWRVIFVILTIFGILMVMGSLTKIPESLSLEYRDSSGIKVIFQNFKSLLGTPRFVLPMLIQGVSFILLFSYISASPFLVQKIYGVSPLHFSWMFAGIGITLIVSSQLTGKLVDYIHTQTLLRLLTCIQIIGVCIVSLTLIQHGSFIFLVIGFITLVAPVTGVATLGFSIAMEESTTGNGSASSLLGLVQFLFGGIVTPLVNVKGEYNSMPYLTIIISAIVILVILHLINFKVFKTKR . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 92286 93491 . + 0 GCA_005502385.1_02131 GCA_005502385.1_02131_gene,GCA_005502385.1_02131_mRNA GCA_005502385.1_02131 Bicyclomycin resistance protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MEQRHNQDKHSLLFIIILGMLTAIGPLAIDMFLPGLPELKNDFNTTTAHAQLTLSFFMIGLGIGNLFVGPISDSLGRKKPLIIVMTIFTLASLGIIFVHNIWLMIILRLLQGITGGGAAVISRAIASDLYKGNELTKFLSLLMLVNGVAPVIAPALGGIILSVAVWRVIFVILTIFGILMVMGSLTKIPESLSLEYRDSSGIKVIFQNFKSLLGTPRFVLPMLIQGVSFILLFSYISASPFLVQKIYGVSPLHFSWMFAGIGITLIVSSQLTGKLVDYIHTQTLLRLLTCIQIIGVCIVSLTLIQHGSFIFLVIGFITLVAPVTGVATLGFSIAMEESTTGNGSASSLLGLVQFLFGGIVTPLVNVKGEYNSMPYLTIIISAIVILVILHLINFKVFKTKR persistent 401 Bcr/CflA family efflux transporter WP_017174923.1 UPI0002DDE6DD UniRef100_A0A4Q9WRP6,UniRef50_Q9F4G1,UniRef90_A0A6N0I272 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 93545 94096 . - . GCA_005502385.1_02132_gene GCA_005502385.1_02132 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKLKAKYKIIISMIDLLEDYPFEQISIKMICAQSKINRSTFYDNFQDKYDLLSTIQSYHLNKYEKLLKTLSNNFHNIKKEPEKVFKFFHIILKYIYRKKSFFHAIFISNPNRSLVMDYLDITKKYYDKILVENETLIQNRGLFISYTISGQIGVILYWLRSGCQESPKEVANSLLSNTIKLQR . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 93545 94096 . - . GCA_005502385.1_02132_mRNA GCA_005502385.1_02132 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKLKAKYKIIISMIDLLEDYPFEQISIKMICAQSKINRSTFYDNFQDKYDLLSTIQSYHLNKYEKLLKTLSNNFHNIKKEPEKVFKFFHIILKYIYRKKSFFHAIFISNPNRSLVMDYLDITKKYYDKILVENETLIQNRGLFISYTISGQIGVILYWLRSGCQESPKEVANSLLSNTIKLQR . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 93545 94096 . - 0 GCA_005502385.1_02132 GCA_005502385.1_02132_gene,GCA_005502385.1_02132_mRNA GCA_005502385.1_02132 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKLKAKYKIIISMIDLLEDYPFEQISIKMICAQSKINRSTFYDNFQDKYDLLSTIQSYHLNKYEKLLKTLSNNFHNIKKEPEKVFKFFHIILKYIYRKKSFFHAIFISNPNRSLVMDYLDITKKYYDKILVENETLIQNRGLFISYTISGQIGVILYWLRSGCQESPKEVANSLLSNTIKLQR persistent 183 tetR TetR family transcriptional regulator WP_017174922.1 UPI0002E05802 UniRef100_A0A3S7H018,UniRef50_Q2G2W4,UniRef90_A0A3S7H018 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 94217 94864 . + . GCA_005502385.1_02133_gene GCA_005502385.1_02133 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKKMVLINIITIVALVIIGVVGFYFYHNATSYVTTDNAKVDGNQIKIASPASGQIKSFDAKQGDQLKKGDTVAEVTAQGQDGQTQDQKIKMPQDGTIAKTDGMEGSIAQAGSPIAYAYNLDDLYITANIDENDLSSIEKGDKVDVTIDGQDSKIDGKIKEIGKATANSFSLMPSSNSDGNYTKVSQVIPVKISLDSQPSKNVVPGMNAEVKIHKD . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 94217 94864 . + . GCA_005502385.1_02133_mRNA GCA_005502385.1_02133 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKKMVLINIITIVALVIIGVVGFYFYHNATSYVTTDNAKVDGNQIKIASPASGQIKSFDAKQGDQLKKGDTVAEVTAQGQDGQTQDQKIKMPQDGTIAKTDGMEGSIAQAGSPIAYAYNLDDLYITANIDENDLSSIEKGDKVDVTIDGQDSKIDGKIKEIGKATANSFSLMPSSNSDGNYTKVSQVIPVKISLDSQPSKNVVPGMNAEVKIHKD . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 94217 94864 . + 0 GCA_005502385.1_02133 GCA_005502385.1_02133_gene,GCA_005502385.1_02133_mRNA GCA_005502385.1_02133 p-hydroxybenzoic acid efflux pump subunit AaeA GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKKMVLINIITIVALVIIGVVGFYFYHNATSYVTTDNAKVDGNQIKIASPASGQIKSFDAKQGDQLKKGDTVAEVTAQGQDGQTQDQKIKMPQDGTIAKTDGMEGSIAQAGSPIAYAYNLDDLYITANIDENDLSSIEKGDKVDVTIDGQDSKIDGKIKEIGKATANSFSLMPSSNSDGNYTKVSQVIPVKISLDSQPSKNVVPGMNAEVKIHKD persistent 215 hlyD HlyD family efflux transporter periplasmic adaptor subunit WP_048682185.1 UPI00065FC214 UniRef100_UPI00065FC214,UniRef50_Q2G2W5,UniRef90_A0A8X8GPI0 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 94877 96970 . + . GCA_005502385.1_02134_gene GCA_005502385.1_02134 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTVTFIIGYIVAAVILVGLINLFVLKSRHKSKLNQSKGQQVNEESKSQNNPSKFKMSDLEQNNDAKNASSSQISEEKKRYFNNDQSHYKEDNDINNDKRKNHFEEEQEQQDSSSEQIHPEQKQTSHSLHYSDDEQRNTHSEDTVNHNDRDVNNQHLSKDSIYEPINPDSQEGRVNERIKNQNQDFVFGKGITRGKILAAMLFGMFIAILNQTLLNVALPRINTEFNISASTGQWLMTGFMLVNGILIPISAFLFNKYSYRKLFLIALVLFTIGSLVCGISTNFPIMMGGRVLQAIGAGILMPLGSNVIVTIFPPEKRGVAMGTMGIAMILAPAIGPTLSGYIVQNYHWNVMFYMMFILGLLAFLFGLAWFKIYQKTINPKADYRGIVYSTIGFGALLYGFSEAGNKGWGSTEIIIMFIIGVVFIILFVIRELTMKAPMLNLEVLKSPTYTLTTVINMVVMMSLFGGMILLPLYLQNLRGFSALDSGLLLLPGSLLMGVLGPVAGKLLDTIGLKPLALFGIAVMTYGTYELTKLNMDTSYLHIMSIYVIRSLGMAFVMMPLMTAAINALPPRLISHGNAFLNTMRQLAGSIGTAILVTVMTTQSTNHLNAFATELDKTNPVIQDHVREMAAQYGGQQGALQVILTYVNKLASIEGINDAFWIATALSALAFILSLFLKGKKGAEAEHNRLMSKESNKF . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 94877 96970 . + . GCA_005502385.1_02134_mRNA GCA_005502385.1_02134 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTVTFIIGYIVAAVILVGLINLFVLKSRHKSKLNQSKGQQVNEESKSQNNPSKFKMSDLEQNNDAKNASSSQISEEKKRYFNNDQSHYKEDNDINNDKRKNHFEEEQEQQDSSSEQIHPEQKQTSHSLHYSDDEQRNTHSEDTVNHNDRDVNNQHLSKDSIYEPINPDSQEGRVNERIKNQNQDFVFGKGITRGKILAAMLFGMFIAILNQTLLNVALPRINTEFNISASTGQWLMTGFMLVNGILIPISAFLFNKYSYRKLFLIALVLFTIGSLVCGISTNFPIMMGGRVLQAIGAGILMPLGSNVIVTIFPPEKRGVAMGTMGIAMILAPAIGPTLSGYIVQNYHWNVMFYMMFILGLLAFLFGLAWFKIYQKTINPKADYRGIVYSTIGFGALLYGFSEAGNKGWGSTEIIIMFIIGVVFIILFVIRELTMKAPMLNLEVLKSPTYTLTTVINMVVMMSLFGGMILLPLYLQNLRGFSALDSGLLLLPGSLLMGVLGPVAGKLLDTIGLKPLALFGIAVMTYGTYELTKLNMDTSYLHIMSIYVIRSLGMAFVMMPLMTAAINALPPRLISHGNAFLNTMRQLAGSIGTAILVTVMTTQSTNHLNAFATELDKTNPVIQDHVREMAAQYGGQQGALQVILTYVNKLASIEGINDAFWIATALSALAFILSLFLKGKKGAEAEHNRLMSKESNKF . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 94877 96970 . + 0 GCA_005502385.1_02134 GCA_005502385.1_02134_gene,GCA_005502385.1_02134_mRNA GCA_005502385.1_02134 Putative multidrug resistance protein MdtD GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTVTFIIGYIVAAVILVGLINLFVLKSRHKSKLNQSKGQQVNEESKSQNNPSKFKMSDLEQNNDAKNASSSQISEEKKRYFNNDQSHYKEDNDINNDKRKNHFEEEQEQQDSSSEQIHPEQKQTSHSLHYSDDEQRNTHSEDTVNHNDRDVNNQHLSKDSIYEPINPDSQEGRVNERIKNQNQDFVFGKGITRGKILAAMLFGMFIAILNQTLLNVALPRINTEFNISASTGQWLMTGFMLVNGILIPISAFLFNKYSYRKLFLIALVLFTIGSLVCGISTNFPIMMGGRVLQAIGAGILMPLGSNVIVTIFPPEKRGVAMGTMGIAMILAPAIGPTLSGYIVQNYHWNVMFYMMFILGLLAFLFGLAWFKIYQKTINPKADYRGIVYSTIGFGALLYGFSEAGNKGWGSTEIIIMFIIGVVFIILFVIRELTMKAPMLNLEVLKSPTYTLTTVINMVVMMSLFGGMILLPLYLQNLRGFSALDSGLLLLPGSLLMGVLGPVAGKLLDTIGLKPLALFGIAVMTYGTYELTKLNMDTSYLHIMSIYVIRSLGMAFVMMPLMTAAINALPPRLISHGNAFLNTMRQLAGSIGTAILVTVMTTQSTNHLNAFATELDKTNPVIQDHVREMAAQYGGQQGALQVILTYVNKLASIEGINDAFWIATALSALAFILSLFLKGKKGAEAEHNRLMSKESNKF persistent 697 norB Quinolone resistance protein NorB WP_054105730.1 UPI0006B88426 UniRef100_UPI0006B88426,UniRef50_Q9F0Z1,UniRef90_A0A8X8GW79 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 97047 97682 . - . GCA_005502385.1_02135_gene GCA_005502385.1_02135 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MQNQNPNRYQTNRPPYVRVNQQAYYGKKKNSWISLIIHIIILILVGITCYSMYKQPILNFVLANQAIDFSEIKNFQNTTTQIGPLNINISEVANLQGIIDKFILAFNIFFVLCILSMIISILTIVFNRTILKVINFIVIAVVLMIAFSFSYTIQMVGNQVSQNLHHFFLDLAPNQIITEADAIHNALILLSSSLALLFISFFFRNRHPRIK . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 97047 97682 . - . GCA_005502385.1_02135_mRNA GCA_005502385.1_02135 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MQNQNPNRYQTNRPPYVRVNQQAYYGKKKNSWISLIIHIIILILVGITCYSMYKQPILNFVLANQAIDFSEIKNFQNTTTQIGPLNINISEVANLQGIIDKFILAFNIFFVLCILSMIISILTIVFNRTILKVINFIVIAVVLMIAFSFSYTIQMVGNQVSQNLHHFFLDLAPNQIITEADAIHNALILLSSSLALLFISFFFRNRHPRIK . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 97047 97682 . - 0 GCA_005502385.1_02135 GCA_005502385.1_02135_gene,GCA_005502385.1_02135_mRNA GCA_005502385.1_02135 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MQNQNPNRYQTNRPPYVRVNQQAYYGKKKNSWISLIIHIIILILVGITCYSMYKQPILNFVLANQAIDFSEIKNFQNTTTQIGPLNINISEVANLQGIIDKFILAFNIFFVLCILSMIISILTIVFNRTILKVINFIVIAVVLMIAFSFSYTIQMVGNQVSQNLHHFFLDLAPNQIITEADAIHNALILLSSSLALLFISFFFRNRHPRIK persistent 211 ABC transporter permease WP_017174919.1 UPI0002F33031 UniRef100_A0A8X8KHZ1,UniRef50_A0A5B2YYG9,UniRef90_A0A974QNS4 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 97877 98776 . + . GCA_005502385.1_02136_gene GCA_005502385.1_02136 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKTRMVNRIVNKYLLHNRSIQFKSEDEFNSFMERRKDINRAKHKQPPTLNVKANLDKLSLGDMQVFRFNFRHETKKKILYIHGGYNTLQPSPFHWRLMDKLALNTLYEVVLPIYPKAPEFHLKDTFKAINNVYESLLSEVNNENIVIMGDGTGGALALSYVQQLVENDKPLPYKICLISPMLDATMTNPQITEYLVEKDRFVNIQGLQNIMNVWSDKEPLSNSLISPIYGIKQGLPPIIMFGGGKEIYYPDMQRLAYELETHHQSIQFFEYPKMFHDFALFPIHESHKVIKQINKAIHE . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 97877 98776 . + . GCA_005502385.1_02136_mRNA GCA_005502385.1_02136 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKTRMVNRIVNKYLLHNRSIQFKSEDEFNSFMERRKDINRAKHKQPPTLNVKANLDKLSLGDMQVFRFNFRHETKKKILYIHGGYNTLQPSPFHWRLMDKLALNTLYEVVLPIYPKAPEFHLKDTFKAINNVYESLLSEVNNENIVIMGDGTGGALALSYVQQLVENDKPLPYKICLISPMLDATMTNPQITEYLVEKDRFVNIQGLQNIMNVWSDKEPLSNSLISPIYGIKQGLPPIIMFGGGKEIYYPDMQRLAYELETHHQSIQFFEYPKMFHDFALFPIHESHKVIKQINKAIHE . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 97877 98776 . + 0 GCA_005502385.1_02136 GCA_005502385.1_02136_gene,GCA_005502385.1_02136_mRNA GCA_005502385.1_02136 hypothetical protein """""" GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKTRMVNRIVNKYLLHNRSIQFKSEDEFNSFMERRKDINRAKHKQPPTLNVKANLDKLSLGDMQVFRFNFRHETKKKILYIHGGYNTLQPSPFHWRLMDKLALNTLYEVVLPIYPKAPEFHLKDTFKAINNVYESLLSEVNNENIVIMGDGTGGALALSYVQQLVENDKPLPYKICLISPMLDATMTNPQITEYLVEKDRFVNIQGLQNIMNVWSDKEPLSNSLISPIYGIKQGLPPIIMFGGGKEIYYPDMQRLAYELETHHQSIQFFEYPKMFHDFALFPIHESHKVIKQINKAIHE persistent 299 Alpha/beta hydrolase WP_048682300.1 UPI000661046F UniRef100_UPI000661046F,UniRef50_Q2G2W3,UniRef90_A0A974QNU6 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 98828 99244 . - . GCA_005502385.1_02137_gene GCA_005502385.1_02137 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTDTISEILENTLFDLSDTLKIHLIELNENRSLFMNGPSRELIQRTFNISFYQGQKQAIEALDREIKTTTDENDLIANLKRYSQDVEKQLLNVIELHTTTYEPKENLRLAQSLDTYYHCKGQHDIISELLSQVNKYSI . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 98828 99244 . - . GCA_005502385.1_02137_mRNA GCA_005502385.1_02137 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTDTISEILENTLFDLSDTLKIHLIELNENRSLFMNGPSRELIQRTFNISFYQGQKQAIEALDREIKTTTDENDLIANLKRYSQDVEKQLLNVIELHTTTYEPKENLRLAQSLDTYYHCKGQHDIISELLSQVNKYSI . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 98828 99244 . - 0 GCA_005502385.1_02137 GCA_005502385.1_02137_gene,GCA_005502385.1_02137_mRNA GCA_005502385.1_02137 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTDTISEILENTLFDLSDTLKIHLIELNENRSLFMNGPSRELIQRTFNISFYQGQKQAIEALDREIKTTTDENDLIANLKRYSQDVEKQLLNVIELHTTTYEPKENLRLAQSLDTYYHCKGQHDIISELLSQVNKYSI persistent 138 hypothetical protein WP_017174917.1 UPI0002F7026D UniRef100_A0A4Q9WRP4,UniRef50_A0A6N0I1W9,UniRef90_A0A6N0I1W9 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 99244 99723 . - . GCA_005502385.1_02138_gene GCA_005502385.1_02138 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNYPFIIHKSVVSSQVDFNQHMHDAEYNSVFSEVISEFNHYNGLSLKEREALNYTTFTVEEHTTYLKELHFEESFSVRVRIYNYDEKRVHFFLELFKNDETLAATSEIMMMGINRSTRRPASFPAHYKSNIQIYYDSQYDKRWPKSLGHQIGIPKKGEA . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 99244 99723 . - . GCA_005502385.1_02138_mRNA GCA_005502385.1_02138 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNYPFIIHKSVVSSQVDFNQHMHDAEYNSVFSEVISEFNHYNGLSLKEREALNYTTFTVEEHTTYLKELHFEESFSVRVRIYNYDEKRVHFFLELFKNDETLAATSEIMMMGINRSTRRPASFPAHYKSNIQIYYDSQYDKRWPKSLGHQIGIPKKGEA . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 99244 99723 . - 0 GCA_005502385.1_02138 GCA_005502385.1_02138_gene,GCA_005502385.1_02138_mRNA GCA_005502385.1_02138 hypothetical protein GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MNYPFIIHKSVVSSQVDFNQHMHDAEYNSVFSEVISEFNHYNGLSLKEREALNYTTFTVEEHTTYLKELHFEESFSVRVRIYNYDEKRVHFFLELFKNDETLAATSEIMMMGINRSTRRPASFPAHYKSNIQIYYDSQYDKRWPKSLGHQIGIPKKGEA persistent 159 Thioesterase WP_017174916.1 UPI0002DBCBA8 UniRef100_A0A4V2KXC2,UniRef50_Q2FVR7,UniRef90_A0A6N0I212 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 99845 100792 . + . GCA_005502385.1_02139_gene GCA_005502385.1_02139 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTMIIRYQTKDEPLTQVEQISDVPNNATIVWLDFEDATSKENDFLIENYNFNYLELEDAIKGVPRVKYKSYDDYQYMVFHSMHKDNFTPIALNVFLDGKTLITYHQHHFESLMEVVKMNARKHDPDLDCADIVIHILDMMVDKYFDFVYTIEDEVYNFEDAHVDDTHSKKVMDNVFQLRSNLIKIKRVLFPMQELVNTIKTEGNLIVDYKHSMYIQHIDDHIIKQNNIIRTSQEMTNEIRENFESYSSFRMNSIMQVLTLVSVIFSPLTFIVGVYGMNFEYMPELKWHYGYFICLTIMLLISIALILFFKKKKWF . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 99845 100792 . + . GCA_005502385.1_02139_mRNA GCA_005502385.1_02139 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTMIIRYQTKDEPLTQVEQISDVPNNATIVWLDFEDATSKENDFLIENYNFNYLELEDAIKGVPRVKYKSYDDYQYMVFHSMHKDNFTPIALNVFLDGKTLITYHQHHFESLMEVVKMNARKHDPDLDCADIVIHILDMMVDKYFDFVYTIEDEVYNFEDAHVDDTHSKKVMDNVFQLRSNLIKIKRVLFPMQELVNTIKTEGNLIVDYKHSMYIQHIDDHIIKQNNIIRTSQEMTNEIRENFESYSSFRMNSIMQVLTLVSVIFSPLTFIVGVYGMNFEYMPELKWHYGYFICLTIMLLISIALILFFKKKKWF . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 99845 100792 . + 0 GCA_005502385.1_02139 GCA_005502385.1_02139_gene,GCA_005502385.1_02139_mRNA GCA_005502385.1_02139 Cobalt/magnesium transport protein CorA GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MTMIIRYQTKDEPLTQVEQISDVPNNATIVWLDFEDATSKENDFLIENYNFNYLELEDAIKGVPRVKYKSYDDYQYMVFHSMHKDNFTPIALNVFLDGKTLITYHQHHFESLMEVVKMNARKHDPDLDCADIVIHILDMMVDKYFDFVYTIEDEVYNFEDAHVDDTHSKKVMDNVFQLRSNLIKIKRVLFPMQELVNTIKTEGNLIVDYKHSMYIQHIDDHIIKQNNIIRTSQEMTNEIRENFESYSSFRMNSIMQVLTLVSVIFSPLTFIVGVYGMNFEYMPELKWHYGYFICLTIMLLISIALILFFKKKKWF persistent 315 corA magnesium/cobalt transporter CorA GO:0006824,GO:0015087,GO:0015095,GO:0015693,GO:0016020 WP_017174915.1 UPI0002F2EE18 UniRef100_A0A8X8GMK2,UniRef50_A0A2I7YA74,UniRef90_A0A8X8GMK2 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 100827 101876 . + . GCA_005502385.1_02140_gene GCA_005502385.1_02140 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSDIQREQRKNEHVEIAMAQQDVPQSDFDRMRFVHHSIPNINVNQVDLTSHTSNFDMTFPLYINAMTGGSDWTKTINEKLAVVARETGLAMAVGSTHAALRNPKMAESFSIVRKTNPEGIIFSNVGADVPVDKAVKAVELLDAQALQVHVNAPQELVMPEGNREFSTWLENVEAIVQRVSVPVIIKEVGFGMSKELLQSLVNIGVTYVDVSGKGGTNFVTIENERRSNKDMDYLSNWGQSTVESLLESISYQDKLNVFASGGLRTPLDAIKSLALGAKAVGMSRPFLNQVEHAGITSTIEYVESFIDHMKSIMTMLDAKDINDLKQSKIVFDSKLMSWIEQRHLKVERG . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 100827 101876 . + . GCA_005502385.1_02140_mRNA GCA_005502385.1_02140 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSDIQREQRKNEHVEIAMAQQDVPQSDFDRMRFVHHSIPNINVNQVDLTSHTSNFDMTFPLYINAMTGGSDWTKTINEKLAVVARETGLAMAVGSTHAALRNPKMAESFSIVRKTNPEGIIFSNVGADVPVDKAVKAVELLDAQALQVHVNAPQELVMPEGNREFSTWLENVEAIVQRVSVPVIIKEVGFGMSKELLQSLVNIGVTYVDVSGKGGTNFVTIENERRSNKDMDYLSNWGQSTVESLLESISYQDKLNVFASGGLRTPLDAIKSLALGAKAVGMSRPFLNQVEHAGITSTIEYVESFIDHMKSIMTMLDAKDINDLKQSKIVFDSKLMSWIEQRHLKVERG . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 100827 101876 . + 0 GCA_005502385.1_02140 GCA_005502385.1_02140_gene,GCA_005502385.1_02140_mRNA GCA_005502385.1_02140 Isopentenyl-diphosphate delta-isomerase GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MSDIQREQRKNEHVEIAMAQQDVPQSDFDRMRFVHHSIPNINVNQVDLTSHTSNFDMTFPLYINAMTGGSDWTKTINEKLAVVARETGLAMAVGSTHAALRNPKMAESFSIVRKTNPEGIIFSNVGADVPVDKAVKAVELLDAQALQVHVNAPQELVMPEGNREFSTWLENVEAIVQRVSVPVIIKEVGFGMSKELLQSLVNIGVTYVDVSGKGGTNFVTIENERRSNKDMDYLSNWGQSTVESLLESISYQDKLNVFASGGLRTPLDAIKSLALGAKAVGMSRPFLNQVEHAGITSTIEYVESFIDHMKSIMTMLDAKDINDLKQSKIVFDSKLMSWIEQRHLKVERG persistent 349 fni type 2 isopentenyl-diphosphate Delta-isomerase 5.3.3.2 GO:0004452,GO:0008299,GO:0010181 WP_019834785.1 UPI0003789F94 UniRef100_A0A4Q9WV46,UniRef50_Q2FVR9,UniRef90_A0A4Q9WV46 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 101938 102546 . - . GCA_005502385.1_02141_gene GCA_005502385.1_02141 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MDFVNKPTIETAKSLLGVKISYQDQTQTYSGYIVETEAYLGFKDKAAHGFGGKQTPKVTSLYQRGGTIYGHVMHTHLLINLVTREEGIPEGVLIRAVEPEDGIETMKINRNKSGFELTNGPGKWTKAFNIPRAIDGSTINQCRLSIDVKNRKFPREIEESARIGIPNKGEWTEKHLRYTVKGNPYVSRMRKSDCLLPEETWK . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 101938 102546 . - . GCA_005502385.1_02141_mRNA GCA_005502385.1_02141 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MDFVNKPTIETAKSLLGVKISYQDQTQTYSGYIVETEAYLGFKDKAAHGFGGKQTPKVTSLYQRGGTIYGHVMHTHLLINLVTREEGIPEGVLIRAVEPEDGIETMKINRNKSGFELTNGPGKWTKAFNIPRAIDGSTINQCRLSIDVKNRKFPREIEESARIGIPNKGEWTEKHLRYTVKGNPYVSRMRKSDCLLPEETWK . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 101938 102546 . - 0 GCA_005502385.1_02141 GCA_005502385.1_02141_gene,GCA_005502385.1_02141_mRNA GCA_005502385.1_02141 Putative 3-methyladenine DNA glycosylase GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MDFVNKPTIETAKSLLGVKISYQDQTQTYSGYIVETEAYLGFKDKAAHGFGGKQTPKVTSLYQRGGTIYGHVMHTHLLINLVTREEGIPEGVLIRAVEPEDGIETMKINRNKSGFELTNGPGKWTKAFNIPRAIDGSTINQCRLSIDVKNRKFPREIEESARIGIPNKGEWTEKHLRYTVKGNPYVSRMRKSDCLLPEETWK persistent 202 Putative 3-methyladenine DNA glycosylase 3.2.2.21 WP_017174913.1 UPI000306A09B UniRef100_A0A4Q9WRN6,UniRef50_B9DLR4,UniRef90_A0A657M335 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 102805 103167 . + . GCA_005502385.1_02142_gene GCA_005502385.1_02142 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKLTFQKLVNKEMIYSIFIFVLSGLCEIGGGYLIWLWLREGQSSWLGWIGGLVLVLYGVIATFQVFPTFGRVYAAYGGVFIIMSIIWSFVFDKQIPDKYDVLGAVVCIIGVLIMILPNRA . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 102805 103167 . + . GCA_005502385.1_02142_mRNA GCA_005502385.1_02142 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKLTFQKLVNKEMIYSIFIFVLSGLCEIGGGYLIWLWLREGQSSWLGWIGGLVLVLYGVIATFQVFPTFGRVYAAYGGVFIIMSIIWSFVFDKQIPDKYDVLGAVVCIIGVLIMILPNRA . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 102805 103167 . + 0 GCA_005502385.1_02142 GCA_005502385.1_02142_gene,GCA_005502385.1_02142_mRNA GCA_005502385.1_02142 hypothetical protein UPF0060 membrane protein YnfA GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKLTFQKLVNKEMIYSIFIFVLSGLCEIGGGYLIWLWLREGQSSWLGWIGGLVLVLYGVIATFQVFPTFGRVYAAYGGVFIIMSIIWSFVFDKQIPDKYDVLGAVVCIIGVLIMILPNRA persistent 120 ynfA YnfA family protein GO:0016020 UniRef50_Q9K9A5,UniRef90_A0A4Q9WV60 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 103197 104207 . + . GCA_005502385.1_02143_gene GCA_005502385.1_02143 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIVEVEKQNHGIDLIKIDNDDTYIVFTNYGARIVCWKYHDNNIVLGNKVEADEFYPENPYKFGATIGRYAGRIENASFNLNNKYYQLEENEMTNQLHGGSNGLDRRLFDYEIQNNITNIKVIFKLQIQSKEDGYPGDMMIKVIHTYDVEHRWTIEYEATSNEDTLFNPTNHVYFNLNRDNNVIDNHSIISEQLKMYPIDQNHLISSQQPIDLLERFNHRPIQFQDIFNSEDKQIKEQIYFNKGLDHPFDIGHHRLIVENNEFALDVETTMTNIVIFTFNDTSEWKSDFNIYKPHSGVALETQYLPNDINNEGNKAKSILKANVPFYAKTIYHISEK . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 103197 104207 . + . GCA_005502385.1_02143_mRNA GCA_005502385.1_02143 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIVEVEKQNHGIDLIKIDNDDTYIVFTNYGARIVCWKYHDNNIVLGNKVEADEFYPENPYKFGATIGRYAGRIENASFNLNNKYYQLEENEMTNQLHGGSNGLDRRLFDYEIQNNITNIKVIFKLQIQSKEDGYPGDMMIKVIHTYDVEHRWTIEYEATSNEDTLFNPTNHVYFNLNRDNNVIDNHSIISEQLKMYPIDQNHLISSQQPIDLLERFNHRPIQFQDIFNSEDKQIKEQIYFNKGLDHPFDIGHHRLIVENNEFALDVETTMTNIVIFTFNDTSEWKSDFNIYKPHSGVALETQYLPNDINNEGNKAKSILKANVPFYAKTIYHISEK . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 103197 104207 . + 0 GCA_005502385.1_02143 GCA_005502385.1_02143_gene,GCA_005502385.1_02143_mRNA GCA_005502385.1_02143 Aldose 1-epimerase GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIVEVEKQNHGIDLIKIDNDDTYIVFTNYGARIVCWKYHDNNIVLGNKVEADEFYPENPYKFGATIGRYAGRIENASFNLNNKYYQLEENEMTNQLHGGSNGLDRRLFDYEIQNNITNIKVIFKLQIQSKEDGYPGDMMIKVIHTYDVEHRWTIEYEATSNEDTLFNPTNHVYFNLNRDNNVIDNHSIISEQLKMYPIDQNHLISSQQPIDLLERFNHRPIQFQDIFNSEDKQIKEQIYFNKGLDHPFDIGHHRLIVENNEFALDVETTMTNIVIFTFNDTSEWKSDFNIYKPHSGVALETQYLPNDINNEGNKAKSILKANVPFYAKTIYHISEK persistent 336 Aldose 1-epimerase WP_017174911.1 UPI0002F9D01B UniRef100_A0A4Q9WSX8,UniRef50_A0A0D6XRD3,UniRef90_A0A4Q9WSX8 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 104263 104919 . - . GCA_005502385.1_02144_gene GCA_005502385.1_02144 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIPVYAISTGKIETLNYDQKRPMHSALNKTMFSGKMWLSYTGFSEDEQAYKDHGGPHKAVCCFSKKNYAMYKDDINILPDYAMFGENLTLVDLDENDVYFGNQYQLGEAIVEVSEIREPCWKIQRKYGIKHLVKRMSSSGKTGFYMRVLKEGYVQQQDHLLLLKTAESPTRLSVQNLNDIYYNDRENIDRLNKAINNPYLSPKRIEKLKLLKEKAMNK . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 104263 104919 . - . GCA_005502385.1_02144_mRNA GCA_005502385.1_02144 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIPVYAISTGKIETLNYDQKRPMHSALNKTMFSGKMWLSYTGFSEDEQAYKDHGGPHKAVCCFSKKNYAMYKDDINILPDYAMFGENLTLVDLDENDVYFGNQYQLGEAIVEVSEIREPCWKIQRKYGIKHLVKRMSSSGKTGFYMRVLKEGYVQQQDHLLLLKTAESPTRLSVQNLNDIYYNDRENIDRLNKAINNPYLSPKRIEKLKLLKEKAMNK . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 104263 104919 . - 0 GCA_005502385.1_02144 GCA_005502385.1_02144_gene,GCA_005502385.1_02144_mRNA GCA_005502385.1_02144 Protein YiiM GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MIPVYAISTGKIETLNYDQKRPMHSALNKTMFSGKMWLSYTGFSEDEQAYKDHGGPHKAVCCFSKKNYAMYKDDINILPDYAMFGENLTLVDLDENDVYFGNQYQLGEAIVEVSEIREPCWKIQRKYGIKHLVKRMSSSGKTGFYMRVLKEGYVQQQDHLLLLKTAESPTRLSVQNLNDIYYNDRENIDRLNKAINNPYLSPKRIEKLKLLKEKAMNK persistent 218 MOSC domain-containing protein WP_017174910.1 UPI00031DEEFA UniRef100_A0A4Q9WSS5,UniRef50_Q5HLQ8,UniRef90_A0A4Q9WSS5 . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka gene 105080 105769 . + . GCA_005502385.1_02145_gene GCA_005502385.1_02145 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKDAKELKLMTTDDAVAQIQDNMILGIGTGSTIELLIPKIAERIQQDNLNVTGVCTSNKSEFLAKQYNINVVDINDITYIDLAIDGADEIDSDLNLIKGGGGALFREKVIDEMARQFIVLADESKIVNYLGETFKLPIEVDKFNWLLISKKIEAYNDISVERRMNEDIPFITDNGNYILDCELKSKIDPYQLHEFLIHLTGVLETGYFLDMTTQAIIGTQEGIKVINKK . . . . . . . GCA_005502385.1|SCOV01000008.1 prokka mRNA 105080 105769 . + . GCA_005502385.1_02145_mRNA GCA_005502385.1_02145 GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKDAKELKLMTTDDAVAQIQDNMILGIGTGSTIELLIPKIAERIQQDNLNVTGVCTSNKSEFLAKQYNINVVDINDITYIDLAIDGADEIDSDLNLIKGGGGALFREKVIDEMARQFIVLADESKIVNYLGETFKLPIEVDKFNWLLISKKIEAYNDISVERRMNEDIPFITDNGNYILDCELKSKIDPYQLHEFLIHLTGVLETGYFLDMTTQAIIGTQEGIKVINKK . . . . . . . GCA_005502385.1|SCOV01000008.1 Prodigal:002006 CDS 105080 105769 . + 0 GCA_005502385.1_02145 GCA_005502385.1_02145_gene,GCA_005502385.1_02145_mRNA GCA_005502385.1_02145 Ribose-5-phosphate isomerase A GCA_005502385.1 SCOV01000008.1 GCA_005502385.1|SCOV01000008.1 GCA_005502385.1_SCOV01000008.1 MKDAKELKLMTTDDAVAQIQDNMILGIGTGSTIELLIPKIAERIQQDNLNVTGVCTSNKSEFLAKQYNINVVDINDITYIDLAIDGADEIDSDLNLIKGGGGALFREKVIDEMARQFIVLADESKIVNYLGETFKLPIEVDKFNWLLISKKIEAYNDISVERRMNEDIPFITDNGNYILDCELKSKIDPYQLHEFLIHLTGVLETGYFLDMTTQAIIGTQEGIKVINKK persistent 229 ribose 5-phosphate isomerase A 5.3.1.6 UniRef50_Q5HLQ9,UniRef90_A0A3S7GZP5 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 405 514 . + . GCA_005502385.1_02146_gene GCA_005502385.1_02146 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 405 514 . + . GCA_005502385.1_02146_mRNA GCA_005502385.1_02146 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 . . . . . . . GCA_005502385.1|SCOV01000009.1 barrnap:0.9 rRNA 405 514 1.4e-11 + . GCA_005502385.1_02146 GCA_005502385.1_02146_gene,GCA_005502385.1_02146_mRNA GCA_005502385.1_02146 5S ribosomal RNA GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 695 1963 . - . GCA_005502385.1_02147_gene GCA_005502385.1_02147 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MVLKTTVTATDVDEAYLRIKDVVKETPLQYDHYLSQKYNCNVYLKREDLQWVRSFKLRGAYNAISVLDTQAKSKGITCASAGNHAQGVAYTAKALNLKAVIFMPVTTPLQKVNKVKFFGAENVEIVLTGDTFDDCLKEALVYTDEHHMTFIDPFNNVYTIAGQGTLAKEILLEAKKEKIQFDYLFAAIGGGGLISGVSTYMHEHSPHTQIIGVEPAGASSMYESVVVQNKVVTLEHIDKFVDGASVARVGDITFNIVKQYVNDYLQIDEGAVCSTILDMYSKQAIVAEPAGALSVSALEFYKDNIIGKTVVCVVSGGNNDINRMKEIEERSLLYEEMKHYFILNFPQRPGALKEFVNDVLGPQDDITKFEYLKKASQNTGTVIIGIQLNNHQDLEQLKHNVDEFDPSNIYINENKMLYSLLI . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 695 1963 . - . GCA_005502385.1_02147_mRNA GCA_005502385.1_02147 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MVLKTTVTATDVDEAYLRIKDVVKETPLQYDHYLSQKYNCNVYLKREDLQWVRSFKLRGAYNAISVLDTQAKSKGITCASAGNHAQGVAYTAKALNLKAVIFMPVTTPLQKVNKVKFFGAENVEIVLTGDTFDDCLKEALVYTDEHHMTFIDPFNNVYTIAGQGTLAKEILLEAKKEKIQFDYLFAAIGGGGLISGVSTYMHEHSPHTQIIGVEPAGASSMYESVVVQNKVVTLEHIDKFVDGASVARVGDITFNIVKQYVNDYLQIDEGAVCSTILDMYSKQAIVAEPAGALSVSALEFYKDNIIGKTVVCVVSGGNNDINRMKEIEERSLLYEEMKHYFILNFPQRPGALKEFVNDVLGPQDDITKFEYLKKASQNTGTVIIGIQLNNHQDLEQLKHNVDEFDPSNIYINENKMLYSLLI . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 695 1963 . - 0 GCA_005502385.1_02147 GCA_005502385.1_02147_gene,GCA_005502385.1_02147_mRNA GCA_005502385.1_02147 L-threonine dehydratase biosynthetic IlvA GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MVLKTTVTATDVDEAYLRIKDVVKETPLQYDHYLSQKYNCNVYLKREDLQWVRSFKLRGAYNAISVLDTQAKSKGITCASAGNHAQGVAYTAKALNLKAVIFMPVTTPLQKVNKVKFFGAENVEIVLTGDTFDDCLKEALVYTDEHHMTFIDPFNNVYTIAGQGTLAKEILLEAKKEKIQFDYLFAAIGGGGLISGVSTYMHEHSPHTQIIGVEPAGASSMYESVVVQNKVVTLEHIDKFVDGASVARVGDITFNIVKQYVNDYLQIDEGAVCSTILDMYSKQAIVAEPAGALSVSALEFYKDNIIGKTVVCVVSGGNNDINRMKEIEERSLLYEEMKHYFILNFPQRPGALKEFVNDVLGPQDDITKFEYLKKASQNTGTVIIGIQLNNHQDLEQLKHNVDEFDPSNIYINENKMLYSLLI persistent 422 ilvA threonine ammonia-lyase IlvA 4.3.1.19 GO:0004794,GO:0006520 UniRef50_P37946,UniRef90_A0A3S7GWT9 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 1976 2545 . - . GCA_005502385.1_02148_gene GCA_005502385.1_02148 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MDIQPITQYTGKVVPLFNDNIDTDQIIPKVHLKRITKTGFGPFAFDEWRYLPDGSDNPDFNLNKPKYKGASILITGDNFGCGSSREHAAWALKDFGFNIIIAGGFSDIFYMNCTKNGMLPIVLNEKSRKYLADQNNITVDLPNQTVSANNQSFHFDIDETWKDKLINGLDDIAITLKYEELIEKYEKTM . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 1976 2545 . - . GCA_005502385.1_02148_mRNA GCA_005502385.1_02148 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MDIQPITQYTGKVVPLFNDNIDTDQIIPKVHLKRITKTGFGPFAFDEWRYLPDGSDNPDFNLNKPKYKGASILITGDNFGCGSSREHAAWALKDFGFNIIIAGGFSDIFYMNCTKNGMLPIVLNEKSRKYLADQNNITVDLPNQTVSANNQSFHFDIDETWKDKLINGLDDIAITLKYEELIEKYEKTM . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 1976 2545 . - 0 GCA_005502385.1_02148 GCA_005502385.1_02148_gene,GCA_005502385.1_02148_mRNA GCA_005502385.1_02148 3-isopropylmalate dehydratase small subunit GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MDIQPITQYTGKVVPLFNDNIDTDQIIPKVHLKRITKTGFGPFAFDEWRYLPDGSDNPDFNLNKPKYKGASILITGDNFGCGSSREHAAWALKDFGFNIIIAGGFSDIFYMNCTKNGMLPIVLNEKSRKYLADQNNITVDLPNQTVSANNQSFHFDIDETWKDKLINGLDDIAITLKYEELIEKYEKTM persistent 189 3-isopropylmalate dehydratase small subunit WP_137689709.1 UPI0010F8E8D5 UniRef100_UPI0010F8E8D5,UniRef50_Q8Y5R6,UniRef90_A0A3S7H019 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 2549 3919 . - . GCA_005502385.1_02149_gene GCA_005502385.1_02149 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MAQTLFDKVWNKHVLTGNEGEPQLLYIDLHLIHEVTSPQAFEGLRLQKRQLRRPDLTFATLDHNVPTIDIFNIRDEIANKQITTLQKNAKDFGVHIFDMGSDEQGIVHMVGPETGLTQPGKTIVCGDSHTATHGAFGAIAFGIGTSEVEHVFATQTLWQTKPKNLKIEVSGKLQPGVYAKDIILHLINQHGVDFGTGYALEFTGETIQSLSMEGRMTICNMAIEGGAKYGIIQPDETTFEYIKGRPYAQNFNQSIGEWQKLYSDEDAHFDKVITLDVTNLEPQVTWGTNPEMGVNFSSPFPEIQNINDERAYNYMGLKPGQKAEDIDLGYVFLGSCTNARLSDLIEASHIVKGKKVHPKITAIVVPGSRTVKKEAESLGLDKVFKEAGFEWREPGCSMCLGMNPDQVPEGVHCASTSNRNFEGRQGKGARTHLVSPAMAAAAAINGKFVDVRKVVV . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 2549 3919 . - . GCA_005502385.1_02149_mRNA GCA_005502385.1_02149 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MAQTLFDKVWNKHVLTGNEGEPQLLYIDLHLIHEVTSPQAFEGLRLQKRQLRRPDLTFATLDHNVPTIDIFNIRDEIANKQITTLQKNAKDFGVHIFDMGSDEQGIVHMVGPETGLTQPGKTIVCGDSHTATHGAFGAIAFGIGTSEVEHVFATQTLWQTKPKNLKIEVSGKLQPGVYAKDIILHLINQHGVDFGTGYALEFTGETIQSLSMEGRMTICNMAIEGGAKYGIIQPDETTFEYIKGRPYAQNFNQSIGEWQKLYSDEDAHFDKVITLDVTNLEPQVTWGTNPEMGVNFSSPFPEIQNINDERAYNYMGLKPGQKAEDIDLGYVFLGSCTNARLSDLIEASHIVKGKKVHPKITAIVVPGSRTVKKEAESLGLDKVFKEAGFEWREPGCSMCLGMNPDQVPEGVHCASTSNRNFEGRQGKGARTHLVSPAMAAAAAINGKFVDVRKVVV . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 2549 3919 . - 0 GCA_005502385.1_02149 GCA_005502385.1_02149_gene,GCA_005502385.1_02149_mRNA GCA_005502385.1_02149 3-isopropylmalate dehydratase large subunit GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MAQTLFDKVWNKHVLTGNEGEPQLLYIDLHLIHEVTSPQAFEGLRLQKRQLRRPDLTFATLDHNVPTIDIFNIRDEIANKQITTLQKNAKDFGVHIFDMGSDEQGIVHMVGPETGLTQPGKTIVCGDSHTATHGAFGAIAFGIGTSEVEHVFATQTLWQTKPKNLKIEVSGKLQPGVYAKDIILHLINQHGVDFGTGYALEFTGETIQSLSMEGRMTICNMAIEGGAKYGIIQPDETTFEYIKGRPYAQNFNQSIGEWQKLYSDEDAHFDKVITLDVTNLEPQVTWGTNPEMGVNFSSPFPEIQNINDERAYNYMGLKPGQKAEDIDLGYVFLGSCTNARLSDLIEASHIVKGKKVHPKITAIVVPGSRTVKKEAESLGLDKVFKEAGFEWREPGCSMCLGMNPDQVPEGVHCASTSNRNFEGRQGKGARTHLVSPAMAAAAAINGKFVDVRKVVV persistent 456 3-isopropylmalate dehydratase large subunit 4.2.1.33,4.2.1.35 WP_049379602.1 UPI00066D5458 UniRef100_UPI00066D5458,UniRef50_P80858,UniRef90_A0A1J3ZU03 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 3937 4980 . - . GCA_005502385.1_02150_gene GCA_005502385.1_02150 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTYKIVALPGDGIGPEILNGSLELLEIISKKYNFTYNLKSYDFGGAAIDTHGTPLPNETLSACQEADAILLGAVGGPKWTDPNNRPEQGLLALRKKLGLFANIRPTKVTEGTSQFSPLKEERVKHTDLVIVRELTSGIYFGEPRHMNHSEALDSLTYTKAEIERIAKVAFELARTRSKKVTSVDKENVLASSKLWRKTVTEVSKSYPDIELNHLLVDACSMHLITHPSQFDVIVTENLFGDILSDEASVIPGSLGLSPSASFSEHGTRLYEPIHGSAPDIAHQNLANPFGMVLSLAMCLRESLNQSVAAEELEHAVYHLIKIGKTTKDLGGHYKTSDIFELLKKSYQ . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 3937 4980 . - . GCA_005502385.1_02150_mRNA GCA_005502385.1_02150 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTYKIVALPGDGIGPEILNGSLELLEIISKKYNFTYNLKSYDFGGAAIDTHGTPLPNETLSACQEADAILLGAVGGPKWTDPNNRPEQGLLALRKKLGLFANIRPTKVTEGTSQFSPLKEERVKHTDLVIVRELTSGIYFGEPRHMNHSEALDSLTYTKAEIERIAKVAFELARTRSKKVTSVDKENVLASSKLWRKTVTEVSKSYPDIELNHLLVDACSMHLITHPSQFDVIVTENLFGDILSDEASVIPGSLGLSPSASFSEHGTRLYEPIHGSAPDIAHQNLANPFGMVLSLAMCLRESLNQSVAAEELEHAVYHLIKIGKTTKDLGGHYKTSDIFELLKKSYQ . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 3937 4980 . - 0 GCA_005502385.1_02150 GCA_005502385.1_02150_gene,GCA_005502385.1_02150_mRNA GCA_005502385.1_02150 3-isopropylmalate dehydrogenase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTYKIVALPGDGIGPEILNGSLELLEIISKKYNFTYNLKSYDFGGAAIDTHGTPLPNETLSACQEADAILLGAVGGPKWTDPNNRPEQGLLALRKKLGLFANIRPTKVTEGTSQFSPLKEERVKHTDLVIVRELTSGIYFGEPRHMNHSEALDSLTYTKAEIERIAKVAFELARTRSKKVTSVDKENVLASSKLWRKTVTEVSKSYPDIELNHLLVDACSMHLITHPSQFDVIVTENLFGDILSDEASVIPGSLGLSPSASFSEHGTRLYEPIHGSAPDIAHQNLANPFGMVLSLAMCLRESLNQSVAAEELEHAVYHLIKIGKTTKDLGGHYKTSDIFELLKKSYQ persistent 347 leuB 3-isopropylmalate dehydrogenase 1.1.1.85 GO:0003862,GO:0009098 WP_017175293.1 UPI0002FAFC94 UniRef100_A0A4Q9WQ87,UniRef50_Q49Z13,UniRef90_A0A4Q9WQ87 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 4980 6512 . - . GCA_005502385.1_02151_gene GCA_005502385.1_02151 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MESHIQIFDTTLRDGEQTPGVNFSFDERLSIAKQLEKWGVDVIEAGFPASSTGSFKSVEAISKALTTTAVCGLARCKKSDIDAVYEATKCAAKPRVHVFIATSPIHLEHKLKMTQEEVLESIKEHVSYAKSLFDVVQFSPEDASRTDQAFLIKSVQTAVDAGATIINIPDTVGYSYPSEYGAIFKSLITNVKSEKEIIYSAHCHDDLGMAVANSLAAIENGAKRIEGTVNGIGERAGNTALEEIALALYVRKAHYGIETKLKLEQTKLTSDLISRYAGIRVPRNKAIVGQNAFSHESGIHQDGVLKNPETYEIMTPQLVGISKNELPLGKLSGKHAFAEKLKTLGYDIEPKQQIELFKQFKAVADKKKSVSDRDIHAIIQGSEHEQNAIYQVETLQLQYVSNGLQSAVVVIKDKKGHIYQDSSIGTGSIVAIYNAVDRIFKKDSELIDYRIDSVTEGTDAQAEVHVELVIENQHVNGIGIDHDILQASCKAYVEAHAKYIAQDLEKVGNK . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 4980 6512 . - . GCA_005502385.1_02151_mRNA GCA_005502385.1_02151 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MESHIQIFDTTLRDGEQTPGVNFSFDERLSIAKQLEKWGVDVIEAGFPASSTGSFKSVEAISKALTTTAVCGLARCKKSDIDAVYEATKCAAKPRVHVFIATSPIHLEHKLKMTQEEVLESIKEHVSYAKSLFDVVQFSPEDASRTDQAFLIKSVQTAVDAGATIINIPDTVGYSYPSEYGAIFKSLITNVKSEKEIIYSAHCHDDLGMAVANSLAAIENGAKRIEGTVNGIGERAGNTALEEIALALYVRKAHYGIETKLKLEQTKLTSDLISRYAGIRVPRNKAIVGQNAFSHESGIHQDGVLKNPETYEIMTPQLVGISKNELPLGKLSGKHAFAEKLKTLGYDIEPKQQIELFKQFKAVADKKKSVSDRDIHAIIQGSEHEQNAIYQVETLQLQYVSNGLQSAVVVIKDKKGHIYQDSSIGTGSIVAIYNAVDRIFKKDSELIDYRIDSVTEGTDAQAEVHVELVIENQHVNGIGIDHDILQASCKAYVEAHAKYIAQDLEKVGNK . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 4980 6512 . - 0 GCA_005502385.1_02151 GCA_005502385.1_02151_gene,GCA_005502385.1_02151_mRNA GCA_005502385.1_02151 2-isopropylmalate synthase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MESHIQIFDTTLRDGEQTPGVNFSFDERLSIAKQLEKWGVDVIEAGFPASSTGSFKSVEAISKALTTTAVCGLARCKKSDIDAVYEATKCAAKPRVHVFIATSPIHLEHKLKMTQEEVLESIKEHVSYAKSLFDVVQFSPEDASRTDQAFLIKSVQTAVDAGATIINIPDTVGYSYPSEYGAIFKSLITNVKSEKEIIYSAHCHDDLGMAVANSLAAIENGAKRIEGTVNGIGERAGNTALEEIALALYVRKAHYGIETKLKLEQTKLTSDLISRYAGIRVPRNKAIVGQNAFSHESGIHQDGVLKNPETYEIMTPQLVGISKNELPLGKLSGKHAFAEKLKTLGYDIEPKQQIELFKQFKAVADKKKSVSDRDIHAIIQGSEHEQNAIYQVETLQLQYVSNGLQSAVVVIKDKKGHIYQDSSIGTGSIVAIYNAVDRIFKKDSELIDYRIDSVTEGTDAQAEVHVELVIENQHVNGIGIDHDILQASCKAYVEAHAKYIAQDLEKVGNK persistent 510 2-isopropylmalate synthase 2.3.3.13 GO:0003852,GO:0009098 WP_049379603.1 UPI00066E9880 UniRef100_UPI00066E9880,UniRef50_P94565,UniRef90_A0A3S7GX28 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 6533 7537 . - . GCA_005502385.1_02152_gene GCA_005502385.1_02152 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTKVYYDQSVEKDALQGKKIAIIGYGSQGHAHAQNLKDNGYDVRVGIRPGNSFNKAKEDGLDVYPVAEAVKQADVIMVLLPDEIQGNVYKNEIAPNLEAGNALAFAHGFNIHFNVIEPPKDVDVFLVAPKGPGHLVRRTFVEGSAVPALFGVQQDATGHARDIALSYAKGIGATRAGVIETTFKEETETDLFGEQAVLCGGIHKLIQSGFETLVEAGYQKELAYFEVLHEMKLIVDLMYEGGMENVRYSISNTAEFGDYVSGPRVITPDVKDNMKEVLKDIQNGNFANRFVKDNENGFKEFYELREQQHGHEIEAVGRELRKMMPFIKSKSIQK . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 6533 7537 . - . GCA_005502385.1_02152_mRNA GCA_005502385.1_02152 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTKVYYDQSVEKDALQGKKIAIIGYGSQGHAHAQNLKDNGYDVRVGIRPGNSFNKAKEDGLDVYPVAEAVKQADVIMVLLPDEIQGNVYKNEIAPNLEAGNALAFAHGFNIHFNVIEPPKDVDVFLVAPKGPGHLVRRTFVEGSAVPALFGVQQDATGHARDIALSYAKGIGATRAGVIETTFKEETETDLFGEQAVLCGGIHKLIQSGFETLVEAGYQKELAYFEVLHEMKLIVDLMYEGGMENVRYSISNTAEFGDYVSGPRVITPDVKDNMKEVLKDIQNGNFANRFVKDNENGFKEFYELREQQHGHEIEAVGRELRKMMPFIKSKSIQK . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 6533 7537 . - 0 GCA_005502385.1_02152 GCA_005502385.1_02152_gene,GCA_005502385.1_02152_mRNA GCA_005502385.1_02152 Ketol-acid reductoisomerase (NADP(+)) GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTKVYYDQSVEKDALQGKKIAIIGYGSQGHAHAQNLKDNGYDVRVGIRPGNSFNKAKEDGLDVYPVAEAVKQADVIMVLLPDEIQGNVYKNEIAPNLEAGNALAFAHGFNIHFNVIEPPKDVDVFLVAPKGPGHLVRRTFVEGSAVPALFGVQQDATGHARDIALSYAKGIGATRAGVIETTFKEETETDLFGEQAVLCGGIHKLIQSGFETLVEAGYQKELAYFEVLHEMKLIVDLMYEGGMENVRYSISNTAEFGDYVSGPRVITPDVKDNMKEVLKDIQNGNFANRFVKDNENGFKEFYELREQQHGHEIEAVGRELRKMMPFIKSKSIQK persistent 334 ilvC ketol-acid reductoisomerase 1.1.1.86 GO:0000287,GO:0004455,GO:0005829,GO:0009097,GO:0009099,GO:0050661 COG0059,EH WP_002455079.1 UPI0001EF5030 UniRef100_A0A657ZX23,UniRef50_Q0AV19,UniRef90_Q4L7T9 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 7663 7902 . - . GCA_005502385.1_02153_gene GCA_005502385.1_02153 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNRTLKLKVADQVSTLNRITSAFVRLQYNINELYVKPASEDGISDMTIKVHIEDEDVYRILITKLKKQVSVINVEDVND . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 7663 7902 . - . GCA_005502385.1_02153_mRNA GCA_005502385.1_02153 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNRTLKLKVADQVSTLNRITSAFVRLQYNINELYVKPASEDGISDMTIKVHIEDEDVYRILITKLKKQVSVINVEDVND . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 7663 7902 . - 0 GCA_005502385.1_02153 GCA_005502385.1_02153_gene,GCA_005502385.1_02153_mRNA GCA_005502385.1_02153 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNRTLKLKVADQVSTLNRITSAFVRLQYNINELYVKPASEDGISDMTIKVHIEDEDVYRILITKLKKQVSVINVEDVND persistent 79 ACT domain-containing protein 2.2.1.6 WP_017175291.1 UPI0002E4AC45 UniRef100_A0A4Q9WPF6,UniRef50_A0A7Z8E1T8,UniRef90_A0A7Z8E1T8 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 7899 9617 . - . GCA_005502385.1_02154_gene GCA_005502385.1_02154 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MSKTKESNKQTETLTTRSGSDLLVEALVHEDVDFIFGYPGGAVLPLYDTFYDEKIKHILARHEQGATHAAEGYARVSGKPGVVVVTSGPGATNAITGITDAYCDSLPLVVFTGQVATPGIGKDAFQEADLLSMTTPITKANYQVKHVDDIPRIVHEAFYLANTGRKGPVVIDFPKDMGVLTSSAPLEEKVHLPSYQVTENPNKEDIQQLSQYLNHAKQPVVLAGAGINHSKSNALLTEFVTHHQIPVVTTLLGLGAIPYENPLFLGMGGMHGSYASNMALTECDLLINLGSRFDDRLASNPKEFAPNAKVVHIDIDESEINKVIPTTLGIVADCKKVLEALVTEHQSHATYKEWVDHCLDNKSKHPFKYKEANDTFCRPQEAIEYIGKITNGEAIVTTDVGQHQMWSAQFYPFKHHSQWVTSGGLGTMGFGIPSAIGAQLAAPDKTVICFVGDGGFQMTNQEMALLPEYHLNVKIVLINNGTLGMVKQWQDKFFNQRFSHSVFNDQPDFIKMAEAYGVKSFLIDHPNKLKAQLDEAFNYEGPALIEVRISPAEPVNPMIPSGKANHEMEGLE . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 7899 9617 . - . GCA_005502385.1_02154_mRNA GCA_005502385.1_02154 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MSKTKESNKQTETLTTRSGSDLLVEALVHEDVDFIFGYPGGAVLPLYDTFYDEKIKHILARHEQGATHAAEGYARVSGKPGVVVVTSGPGATNAITGITDAYCDSLPLVVFTGQVATPGIGKDAFQEADLLSMTTPITKANYQVKHVDDIPRIVHEAFYLANTGRKGPVVIDFPKDMGVLTSSAPLEEKVHLPSYQVTENPNKEDIQQLSQYLNHAKQPVVLAGAGINHSKSNALLTEFVTHHQIPVVTTLLGLGAIPYENPLFLGMGGMHGSYASNMALTECDLLINLGSRFDDRLASNPKEFAPNAKVVHIDIDESEINKVIPTTLGIVADCKKVLEALVTEHQSHATYKEWVDHCLDNKSKHPFKYKEANDTFCRPQEAIEYIGKITNGEAIVTTDVGQHQMWSAQFYPFKHHSQWVTSGGLGTMGFGIPSAIGAQLAAPDKTVICFVGDGGFQMTNQEMALLPEYHLNVKIVLINNGTLGMVKQWQDKFFNQRFSHSVFNDQPDFIKMAEAYGVKSFLIDHPNKLKAQLDEAFNYEGPALIEVRISPAEPVNPMIPSGKANHEMEGLE . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 7899 9617 . - 0 GCA_005502385.1_02154 GCA_005502385.1_02154_gene,GCA_005502385.1_02154_mRNA GCA_005502385.1_02154 Acetolactate synthase large subunit GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MSKTKESNKQTETLTTRSGSDLLVEALVHEDVDFIFGYPGGAVLPLYDTFYDEKIKHILARHEQGATHAAEGYARVSGKPGVVVVTSGPGATNAITGITDAYCDSLPLVVFTGQVATPGIGKDAFQEADLLSMTTPITKANYQVKHVDDIPRIVHEAFYLANTGRKGPVVIDFPKDMGVLTSSAPLEEKVHLPSYQVTENPNKEDIQQLSQYLNHAKQPVVLAGAGINHSKSNALLTEFVTHHQIPVVTTLLGLGAIPYENPLFLGMGGMHGSYASNMALTECDLLINLGSRFDDRLASNPKEFAPNAKVVHIDIDESEINKVIPTTLGIVADCKKVLEALVTEHQSHATYKEWVDHCLDNKSKHPFKYKEANDTFCRPQEAIEYIGKITNGEAIVTTDVGQHQMWSAQFYPFKHHSQWVTSGGLGTMGFGIPSAIGAQLAAPDKTVICFVGDGGFQMTNQEMALLPEYHLNVKIVLINNGTLGMVKQWQDKFFNQRFSHSVFNDQPDFIKMAEAYGVKSFLIDHPNKLKAQLDEAFNYEGPALIEVRISPAEPVNPMIPSGKANHEMEGLE persistent 572 ilvB biosynthetic-type acetolactate synthase large subunit 2.2.1.6 GO:0000287,GO:0003984,GO:0009082,GO:0030976,GO:0050660 WP_049434597.1 UPI00066C31BB UniRef100_UPI00066C31BB,UniRef50_Q02137,UniRef90_A0A3S7GZM5 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 9636 11324 . - . GCA_005502385.1_02155_gene GCA_005502385.1_02155 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MRSDMIKKGDHQAPARSLLHATGALKSPTDMNKPFVAICNSYIDIVPGHVHLRELADIAKEAIREAGAIPFEFNTIGVDDGIAMGHIGMRYSLPSREIIADAAEIVINAHWFDGVFYIPNCDKITPGMLLAAVRTNVPAIFCSGGPMKAGLSAQGKALTLSSMFEAVGAFKEGSITKEEFLDMEQNACPTCGSCAGMFTANSMNCLMEVLGLALPYNGTALAVSDQRREMIRQAAFQLVENIKNDIKPRDIVTKEAIDDAFALDMAMGGSTNTVLHTLAIANEAGIEYDLERINEIAKKTPYLSKIAPSSSYSMHDVHEAGGCPAIINELMKKEGTLHPDRLTVTGKTLRENNQGKEIKNFDVIHSLDAPYDKEGGLSVLFGNIAPKGAVIKVGGVDPSIKVFKGKAICFDSHDAAVEAIDNKTVREGHVVVIRYEGPKGGPGMPEMLAPTSSIVGRGLGKDVALITDGRFSGATRGIAVGHISPEAASGGPIGLIRDGDEITIDLVNRTLDVNQPQEELYKRKEELEPFKAKVKTGYLARYTALVTSANTGGIMQVPENLI . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 9636 11324 . - . GCA_005502385.1_02155_mRNA GCA_005502385.1_02155 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MRSDMIKKGDHQAPARSLLHATGALKSPTDMNKPFVAICNSYIDIVPGHVHLRELADIAKEAIREAGAIPFEFNTIGVDDGIAMGHIGMRYSLPSREIIADAAEIVINAHWFDGVFYIPNCDKITPGMLLAAVRTNVPAIFCSGGPMKAGLSAQGKALTLSSMFEAVGAFKEGSITKEEFLDMEQNACPTCGSCAGMFTANSMNCLMEVLGLALPYNGTALAVSDQRREMIRQAAFQLVENIKNDIKPRDIVTKEAIDDAFALDMAMGGSTNTVLHTLAIANEAGIEYDLERINEIAKKTPYLSKIAPSSSYSMHDVHEAGGCPAIINELMKKEGTLHPDRLTVTGKTLRENNQGKEIKNFDVIHSLDAPYDKEGGLSVLFGNIAPKGAVIKVGGVDPSIKVFKGKAICFDSHDAAVEAIDNKTVREGHVVVIRYEGPKGGPGMPEMLAPTSSIVGRGLGKDVALITDGRFSGATRGIAVGHISPEAASGGPIGLIRDGDEITIDLVNRTLDVNQPQEELYKRKEELEPFKAKVKTGYLARYTALVTSANTGGIMQVPENLI . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 9636 11324 . - 0 GCA_005502385.1_02155 GCA_005502385.1_02155_gene,GCA_005502385.1_02155_mRNA GCA_005502385.1_02155 Dihydroxy-acid dehydratase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MRSDMIKKGDHQAPARSLLHATGALKSPTDMNKPFVAICNSYIDIVPGHVHLRELADIAKEAIREAGAIPFEFNTIGVDDGIAMGHIGMRYSLPSREIIADAAEIVINAHWFDGVFYIPNCDKITPGMLLAAVRTNVPAIFCSGGPMKAGLSAQGKALTLSSMFEAVGAFKEGSITKEEFLDMEQNACPTCGSCAGMFTANSMNCLMEVLGLALPYNGTALAVSDQRREMIRQAAFQLVENIKNDIKPRDIVTKEAIDDAFALDMAMGGSTNTVLHTLAIANEAGIEYDLERINEIAKKTPYLSKIAPSSSYSMHDVHEAGGCPAIINELMKKEGTLHPDRLTVTGKTLRENNQGKEIKNFDVIHSLDAPYDKEGGLSVLFGNIAPKGAVIKVGGVDPSIKVFKGKAICFDSHDAAVEAIDNKTVREGHVVVIRYEGPKGGPGMPEMLAPTSSIVGRGLGKDVALITDGRFSGATRGIAVGHISPEAASGGPIGLIRDGDEITIDLVNRTLDVNQPQEELYKRKEELEPFKAKVKTGYLARYTALVTSANTGGIMQVPENLI persistent 562 ilvD dihydroxy-acid dehydratase 4.2.1.9 GO:0000287,GO:0004160,GO:0005829,GO:0009082,GO:0009097,GO:0009099,GO:0051536,GO:0051537 COG0129,EG UniRef50_Q2FWK7,UniRef90_Q2FWK7 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 11389 11589 . - . GCA_005502385.1_02156_gene GCA_005502385.1_02156 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 11389 11589 . - . GCA_005502385.1_02156_mRNA GCA_005502385.1_02156 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 . . . . . . . GCA_005502385.1|SCOV01000009.1 Infernal:001001 misc_RNA 11389 11589 108.4 - . GCA_005502385.1_02156 GCA_005502385.1_02156_gene,GCA_005502385.1_02156_mRNA GCA_005502385.1_02156 rli60 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 11767 12228 . + . GCA_005502385.1_02157_gene GCA_005502385.1_02157 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MIPIKNLDEMEHFAKILMKHVGSKDVILLNGDLGAGKTTLTQFIGKYLGVKRNINSPTFNIIKSYKGKELKLHHMDCYRLEDSDEDLGFNEYFEDDAVTIIEWSQFIQEFLPEEYLVINITTINENQRQINIAAKGYHYTKIKEEIDNELTVN . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 11767 12228 . + . GCA_005502385.1_02157_mRNA GCA_005502385.1_02157 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MIPIKNLDEMEHFAKILMKHVGSKDVILLNGDLGAGKTTLTQFIGKYLGVKRNINSPTFNIIKSYKGKELKLHHMDCYRLEDSDEDLGFNEYFEDDAVTIIEWSQFIQEFLPEEYLVINITTINENQRQINIAAKGYHYTKIKEEIDNELTVN . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 11767 12228 . + 0 GCA_005502385.1_02157 GCA_005502385.1_02157_gene,GCA_005502385.1_02157_mRNA GCA_005502385.1_02157 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MIPIKNLDEMEHFAKILMKHVGSKDVILLNGDLGAGKTTLTQFIGKYLGVKRNINSPTFNIIKSYKGKELKLHHMDCYRLEDSDEDLGFNEYFEDDAVTIIEWSQFIQEFLPEEYLVINITTINENQRQINIAAKGYHYTKIKEEIDNELTVN persistent 153 tsaE tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE GO:0002949 WP_002448263.1 UPI00019FCA4C UniRef100_A0A6N0I1G9,UniRef50_A0A291JJR3,UniRef90_A0A6N0I1G9 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 12209 12874 . + . GCA_005502385.1_02158_gene GCA_005502385.1_02158 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNLLLIDTSNQPMSIALMNDDEVLAIKTTNSKKDHSSQLMPGIQSLFNESNLKKQELDGIVVAKGPGSYTGVRIGVTVAKTLAYALNTKLYGVSSLKALAATIDTNDKRIIVPIFDARRQAVYTGLYQYENNQLNTIEKDQYISLEALHKKLNALNQPYVFVGEDTEKISELLHGDIETKLPNATVMKHLIHQPENIHTFVPNYIKLSEAERNWLNQQKNS . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 12209 12874 . + . GCA_005502385.1_02158_mRNA GCA_005502385.1_02158 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNLLLIDTSNQPMSIALMNDDEVLAIKTTNSKKDHSSQLMPGIQSLFNESNLKKQELDGIVVAKGPGSYTGVRIGVTVAKTLAYALNTKLYGVSSLKALAATIDTNDKRIIVPIFDARRQAVYTGLYQYENNQLNTIEKDQYISLEALHKKLNALNQPYVFVGEDTEKISELLHGDIETKLPNATVMKHLIHQPENIHTFVPNYIKLSEAERNWLNQQKNS . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 12209 12874 . + 0 GCA_005502385.1_02158 GCA_005502385.1_02158_gene,GCA_005502385.1_02158_mRNA GCA_005502385.1_02158 tRNA threonylcarbamoyladenosine biosynthesis protein TsaB GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNLLLIDTSNQPMSIALMNDDEVLAIKTTNSKKDHSSQLMPGIQSLFNESNLKKQELDGIVVAKGPGSYTGVRIGVTVAKTLAYALNTKLYGVSSLKALAATIDTNDKRIIVPIFDARRQAVYTGLYQYENNQLNTIEKDQYISLEALHKKLNALNQPYVFVGEDTEKISELLHGDIETKLPNATVMKHLIHQPENIHTFVPNYIKLSEAERNWLNQQKNS persistent 221 tsaB tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB 2.3.1.234 GO:0002949 WP_019835767.1 UPI0003600514 UniRef100_UPI0003600514,UniRef50_A0AAE2ZX37,UniRef90_A0A3S7GWV1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 12847 13311 . + . GCA_005502385.1_02159_gene GCA_005502385.1_02159 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MVKPTEEQLTIRAMQVDDVPSVFDIERESFNDSSWTIDAFYHELNENNFAKYFVVIFQEEIIGYLGLWIVIDQAQITTIAIKESFRDYGLGQLLLNYVMDYARHTCDVMSLEVRITNVIAQHVYKKLGFQYGGKRKNYYGEGEDALVMWVNLNE . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 12847 13311 . + . GCA_005502385.1_02159_mRNA GCA_005502385.1_02159 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MVKPTEEQLTIRAMQVDDVPSVFDIERESFNDSSWTIDAFYHELNENNFAKYFVVIFQEEIIGYLGLWIVIDQAQITTIAIKESFRDYGLGQLLLNYVMDYARHTCDVMSLEVRITNVIAQHVYKKLGFQYGGKRKNYYGEGEDALVMWVNLNE . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 12847 13311 . + 0 GCA_005502385.1_02159 GCA_005502385.1_02159_gene,GCA_005502385.1_02159_mRNA GCA_005502385.1_02159 N-alpha-acetyltransferase RimI GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MVKPTEEQLTIRAMQVDDVPSVFDIERESFNDSSWTIDAFYHELNENNFAKYFVVIFQEEIIGYLGLWIVIDQAQITTIAIKESFRDYGLGQLLLNYVMDYARHTCDVMSLEVRITNVIAQHVYKKLGFQYGGKRKNYYGEGEDALVMWVNLNE persistent 154 rimI ribosomal protein S18-alanine N-acetyltransferase 2.3.1.266 GO:0008999,GO:0036211,GO:0042254 WP_002448286.1 UPI00019FCA4A UniRef100_A0A4Q9WPG8,UniRef50_A0A855GHV1,UniRef90_A0A4Q9WPG8 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 13304 14329 . + . GCA_005502385.1_02160_gene GCA_005502385.1_02160 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNRDILILAVETSCDETSVSVIKNGNTILSNIVLSQIESHKRFGGVVPEVASRHHVEGITTTIDEALSSANATMEDIDAVAVTQGPGLIGALLIGINAAKALAFAYNKPIIPVHHIAGHIYANHLEEPLTFPLIALIVSGGHTELVYMKSHLNFEVIGETRDDAVGEAYDKVARTIDLPYPGGPAIDALALEGKDTYHFPRVWLEKDSYDFSFSGLKSAVINKLHNQRQKNEDIKKEDVATSFQNSVVDVLSTKAINACKSYHVEHLIVAGGVASNKGLRERLNHLCKENNIKLSIPNSKLCTDNAAMIGAAGYYYYKAGVTSSLDLNGKNNIDIEDVTVE . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 13304 14329 . + . GCA_005502385.1_02160_mRNA GCA_005502385.1_02160 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNRDILILAVETSCDETSVSVIKNGNTILSNIVLSQIESHKRFGGVVPEVASRHHVEGITTTIDEALSSANATMEDIDAVAVTQGPGLIGALLIGINAAKALAFAYNKPIIPVHHIAGHIYANHLEEPLTFPLIALIVSGGHTELVYMKSHLNFEVIGETRDDAVGEAYDKVARTIDLPYPGGPAIDALALEGKDTYHFPRVWLEKDSYDFSFSGLKSAVINKLHNQRQKNEDIKKEDVATSFQNSVVDVLSTKAINACKSYHVEHLIVAGGVASNKGLRERLNHLCKENNIKLSIPNSKLCTDNAAMIGAAGYYYYKAGVTSSLDLNGKNNIDIEDVTVE . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 13304 14329 . + 0 GCA_005502385.1_02160 GCA_005502385.1_02160_gene,GCA_005502385.1_02160_mRNA GCA_005502385.1_02160 tRNA N6-adenosine threonylcarbamoyltransferase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNRDILILAVETSCDETSVSVIKNGNTILSNIVLSQIESHKRFGGVVPEVASRHHVEGITTTIDEALSSANATMEDIDAVAVTQGPGLIGALLIGINAAKALAFAYNKPIIPVHHIAGHIYANHLEEPLTFPLIALIVSGGHTELVYMKSHLNFEVIGETRDDAVGEAYDKVARTIDLPYPGGPAIDALALEGKDTYHFPRVWLEKDSYDFSFSGLKSAVINKLHNQRQKNEDIKKEDVATSFQNSVVDVLSTKAINACKSYHVEHLIVAGGVASNKGLRERLNHLCKENNIKLSIPNSKLCTDNAAMIGAAGYYYYKAGVTSSLDLNGKNNIDIEDVTVE persistent 341 tsaD tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD 2.3.1.234 GO:0002949 WP_019835766.1 UPI0003774F32 UniRef100_A0A8I0W8T3,UniRef50_Q2FWL2,UniRef90_A0A8X8GPZ4 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 14667 16604 . - . GCA_005502385.1_02161_gene GCA_005502385.1_02161 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MILLQLNDISKSFDGEDIFNHVNFEVKTGERIGVVGRNGAGKSTLMKIIAGVEDYDSGHISKIKNLRIGYLTQQMTLDSSLTVIEEMSKPFEHIKHMETLINDETDWLAAHVDSYDSEDYKQHMERYESLSNQFEQLEGYQYESKIKTVLHGLNFTEEEFDKPINDFSGGQKTRLSLAQMLLSEPDLLLLDEPTNHLDLETTKWLEDYLKYFKGAIIIISHDRYFLDKIVTQIYDVSLGDVKRYVGNYEQFITQRDKYYELRMQEYEKQQEEIKRLETFVEKNITRASTSGMAKSRRKTLEKMERIDKPMMDAKSANIQFGFDRNTGNDVMHIRNLEVGYQSPITAPINIEVTKGDHIAIIGPNGVGKTTLIKTIANRQKALGGEITYGANLNIGYYDQKQAEFKSNKTILDYVWDQYPMMNEKDVRAILGRFLFVQDDVKKVINDLSGGEKARLQLALLMLQRDNVLILDEPTNHLDIDSKEMLEQALKDFEGTILFVSHDRYFINQLANKVFDLNKDGGQLYLGDYQYFIEKTEEASALKEFEAEHNKDETLDLEDTDSSTTNTYASQKQYKRELRKIERQIEQCEEQIEKYEEQITQIDQQLTQPDIFNDPIKANELAEQKLSTERQLENVMAEWEELQEKI . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 14667 16604 . - . GCA_005502385.1_02161_mRNA GCA_005502385.1_02161 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MILLQLNDISKSFDGEDIFNHVNFEVKTGERIGVVGRNGAGKSTLMKIIAGVEDYDSGHISKIKNLRIGYLTQQMTLDSSLTVIEEMSKPFEHIKHMETLINDETDWLAAHVDSYDSEDYKQHMERYESLSNQFEQLEGYQYESKIKTVLHGLNFTEEEFDKPINDFSGGQKTRLSLAQMLLSEPDLLLLDEPTNHLDLETTKWLEDYLKYFKGAIIIISHDRYFLDKIVTQIYDVSLGDVKRYVGNYEQFITQRDKYYELRMQEYEKQQEEIKRLETFVEKNITRASTSGMAKSRRKTLEKMERIDKPMMDAKSANIQFGFDRNTGNDVMHIRNLEVGYQSPITAPINIEVTKGDHIAIIGPNGVGKTTLIKTIANRQKALGGEITYGANLNIGYYDQKQAEFKSNKTILDYVWDQYPMMNEKDVRAILGRFLFVQDDVKKVINDLSGGEKARLQLALLMLQRDNVLILDEPTNHLDIDSKEMLEQALKDFEGTILFVSHDRYFINQLANKVFDLNKDGGQLYLGDYQYFIEKTEEASALKEFEAEHNKDETLDLEDTDSSTTNTYASQKQYKRELRKIERQIEQCEEQIEKYEEQITQIDQQLTQPDIFNDPIKANELAEQKLSTERQLENVMAEWEELQEKI . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 14667 16604 . - 0 GCA_005502385.1_02161 GCA_005502385.1_02161_gene,GCA_005502385.1_02161_mRNA GCA_005502385.1_02161 putative ABC transporter ATP-binding protein YheS GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MILLQLNDISKSFDGEDIFNHVNFEVKTGERIGVVGRNGAGKSTLMKIIAGVEDYDSGHISKIKNLRIGYLTQQMTLDSSLTVIEEMSKPFEHIKHMETLINDETDWLAAHVDSYDSEDYKQHMERYESLSNQFEQLEGYQYESKIKTVLHGLNFTEEEFDKPINDFSGGQKTRLSLAQMLLSEPDLLLLDEPTNHLDLETTKWLEDYLKYFKGAIIIISHDRYFLDKIVTQIYDVSLGDVKRYVGNYEQFITQRDKYYELRMQEYEKQQEEIKRLETFVEKNITRASTSGMAKSRRKTLEKMERIDKPMMDAKSANIQFGFDRNTGNDVMHIRNLEVGYQSPITAPINIEVTKGDHIAIIGPNGVGKTTLIKTIANRQKALGGEITYGANLNIGYYDQKQAEFKSNKTILDYVWDQYPMMNEKDVRAILGRFLFVQDDVKKVINDLSGGEKARLQLALLMLQRDNVLILDEPTNHLDIDSKEMLEQALKDFEGTILFVSHDRYFINQLANKVFDLNKDGGQLYLGDYQYFIEKTEEASALKEFEAEHNKDETLDLEDTDSSTTNTYASQKQYKRELRKIERQIEQCEEQIEKYEEQITQIDQQLTQPDIFNDPIKANELAEQKLSTERQLENVMAEWEELQEKI persistent 645 abc-f ribosomal protection-like ABC-F family protein GO:0003677,GO:0005524,GO:0016887 UniRef50_A0A131I335,UniRef90_A0A3S7GXA3 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 16850 17488 . + . GCA_005502385.1_02162_gene GCA_005502385.1_02162 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MPQNQSKIPRATLKRLPLYYRFVNSLKIKGIDRVSSKTISEALDIESATIRRDFSYFGELGKKGYGYNVESLLEFFKTEISDSNNIHIAIVGVGNLGRALLTYNFSIHDEMTITAAFDIDKDIVGTKVGKVTVKHIDDISSELQKQNINVVILTTPGSVAQSVSDRLIKADVKGILNFTPARIDVPNDVQVHHIDLGIELQSLLFFMKNSSN . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 16850 17488 . + . GCA_005502385.1_02162_mRNA GCA_005502385.1_02162 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MPQNQSKIPRATLKRLPLYYRFVNSLKIKGIDRVSSKTISEALDIESATIRRDFSYFGELGKKGYGYNVESLLEFFKTEISDSNNIHIAIVGVGNLGRALLTYNFSIHDEMTITAAFDIDKDIVGTKVGKVTVKHIDDISSELQKQNINVVILTTPGSVAQSVSDRLIKADVKGILNFTPARIDVPNDVQVHHIDLGIELQSLLFFMKNSSN . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 16850 17488 . + 0 GCA_005502385.1_02162 GCA_005502385.1_02162_gene,GCA_005502385.1_02162_mRNA GCA_005502385.1_02162 Redox-sensing transcriptional repressor Rex GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MPQNQSKIPRATLKRLPLYYRFVNSLKIKGIDRVSSKTISEALDIESATIRRDFSYFGELGKKGYGYNVESLLEFFKTEISDSNNIHIAIVGVGNLGRALLTYNFSIHDEMTITAAFDIDKDIVGTKVGKVTVKHIDDISSELQKQNINVVILTTPGSVAQSVSDRLIKADVKGILNFTPARIDVPNDVQVHHIDLGIELQSLLFFMKNSSN persistent 212 redox-sensing transcriptional repressor Rex WP_017175284.1 UPI00030DEDB0 UniRef100_A0A1L8Y8I5,UniRef50_Q2FWL6,UniRef90_A0A1L8Y8I5 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 17555 17713 . + . GCA_005502385.1_02163_gene GCA_005502385.1_02163 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 METLKNGDELKIDFDCTQATEAIPNWAAEQGYPVTNYEQLDDASWTITVQKA . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 17555 17713 . + . GCA_005502385.1_02163_mRNA GCA_005502385.1_02163 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 METLKNGDELKIDFDCTQATEAIPNWAAEQGYPVTNYEQLDDASWTITVQKA . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 17555 17713 . + 0 GCA_005502385.1_02163 GCA_005502385.1_02163_gene,GCA_005502385.1_02163_mRNA GCA_005502385.1_02163 Putative sulfur carrier protein YeeD GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 METLKNGDELKIDFDCTQATEAIPNWAAEQGYPVTNYEQLDDASWTITVQKA persistent 52 tusA sulfurtransferase TusA family protein UniRef50_UPI0008A8DBF1,UniRef90_UPI0008A8DBF1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 17823 19067 . + . GCA_005502385.1_02164_gene GCA_005502385.1_02164 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKMDDTIFLFLCILLVWLMTPGLSLFYGGLVQSKNVLNTVMQSMAAIIIVTFTWVVIGFSLSFGHGNDWIGNFDFIGLQHVGFNTNVQFSPHIPFALFMLFQMMFCTIAVSILSGSIAERMRFIPFTIFIFIWVIMIYSPVAHWVWGGGWIQQLDALDYAGGTVVHITSGVSGLVLAIMIGHGKKVEKLQPNNLLITLIGGIFVWIGWYGFNTGSAFTLNDIAVISFVNTIIAASGGAFSWLILEYFSNKKLSLLGLLSGVLSGLVTITPAAGFVNYLSAYIISMIGGIACYFVVNSIKEKLRYNDTLDAFGIHGVGGVIGAILTGVFQSHKVNKDILDGLIYTGHLHTIWIQCIAVIVVVLYSIIITFIIGKTLSIFMSLATTVEEDKTGLDQLVHGEKAYFYGELNKLHKRY . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 17823 19067 . + . GCA_005502385.1_02164_mRNA GCA_005502385.1_02164 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKMDDTIFLFLCILLVWLMTPGLSLFYGGLVQSKNVLNTVMQSMAAIIIVTFTWVVIGFSLSFGHGNDWIGNFDFIGLQHVGFNTNVQFSPHIPFALFMLFQMMFCTIAVSILSGSIAERMRFIPFTIFIFIWVIMIYSPVAHWVWGGGWIQQLDALDYAGGTVVHITSGVSGLVLAIMIGHGKKVEKLQPNNLLITLIGGIFVWIGWYGFNTGSAFTLNDIAVISFVNTIIAASGGAFSWLILEYFSNKKLSLLGLLSGVLSGLVTITPAAGFVNYLSAYIISMIGGIACYFVVNSIKEKLRYNDTLDAFGIHGVGGVIGAILTGVFQSHKVNKDILDGLIYTGHLHTIWIQCIAVIVVVLYSIIITFIIGKTLSIFMSLATTVEEDKTGLDQLVHGEKAYFYGELNKLHKRY . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 17823 19067 . + 0 GCA_005502385.1_02164 GCA_005502385.1_02164_gene,GCA_005502385.1_02164_mRNA GCA_005502385.1_02164 Ammonium transporter GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKMDDTIFLFLCILLVWLMTPGLSLFYGGLVQSKNVLNTVMQSMAAIIIVTFTWVVIGFSLSFGHGNDWIGNFDFIGLQHVGFNTNVQFSPHIPFALFMLFQMMFCTIAVSILSGSIAERMRFIPFTIFIFIWVIMIYSPVAHWVWGGGWIQQLDALDYAGGTVVHITSGVSGLVLAIMIGHGKKVEKLQPNNLLITLIGGIFVWIGWYGFNTGSAFTLNDIAVISFVNTIIAASGGAFSWLILEYFSNKKLSLLGLLSGVLSGLVTITPAAGFVNYLSAYIISMIGGIACYFVVNSIKEKLRYNDTLDAFGIHGVGGVIGAILTGVFQSHKVNKDILDGLIYTGHLHTIWIQCIAVIVVVLYSIIITFIIGKTLSIFMSLATTVEEDKTGLDQLVHGEKAYFYGELNKLHKRY persistent 414 Ammonium transporter WP_019835521.1 UPI000372C770 UniRef100_UPI000372C770,UniRef50_A0A0D0SEH5,UniRef90_A0A3S7GXA4 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 19323 20810 . + . GCA_005502385.1_02165_gene GCA_005502385.1_02165 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTEWSREQRYRRIEDVNKDELEALKHRIEQSSYRQHFHIQPETGLLNDPNGLMFYNGTYYVSHQWFPLGAVHGLKYWFNYTSKDLVTFEPNGPILKPDTIYDSHGVYSGSAFEFEGNLYYMYTGNHRDEEWKRYASQMIAKVKQDGSIEKLNKPVIAHQPEGYTSHFRDPKVFKYHEEYYAILSVQTQQELGRLLLYKMIHRQIDQWEYIGEITTELEDFGYMWECPDYFSLNGQDVIIFSPQGIDAKDEKYRNIYQSGYLIGHLNFDTLEFKHDTFMELDNGFDFYAPQTFIDEYGKRILIGWMGLPDTQYPTDEEGWAHCLTIPRELTIEEGRLRQRPLKALETLRQNKETALGYANKYNTTLHPYEGTQYELIIDILENEATEIYFELRASKLNSTLISYNTREQKITLDRSESGALPSNVEGVTRSTYLDSPLKQLHIFVDTSSIEIFCNDGERVLTSRIFPDENATAIRTSTETGQVYLKFTKYDLGRDK . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 19323 20810 . + . GCA_005502385.1_02165_mRNA GCA_005502385.1_02165 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTEWSREQRYRRIEDVNKDELEALKHRIEQSSYRQHFHIQPETGLLNDPNGLMFYNGTYYVSHQWFPLGAVHGLKYWFNYTSKDLVTFEPNGPILKPDTIYDSHGVYSGSAFEFEGNLYYMYTGNHRDEEWKRYASQMIAKVKQDGSIEKLNKPVIAHQPEGYTSHFRDPKVFKYHEEYYAILSVQTQQELGRLLLYKMIHRQIDQWEYIGEITTELEDFGYMWECPDYFSLNGQDVIIFSPQGIDAKDEKYRNIYQSGYLIGHLNFDTLEFKHDTFMELDNGFDFYAPQTFIDEYGKRILIGWMGLPDTQYPTDEEGWAHCLTIPRELTIEEGRLRQRPLKALETLRQNKETALGYANKYNTTLHPYEGTQYELIIDILENEATEIYFELRASKLNSTLISYNTREQKITLDRSESGALPSNVEGVTRSTYLDSPLKQLHIFVDTSSIEIFCNDGERVLTSRIFPDENATAIRTSTETGQVYLKFTKYDLGRDK . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 19323 20810 . + 0 GCA_005502385.1_02165 GCA_005502385.1_02165_gene,GCA_005502385.1_02165_mRNA GCA_005502385.1_02165 Sucrose-6-phosphate hydrolase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTEWSREQRYRRIEDVNKDELEALKHRIEQSSYRQHFHIQPETGLLNDPNGLMFYNGTYYVSHQWFPLGAVHGLKYWFNYTSKDLVTFEPNGPILKPDTIYDSHGVYSGSAFEFEGNLYYMYTGNHRDEEWKRYASQMIAKVKQDGSIEKLNKPVIAHQPEGYTSHFRDPKVFKYHEEYYAILSVQTQQELGRLLLYKMIHRQIDQWEYIGEITTELEDFGYMWECPDYFSLNGQDVIIFSPQGIDAKDEKYRNIYQSGYLIGHLNFDTLEFKHDTFMELDNGFDFYAPQTFIDEYGKRILIGWMGLPDTQYPTDEEGWAHCLTIPRELTIEEGRLRQRPLKALETLRQNKETALGYANKYNTTLHPYEGTQYELIIDILENEATEIYFELRASKLNSTLISYNTREQKITLDRSESGALPSNVEGVTRSTYLDSPLKQLHIFVDTSSIEIFCNDGERVLTSRIFPDENATAIRTSTETGQVYLKFTKYDLGRDK persistent 495 Sucrose-6-phosphate hydrolase UniRef50_Q05936,UniRef90_A0A6N0I1P3 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 20811 21770 . + . GCA_005502385.1_02166_gene GCA_005502385.1_02166 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MRKLYAIGEALIDFIPNRTNIELKDVTQFSRQVGGAPANVASVAKKLGSRTEMVTQLGNDAFGDIIIETLEKIGVGTTYIKRTNTANTALAFVSLKENGERDFSFYRKPSADMLYHASNLDEINVSNQDVLHFCSVDLIECDMKNAHLAMIEKFEAAHGMIVFDPNVRLPLWDSAEACKVTIQSFLPKANIIKISDEEIEFVTGISDEHKAIQSLFKGNVEVVIYTQGDKGATAYLKDGTIIHHQGYKVEAVDTTGAGDAFIGAVINRILNTELTDITSLFKGKGEEILKFSNLVAAKVTTKYGAIESIPSLEEVIEEL . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 20811 21770 . + . GCA_005502385.1_02166_mRNA GCA_005502385.1_02166 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MRKLYAIGEALIDFIPNRTNIELKDVTQFSRQVGGAPANVASVAKKLGSRTEMVTQLGNDAFGDIIIETLEKIGVGTTYIKRTNTANTALAFVSLKENGERDFSFYRKPSADMLYHASNLDEINVSNQDVLHFCSVDLIECDMKNAHLAMIEKFEAAHGMIVFDPNVRLPLWDSAEACKVTIQSFLPKANIIKISDEEIEFVTGISDEHKAIQSLFKGNVEVVIYTQGDKGATAYLKDGTIIHHQGYKVEAVDTTGAGDAFIGAVINRILNTELTDITSLFKGKGEEILKFSNLVAAKVTTKYGAIESIPSLEEVIEEL . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 20811 21770 . + 0 GCA_005502385.1_02166 GCA_005502385.1_02166_gene,GCA_005502385.1_02166_mRNA GCA_005502385.1_02166 Fructokinase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MRKLYAIGEALIDFIPNRTNIELKDVTQFSRQVGGAPANVASVAKKLGSRTEMVTQLGNDAFGDIIIETLEKIGVGTTYIKRTNTANTALAFVSLKENGERDFSFYRKPSADMLYHASNLDEINVSNQDVLHFCSVDLIECDMKNAHLAMIEKFEAAHGMIVFDPNVRLPLWDSAEACKVTIQSFLPKANIIKISDEEIEFVTGISDEHKAIQSLFKGNVEVVIYTQGDKGATAYLKDGTIIHHQGYKVEAVDTTGAGDAFIGAVINRILNTELTDITSLFKGKGEEILKFSNLVAAKVTTKYGAIESIPSLEEVIEEL persistent 319 Carbohydrate kinase WP_070436466.1 UPI0008A1967F UniRef100_UPI0008A1967F,UniRef50_A0A380G6X2,UniRef90_A0A3S7H0I2 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 21821 22537 . - . GCA_005502385.1_02167_gene GCA_005502385.1_02167 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKIFICEDDVKQRENMVSIINNYIMIEEKPMEIALATDDPYEIIEQSKEMNDVGCYFLDIQLEADINGIKLGSEIRKYDPIGNIIFVTSHSELTYLTFVYKVSAMDFIFKDDPNQLKTRIIDCIETAHTRLKLLSKESNVETIELKRGSNSIYVQYDDVMFFESSTKSHRLIAHLDNRQIEFYGNLKELAQLDDRFFRCHNSFVVNRHNIDSVDSKERIVTFRNGEHCYASVRNVKKI . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 21821 22537 . - . GCA_005502385.1_02167_mRNA GCA_005502385.1_02167 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKIFICEDDVKQRENMVSIINNYIMIEEKPMEIALATDDPYEIIEQSKEMNDVGCYFLDIQLEADINGIKLGSEIRKYDPIGNIIFVTSHSELTYLTFVYKVSAMDFIFKDDPNQLKTRIIDCIETAHTRLKLLSKESNVETIELKRGSNSIYVQYDDVMFFESSTKSHRLIAHLDNRQIEFYGNLKELAQLDDRFFRCHNSFVVNRHNIDSVDSKERIVTFRNGEHCYASVRNVKKI . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 21821 22537 . - 0 GCA_005502385.1_02167 GCA_005502385.1_02167_gene,GCA_005502385.1_02167_mRNA GCA_005502385.1_02167 Accessory gene regulator protein A GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKIFICEDDVKQRENMVSIINNYIMIEEKPMEIALATDDPYEIIEQSKEMNDVGCYFLDIQLEADINGIKLGSEIRKYDPIGNIIFVTSHSELTYLTFVYKVSAMDFIFKDDPNQLKTRIIDCIETAHTRLKLLSKESNVETIELKRGSNSIYVQYDDVMFFESSTKSHRLIAHLDNRQIEFYGNLKELAQLDDRFFRCHNSFVVNRHNIDSVDSKERIVTFRNGEHCYASVRNVKKI persistent 238 agrA quorum-sensing response regulator AgrA COG3279,KT WP_002455088.1 UPI0001EF5039 UniRef100_A0A1L8Y8C4,UniRef50_Q5HMY2,UniRef90_A0A1B1M0S9 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 22550 23839 . - . GCA_005502385.1_02168_gene GCA_005502385.1_02168 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MDLLSNVPLALFQGFLLFLISKIILDIKYTLRDYLIILTIIIPSAFFYYYLGSISVLYLLIGCGIFLYCKVKWYSIITVLSSAILMFLSNFIAFILVIIFQKFINNNTYLDLSYISIFTLVSILISFTFKSLLKKLKMSYLSINKTYLTIISIVLILSFIILYIYSQVPKVNNASLKIYGLIFIGIIIFFITLIIIISRYTLRELRYRRNMEEIETYYEYTLQIESINNEMRKFRHDYVNILTTMSEYIRENDMDGLKTYFNDNIVPMKDNLQMNSIKINGTDNLKVRAIKGLITTKILQAQEKNIPISIEVPELIDHIEMNTVDLSRIIGIIIDNAIEASEELEDALIRIAFINVETSVMFIVMNKCKEDMPKIHELFQDSFSTKGDNRGLGLTTLKEITDTTENVLLDTTIENGYFVQKVEIINNMP . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 22550 23839 . - . GCA_005502385.1_02168_mRNA GCA_005502385.1_02168 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MDLLSNVPLALFQGFLLFLISKIILDIKYTLRDYLIILTIIIPSAFFYYYLGSISVLYLLIGCGIFLYCKVKWYSIITVLSSAILMFLSNFIAFILVIIFQKFINNNTYLDLSYISIFTLVSILISFTFKSLLKKLKMSYLSINKTYLTIISIVLILSFIILYIYSQVPKVNNASLKIYGLIFIGIIIFFITLIIIISRYTLRELRYRRNMEEIETYYEYTLQIESINNEMRKFRHDYVNILTTMSEYIRENDMDGLKTYFNDNIVPMKDNLQMNSIKINGTDNLKVRAIKGLITTKILQAQEKNIPISIEVPELIDHIEMNTVDLSRIIGIIIDNAIEASEELEDALIRIAFINVETSVMFIVMNKCKEDMPKIHELFQDSFSTKGDNRGLGLTTLKEITDTTENVLLDTTIENGYFVQKVEIINNMP . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 22550 23839 . - 0 GCA_005502385.1_02168 GCA_005502385.1_02168_gene,GCA_005502385.1_02168_mRNA GCA_005502385.1_02168 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MDLLSNVPLALFQGFLLFLISKIILDIKYTLRDYLIILTIIIPSAFFYYYLGSISVLYLLIGCGIFLYCKVKWYSIITVLSSAILMFLSNFIAFILVIIFQKFINNNTYLDLSYISIFTLVSILISFTFKSLLKKLKMSYLSINKTYLTIISIVLILSFIILYIYSQVPKVNNASLKIYGLIFIGIIIFFITLIIIISRYTLRELRYRRNMEEIETYYEYTLQIESINNEMRKFRHDYVNILTTMSEYIRENDMDGLKTYFNDNIVPMKDNLQMNSIKINGTDNLKVRAIKGLITTKILQAQEKNIPISIEVPELIDHIEMNTVDLSRIIGIIIDNAIEASEELEDALIRIAFINVETSVMFIVMNKCKEDMPKIHELFQDSFSTKGDNRGLGLTTLKEITDTTENVLLDTTIENGYFVQKVEIINNMP persistent 429 agrC quorum-sensing sensor histidine kinase AgrC 2.7.13.3 WP_049382327.1 UPI00066B92ED UniRef100_A0A6N0I1G1,UniRef50_A0A380HKB8,UniRef90_A0A6N0I1G1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 23861 24001 . - . GCA_005502385.1_02169_gene GCA_005502385.1_02169 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTFITDLFIKLFSLILETVGTLASYNVCGGYFDEPEVPKELTDLNR . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 23861 24001 . - . GCA_005502385.1_02169_mRNA GCA_005502385.1_02169 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTFITDLFIKLFSLILETVGTLASYNVCGGYFDEPEVPKELTDLNR . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 23861 24001 . - 0 GCA_005502385.1_02169 GCA_005502385.1_02169_gene,GCA_005502385.1_02169_mRNA GCA_005502385.1_02169 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTFITDLFIKLFSLILETVGTLASYNVCGGYFDEPEVPKELTDLNR persistent 46 Cyclic lactone autoinducer peptide WP_002488089.1 UPI00024E2008 UniRef100_A0A657M3E8,UniRef50_A0A7X9ZJ38,UniRef90_A0A657M3E8 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 24004 24570 . - . GCA_005502385.1_02170_gene GCA_005502385.1_02170 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKAIDDKIEHFASYLQKKNNLDHIQFLKVRLGMQVVVSNIAKTIVTYGAALIFHTFLYTLITHISYFLIRHNAHGAHAKSTLLCHIQNLILFVGLPWLIAYYHINMGIMYSVSGLALLLIIIYAPAATKKQPIPERLKPRKKIKSIILVVVLIIISIIVPEPYKQLILLGMILESTTLLPFFFPKEDY . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 24004 24570 . - . GCA_005502385.1_02170_mRNA GCA_005502385.1_02170 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKAIDDKIEHFASYLQKKNNLDHIQFLKVRLGMQVVVSNIAKTIVTYGAALIFHTFLYTLITHISYFLIRHNAHGAHAKSTLLCHIQNLILFVGLPWLIAYYHINMGIMYSVSGLALLLIIIYAPAATKKQPIPERLKPRKKIKSIILVVVLIIISIIVPEPYKQLILLGMILESTTLLPFFFPKEDY . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 24004 24570 . - 0 GCA_005502385.1_02170 GCA_005502385.1_02170_gene,GCA_005502385.1_02170_mRNA GCA_005502385.1_02170 Accessory gene regulator protein B GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKAIDDKIEHFASYLQKKNNLDHIQFLKVRLGMQVVVSNIAKTIVTYGAALIFHTFLYTLITHISYFLIRHNAHGAHAKSTLLCHIQNLILFVGLPWLIAYYHINMGIMYSVSGLALLLIIIYAPAATKKQPIPERLKPRKKIKSIILVVVLIIISIIVPEPYKQLILLGMILESTTLLPFFFPKEDY persistent 188 Accessory gene regulator protein B WP_002455090.1 UPI0001EF503B UniRef100_UPI0001EF503B,UniRef50_Q54337,UniRef90_A0A3S7GWU6 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 24844 25269 . + . GCA_005502385.1_02171_gene GCA_005502385.1_02171 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 24844 25269 . + . GCA_005502385.1_02171_mRNA GCA_005502385.1_02171 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 . . . . . . . GCA_005502385.1|SCOV01000009.1 Infernal:001001 misc_RNA 24844 25269 129.2 + . GCA_005502385.1_02171 GCA_005502385.1_02171_gene,GCA_005502385.1_02171_mRNA GCA_005502385.1_02171 RNAIII GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 25272 26057 . - . GCA_005502385.1_02172_gene GCA_005502385.1_02172 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKIQIFQFHVEYGNVEKNEQKISEWFNTQLDDDTEVVVLPEMWNNGYALEELNEKADQALSRSFPFISNLAQTYQVDIVAGSVSNKQNNKVYNTAFTVSKKGRRINKYDKVHLVPMLNEPEFLEDGKTVPEPFALSSGALATQIICYDLRFPELLRYPSREGAQIAFYVAEWPTSRLNHWRNLLQARAIENDIFIVACNGTGHDGNTEYAGHSMVINPNGDILVELNREEDTISVDINIQEVSRQRDAIPIFRNLKPHLYK . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 25272 26057 . - . GCA_005502385.1_02172_mRNA GCA_005502385.1_02172 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKIQIFQFHVEYGNVEKNEQKISEWFNTQLDDDTEVVVLPEMWNNGYALEELNEKADQALSRSFPFISNLAQTYQVDIVAGSVSNKQNNKVYNTAFTVSKKGRRINKYDKVHLVPMLNEPEFLEDGKTVPEPFALSSGALATQIICYDLRFPELLRYPSREGAQIAFYVAEWPTSRLNHWRNLLQARAIENDIFIVACNGTGHDGNTEYAGHSMVINPNGDILVELNREEDTISVDINIQEVSRQRDAIPIFRNLKPHLYK . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 25272 26057 . - 0 GCA_005502385.1_02172 GCA_005502385.1_02172_gene,GCA_005502385.1_02172_mRNA GCA_005502385.1_02172 Omega-amidase YafV GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKIQIFQFHVEYGNVEKNEQKISEWFNTQLDDDTEVVVLPEMWNNGYALEELNEKADQALSRSFPFISNLAQTYQVDIVAGSVSNKQNNKVYNTAFTVSKKGRRINKYDKVHLVPMLNEPEFLEDGKTVPEPFALSSGALATQIICYDLRFPELLRYPSREGAQIAFYVAEWPTSRLNHWRNLLQARAIENDIFIVACNGTGHDGNTEYAGHSMVINPNGDILVELNREEDTISVDINIQEVSRQRDAIPIFRNLKPHLYK persistent 261 Hydrolase WP_002455091.1 UPI0001EF503C UniRef100_UPI0001EF503C,UniRef50_P0DP65,UniRef90_A0A3S7GXB2 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 26188 26811 . - . GCA_005502385.1_02173_gene GCA_005502385.1_02173 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MELFDKENTKPFLTEIENRRTIYKTKTSISISDEELEEMIEHIVKYMPSAFNSQSTRVVLLLNDQHIKFWENAKTVLKDVMGPDRDFEPTNQRINGFEHAYGTILYFEDEDVIKSLQEQMPSYADNFANWAVQTNAMHQYAIWTALSSKGIGASLQHYNPLVDQVTTQTFDIPASWKLVAQMPFGDIEEQAGEKEIHPTDQRFIIKK . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 26188 26811 . - . GCA_005502385.1_02173_mRNA GCA_005502385.1_02173 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MELFDKENTKPFLTEIENRRTIYKTKTSISISDEELEEMIEHIVKYMPSAFNSQSTRVVLLLNDQHIKFWENAKTVLKDVMGPDRDFEPTNQRINGFEHAYGTILYFEDEDVIKSLQEQMPSYADNFANWAVQTNAMHQYAIWTALSSKGIGASLQHYNPLVDQVTTQTFDIPASWKLVAQMPFGDIEEQAGEKEIHPTDQRFIIKK . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 26188 26811 . - 0 GCA_005502385.1_02173 GCA_005502385.1_02173_gene,GCA_005502385.1_02173_mRNA GCA_005502385.1_02173 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MELFDKENTKPFLTEIENRRTIYKTKTSISISDEELEEMIEHIVKYMPSAFNSQSTRVVLLLNDQHIKFWENAKTVLKDVMGPDRDFEPTNQRINGFEHAYGTILYFEDEDVIKSLQEQMPSYADNFANWAVQTNAMHQYAIWTALSSKGIGASLQHYNPLVDQVTTQTFDIPASWKLVAQMPFGDIEEQAGEKEIHPTDQRFIIKK persistent 207 Nitroreductase WP_049417196.1 UPI00066B517B UniRef100_UPI00066B517B,UniRef50_Q2FWN0,UniRef90_A0A3S7GX46 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 26989 28710 . + . GCA_005502385.1_02174_gene GCA_005502385.1_02174 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MIKQKVIRTSLIFAISATIFSHYSYAETSSNIESEGVDQKVNSQINSDTQQSKIKLSKENIKKFNYTSDETSNTEEPKIENIHQESDETNSKEKSAVEESQQESDETNSKEKSAVEESQQESDETNSKEKSAAEESQQESDETNSKEKSTVEESQQESNETNSKEKSAVEESQQESDETNSKEKSTVEESRKESDETNSTEKSAAEESQQESDETNSKEKSTVEESQQESDETNSTEKSTAEESRKESDETNSLEELKKEKVNDKNQQKSGIEHIHKNNTSSSKEKNHTKYKTAQKSKNYKNDDSTIFKQEEHQNVRSKSMKSKQNQIIQPYNDNTSSNVYSKTTYQKDKSQNSISKTMFNQLVSRQLVENNHNNFEPTHLKQNNLYFQSDRGKESTYRNAYQIESRFSENILNRFNQYAKGAYKYNPYIINKINHLDDNGEKITNKDFNRLIKKQKFDNQNLNILQEDSQYFRFQYFNPLNAKEYYKNLDEQVLSLITSDIGSMPDLKKPKTIHKDEEEEEQHKKVITSSHKKTESKSYIKTLNMILIPTLILISSTVMIIYGYQNLKTKKK . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 26989 28710 . + . GCA_005502385.1_02174_mRNA GCA_005502385.1_02174 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MIKQKVIRTSLIFAISATIFSHYSYAETSSNIESEGVDQKVNSQINSDTQQSKIKLSKENIKKFNYTSDETSNTEEPKIENIHQESDETNSKEKSAVEESQQESDETNSKEKSAVEESQQESDETNSKEKSAAEESQQESDETNSKEKSTVEESQQESNETNSKEKSAVEESQQESDETNSKEKSTVEESRKESDETNSTEKSAAEESQQESDETNSKEKSTVEESQQESDETNSTEKSTAEESRKESDETNSLEELKKEKVNDKNQQKSGIEHIHKNNTSSSKEKNHTKYKTAQKSKNYKNDDSTIFKQEEHQNVRSKSMKSKQNQIIQPYNDNTSSNVYSKTTYQKDKSQNSISKTMFNQLVSRQLVENNHNNFEPTHLKQNNLYFQSDRGKESTYRNAYQIESRFSENILNRFNQYAKGAYKYNPYIINKINHLDDNGEKITNKDFNRLIKKQKFDNQNLNILQEDSQYFRFQYFNPLNAKEYYKNLDEQVLSLITSDIGSMPDLKKPKTIHKDEEEEEQHKKVITSSHKKTESKSYIKTLNMILIPTLILISSTVMIIYGYQNLKTKKK . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 26989 28710 . + 0 GCA_005502385.1_02174 GCA_005502385.1_02174_gene,GCA_005502385.1_02174_mRNA GCA_005502385.1_02174 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MIKQKVIRTSLIFAISATIFSHYSYAETSSNIESEGVDQKVNSQINSDTQQSKIKLSKENIKKFNYTSDETSNTEEPKIENIHQESDETNSKEKSAVEESQQESDETNSKEKSAVEESQQESDETNSKEKSAAEESQQESDETNSKEKSTVEESQQESNETNSKEKSAVEESQQESDETNSKEKSTVEESRKESDETNSTEKSAAEESQQESDETNSKEKSTVEESQQESDETNSTEKSTAEESRKESDETNSLEELKKEKVNDKNQQKSGIEHIHKNNTSSSKEKNHTKYKTAQKSKNYKNDDSTIFKQEEHQNVRSKSMKSKQNQIIQPYNDNTSSNVYSKTTYQKDKSQNSISKTMFNQLVSRQLVENNHNNFEPTHLKQNNLYFQSDRGKESTYRNAYQIESRFSENILNRFNQYAKGAYKYNPYIINKINHLDDNGEKITNKDFNRLIKKQKFDNQNLNILQEDSQYFRFQYFNPLNAKEYYKNLDEQVLSLITSDIGSMPDLKKPKTIHKDEEEEEQHKKVITSSHKKTESKSYIKTLNMILIPTLILISSTVMIIYGYQNLKTKKK shell 573 sdrH SdrH family protein WP_242536661.1 UPI001F5DDF22 UniRef100_UPI001F5DDF22,UniRef50_A0AAE5MXH1,UniRef90_UPI00287A3D6E . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 28766 29506 . - . GCA_005502385.1_02175_gene GCA_005502385.1_02175 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MARIWVAILTLIIYALAQFLPLVLAQTPIFSRLSGMALARAGVYTQVILFILAAILIIFFHFKIKNPTNLEQEHKESKRYIIPWAILGFFIVMLYQVIVGVINIWIFGQPQQSPNTQRIMAVAKQLPIFIILISVVGPILEEYVFRKVFFGELYDRIKGNRIIAFLIASTVSSLLFALAHNDIKFILIYFGMGMILSLAYTLTKRISVPILIHIFQNGFVVVMQFFLGDSLNHLKQQTQFIIHLCN . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 28766 29506 . - . GCA_005502385.1_02175_mRNA GCA_005502385.1_02175 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MARIWVAILTLIIYALAQFLPLVLAQTPIFSRLSGMALARAGVYTQVILFILAAILIIFFHFKIKNPTNLEQEHKESKRYIIPWAILGFFIVMLYQVIVGVINIWIFGQPQQSPNTQRIMAVAKQLPIFIILISVVGPILEEYVFRKVFFGELYDRIKGNRIIAFLIASTVSSLLFALAHNDIKFILIYFGMGMILSLAYTLTKRISVPILIHIFQNGFVVVMQFFLGDSLNHLKQQTQFIIHLCN . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 28766 29506 . - 0 GCA_005502385.1_02175 GCA_005502385.1_02175_gene,GCA_005502385.1_02175_mRNA GCA_005502385.1_02175 Membrane-embedded CAAX protease MroQ GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MARIWVAILTLIIYALAQFLPLVLAQTPIFSRLSGMALARAGVYTQVILFILAAILIIFFHFKIKNPTNLEQEHKESKRYIIPWAILGFFIVMLYQVIVGVINIWIFGQPQQSPNTQRIMAVAKQLPIFIILISVVGPILEEYVFRKVFFGELYDRIKGNRIIAFLIASTVSSLLFALAHNDIKFILIYFGMGMILSLAYTLTKRISVPILIHIFQNGFVVVMQFFLGDSLNHLKQQTQFIIHLCN persistent 246 mroQ intramembrane glutamic endopeptidase MroQ 3.4.26.- WP_002450067.1 UPI00019FB5BA UniRef100_UPI00019FB5BA,UniRef50_A0A0H2XEK8,UniRef90_A0AAE5F6R1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 29681 29968 . + . GCA_005502385.1_02176_gene GCA_005502385.1_02176 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MLKPLGNRVIIERKEQEQTTKSGIVLTDSAKEKSNEGVVVAVGSGRLLDNGETVAPEVKEGDSVVFQEYAGSEIKRGEESYLILNVEDILAIIEK . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 29681 29968 . + . GCA_005502385.1_02176_mRNA GCA_005502385.1_02176 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MLKPLGNRVIIERKEQEQTTKSGIVLTDSAKEKSNEGVVVAVGSGRLLDNGETVAPEVKEGDSVVFQEYAGSEIKRGEESYLILNVEDILAIIEK . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 29681 29968 . + 0 GCA_005502385.1_02176 GCA_005502385.1_02176_gene,GCA_005502385.1_02176_mRNA GCA_005502385.1_02176 10 kDa chaperonin GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MLKPLGNRVIIERKEQEQTTKSGIVLTDSAKEKSNEGVVVAVGSGRLLDNGETVAPEVKEGDSVVFQEYAGSEIKRGEESYLILNVEDILAIIEK persistent 95 groES co-chaperone GroES WP_002450026.1 UPI00019FB5B9 UniRef100_A0A657M3D1,UniRef50_P37283,UniRef90_A0A657M3D1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 30025 31644 . + . GCA_005502385.1_02177_gene GCA_005502385.1_02177 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MAKDLKFSEDARQAMLRGVDKLANAVKVTIGPKGRNVVLDKEYVAPLITNDGVTIAKEIELEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGLREGIDKAVRVAVEALHDISQKVENKNEIAQVGAISAADEEIGKYISEAMDKVGNDGVITIEESNGLDTELEVVEGMQFDRGYQSPYMVTDSDKMIAELERPYILVTDKKISSFQDILPLLEQVVQSSRPILIVADEVEGDALTNIVLNRMRGTFTAVAVKAPGFGDRRKAMLEDLAILTGATVITDDLGLELKDASIDMLGTANKVEVTKDNTTVVDGDGDDNSIDARVSQIKAQIEETDSDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNIYNKVEEIEAEGDVATGVNIVLKALSAPVRQIAENAGLEGSVIVERLKHADAGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAVVANIPEPESNDNAAMGGMPGMM . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 30025 31644 . + . GCA_005502385.1_02177_mRNA GCA_005502385.1_02177 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MAKDLKFSEDARQAMLRGVDKLANAVKVTIGPKGRNVVLDKEYVAPLITNDGVTIAKEIELEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGLREGIDKAVRVAVEALHDISQKVENKNEIAQVGAISAADEEIGKYISEAMDKVGNDGVITIEESNGLDTELEVVEGMQFDRGYQSPYMVTDSDKMIAELERPYILVTDKKISSFQDILPLLEQVVQSSRPILIVADEVEGDALTNIVLNRMRGTFTAVAVKAPGFGDRRKAMLEDLAILTGATVITDDLGLELKDASIDMLGTANKVEVTKDNTTVVDGDGDDNSIDARVSQIKAQIEETDSDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNIYNKVEEIEAEGDVATGVNIVLKALSAPVRQIAENAGLEGSVIVERLKHADAGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAVVANIPEPESNDNAAMGGMPGMM . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 30025 31644 . + 0 GCA_005502385.1_02177 GCA_005502385.1_02177_gene,GCA_005502385.1_02177_mRNA GCA_005502385.1_02177 60 kDa chaperonin GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MAKDLKFSEDARQAMLRGVDKLANAVKVTIGPKGRNVVLDKEYVAPLITNDGVTIAKEIELEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGLREGIDKAVRVAVEALHDISQKVENKNEIAQVGAISAADEEIGKYISEAMDKVGNDGVITIEESNGLDTELEVVEGMQFDRGYQSPYMVTDSDKMIAELERPYILVTDKKISSFQDILPLLEQVVQSSRPILIVADEVEGDALTNIVLNRMRGTFTAVAVKAPGFGDRRKAMLEDLAILTGATVITDDLGLELKDASIDMLGTANKVEVTKDNTTVVDGDGDDNSIDARVSQIKAQIEETDSDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNIYNKVEEIEAEGDVATGVNIVLKALSAPVRQIAENAGLEGSVIVERLKHADAGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAVVANIPEPESNDNAAMGGMPGMM persistent 539 groL chaperonin GroEL 5.6.1.7 GO:0005524,GO:0005737,GO:0016853,GO:0042026,GO:0051082,GO:0140662 COG0459,O WP_002450059.1 UPI00019FB5B8 UniRef100_A0A1L8Y8A8,UniRef50_Q9KKF0,UniRef90_Q08854 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 32543 33214 . + . GCA_005502385.1_02178_gene GCA_005502385.1_02178 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MRINILQHTPNEGPGVIRDWATEHHHELYIYHPYFNGGIIPNVKETDLLIILGGPMSPNNEDKWIFEERELIRNLIQQGKLIFGICFGAQQIAKALGYTVGKSPVKEVGWNKVYRESSIIPNIPKELMALHWHEETFYIPKNAQLLFSSQYLKNQGFILNNNIIGLQFHFEPDAHDIKEIVMNDASYAVDSVLNQTSEQILNQEVPKENKEVMFKLLDFITSH . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 32543 33214 . + . GCA_005502385.1_02178_mRNA GCA_005502385.1_02178 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MRINILQHTPNEGPGVIRDWATEHHHELYIYHPYFNGGIIPNVKETDLLIILGGPMSPNNEDKWIFEERELIRNLIQQGKLIFGICFGAQQIAKALGYTVGKSPVKEVGWNKVYRESSIIPNIPKELMALHWHEETFYIPKNAQLLFSSQYLKNQGFILNNNIIGLQFHFEPDAHDIKEIVMNDASYAVDSVLNQTSEQILNQEVPKENKEVMFKLLDFITSH . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 32543 33214 . + 0 GCA_005502385.1_02178 GCA_005502385.1_02178_gene,GCA_005502385.1_02178_mRNA GCA_005502385.1_02178 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MRINILQHTPNEGPGVIRDWATEHHHELYIYHPYFNGGIIPNVKETDLLIILGGPMSPNNEDKWIFEERELIRNLIQQGKLIFGICFGAQQIAKALGYTVGKSPVKEVGWNKVYRESSIIPNIPKELMALHWHEETFYIPKNAQLLFSSQYLKNQGFILNNNIIGLQFHFEPDAHDIKEIVMNDASYAVDSVLNQTSEQILNQEVPKENKEVMFKLLDFITSH persistent 223 GMP synthase WP_048761675.1 UPI00065FD3DA UniRef100_UPI00065FD3DA,UniRef50_C8P554,UniRef90_A0A3S7GWX3 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 33265 34551 . - . GCA_005502385.1_02179_gene GCA_005502385.1_02179 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNPLAQHLNDQLGDDRPEILSMLSTLGQSMFYPKGILSQSAEAKSTKYNATIGMATNDKGKMYADTLFDVYNHLSPDEIFPYAPPQGIETLRDLWQQKMLKENPSLKASSISRPIVTNALTHGLSLVADLFVNDEDTILLPTHNWGNYKLIFNTRHKANIETYAIFDQDGHYTTNSLVSTLDNFKQDKAIIILNYPNNPTGYTPTKEEVLTIVSAIERLAEKGTKVITVVDDAYYGLFYEDVYTQSIFTAITQLDSKNILPIRLDGATKEFFAWGLRVGFLTFGLSNQKAKDVLEAKVKGLIRSNISSGAMPSQSAIKYILENHEQFDKEIQANVKTLQERYEVTKEVVYDEKYKQHWQAYDFNSGYFMALKVIGVNPEKLRVHLIDNYSIGIIALNDTDIRIAFSCVEKNDIPHVFDSIAKAIDDLK . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 33265 34551 . - . GCA_005502385.1_02179_mRNA GCA_005502385.1_02179 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNPLAQHLNDQLGDDRPEILSMLSTLGQSMFYPKGILSQSAEAKSTKYNATIGMATNDKGKMYADTLFDVYNHLSPDEIFPYAPPQGIETLRDLWQQKMLKENPSLKASSISRPIVTNALTHGLSLVADLFVNDEDTILLPTHNWGNYKLIFNTRHKANIETYAIFDQDGHYTTNSLVSTLDNFKQDKAIIILNYPNNPTGYTPTKEEVLTIVSAIERLAEKGTKVITVVDDAYYGLFYEDVYTQSIFTAITQLDSKNILPIRLDGATKEFFAWGLRVGFLTFGLSNQKAKDVLEAKVKGLIRSNISSGAMPSQSAIKYILENHEQFDKEIQANVKTLQERYEVTKEVVYDEKYKQHWQAYDFNSGYFMALKVIGVNPEKLRVHLIDNYSIGIIALNDTDIRIAFSCVEKNDIPHVFDSIAKAIDDLK . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 33265 34551 . - 0 GCA_005502385.1_02179 GCA_005502385.1_02179_gene,GCA_005502385.1_02179_mRNA GCA_005502385.1_02179 Histidinol-phosphate aminotransferase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNPLAQHLNDQLGDDRPEILSMLSTLGQSMFYPKGILSQSAEAKSTKYNATIGMATNDKGKMYADTLFDVYNHLSPDEIFPYAPPQGIETLRDLWQQKMLKENPSLKASSISRPIVTNALTHGLSLVADLFVNDEDTILLPTHNWGNYKLIFNTRHKANIETYAIFDQDGHYTTNSLVSTLDNFKQDKAIIILNYPNNPTGYTPTKEEVLTIVSAIERLAEKGTKVITVVDDAYYGLFYEDVYTQSIFTAITQLDSKNILPIRLDGATKEFFAWGLRVGFLTFGLSNQKAKDVLEAKVKGLIRSNISSGAMPSQSAIKYILENHEQFDKEIQANVKTLQERYEVTKEVVYDEKYKQHWQAYDFNSGYFMALKVIGVNPEKLRVHLIDNYSIGIIALNDTDIRIAFSCVEKNDIPHVFDSIAKAIDDLK persistent 428 Aminotransferase class I/classII large domain-containing protein WP_048761672.1 UPI000660DCBD UniRef100_A0A4Q9WQS5,UniRef50_A0A380FXV6,UniRef90_A0A4Q9WQS5 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 35016 35195 . + . GCA_005502385.1_02180_gene GCA_005502385.1_02180 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MMKHLTKIFVGLAIVLFVIGYYLQATGHESQGIKLLLAAIMFMICAFINRSNDRRKNKK . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 35016 35195 . + . GCA_005502385.1_02180_mRNA GCA_005502385.1_02180 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MMKHLTKIFVGLAIVLFVIGYYLQATGHESQGIKLLLAAIMFMICAFINRSNDRRKNKK . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 35016 35195 . + 0 GCA_005502385.1_02180 GCA_005502385.1_02180_gene,GCA_005502385.1_02180_mRNA GCA_005502385.1_02180 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MMKHLTKIFVGLAIVLFVIGYYLQATGHESQGIKLLLAAIMFMICAFINRSNDRRKNKK persistent 59 SE1626 family protein UniRef50_A0A151A0Y9,UniRef90_A0A1J3ZTX2 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 35383 35763 . + . GCA_005502385.1_02181_gene GCA_005502385.1_02181 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKVILKNTSEQPIYEQIKQQIKENILKGYVEAGSHLPSMRELAKDLQVSLITTKRAYEDLEKEGFVTTIRGKGTFVKEQDSSILKEKQFFVIEHLARSMVKEAKTIGMPLKELNEVLALIYEEEDE . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 35383 35763 . + . GCA_005502385.1_02181_mRNA GCA_005502385.1_02181 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKVILKNTSEQPIYEQIKQQIKENILKGYVEAGSHLPSMRELAKDLQVSLITTKRAYEDLEKEGFVTTIRGKGTFVKEQDSSILKEKQFFVIEHLARSMVKEAKTIGMPLKELNEVLALIYEEEDE . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 35383 35763 . + 0 GCA_005502385.1_02181 GCA_005502385.1_02181_gene,GCA_005502385.1_02181_mRNA GCA_005502385.1_02181 HTH-type transcriptional repressor YtrA GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKVILKNTSEQPIYEQIKQQIKENILKGYVEAGSHLPSMRELAKDLQVSLITTKRAYEDLEKEGFVTTIRGKGTFVKEQDSSILKEKQFFVIEHLARSMVKEAKTIGMPLKELNEVLALIYEEEDE persistent 126 pmtR PSM export ABC transporter transcriptional regulator PmtR COG1725,K WP_002450053.1 UPI00019FB5B3 UniRef100_A0A1L8Y8B7,UniRef50_R9LXS2,UniRef90_A0A380FZJ6 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 35760 36659 . + . GCA_005502385.1_02182_gene GCA_005502385.1_02182 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKAIEVKHVSYNTKTFQIKDLSFSIPQGFVTGFIGSNGAGKTTMIRLMMDLLEPNTGEIKILGRQMKESAKWIKNKIGFVYSEMYFNQQWNIKKLENMISPFYSKWDSHIFHQYLERFNIPSHLKIKHFSSGMKMKLSLAIALSHHAELFILDEPTAGLDPIVRNEVLEILQQELIDENKTVFISTHIISDLEKIADYLVYIKTGNLVLEGYCDDIKEKYFIVKGDNKDLDDELNQLLLYKEEKQTGYVGFTKHGQTFKELFGKQVEIKHPTIEELMIYLEKMKETNDVETQNRNGLMT . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 35760 36659 . + . GCA_005502385.1_02182_mRNA GCA_005502385.1_02182 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKAIEVKHVSYNTKTFQIKDLSFSIPQGFVTGFIGSNGAGKTTMIRLMMDLLEPNTGEIKILGRQMKESAKWIKNKIGFVYSEMYFNQQWNIKKLENMISPFYSKWDSHIFHQYLERFNIPSHLKIKHFSSGMKMKLSLAIALSHHAELFILDEPTAGLDPIVRNEVLEILQQELIDENKTVFISTHIISDLEKIADYLVYIKTGNLVLEGYCDDIKEKYFIVKGDNKDLDDELNQLLLYKEEKQTGYVGFTKHGQTFKELFGKQVEIKHPTIEELMIYLEKMKETNDVETQNRNGLMT . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 35760 36659 . + 0 GCA_005502385.1_02182 GCA_005502385.1_02182_gene,GCA_005502385.1_02182_mRNA GCA_005502385.1_02182 Vitamin B12 import ATP-binding protein BtuD GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKAIEVKHVSYNTKTFQIKDLSFSIPQGFVTGFIGSNGAGKTTMIRLMMDLLEPNTGEIKILGRQMKESAKWIKNKIGFVYSEMYFNQQWNIKKLENMISPFYSKWDSHIFHQYLERFNIPSHLKIKHFSSGMKMKLSLAIALSHHAELFILDEPTAGLDPIVRNEVLEILQQELIDENKTVFISTHIISDLEKIADYLVYIKTGNLVLEGYCDDIKEKYFIVKGDNKDLDDELNQLLLYKEEKQTGYVGFTKHGQTFKELFGKQVEIKHPTIEELMIYLEKMKETNDVETQNRNGLMT persistent 299 pmtA phenol-soluble modulin export ABC transporter ATP-binding protein PmtA WP_019835507.1 UPI0003664B65 UniRef100_UPI0003664B65,UniRef50_A0A380DUR2,UniRef90_A0A3S7GX54 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 36656 37318 . + . GCA_005502385.1_02183_gene GCA_005502385.1_02183 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKQLIIRNFKLRRWTLIIYLVLIVINPIYTLFFSKTSYGFVVYIPLAITLMIISILDSGQLFRVHRRLGGKEAYLFYESLPITKKELLNANYLTCIILTILGTLIIGLYNFQSTNIQVNELRYSTALSFLSVNLFSIPIAFSKSTERKREYISYTVYIILMVLAIPMAIAFIFLTINLFIFHNALDPNVFNKYLSIGLVIISVIWLVINYFIQIARINRR . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 36656 37318 . + . GCA_005502385.1_02183_mRNA GCA_005502385.1_02183 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKQLIIRNFKLRRWTLIIYLVLIVINPIYTLFFSKTSYGFVVYIPLAITLMIISILDSGQLFRVHRRLGGKEAYLFYESLPITKKELLNANYLTCIILTILGTLIIGLYNFQSTNIQVNELRYSTALSFLSVNLFSIPIAFSKSTERKREYISYTVYIILMVLAIPMAIAFIFLTINLFIFHNALDPNVFNKYLSIGLVIISVIWLVINYFIQIARINRR . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 36656 37318 . + 0 GCA_005502385.1_02183 GCA_005502385.1_02183_gene,GCA_005502385.1_02183_mRNA GCA_005502385.1_02183 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKQLIIRNFKLRRWTLIIYLVLIVINPIYTLFFSKTSYGFVVYIPLAITLMIISILDSGQLFRVHRRLGGKEAYLFYESLPITKKELLNANYLTCIILTILGTLIIGLYNFQSTNIQVNELRYSTALSFLSVNLFSIPIAFSKSTERKREYISYTVYIILMVLAIPMAIAFIFLTINLFIFHNALDPNVFNKYLSIGLVIISVIWLVINYFIQIARINRR persistent 220 pmtB phenol-soluble modulin export ABC transporter permease subunit PmtB WP_017175264.1 UPI0002DC09B7 UniRef100_A0A4Q9WQB4,UniRef50_Q5HMZ9,UniRef90_A0A6N0I1F4 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 37336 38208 . + . GCA_005502385.1_02184_gene GCA_005502385.1_02184 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKLENITKTYGNHNVLDNIDFDFGDSKIVGLIGKNGVGKTTLMKVMNGNIINYKGKVNLKDDENIGYLIEHPKLYDNKTGLYNLRLFAQVLGQGFDKAYSDKIIDAFGMRPYIKKKVKKYSMGMKQKLAIAVSLMNKPKYLILDEPTNGMDPDGSIDVLETIQSLVNELNMKILISSHKLEDIELICDRAVFLRDGHFVQDVNMKDGSAEESTSITLDNDDFDQALNYLQEHFNVIHSYKQNGEILIKAERDYRTLLKALAHINVYPKYIETRKNSLRDTYFNINQRGDH . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 37336 38208 . + . GCA_005502385.1_02184_mRNA GCA_005502385.1_02184 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKLENITKTYGNHNVLDNIDFDFGDSKIVGLIGKNGVGKTTLMKVMNGNIINYKGKVNLKDDENIGYLIEHPKLYDNKTGLYNLRLFAQVLGQGFDKAYSDKIIDAFGMRPYIKKKVKKYSMGMKQKLAIAVSLMNKPKYLILDEPTNGMDPDGSIDVLETIQSLVNELNMKILISSHKLEDIELICDRAVFLRDGHFVQDVNMKDGSAEESTSITLDNDDFDQALNYLQEHFNVIHSYKQNGEILIKAERDYRTLLKALAHINVYPKYIETRKNSLRDTYFNINQRGDH . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 37336 38208 . + 0 GCA_005502385.1_02184 GCA_005502385.1_02184_gene,GCA_005502385.1_02184_mRNA GCA_005502385.1_02184 Bacitracin transport ATP-binding protein BcrA GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKLENITKTYGNHNVLDNIDFDFGDSKIVGLIGKNGVGKTTLMKVMNGNIINYKGKVNLKDDENIGYLIEHPKLYDNKTGLYNLRLFAQVLGQGFDKAYSDKIIDAFGMRPYIKKKVKKYSMGMKQKLAIAVSLMNKPKYLILDEPTNGMDPDGSIDVLETIQSLVNELNMKILISSHKLEDIELICDRAVFLRDGHFVQDVNMKDGSAEESTSITLDNDDFDQALNYLQEHFNVIHSYKQNGEILIKAERDYRTLLKALAHINVYPKYIETRKNSLRDTYFNINQRGDH persistent 290 pmtC phenol-soluble modulin export ABC transporter ATP-binding protein PmtC WP_017175263.1 UPI0002FF571D UniRef100_A0A4V2KX39,UniRef50_S2XE79,UniRef90_A0A4V2KX39 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 38209 38937 . + . GCA_005502385.1_02185_gene GCA_005502385.1_02185 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKSLQLVKYDILSFFKSYLTYIALICIWGIITAMTVLLAKNNDKVDYSMILPMANWMFLFFGLLVVIKTITRDYSQGTIQLYMNKVKNRVGYVIAKTISIIIFSFIFTLITYVTLLVIQTFTDGKNLNGDKFLTNIWFYLIFLLFFGLLLFLITLIVQKPAVIFTLGIFLVFIVPFLQPFLGLIPEWGDNIQKSLKYIPFSYLTEKSSSGSIKFTNWQWFISIASIVILFIADVLYAAKRDI . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 38209 38937 . + . GCA_005502385.1_02185_mRNA GCA_005502385.1_02185 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKSLQLVKYDILSFFKSYLTYIALICIWGIITAMTVLLAKNNDKVDYSMILPMANWMFLFFGLLVVIKTITRDYSQGTIQLYMNKVKNRVGYVIAKTISIIIFSFIFTLITYVTLLVIQTFTDGKNLNGDKFLTNIWFYLIFLLFFGLLLFLITLIVQKPAVIFTLGIFLVFIVPFLQPFLGLIPEWGDNIQKSLKYIPFSYLTEKSSSGSIKFTNWQWFISIASIVILFIADVLYAAKRDI . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 38209 38937 . + 0 GCA_005502385.1_02185 GCA_005502385.1_02185_gene,GCA_005502385.1_02185_mRNA GCA_005502385.1_02185 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKSLQLVKYDILSFFKSYLTYIALICIWGIITAMTVLLAKNNDKVDYSMILPMANWMFLFFGLLVVIKTITRDYSQGTIQLYMNKVKNRVGYVIAKTISIIIFSFIFTLITYVTLLVIQTFTDGKNLNGDKFLTNIWFYLIFLLFFGLLLFLITLIVQKPAVIFTLGIFLVFIVPFLQPFLGLIPEWGDNIQKSLKYIPFSYLTEKSSSGSIKFTNWQWFISIASIVILFIADVLYAAKRDI persistent 242 pmtD phenol-soluble modulin export ABC transporter permease subunit PmtD WP_017175262.1 UPI000308D9F9 UniRef100_A0A4Q9WPI9,UniRef50_Q49YX4,UniRef90_A0A974KVG3 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 39083 39568 . + . GCA_005502385.1_02186_gene GCA_005502385.1_02186 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MHIQNRWVISILFIVISLLVVLGLTIYKNEKTVDLSDVEINHLKLNETFDNSEYSLNKHVKLDRYVFYNHNKYKNLTIKVKKKHHKIKGIILVKDTFVNTNFDVHIGDPIDAVIDNLGYNYDKDKVGKGYDVLVYLDKDHHMKLSILYKDNIVKRIEFFSR . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 39083 39568 . + . GCA_005502385.1_02186_mRNA GCA_005502385.1_02186 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MHIQNRWVISILFIVISLLVVLGLTIYKNEKTVDLSDVEINHLKLNETFDNSEYSLNKHVKLDRYVFYNHNKYKNLTIKVKKKHHKIKGIILVKDTFVNTNFDVHIGDPIDAVIDNLGYNYDKDKVGKGYDVLVYLDKDHHMKLSILYKDNIVKRIEFFSR . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 39083 39568 . + 0 GCA_005502385.1_02186 GCA_005502385.1_02186_gene,GCA_005502385.1_02186_mRNA GCA_005502385.1_02186 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MHIQNRWVISILFIVISLLVVLGLTIYKNEKTVDLSDVEINHLKLNETFDNSEYSLNKHVKLDRYVFYNHNKYKNLTIKVKKKHHKIKGIILVKDTFVNTNFDVHIGDPIDAVIDNLGYNYDKDKVGKGYDVLVYLDKDHHMKLSILYKDNIVKRIEFFSR persistent 161 DUF5590 domain-containing protein WP_069723711.1 UPI00085189FE UniRef100_UPI00085189FE,UniRef50_A0A1J3ZSY5,UniRef90_A0A4Q9WPI0 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 39617 40171 . + . GCA_005502385.1_02187_gene GCA_005502385.1_02187 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MDKITFLNELETELDDLPRKDKDKVMNEYEDIFYNQETKGKTDAQILDDLKNPYTIGKEIKAKEAISHAKVTPNFRNIVKAIMASLSLGVISFFLIVIPMIIFLIFLAFVFVISIVLICLPILLIIISILKSTPDSFSNFLYSISYAGIGILAFVAIIKIVQNLYKLVLKYLSWYIKIIKGRIQ . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 39617 40171 . + . GCA_005502385.1_02187_mRNA GCA_005502385.1_02187 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MDKITFLNELETELDDLPRKDKDKVMNEYEDIFYNQETKGKTDAQILDDLKNPYTIGKEIKAKEAISHAKVTPNFRNIVKAIMASLSLGVISFFLIVIPMIIFLIFLAFVFVISIVLICLPILLIIISILKSTPDSFSNFLYSISYAGIGILAFVAIIKIVQNLYKLVLKYLSWYIKIIKGRIQ . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 39617 40171 . + 0 GCA_005502385.1_02187 GCA_005502385.1_02187_gene,GCA_005502385.1_02187_mRNA GCA_005502385.1_02187 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MDKITFLNELETELDDLPRKDKDKVMNEYEDIFYNQETKGKTDAQILDDLKNPYTIGKEIKAKEAISHAKVTPNFRNIVKAIMASLSLGVISFFLIVIPMIIFLIFLAFVFVISIVLICLPILLIIISILKSTPDSFSNFLYSISYAGIGILAFVAIIKIVQNLYKLVLKYLSWYIKIIKGRIQ persistent 184 DUF1700 domain-containing protein WP_019835505.1 UPI00036EE618 UniRef100_UPI00036EE618,UniRef50_Q2FWX3,UniRef90_A0AAE5MXG7 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 40171 41013 . + . GCA_005502385.1_02188_gene GCA_005502385.1_02188 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKKLTISGLVIFVVFFLAATLVWFVHDKDIYKRLKYNETFHQSSISKLNIDSYSSDITITQGSSFRVKYYGDNSIKVNTQKDSLNVKESRSSKRGYSFNLNPFKRSKFNIHITIPPDKLKQLNIDAKLGKLNINNIDIKKARIRKDGENLNIKEAKLDRIDYYSDHGTINIKNSDIKNSQFKVINSNIVVNHCTLKNGLFITNEGKLDFKNMPSQIDMKSSSKKGDINIDYKTKPKDTLLKLHPGMGDNNIKNPYFKDSKVGNSYNIIECYNVKGDINIK . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 40171 41013 . + . GCA_005502385.1_02188_mRNA GCA_005502385.1_02188 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKKLTISGLVIFVVFFLAATLVWFVHDKDIYKRLKYNETFHQSSISKLNIDSYSSDITITQGSSFRVKYYGDNSIKVNTQKDSLNVKESRSSKRGYSFNLNPFKRSKFNIHITIPPDKLKQLNIDAKLGKLNINNIDIKKARIRKDGENLNIKEAKLDRIDYYSDHGTINIKNSDIKNSQFKVINSNIVVNHCTLKNGLFITNEGKLDFKNMPSQIDMKSSSKKGDINIDYKTKPKDTLLKLHPGMGDNNIKNPYFKDSKVGNSYNIIECYNVKGDINIK . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 40171 41013 . + 0 GCA_005502385.1_02188 GCA_005502385.1_02188_gene,GCA_005502385.1_02188_mRNA GCA_005502385.1_02188 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKKLTISGLVIFVVFFLAATLVWFVHDKDIYKRLKYNETFHQSSISKLNIDSYSSDITITQGSSFRVKYYGDNSIKVNTQKDSLNVKESRSSKRGYSFNLNPFKRSKFNIHITIPPDKLKQLNIDAKLGKLNINNIDIKKARIRKDGENLNIKEAKLDRIDYYSDHGTINIKNSDIKNSQFKVINSNIVVNHCTLKNGLFITNEGKLDFKNMPSQIDMKSSSKKGDINIDYKTKPKDTLLKLHPGMGDNNIKNPYFKDSKVGNSYNIIECYNVKGDINIK persistent 280 DUF4097 domain-containing protein WP_019835504.1 UPI00036F3951 UniRef100_UPI00036F3951,UniRef50_A0A2A1K916,UniRef90_A0AAE5JKI0 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 41079 42119 . - . GCA_005502385.1_02189_gene GCA_005502385.1_02189 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MQEVKSDIMTFRGSHFDLGIKTAQWLKQTPLLENREREWKKRIPRFDIDVNETYSIFQTYAPEIWEELLGMQEILNLPTKQMILNFGHYRFTDLNESGCTVFQGKDYMVRNYDYHPATYDGRYLLYQPNDGGLAQIGPTSRVTGRMDGMNEAGLVMGYNFMHRKHPANGFVCYMVGRLVLEYCKDVKEAIQFLKELPHRSSFSYILMDKHLNHAIVEITPRSFDVRYDKVCTNHFEILTHENRNYTKESKERLARTISQTSEDIDKYTAFKLFNDPKYNIYSKLFKSWSGTIHTSMYEPKHLKAWMTLGENRPPLSIDFQSWLKGHELDLIEFTGKLDTDLTFATY . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 41079 42119 . - . GCA_005502385.1_02189_mRNA GCA_005502385.1_02189 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MQEVKSDIMTFRGSHFDLGIKTAQWLKQTPLLENREREWKKRIPRFDIDVNETYSIFQTYAPEIWEELLGMQEILNLPTKQMILNFGHYRFTDLNESGCTVFQGKDYMVRNYDYHPATYDGRYLLYQPNDGGLAQIGPTSRVTGRMDGMNEAGLVMGYNFMHRKHPANGFVCYMVGRLVLEYCKDVKEAIQFLKELPHRSSFSYILMDKHLNHAIVEITPRSFDVRYDKVCTNHFEILTHENRNYTKESKERLARTISQTSEDIDKYTAFKLFNDPKYNIYSKLFKSWSGTIHTSMYEPKHLKAWMTLGENRPPLSIDFQSWLKGHELDLIEFTGKLDTDLTFATY . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 41079 42119 . - 0 GCA_005502385.1_02189 GCA_005502385.1_02189_gene,GCA_005502385.1_02189_mRNA GCA_005502385.1_02189 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MQEVKSDIMTFRGSHFDLGIKTAQWLKQTPLLENREREWKKRIPRFDIDVNETYSIFQTYAPEIWEELLGMQEILNLPTKQMILNFGHYRFTDLNESGCTVFQGKDYMVRNYDYHPATYDGRYLLYQPNDGGLAQIGPTSRVTGRMDGMNEAGLVMGYNFMHRKHPANGFVCYMVGRLVLEYCKDVKEAIQFLKELPHRSSFSYILMDKHLNHAIVEITPRSFDVRYDKVCTNHFEILTHENRNYTKESKERLARTISQTSEDIDKYTAFKLFNDPKYNIYSKLFKSWSGTIHTSMYEPKHLKAWMTLGENRPPLSIDFQSWLKGHELDLIEFTGKLDTDLTFATY persistent 346 Acyl-CoA--6-aminopenicillanic acid acyltransferase WP_069723710.1 UPI000851CE76 UniRef100_UPI000851CE76,UniRef50_A0A380GLM7,UniRef90_A0A6N0I1L9 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 42399 42572 . + . GCA_005502385.1_02190_gene GCA_005502385.1_02190 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MWDFIKGLFKFLLSFTAITALVIGVVVVVFGFIFKKDFEDIERKTKEIVSDIESNNA . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 42399 42572 . + . GCA_005502385.1_02190_mRNA GCA_005502385.1_02190 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MWDFIKGLFKFLLSFTAITALVIGVVVVVFGFIFKKDFEDIERKTKEIVSDIESNNA . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 42399 42572 . + 0 GCA_005502385.1_02190 GCA_005502385.1_02190_gene,GCA_005502385.1_02190_mRNA GCA_005502385.1_02190 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MWDFIKGLFKFLLSFTAITALVIGVVVVVFGFIFKKDFEDIERKTKEIVSDIESNNA persistent 57 Phage protein WP_019835503.1 UPI000380189D UniRef100_UPI000380189D,UniRef50_Q2FWX6,UniRef90_A0A4Q9WWM2 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 42695 43741 . + . GCA_005502385.1_02191_gene GCA_005502385.1_02191 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTTKGYVGSYTKKEGKGIYIFELNEDNGEIQSVDTGYDIEASTYLAQTEQFLYAITKENEACGVAAFKKDENGQLTLINKCLASENGTGCYISVSSDHNFLFEAVYTAGIARIYQLNPDTGEVVKLIEELEHSYPTGTHERQDHNHIHFIRETPDHKYVAVTDLGADKIVTYTFGVEGFKEHAVSEFHAEDGPRHIEFHNNRTYAYVVHELSNRVSVVQYHDGKFEEIERHLTIPEDFTGETKLAAVRLSHDQQNLYISNRGHDSIAIFTVVDDGKGINPVEIVKSGGEFPRDFNITESDEYLVCAHQEGNYALTVFRRDTNSGMLIATDNQYTAPEGVFVDFLNSSL . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 42695 43741 . + . GCA_005502385.1_02191_mRNA GCA_005502385.1_02191 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTTKGYVGSYTKKEGKGIYIFELNEDNGEIQSVDTGYDIEASTYLAQTEQFLYAITKENEACGVAAFKKDENGQLTLINKCLASENGTGCYISVSSDHNFLFEAVYTAGIARIYQLNPDTGEVVKLIEELEHSYPTGTHERQDHNHIHFIRETPDHKYVAVTDLGADKIVTYTFGVEGFKEHAVSEFHAEDGPRHIEFHNNRTYAYVVHELSNRVSVVQYHDGKFEEIERHLTIPEDFTGETKLAAVRLSHDQQNLYISNRGHDSIAIFTVVDDGKGINPVEIVKSGGEFPRDFNITESDEYLVCAHQEGNYALTVFRRDTNSGMLIATDNQYTAPEGVFVDFLNSSL . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 42695 43741 . + 0 GCA_005502385.1_02191 GCA_005502385.1_02191_gene,GCA_005502385.1_02191_mRNA GCA_005502385.1_02191 putative protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTTKGYVGSYTKKEGKGIYIFELNEDNGEIQSVDTGYDIEASTYLAQTEQFLYAITKENEACGVAAFKKDENGQLTLINKCLASENGTGCYISVSSDHNFLFEAVYTAGIARIYQLNPDTGEVVKLIEELEHSYPTGTHERQDHNHIHFIRETPDHKYVAVTDLGADKIVTYTFGVEGFKEHAVSEFHAEDGPRHIEFHNNRTYAYVVHELSNRVSVVQYHDGKFEEIERHLTIPEDFTGETKLAAVRLSHDQQNLYISNRGHDSIAIFTVVDDGKGINPVEIVKSGGEFPRDFNITESDEYLVCAHQEGNYALTVFRRDTNSGMLIATDNQYTAPEGVFVDFLNSSL persistent 348 Lactonase family protein WP_019835502.1 UPI00037967E4 UniRef100_UPI00037967E4,UniRef50_Q2FWX8,UniRef90_A0A974KWF1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 43798 45180 . - . GCA_005502385.1_02192_gene GCA_005502385.1_02192 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNLIEKQFQESKQFFKTHQTKDIKFRKQQLKLLSKSIKDHETELLESLKIDLGKGSVEAYATEIGILLKSIKTARKELKNWAKTKQVDTPLFMFPSKSYIKPEPYGTILIIGPFNYPVQLLFEPLIGAIAAGNNAIIKPSELTPHVAQVVRKVIEDVFTSDFVAVVEGGVEETQTLINLPFDYIFFTGSENVGRIVYEAASKNLVPVTLELGGKSPVIVDETANIKVASDRISFGKFTNAGQTCVAPDYILVNRKVKNELIQAFKQSIEEFYGKNIQNSPDFGRIVNTKHFNRLSELLAIHRNEVIFGGHTDENEQYIEPTILDGITPQSKIMEEEIFGPLLPIIVYDDFNEAIDIIQSKSKPLSLYLFSEDENTTNCVLEELSFGGGAINDTLMHLANPNLPFGGVGASGIGEYHGKYSFDTFSHMKSYIFKSTRLDSSIIYPPYKGKFKYIRTFFKNL . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 43798 45180 . - . GCA_005502385.1_02192_mRNA GCA_005502385.1_02192 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNLIEKQFQESKQFFKTHQTKDIKFRKQQLKLLSKSIKDHETELLESLKIDLGKGSVEAYATEIGILLKSIKTARKELKNWAKTKQVDTPLFMFPSKSYIKPEPYGTILIIGPFNYPVQLLFEPLIGAIAAGNNAIIKPSELTPHVAQVVRKVIEDVFTSDFVAVVEGGVEETQTLINLPFDYIFFTGSENVGRIVYEAASKNLVPVTLELGGKSPVIVDETANIKVASDRISFGKFTNAGQTCVAPDYILVNRKVKNELIQAFKQSIEEFYGKNIQNSPDFGRIVNTKHFNRLSELLAIHRNEVIFGGHTDENEQYIEPTILDGITPQSKIMEEEIFGPLLPIIVYDDFNEAIDIIQSKSKPLSLYLFSEDENTTNCVLEELSFGGGAINDTLMHLANPNLPFGGVGASGIGEYHGKYSFDTFSHMKSYIFKSTRLDSSIIYPPYKGKFKYIRTFFKNL . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 43798 45180 . - 0 GCA_005502385.1_02192 GCA_005502385.1_02192_gene,GCA_005502385.1_02192_mRNA GCA_005502385.1_02192 4%2C4'-diaponeurosporen-aldehyde dehydrogenase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNLIEKQFQESKQFFKTHQTKDIKFRKQQLKLLSKSIKDHETELLESLKIDLGKGSVEAYATEIGILLKSIKTARKELKNWAKTKQVDTPLFMFPSKSYIKPEPYGTILIIGPFNYPVQLLFEPLIGAIAAGNNAIIKPSELTPHVAQVVRKVIEDVFTSDFVAVVEGGVEETQTLINLPFDYIFFTGSENVGRIVYEAASKNLVPVTLELGGKSPVIVDETANIKVASDRISFGKFTNAGQTCVAPDYILVNRKVKNELIQAFKQSIEEFYGKNIQNSPDFGRIVNTKHFNRLSELLAIHRNEVIFGGHTDENEQYIEPTILDGITPQSKIMEEEIFGPLLPIIVYDDFNEAIDIIQSKSKPLSLYLFSEDENTTNCVLEELSFGGGAINDTLMHLANPNLPFGGVGASGIGEYHGKYSFDTFSHMKSYIFKSTRLDSSIIYPPYKGKFKYIRTFFKNL persistent 460 Aldehyde dehydrogenase WP_019835501.1 UPI000362017B UniRef100_A0A974KWF3,UniRef50_Q2FWX9,UniRef90_A0A3S7GXD2 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 45360 46289 . - . GCA_005502385.1_02193_gene GCA_005502385.1_02193 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTKTYIFGHQNPDTDAISSAIIMADFEQQTGNSEATPYRLGEVSAETKYALDHFKVDAPTLLNDDLEGQDVILVDHNEFQQSAETIAKANIVNVVDHHRIANFETAGPLYYRAEPVGCTATILYKMYKERNFKIKPEIAGLMISAIISDSLLFKSPTCTEEDVNTAKALKDIANVDLDEYGLEMLKAGASTTDKSAEELLNMDAKSFNMGDYVTRIAQVNTVDIDEVLNRKDELEKAMLETSANEKYDLFVLVVTDIINSDSKILVVGAEKDKVGQAFNVQLDDGMAFLSGVVSRKKQVVPQITEILTK . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 45360 46289 . - . GCA_005502385.1_02193_mRNA GCA_005502385.1_02193 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTKTYIFGHQNPDTDAISSAIIMADFEQQTGNSEATPYRLGEVSAETKYALDHFKVDAPTLLNDDLEGQDVILVDHNEFQQSAETIAKANIVNVVDHHRIANFETAGPLYYRAEPVGCTATILYKMYKERNFKIKPEIAGLMISAIISDSLLFKSPTCTEEDVNTAKALKDIANVDLDEYGLEMLKAGASTTDKSAEELLNMDAKSFNMGDYVTRIAQVNTVDIDEVLNRKDELEKAMLETSANEKYDLFVLVVTDIINSDSKILVVGAEKDKVGQAFNVQLDDGMAFLSGVVSRKKQVVPQITEILTK . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 45360 46289 . - 0 GCA_005502385.1_02193 GCA_005502385.1_02193_gene,GCA_005502385.1_02193_mRNA GCA_005502385.1_02193 putative manganese-dependent inorganic pyrophosphatase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTKTYIFGHQNPDTDAISSAIIMADFEQQTGNSEATPYRLGEVSAETKYALDHFKVDAPTLLNDDLEGQDVILVDHNEFQQSAETIAKANIVNVVDHHRIANFETAGPLYYRAEPVGCTATILYKMYKERNFKIKPEIAGLMISAIISDSLLFKSPTCTEEDVNTAKALKDIANVDLDEYGLEMLKAGASTTDKSAEELLNMDAKSFNMGDYVTRIAQVNTVDIDEVLNRKDELEKAMLETSANEKYDLFVLVVTDIINSDSKILVVGAEKDKVGQAFNVQLDDGMAFLSGVVSRKKQVVPQITEILTK persistent 309 manganese-dependent inorganic pyrophosphatase 3.6.1.1 GO:0004427 WP_069723709.1 UPI000851DB37 UniRef100_UPI000851DB37,UniRef50_P37487,UniRef90_A0A3S7GX62 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 46338 46898 . - . GCA_005502385.1_02194_gene GCA_005502385.1_02194 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTNKALIVVDYSYDFIADDGRLTCGKPGQDIEQFIVERLNQYQHQHDNIFFMMDLHFEEDPYHPETKLFPPHNIEGTSGRQLYGKVKSFFDKYKNEDTVHYLDKRRYDSFYGTALDSLLRERHIDTVEIVGVCTDICVLHTAISAYNLGYHIIIPEQGVASFNEEGHQFALAHFKNSLGAKVEVIN . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 46338 46898 . - . GCA_005502385.1_02194_mRNA GCA_005502385.1_02194 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTNKALIVVDYSYDFIADDGRLTCGKPGQDIEQFIVERLNQYQHQHDNIFFMMDLHFEEDPYHPETKLFPPHNIEGTSGRQLYGKVKSFFDKYKNEDTVHYLDKRRYDSFYGTALDSLLRERHIDTVEIVGVCTDICVLHTAISAYNLGYHIIIPEQGVASFNEEGHQFALAHFKNSLGAKVEVIN . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 46338 46898 . - 0 GCA_005502385.1_02194 GCA_005502385.1_02194_gene,GCA_005502385.1_02194_mRNA GCA_005502385.1_02194 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTNKALIVVDYSYDFIADDGRLTCGKPGQDIEQFIVERLNQYQHQHDNIFFMMDLHFEEDPYHPETKLFPPHNIEGTSGRQLYGKVKSFFDKYKNEDTVHYLDKRRYDSFYGTALDSLLRERHIDTVEIVGVCTDICVLHTAISAYNLGYHIIIPEQGVASFNEEGHQFALAHFKNSLGAKVEVIN persistent 186 Cysteine hydrolase WP_002450084.1 UPI00019FB5A6 UniRef100_A0A8X8GNP7,UniRef50_O32091,UniRef90_A0A8X8GNP7 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 47035 48114 . + . GCA_005502385.1_02195_gene GCA_005502385.1_02195 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MINAQDFGLKGKHKRRDTKAIQKALNAARYGEHTVYIPSGTYYISKALVIYDHTTLILEDDTILQRHSRDALLKNGKKFGFYHGYQGNGHIKIKGGIFDMNGSKYPYNNTAMSIGHAEDIELIDITVLDVVGGHALDACGINGLYIKNCKFKGFFDVNGDRSFSEAIQLDIQVPGSFPKFGTTDGTITKNVVIEDCYFGNSNQPKMQAWNRAIGSHASRYNRFYENIHIRNNVFNGMNEYALTPLKSKTMFISNNTFINCNGGIRFLGVKDGKNAADVSTGQVQKTQAGDNLTVTGNHFEGEMKRDAIHVRSYNNVKHTNVFIAGNSFNHSTQRLHLEDISNLTFNQNDKVKVKKINID . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 47035 48114 . + . GCA_005502385.1_02195_mRNA GCA_005502385.1_02195 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MINAQDFGLKGKHKRRDTKAIQKALNAARYGEHTVYIPSGTYYISKALVIYDHTTLILEDDTILQRHSRDALLKNGKKFGFYHGYQGNGHIKIKGGIFDMNGSKYPYNNTAMSIGHAEDIELIDITVLDVVGGHALDACGINGLYIKNCKFKGFFDVNGDRSFSEAIQLDIQVPGSFPKFGTTDGTITKNVVIEDCYFGNSNQPKMQAWNRAIGSHASRYNRFYENIHIRNNVFNGMNEYALTPLKSKTMFISNNTFINCNGGIRFLGVKDGKNAADVSTGQVQKTQAGDNLTVTGNHFEGEMKRDAIHVRSYNNVKHTNVFIAGNSFNHSTQRLHLEDISNLTFNQNDKVKVKKINID . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 47035 48114 . + 0 GCA_005502385.1_02195 GCA_005502385.1_02195_gene,GCA_005502385.1_02195_mRNA GCA_005502385.1_02195 Plasmin and fibronectin-binding protein A GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MINAQDFGLKGKHKRRDTKAIQKALNAARYGEHTVYIPSGTYYISKALVIYDHTTLILEDDTILQRHSRDALLKNGKKFGFYHGYQGNGHIKIKGGIFDMNGSKYPYNNTAMSIGHAEDIELIDITVLDVVGGHALDACGINGLYIKNCKFKGFFDVNGDRSFSEAIQLDIQVPGSFPKFGTTDGTITKNVVIEDCYFGNSNQPKMQAWNRAIGSHASRYNRFYENIHIRNNVFNGMNEYALTPLKSKTMFISNNTFINCNGGIRFLGVKDGKNAADVSTGQVQKTQAGDNLTVTGNHFEGEMKRDAIHVRSYNNVKHTNVFIAGNSFNHSTQRLHLEDISNLTFNQNDKVKVKKINID persistent 359 Glycoside hydrolase family 55 protein UPI00019FB5A5 UniRef100_A0A4Q9WPJ6,UniRef50_A0A2U0IGB7,UniRef90_A0A3S7GXD3 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 48354 49913 . + . GCA_005502385.1_02196_gene GCA_005502385.1_02196 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTKQSGFRRNAQYLTFFSKKDHTNQSYSMGQLLGLILGPLLFVLILSFFHPVELPFKGVYVLGITVWIAIWWITEAIPIAATSFLPLILLPLGHVLSPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIIRYIGASTSKILLGFMIATGFLSMFVSNTAAVMIMIPIGLAIIKEANELKDDDVKSDSISKFEKSLVLAIGYSGTIGGLGTLIGTPPLIILKGQFEQHFGQEISFAKWMIVGIPTVIILIALAWAYLRFIAFRHDLKYLPGGQTLIEDKLNRLGKMSYEEKVVQAIFILASLLWITREFILKNFSITSEVADGTIAIFISILLFIFPTKSKEKHKRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKMLDGVHPLVIVIVITIFVLFLTEVTSNTATATMILPILAALSVAVGVHPMLLMVPAAMAANCAYMLPVGTPPNAIIFGSGKLSIKEMAKVGVWVNLISAVIIIVVVYFLMPYILGFDISDTLNLK . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 48354 49913 . + . GCA_005502385.1_02196_mRNA GCA_005502385.1_02196 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTKQSGFRRNAQYLTFFSKKDHTNQSYSMGQLLGLILGPLLFVLILSFFHPVELPFKGVYVLGITVWIAIWWITEAIPIAATSFLPLILLPLGHVLSPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIIRYIGASTSKILLGFMIATGFLSMFVSNTAAVMIMIPIGLAIIKEANELKDDDVKSDSISKFEKSLVLAIGYSGTIGGLGTLIGTPPLIILKGQFEQHFGQEISFAKWMIVGIPTVIILIALAWAYLRFIAFRHDLKYLPGGQTLIEDKLNRLGKMSYEEKVVQAIFILASLLWITREFILKNFSITSEVADGTIAIFISILLFIFPTKSKEKHKRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKMLDGVHPLVIVIVITIFVLFLTEVTSNTATATMILPILAALSVAVGVHPMLLMVPAAMAANCAYMLPVGTPPNAIIFGSGKLSIKEMAKVGVWVNLISAVIIIVVVYFLMPYILGFDISDTLNLK . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 48354 49913 . + 0 GCA_005502385.1_02196 GCA_005502385.1_02196_gene,GCA_005502385.1_02196_mRNA GCA_005502385.1_02196 Sodium-dependent dicarboxylate transporter SdcS GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTKQSGFRRNAQYLTFFSKKDHTNQSYSMGQLLGLILGPLLFVLILSFFHPVELPFKGVYVLGITVWIAIWWITEAIPIAATSFLPLILLPLGHVLSPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIIRYIGASTSKILLGFMIATGFLSMFVSNTAAVMIMIPIGLAIIKEANELKDDDVKSDSISKFEKSLVLAIGYSGTIGGLGTLIGTPPLIILKGQFEQHFGQEISFAKWMIVGIPTVIILIALAWAYLRFIAFRHDLKYLPGGQTLIEDKLNRLGKMSYEEKVVQAIFILASLLWITREFILKNFSITSEVADGTIAIFISILLFIFPTKSKEKHKRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKMLDGVHPLVIVIVITIFVLFLTEVTSNTATATMILPILAALSVAVGVHPMLLMVPAAMAANCAYMLPVGTPPNAIIFGSGKLSIKEMAKVGVWVNLISAVIIIVVVYFLMPYILGFDISDTLNLK persistent 519 sdcS Sodium-dependent dicarboxylate transporter SdcS UniRef50_Q2FWY4,UniRef90_A0A8X8KIS2 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 50094 50894 . - . GCA_005502385.1_02197_gene GCA_005502385.1_02197 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MHLYYLGPEGTFSYLAAKKYFSKDNFNFIPKSNLYEVIKAVNSDAQSVAIVPIENSIEGTINIVADALAQQHVFAHGEIHLDINFGLYATSDSKVENIKKVYSIAPAISQTSQYIQKHQFSYDYVDSTIQGLEKISSDVAAIVPVGSGEMYGYTAIESNIQDYPHNVTRFLVIKNDNNFESKTNNTILLITPKYDKAGLLASILTTFALFDINLSWIESRPLKTQLGMYRFFVQADTGLSDNLNKVISILETLDFSVKIIGAFHRQ . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 50094 50894 . - . GCA_005502385.1_02197_mRNA GCA_005502385.1_02197 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MHLYYLGPEGTFSYLAAKKYFSKDNFNFIPKSNLYEVIKAVNSDAQSVAIVPIENSIEGTINIVADALAQQHVFAHGEIHLDINFGLYATSDSKVENIKKVYSIAPAISQTSQYIQKHQFSYDYVDSTIQGLEKISSDVAAIVPVGSGEMYGYTAIESNIQDYPHNVTRFLVIKNDNNFESKTNNTILLITPKYDKAGLLASILTTFALFDINLSWIESRPLKTQLGMYRFFVQADTGLSDNLNKVISILETLDFSVKIIGAFHRQ . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 50094 50894 . - 0 GCA_005502385.1_02197 GCA_005502385.1_02197_gene,GCA_005502385.1_02197_mRNA GCA_005502385.1_02197 Bifunctional chorismate mutase/prephenate dehydratase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MHLYYLGPEGTFSYLAAKKYFSKDNFNFIPKSNLYEVIKAVNSDAQSVAIVPIENSIEGTINIVADALAQQHVFAHGEIHLDINFGLYATSDSKVENIKKVYSIAPAISQTSQYIQKHQFSYDYVDSTIQGLEKISSDVAAIVPVGSGEMYGYTAIESNIQDYPHNVTRFLVIKNDNNFESKTNNTILLITPKYDKAGLLASILTTFALFDINLSWIESRPLKTQLGMYRFFVQADTGLSDNLNKVISILETLDFSVKIIGAFHRQ persistent 266 pheA prephenate dehydratase 4.2.1.51 GO:0004664,GO:0009094 WP_069723707.1 UPI000851A201 UniRef100_UPI000851A201,UniRef50_A0A0E7Y8C1,UniRef90_A0A3S7H0J9 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 50925 51992 . - . GCA_005502385.1_02198_gene GCA_005502385.1_02198 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MLLEEAKNFIQTMYGELNYSNHIISKRITEIEKEINQTGTYTHTYEELNYGAKMAWRNSNRCVGRLFWESLNVVDARDIYTEQHFLDALHNHLSKATNGGKIKPYITIFSSTDAPKIYNNQLIRYAGYEDKGDPSEREITQLANHLGWKGKGSDFDVLPLIYQLPNSPIKYHEFPASLIKEVDIEHDQFPKLKDLHLKWYGVPIISNMDLKIGGITYPTAPFNGWYMVTEIAVRNFTDTYRYNLLEKVAETFEFGTLKNNSFNKDRTLVELNYAVYHSFKSQGVSIVDHLTAAKQFELFEEKEEQHHRDVTGKWSWLAPPLSPTLTANYHHGYKNIIKDPNFHYKKAIPMKCPFH . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 50925 51992 . - . GCA_005502385.1_02198_mRNA GCA_005502385.1_02198 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MLLEEAKNFIQTMYGELNYSNHIISKRITEIEKEINQTGTYTHTYEELNYGAKMAWRNSNRCVGRLFWESLNVVDARDIYTEQHFLDALHNHLSKATNGGKIKPYITIFSSTDAPKIYNNQLIRYAGYEDKGDPSEREITQLANHLGWKGKGSDFDVLPLIYQLPNSPIKYHEFPASLIKEVDIEHDQFPKLKDLHLKWYGVPIISNMDLKIGGITYPTAPFNGWYMVTEIAVRNFTDTYRYNLLEKVAETFEFGTLKNNSFNKDRTLVELNYAVYHSFKSQGVSIVDHLTAAKQFELFEEKEEQHHRDVTGKWSWLAPPLSPTLTANYHHGYKNIIKDPNFHYKKAIPMKCPFH . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 50925 51992 . - 0 GCA_005502385.1_02198 GCA_005502385.1_02198_gene,GCA_005502385.1_02198_mRNA GCA_005502385.1_02198 Nitric oxide synthase oxygenase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MLLEEAKNFIQTMYGELNYSNHIISKRITEIEKEINQTGTYTHTYEELNYGAKMAWRNSNRCVGRLFWESLNVVDARDIYTEQHFLDALHNHLSKATNGGKIKPYITIFSSTDAPKIYNNQLIRYAGYEDKGDPSEREITQLANHLGWKGKGSDFDVLPLIYQLPNSPIKYHEFPASLIKEVDIEHDQFPKLKDLHLKWYGVPIISNMDLKIGGITYPTAPFNGWYMVTEIAVRNFTDTYRYNLLEKVAETFEFGTLKNNSFNKDRTLVELNYAVYHSFKSQGVSIVDHLTAAKQFELFEEKEEQHHRDVTGKWSWLAPPLSPTLTANYHHGYKNIIKDPNFHYKKAIPMKCPFH persistent 355 Nitric oxide synthase oxygenase WP_017175252.1 UPI0002E04732 UniRef100_A0A3S7GWU1,UniRef50_Q6GFE2,UniRef90_A0A3S7GWU1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 52171 53640 . + . GCA_005502385.1_02199_gene GCA_005502385.1_02199 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MYRYEDDSLMLHNDLYQINMAESYWNDGIHERNAVFDLYFRNMPFGSGYAVFNGLKRMIQFIENFHFSDSDIEYLQSIGYKNDFLKYLKNLKFTGNIRAMQEGELCFGNEPLLRVEAPLIQAQLIETILLNIVNFHTLITTKASRIRQVAPQDTLMEFGTRRAQEIDAAVWGARAAYIGGFDSTSNVRAGKLFGIPVSGTHAHALVQTYGDEYKAFKIYAERHKNCVFLVDTFHTLKSGVPTAIKVAKELGDSINFIGIRLDSGDIAYLSKKARRMLDDAGFKDAKIIASNDLDEQTITSLKAQGAKVDSWGVGTKLITGYDQPALGAVYKLVAVENNKGEYVDRIKLSNNAEKVTTPGKKKVYRIINTKTGKAEGDYITLEHENPNKEKPLKMFHPVHTYKMKHVKHFEAVDLHHSIFENGKLVYDLPSEKETQDYLKQSLSRLWEENKRYLNPQEYPVDLSTSCWNNKQKRILEVAEHVKEMEEDND . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 52171 53640 . + . GCA_005502385.1_02199_mRNA GCA_005502385.1_02199 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MYRYEDDSLMLHNDLYQINMAESYWNDGIHERNAVFDLYFRNMPFGSGYAVFNGLKRMIQFIENFHFSDSDIEYLQSIGYKNDFLKYLKNLKFTGNIRAMQEGELCFGNEPLLRVEAPLIQAQLIETILLNIVNFHTLITTKASRIRQVAPQDTLMEFGTRRAQEIDAAVWGARAAYIGGFDSTSNVRAGKLFGIPVSGTHAHALVQTYGDEYKAFKIYAERHKNCVFLVDTFHTLKSGVPTAIKVAKELGDSINFIGIRLDSGDIAYLSKKARRMLDDAGFKDAKIIASNDLDEQTITSLKAQGAKVDSWGVGTKLITGYDQPALGAVYKLVAVENNKGEYVDRIKLSNNAEKVTTPGKKKVYRIINTKTGKAEGDYITLEHENPNKEKPLKMFHPVHTYKMKHVKHFEAVDLHHSIFENGKLVYDLPSEKETQDYLKQSLSRLWEENKRYLNPQEYPVDLSTSCWNNKQKRILEVAEHVKEMEEDND . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 52171 53640 . + 0 GCA_005502385.1_02199 GCA_005502385.1_02199_gene,GCA_005502385.1_02199_mRNA GCA_005502385.1_02199 Nicotinate phosphoribosyltransferase pncB2 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MYRYEDDSLMLHNDLYQINMAESYWNDGIHERNAVFDLYFRNMPFGSGYAVFNGLKRMIQFIENFHFSDSDIEYLQSIGYKNDFLKYLKNLKFTGNIRAMQEGELCFGNEPLLRVEAPLIQAQLIETILLNIVNFHTLITTKASRIRQVAPQDTLMEFGTRRAQEIDAAVWGARAAYIGGFDSTSNVRAGKLFGIPVSGTHAHALVQTYGDEYKAFKIYAERHKNCVFLVDTFHTLKSGVPTAIKVAKELGDSINFIGIRLDSGDIAYLSKKARRMLDDAGFKDAKIIASNDLDEQTITSLKAQGAKVDSWGVGTKLITGYDQPALGAVYKLVAVENNKGEYVDRIKLSNNAEKVTTPGKKKVYRIINTKTGKAEGDYITLEHENPNKEKPLKMFHPVHTYKMKHVKHFEAVDLHHSIFENGKLVYDLPSEKETQDYLKQSLSRLWEENKRYLNPQEYPVDLSTSCWNNKQKRILEVAEHVKEMEEDND persistent 489 pncB nicotinate phosphoribosyltransferase 6.3.4.21 GO:0004516,GO:0009435 COG1488,H WP_049382578.1 UPI00066E7959 UniRef100_UPI00066E7959,UniRef50_H3SMK9,UniRef90_Q4L7M7 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 53633 54469 . + . GCA_005502385.1_02200_gene GCA_005502385.1_02200 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTNLQDIVVKEMKVKKHIDSQQEIREIIQFIKNYVQSHTFIKSLVLGISGGQDSTLTGKLAQLAVEELRKEGRECQFIAVKLPYGKQKDADEVEDALHFIQPDEVITVNIKPAVDQSVASLKEAGIELTDFQRGNEKARERMKVQFSIASNRSGIVLGTDHSAENITGFYTKYGDGAADIAPIFGLDKRQGRQLLEYLEAPTHLYEKVPTADLEDDKPQLPDEEALGVTYNQIDDYLEGKEVPSDAKTTIENHYVKNAHKRELAYTRYTWPKHSHTKE . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 53633 54469 . + . GCA_005502385.1_02200_mRNA GCA_005502385.1_02200 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTNLQDIVVKEMKVKKHIDSQQEIREIIQFIKNYVQSHTFIKSLVLGISGGQDSTLTGKLAQLAVEELRKEGRECQFIAVKLPYGKQKDADEVEDALHFIQPDEVITVNIKPAVDQSVASLKEAGIELTDFQRGNEKARERMKVQFSIASNRSGIVLGTDHSAENITGFYTKYGDGAADIAPIFGLDKRQGRQLLEYLEAPTHLYEKVPTADLEDDKPQLPDEEALGVTYNQIDDYLEGKEVPSDAKTTIENHYVKNAHKRELAYTRYTWPKHSHTKE . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 53633 54469 . + 0 GCA_005502385.1_02200 GCA_005502385.1_02200_gene,GCA_005502385.1_02200_mRNA GCA_005502385.1_02200 NH(3)-dependent NAD(+) synthetase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTNLQDIVVKEMKVKKHIDSQQEIREIIQFIKNYVQSHTFIKSLVLGISGGQDSTLTGKLAQLAVEELRKEGRECQFIAVKLPYGKQKDADEVEDALHFIQPDEVITVNIKPAVDQSVASLKEAGIELTDFQRGNEKARERMKVQFSIASNRSGIVLGTDHSAENITGFYTKYGDGAADIAPIFGLDKRQGRQLLEYLEAPTHLYEKVPTADLEDDKPQLPDEEALGVTYNQIDDYLEGKEVPSDAKTTIENHYVKNAHKRELAYTRYTWPKHSHTKE persistent 278 nadE ammonia-dependent NAD(+) synthetase 6.3.1.5 GO:0003952,GO:0004359,GO:0008795,GO:0009435 WP_049382579.1 UPI00066CB6B2 UniRef100_UPI00066CB6B2,UniRef50_P18843,UniRef90_A0A380G0G7 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 54580 55185 . + . GCA_005502385.1_02201_gene GCA_005502385.1_02201 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MSVITSNPWIMVLAIFIINVFYVTFLTMRTILTLKGYRYMAAVVSFLEVLIYVVGLGLVMSSLDQIQNIIAYAFGFSIGIIVGMKIEEKLALGYTVVNVTSAEYELDLPKELRNLGYGVTHYEAHGRDGSRMVMQILTPRRYERKLMETVRSLDEKAFIIAYEPRAIHGGFWTKGVRTKKVKAYEVEEIESVVEHSEVQGK . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 54580 55185 . + . GCA_005502385.1_02201_mRNA GCA_005502385.1_02201 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MSVITSNPWIMVLAIFIINVFYVTFLTMRTILTLKGYRYMAAVVSFLEVLIYVVGLGLVMSSLDQIQNIIAYAFGFSIGIIVGMKIEEKLALGYTVVNVTSAEYELDLPKELRNLGYGVTHYEAHGRDGSRMVMQILTPRRYERKLMETVRSLDEKAFIIAYEPRAIHGGFWTKGVRTKKVKAYEVEEIESVVEHSEVQGK . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 54580 55185 . + 0 GCA_005502385.1_02201 GCA_005502385.1_02201_gene,GCA_005502385.1_02201_mRNA GCA_005502385.1_02201 hypothetical protein UPF0316 protein SA1727 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MSVITSNPWIMVLAIFIINVFYVTFLTMRTILTLKGYRYMAAVVSFLEVLIYVVGLGLVMSSLDQIQNIIAYAFGFSIGIIVGMKIEEKLALGYTVVNVTSAEYELDLPKELRNLGYGVTHYEAHGRDGSRMVMQILTPRRYERKLMETVRSLDEKAFIIAYEPRAIHGGFWTKGVRTKKVKAYEVEEIESVVEHSEVQGK persistent 201 yebE UPF0316 protein SH1041 GO:0005886 COG4843,S WP_002450021.1 UPI00019FB3C0 UniRef100_A0A974QMR9,UniRef50_Q2G2R9,UniRef90_Q4L7M5 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 55166 55348 . + . GCA_005502385.1_02202_gene GCA_005502385.1_02202 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKFKVNENETISDCIARMRKEGYMPVRRIEKPVYFEDKQGNIKILRQDIQFVGKKIENDI . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 55166 55348 . + . GCA_005502385.1_02202_mRNA GCA_005502385.1_02202 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKFKVNENETISDCIARMRKEGYMPVRRIEKPVYFEDKQGNIKILRQDIQFVGKKIENDI . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 55166 55348 . + 0 GCA_005502385.1_02202 GCA_005502385.1_02202_gene,GCA_005502385.1_02202_mRNA GCA_005502385.1_02202 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKFKVNENETISDCIARMRKEGYMPVRRIEKPVYFEDKQGNIKILRQDIQFVGKKIENDI persistent 60 NETI motif-containing protein WP_002455112.1 UPI0001EF50A3 UniRef100_A0A2A1M9S6,UniRef50_A0A0U1MPT6,UniRef90_A0A2A1M9S6 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 55571 56866 . + . GCA_005502385.1_02203_gene GCA_005502385.1_02203 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MIERYSREEMSSIWTDQNRYEAWLEVEILACEAWSELGYIPKDDVKKIRENAKVDVNRAKEIEQETRHDVVAFTRQVSETLGEERKWVHYGLTSTDVVDTALSYVIKQANEIIEKDIERFIKVLEEKAKKYKYTLMMGRTHGVHAEPTTFGVKMALWYTEMKRNLKRFKEVRKEIEVGKMSGAVGTFANIPPEIESYVCKHLGIDTAPVSTQTLQRDRHAYYIATLALIATSLEKFAVEVRNLQKTETREVEEAFAKGQKGSSAMPHKRNPIGSENITGISRVIRGYITTAYENVPLWHERDISHSSAERIMLPDVTIALDYALNRFTNIIDRLTVFEDNMRNNINKTFGLIFSQRVLLALINKGMVREEAYDRVQPKAMKSWETKTPFRELIEQDSTITNVLSKEELDECFDPKHHLNQVDTIFKRANLE . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 55571 56866 . + . GCA_005502385.1_02203_mRNA GCA_005502385.1_02203 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MIERYSREEMSSIWTDQNRYEAWLEVEILACEAWSELGYIPKDDVKKIRENAKVDVNRAKEIEQETRHDVVAFTRQVSETLGEERKWVHYGLTSTDVVDTALSYVIKQANEIIEKDIERFIKVLEEKAKKYKYTLMMGRTHGVHAEPTTFGVKMALWYTEMKRNLKRFKEVRKEIEVGKMSGAVGTFANIPPEIESYVCKHLGIDTAPVSTQTLQRDRHAYYIATLALIATSLEKFAVEVRNLQKTETREVEEAFAKGQKGSSAMPHKRNPIGSENITGISRVIRGYITTAYENVPLWHERDISHSSAERIMLPDVTIALDYALNRFTNIIDRLTVFEDNMRNNINKTFGLIFSQRVLLALINKGMVREEAYDRVQPKAMKSWETKTPFRELIEQDSTITNVLSKEELDECFDPKHHLNQVDTIFKRANLE . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 55571 56866 . + 0 GCA_005502385.1_02203 GCA_005502385.1_02203_gene,GCA_005502385.1_02203_mRNA GCA_005502385.1_02203 Adenylosuccinate lyase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MIERYSREEMSSIWTDQNRYEAWLEVEILACEAWSELGYIPKDDVKKIRENAKVDVNRAKEIEQETRHDVVAFTRQVSETLGEERKWVHYGLTSTDVVDTALSYVIKQANEIIEKDIERFIKVLEEKAKKYKYTLMMGRTHGVHAEPTTFGVKMALWYTEMKRNLKRFKEVRKEIEVGKMSGAVGTFANIPPEIESYVCKHLGIDTAPVSTQTLQRDRHAYYIATLALIATSLEKFAVEVRNLQKTETREVEEAFAKGQKGSSAMPHKRNPIGSENITGISRVIRGYITTAYENVPLWHERDISHSSAERIMLPDVTIALDYALNRFTNIIDRLTVFEDNMRNNINKTFGLIFSQRVLLALINKGMVREEAYDRVQPKAMKSWETKTPFRELIEQDSTITNVLSKEELDECFDPKHHLNQVDTIFKRANLE persistent 431 purB adenylosuccinate lyase 4.3.2.2 GO:0004018,GO:0005829,GO:0006189,GO:0009152,GO:0044208,GO:0070626 COG0015,F WP_049379618.1 UPI00066AB0C4 UniRef100_UPI00066AB0C4,UniRef50_Q2G2S0,UniRef90_Q2G2S0 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 56972 57274 . + . GCA_005502385.1_02204_gene GCA_005502385.1_02204 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MQIEKLRGEALDELFDAILTLKDREECYQFFDDLCTVNEIQSLSQRLQVAKMIKQGFTYATIEKKSGASTATISRVKRSLQWGNDAYTMILDRLNVETKE . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 56972 57274 . + . GCA_005502385.1_02204_mRNA GCA_005502385.1_02204 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MQIEKLRGEALDELFDAILTLKDREECYQFFDDLCTVNEIQSLSQRLQVAKMIKQGFTYATIEKKSGASTATISRVKRSLQWGNDAYTMILDRLNVETKE . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 56972 57274 . + 0 GCA_005502385.1_02204 GCA_005502385.1_02204_gene,GCA_005502385.1_02204_mRNA GCA_005502385.1_02204 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MQIEKLRGEALDELFDAILTLKDREECYQFFDDLCTVNEIQSLSQRLQVAKMIKQGFTYATIEKKSGASTATISRVKRSLQWGNDAYTMILDRLNVETKE persistent 100 yerC His repressor COG4496,R WP_017175247.1 UPI0002D90895 UniRef100_A0A4V2KX42,UniRef50_Q7BVT7,UniRef90_Q2G1Y1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 57434 58126 . + . GCA_005502385.1_02205_gene GCA_005502385.1_02205 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MYDIRKWQHVFKLDPAKEISDENLEALCMSDTDAIMIGGTDDVTEDNVIHLMSRVRRYPLPLVLEVSNLDSVMPGFDFYFIPSILNSNDVTYHNGLLHKALKQYGHMINFEEVMLEGYVVLNPDSKVAKLTQSNTQLDVEDIEAYAQLVEEMYKLPILYLEYSGTYGDKDIVKAASQMLTHTQLFYGGGISSLTEAKEMKNYADTIIVGNIIYSDIKKALKTVKIKKESK . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 57434 58126 . + . GCA_005502385.1_02205_mRNA GCA_005502385.1_02205 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MYDIRKWQHVFKLDPAKEISDENLEALCMSDTDAIMIGGTDDVTEDNVIHLMSRVRRYPLPLVLEVSNLDSVMPGFDFYFIPSILNSNDVTYHNGLLHKALKQYGHMINFEEVMLEGYVVLNPDSKVAKLTQSNTQLDVEDIEAYAQLVEEMYKLPILYLEYSGTYGDKDIVKAASQMLTHTQLFYGGGISSLTEAKEMKNYADTIIVGNIIYSDIKKALKTVKIKKESK . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 57434 58126 . + 0 GCA_005502385.1_02205 GCA_005502385.1_02205_gene,GCA_005502385.1_02205_mRNA GCA_005502385.1_02205 Heptaprenylglyceryl phosphate synthase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MYDIRKWQHVFKLDPAKEISDENLEALCMSDTDAIMIGGTDDVTEDNVIHLMSRVRRYPLPLVLEVSNLDSVMPGFDFYFIPSILNSNDVTYHNGLLHKALKQYGHMINFEEVMLEGYVVLNPDSKVAKLTQSNTQLDVEDIEAYAQLVEEMYKLPILYLEYSGTYGDKDIVKAASQMLTHTQLFYGGGISSLTEAKEMKNYADTIIVGNIIYSDIKKALKTVKIKKESK persistent 230 heptaprenylglyceryl phosphate synthase 2.5.1.-,2.5.1.n9 WP_017175246.1 UPI0002FD4C5E UniRef100_A0A1L8Y828,UniRef50_Q5L3C1,UniRef90_A0A1L8Y828 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 58126 60318 . + . GCA_005502385.1_02206_gene GCA_005502385.1_02206 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNALVSNMNKEQSEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNILAITFTNKAAKEMKERVEHLVGEEAQVIWMSTFHSMCVKILRRDADRIGIERNFTIIDPTDQKSVIKDVLKNENIDSKRFEPRMFIGAISNLKNELKTPEDAMKEANDFHSQMVATVYSGYQRQLSRNEALDFDDLIMKTIRLFERVPDALEYYQNKFQYIHVDEYQDTNKAQYTLVKLLASKFKNLCVVGDSDQSIYGWRGADIQNILSFEEDYPEAKTIFLEQNYRSTKTILTAANEVIKHNTERKPKGLWTANNGGEKIKYYEAMTERDEAEYVVREIIKHRKSGKDYNDMAILYRTNAQSRVLEETFMKSNIPYTMVGGQKFYDRKEIKDLLSYLRIVANSNDDISLQRIINVPKRGIGPSSVDKIQRYALDNNISMFDALGEVDFIGLSKKVTQECIQFYEMVQNLIKEQEFLEISEIVEEILEKSGYRQMLEHEQTIESRSRLENIDEFMSVPKDYEKDTPLEEQSLINFLTDLSLVADIDEAQIDSGVTLMTMHSAKGLEFPIVFLMGMEESLFPHIRAIKSDDEHEMEEERRICYVAITRAEEVLYITHATSRMLFGRSQANLPSRFLKEIPEELLETPAKSKRQTITSKSTTPSKRGFSKRTTSTKKQVSASDWKVGDKVTHKSWGEGMVSNVSEKNGSVELDIIFKSEGPKRLLAQFAPIEKKED . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 58126 60318 . + . GCA_005502385.1_02206_mRNA GCA_005502385.1_02206 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNALVSNMNKEQSEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNILAITFTNKAAKEMKERVEHLVGEEAQVIWMSTFHSMCVKILRRDADRIGIERNFTIIDPTDQKSVIKDVLKNENIDSKRFEPRMFIGAISNLKNELKTPEDAMKEANDFHSQMVATVYSGYQRQLSRNEALDFDDLIMKTIRLFERVPDALEYYQNKFQYIHVDEYQDTNKAQYTLVKLLASKFKNLCVVGDSDQSIYGWRGADIQNILSFEEDYPEAKTIFLEQNYRSTKTILTAANEVIKHNTERKPKGLWTANNGGEKIKYYEAMTERDEAEYVVREIIKHRKSGKDYNDMAILYRTNAQSRVLEETFMKSNIPYTMVGGQKFYDRKEIKDLLSYLRIVANSNDDISLQRIINVPKRGIGPSSVDKIQRYALDNNISMFDALGEVDFIGLSKKVTQECIQFYEMVQNLIKEQEFLEISEIVEEILEKSGYRQMLEHEQTIESRSRLENIDEFMSVPKDYEKDTPLEEQSLINFLTDLSLVADIDEAQIDSGVTLMTMHSAKGLEFPIVFLMGMEESLFPHIRAIKSDDEHEMEEERRICYVAITRAEEVLYITHATSRMLFGRSQANLPSRFLKEIPEELLETPAKSKRQTITSKSTTPSKRGFSKRTTSTKKQVSASDWKVGDKVTHKSWGEGMVSNVSEKNGSVELDIIFKSEGPKRLLAQFAPIEKKED . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 58126 60318 . + 0 GCA_005502385.1_02206 GCA_005502385.1_02206_gene,GCA_005502385.1_02206_mRNA GCA_005502385.1_02206 ATP-dependent DNA helicase PcrA GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNALVSNMNKEQSEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNILAITFTNKAAKEMKERVEHLVGEEAQVIWMSTFHSMCVKILRRDADRIGIERNFTIIDPTDQKSVIKDVLKNENIDSKRFEPRMFIGAISNLKNELKTPEDAMKEANDFHSQMVATVYSGYQRQLSRNEALDFDDLIMKTIRLFERVPDALEYYQNKFQYIHVDEYQDTNKAQYTLVKLLASKFKNLCVVGDSDQSIYGWRGADIQNILSFEEDYPEAKTIFLEQNYRSTKTILTAANEVIKHNTERKPKGLWTANNGGEKIKYYEAMTERDEAEYVVREIIKHRKSGKDYNDMAILYRTNAQSRVLEETFMKSNIPYTMVGGQKFYDRKEIKDLLSYLRIVANSNDDISLQRIINVPKRGIGPSSVDKIQRYALDNNISMFDALGEVDFIGLSKKVTQECIQFYEMVQNLIKEQEFLEISEIVEEILEKSGYRQMLEHEQTIESRSRLENIDEFMSVPKDYEKDTPLEEQSLINFLTDLSLVADIDEAQIDSGVTLMTMHSAKGLEFPIVFLMGMEESLFPHIRAIKSDDEHEMEEERRICYVAITRAEEVLYITHATSRMLFGRSQANLPSRFLKEIPEELLETPAKSKRQTITSKSTTPSKRGFSKRTTSTKKQVSASDWKVGDKVTHKSWGEGMVSNVSEKNGSVELDIIFKSEGPKRLLAQFAPIEKKED persistent 730 pcrA DNA helicase PcrA 3.6.4.12 GO:0003678,GO:0005737,GO:0006268,GO:0006281 COG0210,L WP_019835663.1 UPI000374BC79 UniRef100_UPI000374BC79,UniRef50_Q53727,UniRef90_A0A5B2YRX8 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 60322 62325 . + . GCA_005502385.1_02207_gene GCA_005502385.1_02207 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MDNIQNRVNELHDLLNQYSYEYYVKDNPSVPDSEYDKLLRELIDIENAHPELKTDDSPTVRVGGEAQSSFEKVNHETPMLSLGNAFNEEELRRFDERIREHIGKVEYMCELKIDGLAVSLKYEDGRFVQGLTRGDGTTGEDITENLRTIHAIPLKIKEPLNVEVRGEAYMPRRSFMRLNDEREKNEEQPFANPRNAAAGSLRQLDPKLAAKRKLSVFLYSVNDFTDFNATTQSDALDELDRLGFKTNHERARVEDIEGVLEYIKKWTKQREQLSYDIDGIVIKVNDLDQQDEMGFTQKSPRWAIAYKFPAEEVVTELKDIELSIGRTGVVTPTAILEPIRVAGTTVSRASLHNEDLIKERDIRIGDSVIVKKAGDIIPEVVRSIIDRRPNDAKPYRMPTHCPSCGHELVRIEGEVALRCINPKCQAQLVEGLIHFVSRQAMNIDGLGNKIIQQLYHHQLIKDVGDIFYLTKEDLLPLERMGTKKVENLLSAIEHAKQNSLEHLLFGLGIRHLGAKASQILAEKFETMDRLLKVTEEELIAIHDIGDKLAQSVVTYLDNEDIKALIEKLKDKNVNMTYKGVKSSEIEGHPEFQNKTIVLTGKLQQMTRKEATTWLEMQGAKVTSSVTKSTDLVIAGEDAGSKLSKAEQFGTEIWSESQFIEKQNEISE . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 60322 62325 . + . GCA_005502385.1_02207_mRNA GCA_005502385.1_02207 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MDNIQNRVNELHDLLNQYSYEYYVKDNPSVPDSEYDKLLRELIDIENAHPELKTDDSPTVRVGGEAQSSFEKVNHETPMLSLGNAFNEEELRRFDERIREHIGKVEYMCELKIDGLAVSLKYEDGRFVQGLTRGDGTTGEDITENLRTIHAIPLKIKEPLNVEVRGEAYMPRRSFMRLNDEREKNEEQPFANPRNAAAGSLRQLDPKLAAKRKLSVFLYSVNDFTDFNATTQSDALDELDRLGFKTNHERARVEDIEGVLEYIKKWTKQREQLSYDIDGIVIKVNDLDQQDEMGFTQKSPRWAIAYKFPAEEVVTELKDIELSIGRTGVVTPTAILEPIRVAGTTVSRASLHNEDLIKERDIRIGDSVIVKKAGDIIPEVVRSIIDRRPNDAKPYRMPTHCPSCGHELVRIEGEVALRCINPKCQAQLVEGLIHFVSRQAMNIDGLGNKIIQQLYHHQLIKDVGDIFYLTKEDLLPLERMGTKKVENLLSAIEHAKQNSLEHLLFGLGIRHLGAKASQILAEKFETMDRLLKVTEEELIAIHDIGDKLAQSVVTYLDNEDIKALIEKLKDKNVNMTYKGVKSSEIEGHPEFQNKTIVLTGKLQQMTRKEATTWLEMQGAKVTSSVTKSTDLVIAGEDAGSKLSKAEQFGTEIWSESQFIEKQNEISE . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 60322 62325 . + 0 GCA_005502385.1_02207 GCA_005502385.1_02207_gene,GCA_005502385.1_02207_mRNA GCA_005502385.1_02207 DNA ligase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MDNIQNRVNELHDLLNQYSYEYYVKDNPSVPDSEYDKLLRELIDIENAHPELKTDDSPTVRVGGEAQSSFEKVNHETPMLSLGNAFNEEELRRFDERIREHIGKVEYMCELKIDGLAVSLKYEDGRFVQGLTRGDGTTGEDITENLRTIHAIPLKIKEPLNVEVRGEAYMPRRSFMRLNDEREKNEEQPFANPRNAAAGSLRQLDPKLAAKRKLSVFLYSVNDFTDFNATTQSDALDELDRLGFKTNHERARVEDIEGVLEYIKKWTKQREQLSYDIDGIVIKVNDLDQQDEMGFTQKSPRWAIAYKFPAEEVVTELKDIELSIGRTGVVTPTAILEPIRVAGTTVSRASLHNEDLIKERDIRIGDSVIVKKAGDIIPEVVRSIIDRRPNDAKPYRMPTHCPSCGHELVRIEGEVALRCINPKCQAQLVEGLIHFVSRQAMNIDGLGNKIIQQLYHHQLIKDVGDIFYLTKEDLLPLERMGTKKVENLLSAIEHAKQNSLEHLLFGLGIRHLGAKASQILAEKFETMDRLLKVTEEELIAIHDIGDKLAQSVVTYLDNEDIKALIEKLKDKNVNMTYKGVKSSEIEGHPEFQNKTIVLTGKLQQMTRKEATTWLEMQGAKVTSSVTKSTDLVIAGEDAGSKLSKAEQFGTEIWSESQFIEKQNEISE persistent 667 ligA NAD-dependent DNA ligase LigA 6.5.1.2 GO:0003677,GO:0003911,GO:0006260,GO:0006281 WP_019835662.1 UPI000379C2C9 UniRef100_UPI000379C2C9,UniRef50_Q837V6,UniRef90_A0A549VW38 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 62337 63536 . + . GCA_005502385.1_02208_gene GCA_005502385.1_02208 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKRLLLLVITSLMILTACGNGNDKNSQSNNKQQEQNSNNVKTVATDQEVQGDNYRTILPFKESQARGVLQDNMANSYNGEDFENGLLHLSKSVFPTDNFLYQDGQYLDKNTVNAYLNPKYSKDEIDNMSESEKESKKATENLGLNPSHDGETKPEKIAESSPAYLSNILEQDFYDTNDTKGKTIKGITIGLAMNSVYYYQKEKDGETYSKSLDNKEIEKQGKAMAQELLTRLRANKDLKNIPIHFAIYVQSSQDAITPGHFIANTTVDDKQTKINKWNKIDEISALLPSTEAEKYDKNLNNNFKQFNDDLQSYFSNFTQAIGKVKFVDKKPNKLVIDLPIDYYGQAETIGITQYVTEQAKKYFDNIDSYEIRIKDGNNSRALISKTKDDKDPQVHIYSN . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 62337 63536 . + . GCA_005502385.1_02208_mRNA GCA_005502385.1_02208 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKRLLLLVITSLMILTACGNGNDKNSQSNNKQQEQNSNNVKTVATDQEVQGDNYRTILPFKESQARGVLQDNMANSYNGEDFENGLLHLSKSVFPTDNFLYQDGQYLDKNTVNAYLNPKYSKDEIDNMSESEKESKKATENLGLNPSHDGETKPEKIAESSPAYLSNILEQDFYDTNDTKGKTIKGITIGLAMNSVYYYQKEKDGETYSKSLDNKEIEKQGKAMAQELLTRLRANKDLKNIPIHFAIYVQSSQDAITPGHFIANTTVDDKQTKINKWNKIDEISALLPSTEAEKYDKNLNNNFKQFNDDLQSYFSNFTQAIGKVKFVDKKPNKLVIDLPIDYYGQAETIGITQYVTEQAKKYFDNIDSYEIRIKDGNNSRALISKTKDDKDPQVHIYSN . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 62337 63536 . + 0 GCA_005502385.1_02208 GCA_005502385.1_02208_gene,GCA_005502385.1_02208_mRNA GCA_005502385.1_02208 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKRLLLLVITSLMILTACGNGNDKNSQSNNKQQEQNSNNVKTVATDQEVQGDNYRTILPFKESQARGVLQDNMANSYNGEDFENGLLHLSKSVFPTDNFLYQDGQYLDKNTVNAYLNPKYSKDEIDNMSESEKESKKATENLGLNPSHDGETKPEKIAESSPAYLSNILEQDFYDTNDTKGKTIKGITIGLAMNSVYYYQKEKDGETYSKSLDNKEIEKQGKAMAQELLTRLRANKDLKNIPIHFAIYVQSSQDAITPGHFIANTTVDDKQTKINKWNKIDEISALLPSTEAEKYDKNLNNNFKQFNDDLQSYFSNFTQAIGKVKFVDKKPNKLVIDLPIDYYGQAETIGITQYVTEQAKKYFDNIDSYEIRIKDGNNSRALISKTKDDKDPQVHIYSN persistent 399 camS CamS family sex pheromone protein WP_017175243.1 UPI0003025B50 UniRef100_A0A8X8GLH9,UniRef50_Q2FWY6,UniRef90_A0AAE5JJH9 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 63596 65134 . - . GCA_005502385.1_02209_gene GCA_005502385.1_02209 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MFVLGANLGTHANTSWQTYIMIAIYFIILLVIGYYGYKQATGNLSEYMLGGRNIGPYITALSAGASDMSGWMIMGLPGSVYSTGLSAIWITIGLTIGAYVNYLVVAPRLRVYTEVAGDAITLPDFFKNRLNDKHNIIKIISGLIIVIFFTLYTHSGFVSGGKLFESAFGLNYHWGLISVAIIVILYTFFGGYLAVSITDFFQGVIMLIAMVMVPIVALMQLSGWDTFHQVAEMKPTNMDLFRGTTFLGMISLFAWGLGYFGQPHIIVRFMSIKSHKLLPKARRLGISWMIVGLLGAVGVGLTGIAFISKNHIKMDDPETLFIIMSQVLFHPLVGGFLLAAILAAIMSTISSQLLVTSSSLTEDFYKLIRGEEHAQSHQKEFVLVGRLSVLAVAIVALAIAWSPNDTILNLVGNAWAGFGAAFSPLVLFSLYWKKLTRAGAISGMIAGALVVIIWIVWVKPLANINELFGMYEIIPGFISSVIVTYLVSIFTYKSNYSIEQQLNQVKTIVREK . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 63596 65134 . - . GCA_005502385.1_02209_mRNA GCA_005502385.1_02209 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MFVLGANLGTHANTSWQTYIMIAIYFIILLVIGYYGYKQATGNLSEYMLGGRNIGPYITALSAGASDMSGWMIMGLPGSVYSTGLSAIWITIGLTIGAYVNYLVVAPRLRVYTEVAGDAITLPDFFKNRLNDKHNIIKIISGLIIVIFFTLYTHSGFVSGGKLFESAFGLNYHWGLISVAIIVILYTFFGGYLAVSITDFFQGVIMLIAMVMVPIVALMQLSGWDTFHQVAEMKPTNMDLFRGTTFLGMISLFAWGLGYFGQPHIIVRFMSIKSHKLLPKARRLGISWMIVGLLGAVGVGLTGIAFISKNHIKMDDPETLFIIMSQVLFHPLVGGFLLAAILAAIMSTISSQLLVTSSSLTEDFYKLIRGEEHAQSHQKEFVLVGRLSVLAVAIVALAIAWSPNDTILNLVGNAWAGFGAAFSPLVLFSLYWKKLTRAGAISGMIAGALVVIIWIVWVKPLANINELFGMYEIIPGFISSVIVTYLVSIFTYKSNYSIEQQLNQVKTIVREK . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 63596 65134 . - 0 GCA_005502385.1_02209 GCA_005502385.1_02209_gene,GCA_005502385.1_02209_mRNA GCA_005502385.1_02209 Sodium/proline symporter GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MFVLGANLGTHANTSWQTYIMIAIYFIILLVIGYYGYKQATGNLSEYMLGGRNIGPYITALSAGASDMSGWMIMGLPGSVYSTGLSAIWITIGLTIGAYVNYLVVAPRLRVYTEVAGDAITLPDFFKNRLNDKHNIIKIISGLIIVIFFTLYTHSGFVSGGKLFESAFGLNYHWGLISVAIIVILYTFFGGYLAVSITDFFQGVIMLIAMVMVPIVALMQLSGWDTFHQVAEMKPTNMDLFRGTTFLGMISLFAWGLGYFGQPHIIVRFMSIKSHKLLPKARRLGISWMIVGLLGAVGVGLTGIAFISKNHIKMDDPETLFIIMSQVLFHPLVGGFLLAAILAAIMSTISSQLLVTSSSLTEDFYKLIRGEEHAQSHQKEFVLVGRLSVLAVAIVALAIAWSPNDTILNLVGNAWAGFGAAFSPLVLFSLYWKKLTRAGAISGMIAGALVVIIWIVWVKPLANINELFGMYEIIPGFISSVIVTYLVSIFTYKSNYSIEQQLNQVKTIVREK persistent 512 putP sodium/proline symporter PutP GO:0005298,GO:0006814,GO:0015824,GO:0016020,GO:0031402 WP_049379620.1 UPI00066EF817 UniRef100_UPI00066EF817,UniRef50_Q2FWY7,UniRef90_A0A6N0I4J0 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 65556 65858 . + . GCA_005502385.1_02210_gene GCA_005502385.1_02210 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTKVTREEVEHIAHLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLRDDKAIEGIPQELALKNAKETEDGQFKVPAIMNEEDA . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 65556 65858 . + . GCA_005502385.1_02210_mRNA GCA_005502385.1_02210 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTKVTREEVEHIAHLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLRDDKAIEGIPQELALKNAKETEDGQFKVPAIMNEEDA . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 65556 65858 . + 0 GCA_005502385.1_02210 GCA_005502385.1_02210_gene,GCA_005502385.1_02210_mRNA GCA_005502385.1_02210 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTKVTREEVEHIAHLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLRDDKAIEGIPQELALKNAKETEDGQFKVPAIMNEEDA persistent 100 gatC Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC 6.3.5.- GO:0005524,GO:0006412,GO:0006424,GO:0006450,GO:0030956,GO:0050566,GO:0050567,GO:0070681 COG0721,J WP_002450027.1 UPI00019FB3B6 UniRef100_A0A1L8Y4J6,UniRef50_Q2FWY8,UniRef90_Q5HN33 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 65860 67317 . + . GCA_005502385.1_02211_gene GCA_005502385.1_02211 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MSIRYESVETLSEMIKSKKIKPSEVVKDIYDAIEETDPTIKSFLALDKENAIKKAKELDELQAKDQFEGKLFGIPMGIKDNIITKDVETTCASKMLEGFVPIYESTVMNKLHQENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHQAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNAMVLEAIAGADKNDSTSAPVEDVDFTSEIGKDIKGLKIALPKEYLGEGVSEEVKTSVKQAVETLKSLGAEVDEVSLPNTKYGIPSYYVIASSEASANLARFDGIRYGYHSKEAQTLEELYKMSRSEGFGDEVKRRIFLGTFALSSGYYDAFYNKSQKVRTLIKNDFDKVFENYDVVVGPTAPTTAFNLGEEIDDPLTMYANDLLTTPVNLAGLPGISVPCGQSNGRPIGLQFIGKPFDEKTLYRVAYQYETQFNLHDAYEKL . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 65860 67317 . + . GCA_005502385.1_02211_mRNA GCA_005502385.1_02211 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MSIRYESVETLSEMIKSKKIKPSEVVKDIYDAIEETDPTIKSFLALDKENAIKKAKELDELQAKDQFEGKLFGIPMGIKDNIITKDVETTCASKMLEGFVPIYESTVMNKLHQENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHQAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNAMVLEAIAGADKNDSTSAPVEDVDFTSEIGKDIKGLKIALPKEYLGEGVSEEVKTSVKQAVETLKSLGAEVDEVSLPNTKYGIPSYYVIASSEASANLARFDGIRYGYHSKEAQTLEELYKMSRSEGFGDEVKRRIFLGTFALSSGYYDAFYNKSQKVRTLIKNDFDKVFENYDVVVGPTAPTTAFNLGEEIDDPLTMYANDLLTTPVNLAGLPGISVPCGQSNGRPIGLQFIGKPFDEKTLYRVAYQYETQFNLHDAYEKL . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 65860 67317 . + 0 GCA_005502385.1_02211 GCA_005502385.1_02211_gene,GCA_005502385.1_02211_mRNA GCA_005502385.1_02211 Glutamyl-tRNA(Gln) amidotransferase subunit A GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MSIRYESVETLSEMIKSKKIKPSEVVKDIYDAIEETDPTIKSFLALDKENAIKKAKELDELQAKDQFEGKLFGIPMGIKDNIITKDVETTCASKMLEGFVPIYESTVMNKLHQENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHQAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNAMVLEAIAGADKNDSTSAPVEDVDFTSEIGKDIKGLKIALPKEYLGEGVSEEVKTSVKQAVETLKSLGAEVDEVSLPNTKYGIPSYYVIASSEASANLARFDGIRYGYHSKEAQTLEELYKMSRSEGFGDEVKRRIFLGTFALSSGYYDAFYNKSQKVRTLIKNDFDKVFENYDVVVGPTAPTTAFNLGEEIDDPLTMYANDLLTTPVNLAGLPGISVPCGQSNGRPIGLQFIGKPFDEKTLYRVAYQYETQFNLHDAYEKL persistent 485 gatA Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA 6.3.5.7 GO:0005524,GO:0006412,GO:0006424,GO:0030956,GO:0050567 COG0154,J WP_048761656.1 UPI000660A7B6 UniRef100_UPI000660A7B6,UniRef50_O06491,UniRef90_P63488 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 67330 68757 . + . GCA_005502385.1_02212_gene GCA_005502385.1_02212 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MHFETVIGLEVHVELKTDSKMFSPSPAHFGAEPNSNTNVIDLAYPGVLPVVNRRAVDWAMRASMALNMDIATNSKFDRKNYFYPDNPKAYQISQFDQPIGENGYIDIEVDGETKRIGITRLHMEEDAGKSTHKDGYSLVDLNRQGTPLIEIVSEPDIRSPKEAYAYLEKLRSIIQYTGVSDCKMEEGSLRCDANISLRPYGQKEFGTKTELKNLNSFNYVRKGLEYEEKRQEEELLNGGTIGQETRRFDESTGKTILMRVKEGSDDYRYFPEPDIVPLYVDDEWKERVRQTIPELPDERKAKYVNELGLPEYDAHVLTLTKEMSDFFEGAIEHGADVKLTSNWLMGGVNEYLNKNQVDLEDTKLTPENLAGMIKLIEDGTMSSKIAKKVFPELAENGGDAKQIMEDKGLVQISDEATLLKFVNEALDNNPQSVEDYKNGKGKAMGFLVGQIMKASKGQANPQKVNQLLKQELDKR . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 67330 68757 . + . GCA_005502385.1_02212_mRNA GCA_005502385.1_02212 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MHFETVIGLEVHVELKTDSKMFSPSPAHFGAEPNSNTNVIDLAYPGVLPVVNRRAVDWAMRASMALNMDIATNSKFDRKNYFYPDNPKAYQISQFDQPIGENGYIDIEVDGETKRIGITRLHMEEDAGKSTHKDGYSLVDLNRQGTPLIEIVSEPDIRSPKEAYAYLEKLRSIIQYTGVSDCKMEEGSLRCDANISLRPYGQKEFGTKTELKNLNSFNYVRKGLEYEEKRQEEELLNGGTIGQETRRFDESTGKTILMRVKEGSDDYRYFPEPDIVPLYVDDEWKERVRQTIPELPDERKAKYVNELGLPEYDAHVLTLTKEMSDFFEGAIEHGADVKLTSNWLMGGVNEYLNKNQVDLEDTKLTPENLAGMIKLIEDGTMSSKIAKKVFPELAENGGDAKQIMEDKGLVQISDEATLLKFVNEALDNNPQSVEDYKNGKGKAMGFLVGQIMKASKGQANPQKVNQLLKQELDKR . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 67330 68757 . + 0 GCA_005502385.1_02212 GCA_005502385.1_02212_gene,GCA_005502385.1_02212_mRNA GCA_005502385.1_02212 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MHFETVIGLEVHVELKTDSKMFSPSPAHFGAEPNSNTNVIDLAYPGVLPVVNRRAVDWAMRASMALNMDIATNSKFDRKNYFYPDNPKAYQISQFDQPIGENGYIDIEVDGETKRIGITRLHMEEDAGKSTHKDGYSLVDLNRQGTPLIEIVSEPDIRSPKEAYAYLEKLRSIIQYTGVSDCKMEEGSLRCDANISLRPYGQKEFGTKTELKNLNSFNYVRKGLEYEEKRQEEELLNGGTIGQETRRFDESTGKTILMRVKEGSDDYRYFPEPDIVPLYVDDEWKERVRQTIPELPDERKAKYVNELGLPEYDAHVLTLTKEMSDFFEGAIEHGADVKLTSNWLMGGVNEYLNKNQVDLEDTKLTPENLAGMIKLIEDGTMSSKIAKKVFPELAENGGDAKQIMEDKGLVQISDEATLLKFVNEALDNNPQSVEDYKNGKGKAMGFLVGQIMKASKGQANPQKVNQLLKQELDKR persistent 475 gatB Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB 6.3.5.- GO:0005524,GO:0006412,GO:0016884,GO:0050566,GO:0050567,GO:0070681 COG0064,J WP_017175240.1 UPI0002FCE059 UniRef100_A0A3S7GXF2,UniRef50_Q45486,UniRef90_Q45486 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 69071 69991 . + . GCA_005502385.1_02213_gene GCA_005502385.1_02213 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MRKRARIIYNPTSGKELFKRTLPDVLIKLERAGYETSAYATEREGDATLEAERALEQNYDIIIAAGGDGTLNEVVNGIAEQPNRPKLGIIPMGTVNDFGRALHLPNDIMGAVDVIIKGHTTKVDIGKMNNRYFINLAAGGKLTQVSYETPSRLKSIVGPFAYYIKGFEMLPQMKAVDLRIEYDNEVFQGEALLFLLGLTNSMAGFEKLVPDAKLDDGYYTLIIVEKANLAELGHIMTLASRGEHTKHPKVIYKKAKSINISSFTDMQLNVDGEYGGKLPANFLNLKQHIEVCTPKDIYNDELSENH . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 69071 69991 . + . GCA_005502385.1_02213_mRNA GCA_005502385.1_02213 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MRKRARIIYNPTSGKELFKRTLPDVLIKLERAGYETSAYATEREGDATLEAERALEQNYDIIIAAGGDGTLNEVVNGIAEQPNRPKLGIIPMGTVNDFGRALHLPNDIMGAVDVIIKGHTTKVDIGKMNNRYFINLAAGGKLTQVSYETPSRLKSIVGPFAYYIKGFEMLPQMKAVDLRIEYDNEVFQGEALLFLLGLTNSMAGFEKLVPDAKLDDGYYTLIIVEKANLAELGHIMTLASRGEHTKHPKVIYKKAKSINISSFTDMQLNVDGEYGGKLPANFLNLKQHIEVCTPKDIYNDELSENH . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 69071 69991 . + 0 GCA_005502385.1_02213 GCA_005502385.1_02213_gene,GCA_005502385.1_02213_mRNA GCA_005502385.1_02213 Diacylglycerol kinase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MRKRARIIYNPTSGKELFKRTLPDVLIKLERAGYETSAYATEREGDATLEAERALEQNYDIIIAAGGDGTLNEVVNGIAEQPNRPKLGIIPMGTVNDFGRALHLPNDIMGAVDVIIKGHTTKVDIGKMNNRYFINLAAGGKLTQVSYETPSRLKSIVGPFAYYIKGFEMLPQMKAVDLRIEYDNEVFQGEALLFLLGLTNSMAGFEKLVPDAKLDDGYYTLIIVEKANLAELGHIMTLASRGEHTKHPKVIYKKAKSINISSFTDMQLNVDGEYGGKLPANFLNLKQHIEVCTPKDIYNDELSENH persistent 306 diacylglycerol kinase 2.7.1.107 GO:0003951 WP_048761651.1 UPI000660CB55 UniRef100_UPI000660CB55,UniRef50_Q6GFF9,UniRef90_A0A853V6R1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 70123 71484 . + . GCA_005502385.1_02214_gene GCA_005502385.1_02214 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MINKNDVIKGKVIDLTHEGHGVIKLDRYPIFVPNVLIDEEVEFKVIKVKKNFAIGKLLKVLKQSEQRVTPPCIYYEKCGGCQLQHMSYESQLKMKKQQVVNLFHKKAKLEETVIHDTIGMNHPWRYRNKSQLPVGKDKNNKTIMGYYRQRSHDIIDMDSCLIQDEKQQELMNDIKQWLNELNVSIYNEKNKKGLLRHVVIRTSHYTNEVMIIFVTNGSKFKEAETLVHRLTEVYPDITSIKQNINNSHSNVIMGKQSMTLYGKDKITDKLSETIFEISDQSFYQINSVQTEKLYQKAIDYAQLSGNEIVLDTYCGIGTIGLYMAPVAKHVYGVEIVPSAIQDAKQNALINHFDNTTFECGKAEEVIIEWKQKGIEPDVIMVDPPRKGCDQVFIETLLELAPKRIIYISCNPSTQQRDAQLLANLYHLKEITPVDMFPHTTHIETVALFERKTV . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 70123 71484 . + . GCA_005502385.1_02214_mRNA GCA_005502385.1_02214 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MINKNDVIKGKVIDLTHEGHGVIKLDRYPIFVPNVLIDEEVEFKVIKVKKNFAIGKLLKVLKQSEQRVTPPCIYYEKCGGCQLQHMSYESQLKMKKQQVVNLFHKKAKLEETVIHDTIGMNHPWRYRNKSQLPVGKDKNNKTIMGYYRQRSHDIIDMDSCLIQDEKQQELMNDIKQWLNELNVSIYNEKNKKGLLRHVVIRTSHYTNEVMIIFVTNGSKFKEAETLVHRLTEVYPDITSIKQNINNSHSNVIMGKQSMTLYGKDKITDKLSETIFEISDQSFYQINSVQTEKLYQKAIDYAQLSGNEIVLDTYCGIGTIGLYMAPVAKHVYGVEIVPSAIQDAKQNALINHFDNTTFECGKAEEVIIEWKQKGIEPDVIMVDPPRKGCDQVFIETLLELAPKRIIYISCNPSTQQRDAQLLANLYHLKEITPVDMFPHTTHIETVALFERKTV . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 70123 71484 . + 0 GCA_005502385.1_02214 GCA_005502385.1_02214_gene,GCA_005502385.1_02214_mRNA GCA_005502385.1_02214 23S rRNA (uracil-C(5))-methyltransferase RlmCD GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MINKNDVIKGKVIDLTHEGHGVIKLDRYPIFVPNVLIDEEVEFKVIKVKKNFAIGKLLKVLKQSEQRVTPPCIYYEKCGGCQLQHMSYESQLKMKKQQVVNLFHKKAKLEETVIHDTIGMNHPWRYRNKSQLPVGKDKNNKTIMGYYRQRSHDIIDMDSCLIQDEKQQELMNDIKQWLNELNVSIYNEKNKKGLLRHVVIRTSHYTNEVMIIFVTNGSKFKEAETLVHRLTEVYPDITSIKQNINNSHSNVIMGKQSMTLYGKDKITDKLSETIFEISDQSFYQINSVQTEKLYQKAIDYAQLSGNEIVLDTYCGIGTIGLYMAPVAKHVYGVEIVPSAIQDAKQNALINHFDNTTFECGKAEEVIIEWKQKGIEPDVIMVDPPRKGCDQVFIETLLELAPKRIIYISCNPSTQQRDAQLLANLYHLKEITPVDMFPHTTHIETVALFERKTV persistent 453 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 2.1.1.190 GO:0008649 WP_049382588.1 UPI00066DD082 UniRef100_UPI00066DD082,UniRef50_Q8CRU6,UniRef90_A0A3S7GXZ3 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 71621 72169 . + . GCA_005502385.1_02215_gene GCA_005502385.1_02215 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MHKIDLSHNRIKISKLLTIQVVMMLFAILFTYKWAINYVDIIEQRFLTNVIYGILGFIGLLIIHELIHKCLFFIFSKGQKPQLKYKNGILLIYLSSKYFNKWQFCAVMLAPLVIITIGLMISFYNFAYSSIIFISSIHIGYCLIDIYLAGITIINKFKYIRSTDEGIFMYHHLPISINNDYE . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 71621 72169 . + . GCA_005502385.1_02215_mRNA GCA_005502385.1_02215 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MHKIDLSHNRIKISKLLTIQVVMMLFAILFTYKWAINYVDIIEQRFLTNVIYGILGFIGLLIIHELIHKCLFFIFSKGQKPQLKYKNGILLIYLSSKYFNKWQFCAVMLAPLVIITIGLMISFYNFAYSSIIFISSIHIGYCLIDIYLAGITIINKFKYIRSTDEGIFMYHHLPISINNDYE . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 71621 72169 . + 0 GCA_005502385.1_02215 GCA_005502385.1_02215_gene,GCA_005502385.1_02215_mRNA GCA_005502385.1_02215 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MHKIDLSHNRIKISKLLTIQVVMMLFAILFTYKWAINYVDIIEQRFLTNVIYGILGFIGLLIIHELIHKCLFFIFSKGQKPQLKYKNGILLIYLSSKYFNKWQFCAVMLAPLVIITIGLMISFYNFAYSSIIFISSIHIGYCLIDIYLAGITIINKFKYIRSTDEGIFMYHHLPISINNDYE persistent 182 DUF3267 domain-containing protein WP_061544443.1 UPI000778D647 UniRef100_UPI000778D647,UniRef50_A0A2A1K930,UniRef90_A0A974QMY8 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 72278 73348 . + . GCA_005502385.1_02216_gene GCA_005502385.1_02216 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTERRIVHIDMDCFYAQVEMRDNPKLQGKPVIVGGKASHRGVVSTASYEARKYGVHSAMPMSQAHKLCPNGYYVRARFDVYREVSSKIMEIFKQYTEIVEPLALDEAYLDITHLVKPHRSASKIASNIRKDIFNKTGLTSSAGVSYNKYLAKLASGMNKPNGMMVIHYQNVHDILMNLDIGDFPGVGKASKKIMHEHDIYTGKDLYSKSEFELIRWFGKKGRGLYQKARGIDDSEVKVSRIRKSVGTERTFSTDINDDKEILQKIWELSRKTSERLTQLQKSGTTVTVKIKTHRFETYSKQRSLREAVSKDIDIYNIAYDLYHELKDPDVPIRLIGVTVGHLEQSTYQNMTIYDFI . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 72278 73348 . + . GCA_005502385.1_02216_mRNA GCA_005502385.1_02216 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTERRIVHIDMDCFYAQVEMRDNPKLQGKPVIVGGKASHRGVVSTASYEARKYGVHSAMPMSQAHKLCPNGYYVRARFDVYREVSSKIMEIFKQYTEIVEPLALDEAYLDITHLVKPHRSASKIASNIRKDIFNKTGLTSSAGVSYNKYLAKLASGMNKPNGMMVIHYQNVHDILMNLDIGDFPGVGKASKKIMHEHDIYTGKDLYSKSEFELIRWFGKKGRGLYQKARGIDDSEVKVSRIRKSVGTERTFSTDINDDKEILQKIWELSRKTSERLTQLQKSGTTVTVKIKTHRFETYSKQRSLREAVSKDIDIYNIAYDLYHELKDPDVPIRLIGVTVGHLEQSTYQNMTIYDFI . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 72278 73348 . + 0 GCA_005502385.1_02216 GCA_005502385.1_02216_gene,GCA_005502385.1_02216_mRNA GCA_005502385.1_02216 DNA polymerase IV GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTERRIVHIDMDCFYAQVEMRDNPKLQGKPVIVGGKASHRGVVSTASYEARKYGVHSAMPMSQAHKLCPNGYYVRARFDVYREVSSKIMEIFKQYTEIVEPLALDEAYLDITHLVKPHRSASKIASNIRKDIFNKTGLTSSAGVSYNKYLAKLASGMNKPNGMMVIHYQNVHDILMNLDIGDFPGVGKASKKIMHEHDIYTGKDLYSKSEFELIRWFGKKGRGLYQKARGIDDSEVKVSRIRKSVGTERTFSTDINDDKEILQKIWELSRKTSERLTQLQKSGTTVTVKIKTHRFETYSKQRSLREAVSKDIDIYNIAYDLYHELKDPDVPIRLIGVTVGHLEQSTYQNMTIYDFI persistent 356 dinB DNA polymerase IV 2.7.7.7 GO:0003684,GO:0003887,GO:0006281 WP_049382581.1 UPI00066B1726 UniRef100_UPI00066B1726,UniRef50_Q49YT9,UniRef90_A0A6N0I4R1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 73376 73933 . - . GCA_005502385.1_02217_gene GCA_005502385.1_02217 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MLKNSFIALDFETANKKRTSICSVGMVKVVDNEIVETFYTLVNPHDYFSETNIHVHGIHPEDVKGAPDFKEVFPYMLQFINQLPVVAHNAAFDMGVLHQSLKHLNIAVPSLTYFCSYQLARRTIKAYRYGLKHLMNHYNLNFHGHHDALNDAKACAMITYRLLKHYDSLQSVLQFHGKNLKDRNR . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 73376 73933 . - . GCA_005502385.1_02217_mRNA GCA_005502385.1_02217 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MLKNSFIALDFETANKKRTSICSVGMVKVVDNEIVETFYTLVNPHDYFSETNIHVHGIHPEDVKGAPDFKEVFPYMLQFINQLPVVAHNAAFDMGVLHQSLKHLNIAVPSLTYFCSYQLARRTIKAYRYGLKHLMNHYNLNFHGHHDALNDAKACAMITYRLLKHYDSLQSVLQFHGKNLKDRNR . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 73376 73933 . - 0 GCA_005502385.1_02217 GCA_005502385.1_02217_gene,GCA_005502385.1_02217_mRNA GCA_005502385.1_02217 Putative bifunctional exonuclease/endonuclease protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MLKNSFIALDFETANKKRTSICSVGMVKVVDNEIVETFYTLVNPHDYFSETNIHVHGIHPEDVKGAPDFKEVFPYMLQFINQLPVVAHNAAFDMGVLHQSLKHLNIAVPSLTYFCSYQLARRTIKAYRYGLKHLMNHYNLNFHGHHDALNDAKACAMITYRLLKHYDSLQSVLQFHGKNLKDRNR persistent 185 DNA polymerase III subunit epsilon WP_017175235.1 UPI0002E1DAE7 UniRef100_A0A4Q9WRR8,UniRef50_B9DMT2,UniRef90_A0A974QMS6 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 74173 75483 . + . GCA_005502385.1_02218_gene GCA_005502385.1_02218 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MRQWTATHLAKLARKISIAAGKKGTDLPGQIARKVDQNILRKLASQVDDIVFISGTNGKTTTSNLIGHTLKANNIEIIHNNEGANMAAGITSAFIMKNVKDIKVAVIEIDEGSIPKVLKEVTPSMMVFTNFFRDQMDRFGEIDIMVNNIAKSISNKGIKLILNADDPFVSRLKIASDTIVYYGMKAHAHEFEQSTMNESKYCPNCGRLLTYDYTHYNQLGHYHCECGFKRETPKYEVSQFEVQPFIDMDVNDAHFEMKIAGDFNAFNALAAYSVLKELGLNNDAIRKGFKTYTSNNGRMQYFKRGQKEAMINLAKNPAGMNVSLSVGDQLKEKKVYVISLNDNAADGRDTSWIYDTDFEKLRNQNIEKIIVTGTRAEELQLRLKLAEVDVPIILEKDIYKATALTMNYAGFTVAIPNYTSLSPMLEQLNRSFAGGR . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 74173 75483 . + . GCA_005502385.1_02218_mRNA GCA_005502385.1_02218 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MRQWTATHLAKLARKISIAAGKKGTDLPGQIARKVDQNILRKLASQVDDIVFISGTNGKTTTSNLIGHTLKANNIEIIHNNEGANMAAGITSAFIMKNVKDIKVAVIEIDEGSIPKVLKEVTPSMMVFTNFFRDQMDRFGEIDIMVNNIAKSISNKGIKLILNADDPFVSRLKIASDTIVYYGMKAHAHEFEQSTMNESKYCPNCGRLLTYDYTHYNQLGHYHCECGFKRETPKYEVSQFEVQPFIDMDVNDAHFEMKIAGDFNAFNALAAYSVLKELGLNNDAIRKGFKTYTSNNGRMQYFKRGQKEAMINLAKNPAGMNVSLSVGDQLKEKKVYVISLNDNAADGRDTSWIYDTDFEKLRNQNIEKIIVTGTRAEELQLRLKLAEVDVPIILEKDIYKATALTMNYAGFTVAIPNYTSLSPMLEQLNRSFAGGR . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 74173 75483 . + 0 GCA_005502385.1_02218 GCA_005502385.1_02218_gene,GCA_005502385.1_02218_mRNA GCA_005502385.1_02218 Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit MurT GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MRQWTATHLAKLARKISIAAGKKGTDLPGQIARKVDQNILRKLASQVDDIVFISGTNGKTTTSNLIGHTLKANNIEIIHNNEGANMAAGITSAFIMKNVKDIKVAVIEIDEGSIPKVLKEVTPSMMVFTNFFRDQMDRFGEIDIMVNNIAKSISNKGIKLILNADDPFVSRLKIASDTIVYYGMKAHAHEFEQSTMNESKYCPNCGRLLTYDYTHYNQLGHYHCECGFKRETPKYEVSQFEVQPFIDMDVNDAHFEMKIAGDFNAFNALAAYSVLKELGLNNDAIRKGFKTYTSNNGRMQYFKRGQKEAMINLAKNPAGMNVSLSVGDQLKEKKVYVISLNDNAADGRDTSWIYDTDFEKLRNQNIEKIIVTGTRAEELQLRLKLAEVDVPIILEKDIYKATALTMNYAGFTVAIPNYTSLSPMLEQLNRSFAGGR persistent 436 murT Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit MurT 6.3.5.13 WP_049382582.1 UPI00066AD368 UniRef100_UPI00066AD368,UniRef50_A0A0H3JUU7,UniRef90_A0A4Q9WPN8 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 75486 76205 . + . GCA_005502385.1_02219_gene GCA_005502385.1_02219 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MYELTVFHFMSDKLNLYSDIGNIIALKQRAKKRNINLKVIEINETEGVTLENCDIFFIGGGSDREQSIATKELSKIKTILKDAIEDGMPGLTICGGYQFLGTKYITPDGTELEGLGILDFYTKSKTDRLTGDIVIKSDTFGTIVGFENHGGRTYHNFDTLGHVVTGYGNNDDDKKEGIHYKNLLGTYLHGPILPKNHELTDYLLEKACERKGIPFTPKQLDNTEEEAAKYVIIERSEKE . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 75486 76205 . + . GCA_005502385.1_02219_mRNA GCA_005502385.1_02219 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MYELTVFHFMSDKLNLYSDIGNIIALKQRAKKRNINLKVIEINETEGVTLENCDIFFIGGGSDREQSIATKELSKIKTILKDAIEDGMPGLTICGGYQFLGTKYITPDGTELEGLGILDFYTKSKTDRLTGDIVIKSDTFGTIVGFENHGGRTYHNFDTLGHVVTGYGNNDDDKKEGIHYKNLLGTYLHGPILPKNHELTDYLLEKACERKGIPFTPKQLDNTEEEAAKYVIIERSEKE . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 75486 76205 . + 0 GCA_005502385.1_02219 GCA_005502385.1_02219_gene,GCA_005502385.1_02219_mRNA GCA_005502385.1_02219 Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MYELTVFHFMSDKLNLYSDIGNIIALKQRAKKRNINLKVIEINETEGVTLENCDIFFIGGGSDREQSIATKELSKIKTILKDAIEDGMPGLTICGGYQFLGTKYITPDGTELEGLGILDFYTKSKTDRLTGDIVIKSDTFGTIVGFENHGGRTYHNFDTLGHVVTGYGNNDDDKKEGIHYKNLLGTYLHGPILPKNHELTDYLLEKACERKGIPFTPKQLDNTEEEAAKYVIIERSEKE persistent 239 gatD Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD 6.3.5.13 COG3442,R WP_017175233.1 UPI0002D6A593 UniRef100_A0A3S7GWW0,UniRef50_A0A0H2WZ38,UniRef90_A0A2A1KAP8 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 76251 77240 . - . GCA_005502385.1_02220_gene GCA_005502385.1_02220 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNQWYKHIIGARTIKTGLATFLTTLFCLLLNLTPIFAILTAIVSIEPTAKASLRKGYRRLPATVIGALFAVIFTYIFGDQSPFTYTFSAIFTILACTKLNLQVGTTVAVLTSVAMIPGIHEAYLFNFFSRLLTALIGLVTAGLVNFFVLPPKYYHQIEENLIHSENNLYELFASRCHELLLGKFDSDNSNTSLATLSDMNKKTDTLMNYQRDELRYHKNNEDKWKQLKDMSNRAYIDRLLATHLSNIIYLPKNVNICFTTEEKMAIIKISNSINNIPLDGVFKRESKSISTLKSSVKILEEFDKNQIKSHVIYEILLIYNLLDNRFVKA . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 76251 77240 . - . GCA_005502385.1_02220_mRNA GCA_005502385.1_02220 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNQWYKHIIGARTIKTGLATFLTTLFCLLLNLTPIFAILTAIVSIEPTAKASLRKGYRRLPATVIGALFAVIFTYIFGDQSPFTYTFSAIFTILACTKLNLQVGTTVAVLTSVAMIPGIHEAYLFNFFSRLLTALIGLVTAGLVNFFVLPPKYYHQIEENLIHSENNLYELFASRCHELLLGKFDSDNSNTSLATLSDMNKKTDTLMNYQRDELRYHKNNEDKWKQLKDMSNRAYIDRLLATHLSNIIYLPKNVNICFTTEEKMAIIKISNSINNIPLDGVFKRESKSISTLKSSVKILEEFDKNQIKSHVIYEILLIYNLLDNRFVKA . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 76251 77240 . - 0 GCA_005502385.1_02220 GCA_005502385.1_02220_gene,GCA_005502385.1_02220_mRNA GCA_005502385.1_02220 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNQWYKHIIGARTIKTGLATFLTTLFCLLLNLTPIFAILTAIVSIEPTAKASLRKGYRRLPATVIGALFAVIFTYIFGDQSPFTYTFSAIFTILACTKLNLQVGTTVAVLTSVAMIPGIHEAYLFNFFSRLLTALIGLVTAGLVNFFVLPPKYYHQIEENLIHSENNLYELFASRCHELLLGKFDSDNSNTSLATLSDMNKKTDTLMNYQRDELRYHKNNEDKWKQLKDMSNRAYIDRLLATHLSNIIYLPKNVNICFTTEEKMAIIKISNSINNIPLDGVFKRESKSISTLKSSVKILEEFDKNQIKSHVIYEILLIYNLLDNRFVKA persistent 329 Aromatic acid exporter family protein WP_017175232.1 UPI0002F7DF24 UniRef100_A0A3S7GX12,UniRef50_Q2FX03,UniRef90_A0AAE5MYG1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 77414 78166 . + . GCA_005502385.1_02221_gene GCA_005502385.1_02221 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MIVKTDEELQALKEIGYICAKVRDTMQEATKPGITTKELDNIAKELFEEHGAISAPIHDEKFPGQTCISVNEEVAHGIPGKRIIREGDLVNIDVSALKNGYYADTGISFVVGEADNPLKQKVCDVALEAFDAAMAKVKPGTKLSNIGKAVHATARKNDLTVIKNLTGHGVGQSLHEAPSHVMNYYDPKDKTLLKEGVVIAVEPFISSKATFVTEGKNDWAFETKDKSFVAQIEHTVIVTKDGPMLTTKID . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 77414 78166 . + . GCA_005502385.1_02221_mRNA GCA_005502385.1_02221 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MIVKTDEELQALKEIGYICAKVRDTMQEATKPGITTKELDNIAKELFEEHGAISAPIHDEKFPGQTCISVNEEVAHGIPGKRIIREGDLVNIDVSALKNGYYADTGISFVVGEADNPLKQKVCDVALEAFDAAMAKVKPGTKLSNIGKAVHATARKNDLTVIKNLTGHGVGQSLHEAPSHVMNYYDPKDKTLLKEGVVIAVEPFISSKATFVTEGKNDWAFETKDKSFVAQIEHTVIVTKDGPMLTTKID . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 77414 78166 . + 0 GCA_005502385.1_02221 GCA_005502385.1_02221_gene,GCA_005502385.1_02221_mRNA GCA_005502385.1_02221 Methionine aminopeptidase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MIVKTDEELQALKEIGYICAKVRDTMQEATKPGITTKELDNIAKELFEEHGAISAPIHDEKFPGQTCISVNEEVAHGIPGKRIIREGDLVNIDVSALKNGYYADTGISFVVGEADNPLKQKVCDVALEAFDAAMAKVKPGTKLSNIGKAVHATARKNDLTVIKNLTGHGVGQSLHEAPSHVMNYYDPKDKTLLKEGVVIAVEPFISSKATFVTEGKNDWAFETKDKSFVAQIEHTVIVTKDGPMLTTKID persistent 250 map type I methionyl aminopeptidase 3.4.11.18 GO:0004239,GO:0006508,GO:0046872,GO:0070006 COG0024,J WP_049382583.1 UPI00066A84F0 UniRef100_UPI00066A84F0,UniRef50_Q8CRU9,UniRef90_Q8CRU9 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 78844 79230 . + . GCA_005502385.1_02222_gene GCA_005502385.1_02222 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNYLDLYLQHFLKIIIKNNINDYRSLLDDKLQSMERYIKYLKNKKEKINTLIDSLSATLENKYIDMINMYNIKNAQEVHNNEIDLLKQRLGKFEAYYAKIEANIHRCTKERIAAEEQYSIIEQMSYVA . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 78844 79230 . + . GCA_005502385.1_02222_mRNA GCA_005502385.1_02222 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNYLDLYLQHFLKIIIKNNINDYRSLLDDKLQSMERYIKYLKNKKEKINTLIDSLSATLENKYIDMINMYNIKNAQEVHNNEIDLLKQRLGKFEAYYAKIEANIHRCTKERIAAEEQYSIIEQMSYVA . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 78844 79230 . + 0 GCA_005502385.1_02222 GCA_005502385.1_02222_gene,GCA_005502385.1_02222_mRNA GCA_005502385.1_02222 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNYLDLYLQHFLKIIIKNNINDYRSLLDDKLQSMERYIKYLKNKKEKINTLIDSLSATLENKYIDMINMYNIKNAQEVHNNEIDLLKQRLGKFEAYYAKIEANIHRCTKERIAAEEQYSIIEQMSYVA persistent 128 Staphylococcal protein WP_049415632.1 UPI00066E97DB UniRef100_UPI00066E97DB,UniRef50_A0A974KWH3,UniRef90_A0A974KWH3 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 79252 79953 . + . GCA_005502385.1_02223_gene GCA_005502385.1_02223 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTRKYISTELLIIFTALMIIANFYYIFFEKIGYLFILLLGCILIYVGYLYFHKVRGLLAFWIGALLIAFTLLSNKYTIIILFIFLVIIIIRYLVFKFKPLKIVASEEEVTSPQFIKQRWLGEQRTPVYVYKWEDVQIQHGVGDIHIDMTKAANIKENNTIVVRHILGKVQLIVPVNYNINLHMASFYGTAYINGEAYKVENNHVQVEEKPKEENYSVNIYVSTFIGDVEVIYR . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 79252 79953 . + . GCA_005502385.1_02223_mRNA GCA_005502385.1_02223 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTRKYISTELLIIFTALMIIANFYYIFFEKIGYLFILLLGCILIYVGYLYFHKVRGLLAFWIGALLIAFTLLSNKYTIIILFIFLVIIIIRYLVFKFKPLKIVASEEEVTSPQFIKQRWLGEQRTPVYVYKWEDVQIQHGVGDIHIDMTKAANIKENNTIVVRHILGKVQLIVPVNYNINLHMASFYGTAYINGEAYKVENNHVQVEEKPKEENYSVNIYVSTFIGDVEVIYR . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 79252 79953 . + 0 GCA_005502385.1_02223 GCA_005502385.1_02223_gene,GCA_005502385.1_02223_mRNA GCA_005502385.1_02223 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTRKYISTELLIIFTALMIIANFYYIFFEKIGYLFILLLGCILIYVGYLYFHKVRGLLAFWIGALLIAFTLLSNKYTIIILFIFLVIIIIRYLVFKFKPLKIVASEEEVTSPQFIKQRWLGEQRTPVYVYKWEDVQIQHGVGDIHIDMTKAANIKENNTIVVRHILGKVQLIVPVNYNINLHMASFYGTAYINGEAYKVENNHVQVEEKPKEENYSVNIYVSTFIGDVEVIYR persistent 233 liaF Transporter COG4758,T WP_017175229.1 UPI00030CC252 UniRef100_A0A4Q9WQF4,UniRef50_Q2FX07,UniRef90_A0A2A1KAF3 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 79950 80984 . + . GCA_005502385.1_02224_gene GCA_005502385.1_02224 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSVLAYKINQQNDWIKNQIEHAIEGETVGINDKNIELYNETIDIYQMLVPLNQELQKLRIKTQNLTNENYNMNDIKVKKIIEDERQRLARELHDSVSQQLFAASMMLSAIKETELAPPLNQQIPVLEKMIQESQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVIYDIQDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNHQDYLLLRIQDNGKGFNVDEKVEQSYGLKNMRERALEIGATFHIVSLPDSGTRIEVKAPLTKEEG . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 79950 80984 . + . GCA_005502385.1_02224_mRNA GCA_005502385.1_02224 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSVLAYKINQQNDWIKNQIEHAIEGETVGINDKNIELYNETIDIYQMLVPLNQELQKLRIKTQNLTNENYNMNDIKVKKIIEDERQRLARELHDSVSQQLFAASMMLSAIKETELAPPLNQQIPVLEKMIQESQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVIYDIQDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNHQDYLLLRIQDNGKGFNVDEKVEQSYGLKNMRERALEIGATFHIVSLPDSGTRIEVKAPLTKEEG . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 79950 80984 . + 0 GCA_005502385.1_02224 GCA_005502385.1_02224_gene,GCA_005502385.1_02224_mRNA GCA_005502385.1_02224 Sensor protein VraS GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSVLAYKINQQNDWIKNQIEHAIEGETVGINDKNIELYNETIDIYQMLVPLNQELQKLRIKTQNLTNENYNMNDIKVKKIIEDERQRLARELHDSVSQQLFAASMMLSAIKETELAPPLNQQIPVLEKMIQESQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVIYDIQDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNHQDYLLLRIQDNGKGFNVDEKVEQSYGLKNMRERALEIGATFHIVSLPDSGTRIEVKAPLTKEEG persistent 344 vraS Sensor protein VraS 2.7.13.3 GO:0000155,GO:0005524,GO:0005886,GO:0046983 COG4585,T WP_049415634.1 UPI00066DADFC UniRef100_A0A974KWJ9,UniRef50_Q7A2Q0,UniRef90_Q7A2Q0 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 80986 81615 . + . GCA_005502385.1_02225_gene GCA_005502385.1_02225 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGSSGKEAIEKAHTLNPDLILMDLLMNDMDGVEATTQIKKDLPHIKVVMLTSFIEDKEVYRALDAGVDSYILKTTSASDIAEAVRKTYRGESVFEPEVLVKMRNRMKKKAELYEMLTEREMEILLLISKGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLIQ . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 80986 81615 . + . GCA_005502385.1_02225_mRNA GCA_005502385.1_02225 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGSSGKEAIEKAHTLNPDLILMDLLMNDMDGVEATTQIKKDLPHIKVVMLTSFIEDKEVYRALDAGVDSYILKTTSASDIAEAVRKTYRGESVFEPEVLVKMRNRMKKKAELYEMLTEREMEILLLISKGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLIQ . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 80986 81615 . + 0 GCA_005502385.1_02225 GCA_005502385.1_02225_gene,GCA_005502385.1_02225_mRNA GCA_005502385.1_02225 Response regulator protein VraR GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGSSGKEAIEKAHTLNPDLILMDLLMNDMDGVEATTQIKKDLPHIKVVMLTSFIEDKEVYRALDAGVDSYILKTTSASDIAEAVRKTYRGESVFEPEVLVKMRNRMKKKAELYEMLTEREMEILLLISKGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLIQ persistent 209 vraR two-component system response regulator VraR GO:0000160,GO:0003677,GO:0005737,GO:0006355 COG2197,TK WP_049415635.1 UPI00066A53B4 UniRef100_UPI00066A53B4,UniRef50_Q7A2Q1,UniRef90_Q7A2Q1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 81695 82903 . - . GCA_005502385.1_02226_gene GCA_005502385.1_02226 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MSKKNQSNSKYLNSIKEKETENKEKIKVDRTYVEPQEFQSKKPKKDKQVFFVSRLNKPAKYTKNSNFLSYLIYRIGKDDASGLAAQMTYHFVLALFPMLIFLLTLLPLFQIDPQQIKDLVSQNAPAETADVVTKIFKDITSNSSGSLLSVGLILAIWSASNGMTAIMNSFNVAYDVEDARNPIVLKLLSILFTIVMAIVLAIALTLPTFGNFIKDHLFGPLGLDQQVAWIFDLVRILLPLIVIIILFLTLYSVAPNVKTKFKSVYPGAIFTSIVWLLGSFAFGWYLSNFGNYSKTYGSLAGIIILLLWIYITCFIIIIGAEINAIIHQRHVIKGFTPEEAALKHDDNNENHYNENTKYEYDSTASSKYEKNYDVDPTPNDKHSEQDSFVDKIKDKFDKDNNK . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 81695 82903 . - . GCA_005502385.1_02226_mRNA GCA_005502385.1_02226 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MSKKNQSNSKYLNSIKEKETENKEKIKVDRTYVEPQEFQSKKPKKDKQVFFVSRLNKPAKYTKNSNFLSYLIYRIGKDDASGLAAQMTYHFVLALFPMLIFLLTLLPLFQIDPQQIKDLVSQNAPAETADVVTKIFKDITSNSSGSLLSVGLILAIWSASNGMTAIMNSFNVAYDVEDARNPIVLKLLSILFTIVMAIVLAIALTLPTFGNFIKDHLFGPLGLDQQVAWIFDLVRILLPLIVIIILFLTLYSVAPNVKTKFKSVYPGAIFTSIVWLLGSFAFGWYLSNFGNYSKTYGSLAGIIILLLWIYITCFIIIIGAEINAIIHQRHVIKGFTPEEAALKHDDNNENHYNENTKYEYDSTASSKYEKNYDVDPTPNDKHSEQDSFVDKIKDKFDKDNNK . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 81695 82903 . - 0 GCA_005502385.1_02226 GCA_005502385.1_02226_gene,GCA_005502385.1_02226_mRNA GCA_005502385.1_02226 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MSKKNQSNSKYLNSIKEKETENKEKIKVDRTYVEPQEFQSKKPKKDKQVFFVSRLNKPAKYTKNSNFLSYLIYRIGKDDASGLAAQMTYHFVLALFPMLIFLLTLLPLFQIDPQQIKDLVSQNAPAETADVVTKIFKDITSNSSGSLLSVGLILAIWSASNGMTAIMNSFNVAYDVEDARNPIVLKLLSILFTIVMAIVLAIALTLPTFGNFIKDHLFGPLGLDQQVAWIFDLVRILLPLIVIIILFLTLYSVAPNVKTKFKSVYPGAIFTSIVWLLGSFAFGWYLSNFGNYSKTYGSLAGIIILLLWIYITCFIIIIGAEINAIIHQRHVIKGFTPEEAALKHDDNNENHYNENTKYEYDSTASSKYEKNYDVDPTPNDKHSEQDSFVDKIKDKFDKDNNK persistent 402 brkB YihY/virulence factor BrkB family protein WP_049415638.1 UPI00066C3186 UniRef100_UPI00066C3186,UniRef50_A0A974KWQ8,UniRef90_A0A974KWQ8 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 82995 83276 . - . GCA_005502385.1_02227_gene GCA_005502385.1_02227 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MENKFVPGIIIGAIVGGAATLADKSTRNALVQSFKDIKEGNRSRKPSKITSIKNEVLYWKDTIEEIRRNNPELEKSIKDAKDTFVNRKNNRLS . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 82995 83276 . - . GCA_005502385.1_02227_mRNA GCA_005502385.1_02227 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MENKFVPGIIIGAIVGGAATLADKSTRNALVQSFKDIKEGNRSRKPSKITSIKNEVLYWKDTIEEIRRNNPELEKSIKDAKDTFVNRKNNRLS . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 82995 83276 . - 0 GCA_005502385.1_02227 GCA_005502385.1_02227_gene,GCA_005502385.1_02227_mRNA GCA_005502385.1_02227 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MENKFVPGIIIGAIVGGAATLADKSTRNALVQSFKDIKEGNRSRKPSKITSIKNEVLYWKDTIEEIRRNNPELEKSIKDAKDTFVNRKNNRLS persistent 93 ytxH YtxH domain-containing protein WP_002450075.1 UPI00019FB3A4 UniRef100_A0A1L8Y4G8,UniRef50_A0A2K3ZIL3,UniRef90_A0A1L8Y4G8 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 83282 83746 . - . GCA_005502385.1_02228_gene GCA_005502385.1_02228 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MVDVAFVCLGNICRSTMAEAIMRQRLKERGISDVIVHSRGTGRWNLGEPPHQGTQKILKQHHIPFDGIVSELFEPDDDFDYIIAMDQSNVDNIKSINPNLKGQLFKLLEFSNMEETDVPDPYYTNNFEGVYDMVQSSCDNLIDFIVKDTNLKEG . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 83282 83746 . - . GCA_005502385.1_02228_mRNA GCA_005502385.1_02228 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MVDVAFVCLGNICRSTMAEAIMRQRLKERGISDVIVHSRGTGRWNLGEPPHQGTQKILKQHHIPFDGIVSELFEPDDDFDYIIAMDQSNVDNIKSINPNLKGQLFKLLEFSNMEETDVPDPYYTNNFEGVYDMVQSSCDNLIDFIVKDTNLKEG . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 83282 83746 . - 0 GCA_005502385.1_02228 GCA_005502385.1_02228_gene,GCA_005502385.1_02228_mRNA GCA_005502385.1_02228 Low molecular weight protein-tyrosine-phosphatase PtpA GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MVDVAFVCLGNICRSTMAEAIMRQRLKERGISDVIVHSRGTGRWNLGEPPHQGTQKILKQHHIPFDGIVSELFEPDDDFDYIIAMDQSNVDNIKSINPNLKGQLFKLLEFSNMEETDVPDPYYTNNFEGVYDMVQSSCDNLIDFIVKDTNLKEG persistent 154 ptpA Low molecular weight protein-tyrosine-phosphatase PtpA WP_017175226.1 UPI00031675A5 UniRef100_A0A4Q9WPP6,UniRef50_Q2FX12,UniRef90_A0A6N0I4M8 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 83888 84094 . + . GCA_005502385.1_02229_gene GCA_005502385.1_02229 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MAQNNEQMIKNIRKKLNIVNQSLINPEKFKDTDTKDIKDIHDFVMSKDSFSPSEITAIADELGNLRHE . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 83888 84094 . + . GCA_005502385.1_02229_mRNA GCA_005502385.1_02229 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MAQNNEQMIKNIRKKLNIVNQSLINPEKFKDTDTKDIKDIHDFVMSKDSFSPSEITAIADELGNLRHE . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 83888 84094 . + 0 GCA_005502385.1_02229 GCA_005502385.1_02229_gene,GCA_005502385.1_02229_mRNA GCA_005502385.1_02229 hypothetical protein UPF0435 protein SA1696 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MAQNNEQMIKNIRKKLNIVNQSLINPEKFKDTDTKDIKDIHDFVMSKDSFSPSEITAIADELGNLRHE persistent 68 UPF0435 protein BUZ51_09350 WP_002450082.1 UPI00019FB3A2 UniRef100_A0A1L8Y4I3,UniRef50_Q8CRV4,UniRef90_A0A1L8Y4I3 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 84106 85353 . + . GCA_005502385.1_02230_gene GCA_005502385.1_02230 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MANQDYQDKLKQYAELLVKVGMNVQQNQPVFIRTSVETIELTRLIVEVAYKEGASDVRVVYTDPILERLKYENEAVDYFENHAVKAYDVEERMDYVRRGAANLALISGDPDLLNGIDAEKLKASQFNYGQAFKGYMEGSQKNAFPWVVAAFPSKAWAKRVYPNLPEEEAYSQFIDEVFEIVRVDGNDPITNWEQHVKSLSVHANKLQEKNYKALHYMSEGTDLTVGLPKGHIWEDATSYVNGNQQPFIANIPTEEVFTAPDRNHVDGYVTNKLPLSYNGNIIDGFTLTFKNGEIIDVKAEKGEEVLKDLISTDEGSKRLGEVALVPDDSPISNRNTIFYNTLFDENASCHLAIGSAYGFNIKGGTEMSTEEKIASGLNDSNVHVDFMIGSSDLTIYGILQDGSKELVFENGNWAQ . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 84106 85353 . + . GCA_005502385.1_02230_mRNA GCA_005502385.1_02230 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MANQDYQDKLKQYAELLVKVGMNVQQNQPVFIRTSVETIELTRLIVEVAYKEGASDVRVVYTDPILERLKYENEAVDYFENHAVKAYDVEERMDYVRRGAANLALISGDPDLLNGIDAEKLKASQFNYGQAFKGYMEGSQKNAFPWVVAAFPSKAWAKRVYPNLPEEEAYSQFIDEVFEIVRVDGNDPITNWEQHVKSLSVHANKLQEKNYKALHYMSEGTDLTVGLPKGHIWEDATSYVNGNQQPFIANIPTEEVFTAPDRNHVDGYVTNKLPLSYNGNIIDGFTLTFKNGEIIDVKAEKGEEVLKDLISTDEGSKRLGEVALVPDDSPISNRNTIFYNTLFDENASCHLAIGSAYGFNIKGGTEMSTEEKIASGLNDSNVHVDFMIGSSDLTIYGILQDGSKELVFENGNWAQ . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 84106 85353 . + 0 GCA_005502385.1_02230 GCA_005502385.1_02230_gene,GCA_005502385.1_02230_mRNA GCA_005502385.1_02230 Aminopeptidase PepS GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MANQDYQDKLKQYAELLVKVGMNVQQNQPVFIRTSVETIELTRLIVEVAYKEGASDVRVVYTDPILERLKYENEAVDYFENHAVKAYDVEERMDYVRRGAANLALISGDPDLLNGIDAEKLKASQFNYGQAFKGYMEGSQKNAFPWVVAAFPSKAWAKRVYPNLPEEEAYSQFIDEVFEIVRVDGNDPITNWEQHVKSLSVHANKLQEKNYKALHYMSEGTDLTVGLPKGHIWEDATSYVNGNQQPFIANIPTEEVFTAPDRNHVDGYVTNKLPLSYNGNIIDGFTLTFKNGEIIDVKAEKGEEVLKDLISTDEGSKRLGEVALVPDDSPISNRNTIFYNTLFDENASCHLAIGSAYGFNIKGGTEMSTEEKIASGLNDSNVHVDFMIGSSDLTIYGILQDGSKELVFENGNWAQ persistent 415 Aminopeptidase WP_061544624.1 UPI000778A404 UniRef100_UPI000778A404,UniRef50_A0A9N8IJS9,UniRef90_A0A4Q9WQX2 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 85386 85919 . + . GCA_005502385.1_02231_gene GCA_005502385.1_02231 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MSNSQVNKKSMSESKSIKTRQVFPQDTNHHHTMFGGSLMANIDEIAAITAMKHANAQVVTASTDSVDFLRPIKTGDITSYEAMVSYAGSSSMEICVQIIIEDVLNKERHLAALSFLTFVALDENGKPTRIPKVYPETKIEKWFYEGAPKRVQRRKERREESKKTIEFLSEAQHIEDI . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 85386 85919 . + . GCA_005502385.1_02231_mRNA GCA_005502385.1_02231 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MSNSQVNKKSMSESKSIKTRQVFPQDTNHHHTMFGGSLMANIDEIAAITAMKHANAQVVTASTDSVDFLRPIKTGDITSYEAMVSYAGSSSMEICVQIIIEDVLNKERHLAALSFLTFVALDENGKPTRIPKVYPETKIEKWFYEGAPKRVQRRKERREESKKTIEFLSEAQHIEDI . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 85386 85919 . + 0 GCA_005502385.1_02231 GCA_005502385.1_02231_gene,GCA_005502385.1_02231_mRNA GCA_005502385.1_02231 hypothetical protein """""" GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MSNSQVNKKSMSESKSIKTRQVFPQDTNHHHTMFGGSLMANIDEIAAITAMKHANAQVVTASTDSVDFLRPIKTGDITSYEAMVSYAGSSSMEICVQIIIEDVLNKERHLAALSFLTFVALDENGKPTRIPKVYPETKIEKWFYEGAPKRVQRRKERREESKKTIEFLSEAQHIEDI persistent 177 Acyl-CoA thioesterase WP_017175224.1 UPI000310E095 UniRef100_A0A4Q9WPM5,UniRef50_A0A654BBY2,UniRef90_A0A974QMT1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 85918 86155 . + . GCA_005502385.1_02232_gene GCA_005502385.1_02232 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 85918 86155 . + . GCA_005502385.1_02232_mRNA GCA_005502385.1_02232 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 . . . . . . . GCA_005502385.1|SCOV01000009.1 Infernal:001001 misc_RNA 85918 86155 63.9 + . GCA_005502385.1_02232 GCA_005502385.1_02232_gene,GCA_005502385.1_02232_mRNA GCA_005502385.1_02232 tsr24 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 86222 87367 . - . GCA_005502385.1_02233_gene GCA_005502385.1_02233 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTTSKIKQAISIYNDPWEAYNDIKQFDQLTLSNVEFTTTNLCNMRCSHCAVGYTLQTKDPDPLPMNLIYQRLDEIPNLRTMSITGGEPMFSKKSINNVVKPLLKYAHQRGIYVQMNSNLTLPQDRYLEIAEYIDVMHISHNWGTIQEFTEVGFGAMKKQPPLKAKLKLYEQMLDNASTLSDQGMFVSAETMLNQNTLPHLENIHKEIVNDMKCSRHEVHPMYPADFASQLNVLSLKDMKQAIHHLLDIRDKNTWMLFGTLPIYPCINDENDQLLLERLRNEKNVTVRNDPDGRSRLNVNVFSGDVIVTDFGDENGTISNIKNDKLTDVFDAWLSTDLAKSLNCHCEAFQCLGPNVLVKNMYYPNTNFRENEITMHTEHSFQ . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 86222 87367 . - . GCA_005502385.1_02233_mRNA GCA_005502385.1_02233 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTTSKIKQAISIYNDPWEAYNDIKQFDQLTLSNVEFTTTNLCNMRCSHCAVGYTLQTKDPDPLPMNLIYQRLDEIPNLRTMSITGGEPMFSKKSINNVVKPLLKYAHQRGIYVQMNSNLTLPQDRYLEIAEYIDVMHISHNWGTIQEFTEVGFGAMKKQPPLKAKLKLYEQMLDNASTLSDQGMFVSAETMLNQNTLPHLENIHKEIVNDMKCSRHEVHPMYPADFASQLNVLSLKDMKQAIHHLLDIRDKNTWMLFGTLPIYPCINDENDQLLLERLRNEKNVTVRNDPDGRSRLNVNVFSGDVIVTDFGDENGTISNIKNDKLTDVFDAWLSTDLAKSLNCHCEAFQCLGPNVLVKNMYYPNTNFRENEITMHTEHSFQ . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 86222 87367 . - 0 GCA_005502385.1_02233 GCA_005502385.1_02233_gene,GCA_005502385.1_02233_mRNA GCA_005502385.1_02233 7-carboxy-7-deazaguanine synthase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTTSKIKQAISIYNDPWEAYNDIKQFDQLTLSNVEFTTTNLCNMRCSHCAVGYTLQTKDPDPLPMNLIYQRLDEIPNLRTMSITGGEPMFSKKSINNVVKPLLKYAHQRGIYVQMNSNLTLPQDRYLEIAEYIDVMHISHNWGTIQEFTEVGFGAMKKQPPLKAKLKLYEQMLDNASTLSDQGMFVSAETMLNQNTLPHLENIHKEIVNDMKCSRHEVHPMYPADFASQLNVLSLKDMKQAIHHLLDIRDKNTWMLFGTLPIYPCINDENDQLLLERLRNEKNVTVRNDPDGRSRLNVNVFSGDVIVTDFGDENGTISNIKNDKLTDVFDAWLSTDLAKSLNCHCEAFQCLGPNVLVKNMYYPNTNFRENEITMHTEHSFQ persistent 381 yfkAB radical SAM/CxCxxxxC motif protein YfkAB GO:0008152,GO:0051539,GO:1904047 WP_137689716.1 UPI0010F56F76 UniRef100_UPI0010F56F76,UniRef50_B9E7Z7,UniRef90_A0A657LZL8 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 87511 87672 . + . GCA_005502385.1_02234_gene GCA_005502385.1_02234 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MDEKQTIEQIKTRLSKFLEDIDHVNPDEVSVKDIDEWIGLLDQLEEKVKLVSK . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 87511 87672 . + . GCA_005502385.1_02234_mRNA GCA_005502385.1_02234 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MDEKQTIEQIKTRLSKFLEDIDHVNPDEVSVKDIDEWIGLLDQLEEKVKLVSK . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 87511 87672 . + 0 GCA_005502385.1_02234 GCA_005502385.1_02234_gene,GCA_005502385.1_02234_mRNA GCA_005502385.1_02234 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MDEKQTIEQIKTRLSKFLEDIDHVNPDEVSVKDIDEWIGLLDQLEEKVKLVSK persistent 53 Cytosolic protein WP_002450046.1 UPI00019FB39E UniRef100_A0A4Q9WWI0,UniRef50_K9ALC9,UniRef90_A0A380G0Q2 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 87781 88299 . + . GCA_005502385.1_02235_gene GCA_005502385.1_02235 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTKKVAIILADEFEDIELTSPKEALEEAGFETEVIGDTANAEVVGKHGEKVTVNVSIADAKPENYDAILIPGGFSPDNLRGDAEGRYGTFAKYFTKNDVPTFAICHGPQVLIDTDDLNGRTLTAVLNVRKDLSNAGANVVDESVVVDNNIVTSRVPDDLDDFNREIVKKLND . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 87781 88299 . + . GCA_005502385.1_02235_mRNA GCA_005502385.1_02235 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTKKVAIILADEFEDIELTSPKEALEEAGFETEVIGDTANAEVVGKHGEKVTVNVSIADAKPENYDAILIPGGFSPDNLRGDAEGRYGTFAKYFTKNDVPTFAICHGPQVLIDTDDLNGRTLTAVLNVRKDLSNAGANVVDESVVVDNNIVTSRVPDDLDDFNREIVKKLND . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 87781 88299 . + 0 GCA_005502385.1_02235 GCA_005502385.1_02235_gene,GCA_005502385.1_02235_mRNA GCA_005502385.1_02235 putative protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MTKKVAIILADEFEDIELTSPKEALEEAGFETEVIGDTANAEVVGKHGEKVTVNVSIADAKPENYDAILIPGGFSPDNLRGDAEGRYGTFAKYFTKNDVPTFAICHGPQVLIDTDDLNGRTLTAVLNVRKDLSNAGANVVDESVVVDNNIVTSRVPDDLDDFNREIVKKLND persistent 172 Type 1 glutamine amidotransferase WP_017175222.1 UPI0002DA1AF3 UniRef100_A0A4V6MZG4,UniRef50_P0A0K3,UniRef90_A0A2K4DM91 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 88751 89563 . + . GCA_005502385.1_02236_gene GCA_005502385.1_02236 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKRRQRDNYPKEKTTYYQNEPYYNTYYQPVGSPPKKKKSKRLFLRMFIIFLIIFALFTGLMYFLSSRANVDDLQTIENKSNFVSSDNMPNYVKGAFISMEDERFSKHHGFDIKGTTRALFSTIGEREVQGGSTITQQTVKNYYYNNERSFTRKLKELFVAHKVEQQYSKNQILSFYLNNIYYGNNQYDIESAANYYFGATTNQNNSSYPIITVLQSAMLASKVNAPSVYDINNVSNNFKNRIKVNLEKMRQQNYISDSQYQEALSQLNNY . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 88751 89563 . + . GCA_005502385.1_02236_mRNA GCA_005502385.1_02236 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKRRQRDNYPKEKTTYYQNEPYYNTYYQPVGSPPKKKKSKRLFLRMFIIFLIIFALFTGLMYFLSSRANVDDLQTIENKSNFVSSDNMPNYVKGAFISMEDERFSKHHGFDIKGTTRALFSTIGEREVQGGSTITQQTVKNYYYNNERSFTRKLKELFVAHKVEQQYSKNQILSFYLNNIYYGNNQYDIESAANYYFGATTNQNNSSYPIITVLQSAMLASKVNAPSVYDINNVSNNFKNRIKVNLEKMRQQNYISDSQYQEALSQLNNY . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 88751 89563 . + 0 GCA_005502385.1_02236 GCA_005502385.1_02236_gene,GCA_005502385.1_02236_mRNA GCA_005502385.1_02236 Monofunctional glycosyltransferase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKRRQRDNYPKEKTTYYQNEPYYNTYYQPVGSPPKKKKSKRLFLRMFIIFLIIFALFTGLMYFLSSRANVDDLQTIENKSNFVSSDNMPNYVKGAFISMEDERFSKHHGFDIKGTTRALFSTIGEREVQGGSTITQQTVKNYYYNNERSFTRKLKELFVAHKVEQQYSKNQILSFYLNNIYYGNNQYDIESAANYYFGATTNQNNSSYPIITVLQSAMLASKVNAPSVYDINNVSNNFKNRIKVNLEKMRQQNYISDSQYQEALSQLNNY persistent 270 sgtB monofunctional peptidoglycan glycosyltransferase SgtB 2.4.-.- WP_017175221.1 UPI0003068CBE UniRef100_A0A4Q9WPM6,UniRef50_Q93Q23,UniRef90_A0AAE5JJC7 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 89732 90535 . + . GCA_005502385.1_02237_gene GCA_005502385.1_02237 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MPKITKIEVQKNNKERFNLFLDEAFEMGIDIDTLVKFNLKKNQMIDAAEMEKIQKYEHYRLGVNMAIQYLSYKKRTEKEVSDYLKKNDINEMAVQKVIEYCYKEQYINHEDYAESLKNTMINTTDKGPEVFKQKLYQVGVEPNIIDRYVKRYEEEQPIESIIHVAKKIMKTKKGPVVKVKQKVMHSLIQKGYTIETAQYVLNELDFAQDEEVLDDLLQKDLEKVYNKQRRKYDGNTLKMKTIEALMRKGYNYDKIKIKLAESGILDE . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 89732 90535 . + . GCA_005502385.1_02237_mRNA GCA_005502385.1_02237 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MPKITKIEVQKNNKERFNLFLDEAFEMGIDIDTLVKFNLKKNQMIDAAEMEKIQKYEHYRLGVNMAIQYLSYKKRTEKEVSDYLKKNDINEMAVQKVIEYCYKEQYINHEDYAESLKNTMINTTDKGPEVFKQKLYQVGVEPNIIDRYVKRYEEEQPIESIIHVAKKIMKTKKGPVVKVKQKVMHSLIQKGYTIETAQYVLNELDFAQDEEVLDDLLQKDLEKVYNKQRRKYDGNTLKMKTIEALMRKGYNYDKIKIKLAESGILDE . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 89732 90535 . + 0 GCA_005502385.1_02237 GCA_005502385.1_02237_gene,GCA_005502385.1_02237_mRNA GCA_005502385.1_02237 Regulatory protein RecX GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MPKITKIEVQKNNKERFNLFLDEAFEMGIDIDTLVKFNLKKNQMIDAAEMEKIQKYEHYRLGVNMAIQYLSYKKRTEKEVSDYLKKNDINEMAVQKVIEYCYKEQYINHEDYAESLKNTMINTTDKGPEVFKQKLYQVGVEPNIIDRYVKRYEEEQPIESIIHVAKKIMKTKKGPVVKVKQKVMHSLIQKGYTIETAQYVLNELDFAQDEEVLDDLLQKDLEKVYNKQRRKYDGNTLKMKTIEALMRKGYNYDKIKIKLAESGILDE persistent 267 recX recombination regulator RecX GO:0006282 WP_049415193.1 UPI00066ED099 UniRef100_UPI00066ED099,UniRef50_Q2G2G9,UniRef90_A0A3S7GXN5 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 90528 90842 . + . GCA_005502385.1_02238_gene GCA_005502385.1_02238 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MSDKRLSEMSEQELRHEIQLCKEKMRKAEMNGIMNEYDVYESKVIVAESYLVDRSKINIGRMYKLNDGSEQYFKVERLKGVFAWGYRINSTNPEEGLPIALLKI . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 90528 90842 . + . GCA_005502385.1_02238_mRNA GCA_005502385.1_02238 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MSDKRLSEMSEQELRHEIQLCKEKMRKAEMNGIMNEYDVYESKVIVAESYLVDRSKINIGRMYKLNDGSEQYFKVERLKGVFAWGYRINSTNPEEGLPIALLKI . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 90528 90842 . + 0 GCA_005502385.1_02238 GCA_005502385.1_02238_gene,GCA_005502385.1_02238_mRNA GCA_005502385.1_02238 putative protein YfhH GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MSDKRLSEMSEQELRHEIQLCKEKMRKAEMNGIMNEYDVYESKVIVAESYLVDRSKINIGRMYKLNDGSEQYFKVERLKGVFAWGYRINSTNPEEGLPIALLKI persistent 104 DUF1811 domain-containing protein WP_002455132.1 UPI0001EF5101 UniRef100_A0A4Q9WRT5,UniRef50_G5JJ30,UniRef90_A0AAE5MXW7 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 90858 92375 . + . GCA_005502385.1_02239_gene GCA_005502385.1_02239 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MGSSIVLKLLNVTQYYRNQKNRKWYLPFGYGAEDIELNKITLHIYQGEALALIGEPGSSKTLIGRIMAQDIAPDRGKVVQSASIYYGDIKNKHLLNMSVKSYIEETQCLFNYETSSHIVDQIIKYAHLDDKSSIQVNKLSHSEYAQLILSVARVCKTEIIILSHILEYLDEAFLNKAKQLSKDYVSNDLSIIFVDDDISKISQVSNYVTWISHGQVRMEGSLNDVLPVFNDHERDRLSIEDEETLKNFDLDWKKSRSRLPEMSYNFKRVERYKHVKVPDFIVKFWTLLVSTLIVLVLLGALVVNNIGKIEIPINESQKKVQNQDTDSFENKLSYGIVLHDEVTLSNHQDIEMPKYSFVTITGESASKYRLIVDDDTYEVGKNKIYYFNPAALYETHKFSTLAPYMKSNYSKYVDYFNTQLHKPHKQVKKTLVPEKDQRFVVPITQQPIKMLFNDEDKLTGFVFPIVDKSKLERKFNIKSNVWISKLNNGYLIADMKNSKWIYIEL . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 90858 92375 . + . GCA_005502385.1_02239_mRNA GCA_005502385.1_02239 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MGSSIVLKLLNVTQYYRNQKNRKWYLPFGYGAEDIELNKITLHIYQGEALALIGEPGSSKTLIGRIMAQDIAPDRGKVVQSASIYYGDIKNKHLLNMSVKSYIEETQCLFNYETSSHIVDQIIKYAHLDDKSSIQVNKLSHSEYAQLILSVARVCKTEIIILSHILEYLDEAFLNKAKQLSKDYVSNDLSIIFVDDDISKISQVSNYVTWISHGQVRMEGSLNDVLPVFNDHERDRLSIEDEETLKNFDLDWKKSRSRLPEMSYNFKRVERYKHVKVPDFIVKFWTLLVSTLIVLVLLGALVVNNIGKIEIPINESQKKVQNQDTDSFENKLSYGIVLHDEVTLSNHQDIEMPKYSFVTITGESASKYRLIVDDDTYEVGKNKIYYFNPAALYETHKFSTLAPYMKSNYSKYVDYFNTQLHKPHKQVKKTLVPEKDQRFVVPITQQPIKMLFNDEDKLTGFVFPIVDKSKLERKFNIKSNVWISKLNNGYLIADMKNSKWIYIEL . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 90858 92375 . + 0 GCA_005502385.1_02239 GCA_005502385.1_02239_gene,GCA_005502385.1_02239_mRNA GCA_005502385.1_02239 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MGSSIVLKLLNVTQYYRNQKNRKWYLPFGYGAEDIELNKITLHIYQGEALALIGEPGSSKTLIGRIMAQDIAPDRGKVVQSASIYYGDIKNKHLLNMSVKSYIEETQCLFNYETSSHIVDQIIKYAHLDDKSSIQVNKLSHSEYAQLILSVARVCKTEIIILSHILEYLDEAFLNKAKQLSKDYVSNDLSIIFVDDDISKISQVSNYVTWISHGQVRMEGSLNDVLPVFNDHERDRLSIEDEETLKNFDLDWKKSRSRLPEMSYNFKRVERYKHVKVPDFIVKFWTLLVSTLIVLVLLGALVVNNIGKIEIPINESQKKVQNQDTDSFENKLSYGIVLHDEVTLSNHQDIEMPKYSFVTITGESASKYRLIVDDDTYEVGKNKIYYFNPAALYETHKFSTLAPYMKSNYSKYVDYFNTQLHKPHKQVKKTLVPEKDQRFVVPITQQPIKMLFNDEDKLTGFVFPIVDKSKLERKFNIKSNVWISKLNNGYLIADMKNSKWIYIEL persistent 505 ATP-binding cassette domain-containing protein WP_017175219.1 UPI000306840A UniRef100_A0A3S7GZR9,UniRef50_Q2G2H3,UniRef90_A0A3S7GZR9 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 92384 93148 . + . GCA_005502385.1_02240_gene GCA_005502385.1_02240 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MIDKLILYFKHFPSLLHLAKAKVKETWKYDVILFLIQLIIISIIIGVMYLFNTEEIEKAQWIYRMIAFYTFVTIAYIIYKSFKLYKYDYLIAKSFQLTPIITPILNALIGAIIICVLSLITSIFKPVNLETSVISFVYFILMSIIFIVFISITLSLLTLISKKVFKFYVVATIVLFFLVPIIFIPNNKANMIDQILKINPLYYLIDGLSSSIVFGAVNMYNIVYHIYFIAFLVLIGVINFILTRLVAHKKYEYI . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 92384 93148 . + . GCA_005502385.1_02240_mRNA GCA_005502385.1_02240 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MIDKLILYFKHFPSLLHLAKAKVKETWKYDVILFLIQLIIISIIIGVMYLFNTEEIEKAQWIYRMIAFYTFVTIAYIIYKSFKLYKYDYLIAKSFQLTPIITPILNALIGAIIICVLSLITSIFKPVNLETSVISFVYFILMSIIFIVFISITLSLLTLISKKVFKFYVVATIVLFFLVPIIFIPNNKANMIDQILKINPLYYLIDGLSSSIVFGAVNMYNIVYHIYFIAFLVLIGVINFILTRLVAHKKYEYI . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 92384 93148 . + 0 GCA_005502385.1_02240 GCA_005502385.1_02240_gene,GCA_005502385.1_02240_mRNA GCA_005502385.1_02240 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MIDKLILYFKHFPSLLHLAKAKVKETWKYDVILFLIQLIIISIIIGVMYLFNTEEIEKAQWIYRMIAFYTFVTIAYIIYKSFKLYKYDYLIAKSFQLTPIITPILNALIGAIIICVLSLITSIFKPVNLETSVISFVYFILMSIIFIVFISITLSLLTLISKKVFKFYVVATIVLFFLVPIIFIPNNKANMIDQILKINPLYYLIDGLSSSIVFGAVNMYNIVYHIYFIAFLVLIGVINFILTRLVAHKKYEYI persistent 254 Teichoic acid transporter WP_019835724.1 UPI0002E00817 UniRef100_A0A3S7H0T7,UniRef50_Q4L7H6,UniRef90_A0A3S7H0T7 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 93266 94243 . - . GCA_005502385.1_02241_gene GCA_005502385.1_02241 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MDTATHIAIGIGLTALATQDPAMSHSMTATATTLIAGSLIPDGDTVLKLKNNATYISHHRGITHSIPFTILWPILLAFIIYVIFPHVDVTHIWMWAQLAVFLHVFVDIFNSYGTQALRPISNKWIQLGVINTFDPIIFLILCIGITLWLLGIHPYLVFFPIIGVLIIYYIVRFKMQSIIKSQALKLIHDEHHPVKIFVAPTMKFMEWRVAIQTESYDYVGRAYGRNITFSDKVKRQQFSSDTLLWQIKSNPEIRTFLKFSSIYRWQIRKLDDQTTEIRLIDLRYLNKGHYSFAAIAHLTQDQKIDHSYIGWVFTEEKLQKKLYSH . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 93266 94243 . - . GCA_005502385.1_02241_mRNA GCA_005502385.1_02241 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MDTATHIAIGIGLTALATQDPAMSHSMTATATTLIAGSLIPDGDTVLKLKNNATYISHHRGITHSIPFTILWPILLAFIIYVIFPHVDVTHIWMWAQLAVFLHVFVDIFNSYGTQALRPISNKWIQLGVINTFDPIIFLILCIGITLWLLGIHPYLVFFPIIGVLIIYYIVRFKMQSIIKSQALKLIHDEHHPVKIFVAPTMKFMEWRVAIQTESYDYVGRAYGRNITFSDKVKRQQFSSDTLLWQIKSNPEIRTFLKFSSIYRWQIRKLDDQTTEIRLIDLRYLNKGHYSFAAIAHLTQDQKIDHSYIGWVFTEEKLQKKLYSH . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 93266 94243 . - 0 GCA_005502385.1_02241 GCA_005502385.1_02241_gene,GCA_005502385.1_02241_mRNA GCA_005502385.1_02241 putative protein YfhP GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MDTATHIAIGIGLTALATQDPAMSHSMTATATTLIAGSLIPDGDTVLKLKNNATYISHHRGITHSIPFTILWPILLAFIIYVIFPHVDVTHIWMWAQLAVFLHVFVDIFNSYGTQALRPISNKWIQLGVINTFDPIIFLILCIGITLWLLGIHPYLVFFPIIGVLIIYYIVRFKMQSIIKSQALKLIHDEHHPVKIFVAPTMKFMEWRVAIQTESYDYVGRAYGRNITFSDKVKRQQFSSDTLLWQIKSNPEIRTFLKFSSIYRWQIRKLDDQTTEIRLIDLRYLNKGHYSFAAIAHLTQDQKIDHSYIGWVFTEEKLQKKLYSH persistent 325 Metal-dependent hydrolase WP_017175217.1 UPI00030FAEB5 UniRef100_A0A3S7H0M6,UniRef50_Q2G2V9,UniRef90_A0A3S7H0M6 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 94379 95425 . + . GCA_005502385.1_02242_gene GCA_005502385.1_02242 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MLNETTFKNNIVTWFEKNQREMPWRETTNPYYIWLSEVMLQQTQVKTVIDYYNKFIHRFPTVKALSEAEEDEVLKYWEGLGYYSRARNFHTAIKEVHHNYNGEVPSSPKVFGELKGVGPYTQAAVMSIAFNRPLATVDGNVFRVWTRLNNDYRDIKLQSTRKSFEKELQPFVQEEAGTFNQSMMELGATICTPKNPLCLFCPVQENCEAFRKGTTLELPIKTKKQAKKIINQEVFLVRNQKGQYLIEKRQEKLLNGMWQFPMFESPNGIQKLEYKLNQSLTLAENAIFQLKHQFTHKTWNLNVYSVIEDINIDSAQLPDFMEWFDLENRDDYSFPVSMSKIYEFIVGK . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 94379 95425 . + . GCA_005502385.1_02242_mRNA GCA_005502385.1_02242 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MLNETTFKNNIVTWFEKNQREMPWRETTNPYYIWLSEVMLQQTQVKTVIDYYNKFIHRFPTVKALSEAEEDEVLKYWEGLGYYSRARNFHTAIKEVHHNYNGEVPSSPKVFGELKGVGPYTQAAVMSIAFNRPLATVDGNVFRVWTRLNNDYRDIKLQSTRKSFEKELQPFVQEEAGTFNQSMMELGATICTPKNPLCLFCPVQENCEAFRKGTTLELPIKTKKQAKKIINQEVFLVRNQKGQYLIEKRQEKLLNGMWQFPMFESPNGIQKLEYKLNQSLTLAENAIFQLKHQFTHKTWNLNVYSVIEDINIDSAQLPDFMEWFDLENRDDYSFPVSMSKIYEFIVGK . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 94379 95425 . + 0 GCA_005502385.1_02242 GCA_005502385.1_02242_gene,GCA_005502385.1_02242_mRNA GCA_005502385.1_02242 Adenine DNA glycosylase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MLNETTFKNNIVTWFEKNQREMPWRETTNPYYIWLSEVMLQQTQVKTVIDYYNKFIHRFPTVKALSEAEEDEVLKYWEGLGYYSRARNFHTAIKEVHHNYNGEVPSSPKVFGELKGVGPYTQAAVMSIAFNRPLATVDGNVFRVWTRLNNDYRDIKLQSTRKSFEKELQPFVQEEAGTFNQSMMELGATICTPKNPLCLFCPVQENCEAFRKGTTLELPIKTKKQAKKIINQEVFLVRNQKGQYLIEKRQEKLLNGMWQFPMFESPNGIQKLEYKLNQSLTLAENAIFQLKHQFTHKTWNLNVYSVIEDINIDSAQLPDFMEWFDLENRDDYSFPVSMSKIYEFIVGK persistent 348 mutY A/G-specific adenine glycosylase 3.2.2.31 GO:0006284,GO:0019104 WP_017175216.1 UPI0002F1A59B UniRef100_A0A3S7GWY1,UniRef50_A0A7U7JQ99,UniRef90_A0A3S7GWY1 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 95518 96060 . + . GCA_005502385.1_02243_gene GCA_005502385.1_02243 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MVKESIPKEGENIKIQSYKHDGNIHRVWSETTILKGTDHVIIGGNDHTLVTESDGRTWITREPAIVYFHSEYWFNVICMFREDGIYYYCNLSSPFVCDEEALKYIDYDLDIKVYPNGKYHLLDEDEYEQHMKQMNYPHEIDVILRRNVDILQQWIEQKKGPFAPDFIKVWKQRYKKIRNY . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 95518 96060 . + . GCA_005502385.1_02243_mRNA GCA_005502385.1_02243 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MVKESIPKEGENIKIQSYKHDGNIHRVWSETTILKGTDHVIIGGNDHTLVTESDGRTWITREPAIVYFHSEYWFNVICMFREDGIYYYCNLSSPFVCDEEALKYIDYDLDIKVYPNGKYHLLDEDEYEQHMKQMNYPHEIDVILRRNVDILQQWIEQKKGPFAPDFIKVWKQRYKKIRNY . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 95518 96060 . + 0 GCA_005502385.1_02243 GCA_005502385.1_02243_gene,GCA_005502385.1_02243_mRNA GCA_005502385.1_02243 hypothetical protein UPF0374 protein SP_1903 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MVKESIPKEGENIKIQSYKHDGNIHRVWSETTILKGTDHVIIGGNDHTLVTESDGRTWITREPAIVYFHSEYWFNVICMFREDGIYYYCNLSSPFVCDEEALKYIDYDLDIKVYPNGKYHLLDEDEYEQHMKQMNYPHEIDVILRRNVDILQQWIEQKKGPFAPDFIKVWKQRYKKIRNY persistent 180 ygaC Nucleoside triphosphate/diphosphate phosphatase 3.6.1.15,3.6.1.6 GO:0000287,GO:0017110,GO:0017111 COG3557,S WP_017175215.1 UPI00031BCAB8 UniRef100_A0A4Q9WTA4,UniRef50_Q2G2M8,UniRef90_Q2G2M8 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 96215 97951 . + . GCA_005502385.1_02244_gene GCA_005502385.1_02244 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MIRRYLEFVKPYKYRIFATIIIGIIKFGIPMLIPLLIKYAIDGVINNGTLTTNEKFHHLAIAIGITLFIFLIVRPPIEYLRQYLAQWTSNKILYDIRKQLYDHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCVTIIIALSIMFFLDIKLTLAAIIIFPFYIFTVYFFFGRLRKLTRKRSQALAEVQGFLHERVQGMSVIKSFAIEDNEAKNFDKKNKNFLSRAFQHTSWNAYSFAAINTVTDLGPIIVIGVGSYLAITGSITVGTLAAFVGYLEQLFGPLRRLVSSFTTLTQSFASMDRIFQLMDEDYDIKNKKGAQPIEIKEGHIELKNVSFKYNEDESLVLKNINLNINKGETVAFVGMSGGGKSTLINLIPRFYDVSEGEILIDSHNIKDYLTGSLRNQIGLVQQDNILFSDTVRENILLGRPDATEEEIIEAAKMANAHDFIMNLPNGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESEAIIQDALDVLSKDRTTLIVAHRLSTITHADKIIVMQHGQIVETGTHKELIAKKGEYEHLYSIQDL . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 96215 97951 . + . GCA_005502385.1_02244_mRNA GCA_005502385.1_02244 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MIRRYLEFVKPYKYRIFATIIIGIIKFGIPMLIPLLIKYAIDGVINNGTLTTNEKFHHLAIAIGITLFIFLIVRPPIEYLRQYLAQWTSNKILYDIRKQLYDHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCVTIIIALSIMFFLDIKLTLAAIIIFPFYIFTVYFFFGRLRKLTRKRSQALAEVQGFLHERVQGMSVIKSFAIEDNEAKNFDKKNKNFLSRAFQHTSWNAYSFAAINTVTDLGPIIVIGVGSYLAITGSITVGTLAAFVGYLEQLFGPLRRLVSSFTTLTQSFASMDRIFQLMDEDYDIKNKKGAQPIEIKEGHIELKNVSFKYNEDESLVLKNINLNINKGETVAFVGMSGGGKSTLINLIPRFYDVSEGEILIDSHNIKDYLTGSLRNQIGLVQQDNILFSDTVRENILLGRPDATEEEIIEAAKMANAHDFIMNLPNGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESEAIIQDALDVLSKDRTTLIVAHRLSTITHADKIIVMQHGQIVETGTHKELIAKKGEYEHLYSIQDL . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 96215 97951 . + 0 GCA_005502385.1_02244 GCA_005502385.1_02244_gene,GCA_005502385.1_02244_mRNA GCA_005502385.1_02244 Putative multidrug export ATP-binding/permease protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MIRRYLEFVKPYKYRIFATIIIGIIKFGIPMLIPLLIKYAIDGVINNGTLTTNEKFHHLAIAIGITLFIFLIVRPPIEYLRQYLAQWTSNKILYDIRKQLYDHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCVTIIIALSIMFFLDIKLTLAAIIIFPFYIFTVYFFFGRLRKLTRKRSQALAEVQGFLHERVQGMSVIKSFAIEDNEAKNFDKKNKNFLSRAFQHTSWNAYSFAAINTVTDLGPIIVIGVGSYLAITGSITVGTLAAFVGYLEQLFGPLRRLVSSFTTLTQSFASMDRIFQLMDEDYDIKNKKGAQPIEIKEGHIELKNVSFKYNEDESLVLKNINLNINKGETVAFVGMSGGGKSTLINLIPRFYDVSEGEILIDSHNIKDYLTGSLRNQIGLVQQDNILFSDTVRENILLGRPDATEEEIIEAAKMANAHDFIMNLPNGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESEAIIQDALDVLSKDRTTLIVAHRLSTITHADKIIVMQHGQIVETGTHKELIAKKGEYEHLYSIQDL persistent 578 mdlB ABC transporter ATP-binding protein COG1132,V WP_017175214.1 UPI0003109CF1 UniRef100_A0A4Q9WQH6,UniRef50_P71082,UniRef90_A0A0S4MF40 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 98029 99123 . - . GCA_005502385.1_02245_gene GCA_005502385.1_02245 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKLGARILKTGIAIILALFIASFLPDNVGLKSVAGISAIFAMQPNIYRSMKTISEQATGNLIGAILAVIMVTIFGKNIVIMGITVILLIAILYKLNLAHVATLAGVTALIIMGQHTGSFYLAATFRFILVMIGVLSASLVNLVFLPPKFETKIYHNAVNISSDIFIWFKLVINDTSEYHQIKEDGEQLESRIIKLEQIYNYYHEERTFTRKAAFQQNRKKILFKEVVGTTRQAYEVLNRMARYQNDLHNTNHNLLFQIKLELDSLTAYHEQILKSLSKKARYNVDDFDNQILNPQKKNLMDAFQYQLIQNPYQVEYSYSNIMQIIAAIEEYRYYLEHLDRLRLSFFTYHRNDTDIEIQDEDFDL . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 98029 99123 . - . GCA_005502385.1_02245_mRNA GCA_005502385.1_02245 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKLGARILKTGIAIILALFIASFLPDNVGLKSVAGISAIFAMQPNIYRSMKTISEQATGNLIGAILAVIMVTIFGKNIVIMGITVILLIAILYKLNLAHVATLAGVTALIIMGQHTGSFYLAATFRFILVMIGVLSASLVNLVFLPPKFETKIYHNAVNISSDIFIWFKLVINDTSEYHQIKEDGEQLESRIIKLEQIYNYYHEERTFTRKAAFQQNRKKILFKEVVGTTRQAYEVLNRMARYQNDLHNTNHNLLFQIKLELDSLTAYHEQILKSLSKKARYNVDDFDNQILNPQKKNLMDAFQYQLIQNPYQVEYSYSNIMQIIAAIEEYRYYLEHLDRLRLSFFTYHRNDTDIEIQDEDFDL . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 98029 99123 . - 0 GCA_005502385.1_02245 GCA_005502385.1_02245_gene,GCA_005502385.1_02245_mRNA GCA_005502385.1_02245 hypothetical protein GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKLGARILKTGIAIILALFIASFLPDNVGLKSVAGISAIFAMQPNIYRSMKTISEQATGNLIGAILAVIMVTIFGKNIVIMGITVILLIAILYKLNLAHVATLAGVTALIIMGQHTGSFYLAATFRFILVMIGVLSASLVNLVFLPPKFETKIYHNAVNISSDIFIWFKLVINDTSEYHQIKEDGEQLESRIIKLEQIYNYYHEERTFTRKAAFQQNRKKILFKEVVGTTRQAYEVLNRMARYQNDLHNTNHNLLFQIKLELDSLTAYHEQILKSLSKKARYNVDDFDNQILNPQKKNLMDAFQYQLIQNPYQVEYSYSNIMQIIAAIEEYRYYLEHLDRLRLSFFTYHRNDTDIEIQDEDFDL persistent 364 ygaE Aromatic acid exporter family protein COG4129,S WP_017175213.1 UPI000301E7CF UniRef100_A0A4V2KX45,UniRef50_Q2G2N1,UniRef90_A0A2T4L2L0 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 99278 100567 . - . GCA_005502385.1_02246_gene GCA_005502385.1_02246 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNFTESERLQKLSNEYILGGVNSPSRSYKAVGGGAPVVMREGHGAYLYDVDGNKYIDYLQAYGPIITGHAHPHITEAIQDQAAKGVLYGTPTELEIDFSKKLRAAIPSLEKIRFVNSGTEAVMTTIRVARAYTKRNKIIKFAGSYHGHSDLVLVAAGSGPSQLGSPDSAGVPESVAREVITVPFNDIESYKEAMSHWGDEVAAVLVEPIVGNFGMVKPQPGFLEEVNNITHEHGALVIYDEVITAFRFHYGAAQDLLNVYPDLTAFGKIVGGGLPIGGYGGRQDIMEHVAPLGPAYQAGTMAGNPLSMRAGIALLEVLEQDGVYEKLDNLGKRLEDGLNKLIEKHHITATINRIYGSLTLYFTDEKVTHYEQVENSDGEAFAKFFKLMLNQGINLAPSKFEAWFLTTEHTEEDIDRTLEAADYAFSQMK . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 99278 100567 . - . GCA_005502385.1_02246_mRNA GCA_005502385.1_02246 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNFTESERLQKLSNEYILGGVNSPSRSYKAVGGGAPVVMREGHGAYLYDVDGNKYIDYLQAYGPIITGHAHPHITEAIQDQAAKGVLYGTPTELEIDFSKKLRAAIPSLEKIRFVNSGTEAVMTTIRVARAYTKRNKIIKFAGSYHGHSDLVLVAAGSGPSQLGSPDSAGVPESVAREVITVPFNDIESYKEAMSHWGDEVAAVLVEPIVGNFGMVKPQPGFLEEVNNITHEHGALVIYDEVITAFRFHYGAAQDLLNVYPDLTAFGKIVGGGLPIGGYGGRQDIMEHVAPLGPAYQAGTMAGNPLSMRAGIALLEVLEQDGVYEKLDNLGKRLEDGLNKLIEKHHITATINRIYGSLTLYFTDEKVTHYEQVENSDGEAFAKFFKLMLNQGINLAPSKFEAWFLTTEHTEEDIDRTLEAADYAFSQMK . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 99278 100567 . - 0 GCA_005502385.1_02246 GCA_005502385.1_02246_gene,GCA_005502385.1_02246_mRNA GCA_005502385.1_02246 Glutamate-1-semialdehyde 2%2C1-aminomutase 2 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MNFTESERLQKLSNEYILGGVNSPSRSYKAVGGGAPVVMREGHGAYLYDVDGNKYIDYLQAYGPIITGHAHPHITEAIQDQAAKGVLYGTPTELEIDFSKKLRAAIPSLEKIRFVNSGTEAVMTTIRVARAYTKRNKIIKFAGSYHGHSDLVLVAAGSGPSQLGSPDSAGVPESVAREVITVPFNDIESYKEAMSHWGDEVAAVLVEPIVGNFGMVKPQPGFLEEVNNITHEHGALVIYDEVITAFRFHYGAAQDLLNVYPDLTAFGKIVGGGLPIGGYGGRQDIMEHVAPLGPAYQAGTMAGNPLSMRAGIALLEVLEQDGVYEKLDNLGKRLEDGLNKLIEKHHITATINRIYGSLTLYFTDEKVTHYEQVENSDGEAFAKFFKLMLNQGINLAPSKFEAWFLTTEHTEEDIDRTLEAADYAFSQMK persistent 429 hemL2 glutamate-1-semialdehyde 2,1-aminomutase 5.4.3.8 GO:0005737,GO:0006782,GO:0008483,GO:0030170,GO:0033014,GO:0042286 COG0001,H WP_017175212.1 UPI0002F2FB4E UniRef100_A0A4Q9WPN5,UniRef50_Q2G283,UniRef90_Q2G283 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 100648 101103 . + . GCA_005502385.1_02247_gene GCA_005502385.1_02247 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MLKIGDLFPKFELENQNGELITNEKIMGEKTILYFYPRDNTPTCTTEACDFRDNIQYFNDMKVKVYGISGDSRKKHENFINKHHLNFDLLVDDEFKLSKAVGIYRLKKSFGKENMGIVRTTFVIDEAGYITNIIEKVKVKTQIDELKQMLE . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 100648 101103 . + . GCA_005502385.1_02247_mRNA GCA_005502385.1_02247 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MLKIGDLFPKFELENQNGELITNEKIMGEKTILYFYPRDNTPTCTTEACDFRDNIQYFNDMKVKVYGISGDSRKKHENFINKHHLNFDLLVDDEFKLSKAVGIYRLKKSFGKENMGIVRTTFVIDEAGYITNIIEKVKVKTQIDELKQMLE . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 100648 101103 . + 0 GCA_005502385.1_02247 GCA_005502385.1_02247_gene,GCA_005502385.1_02247_mRNA GCA_005502385.1_02247 Putative peroxiredoxin bcp GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MLKIGDLFPKFELENQNGELITNEKIMGEKTILYFYPRDNTPTCTTEACDFRDNIQYFNDMKVKVYGISGDSRKKHENFINKHHLNFDLLVDDEFKLSKAVGIYRLKKSFGKENMGIVRTTFVIDEAGYITNIIEKVKVKTQIDELKQMLE persistent 151 thioredoxin-dependent peroxiredoxin 1.11.1.24 WP_017175211.1 UPI000309B2EA UniRef100_A0A4Q9WPN1,UniRef50_Q5HN72,UniRef90_A0A974QMC4 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 101109 102059 . + . GCA_005502385.1_02248_gene GCA_005502385.1_02248 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKIVSLKRLGNIENELIEKYPDISFLFYDKADNIPDNEKKELEVLIGYDGEINERFIKSCPNLKWIAWYATGVNNLPLEYIKNKGIILTNTRGIQSKQLSEYILTFILDDHKKMKTSFINQQKHIYDSTLTGKRLKDETILFLGTGAIAQDTVKLLTPFELKIIGVSKTGKQKEGFNQTYEINELDELLGEADIIINTLPETKETYHLLNKHHFQLMKEDTLFINVGRGTIVEEDDLIEILKEKLIRHAYLDVFENEPLESEHPLYDLDNVTITAHITGNDKENKKEATKIFERNLSHFLNKEEISENVVDLKDGY . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 101109 102059 . + . GCA_005502385.1_02248_mRNA GCA_005502385.1_02248 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKIVSLKRLGNIENELIEKYPDISFLFYDKADNIPDNEKKELEVLIGYDGEINERFIKSCPNLKWIAWYATGVNNLPLEYIKNKGIILTNTRGIQSKQLSEYILTFILDDHKKMKTSFINQQKHIYDSTLTGKRLKDETILFLGTGAIAQDTVKLLTPFELKIIGVSKTGKQKEGFNQTYEINELDELLGEADIIINTLPETKETYHLLNKHHFQLMKEDTLFINVGRGTIVEEDDLIEILKEKLIRHAYLDVFENEPLESEHPLYDLDNVTITAHITGNDKENKKEATKIFERNLSHFLNKEEISENVVDLKDGY . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 101109 102059 . + 0 GCA_005502385.1_02248 GCA_005502385.1_02248_gene,GCA_005502385.1_02248_mRNA GCA_005502385.1_02248 Hydroxypyruvate reductase GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MKIVSLKRLGNIENELIEKYPDISFLFYDKADNIPDNEKKELEVLIGYDGEINERFIKSCPNLKWIAWYATGVNNLPLEYIKNKGIILTNTRGIQSKQLSEYILTFILDDHKKMKTSFINQQKHIYDSTLTGKRLKDETILFLGTGAIAQDTVKLLTPFELKIIGVSKTGKQKEGFNQTYEINELDELLGEADIIINTLPETKETYHLLNKHHFQLMKEDTLFINVGRGTIVEEDDLIEILKEKLIRHAYLDVFENEPLESEHPLYDLDNVTITAHITGNDKENKKEATKIFERNLSHFLNKEEISENVVDLKDGY persistent 316 Phosphoglycerate dehydrogenase WP_017175210.1 UPI0002D27778 UniRef100_A0A4Q9WRU6,UniRef50_Q2G281,UniRef90_A0A4Q9WRU6 . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka gene 102143 102604 . + . GCA_005502385.1_02249_gene GCA_005502385.1_02249 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MVKMMSAEIESIEHELEQAIIALRKSGVRITPQRQAIVRFLISSHTHPTADEIYQALSPDFPNISVATIYNNLRVFKKIGIVKELTYGDASSRFDFNTHNHYHVICERCGKIVDFHYPQLDEIEQLAQHVTNFDVTHHRMEIYGLCEECKNKE . . . . . . . GCA_005502385.1|SCOV01000009.1 prokka mRNA 102143 102604 . + . GCA_005502385.1_02249_mRNA GCA_005502385.1_02249 GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MVKMMSAEIESIEHELEQAIIALRKSGVRITPQRQAIVRFLISSHTHPTADEIYQALSPDFPNISVATIYNNLRVFKKIGIVKELTYGDASSRFDFNTHNHYHVICERCGKIVDFHYPQLDEIEQLAQHVTNFDVTHHRMEIYGLCEECKNKE . . . . . . . GCA_005502385.1|SCOV01000009.1 Prodigal:002006 CDS 102143 102604 . + 0 GCA_005502385.1_02249 GCA_005502385.1_02249_gene,GCA_005502385.1_02249_mRNA GCA_005502385.1_02249 Peroxide-responsive repressor PerR GCA_005502385.1 SCOV01000009.1 GCA_005502385.1|SCOV01000009.1 GCA_005502385.1_SCOV01000009.1 MVKMMSAEIESIEHELEQAIIALRKSGVRITPQRQAIVRFLISSHTHPTADEIYQALSPDFPNISVATIYNNLRVFKKIGIVKELTYGDASSRFDFNTHNHYHVICERCGKIVDFHYPQLDEIEQLAQHVTNFDVTHHRMEIYGLCEECKNKE persistent 153 perR peroxide-responsive transcriptional repressor PerR UniRef50_P71086,UniRef90_A0A1L8Y4F8 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 27 114 . + . GCA_005502385.1_00001_gene GCA_005502385.1_00001 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 27 114 . + . GCA_005502385.1_00001_mRNA GCA_005502385.1_00001 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 27 114 . + . GCA_005502385.1_00001 GCA_005502385.1_00001_gene,GCA_005502385.1_00001_mRNA GCA_005502385.1_00001 tRNA-Leu(taa) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 123 198 . + . GCA_005502385.1_00002_gene GCA_005502385.1_00002 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 123 198 . + . GCA_005502385.1_00002_mRNA GCA_005502385.1_00002 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 123 198 . + . GCA_005502385.1_00002 GCA_005502385.1_00002_gene,GCA_005502385.1_00002_mRNA GCA_005502385.1_00002 tRNA-Arg(acg) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 206 279 . + . GCA_005502385.1_00003_gene GCA_005502385.1_00003 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 206 279 . + . GCA_005502385.1_00003_mRNA GCA_005502385.1_00003 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 206 279 . + . GCA_005502385.1_00003 GCA_005502385.1_00003_gene,GCA_005502385.1_00003_mRNA GCA_005502385.1_00003 tRNA-Pro(tgg) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 302 377 . + . GCA_005502385.1_00004_gene GCA_005502385.1_00004 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 302 377 . + . GCA_005502385.1_00004_mRNA GCA_005502385.1_00004 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 302 377 . + . GCA_005502385.1_00004 GCA_005502385.1_00004_gene,GCA_005502385.1_00004_mRNA GCA_005502385.1_00004 tRNA-Ala(tgc) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 404 478 . + . GCA_005502385.1_00005_gene GCA_005502385.1_00005 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 404 478 . + . GCA_005502385.1_00005_mRNA GCA_005502385.1_00005 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 404 478 . + . GCA_005502385.1_00005 GCA_005502385.1_00005_gene,GCA_005502385.1_00005_mRNA GCA_005502385.1_00005 tRNA-Met(cat) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 505 580 . + . GCA_005502385.1_00006_gene GCA_005502385.1_00006 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 505 580 . + . GCA_005502385.1_00006_mRNA GCA_005502385.1_00006 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 505 580 . + . GCA_005502385.1_00006 GCA_005502385.1_00006_gene,GCA_005502385.1_00006_mRNA GCA_005502385.1_00006 tRNA-Met(cat) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 588 679 . + . GCA_005502385.1_00007_gene GCA_005502385.1_00007 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 588 679 . + . GCA_005502385.1_00007_mRNA GCA_005502385.1_00007 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 588 679 . + . GCA_005502385.1_00007 GCA_005502385.1_00007_gene,GCA_005502385.1_00007_mRNA GCA_005502385.1_00007 tRNA-Ser(tga) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 684 759 . + . GCA_005502385.1_00008_gene GCA_005502385.1_00008 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 684 759 . + . GCA_005502385.1_00008_mRNA GCA_005502385.1_00008 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 684 759 . + . GCA_005502385.1_00008 GCA_005502385.1_00008_gene,GCA_005502385.1_00008_mRNA GCA_005502385.1_00008 tRNA-Asp(gtc) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 795 887 . + . GCA_005502385.1_00009_gene GCA_005502385.1_00009 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 795 887 . + . GCA_005502385.1_00009_mRNA GCA_005502385.1_00009 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 795 887 . + . GCA_005502385.1_00009 GCA_005502385.1_00009_gene,GCA_005502385.1_00009_mRNA GCA_005502385.1_00009 tRNA-Ser(tga) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 897 972 . + . GCA_005502385.1_00010_gene GCA_005502385.1_00010 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 897 972 . + . GCA_005502385.1_00010_mRNA GCA_005502385.1_00010 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 897 972 . + . GCA_005502385.1_00010 GCA_005502385.1_00010_gene,GCA_005502385.1_00010_mRNA GCA_005502385.1_00010 tRNA-Met(cat) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 980 1055 . + . GCA_005502385.1_00011_gene GCA_005502385.1_00011 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 980 1055 . + . GCA_005502385.1_00011_mRNA GCA_005502385.1_00011 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 980 1055 . + . GCA_005502385.1_00011 GCA_005502385.1_00011_gene,GCA_005502385.1_00011_mRNA GCA_005502385.1_00011 tRNA-Asp(gtc) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 1076 1150 . + . GCA_005502385.1_00012_gene GCA_005502385.1_00012 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 1076 1150 . + . GCA_005502385.1_00012_mRNA GCA_005502385.1_00012 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 1076 1150 . + . GCA_005502385.1_00012 GCA_005502385.1_00012_gene,GCA_005502385.1_00012_mRNA GCA_005502385.1_00012 tRNA-Phe(gaa) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 1156 1231 . + . GCA_005502385.1_00013_gene GCA_005502385.1_00013 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 1156 1231 . + . GCA_005502385.1_00013_mRNA GCA_005502385.1_00013 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 1156 1231 . + . GCA_005502385.1_00013 GCA_005502385.1_00013_gene,GCA_005502385.1_00013_mRNA GCA_005502385.1_00013 tRNA-Thr(tgt) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 1239 1322 . + . GCA_005502385.1_00014_gene GCA_005502385.1_00014 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 1239 1322 . + . GCA_005502385.1_00014_mRNA GCA_005502385.1_00014 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 1239 1322 . + . GCA_005502385.1_00014 GCA_005502385.1_00014_gene,GCA_005502385.1_00014_mRNA GCA_005502385.1_00014 tRNA-Tyr(gta) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 1331 1404 . + . GCA_005502385.1_00015_gene GCA_005502385.1_00015 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 1331 1404 . + . GCA_005502385.1_00015_mRNA GCA_005502385.1_00015 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 1331 1404 . + . GCA_005502385.1_00015 GCA_005502385.1_00015_gene,GCA_005502385.1_00015_mRNA GCA_005502385.1_00015 tRNA-Trp(cca) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 1407 1480 . + . GCA_005502385.1_00016_gene GCA_005502385.1_00016 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 1407 1480 . + . GCA_005502385.1_00016_mRNA GCA_005502385.1_00016 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 1407 1480 . + . GCA_005502385.1_00016 GCA_005502385.1_00016_gene,GCA_005502385.1_00016_mRNA GCA_005502385.1_00016 tRNA-His(gtg) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 1492 1563 . + . GCA_005502385.1_00017_gene GCA_005502385.1_00017 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 1492 1563 . + . GCA_005502385.1_00017_mRNA GCA_005502385.1_00017 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 1492 1563 . + . GCA_005502385.1_00017 GCA_005502385.1_00017_gene,GCA_005502385.1_00017_mRNA GCA_005502385.1_00017 tRNA-Gln(ttg) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 1571 1644 . + . GCA_005502385.1_00018_gene GCA_005502385.1_00018 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 1571 1644 . + . GCA_005502385.1_00018_mRNA GCA_005502385.1_00018 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 1571 1644 . + . GCA_005502385.1_00018 GCA_005502385.1_00018_gene,GCA_005502385.1_00018_mRNA GCA_005502385.1_00018 tRNA-Cys(gca) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 1653 1726 . + . GCA_005502385.1_00019_gene GCA_005502385.1_00019 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 1653 1726 . + . GCA_005502385.1_00019_mRNA GCA_005502385.1_00019 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 1653 1726 . + . GCA_005502385.1_00019 GCA_005502385.1_00019_gene,GCA_005502385.1_00019_mRNA GCA_005502385.1_00019 tRNA-Gly(tcc) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 1741 1815 . + . GCA_005502385.1_00020_gene GCA_005502385.1_00020 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 1741 1815 . + . GCA_005502385.1_00020_mRNA GCA_005502385.1_00020 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 1741 1815 . + . GCA_005502385.1_00020 GCA_005502385.1_00020_gene,GCA_005502385.1_00020_mRNA GCA_005502385.1_00020 tRNA-Gly(tcc) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 1830 1904 . + . GCA_005502385.1_00021_gene GCA_005502385.1_00021 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 1830 1904 . + . GCA_005502385.1_00021_mRNA GCA_005502385.1_00021 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 1830 1904 . + . GCA_005502385.1_00021 GCA_005502385.1_00021_gene,GCA_005502385.1_00021_mRNA GCA_005502385.1_00021 tRNA-Gly(tcc) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 1946 2029 . + . GCA_005502385.1_00022_gene GCA_005502385.1_00022 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 1946 2029 . + . GCA_005502385.1_00022_mRNA GCA_005502385.1_00022 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 1946 2029 . + . GCA_005502385.1_00022 GCA_005502385.1_00022_gene,GCA_005502385.1_00022_mRNA GCA_005502385.1_00022 tRNA-Leu(caa) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 2169 3227 . + . GCA_005502385.1_00023_gene GCA_005502385.1_00023 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSRTRINLKYFFSNILNAVGAGVVIALLPNALLGELLKLFKDQHPILELVFQLVTIIQSFMAFIIGILAAHQFKFSGAGASMIGISAMLGSGAIQMNAKGIALKGIGDIINVILVIIIACALYLLLQGKFGSLEMIILPVFIPVVSGLIGLTTLPYIQIITKNLGHVINSFTEFNPLIMSILISVTFSLLMVTPISLVAIATAISLNGLGSGAANMGIVAACVTFFFGSLRVNSVGVNLVLFIGAAKMMIPVYLKHLIIAIPLTINGIISGLLTYFIGIKGTPLSAGFGYTGLVGPINAFNRMPGDSTFNILLLALGYFIVPFISAFIIHELCKKFIPSYNDNIYRFEITHQ . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 2169 3227 . + . GCA_005502385.1_00023_mRNA GCA_005502385.1_00023 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSRTRINLKYFFSNILNAVGAGVVIALLPNALLGELLKLFKDQHPILELVFQLVTIIQSFMAFIIGILAAHQFKFSGAGASMIGISAMLGSGAIQMNAKGIALKGIGDIINVILVIIIACALYLLLQGKFGSLEMIILPVFIPVVSGLIGLTTLPYIQIITKNLGHVINSFTEFNPLIMSILISVTFSLLMVTPISLVAIATAISLNGLGSGAANMGIVAACVTFFFGSLRVNSVGVNLVLFIGAAKMMIPVYLKHLIIAIPLTINGIISGLLTYFIGIKGTPLSAGFGYTGLVGPINAFNRMPGDSTFNILLLALGYFIVPFISAFIIHELCKKFIPSYNDNIYRFEITHQ . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 2169 3227 . + 0 GCA_005502385.1_00023 GCA_005502385.1_00023_gene,GCA_005502385.1_00023_mRNA GCA_005502385.1_00023 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSRTRINLKYFFSNILNAVGAGVVIALLPNALLGELLKLFKDQHPILELVFQLVTIIQSFMAFIIGILAAHQFKFSGAGASMIGISAMLGSGAIQMNAKGIALKGIGDIINVILVIIIACALYLLLQGKFGSLEMIILPVFIPVVSGLIGLTTLPYIQIITKNLGHVINSFTEFNPLIMSILISVTFSLLMVTPISLVAIATAISLNGLGSGAANMGIVAACVTFFFGSLRVNSVGVNLVLFIGAAKMMIPVYLKHLIIAIPLTINGIISGLLTYFIGIKGTPLSAGFGYTGLVGPINAFNRMPGDSTFNILLLALGYFIVPFISAFIIHELCKKFIPSYNDNIYRFEITHQ persistent 352 Phosphotransferase system EIIC domain-containing protein WP_137689717.1 UPI0010F8EC0A UniRef100_UPI0010F8EC0A,UniRef50_B9DMY0,UniRef90_A0A974KVG5 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 3348 4802 . + . GCA_005502385.1_00024_gene GCA_005502385.1_00024 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKYIFKTMIIAILISLTFINIEPMAHADQDAKWEKIKESGELRVGLSADYAPFEFEKTVKGKSEYAGIDIDLAKKIAKDNHLKLKIVNMQFDSLLGALKTGKIDVIISGMTSTPERKKEVDFSDSYTKTGNVMLIRKSDKNKFHTLKDFSNKKVAAQKGTEQEKIAQQEIENADISSLNRLPDAILAVKSNKVEGLVIEKPVAEAYVKQNNSLMIANVNFNEEKKDNVIAVPKNSPILLANVNKSIKEVNDQHLISKYMDKASKDMQDDSSFFDKYGAFFIKGLKNTILISMIGVVLGAVLGALIALAKLSKFKLLSWIASIYIEFLRGTPMLVQVFLVFFGTTAVLGLDVSALVCGTIALVINSSAYIAEIVRAGINAVDKGQTEAAQCLGLNYSKTMRYIILPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLIIAAIMYFVLTFTLSRGMSLIEGRMKASD . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 3348 4802 . + . GCA_005502385.1_00024_mRNA GCA_005502385.1_00024 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKYIFKTMIIAILISLTFINIEPMAHADQDAKWEKIKESGELRVGLSADYAPFEFEKTVKGKSEYAGIDIDLAKKIAKDNHLKLKIVNMQFDSLLGALKTGKIDVIISGMTSTPERKKEVDFSDSYTKTGNVMLIRKSDKNKFHTLKDFSNKKVAAQKGTEQEKIAQQEIENADISSLNRLPDAILAVKSNKVEGLVIEKPVAEAYVKQNNSLMIANVNFNEEKKDNVIAVPKNSPILLANVNKSIKEVNDQHLISKYMDKASKDMQDDSSFFDKYGAFFIKGLKNTILISMIGVVLGAVLGALIALAKLSKFKLLSWIASIYIEFLRGTPMLVQVFLVFFGTTAVLGLDVSALVCGTIALVINSSAYIAEIVRAGINAVDKGQTEAAQCLGLNYSKTMRYIILPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLIIAAIMYFVLTFTLSRGMSLIEGRMKASD . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 3348 4802 . + 0 GCA_005502385.1_00024 GCA_005502385.1_00024_gene,GCA_005502385.1_00024_mRNA GCA_005502385.1_00024 Membrane-bound lytic murein transglycosylase F GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKYIFKTMIIAILISLTFINIEPMAHADQDAKWEKIKESGELRVGLSADYAPFEFEKTVKGKSEYAGIDIDLAKKIAKDNHLKLKIVNMQFDSLLGALKTGKIDVIISGMTSTPERKKEVDFSDSYTKTGNVMLIRKSDKNKFHTLKDFSNKKVAAQKGTEQEKIAQQEIENADISSLNRLPDAILAVKSNKVEGLVIEKPVAEAYVKQNNSLMIANVNFNEEKKDNVIAVPKNSPILLANVNKSIKEVNDQHLISKYMDKASKDMQDDSSFFDKYGAFFIKGLKNTILISMIGVVLGAVLGALIALAKLSKFKLLSWIASIYIEFLRGTPMLVQVFLVFFGTTAVLGLDVSALVCGTIALVINSSAYIAEIVRAGINAVDKGQTEAAQCLGLNYSKTMRYIILPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLIIAAIMYFVLTFTLSRGMSLIEGRMKASD persistent 484 ABC transporter substrate-binding protein/permease WP_070436372.1 UPI0008A37CCE UniRef100_UPI0008A37CCE,UniRef50_A0A239YWZ0,UniRef90_A0A3S7GWZ2 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 4795 5517 . + . GCA_005502385.1_00025_gene GCA_005502385.1_00025 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MIKVQNLNKSFNKNEVLKDINLEINKGEVVAIIGPSGSGKSTLLRCMNLLETPSNGKVIFEGKELTHKNINLSELRQKMGMVFQNFNLFPHKTVLENVILAPKLLKKVDLKKLEIEGKALLKKVGLEEKANAYPSQLSGGQKQRVAIARALAMHPDVILFDEPTSALDPEVVYEVLKVMKDLAKEGMTMVVVTHEMGFAKDVGDKVIFMADGYVVESETPDQLFNHPKHERTKNFLAKVL . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 4795 5517 . + . GCA_005502385.1_00025_mRNA GCA_005502385.1_00025 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MIKVQNLNKSFNKNEVLKDINLEINKGEVVAIIGPSGSGKSTLLRCMNLLETPSNGKVIFEGKELTHKNINLSELRQKMGMVFQNFNLFPHKTVLENVILAPKLLKKVDLKKLEIEGKALLKKVGLEEKANAYPSQLSGGQKQRVAIARALAMHPDVILFDEPTSALDPEVVYEVLKVMKDLAKEGMTMVVVTHEMGFAKDVGDKVIFMADGYVVESETPDQLFNHPKHERTKNFLAKVL . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 4795 5517 . + 0 GCA_005502385.1_00025 GCA_005502385.1_00025_gene,GCA_005502385.1_00025_mRNA GCA_005502385.1_00025 Arginine transport ATP-binding protein ArtM GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MIKVQNLNKSFNKNEVLKDINLEINKGEVVAIIGPSGSGKSTLLRCMNLLETPSNGKVIFEGKELTHKNINLSELRQKMGMVFQNFNLFPHKTVLENVILAPKLLKKVDLKKLEIEGKALLKKVGLEEKANAYPSQLSGGQKQRVAIARALAMHPDVILFDEPTSALDPEVVYEVLKVMKDLAKEGMTMVVVTHEMGFAKDVGDKVIFMADGYVVESETPDQLFNHPKHERTKNFLAKVL persistent 240 Amino acid ABC transporter ATP-binding protein WP_019835687.1 UPI000371A2BA UniRef100_UPI000AF71A28,UniRef50_E6L0A0,UniRef90_A0A3S7GX47 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 5779 6900 . + . GCA_005502385.1_00026_gene GCA_005502385.1_00026 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNHQLKQEIIDYAYSIGIDSIGFTTADPFDELKQKLVDYHEKGYASGFEESDIALRTEPKLSLPTARSIIAIAVGYPNKLKGAPKSVKGDRRGMFARASWGQDYHSIMKKRLDKLSEFIQSKVPDVEIKSMVDTGVLSDRAVAERAGLGFVGRNGFVINPKLGTWTYLGEMLVSIPFEPDDPILDSCGDCTICVDRCPTGALVGNGQLNSQKCISFLTQTKGYLKDEYRYKIGNRLYGCDTCQQVCPKNRGINTTHEDIILEPEILKPRLVPLLQMSNKEFKNTYGHLAGAWRGKKPIQRNAIIALAHFGEETAIPELKEVALNDPRPMIRGTAYWAIGQILGDDARTFIYEHFDNEIEEVQVEMRKGLEMRK . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 5779 6900 . + . GCA_005502385.1_00026_mRNA GCA_005502385.1_00026 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNHQLKQEIIDYAYSIGIDSIGFTTADPFDELKQKLVDYHEKGYASGFEESDIALRTEPKLSLPTARSIIAIAVGYPNKLKGAPKSVKGDRRGMFARASWGQDYHSIMKKRLDKLSEFIQSKVPDVEIKSMVDTGVLSDRAVAERAGLGFVGRNGFVINPKLGTWTYLGEMLVSIPFEPDDPILDSCGDCTICVDRCPTGALVGNGQLNSQKCISFLTQTKGYLKDEYRYKIGNRLYGCDTCQQVCPKNRGINTTHEDIILEPEILKPRLVPLLQMSNKEFKNTYGHLAGAWRGKKPIQRNAIIALAHFGEETAIPELKEVALNDPRPMIRGTAYWAIGQILGDDARTFIYEHFDNEIEEVQVEMRKGLEMRK . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 5779 6900 . + 0 GCA_005502385.1_00026 GCA_005502385.1_00026_gene,GCA_005502385.1_00026_mRNA GCA_005502385.1_00026 Epoxyqueuosine reductase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNHQLKQEIIDYAYSIGIDSIGFTTADPFDELKQKLVDYHEKGYASGFEESDIALRTEPKLSLPTARSIIAIAVGYPNKLKGAPKSVKGDRRGMFARASWGQDYHSIMKKRLDKLSEFIQSKVPDVEIKSMVDTGVLSDRAVAERAGLGFVGRNGFVINPKLGTWTYLGEMLVSIPFEPDDPILDSCGDCTICVDRCPTGALVGNGQLNSQKCISFLTQTKGYLKDEYRYKIGNRLYGCDTCQQVCPKNRGINTTHEDIILEPEILKPRLVPLLQMSNKEFKNTYGHLAGAWRGKKPIQRNAIIALAHFGEETAIPELKEVALNDPRPMIRGTAYWAIGQILGDDARTFIYEHFDNEIEEVQVEMRKGLEMRK persistent 373 queG tRNA epoxyqueuosine(34) reductase QueG 1.17.99.6 GO:0008033,GO:0008616,GO:0051539,GO:0052693 WP_019835688.1 UPI000360371B UniRef100_UPI000360371B,UniRef50_P97030,UniRef90_A0A3S7H086 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 6903 7373 . + . GCA_005502385.1_00027_gene GCA_005502385.1_00027 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTNHIVLFQPEIPANTGNIARTCAGTNTHLHLIKPLGFSTDDKMLKRAGLDYWEHVNITYHENIESFFEVTNGKYYLLTKFGKQTYSDFDFSNTEVENYFIFGRETTGLPDWVKEKYADTALRIPMSDHIRSLNLSNTAALLIYEALRQQNFPGLK . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 6903 7373 . + . GCA_005502385.1_00027_mRNA GCA_005502385.1_00027 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTNHIVLFQPEIPANTGNIARTCAGTNTHLHLIKPLGFSTDDKMLKRAGLDYWEHVNITYHENIESFFEVTNGKYYLLTKFGKQTYSDFDFSNTEVENYFIFGRETTGLPDWVKEKYADTALRIPMSDHIRSLNLSNTAALLIYEALRQQNFPGLK . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 6903 7373 . + 0 GCA_005502385.1_00027 GCA_005502385.1_00027_gene,GCA_005502385.1_00027_mRNA GCA_005502385.1_00027 tRNA (cytidine(34)-2'-O)-methyltransferase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTNHIVLFQPEIPANTGNIARTCAGTNTHLHLIKPLGFSTDDKMLKRAGLDYWEHVNITYHENIESFFEVTNGKYYLLTKFGKQTYSDFDFSNTEVENYFIFGRETTGLPDWVKEKYADTALRIPMSDHIRSLNLSNTAALLIYEALRQQNFPGLK persistent 156 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL 2.1.1.207 GO:0006400,GO:0008175 WP_017176401.1 UPI000304A746 UniRef100_A0A4Q9WNE7,UniRef50_A0A356K312,UniRef90_A0A364UN37 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 7533 8132 . + . GCA_005502385.1_00028_gene GCA_005502385.1_00028 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MAMNFKVFEDKQHAADYAGDIIRKQFNNNPTTIAGFHLNKDSAPVLDELKKSVDRNAVDFSQINILDYDDNHSFYEALGVPSEQVYSISLDDDAESLINDRIKTKENKGKLTLQVVSIDNSGHLDVNIRQGLMKAREIILVVTGAEKSEVIKRLYEENGKSNFLPADLKVHRMVTVVLDRAAADGLPEDVKEYFTARFA . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 7533 8132 . + . GCA_005502385.1_00028_mRNA GCA_005502385.1_00028 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MAMNFKVFEDKQHAADYAGDIIRKQFNNNPTTIAGFHLNKDSAPVLDELKKSVDRNAVDFSQINILDYDDNHSFYEALGVPSEQVYSISLDDDAESLINDRIKTKENKGKLTLQVVSIDNSGHLDVNIRQGLMKAREIILVVTGAEKSEVIKRLYEENGKSNFLPADLKVHRMVTVVLDRAAADGLPEDVKEYFTARFA . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 7533 8132 . + 0 GCA_005502385.1_00028 GCA_005502385.1_00028_gene,GCA_005502385.1_00028_mRNA GCA_005502385.1_00028 Glucosamine-6-phosphate deaminase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MAMNFKVFEDKQHAADYAGDIIRKQFNNNPTTIAGFHLNKDSAPVLDELKKSVDRNAVDFSQINILDYDDNHSFYEALGVPSEQVYSISLDDDAESLINDRIKTKENKGKLTLQVVSIDNSGHLDVNIRQGLMKAREIILVVTGAEKSEVIKRLYEENGKSNFLPADLKVHRMVTVVLDRAAADGLPEDVKEYFTARFA persistent 199 Glucosamine-6-phosphate isomerase WP_017176400.1 UPI0002EB3E3C UniRef100_A0A4Q9WMK1,UniRef50_Q2FX90,UniRef90_A0A4Q9WMK1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 8161 8328 . + . GCA_005502385.1_00029_gene GCA_005502385.1_00029 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSKDSKRNYHEDENAMVQNMDDLEALGKEMEQISEENDEDKYNQTHDSEARSDLN . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 8161 8328 . + . GCA_005502385.1_00029_mRNA GCA_005502385.1_00029 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSKDSKRNYHEDENAMVQNMDDLEALGKEMEQISEENDEDKYNQTHDSEARSDLN . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 8161 8328 . + 0 GCA_005502385.1_00029 GCA_005502385.1_00029_gene,GCA_005502385.1_00029_mRNA GCA_005502385.1_00029 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSKDSKRNYHEDENAMVQNMDDLEALGKEMEQISEENDEDKYNQTHDSEARSDLN persistent 55 SAS053 family DNA gyrase inhibitor GO:0090729 WP_017176399.1 UPI0002E6F091 UniRef100_A0A8X8GQJ4,UniRef50_Q2FX91,UniRef90_A0A657ZR35 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 8439 8831 . + . GCA_005502385.1_00030_gene GCA_005502385.1_00030 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MLHKYWLPLTIITIIVSLISIKGFPIALGALYLPVLFKVIQLQLNLSKDLIDNATAHPFIKSNQKGIMISVICILIVTGILAYTLNDFYRSLGGVLGMLVKISPVTLVISAILYIISAISVVKAVKYKYE . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 8439 8831 . + . GCA_005502385.1_00030_mRNA GCA_005502385.1_00030 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MLHKYWLPLTIITIIVSLISIKGFPIALGALYLPVLFKVIQLQLNLSKDLIDNATAHPFIKSNQKGIMISVICILIVTGILAYTLNDFYRSLGGVLGMLVKISPVTLVISAILYIISAISVVKAVKYKYE . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 8439 8831 . + 0 GCA_005502385.1_00030 GCA_005502385.1_00030_gene,GCA_005502385.1_00030_mRNA GCA_005502385.1_00030 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MLHKYWLPLTIITIIVSLISIKGFPIALGALYLPVLFKVIQLQLNLSKDLIDNATAHPFIKSNQKGIMISVICILIVTGILAYTLNDFYRSLGGVLGMLVKISPVTLVISAILYIISAISVVKAVKYKYE persistent 130 DUF2975 domain-containing protein WP_017176398.1 UPI0002D757AA UniRef100_A0A4Q9WMH6,UniRef50_Q2FX93,UniRef90_A0A974KVY0 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 8971 10356 . + . GCA_005502385.1_00031_gene GCA_005502385.1_00031 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSVRIEHDTFGEIEVPSDKYWGAQTERSKRNFPVGKEHMPIEVIYGFAQLKRGAALANHELGKLSDTKKDAIIYACDLILKGELDGHFPLVVWQTGSGTQSNMNVNEVVSYVANEYLKEHNSDESIHPNDDVNKSQSSNDTFPTAMHVALYHEIETKLEPALKHLRDTFKEKENQYQSIIKIGRTHLQDATPIRLGQEISGWRYMLDKCEQLLAESKQHILNLAIGGTAVGTGINAHPEFGDKVAKYISEHTGYAFVSSENKFHALTSHDEVVQLHGTLKALAADLMKIANDIRWLASGPRAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMVAVQVIGNDTTVGIASSQGNFELNVFKPVILHNTLQSIYLLADGMETFNKNCAIGIEPIEENINHYLNQSLMLVTALNPHIGYEKAAQIAKKAHNEGLTLKESAINSGYVTEEQFEEWIKPEDMVDPH . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 8971 10356 . + . GCA_005502385.1_00031_mRNA GCA_005502385.1_00031 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSVRIEHDTFGEIEVPSDKYWGAQTERSKRNFPVGKEHMPIEVIYGFAQLKRGAALANHELGKLSDTKKDAIIYACDLILKGELDGHFPLVVWQTGSGTQSNMNVNEVVSYVANEYLKEHNSDESIHPNDDVNKSQSSNDTFPTAMHVALYHEIETKLEPALKHLRDTFKEKENQYQSIIKIGRTHLQDATPIRLGQEISGWRYMLDKCEQLLAESKQHILNLAIGGTAVGTGINAHPEFGDKVAKYISEHTGYAFVSSENKFHALTSHDEVVQLHGTLKALAADLMKIANDIRWLASGPRAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMVAVQVIGNDTTVGIASSQGNFELNVFKPVILHNTLQSIYLLADGMETFNKNCAIGIEPIEENINHYLNQSLMLVTALNPHIGYEKAAQIAKKAHNEGLTLKESAINSGYVTEEQFEEWIKPEDMVDPH . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 8971 10356 . + 0 GCA_005502385.1_00031 GCA_005502385.1_00031_gene,GCA_005502385.1_00031_mRNA GCA_005502385.1_00031 Fumarate hydratase class II GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSVRIEHDTFGEIEVPSDKYWGAQTERSKRNFPVGKEHMPIEVIYGFAQLKRGAALANHELGKLSDTKKDAIIYACDLILKGELDGHFPLVVWQTGSGTQSNMNVNEVVSYVANEYLKEHNSDESIHPNDDVNKSQSSNDTFPTAMHVALYHEIETKLEPALKHLRDTFKEKENQYQSIIKIGRTHLQDATPIRLGQEISGWRYMLDKCEQLLAESKQHILNLAIGGTAVGTGINAHPEFGDKVAKYISEHTGYAFVSSENKFHALTSHDEVVQLHGTLKALAADLMKIANDIRWLASGPRAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMVAVQVIGNDTTVGIASSQGNFELNVFKPVILHNTLQSIYLLADGMETFNKNCAIGIEPIEENINHYLNQSLMLVTALNPHIGYEKAAQIAKKAHNEGLTLKESAINSGYVTEEQFEEWIKPEDMVDPH persistent 461 fumC class II fumarate hydratase 4.2.1.2 GO:0004333,GO:0005737,GO:0006099,GO:0006106,GO:0006108,GO:0045239 C,COG0114 WP_017176397.1 UPI0002FAD836 UniRef100_A0A4Q9WMH2,UniRef50_P64172,UniRef90_Q5HN85 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 10435 11259 . - . GCA_005502385.1_00032_gene GCA_005502385.1_00032 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKFNVPETFNNYTLREIFQKLKLPKKDLHQLNMSKDITINQQPSKLTDKVVTNDVVYIPIPEEKSNYLPSYRYAQIAYEDNDLAIVMKPKGVKTHPNDLKESNTLMNHVIYTMDSDYVEPIHRLDQETVGLLIVAKNPLMKKILDRMLEENQITRIYRANVKALLPLKPQTIDMPIGKDKFHPNKRRISNTGQRAITHILTSKMIKEGICQLEIKLDTGRTHQIRVHLAEIGHPVIGDPLYGDATLRQLELNSYKIEFTHPLTQELISVSLDDE . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 10435 11259 . - . GCA_005502385.1_00032_mRNA GCA_005502385.1_00032 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKFNVPETFNNYTLREIFQKLKLPKKDLHQLNMSKDITINQQPSKLTDKVVTNDVVYIPIPEEKSNYLPSYRYAQIAYEDNDLAIVMKPKGVKTHPNDLKESNTLMNHVIYTMDSDYVEPIHRLDQETVGLLIVAKNPLMKKILDRMLEENQITRIYRANVKALLPLKPQTIDMPIGKDKFHPNKRRISNTGQRAITHILTSKMIKEGICQLEIKLDTGRTHQIRVHLAEIGHPVIGDPLYGDATLRQLELNSYKIEFTHPLTQELISVSLDDE . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 10435 11259 . - 0 GCA_005502385.1_00032 GCA_005502385.1_00032_gene,GCA_005502385.1_00032_mRNA GCA_005502385.1_00032 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKFNVPETFNNYTLREIFQKLKLPKKDLHQLNMSKDITINQQPSKLTDKVVTNDVVYIPIPEEKSNYLPSYRYAQIAYEDNDLAIVMKPKGVKTHPNDLKESNTLMNHVIYTMDSDYVEPIHRLDQETVGLLIVAKNPLMKKILDRMLEENQITRIYRANVKALLPLKPQTIDMPIGKDKFHPNKRRISNTGQRAITHILTSKMIKEGICQLEIKLDTGRTHQIRVHLAEIGHPVIGDPLYGDATLRQLELNSYKIEFTHPLTQELISVSLDDE persistent 274 Pseudouridine synthase WP_019835689.1 UPI00036F3C20 UniRef100_UPI00036F3C20,UniRef50_A0A239YUZ3,UniRef90_A0A3S7GXJ3 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 11397 12506 . + . GCA_005502385.1_00033_gene GCA_005502385.1_00033 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MEKPTRLALLKEIAEYLNEETELYNMMNKVLDYLINGSSFTTGWIFLINKKGEQELVASTNLPHSLKNNNCKYLNNGTCWCVNAYHHKNLTKASNIINCSRINLANQESEKDDYLITHHATVPLRSGDEQYGLLNVATPHTVVYSQDDLELLESVALQIGSAIKRIYLTDQEKEAARISERNRLARDLHDSVNQMLFSLKLTAHAAHDITEDKTAKKAFKMIEDTSQNAVNEMRALIWQLKPIGLEHGLVNAIQHYANMLDLKLNIEVRGLIKLSNLVEENVYRMLQEALNNTKKHAQTNQVSINMQQNEHQLYIKIYDDGKGFNVSDDLNQTTHGLKNIKQRIHSLDGEFNIQSDKQMGTTIYLNIPI . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 11397 12506 . + . GCA_005502385.1_00033_mRNA GCA_005502385.1_00033 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MEKPTRLALLKEIAEYLNEETELYNMMNKVLDYLINGSSFTTGWIFLINKKGEQELVASTNLPHSLKNNNCKYLNNGTCWCVNAYHHKNLTKASNIINCSRINLANQESEKDDYLITHHATVPLRSGDEQYGLLNVATPHTVVYSQDDLELLESVALQIGSAIKRIYLTDQEKEAARISERNRLARDLHDSVNQMLFSLKLTAHAAHDITEDKTAKKAFKMIEDTSQNAVNEMRALIWQLKPIGLEHGLVNAIQHYANMLDLKLNIEVRGLIKLSNLVEENVYRMLQEALNNTKKHAQTNQVSINMQQNEHQLYIKIYDDGKGFNVSDDLNQTTHGLKNIKQRIHSLDGEFNIQSDKQMGTTIYLNIPI . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 11397 12506 . + 0 GCA_005502385.1_00033 GCA_005502385.1_00033_gene,GCA_005502385.1_00033_mRNA GCA_005502385.1_00033 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MEKPTRLALLKEIAEYLNEETELYNMMNKVLDYLINGSSFTTGWIFLINKKGEQELVASTNLPHSLKNNNCKYLNNGTCWCVNAYHHKNLTKASNIINCSRINLANQESEKDDYLITHHATVPLRSGDEQYGLLNVATPHTVVYSQDDLELLESVALQIGSAIKRIYLTDQEKEAARISERNRLARDLHDSVNQMLFSLKLTAHAAHDITEDKTAKKAFKMIEDTSQNAVNEMRALIWQLKPIGLEHGLVNAIQHYANMLDLKLNIEVRGLIKLSNLVEENVYRMLQEALNNTKKHAQTNQVSINMQQNEHQLYIKIYDDGKGFNVSDDLNQTTHGLKNIKQRIHSLDGEFNIQSDKQMGTTIYLNIPI persistent 369 histidine kinase UniRef50_A0A380G577,UniRef90_A0A3S7GZT0 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 12521 13144 . + . GCA_005502385.1_00034_gene GCA_005502385.1_00034 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MASIVLIDDHHIVRQGLEFLISTVEGLDIQASFSDGDAFIKYLNENNMPDLVLLDLVMPKMNGIEVTHYIKKYYPYIKVLVLTSYVDDEYVMSAINEGADGYEIKDVEPQKLIATITKVLNNEKIIHPKAKNVIDAMHEKPHFNNKLSKREMEVLKEMVKGKTNKDIAKSLFVSEKTVKTHVSHIFNKLQVSDRTQAAIYAIENKLI . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 12521 13144 . + . GCA_005502385.1_00034_mRNA GCA_005502385.1_00034 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MASIVLIDDHHIVRQGLEFLISTVEGLDIQASFSDGDAFIKYLNENNMPDLVLLDLVMPKMNGIEVTHYIKKYYPYIKVLVLTSYVDDEYVMSAINEGADGYEIKDVEPQKLIATITKVLNNEKIIHPKAKNVIDAMHEKPHFNNKLSKREMEVLKEMVKGKTNKDIAKSLFVSEKTVKTHVSHIFNKLQVSDRTQAAIYAIENKLI . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 12521 13144 . + 0 GCA_005502385.1_00034 GCA_005502385.1_00034_gene,GCA_005502385.1_00034_mRNA GCA_005502385.1_00034 Response regulator protein VraR GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MASIVLIDDHHIVRQGLEFLISTVEGLDIQASFSDGDAFIKYLNENNMPDLVLLDLVMPKMNGIEVTHYIKKYYPYIKVLVLTSYVDDEYVMSAINEGADGYEIKDVEPQKLIATITKVLNNEKIIHPKAKNVIDAMHEKPHFNNKLSKREMEVLKEMVKGKTNKDIAKSLFVSEKTVKTHVSHIFNKLQVSDRTQAAIYAIENKLI persistent 207 DNA-binding response regulator WP_017176394.1 UPI0002D4726C UniRef100_A0A4Q9WQY1,UniRef50_S2XG46,UniRef90_A0AAE5MYL6 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 13394 13858 . + . GCA_005502385.1_00035_gene GCA_005502385.1_00035 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MDRQSFTDLIQTKFKMVRIEAGYTQDTMAQTIGLSKKTLVQIEKERVLPNWTTCVSICALFRDSDVLNNTFGCDPLEIVQTISRNHCAYPNHSTTSDIYWNTMETRNGFILQSNKVSNIYRVLNPEKQPIFGTSKLREAETYFNRNAKEELMHV . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 13394 13858 . + . GCA_005502385.1_00035_mRNA GCA_005502385.1_00035 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MDRQSFTDLIQTKFKMVRIEAGYTQDTMAQTIGLSKKTLVQIEKERVLPNWTTCVSICALFRDSDVLNNTFGCDPLEIVQTISRNHCAYPNHSTTSDIYWNTMETRNGFILQSNKVSNIYRVLNPEKQPIFGTSKLREAETYFNRNAKEELMHV . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 13394 13858 . + 0 GCA_005502385.1_00035 GCA_005502385.1_00035_gene,GCA_005502385.1_00035_mRNA GCA_005502385.1_00035 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MDRQSFTDLIQTKFKMVRIEAGYTQDTMAQTIGLSKKTLVQIEKERVLPNWTTCVSICALFRDSDVLNNTFGCDPLEIVQTISRNHCAYPNHSTTSDIYWNTMETRNGFILQSNKVSNIYRVLNPEKQPIFGTSKLREAETYFNRNAKEELMHV persistent 154 xRE HTH cro/C1-type domain-containing protein COG1476,K WP_002449642.1 UPI00019FCD8C UniRef100_A0A1L8Y6E4,UniRef50_Q2FX98,UniRef90_Q2FX98 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 14079 15209 . + . GCA_005502385.1_00036_gene GCA_005502385.1_00036 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MQAVLVVIFMIVIGAIIGGVTNVIAIRMLFHPYKAHYIFNMRIPFTPGLIPKRRDEIATKIGQVIEEHLITETLIHNKLNETKTKETINELVKEQIAKLKSDQATIRYFAEKFDVKIDYLVNEKLEDTISQKLLAFYNEHRNEEVIKLLPKETKRMIDKKVEPLGDLLCERARVYLSSDKGARDIYDMLDTFFNEKGKIVGLLQMFMTKESIADRIQHELIRLTNHPKAKRIVNQVIDNEYETLKRQSLKKIIDEAQFSKLSDSVTLLITSYLNLNEKIDKPLNQLSPRLMQYLETTLSDKVTQLIISQASKHLSTIMQKINLRKLVEDQINTFDLDYIEKLIIEIANKELKLITLLGFILGGMIGLFQGLIAIFV . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 14079 15209 . + . GCA_005502385.1_00036_mRNA GCA_005502385.1_00036 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MQAVLVVIFMIVIGAIIGGVTNVIAIRMLFHPYKAHYIFNMRIPFTPGLIPKRRDEIATKIGQVIEEHLITETLIHNKLNETKTKETINELVKEQIAKLKSDQATIRYFAEKFDVKIDYLVNEKLEDTISQKLLAFYNEHRNEEVIKLLPKETKRMIDKKVEPLGDLLCERARVYLSSDKGARDIYDMLDTFFNEKGKIVGLLQMFMTKESIADRIQHELIRLTNHPKAKRIVNQVIDNEYETLKRQSLKKIIDEAQFSKLSDSVTLLITSYLNLNEKIDKPLNQLSPRLMQYLETTLSDKVTQLIISQASKHLSTIMQKINLRKLVEDQINTFDLDYIEKLIIEIANKELKLITLLGFILGGMIGLFQGLIAIFV . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 14079 15209 . + 0 GCA_005502385.1_00036 GCA_005502385.1_00036_gene,GCA_005502385.1_00036_mRNA GCA_005502385.1_00036 hypothetical protein UPF0754 membrane protein SA1664 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MQAVLVVIFMIVIGAIIGGVTNVIAIRMLFHPYKAHYIFNMRIPFTPGLIPKRRDEIATKIGQVIEEHLITETLIHNKLNETKTKETINELVKEQIAKLKSDQATIRYFAEKFDVKIDYLVNEKLEDTISQKLLAFYNEHRNEEVIKLLPKETKRMIDKKVEPLGDLLCERARVYLSSDKGARDIYDMLDTFFNEKGKIVGLLQMFMTKESIADRIQHELIRLTNHPKAKRIVNQVIDNEYETLKRQSLKKIIDEAQFSKLSDSVTLLITSYLNLNEKIDKPLNQLSPRLMQYLETTLSDKVTQLIISQASKHLSTIMQKINLRKLVEDQINTFDLDYIEKLIIEIANKELKLITLLGFILGGMIGLFQGLIAIFV persistent 376 DUF445 domain-containing protein WP_017176393.1 UPI00030C9B1B UniRef100_A0A4Q9WNM4,UniRef50_Q2FX99,UniRef90_A0AAE5MYS9 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 15281 15625 . + . GCA_005502385.1_00037_gene GCA_005502385.1_00037 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MAVNLYDYANQLEQALRDSDEYKAIKDAFAKVKENEESKKLFDEFRETQMNFQQKQMQGQEIPEEELAKAQEQAQAIEKDENISQLMQAEQKMSQVFQEINQIIVKPLDEIYVD . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 15281 15625 . + . GCA_005502385.1_00037_mRNA GCA_005502385.1_00037 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MAVNLYDYANQLEQALRDSDEYKAIKDAFAKVKENEESKKLFDEFRETQMNFQQKQMQGQEIPEEELAKAQEQAQAIEKDENISQLMQAEQKMSQVFQEINQIIVKPLDEIYVD . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 15281 15625 . + 0 GCA_005502385.1_00037 GCA_005502385.1_00037_gene,GCA_005502385.1_00037_mRNA GCA_005502385.1_00037 hypothetical protein UPF0342 protein SA1663 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MAVNLYDYANQLEQALRDSDEYKAIKDAFAKVKENEESKKLFDEFRETQMNFQQKQMQGQEIPEEELAKAQEQAQAIEKDENISQLMQAEQKMSQVFQEINQIIVKPLDEIYVD persistent 114 ylbF YlbF/YmcA family competence regulator COG3679,T WP_017176392.1 UPI00030EF841 UniRef100_A0A4Q9WND9,UniRef50_Q2FXA0,UniRef90_Q5HN91 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 15776 16972 . + . GCA_005502385.1_00038_gene GCA_005502385.1_00038 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MVKFIHCADLHLDSPFKSKQQLSTSIFKDVQKSAYESFKKIVDVALKEDVDFMLIVGDLFDSENRTLRAEIFLKEQFKRLEKEQIFVYICHGNHDPLTTRITDNWPNNVSVFSNRVETYQAITKAGEQIYIHGFSYQNNTSYENKIDEYPSSQGSNGIHIGMLHGTYSKSNIKQRYTEFMLEDLNHKLYHYWALGHIHQRQELSDMPPIHYSGNIQGRHFGELGTKGCLLVEGDHLHLETTFIPTQFIRFEEATIKTDKISKQGIYEEIQKFKKQVREQGKAFYRLTINIDNDKILSTQDILQIREMISEYEENEHDFIVIEDMILNYIQNEETPLINEFSNELINDDKVFEEAMTDLYLNPRASKYLEDYTTFNKAKLIHRAEKILKADMRGEEIDY . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 15776 16972 . + . GCA_005502385.1_00038_mRNA GCA_005502385.1_00038 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MVKFIHCADLHLDSPFKSKQQLSTSIFKDVQKSAYESFKKIVDVALKEDVDFMLIVGDLFDSENRTLRAEIFLKEQFKRLEKEQIFVYICHGNHDPLTTRITDNWPNNVSVFSNRVETYQAITKAGEQIYIHGFSYQNNTSYENKIDEYPSSQGSNGIHIGMLHGTYSKSNIKQRYTEFMLEDLNHKLYHYWALGHIHQRQELSDMPPIHYSGNIQGRHFGELGTKGCLLVEGDHLHLETTFIPTQFIRFEEATIKTDKISKQGIYEEIQKFKKQVREQGKAFYRLTINIDNDKILSTQDILQIREMISEYEENEHDFIVIEDMILNYIQNEETPLINEFSNELINDDKVFEEAMTDLYLNPRASKYLEDYTTFNKAKLIHRAEKILKADMRGEEIDY . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 15776 16972 . + 0 GCA_005502385.1_00038 GCA_005502385.1_00038_gene,GCA_005502385.1_00038_mRNA GCA_005502385.1_00038 hypothetical protein """""" GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MVKFIHCADLHLDSPFKSKQQLSTSIFKDVQKSAYESFKKIVDVALKEDVDFMLIVGDLFDSENRTLRAEIFLKEQFKRLEKEQIFVYICHGNHDPLTTRITDNWPNNVSVFSNRVETYQAITKAGEQIYIHGFSYQNNTSYENKIDEYPSSQGSNGIHIGMLHGTYSKSNIKQRYTEFMLEDLNHKLYHYWALGHIHQRQELSDMPPIHYSGNIQGRHFGELGTKGCLLVEGDHLHLETTFIPTQFIRFEEATIKTDKISKQGIYEEIQKFKKQVREQGKAFYRLTINIDNDKILSTQDILQIREMISEYEENEHDFIVIEDMILNYIQNEETPLINEFSNELINDDKVFEEAMTDLYLNPRASKYLEDYTTFNKAKLIHRAEKILKADMRGEEIDY persistent 398 DNA repair exonuclease WP_017176391.1 UPI0002F5481D UniRef100_A0A8X8KFW2,UniRef50_Q2G2S7,UniRef90_A0AAE5JKI4 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 16962 19898 . + . GCA_005502385.1_00039_gene GCA_005502385.1_00039 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MIIKSLEIYGYGQFVQRKIELNQTFTEIYGENEAGKSTIQSFIHSILFGFPTKKEKEPRLEPRLGNQYGGKLTLILDDKSEIEVERVKGSAQGDVKVYLENGLIRDEAWLKKKLNYISKKTYQGIFSFNVLGLQDIHRNLDEQQLQSYLLEAGALGSSEFTSMGQIVNQKKTTLYKKAGKNPILNQQIEELKQLEAQIRDEETKLDEYQRLIDEKDKSERHLSHLKENLKQLSKMHENKQKQLGLHAHAQEWKSLEHHLNIEPLKFPEQGIERYETALKYKQSLDRDIGLRDEKIRQLENEFNLIQMPDDRTVSDMYHLYQQESDIKQSELKAKALKKEIETFERSQQTLKDDIGWNEVYHEADTSETMKDYISEKIKNHNHQLNQKQQVERMIGEHNIEKKEIEKEIKLLESELVSETALEKKKEYNQQKIELHEKESLYSKLKASFESEKERKQKQYQWLKISFIILALMSAGLTIFAFITTSITFSIIFAILTVIFIVGLFFSKNKDIDYSETISEEISDLEQQLKALEDKYDLDFNLDDQYQLRERWNNANNTKSVISNKLNHQHSILSDIQSSIDALAQDISEIKQDIKVSDKMSDERLVDSLKTMNQLKVNDKQLNKLLLENIELNQNLINFYEHAQDVTKDSFDEFNKISLFNDLKGWISQYESKKEKKSQLQNQLTLLSKELKQLESRLDENKTTINELFKYIEVQNEEQYYQHYEAYQRYQQQLSRFNDLSTYLSNHEFSYEDSSVLSEKTTAQLEEEDQMLAQQVDDYNDKYLEKQTEVSELSARINQMETDKTLSQLRHQYYNLKNRMNDIAKDWASLSYLETLINEHIKQIKDKRLPYVIDEAINIFKTLTDGKYNLITYENDSIKVKHRNGQMYHPLELSQSTKELLYISLRLSLIKVLKPYYPFPIIIDDAFVHFDKQRKSMMLNYLRELSQEHQVLYFTCTKDTTIPSREMLILNKKEEGGKR . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 16962 19898 . + . GCA_005502385.1_00039_mRNA GCA_005502385.1_00039 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MIIKSLEIYGYGQFVQRKIELNQTFTEIYGENEAGKSTIQSFIHSILFGFPTKKEKEPRLEPRLGNQYGGKLTLILDDKSEIEVERVKGSAQGDVKVYLENGLIRDEAWLKKKLNYISKKTYQGIFSFNVLGLQDIHRNLDEQQLQSYLLEAGALGSSEFTSMGQIVNQKKTTLYKKAGKNPILNQQIEELKQLEAQIRDEETKLDEYQRLIDEKDKSERHLSHLKENLKQLSKMHENKQKQLGLHAHAQEWKSLEHHLNIEPLKFPEQGIERYETALKYKQSLDRDIGLRDEKIRQLENEFNLIQMPDDRTVSDMYHLYQQESDIKQSELKAKALKKEIETFERSQQTLKDDIGWNEVYHEADTSETMKDYISEKIKNHNHQLNQKQQVERMIGEHNIEKKEIEKEIKLLESELVSETALEKKKEYNQQKIELHEKESLYSKLKASFESEKERKQKQYQWLKISFIILALMSAGLTIFAFITTSITFSIIFAILTVIFIVGLFFSKNKDIDYSETISEEISDLEQQLKALEDKYDLDFNLDDQYQLRERWNNANNTKSVISNKLNHQHSILSDIQSSIDALAQDISEIKQDIKVSDKMSDERLVDSLKTMNQLKVNDKQLNKLLLENIELNQNLINFYEHAQDVTKDSFDEFNKISLFNDLKGWISQYESKKEKKSQLQNQLTLLSKELKQLESRLDENKTTINELFKYIEVQNEEQYYQHYEAYQRYQQQLSRFNDLSTYLSNHEFSYEDSSVLSEKTTAQLEEEDQMLAQQVDDYNDKYLEKQTEVSELSARINQMETDKTLSQLRHQYYNLKNRMNDIAKDWASLSYLETLINEHIKQIKDKRLPYVIDEAINIFKTLTDGKYNLITYENDSIKVKHRNGQMYHPLELSQSTKELLYISLRLSLIKVLKPYYPFPIIIDDAFVHFDKQRKSMMLNYLRELSQEHQVLYFTCTKDTTIPSREMLILNKKEEGGKR . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 16962 19898 . + 0 GCA_005502385.1_00039 GCA_005502385.1_00039_gene,GCA_005502385.1_00039_mRNA GCA_005502385.1_00039 hypothetical protein """""" GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MIIKSLEIYGYGQFVQRKIELNQTFTEIYGENEAGKSTIQSFIHSILFGFPTKKEKEPRLEPRLGNQYGGKLTLILDDKSEIEVERVKGSAQGDVKVYLENGLIRDEAWLKKKLNYISKKTYQGIFSFNVLGLQDIHRNLDEQQLQSYLLEAGALGSSEFTSMGQIVNQKKTTLYKKAGKNPILNQQIEELKQLEAQIRDEETKLDEYQRLIDEKDKSERHLSHLKENLKQLSKMHENKQKQLGLHAHAQEWKSLEHHLNIEPLKFPEQGIERYETALKYKQSLDRDIGLRDEKIRQLENEFNLIQMPDDRTVSDMYHLYQQESDIKQSELKAKALKKEIETFERSQQTLKDDIGWNEVYHEADTSETMKDYISEKIKNHNHQLNQKQQVERMIGEHNIEKKEIEKEIKLLESELVSETALEKKKEYNQQKIELHEKESLYSKLKASFESEKERKQKQYQWLKISFIILALMSAGLTIFAFITTSITFSIIFAILTVIFIVGLFFSKNKDIDYSETISEEISDLEQQLKALEDKYDLDFNLDDQYQLRERWNNANNTKSVISNKLNHQHSILSDIQSSIDALAQDISEIKQDIKVSDKMSDERLVDSLKTMNQLKVNDKQLNKLLLENIELNQNLINFYEHAQDVTKDSFDEFNKISLFNDLKGWISQYESKKEKKSQLQNQLTLLSKELKQLESRLDENKTTINELFKYIEVQNEEQYYQHYEAYQRYQQQLSRFNDLSTYLSNHEFSYEDSSVLSEKTTAQLEEEDQMLAQQVDDYNDKYLEKQTEVSELSARINQMETDKTLSQLRHQYYNLKNRMNDIAKDWASLSYLETLINEHIKQIKDKRLPYVIDEAINIFKTLTDGKYNLITYENDSIKVKHRNGQMYHPLELSQSTKELLYISLRLSLIKVLKPYYPFPIIIDDAFVHFDKQRKSMMLNYLRELSQEHQVLYFTCTKDTTIPSREMLILNKKEEGGKR persistent 978 AAA family ATPase UniRef50_B9DMY3,UniRef90_A0A3S7GXK6 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 19895 20836 . + . GCA_005502385.1_00040_gene GCA_005502385.1_00040 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MRNVEKLNPGDSVENFFLIHRATQGVTAQGKDYMTLYLQDKSGDIEAKLWTVTKDDMKILKPEIIVWVKGDVINYRGRKQMKVNQFRLATAEDGVKTQDFVDGAPLSPNEIQDELSHFILEIENAHLQRITRHLLKKYQDKFFTYPAASSHHHNFAGGLSYHVLTMLKIAKSLCDIYPLLNRSLLYSAIILHDIGKVRELSGPVATTYTVEGNLLGHISIASDEVAETAKELGIDSEEVMLLRHMILAHHGKMEFGSPKLPHLKEAEILFFIDNIDAKMNMFDKAFKKTEKGQFTERIFGMDNRQFYNPEKLD . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 19895 20836 . + . GCA_005502385.1_00040_mRNA GCA_005502385.1_00040 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MRNVEKLNPGDSVENFFLIHRATQGVTAQGKDYMTLYLQDKSGDIEAKLWTVTKDDMKILKPEIIVWVKGDVINYRGRKQMKVNQFRLATAEDGVKTQDFVDGAPLSPNEIQDELSHFILEIENAHLQRITRHLLKKYQDKFFTYPAASSHHHNFAGGLSYHVLTMLKIAKSLCDIYPLLNRSLLYSAIILHDIGKVRELSGPVATTYTVEGNLLGHISIASDEVAETAKELGIDSEEVMLLRHMILAHHGKMEFGSPKLPHLKEAEILFFIDNIDAKMNMFDKAFKKTEKGQFTERIFGMDNRQFYNPEKLD . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 19895 20836 . + 0 GCA_005502385.1_00040 GCA_005502385.1_00040_gene,GCA_005502385.1_00040_mRNA GCA_005502385.1_00040 3'-5' exoribonuclease YhaM GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MRNVEKLNPGDSVENFFLIHRATQGVTAQGKDYMTLYLQDKSGDIEAKLWTVTKDDMKILKPEIIVWVKGDVINYRGRKQMKVNQFRLATAEDGVKTQDFVDGAPLSPNEIQDELSHFILEIENAHLQRITRHLLKKYQDKFFTYPAASSHHHNFAGGLSYHVLTMLKIAKSLCDIYPLLNRSLLYSAIILHDIGKVRELSGPVATTYTVEGNLLGHISIASDEVAETAKELGIDSEEVMLLRHMILAHHGKMEFGSPKLPHLKEAEILFFIDNIDAKMNMFDKAFKKTEKGQFTERIFGMDNRQFYNPEKLD persistent 313 yhaM 3'-5' exoribonuclease YhaM 3.1.-.- COG3481,J WP_002449625.1 UPI00019FCD91 UniRef100_UPI00019FCD91,UniRef50_Q9KDN6,UniRef90_A0A380G1H6 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 20895 21854 . - . GCA_005502385.1_00041_gene GCA_005502385.1_00041 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKIMNKLIVPVTAGVLLLGGCSSDSTDSKDNTLISSKAGNVTVKDVMDKIGKDQIASTSFSIELNKILADKYKDKVDTKRIDDDIKKEEKQYGGKDQFESMLKQQGMTLDDYKEQKRLSAYQKQLLNDKVKVSDKEIKDDTKKASHILIKVKSDSDKEGLSDKKAKAKAEKIQKEVEKNPNKFDDIAKKESMDSASAKKGGSLGYVIKGQMVDKFDKALFKLKEGQISDIVKTEYGYHIIKADKEDDFNKQKSQLKTKIIEQKVQKNPKLLTNAYKDLLKEYNVDYKDSDIKKSVEDTILNPEKLKEQQSSSASSGLSS . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 20895 21854 . - . GCA_005502385.1_00041_mRNA GCA_005502385.1_00041 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKIMNKLIVPVTAGVLLLGGCSSDSTDSKDNTLISSKAGNVTVKDVMDKIGKDQIASTSFSIELNKILADKYKDKVDTKRIDDDIKKEEKQYGGKDQFESMLKQQGMTLDDYKEQKRLSAYQKQLLNDKVKVSDKEIKDDTKKASHILIKVKSDSDKEGLSDKKAKAKAEKIQKEVEKNPNKFDDIAKKESMDSASAKKGGSLGYVIKGQMVDKFDKALFKLKEGQISDIVKTEYGYHIIKADKEDDFNKQKSQLKTKIIEQKVQKNPKLLTNAYKDLLKEYNVDYKDSDIKKSVEDTILNPEKLKEQQSSSASSGLSS . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 20895 21854 . - 0 GCA_005502385.1_00041 GCA_005502385.1_00041_gene,GCA_005502385.1_00041_mRNA GCA_005502385.1_00041 Foldase protein PrsA GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKIMNKLIVPVTAGVLLLGGCSSDSTDSKDNTLISSKAGNVTVKDVMDKIGKDQIASTSFSIELNKILADKYKDKVDTKRIDDDIKKEEKQYGGKDQFESMLKQQGMTLDDYKEQKRLSAYQKQLLNDKVKVSDKEIKDDTKKASHILIKVKSDSDKEGLSDKKAKAKAEKIQKEVEKNPNKFDDIAKKESMDSASAKKGGSLGYVIKGQMVDKFDKALFKLKEGQISDIVKTEYGYHIIKADKEDDFNKQKSQLKTKIIEQKVQKNPKLLTNAYKDLLKEYNVDYKDSDIKKSVEDTILNPEKLKEQQSSSASSGLSS persistent 319 peptidylprolyl isomerase WP_017176388.1 UPI0002D63E09 UniRef100_A0A4Q9WMK6,UniRef50_Q2G2S6,UniRef90_A0A4Q9WMK6 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 22079 22636 . - . GCA_005502385.1_00042_gene GCA_005502385.1_00042 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MFLCKRHIDIHARFGVPRIAFLSIVTTIIAFLVSYEIMYYFVKTPLSDKYFLLLILFIILMYPIHKTIHLFFFLPYIHAFRWHKLNKKKWLPYFNTYVNTPVRKFYFCINLILPFLIITSILIFLTYHFPSYGHYFMFLFALNLGLSVMDFLYLKIILFSKEGQFVEEHQTGINLLTKVPFHSKF . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 22079 22636 . - . GCA_005502385.1_00042_mRNA GCA_005502385.1_00042 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MFLCKRHIDIHARFGVPRIAFLSIVTTIIAFLVSYEIMYYFVKTPLSDKYFLLLILFIILMYPIHKTIHLFFFLPYIHAFRWHKLNKKKWLPYFNTYVNTPVRKFYFCINLILPFLIITSILIFLTYHFPSYGHYFMFLFALNLGLSVMDFLYLKIILFSKEGQFVEEHQTGINLLTKVPFHSKF . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 22079 22636 . - 0 GCA_005502385.1_00042 GCA_005502385.1_00042_gene,GCA_005502385.1_00042_mRNA GCA_005502385.1_00042 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MFLCKRHIDIHARFGVPRIAFLSIVTTIIAFLVSYEIMYYFVKTPLSDKYFLLLILFIILMYPIHKTIHLFFFLPYIHAFRWHKLNKKKWLPYFNTYVNTPVRKFYFCINLILPFLIITSILIFLTYHFPSYGHYFMFLFALNLGLSVMDFLYLKIILFSKEGQFVEEHQTGINLLTKVPFHSKF persistent 185 DUF3267 domain-containing protein WP_017176387.1 UPI00031773BA UniRef100_A0A4Q9WPP9,UniRef50_Q2G2S9,UniRef90_A0AAE5JMB7 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 22836 23219 . - . GCA_005502385.1_00043_gene GCA_005502385.1_00043 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKVTRVLFGIGVGLASGIAVSWMNRDQQRYNANASGQKVPTGARSELEREIETIKRSFYNIIDYSKQVKNDGVQQGSDIANEFKTLIGDFKSDINPNIEKLKSHIENLQNRGEEISNTFSEDKNNNK . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 22836 23219 . - . GCA_005502385.1_00043_mRNA GCA_005502385.1_00043 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKVTRVLFGIGVGLASGIAVSWMNRDQQRYNANASGQKVPTGARSELEREIETIKRSFYNIIDYSKQVKNDGVQQGSDIANEFKTLIGDFKSDINPNIEKLKSHIENLQNRGEEISNTFSEDKNNNK . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 22836 23219 . - 0 GCA_005502385.1_00043 GCA_005502385.1_00043_gene,GCA_005502385.1_00043_mRNA GCA_005502385.1_00043 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKVTRVLFGIGVGLASGIAVSWMNRDQQRYNANASGQKVPTGARSELEREIETIKRSFYNIIDYSKQVKNDGVQQGSDIANEFKTLIGDFKSDINPNIEKLKSHIENLQNRGEEISNTFSEDKNNNK persistent 127 ytxH YtxH domain-containing protein WP_002449632.1 UPI00019FCD94 UniRef100_A0A1L8Y6G0,UniRef50_A0A1S2MI30,UniRef90_A0A6N0I4G8 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 23372 23797 . - . GCA_005502385.1_00044_gene GCA_005502385.1_00044 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSETVFGKILTGEIPSYKVYENDYVYAFLDISQVTKGHTLLIPKKASPNIFETDEETMKHIGAAIPKVANAIKKAFQPDGLNIIQNNGEYADQSVFHLHFHFLPRYKNDIDGFGYQWETHENEISDEQKKDIAEQIKAQFE . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 23372 23797 . - . GCA_005502385.1_00044_mRNA GCA_005502385.1_00044 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSETVFGKILTGEIPSYKVYENDYVYAFLDISQVTKGHTLLIPKKASPNIFETDEETMKHIGAAIPKVANAIKKAFQPDGLNIIQNNGEYADQSVFHLHFHFLPRYKNDIDGFGYQWETHENEISDEQKKDIAEQIKAQFE . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 23372 23797 . - 0 GCA_005502385.1_00044 GCA_005502385.1_00044_gene,GCA_005502385.1_00044_mRNA GCA_005502385.1_00044 Protein hit GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSETVFGKILTGEIPSYKVYENDYVYAFLDISQVTKGHTLLIPKKASPNIFETDEETMKHIGAAIPKVANAIKKAFQPDGLNIIQNNGEYADQSVFHLHFHFLPRYKNDIDGFGYQWETHENEISDEQKKDIAEQIKAQFE persistent 141 Cell-cycle regulation Hit-like protein WP_017176386.1 UPI0002DA1D2C UniRef100_A0A4Q9WNI2,UniRef50_A0A1D2KB85,UniRef90_A0A380G0U7 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 23932 24669 . + . GCA_005502385.1_00045_gene GCA_005502385.1_00045 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTVKVEHLTGGYGKRPVIENINFELKKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGTLSISDTNINDDIEIYRRKLSYIPESPVIYEELTLEEHIAMTAMAYQISKEEAMKRARPLLKTFRLENELNVFPSHFSKGMKQKVMIICAFIVDPELYIIDEPFLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDKGKVVAFGNLEELREQTGLKDQTLDDIYIHVTQGGQTT . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 23932 24669 . + . GCA_005502385.1_00045_mRNA GCA_005502385.1_00045 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTVKVEHLTGGYGKRPVIENINFELKKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGTLSISDTNINDDIEIYRRKLSYIPESPVIYEELTLEEHIAMTAMAYQISKEEAMKRARPLLKTFRLENELNVFPSHFSKGMKQKVMIICAFIVDPELYIIDEPFLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDKGKVVAFGNLEELREQTGLKDQTLDDIYIHVTQGGQTT . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 23932 24669 . + 0 GCA_005502385.1_00045 GCA_005502385.1_00045_gene,GCA_005502385.1_00045_mRNA GCA_005502385.1_00045 ABC-type transporter ATP-binding protein EcsA GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTVKVEHLTGGYGKRPVIENINFELKKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGTLSISDTNINDDIEIYRRKLSYIPESPVIYEELTLEEHIAMTAMAYQISKEEAMKRARPLLKTFRLENELNVFPSHFSKGMKQKVMIICAFIVDPELYIIDEPFLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDKGKVVAFGNLEELREQTGLKDQTLDDIYIHVTQGGQTT persistent 245 rbbA ABC transporter ATP-binding protein COG1131,JV WP_048761762.1 UPI00065FCBF6 UniRef100_UPI00065FCBF6,UniRef50_A0A0M9FN87,UniRef90_A0A0S4MDX1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 24666 25889 . + . GCA_005502385.1_00046_gene GCA_005502385.1_00046 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNNEAIALFKQRYDAIKKEKHYYNKFIFNGHFTVFLVILLGAFILGYGQWLQHIPKNIDYAFLASIVIALTSIFPFRTFLKDADKLFLLPFEKNMEDYIKLGLRYSYFNRIILQIVLLIVLFPLFYKLNQQLVVSYIVMSVLALIHPILGLRLKWQWYRARLSQWILNVLIFSLNFITYYLILGKQLYFAILLTIIFFGMAYLIPKFKSLTLFPWEQLISVEERHHTNYYKFVNMFTDVKHLKENAARRKYLDFLLPTPKGRRFNSHNMYLYLFVRSFVRGKDALSIILRLVVIALVLMIWLSHPLVSIIIGSLFMYIILLQMSQFYTQQAYGLWPQVWPVSDSEVIKGYEKFLYRLMIMIGIIFAIIFIIFYIKYFFFAIVFFIVGWLTIRSTIKKLQYQETLLRD . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 24666 25889 . + . GCA_005502385.1_00046_mRNA GCA_005502385.1_00046 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNNEAIALFKQRYDAIKKEKHYYNKFIFNGHFTVFLVILLGAFILGYGQWLQHIPKNIDYAFLASIVIALTSIFPFRTFLKDADKLFLLPFEKNMEDYIKLGLRYSYFNRIILQIVLLIVLFPLFYKLNQQLVVSYIVMSVLALIHPILGLRLKWQWYRARLSQWILNVLIFSLNFITYYLILGKQLYFAILLTIIFFGMAYLIPKFKSLTLFPWEQLISVEERHHTNYYKFVNMFTDVKHLKENAARRKYLDFLLPTPKGRRFNSHNMYLYLFVRSFVRGKDALSIILRLVVIALVLMIWLSHPLVSIIIGSLFMYIILLQMSQFYTQQAYGLWPQVWPVSDSEVIKGYEKFLYRLMIMIGIIFAIIFIIFYIKYFFFAIVFFIVGWLTIRSTIKKLQYQETLLRD . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 24666 25889 . + 0 GCA_005502385.1_00046 GCA_005502385.1_00046_gene,GCA_005502385.1_00046_mRNA GCA_005502385.1_00046 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNNEAIALFKQRYDAIKKEKHYYNKFIFNGHFTVFLVILLGAFILGYGQWLQHIPKNIDYAFLASIVIALTSIFPFRTFLKDADKLFLLPFEKNMEDYIKLGLRYSYFNRIILQIVLLIVLFPLFYKLNQQLVVSYIVMSVLALIHPILGLRLKWQWYRARLSQWILNVLIFSLNFITYYLILGKQLYFAILLTIIFFGMAYLIPKFKSLTLFPWEQLISVEERHHTNYYKFVNMFTDVKHLKENAARRKYLDFLLPTPKGRRFNSHNMYLYLFVRSFVRGKDALSIILRLVVIALVLMIWLSHPLVSIIIGSLFMYIILLQMSQFYTQQAYGLWPQVWPVSDSEVIKGYEKFLYRLMIMIGIIFAIIFIIFYIKYFFFAIVFFIVGWLTIRSTIKKLQYQETLLRD persistent 407 ecsB ABC transporter permease EcsB WP_017176384.1 UPI0002F93770 UniRef100_A0A4Q9WML8,UniRef50_Q2G2F2,UniRef90_A0AAE5JKH1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 25945 26445 . - . GCA_005502385.1_00047_gene GCA_005502385.1_00047 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKIYTTYGTYDYLNQIRLNHPENHLFIYSTNDSSVIIEESEDKSILKHPTTYEVVNEINELNHQHFYSAIFIPSSEDHVNQLEKRLSNLNLDFSQFAGFKSYRFLRPEEGTTYKIYFGFANRQTYEDFKSSDMFNDYFSKEALRHYFGSSSQHSSYFERYLYPIND . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 25945 26445 . - . GCA_005502385.1_00047_mRNA GCA_005502385.1_00047 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKIYTTYGTYDYLNQIRLNHPENHLFIYSTNDSSVIIEESEDKSILKHPTTYEVVNEINELNHQHFYSAIFIPSSEDHVNQLEKRLSNLNLDFSQFAGFKSYRFLRPEEGTTYKIYFGFANRQTYEDFKSSDMFNDYFSKEALRHYFGSSSQHSSYFERYLYPIND . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 25945 26445 . - 0 GCA_005502385.1_00047 GCA_005502385.1_00047_gene,GCA_005502385.1_00047_mRNA GCA_005502385.1_00047 Signal transduction protein TRAP GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKIYTTYGTYDYLNQIRLNHPENHLFIYSTNDSSVIIEESEDKSILKHPTTYEVVNEINELNHQHFYSAIFIPSSEDHVNQLEKRLSNLNLDFSQFAGFKSYRFLRPEEGTTYKIYFGFANRQTYEDFKSSDMFNDYFSKEALRHYFGSSSQHSSYFERYLYPIND persistent 166 Signal transduction protein TRAP WP_017176383.1 UPI000309E3F6 UniRef100_A0A8X8GP79,UniRef50_Q2G2F3,UniRef90_A0A8X8GP79 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 26693 27730 . + . GCA_005502385.1_00048_gene GCA_005502385.1_00048 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MVHKKNNTILQTIKGESTSHTPVWFMRQAGRSQPEYRKLKEKYSLFDITHQPELCAYVTHLPVDNYNTDAAVLYKDIMTPLKPIGVDVEIQSGIGPVIHNPIKSMKDVEKLTQIDPKRDVPYVLETIKILTEEKLNVPLIGFTGAPFTLASYMIEGGPSKNYTFTKAMMYGDEETWFALMNHLVDVSIKYVTAQVEAGAELIQIFDSWVGALNVQDYRYYIKPSMDRLVRGIKEHHNIPVILFGVGASHLINEWNDLPIDVLGLDWRTSILKADQLGVNKTLQGNLDPSLLLAPWDVLEKRVKAILDEGMQRGKHIFNLGHGVFPEVQPDTLKKVTQLVHDYTQK . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 26693 27730 . + . GCA_005502385.1_00048_mRNA GCA_005502385.1_00048 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MVHKKNNTILQTIKGESTSHTPVWFMRQAGRSQPEYRKLKEKYSLFDITHQPELCAYVTHLPVDNYNTDAAVLYKDIMTPLKPIGVDVEIQSGIGPVIHNPIKSMKDVEKLTQIDPKRDVPYVLETIKILTEEKLNVPLIGFTGAPFTLASYMIEGGPSKNYTFTKAMMYGDEETWFALMNHLVDVSIKYVTAQVEAGAELIQIFDSWVGALNVQDYRYYIKPSMDRLVRGIKEHHNIPVILFGVGASHLINEWNDLPIDVLGLDWRTSILKADQLGVNKTLQGNLDPSLLLAPWDVLEKRVKAILDEGMQRGKHIFNLGHGVFPEVQPDTLKKVTQLVHDYTQK . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 26693 27730 . + 0 GCA_005502385.1_00048 GCA_005502385.1_00048_gene,GCA_005502385.1_00048_mRNA GCA_005502385.1_00048 Uroporphyrinogen decarboxylase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MVHKKNNTILQTIKGESTSHTPVWFMRQAGRSQPEYRKLKEKYSLFDITHQPELCAYVTHLPVDNYNTDAAVLYKDIMTPLKPIGVDVEIQSGIGPVIHNPIKSMKDVEKLTQIDPKRDVPYVLETIKILTEEKLNVPLIGFTGAPFTLASYMIEGGPSKNYTFTKAMMYGDEETWFALMNHLVDVSIKYVTAQVEAGAELIQIFDSWVGALNVQDYRYYIKPSMDRLVRGIKEHHNIPVILFGVGASHLINEWNDLPIDVLGLDWRTSILKADQLGVNKTLQGNLDPSLLLAPWDVLEKRVKAILDEGMQRGKHIFNLGHGVFPEVQPDTLKKVTQLVHDYTQK persistent 345 hemE uroporphyrinogen decarboxylase 4.1.1.37 GO:0004853,GO:0006779 WP_017176382.1 UPI0002EDEB27 UniRef100_A0A3S7GX53,UniRef50_P32395,UniRef90_A0A380FYS1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 27776 28699 . + . GCA_005502385.1_00049_gene GCA_005502385.1_00049 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTKTVGLLVMAYGTPYKESDIEPYYTDIRHGKRPTEEELQDLKNRYEFIGGLSPLAGTTDRQAKALTDALNKTYDDVEFKLYLGLKHISPYIEEAVEKMHNDGITEAVTVVLAPHYSSFSVGSYNKRAKEEADKYGIQLHHVERYYQQSKFIEYWTNKVNETLAEIPEEEHDETILIVSAHSLPKGLIERNNDPYPNEIKDTMDRLEASTNIKHVAQGWQSEGNTGTPWLGPDVQDLTRELYNEHHYKNFIYTPVGFVCEHLEVLYDNDYECKVVCDDIGANYYRPEMPNTNPLFIGAIVDEIKTVF . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 27776 28699 . + . GCA_005502385.1_00049_mRNA GCA_005502385.1_00049 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTKTVGLLVMAYGTPYKESDIEPYYTDIRHGKRPTEEELQDLKNRYEFIGGLSPLAGTTDRQAKALTDALNKTYDDVEFKLYLGLKHISPYIEEAVEKMHNDGITEAVTVVLAPHYSSFSVGSYNKRAKEEADKYGIQLHHVERYYQQSKFIEYWTNKVNETLAEIPEEEHDETILIVSAHSLPKGLIERNNDPYPNEIKDTMDRLEASTNIKHVAQGWQSEGNTGTPWLGPDVQDLTRELYNEHHYKNFIYTPVGFVCEHLEVLYDNDYECKVVCDDIGANYYRPEMPNTNPLFIGAIVDEIKTVF . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 27776 28699 . + 0 GCA_005502385.1_00049 GCA_005502385.1_00049_gene,GCA_005502385.1_00049_mRNA GCA_005502385.1_00049 Ferrochelatase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTKTVGLLVMAYGTPYKESDIEPYYTDIRHGKRPTEEELQDLKNRYEFIGGLSPLAGTTDRQAKALTDALNKTYDDVEFKLYLGLKHISPYIEEAVEKMHNDGITEAVTVVLAPHYSSFSVGSYNKRAKEEADKYGIQLHHVERYYQQSKFIEYWTNKVNETLAEIPEEEHDETILIVSAHSLPKGLIERNNDPYPNEIKDTMDRLEASTNIKHVAQGWQSEGNTGTPWLGPDVQDLTRELYNEHHYKNFIYTPVGFVCEHLEVLYDNDYECKVVCDDIGANYYRPEMPNTNPLFIGAIVDEIKTVF persistent 307 hemH ferrochelatase 4.98.1.1,4.99.1.9 GO:0004325,GO:0006779 WP_019835694.1 UPI00037DA257 UniRef100_UPI00037DA257,UniRef50_P32396,UniRef90_A0A533IWW9 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 28717 30111 . + . GCA_005502385.1_00050_gene GCA_005502385.1_00050 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSKKVAIIGAGITGLASAYYFKHYNEDIDVTIFEATSRPGGKIQTYRRDGYTIELGPESYLGRKTIMTDLAKDIGLEDDLITNQTGQSYIFAKNQLYPIPGGSIMGIPTDIKPFLKTRLISPLGKLRAGLDLVIPPIKIENDISVGEFFRKRLGNEMLENLIEPLMGGIYGTDIDQLSLMSTFPNFKYKEESYGSLIKGMKDEKRERTRKRQLYPGAPKGQFKQFRHGLSSFIEALAKNVEQKGVHFKYNTPVEDIHIHNDNYEIVTHNSRETFDGLLVTTPHQTFMKWFNHDSAFKYFNTMDSTTVATVVFAFDEKNIENTYNGTGFVIARTSHTDITACTWTTKKWPFTTPKGKVLLRAYVGKPGDTVVDDHTDEEIVNIARRDLSKMMTFKGDPDFTIVNRLPKSMPQYHIGHMTQIRNIQNHVKRQYNGLRITGAPFEAVGLPDCIQQGKNAVEELIDEL . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 28717 30111 . + . GCA_005502385.1_00050_mRNA GCA_005502385.1_00050 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSKKVAIIGAGITGLASAYYFKHYNEDIDVTIFEATSRPGGKIQTYRRDGYTIELGPESYLGRKTIMTDLAKDIGLEDDLITNQTGQSYIFAKNQLYPIPGGSIMGIPTDIKPFLKTRLISPLGKLRAGLDLVIPPIKIENDISVGEFFRKRLGNEMLENLIEPLMGGIYGTDIDQLSLMSTFPNFKYKEESYGSLIKGMKDEKRERTRKRQLYPGAPKGQFKQFRHGLSSFIEALAKNVEQKGVHFKYNTPVEDIHIHNDNYEIVTHNSRETFDGLLVTTPHQTFMKWFNHDSAFKYFNTMDSTTVATVVFAFDEKNIENTYNGTGFVIARTSHTDITACTWTTKKWPFTTPKGKVLLRAYVGKPGDTVVDDHTDEEIVNIARRDLSKMMTFKGDPDFTIVNRLPKSMPQYHIGHMTQIRNIQNHVKRQYNGLRITGAPFEAVGLPDCIQQGKNAVEELIDEL . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 28717 30111 . + 0 GCA_005502385.1_00050 GCA_005502385.1_00050_gene,GCA_005502385.1_00050_mRNA GCA_005502385.1_00050 Protoporphyrinogen oxidase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSKKVAIIGAGITGLASAYYFKHYNEDIDVTIFEATSRPGGKIQTYRRDGYTIELGPESYLGRKTIMTDLAKDIGLEDDLITNQTGQSYIFAKNQLYPIPGGSIMGIPTDIKPFLKTRLISPLGKLRAGLDLVIPPIKIENDISVGEFFRKRLGNEMLENLIEPLMGGIYGTDIDQLSLMSTFPNFKYKEESYGSLIKGMKDEKRERTRKRQLYPGAPKGQFKQFRHGLSSFIEALAKNVEQKGVHFKYNTPVEDIHIHNDNYEIVTHNSRETFDGLLVTTPHQTFMKWFNHDSAFKYFNTMDSTTVATVVFAFDEKNIENTYNGTGFVIARTSHTDITACTWTTKKWPFTTPKGKVLLRAYVGKPGDTVVDDHTDEEIVNIARRDLSKMMTFKGDPDFTIVNRLPKSMPQYHIGHMTQIRNIQNHVKRQYNGLRITGAPFEAVGLPDCIQQGKNAVEELIDEL persistent 464 hemY protoporphyrinogen oxidase 1.3.3.4 GO:0004729,GO:0006779 WP_048682829.1 UPI00066136EC UniRef100_UPI00066136EC,UniRef50_Q2FXA5,UniRef90_A0A8X8GYD7 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 30216 30776 . + . GCA_005502385.1_00051_gene GCA_005502385.1_00051 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTDVIIVHSQIGNAQNHWYQWLKHNLALEGYNVQLFNLDKADNKKLDMWLKTMKQQIKINHPDTYVVTHGYGSIAALKFIEQLDLKRPIEGFFSIAGFKEDAQDIDESVNLDHITIDYDEVKKKVKHFHGLASKDDEHVSYKETEKLLQALGGSIRIVEEGGHFLEEEGFVSFSELQEKMQKYMTQ . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 30216 30776 . + . GCA_005502385.1_00051_mRNA GCA_005502385.1_00051 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTDVIIVHSQIGNAQNHWYQWLKHNLALEGYNVQLFNLDKADNKKLDMWLKTMKQQIKINHPDTYVVTHGYGSIAALKFIEQLDLKRPIEGFFSIAGFKEDAQDIDESVNLDHITIDYDEVKKKVKHFHGLASKDDEHVSYKETEKLLQALGGSIRIVEEGGHFLEEEGFVSFSELQEKMQKYMTQ . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 30216 30776 . + 0 GCA_005502385.1_00051 GCA_005502385.1_00051_gene,GCA_005502385.1_00051_mRNA GCA_005502385.1_00051 Putative hydrolase YdeN GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTDVIIVHSQIGNAQNHWYQWLKHNLALEGYNVQLFNLDKADNKKLDMWLKTMKQQIKINHPDTYVVTHGYGSIAALKFIEQLDLKRPIEGFFSIAGFKEDAQDIDESVNLDHITIDYDEVKKKVKHFHGLASKDDEHVSYKETEKLLQALGGSIRIVEEGGHFLEEEGFVSFSELQEKMQKYMTQ persistent 186 Alpha/beta hydrolase WP_017176379.1 UPI0002F4879F UniRef100_A0A4Q9WML5,UniRef50_Q2FXA7,UniRef90_A0A4Q9WML5 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 31017 31119 . + . GCA_005502385.1_00052_gene GCA_005502385.1_00052 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 31017 31119 . + . GCA_005502385.1_00052_mRNA GCA_005502385.1_00052 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Infernal:001001 misc_RNA 31017 31119 74.4 + . GCA_005502385.1_00052 GCA_005502385.1_00052_gene,GCA_005502385.1_00052_mRNA GCA_005502385.1_00052 S774 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 31100 31173 . + . GCA_005502385.1_00053_gene GCA_005502385.1_00053 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 31100 31173 . + . GCA_005502385.1_00053_mRNA GCA_005502385.1_00053 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 31100 31173 . + . GCA_005502385.1_00053 GCA_005502385.1_00053_gene,GCA_005502385.1_00053_mRNA GCA_005502385.1_00053 tRNA-Met(cat) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 31188 31263 . + . GCA_005502385.1_00054_gene GCA_005502385.1_00054 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 31188 31263 . + . GCA_005502385.1_00054_mRNA GCA_005502385.1_00054 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 31188 31263 . + . GCA_005502385.1_00054 GCA_005502385.1_00054_gene,GCA_005502385.1_00054_mRNA GCA_005502385.1_00054 tRNA-Asp(gtc) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 31285 31357 . + . GCA_005502385.1_00055_gene GCA_005502385.1_00055 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 31285 31357 . + . GCA_005502385.1_00055_mRNA GCA_005502385.1_00055 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 31285 31357 . + . GCA_005502385.1_00055 GCA_005502385.1_00055_gene,GCA_005502385.1_00055_mRNA GCA_005502385.1_00055 tRNA-Phe(gaa) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 31369 31444 . + . GCA_005502385.1_00056_gene GCA_005502385.1_00056 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 31369 31444 . + . GCA_005502385.1_00056_mRNA GCA_005502385.1_00056 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 31369 31444 . + . GCA_005502385.1_00056 GCA_005502385.1_00056_gene,GCA_005502385.1_00056_mRNA GCA_005502385.1_00056 tRNA-His(gtg) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 31458 31531 . + . GCA_005502385.1_00057_gene GCA_005502385.1_00057 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 31458 31531 . + . GCA_005502385.1_00057_mRNA GCA_005502385.1_00057 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 31458 31531 . + . GCA_005502385.1_00057 GCA_005502385.1_00057_gene,GCA_005502385.1_00057_mRNA GCA_005502385.1_00057 tRNA-Gly(tcc) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 31544 31618 . + . GCA_005502385.1_00058_gene GCA_005502385.1_00058 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 31544 31618 . + . GCA_005502385.1_00058_mRNA GCA_005502385.1_00058 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 31544 31618 . + . GCA_005502385.1_00058 GCA_005502385.1_00058_gene,GCA_005502385.1_00058_mRNA GCA_005502385.1_00058 tRNA-Asn(gtt) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 31619 31692 . + . GCA_005502385.1_00059_gene GCA_005502385.1_00059 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 31619 31692 . + . GCA_005502385.1_00059_mRNA GCA_005502385.1_00059 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 31619 31692 . + . GCA_005502385.1_00059 GCA_005502385.1_00059_gene,GCA_005502385.1_00059_mRNA GCA_005502385.1_00059 tRNA-Glu(ttc) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 31742 31832 . + . GCA_005502385.1_00060_gene GCA_005502385.1_00060 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 31742 31832 . + . GCA_005502385.1_00060_mRNA GCA_005502385.1_00060 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Aragorn:001002 tRNA 31742 31832 . + . GCA_005502385.1_00060 GCA_005502385.1_00060_gene,GCA_005502385.1_00060_mRNA GCA_005502385.1_00060 tRNA-Ser(gga) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 32032 33426 . + . GCA_005502385.1_00061_gene GCA_005502385.1_00061 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MEFWLKEQSIKNKNKIAVIDGQYTLTYNQLYSTAYQLSKKLLSLNESRVGLYIGNDIDSVILVHACWLAQIEIAMINTRLTTTEMTNQMNSVNVQLILTTKEFDLSSHQVLSFNQLNDYPDTPNHKQFDIHRIASIMFTSGTTGPQKAVPQTFKNHYASALGCKESLGFDQQTTWLSVLPIYHISGLSVILRAVIEGFTVRLLNKYNTEDMLTIIKNEYPTHVSLVPQTLKWLMDAGLNKPYSIEKILLGGAKLSSTLIQQALSYQLPIYNSFGMTETCSQFLTASPDMLAKRYDTVGKPSDNVEVCIKQPNEEGHGELLIKGDSVMNGYLYPKDLDNTFEDGFFKTGDIAEIDSDGFVMVYDRRKDLIISGGENIYPYEIETVAKTFNGIIDAVCVPKEDETWGQIPALYYVASETIEVNDLINFLQEHLAKYKVPKIYQHVNALPYTSTGKLQRNKVGTEDH . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 32032 33426 . + . GCA_005502385.1_00061_mRNA GCA_005502385.1_00061 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MEFWLKEQSIKNKNKIAVIDGQYTLTYNQLYSTAYQLSKKLLSLNESRVGLYIGNDIDSVILVHACWLAQIEIAMINTRLTTTEMTNQMNSVNVQLILTTKEFDLSSHQVLSFNQLNDYPDTPNHKQFDIHRIASIMFTSGTTGPQKAVPQTFKNHYASALGCKESLGFDQQTTWLSVLPIYHISGLSVILRAVIEGFTVRLLNKYNTEDMLTIIKNEYPTHVSLVPQTLKWLMDAGLNKPYSIEKILLGGAKLSSTLIQQALSYQLPIYNSFGMTETCSQFLTASPDMLAKRYDTVGKPSDNVEVCIKQPNEEGHGELLIKGDSVMNGYLYPKDLDNTFEDGFFKTGDIAEIDSDGFVMVYDRRKDLIISGGENIYPYEIETVAKTFNGIIDAVCVPKEDETWGQIPALYYVASETIEVNDLINFLQEHLAKYKVPKIYQHVNALPYTSTGKLQRNKVGTEDH . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 32032 33426 . + 0 GCA_005502385.1_00061 GCA_005502385.1_00061_gene,GCA_005502385.1_00061_mRNA GCA_005502385.1_00061 2-succinylbenzoate--CoA ligase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MEFWLKEQSIKNKNKIAVIDGQYTLTYNQLYSTAYQLSKKLLSLNESRVGLYIGNDIDSVILVHACWLAQIEIAMINTRLTTTEMTNQMNSVNVQLILTTKEFDLSSHQVLSFNQLNDYPDTPNHKQFDIHRIASIMFTSGTTGPQKAVPQTFKNHYASALGCKESLGFDQQTTWLSVLPIYHISGLSVILRAVIEGFTVRLLNKYNTEDMLTIIKNEYPTHVSLVPQTLKWLMDAGLNKPYSIEKILLGGAKLSSTLIQQALSYQLPIYNSFGMTETCSQFLTASPDMLAKRYDTVGKPSDNVEVCIKQPNEEGHGELLIKGDSVMNGYLYPKDLDNTFEDGFFKTGDIAEIDSDGFVMVYDRRKDLIISGGENIYPYEIETVAKTFNGIIDAVCVPKEDETWGQIPALYYVASETIEVNDLINFLQEHLAKYKVPKIYQHVNALPYTSTGKLQRNKVGTEDH persistent 464 menE o-succinylbenzoate--CoA ligase 6.2.1.26 GO:0005524,GO:0008756,GO:0009234 WP_017176378.1 UPI0002FD2F5C UniRef100_A0A8X8GJQ2,UniRef50_Q2G2V3,UniRef90_A0A6N0I4L6 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 33427 34434 . + . GCA_005502385.1_00062_gene GCA_005502385.1_00062 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKIIDIQFYYYTAPFHSPITTPKVEMTHRKALIVRFISDEGKNYFGECNAFETDWYDTETIETVKIRIQQWSKKILNQSFNTFSDWLPYLDVLDSYPATRCTVVMAVYQMFYSQPCFNVEYGATVSGLSSSQLQTLKDTKPARIKLKWSSHLINDIKKLRNELPFEFSLALDANESLDMSQFQLLKEIDQHNLLYVEEPFKDLNDLSYIDVTHYPAIAIDEKATDVQSILKIIHQYPITAVVVKPFRLGGIDRALELIHLLKEKDIKVIVGGMYEYGLSRYFTALLAKEGSYPGDITPDGYYFETDFTQGIGKLKEGLIYFNPPKVNINALSVYE . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 33427 34434 . + . GCA_005502385.1_00062_mRNA GCA_005502385.1_00062 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKIIDIQFYYYTAPFHSPITTPKVEMTHRKALIVRFISDEGKNYFGECNAFETDWYDTETIETVKIRIQQWSKKILNQSFNTFSDWLPYLDVLDSYPATRCTVVMAVYQMFYSQPCFNVEYGATVSGLSSSQLQTLKDTKPARIKLKWSSHLINDIKKLRNELPFEFSLALDANESLDMSQFQLLKEIDQHNLLYVEEPFKDLNDLSYIDVTHYPAIAIDEKATDVQSILKIIHQYPITAVVVKPFRLGGIDRALELIHLLKEKDIKVIVGGMYEYGLSRYFTALLAKEGSYPGDITPDGYYFETDFTQGIGKLKEGLIYFNPPKVNINALSVYE . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 33427 34434 . + 0 GCA_005502385.1_00062 GCA_005502385.1_00062_gene,GCA_005502385.1_00062_mRNA GCA_005502385.1_00062 o-succinylbenzoate synthase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKIIDIQFYYYTAPFHSPITTPKVEMTHRKALIVRFISDEGKNYFGECNAFETDWYDTETIETVKIRIQQWSKKILNQSFNTFSDWLPYLDVLDSYPATRCTVVMAVYQMFYSQPCFNVEYGATVSGLSSSQLQTLKDTKPARIKLKWSSHLINDIKKLRNELPFEFSLALDANESLDMSQFQLLKEIDQHNLLYVEEPFKDLNDLSYIDVTHYPAIAIDEKATDVQSILKIIHQYPITAVVVKPFRLGGIDRALELIHLLKEKDIKVIVGGMYEYGLSRYFTALLAKEGSYPGDITPDGYYFETDFTQGIGKLKEGLIYFNPPKVNINALSVYE persistent 335 menC o-succinylbenzoate synthase 4.2.1.113 GO:0009234,GO:0016829 WP_017176377.1 UPI0002F6BCCF UniRef100_A0A3S7GZU2,UniRef50_A0A0H2WWB5,UniRef90_A0A3S7GZU2 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 34425 34670 . - . GCA_005502385.1_00063_gene GCA_005502385.1_00063 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MLKKLFLSIIRIYQRFISPMTPPTCRFYPTCSEYTKEAIEVYGAFKGGYMGVKRILKCHPFHEGGFDPVPLKKDKHTHHHS . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 34425 34670 . - . GCA_005502385.1_00063_mRNA GCA_005502385.1_00063 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MLKKLFLSIIRIYQRFISPMTPPTCRFYPTCSEYTKEAIEVYGAFKGGYMGVKRILKCHPFHEGGFDPVPLKKDKHTHHHS . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 34425 34670 . - 0 GCA_005502385.1_00063 GCA_005502385.1_00063_gene,GCA_005502385.1_00063_mRNA GCA_005502385.1_00063 Putative membrane protein insertion efficiency factor GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MLKKLFLSIIRIYQRFISPMTPPTCRFYPTCSEYTKEAIEVYGAFKGGYMGVKRILKCHPFHEGGFDPVPLKKDKHTHHHS persistent 81 yidD membrane protein insertion efficiency factor YidD WP_019835282.1 UPI00037B8855 UniRef100_UPI00037B8855,UniRef50_A0A933WUI0,UniRef90_A0A8X8KI79 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 34738 35211 . + . GCA_005502385.1_00064_gene GCA_005502385.1_00064 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MEFIDQDDRRVTMQYKTDNDIPNGNHVLAIPIFQNQLLFTKHSKRGIEFPGGKVEINETSQQAIARELYEETGGKVEALYYIAQYQVHTFDKSLFKKDVYVIKVKSIEHKHDYLETEGPILFHLVNEIPEHQKSYLIKDEAILKCLERVKDLGYYKY . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 34738 35211 . + . GCA_005502385.1_00064_mRNA GCA_005502385.1_00064 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MEFIDQDDRRVTMQYKTDNDIPNGNHVLAIPIFQNQLLFTKHSKRGIEFPGGKVEINETSQQAIARELYEETGGKVEALYYIAQYQVHTFDKSLFKKDVYVIKVKSIEHKHDYLETEGPILFHLVNEIPEHQKSYLIKDEAILKCLERVKDLGYYKY . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 34738 35211 . + 0 GCA_005502385.1_00064 GCA_005502385.1_00064_gene,GCA_005502385.1_00064_mRNA GCA_005502385.1_00064 Putative 8-oxo-dGTP diphosphatase YtkD GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MEFIDQDDRRVTMQYKTDNDIPNGNHVLAIPIFQNQLLFTKHSKRGIEFPGGKVEINETSQQAIARELYEETGGKVEALYYIAQYQVHTFDKSLFKKDVYVIKVKSIEHKHDYLETEGPILFHLVNEIPEHQKSYLIKDEAILKCLERVKDLGYYKY persistent 157 ytkD RNA deprotection pyrophosphohydrolase GO:0006139,GO:0017111 WP_017176375.1 UPI00031A6E63 UniRef100_A0A8X8KJ50,UniRef50_A0A0D6XNS6,UniRef90_A0A8X8KJ50 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 35192 35971 . + . GCA_005502385.1_00065_gene GCA_005502385.1_00065 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MGITNIRTMPVESNTHRFEEITYTVDELNVKALQMIPAYHNVKRIVVYLRGGKGQVGRVRASRLMQFSDPYTLVIGPYYRGSNGSEGKDEFCNADLHDVTVLIRLLKNKYPQAFVHMIGFSRGGIQGLLSFQDDPVDSYIIWGGVSDVHLMYEERVDLRGMLRRMVGHPKKDKKAYEQRNAIRTLNQNSPPILIVHGGKDWQVGIHQAYFLQEQLERKGVKHDTFYQLDEGHVPRPKALKEVLDYIHQWMNNIEQDLQR . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 35192 35971 . + . GCA_005502385.1_00065_mRNA GCA_005502385.1_00065 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MGITNIRTMPVESNTHRFEEITYTVDELNVKALQMIPAYHNVKRIVVYLRGGKGQVGRVRASRLMQFSDPYTLVIGPYYRGSNGSEGKDEFCNADLHDVTVLIRLLKNKYPQAFVHMIGFSRGGIQGLLSFQDDPVDSYIIWGGVSDVHLMYEERVDLRGMLRRMVGHPKKDKKAYEQRNAIRTLNQNSPPILIVHGGKDWQVGIHQAYFLQEQLERKGVKHDTFYQLDEGHVPRPKALKEVLDYIHQWMNNIEQDLQR . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 35192 35971 . + 0 GCA_005502385.1_00065 GCA_005502385.1_00065_gene,GCA_005502385.1_00065_mRNA GCA_005502385.1_00065 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MGITNIRTMPVESNTHRFEEITYTVDELNVKALQMIPAYHNVKRIVVYLRGGKGQVGRVRASRLMQFSDPYTLVIGPYYRGSNGSEGKDEFCNADLHDVTVLIRLLKNKYPQAFVHMIGFSRGGIQGLLSFQDDPVDSYIIWGGVSDVHLMYEERVDLRGMLRRMVGHPKKDKKAYEQRNAIRTLNQNSPPILIVHGGKDWQVGIHQAYFLQEQLERKGVKHDTFYQLDEGHVPRPKALKEVLDYIHQWMNNIEQDLQR persistent 259 Dipeptidyl aminopeptidase WP_017176374.1 UPI0003045B23 UniRef100_A0A3S7GXZ1,UniRef50_Q2G2V6,UniRef90_A0A3S7GXZ1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 36013 37605 . - . GCA_005502385.1_00066_gene GCA_005502385.1_00066 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSIDTYSETPKIKHLLEKETTLFQLSTTQLYYKILNNNEGELTELGAINMSTGKYTGRSPKDKFIVNEPSYRDNIDWGDINQPIDEDVFLKLYNKVLDYLDQKDELYVFNGYAGSDKDSQLKLKIINELAWHNLFAQNMFIRPESIEEASHIKPNFTIVSAPHFKANPDVDGTHSETFIIVSFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSATPTRKLIGDDEHGWNKNGIFNIEGGCYAKAIHLSKEKEPQIYNAIQYGTILENTIVNERGHVDFDDNTNTENTRAAYPIHHIDNIVLPSKAAHPNTIIFLTADAFGVLPPISKLSKSQAMYHFLSGFTSKLAGTERGVTEPEPSFSTCFGAPFLPLHPTKYANLLGKLIDDHDVDVYLVNTGWTGGKYGVGRRISLHYTRYMVDQAISGKLKQATFTKDEIFGLSIPTEMEDVPKTILNPIHAWNDPEAYRHQANDLKQRFEENFKTFGDEVKDIAKDGGFSH . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 36013 37605 . - . GCA_005502385.1_00066_mRNA GCA_005502385.1_00066 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSIDTYSETPKIKHLLEKETTLFQLSTTQLYYKILNNNEGELTELGAINMSTGKYTGRSPKDKFIVNEPSYRDNIDWGDINQPIDEDVFLKLYNKVLDYLDQKDELYVFNGYAGSDKDSQLKLKIINELAWHNLFAQNMFIRPESIEEASHIKPNFTIVSAPHFKANPDVDGTHSETFIIVSFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSATPTRKLIGDDEHGWNKNGIFNIEGGCYAKAIHLSKEKEPQIYNAIQYGTILENTIVNERGHVDFDDNTNTENTRAAYPIHHIDNIVLPSKAAHPNTIIFLTADAFGVLPPISKLSKSQAMYHFLSGFTSKLAGTERGVTEPEPSFSTCFGAPFLPLHPTKYANLLGKLIDDHDVDVYLVNTGWTGGKYGVGRRISLHYTRYMVDQAISGKLKQATFTKDEIFGLSIPTEMEDVPKTILNPIHAWNDPEAYRHQANDLKQRFEENFKTFGDEVKDIAKDGGFSH . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 36013 37605 . - 0 GCA_005502385.1_00066 GCA_005502385.1_00066_gene,GCA_005502385.1_00066_mRNA GCA_005502385.1_00066 Phosphoenolpyruvate carboxykinase (ATP) GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSIDTYSETPKIKHLLEKETTLFQLSTTQLYYKILNNNEGELTELGAINMSTGKYTGRSPKDKFIVNEPSYRDNIDWGDINQPIDEDVFLKLYNKVLDYLDQKDELYVFNGYAGSDKDSQLKLKIINELAWHNLFAQNMFIRPESIEEASHIKPNFTIVSAPHFKANPDVDGTHSETFIIVSFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSATPTRKLIGDDEHGWNKNGIFNIEGGCYAKAIHLSKEKEPQIYNAIQYGTILENTIVNERGHVDFDDNTNTENTRAAYPIHHIDNIVLPSKAAHPNTIIFLTADAFGVLPPISKLSKSQAMYHFLSGFTSKLAGTERGVTEPEPSFSTCFGAPFLPLHPTKYANLLGKLIDDHDVDVYLVNTGWTGGKYGVGRRISLHYTRYMVDQAISGKLKQATFTKDEIFGLSIPTEMEDVPKTILNPIHAWNDPEAYRHQANDLKQRFEENFKTFGDEVKDIAKDGGFSH persistent 530 pckA phosphoenolpyruvate carboxykinase (ATP) 4.1.1.49 GO:0004612,GO:0006094 WP_017176373.1 UPI00030F6F63 UniRef100_A0A3S7GX79,UniRef50_Q2G1W2,UniRef90_A0A3S7GX79 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 37763 37875 . + . GCA_005502385.1_00067_gene GCA_005502385.1_00067 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 37763 37875 . + . GCA_005502385.1_00067_mRNA GCA_005502385.1_00067 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Infernal:001001 misc_RNA 37763 37875 79.4 + . GCA_005502385.1_00067 GCA_005502385.1_00067_gene,GCA_005502385.1_00067_mRNA GCA_005502385.1_00067 SAM GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 37990 39186 . + . GCA_005502385.1_00068_gene GCA_005502385.1_00068 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTYNKRLFTSESVTEGHPDKIADQVSDAILDEILKDDPNARVACETTVTTGMALISGEISTSTYVDIPKVVRETIKNIGYTRAKYGYDYQTMAVLTAIDEQSPDIAQGVDKALEYRNDISEEEIEATGAGDQGLMFGYATNETETYMPLPIFLSHQLAKRLSDVRKDGTLGYLRPDGKVQVTVEYDENDKPKRIDTIVVSSQHAEDIELEQIQKDIKEHVIYPTVPEGLIDDETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLAEQCEVQLAYAIGVAEPVSIAIDTFKTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKHPIYKQTAAYGHFGRTDVLLPWEKLDKVNVLKDAVQK . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 37990 39186 . + . GCA_005502385.1_00068_mRNA GCA_005502385.1_00068 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTYNKRLFTSESVTEGHPDKIADQVSDAILDEILKDDPNARVACETTVTTGMALISGEISTSTYVDIPKVVRETIKNIGYTRAKYGYDYQTMAVLTAIDEQSPDIAQGVDKALEYRNDISEEEIEATGAGDQGLMFGYATNETETYMPLPIFLSHQLAKRLSDVRKDGTLGYLRPDGKVQVTVEYDENDKPKRIDTIVVSSQHAEDIELEQIQKDIKEHVIYPTVPEGLIDDETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLAEQCEVQLAYAIGVAEPVSIAIDTFKTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKHPIYKQTAAYGHFGRTDVLLPWEKLDKVNVLKDAVQK . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 37990 39186 . + 0 GCA_005502385.1_00068 GCA_005502385.1_00068_gene,GCA_005502385.1_00068_mRNA GCA_005502385.1_00068 S-adenosylmethionine synthase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTYNKRLFTSESVTEGHPDKIADQVSDAILDEILKDDPNARVACETTVTTGMALISGEISTSTYVDIPKVVRETIKNIGYTRAKYGYDYQTMAVLTAIDEQSPDIAQGVDKALEYRNDISEEEIEATGAGDQGLMFGYATNETETYMPLPIFLSHQLAKRLSDVRKDGTLGYLRPDGKVQVTVEYDENDKPKRIDTIVVSSQHAEDIELEQIQKDIKEHVIYPTVPEGLIDDETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLAEQCEVQLAYAIGVAEPVSIAIDTFKTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKHPIYKQTAAYGHFGRTDVLLPWEKLDKVNVLKDAVQK persistent 398 metK methionine adenosyltransferase 2.5.1.6 GO:0000287,GO:0004478,GO:0005524,GO:0005737,GO:0006556,GO:0006730 COG0192,H WP_017176372.1 UPI0002F74176 UniRef100_A0A1L8Y6J8,UniRef50_P72871,UniRef90_Q2G1W4 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 39285 40196 . + . GCA_005502385.1_00069_gene GCA_005502385.1_00069 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNSFGPVEIGLIAAIIIAIICFILFLVALKSKNNMKHKANEEYNLKEQQLKSSHEEALEKERIENKKQVTKQKEEFEVTVNGKEREIDALKLFSKNKSEYVTDMRLIGIRDRLVKEKRIRREDMHIMANIFLPSNEFNNIQRISHLVLTRTGLYIIDSQLLKGHVYNGISGAQFQELPMLKQVFDTLDLNTQAPQTLVLDQHEDNHSKLSFINYSDQLSAIEKLATDLQTELGLKYTPTSILYFNPKHDKDVTISNYAQSSSVKVLVGPEQLDEFFNKFVFHGRIQYNVDELQNIMDKIESFN . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 39285 40196 . + . GCA_005502385.1_00069_mRNA GCA_005502385.1_00069 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNSFGPVEIGLIAAIIIAIICFILFLVALKSKNNMKHKANEEYNLKEQQLKSSHEEALEKERIENKKQVTKQKEEFEVTVNGKEREIDALKLFSKNKSEYVTDMRLIGIRDRLVKEKRIRREDMHIMANIFLPSNEFNNIQRISHLVLTRTGLYIIDSQLLKGHVYNGISGAQFQELPMLKQVFDTLDLNTQAPQTLVLDQHEDNHSKLSFINYSDQLSAIEKLATDLQTELGLKYTPTSILYFNPKHDKDVTISNYAQSSSVKVLVGPEQLDEFFNKFVFHGRIQYNVDELQNIMDKIESFN . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 39285 40196 . + 0 GCA_005502385.1_00069 GCA_005502385.1_00069_gene,GCA_005502385.1_00069_mRNA GCA_005502385.1_00069 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNSFGPVEIGLIAAIIIAIICFILFLVALKSKNNMKHKANEEYNLKEQQLKSSHEEALEKERIENKKQVTKQKEEFEVTVNGKEREIDALKLFSKNKSEYVTDMRLIGIRDRLVKEKRIRREDMHIMANIFLPSNEFNNIQRISHLVLTRTGLYIIDSQLLKGHVYNGISGAQFQELPMLKQVFDTLDLNTQAPQTLVLDQHEDNHSKLSFINYSDQLSAIEKLATDLQTELGLKYTPTSILYFNPKHDKDVTISNYAQSSSVKVLVGPEQLDEFFNKFVFHGRIQYNVDELQNIMDKIESFN persistent 303 NERD domain-containing protein WP_017176371.1 UPI0002E867F0 UniRef100_A0A4V2KWX1,UniRef50_Q2G1W5,UniRef90_A0A974KW54 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 40311 41147 . + . GCA_005502385.1_00070_gene GCA_005502385.1_00070 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MDYIEFYNGNQMPMLGLGTFRVENDDTCKEAVKHAIESGYRSIDTAKVYGNEEQVGQGIKEGLESTGLNREDIFVTSKLFFEDFGRKNVAQAYETSIQKLGLDYLDLYLVHWPGTNEAIMIDTWKGMEDLYKDNKVKNIGVSNFNPDHFEALLAQVSIKPVINQVEFHPYFTQEKLRKYLEAQNIYMESWSPFMNAQILNDETLNEIGKEVNKSAAQVIIKWNMQHNVVVIPKSVTSSRIEENIDVFDFELSAEQMKRIDDLNKDQRIGPDPDTFEGQ . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 40311 41147 . + . GCA_005502385.1_00070_mRNA GCA_005502385.1_00070 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MDYIEFYNGNQMPMLGLGTFRVENDDTCKEAVKHAIESGYRSIDTAKVYGNEEQVGQGIKEGLESTGLNREDIFVTSKLFFEDFGRKNVAQAYETSIQKLGLDYLDLYLVHWPGTNEAIMIDTWKGMEDLYKDNKVKNIGVSNFNPDHFEALLAQVSIKPVINQVEFHPYFTQEKLRKYLEAQNIYMESWSPFMNAQILNDETLNEIGKEVNKSAAQVIIKWNMQHNVVVIPKSVTSSRIEENIDVFDFELSAEQMKRIDDLNKDQRIGPDPDTFEGQ . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 40311 41147 . + 0 GCA_005502385.1_00070 GCA_005502385.1_00070_gene,GCA_005502385.1_00070_mRNA GCA_005502385.1_00070 Glyoxal reductase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MDYIEFYNGNQMPMLGLGTFRVENDDTCKEAVKHAIESGYRSIDTAKVYGNEEQVGQGIKEGLESTGLNREDIFVTSKLFFEDFGRKNVAQAYETSIQKLGLDYLDLYLVHWPGTNEAIMIDTWKGMEDLYKDNKVKNIGVSNFNPDHFEALLAQVSIKPVINQVEFHPYFTQEKLRKYLEAQNIYMESWSPFMNAQILNDETLNEIGKEVNKSAAQVIIKWNMQHNVVVIPKSVTSSRIEENIDVFDFELSAEQMKRIDDLNKDQRIGPDPDTFEGQ persistent 278 Glyoxal reductase WP_017176370.1 UPI0003185223 UniRef100_A0A1L8Y6F5,UniRef50_B9DN15,UniRef90_A0AAE5JL97 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 41205 41558 . - . GCA_005502385.1_00071_gene GCA_005502385.1_00071 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MIQALLIMIGGGLGAVVRAWLTDVTKSKWSTSIPIATLIVNWIGSFLIGLTTGLSIHLNWIHMFFITGFLGGLTTFSTMSYELAQCLTPSFKLFKFMMYSLLQFVIGFIACWIGFII . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 41205 41558 . - . GCA_005502385.1_00071_mRNA GCA_005502385.1_00071 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MIQALLIMIGGGLGAVVRAWLTDVTKSKWSTSIPIATLIVNWIGSFLIGLTTGLSIHLNWIHMFFITGFLGGLTTFSTMSYELAQCLTPSFKLFKFMMYSLLQFVIGFIACWIGFII . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 41205 41558 . - 0 GCA_005502385.1_00071 GCA_005502385.1_00071_gene,GCA_005502385.1_00071_mRNA GCA_005502385.1_00071 Putative fluoride ion transporter CrcB GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MIQALLIMIGGGLGAVVRAWLTDVTKSKWSTSIPIATLIVNWIGSFLIGLTTGLSIHLNWIHMFFITGFLGGLTTFSTMSYELAQCLTPSFKLFKFMMYSLLQFVIGFIACWIGFII persistent 117 fluC Fluoride-specific ion channel FluC WP_017176369.1 UPI0002E4C408 UniRef100_A0A4Q9WMM3,UniRef50_Q2FXE5,UniRef90_A0A6B8SA23 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 41555 41920 . - . GCA_005502385.1_00072_gene GCA_005502385.1_00072 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MQYITVFIGGMLGALLRFLFSFMNQSNTFPIGTLIANLSGAFLMGYLSVVMIKLFKDHPKIKKGITTGFLGALTTFSTFQFELVTLLYSHHIILALVYAFISYCFGVILCWIGMTLGGLTS . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 41555 41920 . - . GCA_005502385.1_00072_mRNA GCA_005502385.1_00072 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MQYITVFIGGMLGALLRFLFSFMNQSNTFPIGTLIANLSGAFLMGYLSVVMIKLFKDHPKIKKGITTGFLGALTTFSTFQFELVTLLYSHHIILALVYAFISYCFGVILCWIGMTLGGLTS . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 41555 41920 . - 0 GCA_005502385.1_00072 GCA_005502385.1_00072_gene,GCA_005502385.1_00072_mRNA GCA_005502385.1_00072 Putative fluoride ion transporter CrcB GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MQYITVFIGGMLGALLRFLFSFMNQSNTFPIGTLIANLSGAFLMGYLSVVMIKLFKDHPKIKKGITTGFLGALTTFSTFQFELVTLLYSHHIILALVYAFISYCFGVILCWIGMTLGGLTS persistent 121 crcB fluoride efflux transporter CrcB WP_017176368.1 UPI00036D7A82 UniRef100_A0A1K1Y1S4,UniRef50_Q2FXE6,UniRef90_A0A1K1Y1S4 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 41960 42268 . - . GCA_005502385.1_00073_gene GCA_005502385.1_00073 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSKSKKYFYISVILLIISFYFNTFNPLLSIQFKSIKNLLIACSIVNVVILMASIIFSDKAIKHLNYKNKDWIKTASKILPYLILVVILFHIFASITTFGIFS . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 41960 42268 . - . GCA_005502385.1_00073_mRNA GCA_005502385.1_00073 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSKSKKYFYISVILLIISFYFNTFNPLLSIQFKSIKNLLIACSIVNVVILMASIIFSDKAIKHLNYKNKDWIKTASKILPYLILVVILFHIFASITTFGIFS . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 41960 42268 . - 0 GCA_005502385.1_00073 GCA_005502385.1_00073_gene,GCA_005502385.1_00073_mRNA GCA_005502385.1_00073 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSKSKKYFYISVILLIISFYFNTFNPLLSIQFKSIKNLLIACSIVNVVILMASIIFSDKAIKHLNYKNKDWIKTASKILPYLILVVILFHIFASITTFGIFS persistent 102 Cytochrome oxidase subunit II transmembrane region profile domain-containing protein WP_049379367.1 UPI00066E8FD9 UniRef100_UPI00066E8FD9,UniRef50_K9ASJ7,UniRef90_A0A3S7GXM3 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 42515 43228 . + . GCA_005502385.1_00074_gene GCA_005502385.1_00074 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTQLNVEVFADGADIEQMKAAYKNKEVDGFTTNPSLMAKAGVTDYKAFAEEAVREIPDASISFEVFSDDLDTMEKEAEILKQYGDNVFVKIPIVNSKGESTIELIKKLSADHVRLNVTAVYTIEQVKAITEAVTEGVPTYISVFAGRIADTGVDPLPLMKESVKVAHSKNGVKLLWASCREVFNVIQANEIGADIITCPADVVKKVNNNLGRDINELPVDTVQGFAKDIKSSGLSIL . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 42515 43228 . + . GCA_005502385.1_00074_mRNA GCA_005502385.1_00074 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTQLNVEVFADGADIEQMKAAYKNKEVDGFTTNPSLMAKAGVTDYKAFAEEAVREIPDASISFEVFSDDLDTMEKEAEILKQYGDNVFVKIPIVNSKGESTIELIKKLSADHVRLNVTAVYTIEQVKAITEAVTEGVPTYISVFAGRIADTGVDPLPLMKESVKVAHSKNGVKLLWASCREVFNVIQANEIGADIITCPADVVKKVNNNLGRDINELPVDTVQGFAKDIKSSGLSIL . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 42515 43228 . + 0 GCA_005502385.1_00074 GCA_005502385.1_00074_gene,GCA_005502385.1_00074_mRNA GCA_005502385.1_00074 Transaldolase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTQLNVEVFADGADIEQMKAAYKNKEVDGFTTNPSLMAKAGVTDYKAFAEEAVREIPDASISFEVFSDDLDTMEKEAEILKQYGDNVFVKIPIVNSKGESTIELIKKLSADHVRLNVTAVYTIEQVKAITEAVTEGVPTYISVFAGRIADTGVDPLPLMKESVKVAHSKNGVKLLWASCREVFNVIQANEIGADIITCPADVVKKVNNNLGRDINELPVDTVQGFAKDIKSSGLSIL persistent 237 talA transaldolase 2.2.1.2 GO:0004801,GO:0006098 COG0176,G WP_049379366.1 UPI00066B7C75 UniRef100_UPI00066B7C75,UniRef50_A0A0D0SMT5,UniRef90_A0A0D0SMT5 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 43414 43878 . + . GCA_005502385.1_00075_gene GCA_005502385.1_00075 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MEETAFREKVRKQLWFLNKKEKQLLEHTFEQNNASFNNAEQKFMKPTRFANQFLQVHIFRNKHFSNGYFFLLIILFVLTYILLLGWFLAGFIASLAVVNQFINPKAELSLIYLVLILVFAIISLVVSLYLIRFVTALFTKRLLEYKFNEKKSSY . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 43414 43878 . + . GCA_005502385.1_00075_mRNA GCA_005502385.1_00075 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MEETAFREKVRKQLWFLNKKEKQLLEHTFEQNNASFNNAEQKFMKPTRFANQFLQVHIFRNKHFSNGYFFLLIILFVLTYILLLGWFLAGFIASLAVVNQFINPKAELSLIYLVLILVFAIISLVVSLYLIRFVTALFTKRLLEYKFNEKKSSY . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 43414 43878 . + 0 GCA_005502385.1_00075 GCA_005502385.1_00075_gene,GCA_005502385.1_00075_mRNA GCA_005502385.1_00075 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MEETAFREKVRKQLWFLNKKEKQLLEHTFEQNNASFNNAEQKFMKPTRFANQFLQVHIFRNKHFSNGYFFLLIILFVLTYILLLGWFLAGFIASLAVVNQFINPKAELSLIYLVLILVFAIISLVVSLYLIRFVTALFTKRLLEYKFNEKKSSY persistent 154 Staphylococcal protein WP_017176365.1 UPI0002D31179 UniRef100_A0A3S7H0Q6,UniRef50_Q49YK8,UniRef90_A0A974QMK0 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 43853 44299 . - . GCA_005502385.1_00076_gene GCA_005502385.1_00076 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MLPHNTFDLLYIQTLEGSTIQTKCCFKTYDMILPFHIKKIVIYYLEQFNKSYTQQLKLAKRLLSINKLVPIYISKDVILFPIKHQRAPIQIYFNAQRIIGLTSSQNKTIITFDNSAQCVVDEPYILVYKKWQESILLAYLINKTTSFH . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 43853 44299 . - . GCA_005502385.1_00076_mRNA GCA_005502385.1_00076 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MLPHNTFDLLYIQTLEGSTIQTKCCFKTYDMILPFHIKKIVIYYLEQFNKSYTQQLKLAKRLLSINKLVPIYISKDVILFPIKHQRAPIQIYFNAQRIIGLTSSQNKTIITFDNSAQCVVDEPYILVYKKWQESILLAYLINKTTSFH . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 43853 44299 . - 0 GCA_005502385.1_00076 GCA_005502385.1_00076_gene,GCA_005502385.1_00076_mRNA GCA_005502385.1_00076 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MLPHNTFDLLYIQTLEGSTIQTKCCFKTYDMILPFHIKKIVIYYLEQFNKSYTQQLKLAKRLLSINKLVPIYISKDVILFPIKHQRAPIQIYFNAQRIIGLTSSQNKTIITFDNSAQCVVDEPYILVYKKWQESILLAYLINKTTSFH persistent 148 comK Competence protein ComK WP_017176364.1 UPI0002D8749F UniRef100_A0A3S7GX30,UniRef50_A0A2A1K739,UniRef90_A0A657M1K1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 44286 44549 . - . GCA_005502385.1_00077_gene GCA_005502385.1_00077 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKIDCLDIAALNHSLTYTLKDESFFNDFKYILNSNEYQWLIYYLRGYKQYEIAKKMNVSDTTIKKYKSSARIKLQQYYLEGDWHVTS . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 44286 44549 . - . GCA_005502385.1_00077_mRNA GCA_005502385.1_00077 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKIDCLDIAALNHSLTYTLKDESFFNDFKYILNSNEYQWLIYYLRGYKQYEIAKKMNVSDTTIKKYKSSARIKLQQYYLEGDWHVTS . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 44286 44549 . - 0 GCA_005502385.1_00077 GCA_005502385.1_00077_gene,GCA_005502385.1_00077_mRNA GCA_005502385.1_00077 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKIDCLDIAALNHSLTYTLKDESFFNDFKYILNSNEYQWLIYYLRGYKQYEIAKKMNVSDTTIKKYKSSARIKLQQYYLEGDWHVTS persistent 87 hypothetical protein . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 44980 45204 . + . GCA_005502385.1_00078_gene GCA_005502385.1_00078 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MDYAHLNLEHFFARHDDLDVIRDRSEFVMINNFTNEMMYRDGDIEGTIDLNQYYYKNRSQAVSFIMMDYKRNNE . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 44980 45204 . + . GCA_005502385.1_00078_mRNA GCA_005502385.1_00078 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MDYAHLNLEHFFARHDDLDVIRDRSEFVMINNFTNEMMYRDGDIEGTIDLNQYYYKNRSQAVSFIMMDYKRNNE . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 44980 45204 . + 0 GCA_005502385.1_00078 GCA_005502385.1_00078_gene,GCA_005502385.1_00078_mRNA GCA_005502385.1_00078 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MDYAHLNLEHFFARHDDLDVIRDRSEFVMINNFTNEMMYRDGDIEGTIDLNQYYYKNRSQAVSFIMMDYKRNNE persistent 74 Staphylococcal protein WP_002449634.1 UPI00019FCE86 UniRef100_A0A4Q9WNF6,UniRef50_Q2FXF3,UniRef90_Q5HND8 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 45451 46299 . + . GCA_005502385.1_00079_gene GCA_005502385.1_00079 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTKHRKGSIIGLIGLLIILVAAGFIFFSMISDQIFFKKVNEVEKVQHVNVTLDKAAAKQIDNYTSQQVSNKNNNAWRDASASEIKGAMDSSKFIDDDKQKYQFLDLSKYQGIDKNRIKRMLFDRPTLLKHTDAFVNAAKEKHVNEVYLISHALLETGSVKSELANGVNIDGKKYYNFYGVGALDEDPIKTGAEYAKKHGWDTPEKAIKGGADFIHKHFLSHDDQNTLYSMRWNPMNPGEHQYATDIKWAESNAEIIADFYKEMKTEGKYFKLYVYKDDQKHQ . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 45451 46299 . + . GCA_005502385.1_00079_mRNA GCA_005502385.1_00079 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTKHRKGSIIGLIGLLIILVAAGFIFFSMISDQIFFKKVNEVEKVQHVNVTLDKAAAKQIDNYTSQQVSNKNNNAWRDASASEIKGAMDSSKFIDDDKQKYQFLDLSKYQGIDKNRIKRMLFDRPTLLKHTDAFVNAAKEKHVNEVYLISHALLETGSVKSELANGVNIDGKKYYNFYGVGALDEDPIKTGAEYAKKHGWDTPEKAIKGGADFIHKHFLSHDDQNTLYSMRWNPMNPGEHQYATDIKWAESNAEIIADFYKEMKTEGKYFKLYVYKDDQKHQ . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 45451 46299 . + 0 GCA_005502385.1_00079 GCA_005502385.1_00079_gene,GCA_005502385.1_00079_mRNA GCA_005502385.1_00079 hypothetical protein """""" GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTKHRKGSIIGLIGLLIILVAAGFIFFSMISDQIFFKKVNEVEKVQHVNVTLDKAAAKQIDNYTSQQVSNKNNNAWRDASASEIKGAMDSSKFIDDDKQKYQFLDLSKYQGIDKNRIKRMLFDRPTLLKHTDAFVNAAKEKHVNEVYLISHALLETGSVKSELANGVNIDGKKYYNFYGVGALDEDPIKTGAEYAKKHGWDTPEKAIKGGADFIHKHFLSHDDQNTLYSMRWNPMNPGEHQYATDIKWAESNAEIIADFYKEMKTEGKYFKLYVYKDDQKHQ persistent 282 lytD Autolysin COG4193,G WP_037541107.1 UPI00044B7435 UniRef100_UPI00044B7435,UniRef50_Q2FXF4,UniRef90_A0A2A1K9G6 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 46595 48082 . + . GCA_005502385.1_00080_gene GCA_005502385.1_00080 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MRVAIIGMGTAGVSVLRQLVKHKDFKQLKVDVYDNEFNMGQGVPFQNDSSQLLINLPTKKMSLNLDDDEEFWKWYQTQSDFTFKNPKYLPRFVFGHYMKSYLSNYETLYDNLTVIKQPVQEVFINSNIDETTLKYYVCTSKDMKHCQVYDYIFLTIGTLSYHDPYYLKGIKGYIQTPYPTYNTLDDVQESDDIAIIGTGLASLDVVRYVAFHHPKLPITMTSRSAQLPSVRGNMKKIEFQCLTKSKFNDIKDKYFGNVPLEKAFDLFKEECDLNGIDLQKLVHRRTGDTIKDLNYDLEHPDEIGIFQTLIENVKENLNWIWNSFSRQDQIEFDKRFTKIIQLNSNPMPPRTAKLIKQLIKDGSLVIRKDLENVVHKNGLFNLKFKNDEQWYPHHIIINATGSKTHLKDLDEDDQFILNLQNRQIVQAHPMGGIQIIPETNQVISPRYGTLNNMIAIGQITNGVNKLRNGVKMIVNQAVSAVDYLYEIRKEFDHTV . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 46595 48082 . + . GCA_005502385.1_00080_mRNA GCA_005502385.1_00080 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MRVAIIGMGTAGVSVLRQLVKHKDFKQLKVDVYDNEFNMGQGVPFQNDSSQLLINLPTKKMSLNLDDDEEFWKWYQTQSDFTFKNPKYLPRFVFGHYMKSYLSNYETLYDNLTVIKQPVQEVFINSNIDETTLKYYVCTSKDMKHCQVYDYIFLTIGTLSYHDPYYLKGIKGYIQTPYPTYNTLDDVQESDDIAIIGTGLASLDVVRYVAFHHPKLPITMTSRSAQLPSVRGNMKKIEFQCLTKSKFNDIKDKYFGNVPLEKAFDLFKEECDLNGIDLQKLVHRRTGDTIKDLNYDLEHPDEIGIFQTLIENVKENLNWIWNSFSRQDQIEFDKRFTKIIQLNSNPMPPRTAKLIKQLIKDGSLVIRKDLENVVHKNGLFNLKFKNDEQWYPHHIIINATGSKTHLKDLDEDDQFILNLQNRQIVQAHPMGGIQIIPETNQVISPRYGTLNNMIAIGQITNGVNKLRNGVKMIVNQAVSAVDYLYEIRKEFDHTV . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 46595 48082 . + 0 GCA_005502385.1_00080 GCA_005502385.1_00080_gene,GCA_005502385.1_00080_mRNA GCA_005502385.1_00080 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MRVAIIGMGTAGVSVLRQLVKHKDFKQLKVDVYDNEFNMGQGVPFQNDSSQLLINLPTKKMSLNLDDDEEFWKWYQTQSDFTFKNPKYLPRFVFGHYMKSYLSNYETLYDNLTVIKQPVQEVFINSNIDETTLKYYVCTSKDMKHCQVYDYIFLTIGTLSYHDPYYLKGIKGYIQTPYPTYNTLDDVQESDDIAIIGTGLASLDVVRYVAFHHPKLPITMTSRSAQLPSVRGNMKKIEFQCLTKSKFNDIKDKYFGNVPLEKAFDLFKEECDLNGIDLQKLVHRRTGDTIKDLNYDLEHPDEIGIFQTLIENVKENLNWIWNSFSRQDQIEFDKRFTKIIQLNSNPMPPRTAKLIKQLIKDGSLVIRKDLENVVHKNGLFNLKFKNDEQWYPHHIIINATGSKTHLKDLDEDDQFILNLQNRQIVQAHPMGGIQIIPETNQVISPRYGTLNNMIAIGQITNGVNKLRNGVKMIVNQAVSAVDYLYEIRKEFDHTV persistent 495 FAD/NAD(P)-binding protein WP_070517281.1 UPI0008A34915 UniRef100_UPI0008A34915,UniRef50_S2XMM3,UniRef90_A0A3S7GXN4 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 48233 48368 . + . GCA_005502385.1_00081_gene GCA_005502385.1_00081 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 48233 48368 . + . GCA_005502385.1_00081_mRNA GCA_005502385.1_00081 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Infernal:001001 misc_RNA 48233 48368 118.2 + . GCA_005502385.1_00081 GCA_005502385.1_00081_gene,GCA_005502385.1_00081_mRNA GCA_005502385.1_00081 FMN GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 48448 49533 . + . GCA_005502385.1_00082_gene GCA_005502385.1_00082 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MPVKQVWGFFRGDKLSEFMKYAIQLAQMVKGQTGVNPPVGSVVVKDGRIVGLGAHLKQGEKHAEVQALDMAQDKAKGGTIYISLEPCTHYGSTPPCVNKIIEHGLSKVIYAVKDTTLSSEGDIILEKAGIEVEYQYSEEAFALYEDFFKAKQHKIPEITVKVSTSLDGKQATDSGQSQWITNKAVKQDVYRLRHTHDAVLTGNGTLEADNPQYTTRIQDGKHPIRIILSKRGQIDYSKQIFHDQLSEIWIYTENHELKSPSHHIKIIYLETCNLKSILSDIYQRGVGRLLVEAGPHITSEFLQSNYLDHLIIYYAPKIIGGIGKNQFYQTDNVIDLANAPQFEVISTESIQQNIKMTLRKK . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 48448 49533 . + . GCA_005502385.1_00082_mRNA GCA_005502385.1_00082 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MPVKQVWGFFRGDKLSEFMKYAIQLAQMVKGQTGVNPPVGSVVVKDGRIVGLGAHLKQGEKHAEVQALDMAQDKAKGGTIYISLEPCTHYGSTPPCVNKIIEHGLSKVIYAVKDTTLSSEGDIILEKAGIEVEYQYSEEAFALYEDFFKAKQHKIPEITVKVSTSLDGKQATDSGQSQWITNKAVKQDVYRLRHTHDAVLTGNGTLEADNPQYTTRIQDGKHPIRIILSKRGQIDYSKQIFHDQLSEIWIYTENHELKSPSHHIKIIYLETCNLKSILSDIYQRGVGRLLVEAGPHITSEFLQSNYLDHLIIYYAPKIIGGIGKNQFYQTDNVIDLANAPQFEVISTESIQQNIKMTLRKK . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 48448 49533 . + 0 GCA_005502385.1_00082 GCA_005502385.1_00082_gene,GCA_005502385.1_00082_mRNA GCA_005502385.1_00082 Riboflavin biosynthesis protein RibD GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MPVKQVWGFFRGDKLSEFMKYAIQLAQMVKGQTGVNPPVGSVVVKDGRIVGLGAHLKQGEKHAEVQALDMAQDKAKGGTIYISLEPCTHYGSTPPCVNKIIEHGLSKVIYAVKDTTLSSEGDIILEKAGIEVEYQYSEEAFALYEDFFKAKQHKIPEITVKVSTSLDGKQATDSGQSQWITNKAVKQDVYRLRHTHDAVLTGNGTLEADNPQYTTRIQDGKHPIRIILSKRGQIDYSKQIFHDQLSEIWIYTENHELKSPSHHIKIIYLETCNLKSILSDIYQRGVGRLLVEAGPHITSEFLQSNYLDHLIIYYAPKIIGGIGKNQFYQTDNVIDLANAPQFEVISTESIQQNIKMTLRKK persistent 361 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD 1.1.1.193,3.5.4.26 GO:0008703,GO:0008835 UniRef50_A0A3S7GXG8,UniRef90_A0A3S7GXG8 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 49540 50172 . + . GCA_005502385.1_00083_gene GCA_005502385.1_00083 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MFTGIVEEIGTVKRIRTQQSVRTLDISCQKIIEDMHIGDSISVNGACLTVIDFKQNQFSVQVIKGTENKTYLANIKENDEVNLERAMSGSGRFGGHFVLGHVDAKGTIINIRETPNSRIVSIKASDSVIKQMVKQGSITVDGVSLTIFDLHQHSFDIHLIPETRRSTILSNKKMGDEVHLETDVLFKYVESIVGKNKSDLSVDKLKAYGF . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 49540 50172 . + . GCA_005502385.1_00083_mRNA GCA_005502385.1_00083 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MFTGIVEEIGTVKRIRTQQSVRTLDISCQKIIEDMHIGDSISVNGACLTVIDFKQNQFSVQVIKGTENKTYLANIKENDEVNLERAMSGSGRFGGHFVLGHVDAKGTIINIRETPNSRIVSIKASDSVIKQMVKQGSITVDGVSLTIFDLHQHSFDIHLIPETRRSTILSNKKMGDEVHLETDVLFKYVESIVGKNKSDLSVDKLKAYGF . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 49540 50172 . + 0 GCA_005502385.1_00083 GCA_005502385.1_00083_gene,GCA_005502385.1_00083_mRNA GCA_005502385.1_00083 Riboflavin synthase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MFTGIVEEIGTVKRIRTQQSVRTLDISCQKIIEDMHIGDSISVNGACLTVIDFKQNQFSVQVIKGTENKTYLANIKENDEVNLERAMSGSGRFGGHFVLGHVDAKGTIINIRETPNSRIVSIKASDSVIKQMVKQGSITVDGVSLTIFDLHQHSFDIHLIPETRRSTILSNKKMGDEVHLETDVLFKYVESIVGKNKSDLSVDKLKAYGF persistent 210 ribE riboflavin synthase 2.5.1.9 GO:0004746 WP_017176359.1 UPI0002DFFF07 UniRef100_A0A4Q9WPS5,UniRef50_B9DN31,UniRef90_A0A657M1L1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 50184 51368 . + . GCA_005502385.1_00084_gene GCA_005502385.1_00084 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKFDSIEEALEALRNGDSIIVVDDEDRENEGDLIAVTQWMKDDTINYMAKEARGLICAPISSQIAERLNLKTMVDGNTDEYGTNFTVSIDHISTTTGISAFDRTATAKALINPDSKPESFHKPGHLFPLVSKEKGVLVRPGHTEAAVDLAKLTGAAPAGVICEIMNDDGTMAKGNELQQFKERHQLKMITIESLINYRRKQESEGIELKATVKMPTDIGDFKMYGFQSQYTHEDIVVLGKGEPRTTENVRLHSACLTGDIFHSQRCDCGAQLEASMKYINDHGGLIIYLPQEGRGIGLMNKLKAYELIEQGHDTVTANLALGFDEDLRDYHIAAQILKYFNVQQVNLLSNNPKKFEGLKDYGIKVADRTEIIVPETEHNHHYMETKKLKMGHLI . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 50184 51368 . + . GCA_005502385.1_00084_mRNA GCA_005502385.1_00084 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKFDSIEEALEALRNGDSIIVVDDEDRENEGDLIAVTQWMKDDTINYMAKEARGLICAPISSQIAERLNLKTMVDGNTDEYGTNFTVSIDHISTTTGISAFDRTATAKALINPDSKPESFHKPGHLFPLVSKEKGVLVRPGHTEAAVDLAKLTGAAPAGVICEIMNDDGTMAKGNELQQFKERHQLKMITIESLINYRRKQESEGIELKATVKMPTDIGDFKMYGFQSQYTHEDIVVLGKGEPRTTENVRLHSACLTGDIFHSQRCDCGAQLEASMKYINDHGGLIIYLPQEGRGIGLMNKLKAYELIEQGHDTVTANLALGFDEDLRDYHIAAQILKYFNVQQVNLLSNNPKKFEGLKDYGIKVADRTEIIVPETEHNHHYMETKKLKMGHLI . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 50184 51368 . + 0 GCA_005502385.1_00084 GCA_005502385.1_00084_gene,GCA_005502385.1_00084_mRNA GCA_005502385.1_00084 Riboflavin biosynthesis protein RibBA GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKFDSIEEALEALRNGDSIIVVDDEDRENEGDLIAVTQWMKDDTINYMAKEARGLICAPISSQIAERLNLKTMVDGNTDEYGTNFTVSIDHISTTTGISAFDRTATAKALINPDSKPESFHKPGHLFPLVSKEKGVLVRPGHTEAAVDLAKLTGAAPAGVICEIMNDDGTMAKGNELQQFKERHQLKMITIESLINYRRKQESEGIELKATVKMPTDIGDFKMYGFQSQYTHEDIVVLGKGEPRTTENVRLHSACLTGDIFHSQRCDCGAQLEASMKYINDHGGLIIYLPQEGRGIGLMNKLKAYELIEQGHDTVTANLALGFDEDLRDYHIAAQILKYFNVQQVNLLSNNPKKFEGLKDYGIKVADRTEIIVPETEHNHHYMETKKLKMGHLI persistent 394 Riboflavin biosynthesis protein RibBA WP_054105679.1 UPI0006B9864D UniRef100_UPI0006B9864D,UniRef50_Q4L7B1,UniRef90_A0A6N0I4K6 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 51381 51839 . + . GCA_005502385.1_00085_gene GCA_005502385.1_00085 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNFEGKLVGTNLKVAIVVSRFNDFITNRLLDGAKDTLVRHGVDEDNIDVAYVPGAFEIPLVAKKLAQKNDYDAVITLGCVIRGATSHYDYVCNEVAKGVSKANDVTNTPVIFGVLTTESIEQAVERAGTKAGNKGAEAAVSAIEMANLLKQF . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 51381 51839 . + . GCA_005502385.1_00085_mRNA GCA_005502385.1_00085 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNFEGKLVGTNLKVAIVVSRFNDFITNRLLDGAKDTLVRHGVDEDNIDVAYVPGAFEIPLVAKKLAQKNDYDAVITLGCVIRGATSHYDYVCNEVAKGVSKANDVTNTPVIFGVLTTESIEQAVERAGTKAGNKGAEAAVSAIEMANLLKQF . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 51381 51839 . + 0 GCA_005502385.1_00085 GCA_005502385.1_00085_gene,GCA_005502385.1_00085_mRNA GCA_005502385.1_00085 6%2C7-dimethyl-8-ribityllumazine synthase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNFEGKLVGTNLKVAIVVSRFNDFITNRLLDGAKDTLVRHGVDEDNIDVAYVPGAFEIPLVAKKLAQKNDYDAVITLGCVIRGATSHYDYVCNEVAKGVSKANDVTNTPVIFGVLTTESIEQAVERAGTKAGNKGAEAAVSAIEMANLLKQF persistent 152 ribE 6,7-dimethyl-8-ribityllumazine synthase 2.5.1.78 GO:0000906,GO:0009349 WP_002455177.1 UPI0001EF51A2 UniRef100_A0A8X8GQM8,UniRef50_P66041,UniRef90_A0A8X8GQM8 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 51891 52892 . - . GCA_005502385.1_00086_gene GCA_005502385.1_00086 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSLFRDFFITLSNITYLNEMAKKIGPTMGANRVVAGNTIEQLIDTIERLNAKHIDVTVDNLGEFVNTKAAATQAKNEILEIMEAINKYQVSAHMSVKVSSLGGEFDTELAYQNLRDILLKANTYDNMHINIDMEKYNSLSQTLQILDRLKGEFRNVGTVIQGYLYDAEKLIDKYPELRLRLVKGAYKEKDTIAYQSKKDIDKNYINIIEKRLLNAKNFTSIATHDDKIINHVKQFVKDHHIEKSTFEFQMLYGFRNELAEEIARQGYHFTVYVPYGNDWFAYFMRRLAERPQNLSLAYQEFISTEALKKIGLVSGLALGTLTLVSSIVKLLKR . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 51891 52892 . - . GCA_005502385.1_00086_mRNA GCA_005502385.1_00086 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSLFRDFFITLSNITYLNEMAKKIGPTMGANRVVAGNTIEQLIDTIERLNAKHIDVTVDNLGEFVNTKAAATQAKNEILEIMEAINKYQVSAHMSVKVSSLGGEFDTELAYQNLRDILLKANTYDNMHINIDMEKYNSLSQTLQILDRLKGEFRNVGTVIQGYLYDAEKLIDKYPELRLRLVKGAYKEKDTIAYQSKKDIDKNYINIIEKRLLNAKNFTSIATHDDKIINHVKQFVKDHHIEKSTFEFQMLYGFRNELAEEIARQGYHFTVYVPYGNDWFAYFMRRLAERPQNLSLAYQEFISTEALKKIGLVSGLALGTLTLVSSIVKLLKR . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 51891 52892 . - 0 GCA_005502385.1_00086 GCA_005502385.1_00086_gene,GCA_005502385.1_00086_mRNA GCA_005502385.1_00086 Proline dehydrogenase 2 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSLFRDFFITLSNITYLNEMAKKIGPTMGANRVVAGNTIEQLIDTIERLNAKHIDVTVDNLGEFVNTKAAATQAKNEILEIMEAINKYQVSAHMSVKVSSLGGEFDTELAYQNLRDILLKANTYDNMHINIDMEKYNSLSQTLQILDRLKGEFRNVGTVIQGYLYDAEKLIDKYPELRLRLVKGAYKEKDTIAYQSKKDIDKNYINIIEKRLLNAKNFTSIATHDDKIINHVKQFVKDHHIEKSTFEFQMLYGFRNELAEEIARQGYHFTVYVPYGNDWFAYFMRRLAERPQNLSLAYQEFISTEALKKIGLVSGLALGTLTLVSSIVKLLKR persistent 333 proline dehydrogenase WP_048761780.1 UPI00065FCE06 UniRef100_UPI00065FCE06,UniRef50_A0A390ZXL9,UniRef90_A0A3S7H0Q9 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 53101 53928 . + . GCA_005502385.1_00087_gene GCA_005502385.1_00087 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MWKWETEHDAKGVIIIVHNMLEHTGRYAYVITMLRRNGYHVIMGDLPGQGQTSRANRGQLQRFEIYHEQLVEWIKIANEYKLPTFVMGVGLGGLIILNLLEKTELPIEGILLLSPMLEFKKNYKTRKNMFISNIGKSSKGTQFKLGIDYEDLTRNSEVINETNHDGLMLKKVSYKWFNIINETMKDTSQHIKDIKPLPTLLMYGTEDKILETSSIDILKQQFLADEFYFKAWKGFYHEIHNEPERDQVMRYILTFLNNSVNTMGFIVQEEDIEEV . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 53101 53928 . + . GCA_005502385.1_00087_mRNA GCA_005502385.1_00087 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MWKWETEHDAKGVIIIVHNMLEHTGRYAYVITMLRRNGYHVIMGDLPGQGQTSRANRGQLQRFEIYHEQLVEWIKIANEYKLPTFVMGVGLGGLIILNLLEKTELPIEGILLLSPMLEFKKNYKTRKNMFISNIGKSSKGTQFKLGIDYEDLTRNSEVINETNHDGLMLKKVSYKWFNIINETMKDTSQHIKDIKPLPTLLMYGTEDKILETSSIDILKQQFLADEFYFKAWKGFYHEIHNEPERDQVMRYILTFLNNSVNTMGFIVQEEDIEEV . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 53101 53928 . + 0 GCA_005502385.1_00087 GCA_005502385.1_00087_gene,GCA_005502385.1_00087_mRNA GCA_005502385.1_00087 Phospholipase YtpA GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MWKWETEHDAKGVIIIVHNMLEHTGRYAYVITMLRRNGYHVIMGDLPGQGQTSRANRGQLQRFEIYHEQLVEWIKIANEYKLPTFVMGVGLGGLIILNLLEKTELPIEGILLLSPMLEFKKNYKTRKNMFISNIGKSSKGTQFKLGIDYEDLTRNSEVINETNHDGLMLKKVSYKWFNIINETMKDTSQHIKDIKPLPTLLMYGTEDKILETSSIDILKQQFLADEFYFKAWKGFYHEIHNEPERDQVMRYILTFLNNSVNTMGFIVQEEDIEEV persistent 275 Alpha/beta hydrolase WP_017176356.1 UPI0002ECFC70 UniRef100_A0A4Q9WMP4,UniRef50_A0A380G5L2,UniRef90_A0A4Q9WMP4 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 54225 54626 . + . GCA_005502385.1_00088_gene GCA_005502385.1_00088 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKLQKKETVSMVLKLEKLLKDIDSIFRIIYEKYHLNKEEVLILLTLWEKGPMTLKEMDQYVNIKSYKRTRTYNNLVQSDWVYKERPIDDERTVIIHFNEEKNKYRNELLDFITTIIKRKYESLENSLNSLMSV . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 54225 54626 . + . GCA_005502385.1_00088_mRNA GCA_005502385.1_00088 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKLQKKETVSMVLKLEKLLKDIDSIFRIIYEKYHLNKEEVLILLTLWEKGPMTLKEMDQYVNIKSYKRTRTYNNLVQSDWVYKERPIDDERTVIIHFNEEKNKYRNELLDFITTIIKRKYESLENSLNSLMSV . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 54225 54626 . + 0 GCA_005502385.1_00088 GCA_005502385.1_00088_gene,GCA_005502385.1_00088_mRNA GCA_005502385.1_00088 HTH-type transcriptional regulator rot GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKLQKKETVSMVLKLEKLLKDIDSIFRIIYEKYHLNKEEVLILLTLWEKGPMTLKEMDQYVNIKSYKRTRTYNNLVQSDWVYKERPIDDERTVIIHFNEEKNKYRNELLDFITTIIKRKYESLENSLNSLMSV persistent 133 marR MarR family transcriptional regulator WP_002449620.1 UPI00019FCE8F UniRef100_A0A1J6DXT7,UniRef50_Q9RFJ6,UniRef90_A0A1J6DXT7 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 54687 55247 . - . GCA_005502385.1_00089_gene GCA_005502385.1_00089 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKLERILPFAKTLIKQHIQEDSIVIDATCGNGHDTLFLAKQVPNGKVFGFDIQKEAIEHTKEKIAPFKHVTLIHDGHENILNDIPSDIIGNVDAAIFNLGYLPKGDKSIVTKPETTIQAIESIFKLLSTEGIIVLVIYHGHEEGQIERDELLKYLENFDQSKAHILKYQFINQVNHAPFICAIEKR . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 54687 55247 . - . GCA_005502385.1_00089_mRNA GCA_005502385.1_00089 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKLERILPFAKTLIKQHIQEDSIVIDATCGNGHDTLFLAKQVPNGKVFGFDIQKEAIEHTKEKIAPFKHVTLIHDGHENILNDIPSDIIGNVDAAIFNLGYLPKGDKSIVTKPETTIQAIESIFKLLSTEGIIVLVIYHGHEEGQIERDELLKYLENFDQSKAHILKYQFINQVNHAPFICAIEKR . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 54687 55247 . - 0 GCA_005502385.1_00089 GCA_005502385.1_00089_gene,GCA_005502385.1_00089_mRNA GCA_005502385.1_00089 Ribosomal RNA small subunit methyltransferase H GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MKLERILPFAKTLIKQHIQEDSIVIDATCGNGHDTLFLAKQVPNGKVFGFDIQKEAIEHTKEKIAPFKHVTLIHDGHENILNDIPSDIIGNVDAAIFNLGYLPKGDKSIVTKPETTIQAIESIFKLLSTEGIIVLVIYHGHEEGQIERDELLKYLENFDQSKAHILKYQFINQVNHAPFICAIEKR persistent 186 Methyltransferase domain-containing protein WP_017176355.1 UPI0002D30FB5 UniRef100_A0A3S7H0B7,UniRef50_A0A6V7RGS4,UniRef90_A0A6N0I4F4 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 55244 56203 . - . GCA_005502385.1_00090_gene GCA_005502385.1_00090 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MGKYFPYAFENKRYHTWNYHLKNKFGQKIFKVALDGGFDCPNRDGTVAHGGCTFCSAAGSGDFAGNRADPIEVQFQQIKERMHEKWSEGKYIAYFQAFTNTHAPVEVLKEKYEPVLKEEGVIGLSIATRPDCLPDDVVEYLAELNQRTYLWVELGLQTVHQKTSDLINRAHDMQTYYEGVAKLRKHNINVCTHIINGLPGEDYHMMMETAREVAQMDVQGIKIHLLHLLKGTPMVKQYEKGMLEFMTQEDYTNLVCDQLEILPPDMIIHRITGDGPIDLMVGPMWSVNKWEVLNEIDDELARRESYQGKFYTSNTKVNS . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 55244 56203 . - . GCA_005502385.1_00090_mRNA GCA_005502385.1_00090 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MGKYFPYAFENKRYHTWNYHLKNKFGQKIFKVALDGGFDCPNRDGTVAHGGCTFCSAAGSGDFAGNRADPIEVQFQQIKERMHEKWSEGKYIAYFQAFTNTHAPVEVLKEKYEPVLKEEGVIGLSIATRPDCLPDDVVEYLAELNQRTYLWVELGLQTVHQKTSDLINRAHDMQTYYEGVAKLRKHNINVCTHIINGLPGEDYHMMMETAREVAQMDVQGIKIHLLHLLKGTPMVKQYEKGMLEFMTQEDYTNLVCDQLEILPPDMIIHRITGDGPIDLMVGPMWSVNKWEVLNEIDDELARRESYQGKFYTSNTKVNS . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 55244 56203 . - 0 GCA_005502385.1_00090 GCA_005502385.1_00090_gene,GCA_005502385.1_00090_mRNA GCA_005502385.1_00090 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MGKYFPYAFENKRYHTWNYHLKNKFGQKIFKVALDGGFDCPNRDGTVAHGGCTFCSAAGSGDFAGNRADPIEVQFQQIKERMHEKWSEGKYIAYFQAFTNTHAPVEVLKEKYEPVLKEEGVIGLSIATRPDCLPDDVVEYLAELNQRTYLWVELGLQTVHQKTSDLINRAHDMQTYYEGVAKLRKHNINVCTHIINGLPGEDYHMMMETAREVAQMDVQGIKIHLLHLLKGTPMVKQYEKGMLEFMTQEDYTNLVCDQLEILPPDMIIHRITGDGPIDLMVGPMWSVNKWEVLNEIDDELARRESYQGKFYTSNTKVNS persistent 319 yhcC TIGR01212 family radical SAM protein GO:0051536,GO:1904047 COG1242,R WP_017176354.1 UPI0002FF86EF UniRef100_A0A1L8Y6I7,UniRef50_O35008,UniRef90_Q5HNE9 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 56315 57499 . + . GCA_005502385.1_00091_gene GCA_005502385.1_00091 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNIPRSVWWLVIGMALNITGSSFLWPLNTIYMKEELGKSLTVSGIVLMINSFGMVVGNLLGGTLFDKLGGYRTIMIGTITCLLSTTLLNFFHGWPWYAVWLVLLGFGGGMIVPAIYAMAGAVWPNGGRTTFNAIYLAQNIGVATGAAMGGFVAEFSFNFIFLANLIMYVLFGIVAFTQFNLEYHAKVKSPDSLDIQSKENKKRFIALILLCAMFSICWIGYIQWETTIASFTQQINISMSQYSVLWTVNGIMILVAQPLIRPVIRLLKGNLKYQMFVGILIFMLSFFVTSFAEQFTVFLIGMIILTFGEMFVWPAVPTIANYLAPQGKQGQYQGVVNSASTVGKAFGPLIGGILVDTFNMSAMFIGMIILLLIGMFFLSIFDKGLPKQSQHENR . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 56315 57499 . + . GCA_005502385.1_00091_mRNA GCA_005502385.1_00091 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNIPRSVWWLVIGMALNITGSSFLWPLNTIYMKEELGKSLTVSGIVLMINSFGMVVGNLLGGTLFDKLGGYRTIMIGTITCLLSTTLLNFFHGWPWYAVWLVLLGFGGGMIVPAIYAMAGAVWPNGGRTTFNAIYLAQNIGVATGAAMGGFVAEFSFNFIFLANLIMYVLFGIVAFTQFNLEYHAKVKSPDSLDIQSKENKKRFIALILLCAMFSICWIGYIQWETTIASFTQQINISMSQYSVLWTVNGIMILVAQPLIRPVIRLLKGNLKYQMFVGILIFMLSFFVTSFAEQFTVFLIGMIILTFGEMFVWPAVPTIANYLAPQGKQGQYQGVVNSASTVGKAFGPLIGGILVDTFNMSAMFIGMIILLLIGMFFLSIFDKGLPKQSQHENR . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 56315 57499 . + 0 GCA_005502385.1_00091 GCA_005502385.1_00091_gene,GCA_005502385.1_00091_mRNA GCA_005502385.1_00091 Na(+)%2C Li(+)%2C K(+)/H(+) antiporter GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNIPRSVWWLVIGMALNITGSSFLWPLNTIYMKEELGKSLTVSGIVLMINSFGMVVGNLLGGTLFDKLGGYRTIMIGTITCLLSTTLLNFFHGWPWYAVWLVLLGFGGGMIVPAIYAMAGAVWPNGGRTTFNAIYLAQNIGVATGAAMGGFVAEFSFNFIFLANLIMYVLFGIVAFTQFNLEYHAKVKSPDSLDIQSKENKKRFIALILLCAMFSICWIGYIQWETTIASFTQQINISMSQYSVLWTVNGIMILVAQPLIRPVIRLLKGNLKYQMFVGILIFMLSFFVTSFAEQFTVFLIGMIILTFGEMFVWPAVPTIANYLAPQGKQGQYQGVVNSASTVGKAFGPLIGGILVDTFNMSAMFIGMIILLLIGMFFLSIFDKGLPKQSQHENR persistent 394 MFS transporter WP_049379360.1 UPI00066E1073 UniRef100_UPI00066E1073,UniRef50_Q2FXH1,UniRef90_A0A3S7GXP5 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 57566 57756 . + . GCA_005502385.1_00092_gene GCA_005502385.1_00092 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 57566 57756 . + . GCA_005502385.1_00092_mRNA GCA_005502385.1_00092 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 Infernal:001001 misc_RNA 57566 57756 100.3 + . GCA_005502385.1_00092 GCA_005502385.1_00092_gene,GCA_005502385.1_00092_mRNA GCA_005502385.1_00092 T-box GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 57804 60218 . + . GCA_005502385.1_00093_gene GCA_005502385.1_00093 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MGYNHKEIEQKWQNYWAENKTFKASDNLGQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYALDTGNDPREFTKKNVQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAYVDKVAVNWCPALGTVLSNEEVVDGVSERGGHPVYRRPMKQWVLKITEYADRLLEDLDELDWPESIKDMQRNWIGRSEGARVSFNVENTNDTIDVFTTRPDTIYGTTFLVLSPEHALVNEMTTDDKKEMVKQYQEEASKKSDLERTDLAKDKSGVFTGAYAINPLSGKKLPIWIADYVLSTYGTGAVMAVPGHDERDHEFAKKFDLPIIEVIEGGNVQEEAYTGEGAHINSGELDGLDNKEAISKAITLLEAKGAGEKKVNYKLRDWLFSRQRYWGEPIPVIHWEDGTMTTVPEEELPLLLPETDQIKPSGTGESPLANIDDFVNVVDEKTGMKGRRETNTMPQWAGSCWYYLRYIDPHNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYSRFWHKVLYDLGVVPTKEPFQKLFNQGMILGEGNEKMSKSKGNVVNPDDIVASHGADTLRLYEMFMGPLDAAIAWSENGLDGSRRFLDRVWRLFINEDGSLSNKIVENNDNSLDKVYNQTVKKVTEDFDTLNFNTAISQLMVFINDCYKANNIYKPYVEGFVKMLAPIAPHVSEELWQRLGNQETITYQPWPTYNASLLVDDEIEIVVQVNGKVRAKINIPKDLSKEDMQELALQNENVKLSIEGKEIKKVIVVPQKLVNIVAK . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 57804 60218 . + . GCA_005502385.1_00093_mRNA GCA_005502385.1_00093 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MGYNHKEIEQKWQNYWAENKTFKASDNLGQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYALDTGNDPREFTKKNVQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAYVDKVAVNWCPALGTVLSNEEVVDGVSERGGHPVYRRPMKQWVLKITEYADRLLEDLDELDWPESIKDMQRNWIGRSEGARVSFNVENTNDTIDVFTTRPDTIYGTTFLVLSPEHALVNEMTTDDKKEMVKQYQEEASKKSDLERTDLAKDKSGVFTGAYAINPLSGKKLPIWIADYVLSTYGTGAVMAVPGHDERDHEFAKKFDLPIIEVIEGGNVQEEAYTGEGAHINSGELDGLDNKEAISKAITLLEAKGAGEKKVNYKLRDWLFSRQRYWGEPIPVIHWEDGTMTTVPEEELPLLLPETDQIKPSGTGESPLANIDDFVNVVDEKTGMKGRRETNTMPQWAGSCWYYLRYIDPHNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYSRFWHKVLYDLGVVPTKEPFQKLFNQGMILGEGNEKMSKSKGNVVNPDDIVASHGADTLRLYEMFMGPLDAAIAWSENGLDGSRRFLDRVWRLFINEDGSLSNKIVENNDNSLDKVYNQTVKKVTEDFDTLNFNTAISQLMVFINDCYKANNIYKPYVEGFVKMLAPIAPHVSEELWQRLGNQETITYQPWPTYNASLLVDDEIEIVVQVNGKVRAKINIPKDLSKEDMQELALQNENVKLSIEGKEIKKVIVVPQKLVNIVAK . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 57804 60218 . + 0 GCA_005502385.1_00093 GCA_005502385.1_00093_gene,GCA_005502385.1_00093_mRNA GCA_005502385.1_00093 Leucine--tRNA ligase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MGYNHKEIEQKWQNYWAENKTFKASDNLGQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYALDTGNDPREFTKKNVQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAYVDKVAVNWCPALGTVLSNEEVVDGVSERGGHPVYRRPMKQWVLKITEYADRLLEDLDELDWPESIKDMQRNWIGRSEGARVSFNVENTNDTIDVFTTRPDTIYGTTFLVLSPEHALVNEMTTDDKKEMVKQYQEEASKKSDLERTDLAKDKSGVFTGAYAINPLSGKKLPIWIADYVLSTYGTGAVMAVPGHDERDHEFAKKFDLPIIEVIEGGNVQEEAYTGEGAHINSGELDGLDNKEAISKAITLLEAKGAGEKKVNYKLRDWLFSRQRYWGEPIPVIHWEDGTMTTVPEEELPLLLPETDQIKPSGTGESPLANIDDFVNVVDEKTGMKGRRETNTMPQWAGSCWYYLRYIDPHNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYSRFWHKVLYDLGVVPTKEPFQKLFNQGMILGEGNEKMSKSKGNVVNPDDIVASHGADTLRLYEMFMGPLDAAIAWSENGLDGSRRFLDRVWRLFINEDGSLSNKIVENNDNSLDKVYNQTVKKVTEDFDTLNFNTAISQLMVFINDCYKANNIYKPYVEGFVKMLAPIAPHVSEELWQRLGNQETITYQPWPTYNASLLVDDEIEIVVQVNGKVRAKINIPKDLSKEDMQELALQNENVKLSIEGKEIKKVIVVPQKLVNIVAK persistent 804 leuS leucine--tRNA ligase 6.1.1.4 GO:0000166,GO:0004823,GO:0005524,GO:0006429 UniRef50_A8FGG0,UniRef90_A0A380E5D6 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 60237 60548 . + . GCA_005502385.1_00094_gene GCA_005502385.1_00094 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MESITVDQLKEKILGSNPVNIIDVRTDEETAMGTIPGAKTIPMDQIADNLNQFNKNETYYIVCAAGVRSEKVANYLENEGIHAVNVEGGMQAWGDEGIEIDSI . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 60237 60548 . + . GCA_005502385.1_00094_mRNA GCA_005502385.1_00094 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MESITVDQLKEKILGSNPVNIIDVRTDEETAMGTIPGAKTIPMDQIADNLNQFNKNETYYIVCAAGVRSEKVANYLENEGIHAVNVEGGMQAWGDEGIEIDSI . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 60237 60548 . + 0 GCA_005502385.1_00094 GCA_005502385.1_00094_gene,GCA_005502385.1_00094_mRNA GCA_005502385.1_00094 Sulfurtransferase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MESITVDQLKEKILGSNPVNIIDVRTDEETAMGTIPGAKTIPMDQIADNLNQFNKNETYYIVCAAGVRSEKVANYLENEGIHAVNVEGGMQAWGDEGIEIDSI persistent 103 Rhodanese-like domain-containing protein WP_002449646.1 UPI00019FCE94 UniRef100_A0A657M1M4,UniRef50_A0A654B5B2,UniRef90_A0A657M1M4 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 60795 67895 . + . GCA_005502385.1_00095_gene GCA_005502385.1_00095 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNLFKKQKFSIRKFSVGTFSTLIATLVFLSHPGHAATHDAETNTSAPQTNESATINKQNTNIEQPHNETTSANTSNSNENNRNNESNTSSDYSINREREEGTVNNVINSTENNTNHNEKVTTNDVVSNENNHETTNVNQPHRRGKRSVDNTPSTTNTDPMAVNEQNTGQIINGTFTDNSQGATIPTKNLESAMNEANTVPGWHVNSNDQTIIPLIWGPKSLPAYNPYIFDKTNNKIGVVLSKYNGNFNQVPGIADPTVGSIYQDVDVTPGSEIQLHYISSSMNNIWGVNGARVYIYDANNPSTLLYKGTPDILQNPIGNFVGVFQVPETVSRLRLRFESALNRSTDSTNGHRLLTGPNNFGGGVLADVTINSGAYLTATVNNTHYFAQSGSINADRVYQEIGFRIENRGHSSSNKTEYTIVLPEDVTYVSTKNATGKFNAATKELTVKIDRLEAGASKNISIGLSLPTDRPIEKEFLGHLTYVTDGINMNRLSDSKDFGRNNGDHYTRYGVHNEFVSVDSAMRQGDIVLDKQTITVKMYKQHLRDKVTEIEDDLANLDQNDNSPEVWEAMQVVLRKAKEVLAETDEMPISELKDQATINSIDLNLDKAHAKLSLDKVARTKRALFMGNDTATIEEKNAVIEQVNQALQSSYTAVDQSMTSNDVATNKDTGINEITMIDLTPTVKQAAIDELTERANAKKVEFDNNPDATVEEKEAAKATIDNLVSEATTNIMNETTNNGVAQQKTSSIDSVNAATITPIVRSNARTAIDNIASARKVEIDKDNNATLEEKNAAKTEIDNLVARAKADINSLNHNNEIEILKENKVNEISQVVAHPVKKNAAAQAIDQAAIAKKQEIDLIEDATIEEKEVAKAKVDKIVTEAKNNINQATTNSSVDDAQNEGITAINAVIPEVVKKSDARDTIDEVARIKKAAIDQTPDATVEEKEAAIAKIDQEVTKAKEQIHQALKNENVDTAKINGTNFINAIQPEITKKIKAREAIDEVARAKKEAIDRIQDATTEEKEAAKAKVDQAVTEAKGHINEAINNSGVDEAKTNGTTTINAIQPEVIKKSEARQAIDDVAKAKKEAIDQTPDATTEEKEAAKAKVDQAVTEAKAHINEAITNSDVDEAKTNGTNTINAIQPDVLKKSEARQAIDNEVINKKTEIDNNVDATIEEKEAAKSKVDEAAVEAKNNINHTEINQAVDQAKEDGVTTVSHIQPNIVKKIAAKTAIDEVARIKKEAIDQTPGATTEEKEAAKSKVDEAATEARNNINRALSNNDVDQVVHNSTASINNIQPDIVKKEQAKRGIDTQAKIKKAIIDQTSDATTEEKEAAKSKVDEEVTKAKHSIDQAVTNSDVDQAKDRGTVAINNIQPEVVKKETAKTSIDQIALTRKNIIDQTPDATTEEKEVAKSKVDEEVTKAKRNINQAVTNNDVNQVEHNSTIAINNIQPNIIKKIAAKTLIDQVARAKKNNIDQTSNATIEEKEAAKQKVDEEVTKAKHSIDQAITNSDVDQAKDRGTVAINNIQPEVVKKETAKNAIDQIALTRKAIIDQTPDATTEEKEAAKSKVDEEVIKAKHGIDQAKTNNDVDQVEQNSTTMINNIQPTVVKKSEARQAIDDLAKLKKATIDLTQEATEEEKEAAKSKVDQALTEAKTHINEAENDDGVDNAKTKGINVINTIQLEIIKKVEAKHEIDQSAIAKKKIIDQTPDATEEEKEVAKQKVDEEATKAKDNIDQATTNDAVDQAKTTGNTEINNIQPEVVKKSLARQAIDEVAKVKKEKINQMLDATEEEKEAAKQKVDEEVIKAKNNINQATTNDGVNNAKTTGKNTIENIQPEVVKKAEARKAIDEAATLRKNLIDQDNSTTKEEKDIAKQKIDDEVNKAKRNVDQSINNSNVDHAQINGISAINNINAVALKKTQAKKSIDDEVTAKKAEIDSNHEATNEEKEMTKRKVDEAATKAKHNVDQSTTNDTVDQSTQIGISIISNIQPETIQKSLARQAIDDEATIKKAEIENNHNATKEEKDVARQKVDEEVIKAKNNIAQSTTNSDVEIAKESGKHAIDEIQPEIVKKSVAKQTIDELAKQKKAEIDQTPNATKEEKDAAKQKVEEAVMRTKKLLEGANTNSDVDQTTEQGKQSINSIQVEVIKKADALSKLEVELQKLKDKVSSDQTFTIDEKLFIKQKLDESYKKAEEKVNQAQTNKQVDNIKIHYLQEFNKIVLIDKVKLKAKAQIFDVANKRKAYIKGLTNISEYNRNKAYKQIDVYVMKALNKLVENVTTNDINELTRVTINEIEHVNVKQFENNFGLVNDNKVTFNNFNNKFNVNNNHSKLNTLPYTGENENSLLSLAEFTLLSGLLLLLKRRKKEDK . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 60795 67895 . + . GCA_005502385.1_00095_mRNA GCA_005502385.1_00095 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNLFKKQKFSIRKFSVGTFSTLIATLVFLSHPGHAATHDAETNTSAPQTNESATINKQNTNIEQPHNETTSANTSNSNENNRNNESNTSSDYSINREREEGTVNNVINSTENNTNHNEKVTTNDVVSNENNHETTNVNQPHRRGKRSVDNTPSTTNTDPMAVNEQNTGQIINGTFTDNSQGATIPTKNLESAMNEANTVPGWHVNSNDQTIIPLIWGPKSLPAYNPYIFDKTNNKIGVVLSKYNGNFNQVPGIADPTVGSIYQDVDVTPGSEIQLHYISSSMNNIWGVNGARVYIYDANNPSTLLYKGTPDILQNPIGNFVGVFQVPETVSRLRLRFESALNRSTDSTNGHRLLTGPNNFGGGVLADVTINSGAYLTATVNNTHYFAQSGSINADRVYQEIGFRIENRGHSSSNKTEYTIVLPEDVTYVSTKNATGKFNAATKELTVKIDRLEAGASKNISIGLSLPTDRPIEKEFLGHLTYVTDGINMNRLSDSKDFGRNNGDHYTRYGVHNEFVSVDSAMRQGDIVLDKQTITVKMYKQHLRDKVTEIEDDLANLDQNDNSPEVWEAMQVVLRKAKEVLAETDEMPISELKDQATINSIDLNLDKAHAKLSLDKVARTKRALFMGNDTATIEEKNAVIEQVNQALQSSYTAVDQSMTSNDVATNKDTGINEITMIDLTPTVKQAAIDELTERANAKKVEFDNNPDATVEEKEAAKATIDNLVSEATTNIMNETTNNGVAQQKTSSIDSVNAATITPIVRSNARTAIDNIASARKVEIDKDNNATLEEKNAAKTEIDNLVARAKADINSLNHNNEIEILKENKVNEISQVVAHPVKKNAAAQAIDQAAIAKKQEIDLIEDATIEEKEVAKAKVDKIVTEAKNNINQATTNSSVDDAQNEGITAINAVIPEVVKKSDARDTIDEVARIKKAAIDQTPDATVEEKEAAIAKIDQEVTKAKEQIHQALKNENVDTAKINGTNFINAIQPEITKKIKAREAIDEVARAKKEAIDRIQDATTEEKEAAKAKVDQAVTEAKGHINEAINNSGVDEAKTNGTTTINAIQPEVIKKSEARQAIDDVAKAKKEAIDQTPDATTEEKEAAKAKVDQAVTEAKAHINEAITNSDVDEAKTNGTNTINAIQPDVLKKSEARQAIDNEVINKKTEIDNNVDATIEEKEAAKSKVDEAAVEAKNNINHTEINQAVDQAKEDGVTTVSHIQPNIVKKIAAKTAIDEVARIKKEAIDQTPGATTEEKEAAKSKVDEAATEARNNINRALSNNDVDQVVHNSTASINNIQPDIVKKEQAKRGIDTQAKIKKAIIDQTSDATTEEKEAAKSKVDEEVTKAKHSIDQAVTNSDVDQAKDRGTVAINNIQPEVVKKETAKTSIDQIALTRKNIIDQTPDATTEEKEVAKSKVDEEVTKAKRNINQAVTNNDVNQVEHNSTIAINNIQPNIIKKIAAKTLIDQVARAKKNNIDQTSNATIEEKEAAKQKVDEEVTKAKHSIDQAITNSDVDQAKDRGTVAINNIQPEVVKKETAKNAIDQIALTRKAIIDQTPDATTEEKEAAKSKVDEEVIKAKHGIDQAKTNNDVDQVEQNSTTMINNIQPTVVKKSEARQAIDDLAKLKKATIDLTQEATEEEKEAAKSKVDQALTEAKTHINEAENDDGVDNAKTKGINVINTIQLEIIKKVEAKHEIDQSAIAKKKIIDQTPDATEEEKEVAKQKVDEEATKAKDNIDQATTNDAVDQAKTTGNTEINNIQPEVVKKSLARQAIDEVAKVKKEKINQMLDATEEEKEAAKQKVDEEVIKAKNNINQATTNDGVNNAKTTGKNTIENIQPEVVKKAEARKAIDEAATLRKNLIDQDNSTTKEEKDIAKQKIDDEVNKAKRNVDQSINNSNVDHAQINGISAINNINAVALKKTQAKKSIDDEVTAKKAEIDSNHEATNEEKEMTKRKVDEAATKAKHNVDQSTTNDTVDQSTQIGISIISNIQPETIQKSLARQAIDDEATIKKAEIENNHNATKEEKDVARQKVDEEVIKAKNNIAQSTTNSDVEIAKESGKHAIDEIQPEIVKKSVAKQTIDELAKQKKAEIDQTPNATKEEKDAAKQKVEEAVMRTKKLLEGANTNSDVDQTTEQGKQSINSIQVEVIKKADALSKLEVELQKLKDKVSSDQTFTIDEKLFIKQKLDESYKKAEEKVNQAQTNKQVDNIKIHYLQEFNKIVLIDKVKLKAKAQIFDVANKRKAYIKGLTNISEYNRNKAYKQIDVYVMKALNKLVENVTTNDINELTRVTINEIEHVNVKQFENNFGLVNDNKVTFNNFNNKFNVNNNHSKLNTLPYTGENENSLLSLAEFTLLSGLLLLLKRRKKEDK . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 60795 67895 . + 0 GCA_005502385.1_00095 GCA_005502385.1_00095_gene,GCA_005502385.1_00095_mRNA GCA_005502385.1_00095 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNLFKKQKFSIRKFSVGTFSTLIATLVFLSHPGHAATHDAETNTSAPQTNESATINKQNTNIEQPHNETTSANTSNSNENNRNNESNTSSDYSINREREEGTVNNVINSTENNTNHNEKVTTNDVVSNENNHETTNVNQPHRRGKRSVDNTPSTTNTDPMAVNEQNTGQIINGTFTDNSQGATIPTKNLESAMNEANTVPGWHVNSNDQTIIPLIWGPKSLPAYNPYIFDKTNNKIGVVLSKYNGNFNQVPGIADPTVGSIYQDVDVTPGSEIQLHYISSSMNNIWGVNGARVYIYDANNPSTLLYKGTPDILQNPIGNFVGVFQVPETVSRLRLRFESALNRSTDSTNGHRLLTGPNNFGGGVLADVTINSGAYLTATVNNTHYFAQSGSINADRVYQEIGFRIENRGHSSSNKTEYTIVLPEDVTYVSTKNATGKFNAATKELTVKIDRLEAGASKNISIGLSLPTDRPIEKEFLGHLTYVTDGINMNRLSDSKDFGRNNGDHYTRYGVHNEFVSVDSAMRQGDIVLDKQTITVKMYKQHLRDKVTEIEDDLANLDQNDNSPEVWEAMQVVLRKAKEVLAETDEMPISELKDQATINSIDLNLDKAHAKLSLDKVARTKRALFMGNDTATIEEKNAVIEQVNQALQSSYTAVDQSMTSNDVATNKDTGINEITMIDLTPTVKQAAIDELTERANAKKVEFDNNPDATVEEKEAAKATIDNLVSEATTNIMNETTNNGVAQQKTSSIDSVNAATITPIVRSNARTAIDNIASARKVEIDKDNNATLEEKNAAKTEIDNLVARAKADINSLNHNNEIEILKENKVNEISQVVAHPVKKNAAAQAIDQAAIAKKQEIDLIEDATIEEKEVAKAKVDKIVTEAKNNINQATTNSSVDDAQNEGITAINAVIPEVVKKSDARDTIDEVARIKKAAIDQTPDATVEEKEAAIAKIDQEVTKAKEQIHQALKNENVDTAKINGTNFINAIQPEITKKIKAREAIDEVARAKKEAIDRIQDATTEEKEAAKAKVDQAVTEAKGHINEAINNSGVDEAKTNGTTTINAIQPEVIKKSEARQAIDDVAKAKKEAIDQTPDATTEEKEAAKAKVDQAVTEAKAHINEAITNSDVDEAKTNGTNTINAIQPDVLKKSEARQAIDNEVINKKTEIDNNVDATIEEKEAAKSKVDEAAVEAKNNINHTEINQAVDQAKEDGVTTVSHIQPNIVKKIAAKTAIDEVARIKKEAIDQTPGATTEEKEAAKSKVDEAATEARNNINRALSNNDVDQVVHNSTASINNIQPDIVKKEQAKRGIDTQAKIKKAIIDQTSDATTEEKEAAKSKVDEEVTKAKHSIDQAVTNSDVDQAKDRGTVAINNIQPEVVKKETAKTSIDQIALTRKNIIDQTPDATTEEKEVAKSKVDEEVTKAKRNINQAVTNNDVNQVEHNSTIAINNIQPNIIKKIAAKTLIDQVARAKKNNIDQTSNATIEEKEAAKQKVDEEVTKAKHSIDQAITNSDVDQAKDRGTVAINNIQPEVVKKETAKNAIDQIALTRKAIIDQTPDATTEEKEAAKSKVDEEVIKAKHGIDQAKTNNDVDQVEQNSTTMINNIQPTVVKKSEARQAIDDLAKLKKATIDLTQEATEEEKEAAKSKVDQALTEAKTHINEAENDDGVDNAKTKGINVINTIQLEIIKKVEAKHEIDQSAIAKKKIIDQTPDATEEEKEVAKQKVDEEATKAKDNIDQATTNDAVDQAKTTGNTEINNIQPEVVKKSLARQAIDEVAKVKKEKINQMLDATEEEKEAAKQKVDEEVIKAKNNINQATTNDGVNNAKTTGKNTIENIQPEVVKKAEARKAIDEAATLRKNLIDQDNSTTKEEKDIAKQKIDDEVNKAKRNVDQSINNSNVDHAQINGISAINNINAVALKKTQAKKSIDDEVTAKKAEIDSNHEATNEEKEMTKRKVDEAATKAKHNVDQSTTNDTVDQSTQIGISIISNIQPETIQKSLARQAIDDEATIKKAEIENNHNATKEEKDVARQKVDEEVIKAKNNIAQSTTNSDVEIAKESGKHAIDEIQPEIVKKSVAKQTIDELAKQKKAEIDQTPNATKEEKDAAKQKVEEAVMRTKKLLEGANTNSDVDQTTEQGKQSINSIQVEVIKKADALSKLEVELQKLKDKVSSDQTFTIDEKLFIKQKLDESYKKAEEKVNQAQTNKQVDNIKIHYLQEFNKIVLIDKVKLKAKAQIFDVANKRKAYIKGLTNISEYNRNKAYKQIDVYVMKALNKLVENVTTNDINELTRVTINEIEHVNVKQFENNFGLVNDNKVTFNNFNNKFNVNNNHSKLNTLPYTGENENSLLSLAEFTLLSGLLLLLKRRKKEDK persistent 2366 Gram-positive cocci surface proteins LPxTG domain-containing protein UniRef50_A0A3S7GXP8 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 67992 69248 . - . GCA_005502385.1_00096_gene GCA_005502385.1_00096 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MYQTIIIGGGPSGLMAAVAASENSSKVLLIEKKKGLGRKLKISGGGRCNVTNRLPYEEIIKNIPGNGKFLYSPFSKFDNESIIEFFESRGIKLKEEDHGRMFPVSNKSQDIVDTLVNTIKNNNVEIKEETVVNDISKNDQSFIVKTQDGEFESKTVIIATGGTSVPQTGSTGDGYRFAKNLGHTITELFPTEVPITSSESFIKNKTLKGLSLKDVELSVLKKNGKKRISHQMDMIFTHFGVSGPAALRCSQFVYKEQKNQKKQDIQLQLDVFPEISLQDLENKIKKILSEEPDKYIKNALRGLIEERYLLFMLEQANINENTTFHHLSNQQLTHLAEHFKQFIFTVNGTLSIERAFVTGGGVSLKEIWPKTMMSKIQPGLFLCGEVLDIHGYTGGYNITSALVTGHVAGNEARQFIYT . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 67992 69248 . - . GCA_005502385.1_00096_mRNA GCA_005502385.1_00096 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MYQTIIIGGGPSGLMAAVAASENSSKVLLIEKKKGLGRKLKISGGGRCNVTNRLPYEEIIKNIPGNGKFLYSPFSKFDNESIIEFFESRGIKLKEEDHGRMFPVSNKSQDIVDTLVNTIKNNNVEIKEETVVNDISKNDQSFIVKTQDGEFESKTVIIATGGTSVPQTGSTGDGYRFAKNLGHTITELFPTEVPITSSESFIKNKTLKGLSLKDVELSVLKKNGKKRISHQMDMIFTHFGVSGPAALRCSQFVYKEQKNQKKQDIQLQLDVFPEISLQDLENKIKKILSEEPDKYIKNALRGLIEERYLLFMLEQANINENTTFHHLSNQQLTHLAEHFKQFIFTVNGTLSIERAFVTGGGVSLKEIWPKTMMSKIQPGLFLCGEVLDIHGYTGGYNITSALVTGHVAGNEARQFIYT . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 67992 69248 . - 0 GCA_005502385.1_00096 GCA_005502385.1_00096_gene,GCA_005502385.1_00096_mRNA GCA_005502385.1_00096 3-dehydro-bile acid delta(4%2C6)-reductase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MYQTIIIGGGPSGLMAAVAASENSSKVLLIEKKKGLGRKLKISGGGRCNVTNRLPYEEIIKNIPGNGKFLYSPFSKFDNESIIEFFESRGIKLKEEDHGRMFPVSNKSQDIVDTLVNTIKNNNVEIKEETVVNDISKNDQSFIVKTQDGEFESKTVIIATGGTSVPQTGSTGDGYRFAKNLGHTITELFPTEVPITSSESFIKNKTLKGLSLKDVELSVLKKNGKKRISHQMDMIFTHFGVSGPAALRCSQFVYKEQKNQKKQDIQLQLDVFPEISLQDLENKIKKILSEEPDKYIKNALRGLIEERYLLFMLEQANINENTTFHHLSNQQLTHLAEHFKQFIFTVNGTLSIERAFVTGGGVSLKEIWPKTMMSKIQPGLFLCGEVLDIHGYTGGYNITSALVTGHVAGNEARQFIYT persistent 418 BaiN-like insert domain-containing protein WP_017176349.1 UPI0002FE640E UniRef100_A0A3S7GZW0,UniRef50_Q795R8,UniRef90_A0AAE5MYT8 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 69525 71162 . + . GCA_005502385.1_00097_gene GCA_005502385.1_00097 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSENKEMVRGTFLITFSILITKILGVLFVIPFYAIMGANAEEKLAPFNYAYVPYNIAIAVATAGVPLAASKFVAKYNAIGAYRVGQKLYKSSFIVMSISGIIGFLILFYLAPDIAVITLGQKEGKGGWTVPEITWIIRIISIVVVFIPLLATWRGVFQGYQSMGPTAVSEVTEQLARIIFILIGSYLVLNVFHGTYLQANGVATFAAAVGAIAGLFTLWYYWKKRKPHIQKMVESDRTGLDISYGRMYKEIIAYSIPFVIVSLNFPLFNLVDQFTHNNALDAAGFHANKDYFFTILNFTTNKIVMIPTSLAAGFAVSLIPYITKTYAEGRLTEMHRQIKTSIGVLMYITVPASLGIMALAAPLYTVFYQYNPDGNKMLFIYAPVAILISLLSVTASMLQGIDKQKLTVFVILGAVVLKLALNIPLIMTFHTAGAILSTAIALSFAITANFFILKIYAKYEFTETFVQVAKIFIYSLIMMISVEIVYLILGHFVPVERKFGAMIILFVGVIIGALVYGGITIKNRLADQFLGELPAKIRRKVGFLR . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 69525 71162 . + . GCA_005502385.1_00097_mRNA GCA_005502385.1_00097 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSENKEMVRGTFLITFSILITKILGVLFVIPFYAIMGANAEEKLAPFNYAYVPYNIAIAVATAGVPLAASKFVAKYNAIGAYRVGQKLYKSSFIVMSISGIIGFLILFYLAPDIAVITLGQKEGKGGWTVPEITWIIRIISIVVVFIPLLATWRGVFQGYQSMGPTAVSEVTEQLARIIFILIGSYLVLNVFHGTYLQANGVATFAAAVGAIAGLFTLWYYWKKRKPHIQKMVESDRTGLDISYGRMYKEIIAYSIPFVIVSLNFPLFNLVDQFTHNNALDAAGFHANKDYFFTILNFTTNKIVMIPTSLAAGFAVSLIPYITKTYAEGRLTEMHRQIKTSIGVLMYITVPASLGIMALAAPLYTVFYQYNPDGNKMLFIYAPVAILISLLSVTASMLQGIDKQKLTVFVILGAVVLKLALNIPLIMTFHTAGAILSTAIALSFAITANFFILKIYAKYEFTETFVQVAKIFIYSLIMMISVEIVYLILGHFVPVERKFGAMIILFVGVIIGALVYGGITIKNRLADQFLGELPAKIRRKVGFLR . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 69525 71162 . + 0 GCA_005502385.1_00097 GCA_005502385.1_00097_gene,GCA_005502385.1_00097_mRNA GCA_005502385.1_00097 Lipid II flippase MurJ GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSENKEMVRGTFLITFSILITKILGVLFVIPFYAIMGANAEEKLAPFNYAYVPYNIAIAVATAGVPLAASKFVAKYNAIGAYRVGQKLYKSSFIVMSISGIIGFLILFYLAPDIAVITLGQKEGKGGWTVPEITWIIRIISIVVVFIPLLATWRGVFQGYQSMGPTAVSEVTEQLARIIFILIGSYLVLNVFHGTYLQANGVATFAAAVGAIAGLFTLWYYWKKRKPHIQKMVESDRTGLDISYGRMYKEIIAYSIPFVIVSLNFPLFNLVDQFTHNNALDAAGFHANKDYFFTILNFTTNKIVMIPTSLAAGFAVSLIPYITKTYAEGRLTEMHRQIKTSIGVLMYITVPASLGIMALAAPLYTVFYQYNPDGNKMLFIYAPVAILISLLSVTASMLQGIDKQKLTVFVILGAVVLKLALNIPLIMTFHTAGAILSTAIALSFAITANFFILKIYAKYEFTETFVQVAKIFIYSLIMMISVEIVYLILGHFVPVERKFGAMIILFVGVIIGALVYGGITIKNRLADQFLGELPAKIRRKVGFLR persistent 545 Polysaccharide biosynthesis protein WP_017176348.1 UPI000318901A UniRef100_A0A4Q9WN31,UniRef50_B9E7H2,UniRef90_A0A974KYD9 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 71159 71845 . + . GCA_005502385.1_00098_gene GCA_005502385.1_00098 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MRLDKFLSNMGVGTRTEVKQLLKKNSVKVNDKVEKSPKSQVNPEQDEITVDGKIIEYINHVYIMLNKPKGYVSATYDDINQTVIDLIDDYRHLDIFPVGRLDKDTEGLLLITNDGQFNHNLMSPSKHVSKTYKVTSKYPIKNEDIIAFKNGIELSDGKVKPAQLEKLDHKLSLVTIYEGKYHQVKRMFHSIDNEVLELKRLKISNLTLDENLKSGEYRLLTSEELKLL . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 71159 71845 . + . GCA_005502385.1_00098_mRNA GCA_005502385.1_00098 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MRLDKFLSNMGVGTRTEVKQLLKKNSVKVNDKVEKSPKSQVNPEQDEITVDGKIIEYINHVYIMLNKPKGYVSATYDDINQTVIDLIDDYRHLDIFPVGRLDKDTEGLLLITNDGQFNHNLMSPSKHVSKTYKVTSKYPIKNEDIIAFKNGIELSDGKVKPAQLEKLDHKLSLVTIYEGKYHQVKRMFHSIDNEVLELKRLKISNLTLDENLKSGEYRLLTSEELKLL . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 71159 71845 . + 0 GCA_005502385.1_00098 GCA_005502385.1_00098_gene,GCA_005502385.1_00098_mRNA GCA_005502385.1_00098 Ribosomal small subunit pseudouridine synthase A GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MRLDKFLSNMGVGTRTEVKQLLKKNSVKVNDKVEKSPKSQVNPEQDEITVDGKIIEYINHVYIMLNKPKGYVSATYDDINQTVIDLIDDYRHLDIFPVGRLDKDTEGLLLITNDGQFNHNLMSPSKHVSKTYKVTSKYPIKNEDIIAFKNGIELSDGKVKPAQLEKLDHKLSLVTIYEGKYHQVKRMFHSIDNEVLELKRLKISNLTLDENLKSGEYRLLTSEELKLL persistent 228 Pseudouridine synthase WP_017176347.1 UPI0002F432B6 UniRef100_A0A4Q9WRL1,UniRef50_A0A2S6D0E1,UniRef90_A0A4Q9WRL1 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 71869 72303 . + . GCA_005502385.1_00099_gene GCA_005502385.1_00099 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MMAKSAGLLRIVAGIGAAAAAVALSRESSRNKLKAEYNKYKENPEGYKQNAKGLVNDISSKANETIQNVKNDPQGYANRLKNDPKSLLQDEKSKFTNVNTKKNDTHELAEGKFDDEGGATVNNNLRVVTEEDLKNNHNALDDRH . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 71869 72303 . + . GCA_005502385.1_00099_mRNA GCA_005502385.1_00099 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MMAKSAGLLRIVAGIGAAAAAVALSRESSRNKLKAEYNKYKENPEGYKQNAKGLVNDISSKANETIQNVKNDPQGYANRLKNDPKSLLQDEKSKFTNVNTKKNDTHELAEGKFDDEGGATVNNNLRVVTEEDLKNNHNALDDRH . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 71869 72303 . + 0 GCA_005502385.1_00099 GCA_005502385.1_00099_gene,GCA_005502385.1_00099_mRNA GCA_005502385.1_00099 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MMAKSAGLLRIVAGIGAAAAAVALSRESSRNKLKAEYNKYKENPEGYKQNAKGLVNDISSKANETIQNVKNDPQGYANRLKNDPKSLLQDEKSKFTNVNTKKNDTHELAEGKFDDEGGATVNNNLRVVTEEDLKNNHNALDDRH persistent 144 ytxH YtxH domain-containing protein UniRef50_A0A1J3ZYN5,UniRef90_A0AAE5JL49 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 72447 73856 . + . GCA_005502385.1_00100_gene GCA_005502385.1_00100 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MWKEKVQEYESQIIEDLNGLLSIKSVRDDSQASEEAPVGPGPREALDYMYKIAQRDGFSTHDVDHIAGRIEAGQGEDVLGILCHVDVVPAGDGWDSDPFKPVVTDDAIVARGTLDDKGPTIAAYYAVKILNEMNVDWKKRIHIIIGTDEESDWKCTERYFKTEEMPALGFAPDAEFPAIHGEKGITTFDLVQNVSSHHTDHSEAKLLSFKSGQRYNMVPDHAKAHILVEKNMTDVVQHFEHYLDQRQLEGEAVVDNGELILTVEGKAVHGMDPSLGVNAGLYLIDFLSTLNLNQAAKEFAEFSNRYLHESHFGEKMGMKFHTDVMGDVTANVGIITYDKEKGGKFGINLRYPKGFEFETALERFKNEIKSQGFEIELGKVQQPHFVDKNDPFVQKLVTAYRNQTGDMTEPYTIGGGTYARNLDKGVAFGAMFEDSEDLMHQKNEYITKKQLFNATSIYLEAIYSLCVEG . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 72447 73856 . + . GCA_005502385.1_00100_mRNA GCA_005502385.1_00100 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MWKEKVQEYESQIIEDLNGLLSIKSVRDDSQASEEAPVGPGPREALDYMYKIAQRDGFSTHDVDHIAGRIEAGQGEDVLGILCHVDVVPAGDGWDSDPFKPVVTDDAIVARGTLDDKGPTIAAYYAVKILNEMNVDWKKRIHIIIGTDEESDWKCTERYFKTEEMPALGFAPDAEFPAIHGEKGITTFDLVQNVSSHHTDHSEAKLLSFKSGQRYNMVPDHAKAHILVEKNMTDVVQHFEHYLDQRQLEGEAVVDNGELILTVEGKAVHGMDPSLGVNAGLYLIDFLSTLNLNQAAKEFAEFSNRYLHESHFGEKMGMKFHTDVMGDVTANVGIITYDKEKGGKFGINLRYPKGFEFETALERFKNEIKSQGFEIELGKVQQPHFVDKNDPFVQKLVTAYRNQTGDMTEPYTIGGGTYARNLDKGVAFGAMFEDSEDLMHQKNEYITKKQLFNATSIYLEAIYSLCVEG . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 72447 73856 . + 0 GCA_005502385.1_00100 GCA_005502385.1_00100_gene,GCA_005502385.1_00100_mRNA GCA_005502385.1_00100 Putative dipeptidase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MWKEKVQEYESQIIEDLNGLLSIKSVRDDSQASEEAPVGPGPREALDYMYKIAQRDGFSTHDVDHIAGRIEAGQGEDVLGILCHVDVVPAGDGWDSDPFKPVVTDDAIVARGTLDDKGPTIAAYYAVKILNEMNVDWKKRIHIIIGTDEESDWKCTERYFKTEEMPALGFAPDAEFPAIHGEKGITTFDLVQNVSSHHTDHSEAKLLSFKSGQRYNMVPDHAKAHILVEKNMTDVVQHFEHYLDQRQLEGEAVVDNGELILTVEGKAVHGMDPSLGVNAGLYLIDFLSTLNLNQAAKEFAEFSNRYLHESHFGEKMGMKFHTDVMGDVTANVGIITYDKEKGGKFGINLRYPKGFEFETALERFKNEIKSQGFEIELGKVQQPHFVDKNDPFVQKLVTAYRNQTGDMTEPYTIGGGTYARNLDKGVAFGAMFEDSEDLMHQKNEYITKKQLFNATSIYLEAIYSLCVEG persistent 469 pepV dipeptidase PepV 3.4.13.- GO:0008270,GO:0016805 WP_002488011.1 UPI00024E190F UniRef100_A0A3S7H0C5,UniRef50_Q2FXH9,UniRef90_A0A3S7H0C5 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 73860 74711 . + . GCA_005502385.1_00101_gene GCA_005502385.1_00101 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTKVFINGEFLNQEDAKVSYEDRGYVFGDGIYEYIRAYNGKLFTVTEHFERFLRSASEIQIDLGYTVEELTDIVRQLLKINDIQNGGIYIQATRGVAPRNHSFPTPEVKPAIMAFAKSYDRPYDDFENGINAVTVEDIRWLRCDIKSLNLLGNVLAKEYAVKYNATEAIQHRDETVTEGASSNVYAIKDGEIYTHPVNNYILNGITRKVIKWVAEDDNIPFNEETFTVDFLKNADEVIVSSTSAEVTPVVKIDGEIVNDGKVGPITKKLQEGFEKYIESKSIN . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 73860 74711 . + . GCA_005502385.1_00101_mRNA GCA_005502385.1_00101 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTKVFINGEFLNQEDAKVSYEDRGYVFGDGIYEYIRAYNGKLFTVTEHFERFLRSASEIQIDLGYTVEELTDIVRQLLKINDIQNGGIYIQATRGVAPRNHSFPTPEVKPAIMAFAKSYDRPYDDFENGINAVTVEDIRWLRCDIKSLNLLGNVLAKEYAVKYNATEAIQHRDETVTEGASSNVYAIKDGEIYTHPVNNYILNGITRKVIKWVAEDDNIPFNEETFTVDFLKNADEVIVSSTSAEVTPVVKIDGEIVNDGKVGPITKKLQEGFEKYIESKSIN . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 73860 74711 . + 0 GCA_005502385.1_00101 GCA_005502385.1_00101_gene,GCA_005502385.1_00101_mRNA GCA_005502385.1_00101 D-alanine aminotransferase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTKVFINGEFLNQEDAKVSYEDRGYVFGDGIYEYIRAYNGKLFTVTEHFERFLRSASEIQIDLGYTVEELTDIVRQLLKINDIQNGGIYIQATRGVAPRNHSFPTPEVKPAIMAFAKSYDRPYDDFENGINAVTVEDIRWLRCDIKSLNLLGNVLAKEYAVKYNATEAIQHRDETVTEGASSNVYAIKDGEIYTHPVNNYILNGITRKVIKWVAEDDNIPFNEETFTVDFLKNADEVIVSSTSAEVTPVVKIDGEIVNDGKVGPITKKLQEGFEKYIESKSIN persistent 283 dat D-amino-acid transaminase 2.6.1.21 GO:0019480,GO:0030170,GO:0046416,GO:0047810 WP_002488018.1 UPI00024E1910 UniRef100_A0A4Q9WN29,UniRef50_Q5HNG0,UniRef90_A0A4Q9WN29 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 75049 75840 . + . GCA_005502385.1_00102_gene GCA_005502385.1_00102 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MEQFYQLGWTLDSAGGASGEAYMAEQDGQKLFLKRNSNPFIAALSAEGIVPKLVWTKRIETGEVVTAQHWKNGRELTPSEMSQRRVAELLKKIHGSKPLLNMLKRMEMEPITPNIMLKKINASLSRDVLTHHIIRKALTYLEDHIPNLDSRFFTVVHGDVNHNNWLLSDRDELFLVDWEGAMIADPAIDIGMLLYNYVPKQQWSNWFNTYGVKESMDLNKRMKWYTVIQSIGMIQWYEEQKRFKDMNTWLKFLNEVMNSNLFI . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 75049 75840 . + . GCA_005502385.1_00102_mRNA GCA_005502385.1_00102 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MEQFYQLGWTLDSAGGASGEAYMAEQDGQKLFLKRNSNPFIAALSAEGIVPKLVWTKRIETGEVVTAQHWKNGRELTPSEMSQRRVAELLKKIHGSKPLLNMLKRMEMEPITPNIMLKKINASLSRDVLTHHIIRKALTYLEDHIPNLDSRFFTVVHGDVNHNNWLLSDRDELFLVDWEGAMIADPAIDIGMLLYNYVPKQQWSNWFNTYGVKESMDLNKRMKWYTVIQSIGMIQWYEEQKRFKDMNTWLKFLNEVMNSNLFI . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 75049 75840 . + 0 GCA_005502385.1_00102 GCA_005502385.1_00102_gene,GCA_005502385.1_00102_mRNA GCA_005502385.1_00102 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MEQFYQLGWTLDSAGGASGEAYMAEQDGQKLFLKRNSNPFIAALSAEGIVPKLVWTKRIETGEVVTAQHWKNGRELTPSEMSQRRVAELLKKIHGSKPLLNMLKRMEMEPITPNIMLKKINASLSRDVLTHHIIRKALTYLEDHIPNLDSRFFTVVHGDVNHNNWLLSDRDELFLVDWEGAMIADPAIDIGMLLYNYVPKQQWSNWFNTYGVKESMDLNKRMKWYTVIQSIGMIQWYEEQKRFKDMNTWLKFLNEVMNSNLFI persistent 263 cotS Aminoglycoside phosphotransferase domain-containing protein COG0510,H WP_002488010.1 UPI00024E1911 UniRef100_A0A4Q9WN28,UniRef50_I3ECD2,UniRef90_Q4L793 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 75854 76495 . + . GCA_005502385.1_00103_gene GCA_005502385.1_00103 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MRVRYKPWAEDYLKEHPDLVDMDGSHAGKMSDWFDKKQPIYIEIGSGMGQFITTLAEQHPEINFVSLEREKSVMYKVLDKVKDKGLTNLKMICNDAIELNEYFKENEVSRIYLNFSDPWPKKRHAKRRLTYRTFLALYEQILKEDGEIHFKTDNRGLFAYSLESMSQYGMYFTKLNLNLHDEDDEDNILTEYEKKFSDKGSRIYRMEAKFHKN . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 75854 76495 . + . GCA_005502385.1_00103_mRNA GCA_005502385.1_00103 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MRVRYKPWAEDYLKEHPDLVDMDGSHAGKMSDWFDKKQPIYIEIGSGMGQFITTLAEQHPEINFVSLEREKSVMYKVLDKVKDKGLTNLKMICNDAIELNEYFKENEVSRIYLNFSDPWPKKRHAKRRLTYRTFLALYEQILKEDGEIHFKTDNRGLFAYSLESMSQYGMYFTKLNLNLHDEDDEDNILTEYEKKFSDKGSRIYRMEAKFHKN . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 75854 76495 . + 0 GCA_005502385.1_00103 GCA_005502385.1_00103_gene,GCA_005502385.1_00103_mRNA GCA_005502385.1_00103 tRNA (guanine-N(7)-)-methyltransferase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MRVRYKPWAEDYLKEHPDLVDMDGSHAGKMSDWFDKKQPIYIEIGSGMGQFITTLAEQHPEINFVSLEREKSVMYKVLDKVKDKGLTNLKMICNDAIELNEYFKENEVSRIYLNFSDPWPKKRHAKRRLTYRTFLALYEQILKEDGEIHFKTDNRGLFAYSLESMSQYGMYFTKLNLNLHDEDDEDNILTEYEKKFSDKGSRIYRMEAKFHKN persistent 213 trmB tRNA (guanosine(46)-N7)-methyltransferase TrmB 2.1.1.33 GO:0006400,GO:0008176,GO:0043527 COG0220,J WP_002449690.1 UPI00019FCE9F UniRef100_A0A1L8Y6K2,UniRef50_Q2FXI2,UniRef90_Q4L792 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 76821 77138 . - . GCA_005502385.1_00104_gene GCA_005502385.1_00104 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTRQTIKYISIPIVITIGASTAFILYHTLKNKKVKNPDRILEEVKSYFMDIKGSYILHEPLQNKEQYLNRFVYQGGITQNKNNRDIEYTFYADAHTGEILTIEEN . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 76821 77138 . - . GCA_005502385.1_00104_mRNA GCA_005502385.1_00104 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTRQTIKYISIPIVITIGASTAFILYHTLKNKKVKNPDRILEEVKSYFMDIKGSYILHEPLQNKEQYLNRFVYQGGITQNKNNRDIEYTFYADAHTGEILTIEEN . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 76821 77138 . - 0 GCA_005502385.1_00104 GCA_005502385.1_00104_gene,GCA_005502385.1_00104_mRNA GCA_005502385.1_00104 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTRQTIKYISIPIVITIGASTAFILYHTLKNKKVKNPDRILEEVKSYFMDIKGSYILHEPLQNKEQYLNRFVYQGGITQNKNNRDIEYTFYADAHTGEILTIEEN persistent 105 PepSY domain-containing protein WP_039984215.1 UPI0005875414 UniRef100_A0AAE5JJX9,UniRef50_A0A2A1K7P9,UniRef90_A0AAE5JJX9 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 77231 78313 . + . GCA_005502385.1_00105_gene GCA_005502385.1_00105 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MENDKTLLRIKTLTELHGAPGFEEEVRDYMKKEMTPFVDEVITTHLGSVFGIKKSKKQNAKRVMVAAHMDEIGFMITNITQNGMLQFTNLGGVSNDIWQGQRLQVKNRNGEKIVGVVSNIPKHFRTGNEAVPEIKDLMLDIGAESDKEVRSRGIEIGDTIVPFTPFTQLSEHRYSAKAWDNRYGCVLAIEILELLKDVELDVDLYVGANVQEEVGLRGAKASTELIQPDIAFVVDCSPANDIKGKQQLSGQLGEGTLIRIKDGTMILSPRFRDYLLELVDTFDIRSQYYISPGGTDGGEIHKANKGVPTAVIGVCARYIHSTDAVFDIRDYYAARELLKQAVSHLTNENILTLQFQSEEK . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 77231 78313 . + . GCA_005502385.1_00105_mRNA GCA_005502385.1_00105 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MENDKTLLRIKTLTELHGAPGFEEEVRDYMKKEMTPFVDEVITTHLGSVFGIKKSKKQNAKRVMVAAHMDEIGFMITNITQNGMLQFTNLGGVSNDIWQGQRLQVKNRNGEKIVGVVSNIPKHFRTGNEAVPEIKDLMLDIGAESDKEVRSRGIEIGDTIVPFTPFTQLSEHRYSAKAWDNRYGCVLAIEILELLKDVELDVDLYVGANVQEEVGLRGAKASTELIQPDIAFVVDCSPANDIKGKQQLSGQLGEGTLIRIKDGTMILSPRFRDYLLELVDTFDIRSQYYISPGGTDGGEIHKANKGVPTAVIGVCARYIHSTDAVFDIRDYYAARELLKQAVSHLTNENILTLQFQSEEK . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 77231 78313 . + 0 GCA_005502385.1_00105 GCA_005502385.1_00105_gene,GCA_005502385.1_00105_mRNA GCA_005502385.1_00105 Glutamyl aminopeptidase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MENDKTLLRIKTLTELHGAPGFEEEVRDYMKKEMTPFVDEVITTHLGSVFGIKKSKKQNAKRVMVAAHMDEIGFMITNITQNGMLQFTNLGGVSNDIWQGQRLQVKNRNGEKIVGVVSNIPKHFRTGNEAVPEIKDLMLDIGAESDKEVRSRGIEIGDTIVPFTPFTQLSEHRYSAKAWDNRYGCVLAIEILELLKDVELDVDLYVGANVQEEVGLRGAKASTELIQPDIAFVVDCSPANDIKGKQQLSGQLGEGTLIRIKDGTMILSPRFRDYLLELVDTFDIRSQYYISPGGTDGGEIHKANKGVPTAVIGVCARYIHSTDAVFDIRDYYAARELLKQAVSHLTNENILTLQFQSEEK persistent 360 M42 family metallopeptidase WP_002449682.1 UPI00019FCE9C UniRef100_UPI00019FCE9C,UniRef50_A0A0D1GA35,UniRef90_A0A4Q9WP21 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 78315 78626 . + . GCA_005502385.1_00106_gene GCA_005502385.1_00106 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MITLETEKQFEELKNEQTVFEFTAGWCPDCKVIEPDLPKLEKKYSNFKFVSVDRDKFIDLAIENDIMGIPSFLVYKNGELMGSYIGKERKSIEQIDSFLSQYV . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 78315 78626 . + . GCA_005502385.1_00106_mRNA GCA_005502385.1_00106 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MITLETEKQFEELKNEQTVFEFTAGWCPDCKVIEPDLPKLEKKYSNFKFVSVDRDKFIDLAIENDIMGIPSFLVYKNGELMGSYIGKERKSIEQIDSFLSQYV . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 78315 78626 . + 0 GCA_005502385.1_00106 GCA_005502385.1_00106_gene,GCA_005502385.1_00106_mRNA GCA_005502385.1_00106 Thioredoxin-like protein YtpP GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MITLETEKQFEELKNEQTVFEFTAGWCPDCKVIEPDLPKLEKKYSNFKFVSVDRDKFIDLAIENDIMGIPSFLVYKNGELMGSYIGKERKSIEQIDSFLSQYV persistent 103 Thioredoxin WP_002449688.1 UPI00019FCE9B UniRef100_A0A2A1MFP7,UniRef50_A0A380G846,UniRef90_A0A2A1MFP7 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 78744 79598 . + . GCA_005502385.1_00107_gene GCA_005502385.1_00107 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNVFQMRDTLKQRLKHLDVDFKFDREEETLRIYRRDNFKGVTIKLNAIVAKYEEQKEKIIDEIIYYVEEAIAQMDDNGLSKMKDIQVMPVIRSTSFDKKTKEGHQFVIEEHTAETNIYYALDLGKSYRLIDESMLKTLGLTSQQIKEMSLFNIRKLENKYKTDEVKGNIFYFINSNDGYDASRILNTKFLNEIEAQCEGEMLVAVPHQDVLIIADIRNKTGYDVMAHLTMEFFTKGLVPITSLSFGYKKEHLEPIFILGKNNKQKRDPNVIQRLEANRKKFNKK . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 78744 79598 . + . GCA_005502385.1_00107_mRNA GCA_005502385.1_00107 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNVFQMRDTLKQRLKHLDVDFKFDREEETLRIYRRDNFKGVTIKLNAIVAKYEEQKEKIIDEIIYYVEEAIAQMDDNGLSKMKDIQVMPVIRSTSFDKKTKEGHQFVIEEHTAETNIYYALDLGKSYRLIDESMLKTLGLTSQQIKEMSLFNIRKLENKYKTDEVKGNIFYFINSNDGYDASRILNTKFLNEIEAQCEGEMLVAVPHQDVLIIADIRNKTGYDVMAHLTMEFFTKGLVPITSLSFGYKKEHLEPIFILGKNNKQKRDPNVIQRLEANRKKFNKK . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 78744 79598 . + 0 GCA_005502385.1_00107 GCA_005502385.1_00107_gene,GCA_005502385.1_00107_mRNA GCA_005502385.1_00107 hypothetical protein UPF0354 protein SA1564 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNVFQMRDTLKQRLKHLDVDFKFDREEETLRIYRRDNFKGVTIKLNAIVAKYEEQKEKIIDEIIYYVEEAIAQMDDNGLSKMKDIQVMPVIRSTSFDKKTKEGHQFVIEEHTAETNIYYALDLGKSYRLIDESMLKTLGLTSQQIKEMSLFNIRKLENKYKTDEVKGNIFYFINSNDGYDASRILNTKFLNEIEAQCEGEMLVAVPHQDVLIIADIRNKTGYDVMAHLTMEFFTKGLVPITSLSFGYKKEHLEPIFILGKNNKQKRDPNVIQRLEANRKKFNKK persistent 284 UPF0354 protein J7T32_000065 WP_002449685.1 UPI00019FCE9A UniRef100_UPI00019FCE9A,UniRef50_Q2FXI7,UniRef90_A0A8X8GNN7 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 79627 80223 . + . GCA_005502385.1_00108_gene GCA_005502385.1_00108 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNLFYNKEGVGDVAFLQIEPTDGPFEYEIKNNVVAIKHENQIVGFNIFDFSKVYSVNSNGHIKLNETLVEAIQQSITNAGFDYQLEADLSPKFVVGYVETKEKHPNADKLSILKVDVSSEKLQIVCGAPNVEAGQKVVVAKVGAVMPSGMVIKDAELRGVASSGMICSMRELNLPNAPQEKGIMVLSDDYKVGNAFFD . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 79627 80223 . + . GCA_005502385.1_00108_mRNA GCA_005502385.1_00108 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNLFYNKEGVGDVAFLQIEPTDGPFEYEIKNNVVAIKHENQIVGFNIFDFSKVYSVNSNGHIKLNETLVEAIQQSITNAGFDYQLEADLSPKFVVGYVETKEKHPNADKLSILKVDVSSEKLQIVCGAPNVEAGQKVVVAKVGAVMPSGMVIKDAELRGVASSGMICSMRELNLPNAPQEKGIMVLSDDYKVGNAFFD . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 79627 80223 . + 0 GCA_005502385.1_00108 GCA_005502385.1_00108_gene,GCA_005502385.1_00108_mRNA GCA_005502385.1_00108 hypothetical protein GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MNLFYNKEGVGDVAFLQIEPTDGPFEYEIKNNVVAIKHENQIVGFNIFDFSKVYSVNSNGHIKLNETLVEAIQQSITNAGFDYQLEADLSPKFVVGYVETKEKHPNADKLSILKVDVSSEKLQIVCGAPNVEAGQKVVVAKVGAVMPSGMVIKDAELRGVASSGMICSMRELNLPNAPQEKGIMVLSDDYKVGNAFFD persistent 198 ytpR YtpR family tRNA-binding protein WP_002449679.1 UPI00019FCE99 UniRef100_UPI00019FCE99,UniRef50_O34943,UniRef90_A0A4Q9WRL8 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 80247 83804 . + . GCA_005502385.1_00109_gene GCA_005502385.1_00109 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSWFDELFGNDKHSDEELLRRKNKRRHNSETQKNGEHTLLPENDDIYDRPRGKFRFPIDLGQDAETYDEAVYREVDEDEYMSQKSSKSDKEFGYGAYSYDEIDNNDYPQTYDSATDTRRRRRRQYTNHDDTGVPSIKERPSNKRNKSLNSAQLNENNNRKTTSQYHKYTNNHSHVKLQSERFKSNYKTTSNSTYHHSSFRTSEVPSAVFGTKKRRPIENGVIPPLKENENDDNHNDDKNNLTQDQTAQRVSDNDVKTNISKSKNEPLNQTKYEDTEISIINDQNSNIYETTSSKSKVPNFSQKDNTVNIENIYASQIVEEIRREREKKAQQKRKFKEALQNKRQQSSDSDNEIQKVIDEMYANQAKQYTGESSLDHEENNDEERTTHTEDSTDKMEDTNENTTDNHVIDEGTQTDSNTSNYDDDDEQYQYEEIDLKSVPNIQTVNDKDVEIREVNDTTSTDEHNDDQLSEDNLNVAPIHSTKDKHHHLNKNEDAHLSKANKLQEDNYTSKEEVEEAKYHEMNVSSNEEVTKQSNHNDDDIDHSIDNAIETDTEYASEQVEHNNDSVHDSSSNTEGEKLEDDDKQIVENEDVSSSIKSSIIPGSKPFNVVMTPSDKKRLMDAKKFKKTNKVTVPELKPETKLERKSVSIPSSSPSVKATNNHEEHIKKNINEQSLQDNQEDETSELSNVQNENTQAISMTLNTQNEDQDENEQHESKAAIRKGPNIKLPSLELLEDPEIHQIDNSWIEEKKQELNDAFYYFNVPAEVQNVTVGPSVTRFELAVEKGVKVSRITALQDDLKMALAAKDIRIEAPIPGTSLVGIEVPNQNSSKVSLKSILESPKFKDTESKLTVAMGNRINNEPLLMDIAKTPHALIAGATGSGKSVCINSILMSLLYKNHPEELRLLLIDPKMVELAPYNDLPHLVSPVITDVKAATQSLKWAVEEMERRYKLFAKYHVRNITAFNKKASYEQRMPKIVIVIDELADLMMMAPQEVEQSIARIAQKARACGIHMLVATQRPSVNVITGLIKANIPTRIAFMVSSSVDSRTIIDSGGAERLLGYGDMLYLGSGMNKPIRVQGTFVSDEEIDDVVDFIKAQREPEYLFEEKELLKKTQTQARDELFDDVCSFMVKEGHISTSLIQRHFQIGYNRAARIVDQLEQLDYISGANGSKPRDVFITEADLKKD . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 80247 83804 . + . GCA_005502385.1_00109_mRNA GCA_005502385.1_00109 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSWFDELFGNDKHSDEELLRRKNKRRHNSETQKNGEHTLLPENDDIYDRPRGKFRFPIDLGQDAETYDEAVYREVDEDEYMSQKSSKSDKEFGYGAYSYDEIDNNDYPQTYDSATDTRRRRRRQYTNHDDTGVPSIKERPSNKRNKSLNSAQLNENNNRKTTSQYHKYTNNHSHVKLQSERFKSNYKTTSNSTYHHSSFRTSEVPSAVFGTKKRRPIENGVIPPLKENENDDNHNDDKNNLTQDQTAQRVSDNDVKTNISKSKNEPLNQTKYEDTEISIINDQNSNIYETTSSKSKVPNFSQKDNTVNIENIYASQIVEEIRREREKKAQQKRKFKEALQNKRQQSSDSDNEIQKVIDEMYANQAKQYTGESSLDHEENNDEERTTHTEDSTDKMEDTNENTTDNHVIDEGTQTDSNTSNYDDDDEQYQYEEIDLKSVPNIQTVNDKDVEIREVNDTTSTDEHNDDQLSEDNLNVAPIHSTKDKHHHLNKNEDAHLSKANKLQEDNYTSKEEVEEAKYHEMNVSSNEEVTKQSNHNDDDIDHSIDNAIETDTEYASEQVEHNNDSVHDSSSNTEGEKLEDDDKQIVENEDVSSSIKSSIIPGSKPFNVVMTPSDKKRLMDAKKFKKTNKVTVPELKPETKLERKSVSIPSSSPSVKATNNHEEHIKKNINEQSLQDNQEDETSELSNVQNENTQAISMTLNTQNEDQDENEQHESKAAIRKGPNIKLPSLELLEDPEIHQIDNSWIEEKKQELNDAFYYFNVPAEVQNVTVGPSVTRFELAVEKGVKVSRITALQDDLKMALAAKDIRIEAPIPGTSLVGIEVPNQNSSKVSLKSILESPKFKDTESKLTVAMGNRINNEPLLMDIAKTPHALIAGATGSGKSVCINSILMSLLYKNHPEELRLLLIDPKMVELAPYNDLPHLVSPVITDVKAATQSLKWAVEEMERRYKLFAKYHVRNITAFNKKASYEQRMPKIVIVIDELADLMMMAPQEVEQSIARIAQKARACGIHMLVATQRPSVNVITGLIKANIPTRIAFMVSSSVDSRTIIDSGGAERLLGYGDMLYLGSGMNKPIRVQGTFVSDEEIDDVVDFIKAQREPEYLFEEKELLKKTQTQARDELFDDVCSFMVKEGHISTSLIQRHFQIGYNRAARIVDQLEQLDYISGANGSKPRDVFITEADLKKD . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 80247 83804 . + 0 GCA_005502385.1_00109 GCA_005502385.1_00109_gene,GCA_005502385.1_00109_mRNA GCA_005502385.1_00109 hypothetical protein """""" GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MSWFDELFGNDKHSDEELLRRKNKRRHNSETQKNGEHTLLPENDDIYDRPRGKFRFPIDLGQDAETYDEAVYREVDEDEYMSQKSSKSDKEFGYGAYSYDEIDNNDYPQTYDSATDTRRRRRRQYTNHDDTGVPSIKERPSNKRNKSLNSAQLNENNNRKTTSQYHKYTNNHSHVKLQSERFKSNYKTTSNSTYHHSSFRTSEVPSAVFGTKKRRPIENGVIPPLKENENDDNHNDDKNNLTQDQTAQRVSDNDVKTNISKSKNEPLNQTKYEDTEISIINDQNSNIYETTSSKSKVPNFSQKDNTVNIENIYASQIVEEIRREREKKAQQKRKFKEALQNKRQQSSDSDNEIQKVIDEMYANQAKQYTGESSLDHEENNDEERTTHTEDSTDKMEDTNENTTDNHVIDEGTQTDSNTSNYDDDDEQYQYEEIDLKSVPNIQTVNDKDVEIREVNDTTSTDEHNDDQLSEDNLNVAPIHSTKDKHHHLNKNEDAHLSKANKLQEDNYTSKEEVEEAKYHEMNVSSNEEVTKQSNHNDDDIDHSIDNAIETDTEYASEQVEHNNDSVHDSSSNTEGEKLEDDDKQIVENEDVSSSIKSSIIPGSKPFNVVMTPSDKKRLMDAKKFKKTNKVTVPELKPETKLERKSVSIPSSSPSVKATNNHEEHIKKNINEQSLQDNQEDETSELSNVQNENTQAISMTLNTQNEDQDENEQHESKAAIRKGPNIKLPSLELLEDPEIHQIDNSWIEEKKQELNDAFYYFNVPAEVQNVTVGPSVTRFELAVEKGVKVSRITALQDDLKMALAAKDIRIEAPIPGTSLVGIEVPNQNSSKVSLKSILESPKFKDTESKLTVAMGNRINNEPLLMDIAKTPHALIAGATGSGKSVCINSILMSLLYKNHPEELRLLLIDPKMVELAPYNDLPHLVSPVITDVKAATQSLKWAVEEMERRYKLFAKYHVRNITAFNKKASYEQRMPKIVIVIDELADLMMMAPQEVEQSIARIAQKARACGIHMLVATQRPSVNVITGLIKANIPTRIAFMVSSSVDSRTIIDSGGAERLLGYGDMLYLGSGMNKPIRVQGTFVSDEEIDDVVDFIKAQREPEYLFEEKELLKKTQTQARDELFDDVCSFMVKEGHISTSLIQRHFQIGYNRAARIVDQLEQLDYISGANGSKPRDVFITEADLKKD persistent 1185 ftsK Cell division protein FtsK WP_070517607.1 UPI0008A25CC3 UniRef100_UPI0008A25CC3,UniRef50_A0A151A4B2,UniRef90_A0A3S7GXC0 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 83826 85139 . + . GCA_005502385.1_00110_gene GCA_005502385.1_00110 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTHYHFVGIKGAGMSSLAQIMHDLGHEVQGSDIEKYVFTEGALKNKGIKILPFSVDNIHEGMVVIQGNAFPDTHEEIVRAHELKLDVIRYHDFLGQVINQYTSVAVTGAHGKTSTTGLLSHVMNGDKKTSFLIGDGTGMGLPGSDYFAFEACEYRRHFLSYHPDYAIMTNIDYDHPDYFKNIDDVASAFQEMANNVKKAIIAWGDDEHLRNLKADVPIYYYGLSKNDDVYADNIQITENGTQFDVYINGEYYDQFLTPQYGNHNIQNALAVITISYLEKMDVNNIKEALETFGGVKRRFNETFVSKQVLVDDYAHHPREISATIETARKKYPNKDVVAVFQPHTFSRTQAFLDEFADALSKADHVFLCEIFGSIRENTGELTIQDLINRIDGSALIDENSIDVLEKFDNAVILFMGAGDIQKIQRAYEEKIGMSKEF . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 83826 85139 . + . GCA_005502385.1_00110_mRNA GCA_005502385.1_00110 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTHYHFVGIKGAGMSSLAQIMHDLGHEVQGSDIEKYVFTEGALKNKGIKILPFSVDNIHEGMVVIQGNAFPDTHEEIVRAHELKLDVIRYHDFLGQVINQYTSVAVTGAHGKTSTTGLLSHVMNGDKKTSFLIGDGTGMGLPGSDYFAFEACEYRRHFLSYHPDYAIMTNIDYDHPDYFKNIDDVASAFQEMANNVKKAIIAWGDDEHLRNLKADVPIYYYGLSKNDDVYADNIQITENGTQFDVYINGEYYDQFLTPQYGNHNIQNALAVITISYLEKMDVNNIKEALETFGGVKRRFNETFVSKQVLVDDYAHHPREISATIETARKKYPNKDVVAVFQPHTFSRTQAFLDEFADALSKADHVFLCEIFGSIRENTGELTIQDLINRIDGSALIDENSIDVLEKFDNAVILFMGAGDIQKIQRAYEEKIGMSKEF . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 83826 85139 . + 0 GCA_005502385.1_00110 GCA_005502385.1_00110_gene,GCA_005502385.1_00110_mRNA GCA_005502385.1_00110 UDP-N-acetylmuramate--L-alanine ligase GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MTHYHFVGIKGAGMSSLAQIMHDLGHEVQGSDIEKYVFTEGALKNKGIKILPFSVDNIHEGMVVIQGNAFPDTHEEIVRAHELKLDVIRYHDFLGQVINQYTSVAVTGAHGKTSTTGLLSHVMNGDKKTSFLIGDGTGMGLPGSDYFAFEACEYRRHFLSYHPDYAIMTNIDYDHPDYFKNIDDVASAFQEMANNVKKAIIAWGDDEHLRNLKADVPIYYYGLSKNDDVYADNIQITENGTQFDVYINGEYYDQFLTPQYGNHNIQNALAVITISYLEKMDVNNIKEALETFGGVKRRFNETFVSKQVLVDDYAHHPREISATIETARKKYPNKDVVAVFQPHTFSRTQAFLDEFADALSKADHVFLCEIFGSIRENTGELTIQDLINRIDGSALIDENSIDVLEKFDNAVILFMGAGDIQKIQRAYEEKIGMSKEF persistent 437 murC UDP-N-acetylmuramate--L-alanine ligase 6.3.2.8 GO:0005524,GO:0005737,GO:0008360,GO:0008763,GO:0009252,GO:0051301,GO:0071555 COG0773,M WP_054105811.1 UPI0006B96CBB UniRef100_UPI0006B96CBB,UniRef50_Q2FXJ0,UniRef90_Q4L784 . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka gene 85217 85714 . + . GCA_005502385.1_00111_gene GCA_005502385.1_00111 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MHWILPIAGIIAAIAFLILCIGIVVVLISVKKNLDHVAKTLDGVEGQVQGITRETTDLLHKANRLTEDIQGKVERLNSVVDGVKGIGDSVQTLNSSVDRVTNSITHNISQNEDKISQVVQWSNVAMEIADKWQNRHYRRGSANYRANSVANDANQNYTTNVEKNF . . . . . . . GCA_005502385.1|SCOV01000010.1 prokka mRNA 85217 85714 . + . GCA_005502385.1_00111_mRNA GCA_005502385.1_00111 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MHWILPIAGIIAAIAFLILCIGIVVVLISVKKNLDHVAKTLDGVEGQVQGITRETTDLLHKANRLTEDIQGKVERLNSVVDGVKGIGDSVQTLNSSVDRVTNSITHNISQNEDKISQVVQWSNVAMEIADKWQNRHYRRGSANYRANSVANDANQNYTTNVEKNF . . . . . . . GCA_005502385.1|SCOV01000010.1 Prodigal:002006 CDS 85217 85714 . + 0 GCA_005502385.1_00111 GCA_005502385.1_00111_gene,GCA_005502385.1_00111_mRNA GCA_005502385.1_00111 hypothetical protein UPF0478 protein SA1560 GCA_005502385.1 SCOV01000010.1 GCA_005502385.1|SCOV01000010.1 GCA_005502385.1_SCOV01000010.1 MHWILPIAGIIAAIAFLILCIGIVVVLISVKKNLDHVAKTLDGVEGQVQGITRETTDLLHKANRLTEDIQGKVERLNSVVDGVKGIGDSVQTLNSSVDRVTNSITHNISQNEDKISQVVQWSNVAMEIADKWQNRHYRRGSANYRANSVANDANQNYTTNVEKNF persistent 165 UPF0478 protein SH1183 GO:0005886 COG4768,S WP_002449680.1 UPI00019FCE96 UniRef100_A0A1L8Y6N8,UniRef50_Q49YH0,UniRef90_Q4L783 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 886 1368 . + . GCA_005502385.1_00112_gene GCA_005502385.1_00112 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MQLRKVTEEDLFSLIKLENEGFTPDEAATPKTLKQRINKIPDTFIIAEKEGRIIGYINGPVINQRYITDDLFEEIQPNPNSGDYLSVLGLVVNKDYQGQGTAGKLLEQFEKLAKQQLRCGVTLTCREALVSLYERYGYNNEGESTSQHAGIKWYNMVKEV . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 886 1368 . + . GCA_005502385.1_00112_mRNA GCA_005502385.1_00112 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MQLRKVTEEDLFSLIKLENEGFTPDEAATPKTLKQRINKIPDTFIIAEKEGRIIGYINGPVINQRYITDDLFEEIQPNPNSGDYLSVLGLVVNKDYQGQGTAGKLLEQFEKLAKQQLRCGVTLTCREALVSLYERYGYNNEGESTSQHAGIKWYNMVKEV . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 886 1368 . + 0 GCA_005502385.1_00112 GCA_005502385.1_00112_gene,GCA_005502385.1_00112_mRNA GCA_005502385.1_00112 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MQLRKVTEEDLFSLIKLENEGFTPDEAATPKTLKQRINKIPDTFIIAEKEGRIIGYINGPVINQRYITDDLFEEIQPNPNSGDYLSVLGLVVNKDYQGQGTAGKLLEQFEKLAKQQLRCGVTLTCREALVSLYERYGYNNEGESTSQHAGIKWYNMVKEV cloud 160 rimI N-acetyltransferase COG0456,J WP_049413993.1 UPI00066D141B UniRef100_UPI00066D141B,UniRef50_Q2FUV4,UniRef90_A0A7Z1N8D6 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 1929 2927 . - . GCA_005502385.1_00113_gene GCA_005502385.1_00113 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MRLLKKYYMFMGLGLLSIPLVFLAINSMILLCILFIEKVLGYPIGLNFKSSGLTIIFYIFFFLILITLVIIASRYVYKIVDRLRLLNDKLLDIANSDKLPNKLDIPTHINDEIDEVGQSINILIDRLRYRELEIIENKRQEQNYITQLAHDINTPLTALNLELYQLGFQYQINDNDIELSYEKINYISNLIKALPNKDDITRFYTFNHQVDIQACINTTIDKWHYLLDSKNILTILNVEGNPIYWLGDQLWYERLFDNIISNIYKHSDSSRITIFLNEDYITIQDNGIGFNDMSTKSKGLTIIKDICERFSLKLNIKSDSNGTIITIENNRE . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 1929 2927 . - . GCA_005502385.1_00113_mRNA GCA_005502385.1_00113 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MRLLKKYYMFMGLGLLSIPLVFLAINSMILLCILFIEKVLGYPIGLNFKSSGLTIIFYIFFFLILITLVIIASRYVYKIVDRLRLLNDKLLDIANSDKLPNKLDIPTHINDEIDEVGQSINILIDRLRYRELEIIENKRQEQNYITQLAHDINTPLTALNLELYQLGFQYQINDNDIELSYEKINYISNLIKALPNKDDITRFYTFNHQVDIQACINTTIDKWHYLLDSKNILTILNVEGNPIYWLGDQLWYERLFDNIISNIYKHSDSSRITIFLNEDYITIQDNGIGFNDMSTKSKGLTIIKDICERFSLKLNIKSDSNGTIITIENNRE . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 1929 2927 . - 0 GCA_005502385.1_00113 GCA_005502385.1_00113_gene,GCA_005502385.1_00113_mRNA GCA_005502385.1_00113 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MRLLKKYYMFMGLGLLSIPLVFLAINSMILLCILFIEKVLGYPIGLNFKSSGLTIIFYIFFFLILITLVIIASRYVYKIVDRLRLLNDKLLDIANSDKLPNKLDIPTHINDEIDEVGQSINILIDRLRYRELEIIENKRQEQNYITQLAHDINTPLTALNLELYQLGFQYQINDNDIELSYEKINYISNLIKALPNKDDITRFYTFNHQVDIQACINTTIDKWHYLLDSKNILTILNVEGNPIYWLGDQLWYERLFDNIISNIYKHSDSSRITIFLNEDYITIQDNGIGFNDMSTKSKGLTIIKDICERFSLKLNIKSDSNGTIITIENNRE cloud 332 baeS histidine kinase COG0642,T WP_049413992.1 UPI00066D0FC8 UniRef100_UPI00066D0FC8,UniRef50_A0A2A1K9V8,UniRef90_A0A2A1K9V8 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 2931 3587 . - . GCA_005502385.1_00114_gene GCA_005502385.1_00114 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MEGFHILLVEDDETIAKNLKQILQQKGAQVTLDRTGDSVFNVLNDVHIIIMDIMLPNNDGLSITDGIRSISTIPIIYLSARVDIDSKVKGLNNGDDYLTKPFNPRELISRINNLLTIHYADKEAQFYEFKVNAKDKIIKSNDGNQLSLTKTERRLFFYMYENRDLILTKDQIIDYVWQFESASENTLNAYVKKLRTKLLDSGTIIETIYGIGYRLNGG . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 2931 3587 . - . GCA_005502385.1_00114_mRNA GCA_005502385.1_00114 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MEGFHILLVEDDETIAKNLKQILQQKGAQVTLDRTGDSVFNVLNDVHIIIMDIMLPNNDGLSITDGIRSISTIPIIYLSARVDIDSKVKGLNNGDDYLTKPFNPRELISRINNLLTIHYADKEAQFYEFKVNAKDKIIKSNDGNQLSLTKTERRLFFYMYENRDLILTKDQIIDYVWQFESASENTLNAYVKKLRTKLLDSGTIIETIYGIGYRLNGG . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 2931 3587 . - 0 GCA_005502385.1_00114 GCA_005502385.1_00114_gene,GCA_005502385.1_00114_mRNA GCA_005502385.1_00114 Response regulator ArlR GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MEGFHILLVEDDETIAKNLKQILQQKGAQVTLDRTGDSVFNVLNDVHIIIMDIMLPNNDGLSITDGIRSISTIPIIYLSARVDIDSKVKGLNNGDDYLTKPFNPRELISRINNLLTIHYADKEAQFYEFKVNAKDKIIKSNDGNQLSLTKTERRLFFYMYENRDLILTKDQIIDYVWQFESASENTLNAYVKKLRTKLLDSGTIIETIYGIGYRLNGG cloud 218 DNA-binding response regulator WP_049413990.1 UPI00066C2F73 UniRef100_UPI00066C2F73,UniRef50_A0A2A1K6W7,UniRef90_A0A2A1K6W7 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 3609 3800 . - . GCA_005502385.1_00115_gene GCA_005502385.1_00115 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTGIISSVLLFISMGSLAIAFLTGIYEILSWLRDKDYSPTFKIPVLFFGLYVLFYIPTFILIN . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 3609 3800 . - . GCA_005502385.1_00115_mRNA GCA_005502385.1_00115 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTGIISSVLLFISMGSLAIAFLTGIYEILSWLRDKDYSPTFKIPVLFFGLYVLFYIPTFILIN . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 3609 3800 . - 0 GCA_005502385.1_00115 GCA_005502385.1_00115_gene,GCA_005502385.1_00115_mRNA GCA_005502385.1_00115 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTGIISSVLLFISMGSLAIAFLTGIYEILSWLRDKDYSPTFKIPVLFFGLYVLFYIPTFILIN cloud 63 hypothetical protein WP_049413988.1 UPI00066D03E6 UniRef100_UPI00066D03E6,UniRef50_A0A2A1K8D1,UniRef90_A0A2A1K8D1 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 4020 4643 . + . GCA_005502385.1_00116_gene GCA_005502385.1_00116 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKRLFFISIIFLVFLGGCSFSDNKDKAEGEETNNKAKATDKMKKFKIGQVVDADGVDIKVVKAEFVDNHDEYSAPVNGKALRVYIKFRNNNDDQVLMDNTDFSMKVNNENYEEWYGSEDMHEGFSHQLNQHNTASGYITYNVPDSDQYTLELDTVPNFNKVRAQWIINKSEIKNSNVTKDTSTSSTTDVEDESDTTSSSKKENDDSD . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 4020 4643 . + . GCA_005502385.1_00116_mRNA GCA_005502385.1_00116 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKRLFFISIIFLVFLGGCSFSDNKDKAEGEETNNKAKATDKMKKFKIGQVVDADGVDIKVVKAEFVDNHDEYSAPVNGKALRVYIKFRNNNDDQVLMDNTDFSMKVNNENYEEWYGSEDMHEGFSHQLNQHNTASGYITYNVPDSDQYTLELDTVPNFNKVRAQWIINKSEIKNSNVTKDTSTSSTTDVEDESDTTSSSKKENDDSD . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 4020 4643 . + 0 GCA_005502385.1_00116 GCA_005502385.1_00116_gene,GCA_005502385.1_00116_mRNA GCA_005502385.1_00116 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKRLFFISIIFLVFLGGCSFSDNKDKAEGEETNNKAKATDKMKKFKIGQVVDADGVDIKVVKAEFVDNHDEYSAPVNGKALRVYIKFRNNNDDQVLMDNTDFSMKVNNENYEEWYGSEDMHEGFSHQLNQHNTASGYITYNVPDSDQYTLELDTVPNFNKVRAQWIINKSEIKNSNVTKDTSTSSTTDVEDESDTTSSSKKENDDSD cloud 207 DUF4352 domain-containing protein WP_235063263.1 UPI000B1CD061 UniRef100_UPI000B1CD061,UniRef50_UPI000B1CD061,UniRef90_UPI000B1CD061 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 4747 5010 . + . GCA_005502385.1_00117_gene GCA_005502385.1_00117 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MLEIEYDQLEDRVAALYEKENAKAEKEYEKAMQDYEDQLAQEEYEQQQAEQVENEASESDDNSNGPGSDDPSLDSGTEDTFSEDDAA . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 4747 5010 . + . GCA_005502385.1_00117_mRNA GCA_005502385.1_00117 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MLEIEYDQLEDRVAALYEKENAKAEKEYEKAMQDYEDQLAQEEYEQQQAEQVENEASESDDNSNGPGSDDPSLDSGTEDTFSEDDAA . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 4747 5010 . + 0 GCA_005502385.1_00117 GCA_005502385.1_00117_gene,GCA_005502385.1_00117_mRNA GCA_005502385.1_00117 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MLEIEYDQLEDRVAALYEKENAKAEKEYEKAMQDYEDQLAQEEYEQQQAEQVENEASESDDNSNGPGSDDPSLDSGTEDTFSEDDAA cloud 87 hypothetical protein WP_235063264.1 UPI0009CE825E UniRef100_UPI0009CE825E,UniRef50_UPI0009CE825E,UniRef90_UPI0009CE825E . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 5025 5429 . + . GCA_005502385.1_00118_gene GCA_005502385.1_00118 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MEHNYMNEPKPTNRIIEKILGITGSIFGIIGGLIALILTNYDKSYGSELVGLMTIVATSSIILSAITLTLSCLINKRRVLIGIILIVAAIIHIYLLGFFGYLSGILILVAGIIALVRKQFDRIKGTMTKFLLFF . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 5025 5429 . + . GCA_005502385.1_00118_mRNA GCA_005502385.1_00118 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MEHNYMNEPKPTNRIIEKILGITGSIFGIIGGLIALILTNYDKSYGSELVGLMTIVATSSIILSAITLTLSCLINKRRVLIGIILIVAAIIHIYLLGFFGYLSGILILVAGIIALVRKQFDRIKGTMTKFLLFF . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 5025 5429 . + 0 GCA_005502385.1_00118 GCA_005502385.1_00118_gene,GCA_005502385.1_00118_mRNA GCA_005502385.1_00118 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MEHNYMNEPKPTNRIIEKILGITGSIFGIIGGLIALILTNYDKSYGSELVGLMTIVATSSIILSAITLTLSCLINKRRVLIGIILIVAAIIHIYLLGFFGYLSGILILVAGIIALVRKQFDRIKGTMTKFLLFF cloud 134 DUF4064 domain-containing protein WP_049413987.1 UPI00066A7565 UniRef100_UPI00066A7565,UniRef50_A0A7Z1N385,UniRef90_A0A2A1K912 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 5456 5932 . + . GCA_005502385.1_00119_gene GCA_005502385.1_00119 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 METVYIAGGCLWGVQAFIKTLPGVLSTEAGRANGISETLSDKYDGYAECVKTTFNPMQTSITDLMNYLFEIIDPYSINKQGVDEGLKYRTGVYSEIESHLKEAQQFIQQRSDRDKIVVEVLPLESYVKSADEHQDRLDKQPEDISLCHISKSILNKYN . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 5456 5932 . + . GCA_005502385.1_00119_mRNA GCA_005502385.1_00119 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 METVYIAGGCLWGVQAFIKTLPGVLSTEAGRANGISETLSDKYDGYAECVKTTFNPMQTSITDLMNYLFEIIDPYSINKQGVDEGLKYRTGVYSEIESHLKEAQQFIQQRSDRDKIVVEVLPLESYVKSADEHQDRLDKQPEDISLCHISKSILNKYN . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 5456 5932 . + 0 GCA_005502385.1_00119 GCA_005502385.1_00119_gene,GCA_005502385.1_00119_mRNA GCA_005502385.1_00119 Peptide methionine sulfoxide reductase msrA/msrB GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 METVYIAGGCLWGVQAFIKTLPGVLSTEAGRANGISETLSDKYDGYAECVKTTFNPMQTSITDLMNYLFEIIDPYSINKQGVDEGLKYRTGVYSEIESHLKEAQQFIQQRSDRDKIVVEVLPLESYVKSADEHQDRLDKQPEDISLCHISKSILNKYN persistent 158 peptide-methionine (S)-S-oxide reductase 1.8.4.11 GO:0008113 WP_049413986.1 UPI00066E7344 UniRef100_UPI00066E7344,UniRef50_M7NDY9,UniRef90_UPI001F56E7BB . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 5983 6336 . - . GCA_005502385.1_00120_gene GCA_005502385.1_00120 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MILRYATNLKLAKDLYAASKRKLTGNPYTKQLFTQDFKLSERAMKLAGVIEFIASGLFATSVLHKNISRLGSLVTFSVLSVAVYKRLEAGHGKVGAQHALDLLGLAALSLIDTFSKK . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 5983 6336 . - . GCA_005502385.1_00120_mRNA GCA_005502385.1_00120 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MILRYATNLKLAKDLYAASKRKLTGNPYTKQLFTQDFKLSERAMKLAGVIEFIASGLFATSVLHKNISRLGSLVTFSVLSVAVYKRLEAGHGKVGAQHALDLLGLAALSLIDTFSKK . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 5983 6336 . - 0 GCA_005502385.1_00120 GCA_005502385.1_00120_gene,GCA_005502385.1_00120_mRNA GCA_005502385.1_00120 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MILRYATNLKLAKDLYAASKRKLTGNPYTKQLFTQDFKLSERAMKLAGVIEFIASGLFATSVLHKNISRLGSLVTFSVLSVAVYKRLEAGHGKVGAQHALDLLGLAALSLIDTFSKK persistent 117 doxX DoxX family protein WP_002449196.1 UPI00019FC646 UniRef100_A0A4Q9WR97,UniRef50_A0A7V7VGH4,UniRef90_A0A3S7GW00 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 6474 6827 . - . GCA_005502385.1_00121_gene GCA_005502385.1_00121 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MILRYAANLKLAKELYDSSKPKLQGSQEMIDTFKNVFGLPEKSVKLAGTVEATAAALFAASFLNKNISRLGSIATFGVLGVAAYKHFEAGHGKEGAQHALDLLGLAALSFADTFGKN . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 6474 6827 . - . GCA_005502385.1_00121_mRNA GCA_005502385.1_00121 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MILRYAANLKLAKELYDSSKPKLQGSQEMIDTFKNVFGLPEKSVKLAGTVEATAAALFAASFLNKNISRLGSIATFGVLGVAAYKHFEAGHGKEGAQHALDLLGLAALSFADTFGKN . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 6474 6827 . - 0 GCA_005502385.1_00121 GCA_005502385.1_00121_gene,GCA_005502385.1_00121_mRNA GCA_005502385.1_00121 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MILRYAANLKLAKELYDSSKPKLQGSQEMIDTFKNVFGLPEKSVKLAGTVEATAAALFAASFLNKNISRLGSIATFGVLGVAAYKHFEAGHGKEGAQHALDLLGLAALSFADTFGKN persistent 117 doxX DoxX family protein WP_002449545.1 UPI00019FC645 UniRef100_A0A1L8Y959,UniRef50_A0A7V7VGH4,UniRef90_A0A1L8Y959 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 7040 8218 . + . GCA_005502385.1_00122_gene GCA_005502385.1_00122 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 METSMNYNRMTTIFFISGIIVMASLYTALPLTSVFAKDFGISNAVASLNGVIFSITYSLSCLFYGTISEKFGRIRTILFGLIGLVIICLLIGFIHSFTLLIILRAIQGICAAAFSPVSITYVTETYSPVKRVTAISFISTSFMLSGVIGQNLSEIVVRYTNWHMVYFILTLLYIFIAVLIYKYIPESPVKNPQLKLVGFFTNFKDFKDNKIVTLCYLISLSLLTMFISMYTIFNHYITSDIVGGSEATAINAKLFGIIGMLLSLLAGRMSDRTGVKHVIVGSLIVSIVSLILMGFTTNVILLVIWSVLFVGGIAFAIPSTISKVGMVVNRNQGFFLSVNTFILFLGTAIAPLLMILIQPLSNFTLQFIIIAVIGVIALIVALLLPRRKNVIR . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 7040 8218 . + . GCA_005502385.1_00122_mRNA GCA_005502385.1_00122 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 METSMNYNRMTTIFFISGIIVMASLYTALPLTSVFAKDFGISNAVASLNGVIFSITYSLSCLFYGTISEKFGRIRTILFGLIGLVIICLLIGFIHSFTLLIILRAIQGICAAAFSPVSITYVTETYSPVKRVTAISFISTSFMLSGVIGQNLSEIVVRYTNWHMVYFILTLLYIFIAVLIYKYIPESPVKNPQLKLVGFFTNFKDFKDNKIVTLCYLISLSLLTMFISMYTIFNHYITSDIVGGSEATAINAKLFGIIGMLLSLLAGRMSDRTGVKHVIVGSLIVSIVSLILMGFTTNVILLVIWSVLFVGGIAFAIPSTISKVGMVVNRNQGFFLSVNTFILFLGTAIAPLLMILIQPLSNFTLQFIIIAVIGVIALIVALLLPRRKNVIR . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 7040 8218 . + 0 GCA_005502385.1_00122 GCA_005502385.1_00122_gene,GCA_005502385.1_00122_mRNA GCA_005502385.1_00122 Inner membrane transport protein YnfM GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 METSMNYNRMTTIFFISGIIVMASLYTALPLTSVFAKDFGISNAVASLNGVIFSITYSLSCLFYGTISEKFGRIRTILFGLIGLVIICLLIGFIHSFTLLIILRAIQGICAAAFSPVSITYVTETYSPVKRVTAISFISTSFMLSGVIGQNLSEIVVRYTNWHMVYFILTLLYIFIAVLIYKYIPESPVKNPQLKLVGFFTNFKDFKDNKIVTLCYLISLSLLTMFISMYTIFNHYITSDIVGGSEATAINAKLFGIIGMLLSLLAGRMSDRTGVKHVIVGSLIVSIVSLILMGFTTNVILLVIWSVLFVGGIAFAIPSTISKVGMVVNRNQGFFLSVNTFILFLGTAIAPLLMILIQPLSNFTLQFIIIAVIGVIALIVALLLPRRKNVIR persistent 392 MFS transporter WP_049420774.1 UPI00066B2E5F UniRef100_UPI00066B2E5F,UniRef50_A0A853V6A1,UniRef90_A0A3S7GYM2 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 8547 9107 . - . GCA_005502385.1_00123_gene GCA_005502385.1_00123 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MPTPNQKRMIKHINATVFKLLQDYHFDEITIQKICDLAEINRSTFYRYFQDKYDLLFSLPDYIATEFQHEDTRPFASTEESFQQFIYFIGDHKKVFKHLLTSSRQADVSRNLTHVSRELMLDSIKSQNDPLALKIKHSHHPEIIADFYSSGLIEVLRRWVENDYNYSVDEIFATLHDILEISLNCK . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 8547 9107 . - . GCA_005502385.1_00123_mRNA GCA_005502385.1_00123 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MPTPNQKRMIKHINATVFKLLQDYHFDEITIQKICDLAEINRSTFYRYFQDKYDLLFSLPDYIATEFQHEDTRPFASTEESFQQFIYFIGDHKKVFKHLLTSSRQADVSRNLTHVSRELMLDSIKSQNDPLALKIKHSHHPEIIADFYSSGLIEVLRRWVENDYNYSVDEIFATLHDILEISLNCK . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 8547 9107 . - 0 GCA_005502385.1_00123 GCA_005502385.1_00123_gene,GCA_005502385.1_00123_mRNA GCA_005502385.1_00123 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MPTPNQKRMIKHINATVFKLLQDYHFDEITIQKICDLAEINRSTFYRYFQDKYDLLFSLPDYIATEFQHEDTRPFASTEESFQQFIYFIGDHKKVFKHLLTSSRQADVSRNLTHVSRELMLDSIKSQNDPLALKIKHSHHPEIIADFYSSGLIEVLRRWVENDYNYSVDEIFATLHDILEISLNCK shell 186 TetR/AcrR family transcriptional regulator WP_137689722.1 UPI0010F7434E UniRef100_UPI0010F7434E,UniRef50_Q4L9L6,UniRef90_A0A6N0I2K4 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 9291 10232 . - . GCA_005502385.1_00124_gene GCA_005502385.1_00124 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MLKSRVSKFLALLATLTLAIVLSACGNSQSNSSTQSKTELGDKTIEIPYIASDNSTARSLVIAEVLKKAGYDVTTTPVPASGPLYATVSASDDAFHASGIFPETDKRYYDKFKDTLTLYDDKHLIDHVNVGLAVPKYVQNIDSIKDLKDDKDFGKSVDWTIQGTDNRNGVMQQTNDELDRDDLSKYSLDKSSDQEQFKKIQKAYQQQQPILFTSMEPNWFSKELDVKMLKDPDKIYGNNKQHIDLVFNHNFKEKHPAAYDIATRIAKDWDQKDEDRLAKNIFVKSKNPEQVAKDYVDNHDHNVDDWLKDIDTK . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 9291 10232 . - . GCA_005502385.1_00124_mRNA GCA_005502385.1_00124 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MLKSRVSKFLALLATLTLAIVLSACGNSQSNSSTQSKTELGDKTIEIPYIASDNSTARSLVIAEVLKKAGYDVTTTPVPASGPLYATVSASDDAFHASGIFPETDKRYYDKFKDTLTLYDDKHLIDHVNVGLAVPKYVQNIDSIKDLKDDKDFGKSVDWTIQGTDNRNGVMQQTNDELDRDDLSKYSLDKSSDQEQFKKIQKAYQQQQPILFTSMEPNWFSKELDVKMLKDPDKIYGNNKQHIDLVFNHNFKEKHPAAYDIATRIAKDWDQKDEDRLAKNIFVKSKNPEQVAKDYVDNHDHNVDDWLKDIDTK . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 9291 10232 . - 0 GCA_005502385.1_00124 GCA_005502385.1_00124_gene,GCA_005502385.1_00124_mRNA GCA_005502385.1_00124 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MLKSRVSKFLALLATLTLAIVLSACGNSQSNSSTQSKTELGDKTIEIPYIASDNSTARSLVIAEVLKKAGYDVTTTPVPASGPLYATVSASDDAFHASGIFPETDKRYYDKFKDTLTLYDDKHLIDHVNVGLAVPKYVQNIDSIKDLKDDKDFGKSVDWTIQGTDNRNGVMQQTNDELDRDDLSKYSLDKSSDQEQFKKIQKAYQQQQPILFTSMEPNWFSKELDVKMLKDPDKIYGNNKQHIDLVFNHNFKEKHPAAYDIATRIAKDWDQKDEDRLAKNIFVKSKNPEQVAKDYVDNHDHNVDDWLKDIDTK shell 313 ABC transporter substrate-binding protein WP_049413980.1 UPI00066CA52C UniRef100_UPI00066CA52C,UniRef50_A0A1E9A6E3,UniRef90_A0A6N0I4K2 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 10232 12775 . - . GCA_005502385.1_00125_gene GCA_005502385.1_00125 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MANLLYKLGTFIAKHKWLSIIIWLVVLGVVIAPLLVTSPKFDSDIKMNGLKSIDTNDKISKEFHQDSEKASMKIVFHSNKEDGLKDKTTKKDIEDALDNIKQDDDYIQNISNPYESGQVNSEGDTAIANISYVVPQTSMQDSSKKIVNKALQDIKDNHNIQIEKTTGMSMGSEPGGVSEIVGIVVAFIILLITFGSLIAAGMPIISAILGLATSVGMISLLTFMFDIPNFTLTLAVMIGLAVGIDYSLFILFRYKEIKKSGTATVEAIGKAVGTAGSAVIFAGITVMMAVCGLSLVGIDFLAIMGFASAISVLFAVLAALTLLPALISIFHKSIKIKNKPTKNKDPKHHPWAKFVVGKPVLATIISLVILILAIIPITGMRLGIPDDSLKPNDSSEHKAYQLISDNFGEGYNGQIVMLVNTKDGGSKTSIENDLSNMRRDIEDLDNVDTVSKAQLNGNNHYAIFTIIPNEGPNAKSTTDLVYELRDYHKDAEDKYHYDTEISGQSVINIDMSEKLNDAIPVFASVIVILAFILLMIVFRSILVPLKAVLGFVLSLMATLGFTTLVMQDGVMSGLFGVDNTGPLLAFLPVITIGLLFGLAIDYELFLMTRVHEEYSKTGDNDHSIRVGIKESGPVIVAAALIMFSVFIAFIFQDDTAIKSMGLSLAFGVLFDAFIVRMTLIPALTKLFGNASWYLPKWLGVILPKIDVEGKALEEHHEPSTSNYKHSEAPRYREFVDTQDVSYQHQNRSYATHSNNYNAYDDVDYEALYTEEGTPETVHSKRQEQHDTTTYFDKTTHLYKDLTDNNTEQDVLFKALMLYAREHNQHVYDKYQTSHTDNRKDDQGGERY . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 10232 12775 . - . GCA_005502385.1_00125_mRNA GCA_005502385.1_00125 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MANLLYKLGTFIAKHKWLSIIIWLVVLGVVIAPLLVTSPKFDSDIKMNGLKSIDTNDKISKEFHQDSEKASMKIVFHSNKEDGLKDKTTKKDIEDALDNIKQDDDYIQNISNPYESGQVNSEGDTAIANISYVVPQTSMQDSSKKIVNKALQDIKDNHNIQIEKTTGMSMGSEPGGVSEIVGIVVAFIILLITFGSLIAAGMPIISAILGLATSVGMISLLTFMFDIPNFTLTLAVMIGLAVGIDYSLFILFRYKEIKKSGTATVEAIGKAVGTAGSAVIFAGITVMMAVCGLSLVGIDFLAIMGFASAISVLFAVLAALTLLPALISIFHKSIKIKNKPTKNKDPKHHPWAKFVVGKPVLATIISLVILILAIIPITGMRLGIPDDSLKPNDSSEHKAYQLISDNFGEGYNGQIVMLVNTKDGGSKTSIENDLSNMRRDIEDLDNVDTVSKAQLNGNNHYAIFTIIPNEGPNAKSTTDLVYELRDYHKDAEDKYHYDTEISGQSVINIDMSEKLNDAIPVFASVIVILAFILLMIVFRSILVPLKAVLGFVLSLMATLGFTTLVMQDGVMSGLFGVDNTGPLLAFLPVITIGLLFGLAIDYELFLMTRVHEEYSKTGDNDHSIRVGIKESGPVIVAAALIMFSVFIAFIFQDDTAIKSMGLSLAFGVLFDAFIVRMTLIPALTKLFGNASWYLPKWLGVILPKIDVEGKALEEHHEPSTSNYKHSEAPRYREFVDTQDVSYQHQNRSYATHSNNYNAYDDVDYEALYTEEGTPETVHSKRQEQHDTTTYFDKTTHLYKDLTDNNTEQDVLFKALMLYAREHNQHVYDKYQTSHTDNRKDDQGGERY . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 10232 12775 . - 0 GCA_005502385.1_00125 GCA_005502385.1_00125_gene,GCA_005502385.1_00125_mRNA GCA_005502385.1_00125 Membrane protein YdfJ GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MANLLYKLGTFIAKHKWLSIIIWLVVLGVVIAPLLVTSPKFDSDIKMNGLKSIDTNDKISKEFHQDSEKASMKIVFHSNKEDGLKDKTTKKDIEDALDNIKQDDDYIQNISNPYESGQVNSEGDTAIANISYVVPQTSMQDSSKKIVNKALQDIKDNHNIQIEKTTGMSMGSEPGGVSEIVGIVVAFIILLITFGSLIAAGMPIISAILGLATSVGMISLLTFMFDIPNFTLTLAVMIGLAVGIDYSLFILFRYKEIKKSGTATVEAIGKAVGTAGSAVIFAGITVMMAVCGLSLVGIDFLAIMGFASAISVLFAVLAALTLLPALISIFHKSIKIKNKPTKNKDPKHHPWAKFVVGKPVLATIISLVILILAIIPITGMRLGIPDDSLKPNDSSEHKAYQLISDNFGEGYNGQIVMLVNTKDGGSKTSIENDLSNMRRDIEDLDNVDTVSKAQLNGNNHYAIFTIIPNEGPNAKSTTDLVYELRDYHKDAEDKYHYDTEISGQSVINIDMSEKLNDAIPVFASVIVILAFILLMIVFRSILVPLKAVLGFVLSLMATLGFTTLVMQDGVMSGLFGVDNTGPLLAFLPVITIGLLFGLAIDYELFLMTRVHEEYSKTGDNDHSIRVGIKESGPVIVAAALIMFSVFIAFIFQDDTAIKSMGLSLAFGVLFDAFIVRMTLIPALTKLFGNASWYLPKWLGVILPKIDVEGKALEEHHEPSTSNYKHSEAPRYREFVDTQDVSYQHQNRSYATHSNNYNAYDDVDYEALYTEEGTPETVHSKRQEQHDTTTYFDKTTHLYKDLTDNNTEQDVLFKALMLYAREHNQHVYDKYQTSHTDNRKDDQGGERY shell 847 SSD domain-containing protein WP_049420777.1 UPI00066C9271 UniRef100_UPI00066C9271,UniRef50_A0A2A4GX54,UniRef90_A0AAE5MY84 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 13017 13184 . - . GCA_005502385.1_00126_gene GCA_005502385.1_00126 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MLILSIILLVVGIILISISSFVAYRQDIDLREKIYLPGVLFVLIGAICLIGYFVA . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 13017 13184 . - . GCA_005502385.1_00126_mRNA GCA_005502385.1_00126 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MLILSIILLVVGIILISISSFVAYRQDIDLREKIYLPGVLFVLIGAICLIGYFVA . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 13017 13184 . - 0 GCA_005502385.1_00126 GCA_005502385.1_00126_gene,GCA_005502385.1_00126_mRNA GCA_005502385.1_00126 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MLILSIILLVVGIILISISSFVAYRQDIDLREKIYLPGVLFVLIGAICLIGYFVA persistent 55 Mid2-like cell wall stress sensor domain protein WP_002449294.1 UPI00019FC640 UniRef100_UPI00019FC640,UniRef50_A0A8X8GXC7,UniRef90_A0A8X8GXC7 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 13438 14322 . - . GCA_005502385.1_00127_gene GCA_005502385.1_00127 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNTKQMMIFKNFVELQNENAVAEKLGITQPTVTFHLKNLNNELGIPLYFKKGKCFNLTDAGDLLYRNSNKMLNLIDETTHMIEEFKQSKRGTLRVGASHAPIYSILPTTLKKYMHDYPNIDMNLIVDTAPMILKKIKDREIDIGVISEKGFNEKELKVKRLQENPLVIAMDKRHPLASKTDISLEDLNAYRFIIHSSGSTRESIDDWRKNNFIDLNVHMESNSISSILTIIKDSNYLSLVSQSTLFHHPNIIGKSLKEGPPSSYISIVYRADHHLTALIQNFMTLIYSLKNESI . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 13438 14322 . - . GCA_005502385.1_00127_mRNA GCA_005502385.1_00127 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNTKQMMIFKNFVELQNENAVAEKLGITQPTVTFHLKNLNNELGIPLYFKKGKCFNLTDAGDLLYRNSNKMLNLIDETTHMIEEFKQSKRGTLRVGASHAPIYSILPTTLKKYMHDYPNIDMNLIVDTAPMILKKIKDREIDIGVISEKGFNEKELKVKRLQENPLVIAMDKRHPLASKTDISLEDLNAYRFIIHSSGSTRESIDDWRKNNFIDLNVHMESNSISSILTIIKDSNYLSLVSQSTLFHHPNIIGKSLKEGPPSSYISIVYRADHHLTALIQNFMTLIYSLKNESI . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 13438 14322 . - 0 GCA_005502385.1_00127 GCA_005502385.1_00127_gene,GCA_005502385.1_00127_mRNA GCA_005502385.1_00127 HTH-type transcriptional regulator CysL GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNTKQMMIFKNFVELQNENAVAEKLGITQPTVTFHLKNLNNELGIPLYFKKGKCFNLTDAGDLLYRNSNKMLNLIDETTHMIEEFKQSKRGTLRVGASHAPIYSILPTTLKKYMHDYPNIDMNLIVDTAPMILKKIKDREIDIGVISEKGFNEKELKVKRLQENPLVIAMDKRHPLASKTDISLEDLNAYRFIIHSSGSTRESIDDWRKNNFIDLNVHMESNSISSILTIIKDSNYLSLVSQSTLFHHPNIIGKSLKEGPPSSYISIVYRADHHLTALIQNFMTLIYSLKNESI persistent 294 lysR LysR family transcriptional regulator WP_002449315.1 UPI00019FC63F UniRef100_UPI00019FC63F,UniRef50_Q4L9L2,UniRef90_A0A3S7GZM1 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 14579 15190 . + . GCA_005502385.1_00128_gene GCA_005502385.1_00128 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSERLLVISDIHGHRKALATLLKRAKYNPKKDQLVLMGDYVNNGPDSFGTLKLVKRLKRRGAIALAGNHEMRWLNSKNKKIKRWHAFLRELSAVEVIGNYIFAHAGIDTNKPLNKQIKEYTTGHYSHSLNRQIPKNKYLVHGHVPNYRYGLKKDDIYKNKNELSIDTGAGHNKFLSLIDLTGQYQYSVEVTNIRKMNIKRLKI . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 14579 15190 . + . GCA_005502385.1_00128_mRNA GCA_005502385.1_00128 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSERLLVISDIHGHRKALATLLKRAKYNPKKDQLVLMGDYVNNGPDSFGTLKLVKRLKRRGAIALAGNHEMRWLNSKNKKIKRWHAFLRELSAVEVIGNYIFAHAGIDTNKPLNKQIKEYTTGHYSHSLNRQIPKNKYLVHGHVPNYRYGLKKDDIYKNKNELSIDTGAGHNKFLSLIDLTGQYQYSVEVTNIRKMNIKRLKI . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 14579 15190 . + 0 GCA_005502385.1_00128 GCA_005502385.1_00128_gene,GCA_005502385.1_00128_mRNA GCA_005502385.1_00128 Bis(5'-nucleosyl)-tetraphosphatase%2C symmetrical GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSERLLVISDIHGHRKALATLLKRAKYNPKKDQLVLMGDYVNNGPDSFGTLKLVKRLKRRGAIALAGNHEMRWLNSKNKKIKRWHAFLRELSAVEVIGNYIFAHAGIDTNKPLNKQIKEYTTGHYSHSLNRQIPKNKYLVHGHVPNYRYGLKKDDIYKNKNELSIDTGAGHNKFLSLIDLTGQYQYSVEVTNIRKMNIKRLKI persistent 203 Metallophosphoesterase WP_037541724.1 UPI00045253C0 UniRef100_A0A3S7GV78,UniRef50_A0A380FVF7,UniRef90_A0A8X8GIR6 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 15309 17504 . + . GCA_005502385.1_00129_gene GCA_005502385.1_00129 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNKNTQNENRKMSKLSSYLKVSCSALILSSSLVGYGFTKDAFAATQDAETATSETSTHVQKDLQDAINKAKKDIKQLKHLSAVELKSYKEDIESAKNQTEIKNIIKEAKKENKATAQENTTDVSNKDNSTESSSTQDASTEEKATTSHDTSADDTSNISNDLDNIVSDLDVLSNKVDSGQQKDATTSNESSSSESNTSENTTDEVTKEESTTEESSKEAPTTEDPSNQPTSSKSETSIVDKLDSIKNDIDSAKKDMESSKENNSNQLPSDDNNTEEATTESSSTQEAPTTEDTTHSNSNHHVLDELAKLNNTHKDQDLDTDVRHHQFDKVNHQLSETEKINQAIAKIENSKDDASHLYINRKLDQLSDLRDKIQNQADLAKKDKQAIDNDIETVRKNIENNRDIILNRLQQASDKQHAVEDILNSVFSKNEAQHILKNIKTKGQSDKQIADQIMKQIDGLTSTTSDDILKSMLEQATNKEDLLKTILSTRLGQNEAATIAKRLANDHLTNSQIVDRLKQAFNQHGLVSSDDILNDILDKTSNRKQAIETMLATKLNQAKAKVLADIISRVQSDKANALDLVKSTINGKANDLLQLQNSLGQAKNRLNYILDPIVNRPSLLDRITGNTSGSNLGSSLLGNLPSGSSLLDGLTNGNSLLDGISDIPNPTQGLSLGHLGDDGLLSGLFNSDGNLSLPATGEAIKKNWIPIAAVIAIAGGALVWFSRRKHHQSNN . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 15309 17504 . + . GCA_005502385.1_00129_mRNA GCA_005502385.1_00129 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNKNTQNENRKMSKLSSYLKVSCSALILSSSLVGYGFTKDAFAATQDAETATSETSTHVQKDLQDAINKAKKDIKQLKHLSAVELKSYKEDIESAKNQTEIKNIIKEAKKENKATAQENTTDVSNKDNSTESSSTQDASTEEKATTSHDTSADDTSNISNDLDNIVSDLDVLSNKVDSGQQKDATTSNESSSSESNTSENTTDEVTKEESTTEESSKEAPTTEDPSNQPTSSKSETSIVDKLDSIKNDIDSAKKDMESSKENNSNQLPSDDNNTEEATTESSSTQEAPTTEDTTHSNSNHHVLDELAKLNNTHKDQDLDTDVRHHQFDKVNHQLSETEKINQAIAKIENSKDDASHLYINRKLDQLSDLRDKIQNQADLAKKDKQAIDNDIETVRKNIENNRDIILNRLQQASDKQHAVEDILNSVFSKNEAQHILKNIKTKGQSDKQIADQIMKQIDGLTSTTSDDILKSMLEQATNKEDLLKTILSTRLGQNEAATIAKRLANDHLTNSQIVDRLKQAFNQHGLVSSDDILNDILDKTSNRKQAIETMLATKLNQAKAKVLADIISRVQSDKANALDLVKSTINGKANDLLQLQNSLGQAKNRLNYILDPIVNRPSLLDRITGNTSGSNLGSSLLGNLPSGSSLLDGLTNGNSLLDGISDIPNPTQGLSLGHLGDDGLLSGLFNSDGNLSLPATGEAIKKNWIPIAAVIAIAGGALVWFSRRKHHQSNN . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 15309 17504 . + 0 GCA_005502385.1_00129 GCA_005502385.1_00129_gene,GCA_005502385.1_00129_mRNA GCA_005502385.1_00129 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNKNTQNENRKMSKLSSYLKVSCSALILSSSLVGYGFTKDAFAATQDAETATSETSTHVQKDLQDAINKAKKDIKQLKHLSAVELKSYKEDIESAKNQTEIKNIIKEAKKENKATAQENTTDVSNKDNSTESSSTQDASTEEKATTSHDTSADDTSNISNDLDNIVSDLDVLSNKVDSGQQKDATTSNESSSSESNTSENTTDEVTKEESTTEESSKEAPTTEDPSNQPTSSKSETSIVDKLDSIKNDIDSAKKDMESSKENNSNQLPSDDNNTEEATTESSSTQEAPTTEDTTHSNSNHHVLDELAKLNNTHKDQDLDTDVRHHQFDKVNHQLSETEKINQAIAKIENSKDDASHLYINRKLDQLSDLRDKIQNQADLAKKDKQAIDNDIETVRKNIENNRDIILNRLQQASDKQHAVEDILNSVFSKNEAQHILKNIKTKGQSDKQIADQIMKQIDGLTSTTSDDILKSMLEQATNKEDLLKTILSTRLGQNEAATIAKRLANDHLTNSQIVDRLKQAFNQHGLVSSDDILNDILDKTSNRKQAIETMLATKLNQAKAKVLADIISRVQSDKANALDLVKSTINGKANDLLQLQNSLGQAKNRLNYILDPIVNRPSLLDRITGNTSGSNLGSSLLGNLPSGSSLLDGLTNGNSLLDGISDIPNPTQGLSLGHLGDDGLLSGLFNSDGNLSLPATGEAIKKNWIPIAAVIAIAGGALVWFSRRKHHQSNN persistent 731 Cell wall anchor protein WP_048761883.1 UPI00065FD601 UniRef100_UPI00065FD601,UniRef50_A0A2A1K996,UniRef90_A0A974QMP8 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 17776 19353 . + . GCA_005502385.1_00130_gene GCA_005502385.1_00130 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MEHSERVSHIASDKKEKKRFRLKMPGAFTILFILTIIAVLATWIVPAGAYSKLSYNPGAHEFKIVDAHHKTTTVPGTQEQLDKLGVKIDVNQFKSGAINKPISIPGTYERLKQKPAGPDQITTSMVNGTIEAVDVMVFILVLGGLIGVVQTSGAFESGLLALTKKTKGHEFLLVFMVSILMILGGTLCGIEEEAVAFYPVLVPIFIAMGYDSIICVGSIFLASSIGSTFSTVNPFSVVIASNAAGTTFVDGLYWRIAGLIVATIFTIGYLYWYAKRIKKNPKRSYTYDDKVKFERQWSVIKNNGEDSIFTLREKIILILFILPFPIMVWGVMTQGWWFPIMASMFLAFTIVIMLIVALGKNGLGEKKVVDAFVNGASSLVGVSLIIGLARGINRIMNDGLISDTVLNFSSSLVKHVNGPLFILVLLIIFFFLGFIIPSSSGLAVLAMPIFAPLADTVGIPRFVIVTAYQFGQYAMLFLAPTGLIMATLQMLDMKYSHWFKFVWPIVVFVFIFGGGLLVAQVLVYS . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 17776 19353 . + . GCA_005502385.1_00130_mRNA GCA_005502385.1_00130 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MEHSERVSHIASDKKEKKRFRLKMPGAFTILFILTIIAVLATWIVPAGAYSKLSYNPGAHEFKIVDAHHKTTTVPGTQEQLDKLGVKIDVNQFKSGAINKPISIPGTYERLKQKPAGPDQITTSMVNGTIEAVDVMVFILVLGGLIGVVQTSGAFESGLLALTKKTKGHEFLLVFMVSILMILGGTLCGIEEEAVAFYPVLVPIFIAMGYDSIICVGSIFLASSIGSTFSTVNPFSVVIASNAAGTTFVDGLYWRIAGLIVATIFTIGYLYWYAKRIKKNPKRSYTYDDKVKFERQWSVIKNNGEDSIFTLREKIILILFILPFPIMVWGVMTQGWWFPIMASMFLAFTIVIMLIVALGKNGLGEKKVVDAFVNGASSLVGVSLIIGLARGINRIMNDGLISDTVLNFSSSLVKHVNGPLFILVLLIIFFFLGFIIPSSSGLAVLAMPIFAPLADTVGIPRFVIVTAYQFGQYAMLFLAPTGLIMATLQMLDMKYSHWFKFVWPIVVFVFIFGGGLLVAQVLVYS . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 17776 19353 . + 0 GCA_005502385.1_00130 GCA_005502385.1_00130_gene,GCA_005502385.1_00130_mRNA GCA_005502385.1_00130 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MEHSERVSHIASDKKEKKRFRLKMPGAFTILFILTIIAVLATWIVPAGAYSKLSYNPGAHEFKIVDAHHKTTTVPGTQEQLDKLGVKIDVNQFKSGAINKPISIPGTYERLKQKPAGPDQITTSMVNGTIEAVDVMVFILVLGGLIGVVQTSGAFESGLLALTKKTKGHEFLLVFMVSILMILGGTLCGIEEEAVAFYPVLVPIFIAMGYDSIICVGSIFLASSIGSTFSTVNPFSVVIASNAAGTTFVDGLYWRIAGLIVATIFTIGYLYWYAKRIKKNPKRSYTYDDKVKFERQWSVIKNNGEDSIFTLREKIILILFILPFPIMVWGVMTQGWWFPIMASMFLAFTIVIMLIVALGKNGLGEKKVVDAFVNGASSLVGVSLIIGLARGINRIMNDGLISDTVLNFSSSLVKHVNGPLFILVLLIIFFFLGFIIPSSSGLAVLAMPIFAPLADTVGIPRFVIVTAYQFGQYAMLFLAPTGLIMATLQMLDMKYSHWFKFVWPIVVFVFIFGGGLLVAQVLVYS persistent 525 yfcC YfcC family protein WP_048761880.1 UPI000661324B UniRef100_UPI000661324B,UniRef50_P44023,UniRef90_A0A3S7GZ69 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 19408 21606 . - . GCA_005502385.1_00131_gene GCA_005502385.1_00131 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSKQKFMIYLLTTTLVLPTFTSSVAQAEENTKETKTSESNNEDSTSTSETTHTESNETPSSEDSTSDSSDNKKPDSQSKESQSDTVSNEDAASHSKPSSTHSKNNRSSNTKDEDTYHTPLSVFNMNDSNHSFSSNFLDPSHFENGFSLTSLISSLFHFDDDISKYEHVESDSSSSNTNDDKNATNTTSSDEDRTESSQQHTTIDASPQDSSDKSNSHTTSSNQSDVLTENNQSDQPSESSFKYSNSNNNHSTDDSSVSKALDSLNQLASDLNDSNNNESSTSESSNQSASQQTTNNTTSQTAQEDQATSNKDRQQSEDVLDALLDKYSDKAQQTHEDYTSSKKDSTSQASQNEDSKKDTSTTQDQLDTNKDNPQLPTEKQLKHKQEAPQSFENDFKQSNTRAISLFQDVPQLDGNNVTNGKMAVVENKATREFITSIAKDAHKIGQDNDIYASVMIAQAILESSSGNSALAQAPNYNLFGMKGSYKGASVNFNTLEASSDNHIFSINASFRKYPNLKASLKDYADLIKHGIDGNPTIYKSSWKNIAPSYRSATRHLSQTYATDPNYATKLNSLIEHYNLTDFDKKHMPDLDKYSKSTGSSGTDVSGSAFKPFSISDVASPYPYGQCTWYVYERVQQFDKHVGGHWGDAHNWDNSAEDAGYSVSTTPKNHTAVVFEAGQSGASGLYGHVAFVEKVNDDGSIIISESNVKGLGIVSYRQIDADTASSLHYIQPK . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 19408 21606 . - . GCA_005502385.1_00131_mRNA GCA_005502385.1_00131 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSKQKFMIYLLTTTLVLPTFTSSVAQAEENTKETKTSESNNEDSTSTSETTHTESNETPSSEDSTSDSSDNKKPDSQSKESQSDTVSNEDAASHSKPSSTHSKNNRSSNTKDEDTYHTPLSVFNMNDSNHSFSSNFLDPSHFENGFSLTSLISSLFHFDDDISKYEHVESDSSSSNTNDDKNATNTTSSDEDRTESSQQHTTIDASPQDSSDKSNSHTTSSNQSDVLTENNQSDQPSESSFKYSNSNNNHSTDDSSVSKALDSLNQLASDLNDSNNNESSTSESSNQSASQQTTNNTTSQTAQEDQATSNKDRQQSEDVLDALLDKYSDKAQQTHEDYTSSKKDSTSQASQNEDSKKDTSTTQDQLDTNKDNPQLPTEKQLKHKQEAPQSFENDFKQSNTRAISLFQDVPQLDGNNVTNGKMAVVENKATREFITSIAKDAHKIGQDNDIYASVMIAQAILESSSGNSALAQAPNYNLFGMKGSYKGASVNFNTLEASSDNHIFSINASFRKYPNLKASLKDYADLIKHGIDGNPTIYKSSWKNIAPSYRSATRHLSQTYATDPNYATKLNSLIEHYNLTDFDKKHMPDLDKYSKSTGSSGTDVSGSAFKPFSISDVASPYPYGQCTWYVYERVQQFDKHVGGHWGDAHNWDNSAEDAGYSVSTTPKNHTAVVFEAGQSGASGLYGHVAFVEKVNDDGSIIISESNVKGLGIVSYRQIDADTASSLHYIQPK . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 19408 21606 . - 0 GCA_005502385.1_00131 GCA_005502385.1_00131_gene,GCA_005502385.1_00131_mRNA GCA_005502385.1_00131 N-acetylmuramoyl-L-alanine amidase domain-containing protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSKQKFMIYLLTTTLVLPTFTSSVAQAEENTKETKTSESNNEDSTSTSETTHTESNETPSSEDSTSDSSDNKKPDSQSKESQSDTVSNEDAASHSKPSSTHSKNNRSSNTKDEDTYHTPLSVFNMNDSNHSFSSNFLDPSHFENGFSLTSLISSLFHFDDDISKYEHVESDSSSSNTNDDKNATNTTSSDEDRTESSQQHTTIDASPQDSSDKSNSHTTSSNQSDVLTENNQSDQPSESSFKYSNSNNNHSTDDSSVSKALDSLNQLASDLNDSNNNESSTSESSNQSASQQTTNNTTSQTAQEDQATSNKDRQQSEDVLDALLDKYSDKAQQTHEDYTSSKKDSTSQASQNEDSKKDTSTTQDQLDTNKDNPQLPTEKQLKHKQEAPQSFENDFKQSNTRAISLFQDVPQLDGNNVTNGKMAVVENKATREFITSIAKDAHKIGQDNDIYASVMIAQAILESSSGNSALAQAPNYNLFGMKGSYKGASVNFNTLEASSDNHIFSINASFRKYPNLKASLKDYADLIKHGIDGNPTIYKSSWKNIAPSYRSATRHLSQTYATDPNYATKLNSLIEHYNLTDFDKKHMPDLDKYSKSTGSSGTDVSGSAFKPFSISDVASPYPYGQCTWYVYERVQQFDKHVGGHWGDAHNWDNSAEDAGYSVSTTPKNHTAVVFEAGQSGASGLYGHVAFVEKVNDDGSIIISESNVKGLGIVSYRQIDADTASSLHYIQPK persistent 732 amidase domain-containing protein WP_049420778.1 UPI00066E0579 UniRef100_UPI00066E0579,UniRef50_Q2G222,UniRef90_A0A3S7GVH1 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 21871 24699 . + . GCA_005502385.1_00132_gene GCA_005502385.1_00132 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKNAFKLFLTDLKRVAKTPAAWVILGGLAILPSFYAWFNLWAMWDPYSNTGHIKVAVVNEDQGDKIRGKKINVGNTLEDTLKNNDKFDWQFVSREKADHEIRMGKYYAGIYIPKKFTHQITGTLRKHPEKADITYKVNQKINAVAPKMTDTGSTIIVDEANKQFNTTVTKALLKAANKVGLQIEDEVPTIDKIKNAVYTAHQSLPKLNKIADRIVYLNDHQDQLDQYANQFRDLDTYKDDILNAQQKLNDVNAAIPSLNQKAKLILALNEYMPNIQKLVNVAADDIPQTFPKINRGVEIASQGLDLANQQLNDAQGYLGMAKQRVGDYQEATRRAQAVNGNVNNNLRQQSATTNDNGMPQYTIQKLSNSSNNDQLPNGQILSNEDVKSMNSGLAEALLALSSNADKQAKASQSDVKALRDITYGVIASNRPTEYNDMLRNIKGRLENTSKYNQQLIDVLKELQQREHVNLAPQIKRIESTNNRINDTLRSTNQLIDALSSGGKGSAESINVLRSLPALNSGLGSYRDYIKNNLNNRLLVVSNDITKQLSEGQVVLSDVQSKLNTINQVIQAGQHIVGDGQTRIATLQSELPSLEAGYIEATQTAKNYFPTVRKNVAKAANFVRNDLPDLEQRLANATATVNANLPTLFDKYDNAVDLLDENQPKAKEALANLANFAQTKLPGIERDLNKANDIFNQLDDDDAVDKLVNSLKNDLKKQADVIANPINKKTVDVFPVRDYGSGMTPFYTALSIWVGALLLVSLLTVHNKHEELADQLTKRQEYLGKGMFFITMGILQTLIVTTGDLFLLHAQVESPLLFVLVALFGAIVFNTIVYTCVSILGNPGKAVAIILLVLQIAGGGGTFPVVTLPKFFQNISPYLPFTYLIDCLREVVGGIVPEILITKLIIFGLFGLGFFLIGFIAKPFLDPIMTKIAKRVEESKVTE . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 21871 24699 . + . GCA_005502385.1_00132_mRNA GCA_005502385.1_00132 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKNAFKLFLTDLKRVAKTPAAWVILGGLAILPSFYAWFNLWAMWDPYSNTGHIKVAVVNEDQGDKIRGKKINVGNTLEDTLKNNDKFDWQFVSREKADHEIRMGKYYAGIYIPKKFTHQITGTLRKHPEKADITYKVNQKINAVAPKMTDTGSTIIVDEANKQFNTTVTKALLKAANKVGLQIEDEVPTIDKIKNAVYTAHQSLPKLNKIADRIVYLNDHQDQLDQYANQFRDLDTYKDDILNAQQKLNDVNAAIPSLNQKAKLILALNEYMPNIQKLVNVAADDIPQTFPKINRGVEIASQGLDLANQQLNDAQGYLGMAKQRVGDYQEATRRAQAVNGNVNNNLRQQSATTNDNGMPQYTIQKLSNSSNNDQLPNGQILSNEDVKSMNSGLAEALLALSSNADKQAKASQSDVKALRDITYGVIASNRPTEYNDMLRNIKGRLENTSKYNQQLIDVLKELQQREHVNLAPQIKRIESTNNRINDTLRSTNQLIDALSSGGKGSAESINVLRSLPALNSGLGSYRDYIKNNLNNRLLVVSNDITKQLSEGQVVLSDVQSKLNTINQVIQAGQHIVGDGQTRIATLQSELPSLEAGYIEATQTAKNYFPTVRKNVAKAANFVRNDLPDLEQRLANATATVNANLPTLFDKYDNAVDLLDENQPKAKEALANLANFAQTKLPGIERDLNKANDIFNQLDDDDAVDKLVNSLKNDLKKQADVIANPINKKTVDVFPVRDYGSGMTPFYTALSIWVGALLLVSLLTVHNKHEELADQLTKRQEYLGKGMFFITMGILQTLIVTTGDLFLLHAQVESPLLFVLVALFGAIVFNTIVYTCVSILGNPGKAVAIILLVLQIAGGGGTFPVVTLPKFFQNISPYLPFTYLIDCLREVVGGIVPEILITKLIIFGLFGLGFFLIGFIAKPFLDPIMTKIAKRVEESKVTE . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 21871 24699 . + 0 GCA_005502385.1_00132 GCA_005502385.1_00132_gene,GCA_005502385.1_00132_mRNA GCA_005502385.1_00132 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKNAFKLFLTDLKRVAKTPAAWVILGGLAILPSFYAWFNLWAMWDPYSNTGHIKVAVVNEDQGDKIRGKKINVGNTLEDTLKNNDKFDWQFVSREKADHEIRMGKYYAGIYIPKKFTHQITGTLRKHPEKADITYKVNQKINAVAPKMTDTGSTIIVDEANKQFNTTVTKALLKAANKVGLQIEDEVPTIDKIKNAVYTAHQSLPKLNKIADRIVYLNDHQDQLDQYANQFRDLDTYKDDILNAQQKLNDVNAAIPSLNQKAKLILALNEYMPNIQKLVNVAADDIPQTFPKINRGVEIASQGLDLANQQLNDAQGYLGMAKQRVGDYQEATRRAQAVNGNVNNNLRQQSATTNDNGMPQYTIQKLSNSSNNDQLPNGQILSNEDVKSMNSGLAEALLALSSNADKQAKASQSDVKALRDITYGVIASNRPTEYNDMLRNIKGRLENTSKYNQQLIDVLKELQQREHVNLAPQIKRIESTNNRINDTLRSTNQLIDALSSGGKGSAESINVLRSLPALNSGLGSYRDYIKNNLNNRLLVVSNDITKQLSEGQVVLSDVQSKLNTINQVIQAGQHIVGDGQTRIATLQSELPSLEAGYIEATQTAKNYFPTVRKNVAKAANFVRNDLPDLEQRLANATATVNANLPTLFDKYDNAVDLLDENQPKAKEALANLANFAQTKLPGIERDLNKANDIFNQLDDDDAVDKLVNSLKNDLKKQADVIANPINKKTVDVFPVRDYGSGMTPFYTALSIWVGALLLVSLLTVHNKHEELADQLTKRQEYLGKGMFFITMGILQTLIVTTGDLFLLHAQVESPLLFVLVALFGAIVFNTIVYTCVSILGNPGKAVAIILLVLQIAGGGGTFPVVTLPKFFQNISPYLPFTYLIDCLREVVGGIVPEILITKLIIFGLFGLGFFLIGFIAKPFLDPIMTKIAKRVEESKVTE persistent 942 YhgE/Pip domain-containing protein WP_049420779.1 UPI00066BB43A UniRef100_UPI00066BB43A,UniRef50_Q49UI0,UniRef90_A0A6N0I299 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 24755 25255 . - . GCA_005502385.1_00133_gene GCA_005502385.1_00133 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKILATIVIILLVVALGFSVFFAATHSNQSDPNQTQSTKKKDKKETTSESHTVQSNETSQSDNGTTAQSESTSQSIQEQQQTTQRPSTVQTTQPKTSESSNTSQHRSESNTSKQPTSQSTEDKPSSEQTSTEQPSTEEKPSSQQSTQSSTESHTHRSSESNNKSN . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 24755 25255 . - . GCA_005502385.1_00133_mRNA GCA_005502385.1_00133 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKILATIVIILLVVALGFSVFFAATHSNQSDPNQTQSTKKKDKKETTSESHTVQSNETSQSDNGTTAQSESTSQSIQEQQQTTQRPSTVQTTQPKTSESSNTSQHRSESNTSKQPTSQSTEDKPSSEQTSTEQPSTEEKPSSQQSTQSSTESHTHRSSESNNKSN . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 24755 25255 . - 0 GCA_005502385.1_00133 GCA_005502385.1_00133_gene,GCA_005502385.1_00133_mRNA GCA_005502385.1_00133 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKILATIVIILLVVALGFSVFFAATHSNQSDPNQTQSTKKKDKKETTSESHTVQSNETSQSDNGTTAQSESTSQSIQEQQQTTQRPSTVQTTQPKTSESSNTSQHRSESNTSKQPTSQSTEDKPSSEQTSTEQPSTEEKPSSQQSTQSSTESHTHRSSESNNKSN persistent 166 DUF4887 domain-containing protein WP_049419660.1 UPI00066A1DAF UniRef100_UPI00066A1DAF,UniRef50_A0A6N0I2G7,UniRef90_A0A6N0I2G7 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 25458 25979 . + . GCA_005502385.1_00134_gene GCA_005502385.1_00134 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNKIVKSIASVTLAFGTVLGVSTTVLPIEDTAHAATKPYYVYNGYVDKDAKFVTNKQFIKAVKYGNVTMNGIKFEKAHSNKELEKYNQTFTGVSKDGKKANKVQFSVKGDLTYNQLKKAYGSDFKKVKGTPSDKKSGIFEYQPKKDGLIVSFVITHGRTVEVNIGYEGVTTSK . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 25458 25979 . + . GCA_005502385.1_00134_mRNA GCA_005502385.1_00134 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNKIVKSIASVTLAFGTVLGVSTTVLPIEDTAHAATKPYYVYNGYVDKDAKFVTNKQFIKAVKYGNVTMNGIKFEKAHSNKELEKYNQTFTGVSKDGKKANKVQFSVKGDLTYNQLKKAYGSDFKKVKGTPSDKKSGIFEYQPKKDGLIVSFVITHGRTVEVNIGYEGVTTSK . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 25458 25979 . + 0 GCA_005502385.1_00134 GCA_005502385.1_00134_gene,GCA_005502385.1_00134_mRNA GCA_005502385.1_00134 Immunodominant staphylococcal antigen B GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNKIVKSIASVTLAFGTVLGVSTTVLPIEDTAHAATKPYYVYNGYVDKDAKFVTNKQFIKAVKYGNVTMNGIKFEKAHSNKELEKYNQTFTGVSKDGKKANKVQFSVKGDLTYNQLKKAYGSDFKKVKGTPSDKKSGIFEYQPKKDGLIVSFVITHGRTVEVNIGYEGVTTSK persistent 173 isaB immunodominant staphylococcal antigen IsaB family protein WP_049420780.1 UPI00066AA14B UniRef100_UPI00066AA14B,UniRef50_A0A1J3ZVL8,UniRef90_A0A657M669 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 26025 26423 . - . GCA_005502385.1_00135_gene GCA_005502385.1_00135 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MIPDQYKHETDYRNIPREYLDANIPQGRGMIKWAPFAVMPEQYERINAFIENQNKITMPSLSDDQFNILNRRLIEKYTTHQLAMISYFRNGTIHSIAAYIKRIDTLKRYITISNENGSQTMQLKFAVLCHIE . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 26025 26423 . - . GCA_005502385.1_00135_mRNA GCA_005502385.1_00135 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MIPDQYKHETDYRNIPREYLDANIPQGRGMIKWAPFAVMPEQYERINAFIENQNKITMPSLSDDQFNILNRRLIEKYTTHQLAMISYFRNGTIHSIAAYIKRIDTLKRYITISNENGSQTMQLKFAVLCHIE . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 26025 26423 . - 0 GCA_005502385.1_00135 GCA_005502385.1_00135_gene,GCA_005502385.1_00135_mRNA GCA_005502385.1_00135 hypothetical protein """""" GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MIPDQYKHETDYRNIPREYLDANIPQGRGMIKWAPFAVMPEQYERINAFIENQNKITMPSLSDDQFNILNRRLIEKYTTHQLAMISYFRNGTIHSIAAYIKRIDTLKRYITISNENGSQTMQLKFAVLCHIE persistent 132 YolD-like family protein WP_048761868.1 UPI0006601E86 UniRef100_UPI0006601E86,UniRef50_A0AAE5JKP9,UniRef90_A0AAE5JKP9 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 26754 27278 . + . GCA_005502385.1_00136_gene GCA_005502385.1_00136 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKITKVCVATTIAFSTLLDASVTDALVQQPTAHAATSSYYNYDGYAGQNASFVLDKHFKNAIKAENVKFNGIKIKSTTSNKSVLKYDQYFRNVSKDGKTASLLDMEVKGQLSLTQLKKVYSKELQKIDNGNNNTTGIYYYQPKQNGMTVWFDVNKGKVDRVVLGYSTVQQAMN . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 26754 27278 . + . GCA_005502385.1_00136_mRNA GCA_005502385.1_00136 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKITKVCVATTIAFSTLLDASVTDALVQQPTAHAATSSYYNYDGYAGQNASFVLDKHFKNAIKAENVKFNGIKIKSTTSNKSVLKYDQYFRNVSKDGKTASLLDMEVKGQLSLTQLKKVYSKELQKIDNGNNNTTGIYYYQPKQNGMTVWFDVNKGKVDRVVLGYSTVQQAMN . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 26754 27278 . + 0 GCA_005502385.1_00136 GCA_005502385.1_00136_gene,GCA_005502385.1_00136_mRNA GCA_005502385.1_00136 Immunodominant staphylococcal antigen B GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKITKVCVATTIAFSTLLDASVTDALVQQPTAHAATSSYYNYDGYAGQNASFVLDKHFKNAIKAENVKFNGIKIKSTTSNKSVLKYDQYFRNVSKDGKTASLLDMEVKGQLSLTQLKKVYSKELQKIDNGNNNTTGIYYYQPKQNGMTVWFDVNKGKVDRVVLGYSTVQQAMN persistent 174 isaB immunodominant staphylococcal antigen IsaB family protein WP_048761864.1 UPI0006610D3C UniRef100_UPI0006610D3C,UniRef50_A0A2A1K4P0,UniRef90_A0A3S7GVT3 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 27531 28766 . + . GCA_005502385.1_00137_gene GCA_005502385.1_00137 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTKGPIQVNNEIGTLKTVLLKRPGKELENLVPDHLSGLLFDDIPYLKVAQEEHDQFAETLRNEGVEVVYLEQLAAEAIENEDVRQQLIDDILSESQKTILGHEKEIKDYFSKLSNQALIEKVMAGIRKEEIQLETTHLVEYLDDRYPFYLDPMPNLYFTRDPQASIGRGMSINRMYWRARRRESIFMTYILKYHPRFKDADIPVWLDRTSPFNIEGGDELVLSKDVLAIGISERTSAEAIERLARNIFKDDYTTFKKVLAIEIPNSRTFMHLDTVFTMIDYDKFTVHAAIFKEENHMNIFTIEQDEMKDDIKITHSRQLRETLANALGVDDVEFIPTGNGDVIDGAREQWNDGSNTLCIRPGVVVTYDRNYVSNQLLRDKGIKVIEIKGSELVRGRGGPRCMSQPLFREDI . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 27531 28766 . + . GCA_005502385.1_00137_mRNA GCA_005502385.1_00137 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTKGPIQVNNEIGTLKTVLLKRPGKELENLVPDHLSGLLFDDIPYLKVAQEEHDQFAETLRNEGVEVVYLEQLAAEAIENEDVRQQLIDDILSESQKTILGHEKEIKDYFSKLSNQALIEKVMAGIRKEEIQLETTHLVEYLDDRYPFYLDPMPNLYFTRDPQASIGRGMSINRMYWRARRRESIFMTYILKYHPRFKDADIPVWLDRTSPFNIEGGDELVLSKDVLAIGISERTSAEAIERLARNIFKDDYTTFKKVLAIEIPNSRTFMHLDTVFTMIDYDKFTVHAAIFKEENHMNIFTIEQDEMKDDIKITHSRQLRETLANALGVDDVEFIPTGNGDVIDGAREQWNDGSNTLCIRPGVVVTYDRNYVSNQLLRDKGIKVIEIKGSELVRGRGGPRCMSQPLFREDI . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 27531 28766 . + 0 GCA_005502385.1_00137 GCA_005502385.1_00137_gene,GCA_005502385.1_00137_mRNA GCA_005502385.1_00137 Arginine deiminase GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTKGPIQVNNEIGTLKTVLLKRPGKELENLVPDHLSGLLFDDIPYLKVAQEEHDQFAETLRNEGVEVVYLEQLAAEAIENEDVRQQLIDDILSESQKTILGHEKEIKDYFSKLSNQALIEKVMAGIRKEEIQLETTHLVEYLDDRYPFYLDPMPNLYFTRDPQASIGRGMSINRMYWRARRRESIFMTYILKYHPRFKDADIPVWLDRTSPFNIEGGDELVLSKDVLAIGISERTSAEAIERLARNIFKDDYTTFKKVLAIEIPNSRTFMHLDTVFTMIDYDKFTVHAAIFKEENHMNIFTIEQDEMKDDIKITHSRQLRETLANALGVDDVEFIPTGNGDVIDGAREQWNDGSNTLCIRPGVVVTYDRNYVSNQLLRDKGIKVIEIKGSELVRGRGGPRCMSQPLFREDI persistent 411 arcA arginine deiminase 3.5.3.6 GO:0016990,GO:0019546 UniRef50_O86131,UniRef90_A0A6N0I2C3 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 28903 29664 . + . GCA_005502385.1_00138_gene GCA_005502385.1_00138 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MAFMTINYKSPTIGMNQSFTAIVPEDDSFFKQHEPVKPLKMLLLLHGLSSDATSYMRFTSIERYAEAHQLAVIMPNADHSGYANMAFGHSYYDYILEIYNYAHQVLPVSKKREDNFIAGHSMGGYGTIKFALTQSHLFSKAAPLSAVCDVQSLLDIEWNDFDPKAIAGEALKVKGTELDTYHLVDEAVDKGATLPELFIQCGTEDFLYDDNQRFMKYLDEKGINYKYEEGPGEHDYAFWDKAIERTIEWLVEK . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 28903 29664 . + . GCA_005502385.1_00138_mRNA GCA_005502385.1_00138 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MAFMTINYKSPTIGMNQSFTAIVPEDDSFFKQHEPVKPLKMLLLLHGLSSDATSYMRFTSIERYAEAHQLAVIMPNADHSGYANMAFGHSYYDYILEIYNYAHQVLPVSKKREDNFIAGHSMGGYGTIKFALTQSHLFSKAAPLSAVCDVQSLLDIEWNDFDPKAIAGEALKVKGTELDTYHLVDEAVDKGATLPELFIQCGTEDFLYDDNQRFMKYLDEKGINYKYEEGPGEHDYAFWDKAIERTIEWLVEK . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 28903 29664 . + 0 GCA_005502385.1_00138 GCA_005502385.1_00138_gene,GCA_005502385.1_00138_mRNA GCA_005502385.1_00138 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MAFMTINYKSPTIGMNQSFTAIVPEDDSFFKQHEPVKPLKMLLLLHGLSSDATSYMRFTSIERYAEAHQLAVIMPNADHSGYANMAFGHSYYDYILEIYNYAHQVLPVSKKREDNFIAGHSMGGYGTIKFALTQSHLFSKAAPLSAVCDVQSLLDIEWNDFDPKAIAGEALKVKGTELDTYHLVDEAVDKGATLPELFIQCGTEDFLYDDNQRFMKYLDEKGINYKYEEGPGEHDYAFWDKAIERTIEWLVEK persistent 253 Esterase family protein WP_049379403.1 UPI00066D94B6 UniRef100_UPI00066D94B6,UniRef50_Q2FUY3,UniRef90_A0A3S7GVW9 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 30088 31230 . + . GCA_005502385.1_00139_gene GCA_005502385.1_00139 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MYRYYITSVVIFLVFSLICGMALVEDNSTKVSVVAVGDNLIHPVVYHDAQHSDGTFNFKPMYSNIKKDIASPDLAFVNQESPLGGDDIPYSGFKRFNTPSQVASDIVATGFDVINGANNHSLDQGDQGVTNHIQTWEKFDHNVLFTGIYNSKKEANRVHTISKNGVKISVLSYTYGTNDMVSNYPYTVKTFDEATIKRDIRKAKQQSDVVMVSAHWGNENHHTPNKTQKKYAQLFANEGVDVVIGTHPHVIQPVKWVKAKNHHHKTLVAYSLGNFLNGQYSGDENNQLLGRINFDVVKEPKGVHLENVKWTSMVNHYEQARPTNKQTRQHFKIYNLDDYTPQLAQKHGLQYDSDSEWNIKHLQDITKDVIDRTFLNERSL . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 30088 31230 . + . GCA_005502385.1_00139_mRNA GCA_005502385.1_00139 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MYRYYITSVVIFLVFSLICGMALVEDNSTKVSVVAVGDNLIHPVVYHDAQHSDGTFNFKPMYSNIKKDIASPDLAFVNQESPLGGDDIPYSGFKRFNTPSQVASDIVATGFDVINGANNHSLDQGDQGVTNHIQTWEKFDHNVLFTGIYNSKKEANRVHTISKNGVKISVLSYTYGTNDMVSNYPYTVKTFDEATIKRDIRKAKQQSDVVMVSAHWGNENHHTPNKTQKKYAQLFANEGVDVVIGTHPHVIQPVKWVKAKNHHHKTLVAYSLGNFLNGQYSGDENNQLLGRINFDVVKEPKGVHLENVKWTSMVNHYEQARPTNKQTRQHFKIYNLDDYTPQLAQKHGLQYDSDSEWNIKHLQDITKDVIDRTFLNERSL . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 30088 31230 . + 0 GCA_005502385.1_00139 GCA_005502385.1_00139_gene,GCA_005502385.1_00139_mRNA GCA_005502385.1_00139 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MYRYYITSVVIFLVFSLICGMALVEDNSTKVSVVAVGDNLIHPVVYHDAQHSDGTFNFKPMYSNIKKDIASPDLAFVNQESPLGGDDIPYSGFKRFNTPSQVASDIVATGFDVINGANNHSLDQGDQGVTNHIQTWEKFDHNVLFTGIYNSKKEANRVHTISKNGVKISVLSYTYGTNDMVSNYPYTVKTFDEATIKRDIRKAKQQSDVVMVSAHWGNENHHTPNKTQKKYAQLFANEGVDVVIGTHPHVIQPVKWVKAKNHHHKTLVAYSLGNFLNGQYSGDENNQLLGRINFDVVKEPKGVHLENVKWTSMVNHYEQARPTNKQTRQHFKIYNLDDYTPQLAQKHGLQYDSDSEWNIKHLQDITKDVIDRTFLNERSL persistent 380 capA Capsule biosynthesis protein CapA UniRef50_Q4L9J1,UniRef90_A0AAE5JKZ8 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 31309 32949 . - . GCA_005502385.1_00140_gene GCA_005502385.1_00140 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKQRVGQYLMDAVHEAGVNKIFGVPGDFNLAFLDDIVSHEGVEWVGTTNELNGAYTADGYARMNGLGVLVTTFGVGELSAVNGIAGSYAERVPVIAITGAPTRAVEKAGKYVHHSLGEGRFDSYRHMFEPITTAQAYITPENATTEIPRVINAALQERRPVHIHLPIDVAMSDIEVEQPFKVKKAPQQDVTQYVDMVADKLRSAQQPLIIAGHEINSFHLHDELEEFVNKTNIPVVQLSLGKGAFNEENPHYMGIYDGEIAKDDIKDYVNHSDAILNIGAKLTDSATAGFSYQFDINDVVMINHRLFKLNDTSDTEIALPEFLEALSTIDYTNKHSFPSYQQPKSGDYELTDDTLTQDIYFKMMQDFIGGNDVLIAEQGSSFFGAYSLALPKNMSFIGQPLWGSIGYTLPATLGSQLANPHCRHILLIGDGSFQLTVQELSTMIRQDIKPVMFLINNDGYTVERLIHGMEEPYNDINMWDYKALPNVFGGDSVKVHDVKTSKDLKAVFDEINEDQEHMHFTEVTMKWDDAPQTLRDISKAFANQNK . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 31309 32949 . - . GCA_005502385.1_00140_mRNA GCA_005502385.1_00140 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKQRVGQYLMDAVHEAGVNKIFGVPGDFNLAFLDDIVSHEGVEWVGTTNELNGAYTADGYARMNGLGVLVTTFGVGELSAVNGIAGSYAERVPVIAITGAPTRAVEKAGKYVHHSLGEGRFDSYRHMFEPITTAQAYITPENATTEIPRVINAALQERRPVHIHLPIDVAMSDIEVEQPFKVKKAPQQDVTQYVDMVADKLRSAQQPLIIAGHEINSFHLHDELEEFVNKTNIPVVQLSLGKGAFNEENPHYMGIYDGEIAKDDIKDYVNHSDAILNIGAKLTDSATAGFSYQFDINDVVMINHRLFKLNDTSDTEIALPEFLEALSTIDYTNKHSFPSYQQPKSGDYELTDDTLTQDIYFKMMQDFIGGNDVLIAEQGSSFFGAYSLALPKNMSFIGQPLWGSIGYTLPATLGSQLANPHCRHILLIGDGSFQLTVQELSTMIRQDIKPVMFLINNDGYTVERLIHGMEEPYNDINMWDYKALPNVFGGDSVKVHDVKTSKDLKAVFDEINEDQEHMHFTEVTMKWDDAPQTLRDISKAFANQNK . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 31309 32949 . - 0 GCA_005502385.1_00140 GCA_005502385.1_00140_gene,GCA_005502385.1_00140_mRNA GCA_005502385.1_00140 Indole-3-pyruvate decarboxylase GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKQRVGQYLMDAVHEAGVNKIFGVPGDFNLAFLDDIVSHEGVEWVGTTNELNGAYTADGYARMNGLGVLVTTFGVGELSAVNGIAGSYAERVPVIAITGAPTRAVEKAGKYVHHSLGEGRFDSYRHMFEPITTAQAYITPENATTEIPRVINAALQERRPVHIHLPIDVAMSDIEVEQPFKVKKAPQQDVTQYVDMVADKLRSAQQPLIIAGHEINSFHLHDELEEFVNKTNIPVVQLSLGKGAFNEENPHYMGIYDGEIAKDDIKDYVNHSDAILNIGAKLTDSATAGFSYQFDINDVVMINHRLFKLNDTSDTEIALPEFLEALSTIDYTNKHSFPSYQQPKSGDYELTDDTLTQDIYFKMMQDFIGGNDVLIAEQGSSFFGAYSLALPKNMSFIGQPLWGSIGYTLPATLGSQLANPHCRHILLIGDGSFQLTVQELSTMIRQDIKPVMFLINNDGYTVERLIHGMEEPYNDINMWDYKALPNVFGGDSVKVHDVKTSKDLKAVFDEINEDQEHMHFTEVTMKWDDAPQTLRDISKAFANQNK persistent 546 Alpha-keto acid decarboxylase family protein 4.1.1.72 UniRef50_A0A239YDI9,UniRef90_A0A3S7GV94 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 33097 33552 . + . GCA_005502385.1_00141_gene GCA_005502385.1_00141 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MDQNKNDYEHMLFYFAYKTFVTTADEIIEKYGMSRQHHRFLFFINKLPGITIKQLLNTLEISKQGSHATLKKLKEEGLIIEQQSEEDRRVKQLFPTPKGSKLVEKLNKAQDKLMQQTFQKVGKDWYAIMEELSNYREGFQDIKHLKDEKES . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 33097 33552 . + . GCA_005502385.1_00141_mRNA GCA_005502385.1_00141 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MDQNKNDYEHMLFYFAYKTFVTTADEIIEKYGMSRQHHRFLFFINKLPGITIKQLLNTLEISKQGSHATLKKLKEEGLIIEQQSEEDRRVKQLFPTPKGSKLVEKLNKAQDKLMQQTFQKVGKDWYAIMEELSNYREGFQDIKHLKDEKES . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 33097 33552 . + 0 GCA_005502385.1_00141 GCA_005502385.1_00141_gene,GCA_005502385.1_00141_mRNA GCA_005502385.1_00141 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MDQNKNDYEHMLFYFAYKTFVTTADEIIEKYGMSRQHHRFLFFINKLPGITIKQLLNTLEISKQGSHATLKKLKEEGLIIEQQSEEDRRVKQLFPTPKGSKLVEKLNKAQDKLMQQTFQKVGKDWYAIMEELSNYREGFQDIKHLKDEKES persistent 151 marR MarR family transcriptional regulator WP_137689725.1 UPI0010FA31D0 UniRef100_UPI0010FA31D0,UniRef50_Q2FUY4,UniRef90_A0A974KWL3 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 34844 34945 . + . GCA_005502385.1_00142_gene GCA_005502385.1_00142 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKLLVTTIIGFVGYIAFKKYQNKVNEMPNIEY . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 34844 34945 . + . GCA_005502385.1_00142_mRNA GCA_005502385.1_00142 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKLLVTTIIGFVGYIAFKKYQNKVNEMPNIEY . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 34844 34945 . + 0 GCA_005502385.1_00142 GCA_005502385.1_00142_gene,GCA_005502385.1_00142_mRNA GCA_005502385.1_00142 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKLLVTTIIGFVGYIAFKKYQNKVNEMPNIEY persistent 33 SE2200 family small protein WP_017175470.1 UPI00036AE34D UniRef100_A0A2A1M9I2,UniRef50_A0A1Q1G133,UniRef90_A0A2A1M9I2 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 35296 36771 . - . GCA_005502385.1_00143_gene GCA_005502385.1_00143 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSFINKFGKTTVATSILAASVLGTTHVSFASGAGQGSQDQQGQNGDYMAIGNTKNPKNVIFMVGDGMGPSYNSAYRYYADNPNTKELDQTAFDKYLKGTNRTNPNDPKENVTDSAAGGTAFATGHKTYNGSISVDNDKKPLKSVLEYAKEQGKSTGLVTTAEVTDATPAVYAAHVDDRDKKDDIAQQFYNDKINGQHKVDVILGGGSKYFGKENGHLTEKFQKDGYDYVTNKTDLANSKSDQVLGLFAEKNMPLQIDAPQQNPLLADMEESALSKLEKNDKGFFLMVEGASIDKSGHPNDITGVMSEMSGFDKAFQNAIDYAKNHKDTLVVATADHSTGGLSIAKGKDYVWNPDAIHKMKHSGSYMTEQIAKGKDPETVINEGYGVDFPKKQLDKVKDAAKELKDVKDKAKNDDDPKIAEATTQLQDAIQKPINDESHTGWTTYGHTGEDVNTYAYGPGADKFRGNIDNTDSAKNIFDFFGQDVTSNQNQQ . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 35296 36771 . - . GCA_005502385.1_00143_mRNA GCA_005502385.1_00143 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSFINKFGKTTVATSILAASVLGTTHVSFASGAGQGSQDQQGQNGDYMAIGNTKNPKNVIFMVGDGMGPSYNSAYRYYADNPNTKELDQTAFDKYLKGTNRTNPNDPKENVTDSAAGGTAFATGHKTYNGSISVDNDKKPLKSVLEYAKEQGKSTGLVTTAEVTDATPAVYAAHVDDRDKKDDIAQQFYNDKINGQHKVDVILGGGSKYFGKENGHLTEKFQKDGYDYVTNKTDLANSKSDQVLGLFAEKNMPLQIDAPQQNPLLADMEESALSKLEKNDKGFFLMVEGASIDKSGHPNDITGVMSEMSGFDKAFQNAIDYAKNHKDTLVVATADHSTGGLSIAKGKDYVWNPDAIHKMKHSGSYMTEQIAKGKDPETVINEGYGVDFPKKQLDKVKDAAKELKDVKDKAKNDDDPKIAEATTQLQDAIQKPINDESHTGWTTYGHTGEDVNTYAYGPGADKFRGNIDNTDSAKNIFDFFGQDVTSNQNQQ . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 35296 36771 . - 0 GCA_005502385.1_00143 GCA_005502385.1_00143_gene,GCA_005502385.1_00143_mRNA GCA_005502385.1_00143 Alkaline phosphatase 3 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSFINKFGKTTVATSILAASVLGTTHVSFASGAGQGSQDQQGQNGDYMAIGNTKNPKNVIFMVGDGMGPSYNSAYRYYADNPNTKELDQTAFDKYLKGTNRTNPNDPKENVTDSAAGGTAFATGHKTYNGSISVDNDKKPLKSVLEYAKEQGKSTGLVTTAEVTDATPAVYAAHVDDRDKKDDIAQQFYNDKINGQHKVDVILGGGSKYFGKENGHLTEKFQKDGYDYVTNKTDLANSKSDQVLGLFAEKNMPLQIDAPQQNPLLADMEESALSKLEKNDKGFFLMVEGASIDKSGHPNDITGVMSEMSGFDKAFQNAIDYAKNHKDTLVVATADHSTGGLSIAKGKDYVWNPDAIHKMKHSGSYMTEQIAKGKDPETVINEGYGVDFPKKQLDKVKDAAKELKDVKDKAKNDDDPKIAEATTQLQDAIQKPINDESHTGWTTYGHTGEDVNTYAYGPGADKFRGNIDNTDSAKNIFDFFGQDVTSNQNQQ persistent 491 Alkaline phosphatase 3.1.3.1 UniRef50_A0A0U1MVV2,UniRef90_A0A3S7GVU0 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 35864 35967 . + . GCA_005502385.1_00144_gene GCA_005502385.1_00144 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 35864 35967 . + . GCA_005502385.1_00144_mRNA GCA_005502385.1_00144 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 . . . . . . . GCA_005502385.1|SCOV01000011.1 Infernal:001001 misc_RNA 35864 35967 91.7 + . GCA_005502385.1_00144 GCA_005502385.1_00144_gene,GCA_005502385.1_00144_mRNA GCA_005502385.1_00144 sau-13 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 36980 37081 . + . GCA_005502385.1_00145_gene GCA_005502385.1_00145 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 36980 37081 . + . GCA_005502385.1_00145_mRNA GCA_005502385.1_00145 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 . . . . . . . GCA_005502385.1|SCOV01000011.1 Infernal:001001 misc_RNA 36980 37081 79.0 + . GCA_005502385.1_00145 GCA_005502385.1_00145_gene,GCA_005502385.1_00145_mRNA GCA_005502385.1_00145 SAM GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 37153 37326 . + . GCA_005502385.1_00146_gene GCA_005502385.1_00146 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTTLQELFKELDDWEQHSPKSWAGSMRRTAKINDIKRQIKEAITIEDIRKYILNKED . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 37153 37326 . + . GCA_005502385.1_00146_mRNA GCA_005502385.1_00146 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTTLQELFKELDDWEQHSPKSWAGSMRRTAKINDIKRQIKEAITIEDIRKYILNKED . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 37153 37326 . + 0 GCA_005502385.1_00146 GCA_005502385.1_00146_gene,GCA_005502385.1_00146_mRNA GCA_005502385.1_00146 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTTLQELFKELDDWEQHSPKSWAGSMRRTAKINDIKRQIKEAITIEDIRKYILNKED persistent 57 hypothetical protein UniRef50_Q4L9G4,UniRef90_A0A8X8KII5 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 37495 37662 . + . GCA_005502385.1_00147_gene GCA_005502385.1_00147 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MIFVMLSPLLIVVFIALSIMEERKRKKKTKHKENKFEQEKNKMSNPNDNNDHDAK . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 37495 37662 . + . GCA_005502385.1_00147_mRNA GCA_005502385.1_00147 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MIFVMLSPLLIVVFIALSIMEERKRKKKTKHKENKFEQEKNKMSNPNDNNDHDAK . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 37495 37662 . + 0 GCA_005502385.1_00147 GCA_005502385.1_00147_gene,GCA_005502385.1_00147_mRNA GCA_005502385.1_00147 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MIFVMLSPLLIVVFIALSIMEERKRKKKTKHKENKFEQEKNKMSNPNDNNDHDAK persistent 55 hypothetical protein WP_002488268.1 UPI00024E1935 UniRef100_UPI00024E1935,UniRef50_A0A8X8GXE5,UniRef90_A0A8X8GXE5 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 37675 38340 . + . GCA_005502385.1_00148_gene GCA_005502385.1_00148 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKVLIVEDDVVIAESLGNELSHWNYEVSIAKQFDNILEEFKTAEPELVLLDINLPTFNGYHWCQEIRKVSNVPIIFISSRTDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLTVSNNEMTVKGCKLVVDEATLYYNNDSVQLSFTELQILNKLFQNEGKYVNRTAIIEKCWESENFIDDNTLAVNMTRLRKKLQSIGIVDFIETKKNVGYKV . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 37675 38340 . + . GCA_005502385.1_00148_mRNA GCA_005502385.1_00148 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKVLIVEDDVVIAESLGNELSHWNYEVSIAKQFDNILEEFKTAEPELVLLDINLPTFNGYHWCQEIRKVSNVPIIFISSRTDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLTVSNNEMTVKGCKLVVDEATLYYNNDSVQLSFTELQILNKLFQNEGKYVNRTAIIEKCWESENFIDDNTLAVNMTRLRKKLQSIGIVDFIETKKNVGYKV . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 37675 38340 . + 0 GCA_005502385.1_00148 GCA_005502385.1_00148_gene,GCA_005502385.1_00148_mRNA GCA_005502385.1_00148 Response regulator protein GraR GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKVLIVEDDVVIAESLGNELSHWNYEVSIAKQFDNILEEFKTAEPELVLLDINLPTFNGYHWCQEIRKVSNVPIIFISSRTDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLTVSNNEMTVKGCKLVVDEATLYYNNDSVQLSFTELQILNKLFQNEGKYVNRTAIIEKCWESENFIDDNTLAVNMTRLRKKLQSIGIVDFIETKKNVGYKV persistent 221 Response regulator transcription factor WP_002454771.1 UPI0001EF5143 UniRef100_A0A974KW72,UniRef50_A0A173YEE9,UniRef90_A0A6N0I2B9 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 38346 39242 . + . GCA_005502385.1_00149_gene GCA_005502385.1_00149 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MLKAFIKSIRHQIMIVALFLLLFLMIFFLFNLPFNAFFLGMAIILFIMIIFWLIQLSGFQEAVSLKEEVADLEDELQRVKNEQAAYQVNVENYFLTWVHQMKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNQETDMSFSKVTINDLVKPLIMKYSIQFIDQKTTIHYTRCEDEVLTDVQWCTIMIEQILNNALKYARGKDIWITFNNENHVLSIRDNGVGISKADLPKIFDKGYSGYNGRLHQHSSGIGLFIVKHISAHLHHKVEVSSTLHEGTTFDIHFPENN . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 38346 39242 . + . GCA_005502385.1_00149_mRNA GCA_005502385.1_00149 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MLKAFIKSIRHQIMIVALFLLLFLMIFFLFNLPFNAFFLGMAIILFIMIIFWLIQLSGFQEAVSLKEEVADLEDELQRVKNEQAAYQVNVENYFLTWVHQMKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNQETDMSFSKVTINDLVKPLIMKYSIQFIDQKTTIHYTRCEDEVLTDVQWCTIMIEQILNNALKYARGKDIWITFNNENHVLSIRDNGVGISKADLPKIFDKGYSGYNGRLHQHSSGIGLFIVKHISAHLHHKVEVSSTLHEGTTFDIHFPENN . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 38346 39242 . + 0 GCA_005502385.1_00149 GCA_005502385.1_00149_gene,GCA_005502385.1_00149_mRNA GCA_005502385.1_00149 Sensor histidine kinase GraS GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MLKAFIKSIRHQIMIVALFLLLFLMIFFLFNLPFNAFFLGMAIILFIMIIFWLIQLSGFQEAVSLKEEVADLEDELQRVKNEQAAYQVNVENYFLTWVHQMKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNQETDMSFSKVTINDLVKPLIMKYSIQFIDQKTTIHYTRCEDEVLTDVQWCTIMIEQILNNALKYARGKDIWITFNNENHVLSIRDNGVGISKADLPKIFDKGYSGYNGRLHQHSSGIGLFIVKHISAHLHHKVEVSSTLHEGTTFDIHFPENN persistent 298 histidine kinase 2.7.13.3 WP_002449490.1 UPI00019FC55C UniRef100_UPI00019FC55C,UniRef50_A0A389PV50,UniRef90_A0A3S7GVX9 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 39374 40123 . + . GCA_005502385.1_00150_gene GCA_005502385.1_00150 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MLLDVNNVKKIFGRGLNATTALNGMSFNVDRGEFVAIMGESGSGKSTLLNLIATYDKATEGTITIDAQNIRQLRNKEIAYFRRDHLGFVFQDFNILPTMTNKDNILMPLVLANRSHQTMRHRLYRLSYQLHIEPLLNKYPFEISGGEQQRVAICRALINEPDLLLADEPTGALDSKTSKTIMELFRDINKNEQTILMVTHSAVDASYAKRILFIKDGRLYHEIYRGEELQSEFQKRIANSLAMLHESGD . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 39374 40123 . + . GCA_005502385.1_00150_mRNA GCA_005502385.1_00150 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MLLDVNNVKKIFGRGLNATTALNGMSFNVDRGEFVAIMGESGSGKSTLLNLIATYDKATEGTITIDAQNIRQLRNKEIAYFRRDHLGFVFQDFNILPTMTNKDNILMPLVLANRSHQTMRHRLYRLSYQLHIEPLLNKYPFEISGGEQQRVAICRALINEPDLLLADEPTGALDSKTSKTIMELFRDINKNEQTILMVTHSAVDASYAKRILFIKDGRLYHEIYRGEELQSEFQKRIANSLAMLHESGD . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 39374 40123 . + 0 GCA_005502385.1_00150 GCA_005502385.1_00150_gene,GCA_005502385.1_00150_mRNA GCA_005502385.1_00150 ABC transporter ATP-binding protein YxdL GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MLLDVNNVKKIFGRGLNATTALNGMSFNVDRGEFVAIMGESGSGKSTLLNLIATYDKATEGTITIDAQNIRQLRNKEIAYFRRDHLGFVFQDFNILPTMTNKDNILMPLVLANRSHQTMRHRLYRLSYQLHIEPLLNKYPFEISGGEQQRVAICRALINEPDLLLADEPTGALDSKTSKTIMELFRDINKNEQTILMVTHSAVDASYAKRILFIKDGRLYHEIYRGEELQSEFQKRIANSLAMLHESGD persistent 249 ABC transporter ATP-binding protein UniRef50_A0A0Z8FM40,UniRef90_A0A3S7GYN9 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 40125 42080 . + . GCA_005502385.1_00151_gene GCA_005502385.1_00151 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTFRLLWTLVTQNFKTQRHIIIPFILVISTLFGIEFILLSLNMNASIHKHSDVIPVFISIGNFFMCLFGLLFILYANRFIMRRRQKELAMNMILGMEKKHFRLMLFIEGIYQYIIIGCLSIIGGYLFGALTYMSLNRILGYTYVSLKKYPFDISAMRYTLLMLAIMMLFLFILNNIKITFQSPIKLIQQQHPTEKQWSKPLLYILLIVGIITVVDSYMIALKDTLILVSLRNIFIALILVTIGTYCLFISLSVLVIDWLQKIPSVYYRPKYFFTISGLRSRMNSNSIGLASLTMLCTFLIVTLGMSVATYRSVDQRANHLMPTQYRIELSGDVHHSTTSKHKVRQLENEIKRYVDVDAFREYTSGSVAVTYKKGTFVKRDNENSPLDVNSVYLIVMNQQDYNTINHTNLRLKHNEMGILTNHFMFQKLNHIKLMNQTFKTNQLKGDHFSFPFPGAVTLVTHNVNQQRQLIYYYQTTADINSYIAFNLKTKDTQSIDHIESQLMKQYDIQIDKKDELNKEMFDIYGGLIFVGTIVSLVLMIGTFTMMYYKNIAEGYEDRKNYRIMRQVGLEEERIKSVINDQVVIIFTLPIIISMIHVLCASKMIYTLLGILDVNDIKLFLTTYIGVLVFVMIIYALMYVMTSRVYYRLIHR . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 40125 42080 . + . GCA_005502385.1_00151_mRNA GCA_005502385.1_00151 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTFRLLWTLVTQNFKTQRHIIIPFILVISTLFGIEFILLSLNMNASIHKHSDVIPVFISIGNFFMCLFGLLFILYANRFIMRRRQKELAMNMILGMEKKHFRLMLFIEGIYQYIIIGCLSIIGGYLFGALTYMSLNRILGYTYVSLKKYPFDISAMRYTLLMLAIMMLFLFILNNIKITFQSPIKLIQQQHPTEKQWSKPLLYILLIVGIITVVDSYMIALKDTLILVSLRNIFIALILVTIGTYCLFISLSVLVIDWLQKIPSVYYRPKYFFTISGLRSRMNSNSIGLASLTMLCTFLIVTLGMSVATYRSVDQRANHLMPTQYRIELSGDVHHSTTSKHKVRQLENEIKRYVDVDAFREYTSGSVAVTYKKGTFVKRDNENSPLDVNSVYLIVMNQQDYNTINHTNLRLKHNEMGILTNHFMFQKLNHIKLMNQTFKTNQLKGDHFSFPFPGAVTLVTHNVNQQRQLIYYYQTTADINSYIAFNLKTKDTQSIDHIESQLMKQYDIQIDKKDELNKEMFDIYGGLIFVGTIVSLVLMIGTFTMMYYKNIAEGYEDRKNYRIMRQVGLEEERIKSVINDQVVIIFTLPIIISMIHVLCASKMIYTLLGILDVNDIKLFLTTYIGVLVFVMIIYALMYVMTSRVYYRLIHR . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 40125 42080 . + 0 GCA_005502385.1_00151 GCA_005502385.1_00151_gene,GCA_005502385.1_00151_mRNA GCA_005502385.1_00151 ABC transporter permease protein YxdM GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTFRLLWTLVTQNFKTQRHIIIPFILVISTLFGIEFILLSLNMNASIHKHSDVIPVFISIGNFFMCLFGLLFILYANRFIMRRRQKELAMNMILGMEKKHFRLMLFIEGIYQYIIIGCLSIIGGYLFGALTYMSLNRILGYTYVSLKKYPFDISAMRYTLLMLAIMMLFLFILNNIKITFQSPIKLIQQQHPTEKQWSKPLLYILLIVGIITVVDSYMIALKDTLILVSLRNIFIALILVTIGTYCLFISLSVLVIDWLQKIPSVYYRPKYFFTISGLRSRMNSNSIGLASLTMLCTFLIVTLGMSVATYRSVDQRANHLMPTQYRIELSGDVHHSTTSKHKVRQLENEIKRYVDVDAFREYTSGSVAVTYKKGTFVKRDNENSPLDVNSVYLIVMNQQDYNTINHTNLRLKHNEMGILTNHFMFQKLNHIKLMNQTFKTNQLKGDHFSFPFPGAVTLVTHNVNQQRQLIYYYQTTADINSYIAFNLKTKDTQSIDHIESQLMKQYDIQIDKKDELNKEMFDIYGGLIFVGTIVSLVLMIGTFTMMYYKNIAEGYEDRKNYRIMRQVGLEEERIKSVINDQVVIIFTLPIIISMIHVLCASKMIYTLLGILDVNDIKLFLTTYIGVLVFVMIIYALMYVMTSRVYYRLIHR persistent 651 ABC transporter permease UniRef50_Q4L9F9,UniRef90_A0A3S7GZN8 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 42173 42937 . + . GCA_005502385.1_00152_gene GCA_005502385.1_00152 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MVKQYDDTTNRNSNNNIKRTGEHVLTWIGVAIQALVAIMFLMIKPFIGNADFKEQIINETQKQGNEVSITEINNGMDALGGLFNFFTWGAFIPLILAIIGGILINKKPKLAGILLIIAGILAIATNWISLILWLIAGIMLLVRKPKHDMYGNGGYNDHYRRDHHDVNANNNAFILNEEEERQQQRYIKDHYSNKDQAADNNNERYHDTHVNDSNDDDYRDQRYSNHKTNKRSNNFIQDEARKLQEEKDNDPYKY . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 42173 42937 . + . GCA_005502385.1_00152_mRNA GCA_005502385.1_00152 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MVKQYDDTTNRNSNNNIKRTGEHVLTWIGVAIQALVAIMFLMIKPFIGNADFKEQIINETQKQGNEVSITEINNGMDALGGLFNFFTWGAFIPLILAIIGGILINKKPKLAGILLIIAGILAIATNWISLILWLIAGIMLLVRKPKHDMYGNGGYNDHYRRDHHDVNANNNAFILNEEEERQQQRYIKDHYSNKDQAADNNNERYHDTHVNDSNDDDYRDQRYSNHKTNKRSNNFIQDEARKLQEEKDNDPYKY . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 42173 42937 . + 0 GCA_005502385.1_00152 GCA_005502385.1_00152_gene,GCA_005502385.1_00152_mRNA GCA_005502385.1_00152 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MVKQYDDTTNRNSNNNIKRTGEHVLTWIGVAIQALVAIMFLMIKPFIGNADFKEQIINETQKQGNEVSITEINNGMDALGGLFNFFTWGAFIPLILAIIGGILINKKPKLAGILLIIAGILAIATNWISLILWLIAGIMLLVRKPKHDMYGNGGYNDHYRRDHHDVNANNNAFILNEEEERQQQRYIKDHYSNKDQAADNNNERYHDTHVNDSNDDDYRDQRYSNHKTNKRSNNFIQDEARKLQEEKDNDPYKY persistent 254 DUF4064 domain-containing protein WP_049382135.1 UPI00066D2416 UniRef100_UPI00066D2416,UniRef50_A0AAE5JLU1,UniRef90_A0A974QMH9 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 43033 44325 . - . GCA_005502385.1_00153_gene GCA_005502385.1_00153 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTHQHQLHLGVLIYGCGHHQAAWQLPNSSIERLGDIHYYQELAQLSEKGLLDVVFFADNQSFIPSYTSMPSFWFDPLINLTAISQVTQHVGLVPTISSTFSNPFTAARQLLSLDHISGGRVGWNLVTSMTDAEAQNHSMDHLPNHDNRYKKAEEFAQVMNGLFDSWHTEDFKPNRDHHTMINRNIKPLHHNGKYFQVHGPLTTPSSIQGKPVAMQAGASKQGIALATKYADAVYSVSWNMKQAKRYRERLDSEMAQRDHQRYIKVFPGLVTYVGHTHEEALKKKAELDQRLPIKAALKQLSFFIQQDCSQWELDAPVPKLPSLEEFNGPVGRYETILEIIQDKQPTVRELLSYLNAGGGHLTLIGTPKEIVDEMERWFNAGVADGFNLMPPSLPDSLNDVVTLIVPELQRRGLYRHQYKGSTLREHLDLV . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 43033 44325 . - . GCA_005502385.1_00153_mRNA GCA_005502385.1_00153 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTHQHQLHLGVLIYGCGHHQAAWQLPNSSIERLGDIHYYQELAQLSEKGLLDVVFFADNQSFIPSYTSMPSFWFDPLINLTAISQVTQHVGLVPTISSTFSNPFTAARQLLSLDHISGGRVGWNLVTSMTDAEAQNHSMDHLPNHDNRYKKAEEFAQVMNGLFDSWHTEDFKPNRDHHTMINRNIKPLHHNGKYFQVHGPLTTPSSIQGKPVAMQAGASKQGIALATKYADAVYSVSWNMKQAKRYRERLDSEMAQRDHQRYIKVFPGLVTYVGHTHEEALKKKAELDQRLPIKAALKQLSFFIQQDCSQWELDAPVPKLPSLEEFNGPVGRYETILEIIQDKQPTVRELLSYLNAGGGHLTLIGTPKEIVDEMERWFNAGVADGFNLMPPSLPDSLNDVVTLIVPELQRRGLYRHQYKGSTLREHLDLV . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 43033 44325 . - 0 GCA_005502385.1_00153 GCA_005502385.1_00153_gene,GCA_005502385.1_00153_mRNA GCA_005502385.1_00153 Nitrilotriacetate monooxygenase component A GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTHQHQLHLGVLIYGCGHHQAAWQLPNSSIERLGDIHYYQELAQLSEKGLLDVVFFADNQSFIPSYTSMPSFWFDPLINLTAISQVTQHVGLVPTISSTFSNPFTAARQLLSLDHISGGRVGWNLVTSMTDAEAQNHSMDHLPNHDNRYKKAEEFAQVMNGLFDSWHTEDFKPNRDHHTMINRNIKPLHHNGKYFQVHGPLTTPSSIQGKPVAMQAGASKQGIALATKYADAVYSVSWNMKQAKRYRERLDSEMAQRDHQRYIKVFPGLVTYVGHTHEEALKKKAELDQRLPIKAALKQLSFFIQQDCSQWELDAPVPKLPSLEEFNGPVGRYETILEIIQDKQPTVRELLSYLNAGGGHLTLIGTPKEIVDEMERWFNAGVADGFNLMPPSLPDSLNDVVTLIVPELQRRGLYRHQYKGSTLREHLDLV persistent 430 LLM class flavin-dependent oxidoreductase WP_048680648.1 UPI00066090C1 UniRef100_UPI00066090C1,UniRef50_A0A380BXI6,UniRef90_A0A3S7GVJ0 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 44389 45138 . - . GCA_005502385.1_00154_gene GCA_005502385.1_00154 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTRTVLVTGSSRGLGAVIAKTLATQGFEVIINYNQSREAAEALAKELGDKAIAIQADVTQRDEVDRLVNEATHHFGKIDVVVNNALVNFKFDPNAQKAFKDLAWEDYQQQIDGTLKGAFNVTQSVIPQFIERGSGAIVSIGTNLYQHPVVPYHEYTTAKAGLIGFTRNVAAELGQYGITANVVSGGLLKTTDASAVTTPDVFDLIAQTTPLRKVTTPQDVANMVAYLSSEAADGMTGQNITVDGGLTMN . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 44389 45138 . - . GCA_005502385.1_00154_mRNA GCA_005502385.1_00154 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTRTVLVTGSSRGLGAVIAKTLATQGFEVIINYNQSREAAEALAKELGDKAIAIQADVTQRDEVDRLVNEATHHFGKIDVVVNNALVNFKFDPNAQKAFKDLAWEDYQQQIDGTLKGAFNVTQSVIPQFIERGSGAIVSIGTNLYQHPVVPYHEYTTAKAGLIGFTRNVAAELGQYGITANVVSGGLLKTTDASAVTTPDVFDLIAQTTPLRKVTTPQDVANMVAYLSSEAADGMTGQNITVDGGLTMN . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 44389 45138 . - 0 GCA_005502385.1_00154 GCA_005502385.1_00154_gene,GCA_005502385.1_00154_mRNA GCA_005502385.1_00154 3-oxoacyl-[acyl-carrier-protein] reductase FabG GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTRTVLVTGSSRGLGAVIAKTLATQGFEVIINYNQSREAAEALAKELGDKAIAIQADVTQRDEVDRLVNEATHHFGKIDVVVNNALVNFKFDPNAQKAFKDLAWEDYQQQIDGTLKGAFNVTQSVIPQFIERGSGAIVSIGTNLYQHPVVPYHEYTTAKAGLIGFTRNVAAELGQYGITANVVSGGLLKTTDASAVTTPDVFDLIAQTTPLRKVTTPQDVANMVAYLSSEAADGMTGQNITVDGGLTMN persistent 249 3-oxoacyl-ACP reductase 1.1.1.100 GO:0016491 WP_049382134.1 UPI00066B3386 UniRef100_UPI002E16FFB0,UniRef50_A0A0A5GKL6,UniRef90_A0A3S7GZ89 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 45262 45363 . - . GCA_005502385.1_00155_gene GCA_005502385.1_00155 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 45262 45363 . - . GCA_005502385.1_00155_mRNA GCA_005502385.1_00155 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 . . . . . . . GCA_005502385.1|SCOV01000011.1 Infernal:001001 misc_RNA 45262 45363 81.5 - . GCA_005502385.1_00155 GCA_005502385.1_00155_gene,GCA_005502385.1_00155_mRNA GCA_005502385.1_00155 TPP GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 45649 47241 . + . GCA_005502385.1_00156_gene GCA_005502385.1_00156 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNWLAIILFLAVVMGVSLYAFWRSKKIKTDSADGYFMGGNSLTGFTIASTIIMTNLSTEQIVGQNGQSYGKGMEVMAWEVTAAVAVVLLAWIFLPKYLRYGVDTISELLEMRYGTFTKRFVSILFIFTYVVSFLPVVLYSGSLVFNKMFSIGEYLGVSDATATIIIAFVIGAVGVIYLFIGGLSLSAFSDSIYGVGLIIGGLIITILGLHHLGDGNFVKGFDHMVQRTPEKLNAFGAIDSDVVPWPTLFFGMFFNNLFFWCANQMIVQKALAGKNLKEAQKGAIYLSLFKVFGPIFTVIPGVIAYNYFNGGITSNDNAYPALIQAILPDWGYGLFGAVIFGAILSSFVGSLNSTTTLFTLDFYKPIFGKRASDQHIARVGHIATVVIGIIVVGISPLIALFPSGLYAIVQQFNGVYSMPVLALVLVAFYSKHTSKLGAKVALVTHIVLYAAISFMVPQLNYLYTFSFMFFIDLAIILVFNKFKPSNTFDLNTNKAKVDLTPWKYRYITGGIVLGLVVLAYIIFSPLVLAK . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 45649 47241 . + . GCA_005502385.1_00156_mRNA GCA_005502385.1_00156 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNWLAIILFLAVVMGVSLYAFWRSKKIKTDSADGYFMGGNSLTGFTIASTIIMTNLSTEQIVGQNGQSYGKGMEVMAWEVTAAVAVVLLAWIFLPKYLRYGVDTISELLEMRYGTFTKRFVSILFIFTYVVSFLPVVLYSGSLVFNKMFSIGEYLGVSDATATIIIAFVIGAVGVIYLFIGGLSLSAFSDSIYGVGLIIGGLIITILGLHHLGDGNFVKGFDHMVQRTPEKLNAFGAIDSDVVPWPTLFFGMFFNNLFFWCANQMIVQKALAGKNLKEAQKGAIYLSLFKVFGPIFTVIPGVIAYNYFNGGITSNDNAYPALIQAILPDWGYGLFGAVIFGAILSSFVGSLNSTTTLFTLDFYKPIFGKRASDQHIARVGHIATVVIGIIVVGISPLIALFPSGLYAIVQQFNGVYSMPVLALVLVAFYSKHTSKLGAKVALVTHIVLYAAISFMVPQLNYLYTFSFMFFIDLAIILVFNKFKPSNTFDLNTNKAKVDLTPWKYRYITGGIVLGLVVLAYIIFSPLVLAK . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 45649 47241 . + 0 GCA_005502385.1_00156 GCA_005502385.1_00156_gene,GCA_005502385.1_00156_mRNA GCA_005502385.1_00156 putative symporter YidK GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNWLAIILFLAVVMGVSLYAFWRSKKIKTDSADGYFMGGNSLTGFTIASTIIMTNLSTEQIVGQNGQSYGKGMEVMAWEVTAAVAVVLLAWIFLPKYLRYGVDTISELLEMRYGTFTKRFVSILFIFTYVVSFLPVVLYSGSLVFNKMFSIGEYLGVSDATATIIIAFVIGAVGVIYLFIGGLSLSAFSDSIYGVGLIIGGLIITILGLHHLGDGNFVKGFDHMVQRTPEKLNAFGAIDSDVVPWPTLFFGMFFNNLFFWCANQMIVQKALAGKNLKEAQKGAIYLSLFKVFGPIFTVIPGVIAYNYFNGGITSNDNAYPALIQAILPDWGYGLFGAVIFGAILSSFVGSLNSTTTLFTLDFYKPIFGKRASDQHIARVGHIATVVIGIIVVGISPLIALFPSGLYAIVQQFNGVYSMPVLALVLVAFYSKHTSKLGAKVALVTHIVLYAAISFMVPQLNYLYTFSFMFFIDLAIILVFNKFKPSNTFDLNTNKAKVDLTPWKYRYITGGIVLGLVVLAYIIFSPLVLAK persistent 530 solute:sodium symporter family transporter GO:0016020,GO:0022857,GO:0055085 WP_017175459.1 UPI00030EFD9D UniRef100_A0A3S7GVJ5,UniRef50_A0A078M3V7,UniRef90_A0A3S7GVJ5 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 47332 48534 . + . GCA_005502385.1_00157_gene GCA_005502385.1_00157 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MHKIGLIPSPGVSHKHVEAVIPDVKEQLNQRVNDQQEWVFQLHVDLMIGSAEDVHESIDKAAKMKEKHDWDFVVCITDLPSISGNKVVISDFNNDKQVAMLSLPSLGWIDLRRKLRNSLTSIIEQLYYSTSRVAPKIHPLIHPKAVEPNEDETPKQRYIHRWFILSWIQLILGLTRANEPWKNIFNFKKIISVAFATGTYVSIFSMPWELSIQYSIIRFIILMLIAILGMTGWLLYAHQLIERKTAKSQRVYRYIYNFTTVFTLFIITLLNYIILYLLLAISVSLFVPPSLFNQWTSAHPHFTFINYVKLVWFVSSLGLLAGAMGSTVENEEKIRQITYSYRQYHRYKEAEQEKKEKEQAQSSSHDASNQQVEESASNKQNNDNQQDEHKKQDHREEETT . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 47332 48534 . + . GCA_005502385.1_00157_mRNA GCA_005502385.1_00157 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MHKIGLIPSPGVSHKHVEAVIPDVKEQLNQRVNDQQEWVFQLHVDLMIGSAEDVHESIDKAAKMKEKHDWDFVVCITDLPSISGNKVVISDFNNDKQVAMLSLPSLGWIDLRRKLRNSLTSIIEQLYYSTSRVAPKIHPLIHPKAVEPNEDETPKQRYIHRWFILSWIQLILGLTRANEPWKNIFNFKKIISVAFATGTYVSIFSMPWELSIQYSIIRFIILMLIAILGMTGWLLYAHQLIERKTAKSQRVYRYIYNFTTVFTLFIITLLNYIILYLLLAISVSLFVPPSLFNQWTSAHPHFTFINYVKLVWFVSSLGLLAGAMGSTVENEEKIRQITYSYRQYHRYKEAEQEKKEKEQAQSSSHDASNQQVEESASNKQNNDNQQDEHKKQDHREEETT . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 47332 48534 . + 0 GCA_005502385.1_00157 GCA_005502385.1_00157_gene,GCA_005502385.1_00157_mRNA GCA_005502385.1_00157 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MHKIGLIPSPGVSHKHVEAVIPDVKEQLNQRVNDQQEWVFQLHVDLMIGSAEDVHESIDKAAKMKEKHDWDFVVCITDLPSISGNKVVISDFNNDKQVAMLSLPSLGWIDLRRKLRNSLTSIIEQLYYSTSRVAPKIHPLIHPKAVEPNEDETPKQRYIHRWFILSWIQLILGLTRANEPWKNIFNFKKIISVAFATGTYVSIFSMPWELSIQYSIIRFIILMLIAILGMTGWLLYAHQLIERKTAKSQRVYRYIYNFTTVFTLFIITLLNYIILYLLLAISVSLFVPPSLFNQWTSAHPHFTFINYVKLVWFVSSLGLLAGAMGSTVENEEKIRQITYSYRQYHRYKEAEQEKKEKEQAQSSSHDASNQQVEESASNKQNNDNQQDEHKKQDHREEETT persistent 400 5,10-methylene-tetrahydrofolate dehydrogenase WP_037541500.1 UPI00044A2917 UniRef100_A0A3S7GVY9,UniRef50_A0A0H2VJR3,UniRef90_A0A3S7GVY9 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 48531 49637 . + . GCA_005502385.1_00158_gene GCA_005502385.1_00158 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSEEKLIGLVVAPGVTEKLAQSLINDIPNILSEQDNHQRDWKVDLVVDPLTGFAESVEEIFKKIQDYHNKREWDYVVGITDLPMFYHQNVLALDINKKNGAAIFSYPAFGWRPVKNRFKHAIVTIINELHYSERAHIGYDDNNRVKKEINKQFPFSRIEKTEVHLKETGNNHLRYLSNSRSLGMIRLVSGMTFANNPLNMMASLSNIVAIAFTTGAFGLIFSTMWNMGLDFSVWRLFGISIMAILGMLVWIMVSHGLWESTKEAKHKRIVMLYNLTTIMTLFIAIVIYYMILYSLFLIAELVLLPPGFLGQQVGLKGPASVQLYLSIPWFATSISTVAGAIGAGLLNDQLIKESTYGYRQKVRYEKNN . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 48531 49637 . + . GCA_005502385.1_00158_mRNA GCA_005502385.1_00158 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSEEKLIGLVVAPGVTEKLAQSLINDIPNILSEQDNHQRDWKVDLVVDPLTGFAESVEEIFKKIQDYHNKREWDYVVGITDLPMFYHQNVLALDINKKNGAAIFSYPAFGWRPVKNRFKHAIVTIINELHYSERAHIGYDDNNRVKKEINKQFPFSRIEKTEVHLKETGNNHLRYLSNSRSLGMIRLVSGMTFANNPLNMMASLSNIVAIAFTTGAFGLIFSTMWNMGLDFSVWRLFGISIMAILGMLVWIMVSHGLWESTKEAKHKRIVMLYNLTTIMTLFIAIVIYYMILYSLFLIAELVLLPPGFLGQQVGLKGPASVQLYLSIPWFATSISTVAGAIGAGLLNDQLIKESTYGYRQKVRYEKNN . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 48531 49637 . + 0 GCA_005502385.1_00158 GCA_005502385.1_00158_gene,GCA_005502385.1_00158_mRNA GCA_005502385.1_00158 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSEEKLIGLVVAPGVTEKLAQSLINDIPNILSEQDNHQRDWKVDLVVDPLTGFAESVEEIFKKIQDYHNKREWDYVVGITDLPMFYHQNVLALDINKKNGAAIFSYPAFGWRPVKNRFKHAIVTIINELHYSERAHIGYDDNNRVKKEINKQFPFSRIEKTEVHLKETGNNHLRYLSNSRSLGMIRLVSGMTFANNPLNMMASLSNIVAIAFTTGAFGLIFSTMWNMGLDFSVWRLFGISIMAILGMLVWIMVSHGLWESTKEAKHKRIVMLYNLTTIMTLFIAIVIYYMILYSLFLIAELVLLPPGFLGQQVGLKGPASVQLYLSIPWFATSISTVAGAIGAGLLNDQLIKESTYGYRQKVRYEKNN persistent 368 5,10-methylene-tetrahydrofolate dehydrogenase WP_017175457.1 UPI0002F4940B UniRef100_A0A3S7GVV3,UniRef50_Q4A065,UniRef90_A0A3S7GVV3 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 49827 50582 . + . GCA_005502385.1_00159_gene GCA_005502385.1_00159 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKFCPQCGNQIKEGQSFCNKCGSDLKVFKQYRENQLYESAASQKNKRWPYILFVILIVAILISGGLTYYFFFVKPEMVKSEEVTSTHHKTKEDIKKTVRQGEKKSKQKNDKEIRMKSPNIDVMSEDFENTYLKSDCRDGYYGIKVGMTKNEVEKLIGKLTGILEVPGFKWKSTKYGNITVDYSPNNEEGKVIAVGVSPDNVKVDDFLSRYYSYDSYTPTEIIYNNDKSNGYLVAVDIDGNHIAKIQCLAER . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 49827 50582 . + . GCA_005502385.1_00159_mRNA GCA_005502385.1_00159 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKFCPQCGNQIKEGQSFCNKCGSDLKVFKQYRENQLYESAASQKNKRWPYILFVILIVAILISGGLTYYFFFVKPEMVKSEEVTSTHHKTKEDIKKTVRQGEKKSKQKNDKEIRMKSPNIDVMSEDFENTYLKSDCRDGYYGIKVGMTKNEVEKLIGKLTGILEVPGFKWKSTKYGNITVDYSPNNEEGKVIAVGVSPDNVKVDDFLSRYYSYDSYTPTEIIYNNDKSNGYLVAVDIDGNHIAKIQCLAER . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 49827 50582 . + 0 GCA_005502385.1_00159 GCA_005502385.1_00159_gene,GCA_005502385.1_00159_mRNA GCA_005502385.1_00159 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKFCPQCGNQIKEGQSFCNKCGSDLKVFKQYRENQLYESAASQKNKRWPYILFVILIVAILISGGLTYYFFFVKPEMVKSEEVTSTHHKTKEDIKKTVRQGEKKSKQKNDKEIRMKSPNIDVMSEDFENTYLKSDCRDGYYGIKVGMTKNEVEKLIGKLTGILEVPGFKWKSTKYGNITVDYSPNNEEGKVIAVGVSPDNVKVDDFLSRYYSYDSYTPTEIIYNNDKSNGYLVAVDIDGNHIAKIQCLAER shell 251 zinc-ribbon domain-containing protein WP_049420723.1 UPI00066EE941 UniRef100_UPI00066EE941,UniRef50_A0A380FYK9,UniRef90_UPI0008A2129D . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 50650 51387 . + . GCA_005502385.1_00160_gene GCA_005502385.1_00160 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKYCPRCGNHIHETQRFCNQCGNDLEAFEQYRNQMITNSKRKKWSFIVIVILVIAMIVVACSTYYYFFVRPVDAPKKDTPVHQVSKKDSEEGKVPNDPDKEGKETIENKKSPQINVMSDDFLENFMHKNTLNGYMGIKPGMTEKEVERIVGKSTGKIHIDGMDHESIKYGDLAVNYDPHSKEKIVTSVGIAPNNISEEEFISHYNNYDKRNFRDIVYNNIKGNGYEIVVYLDGDKVGLIFAVPEY . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 50650 51387 . + . GCA_005502385.1_00160_mRNA GCA_005502385.1_00160 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKYCPRCGNHIHETQRFCNQCGNDLEAFEQYRNQMITNSKRKKWSFIVIVILVIAMIVVACSTYYYFFVRPVDAPKKDTPVHQVSKKDSEEGKVPNDPDKEGKETIENKKSPQINVMSDDFLENFMHKNTLNGYMGIKPGMTEKEVERIVGKSTGKIHIDGMDHESIKYGDLAVNYDPHSKEKIVTSVGIAPNNISEEEFISHYNNYDKRNFRDIVYNNIKGNGYEIVVYLDGDKVGLIFAVPEY . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 50650 51387 . + 0 GCA_005502385.1_00160 GCA_005502385.1_00160_gene,GCA_005502385.1_00160_mRNA GCA_005502385.1_00160 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKYCPRCGNHIHETQRFCNQCGNDLEAFEQYRNQMITNSKRKKWSFIVIVILVIAMIVVACSTYYYFFVRPVDAPKKDTPVHQVSKKDSEEGKVPNDPDKEGKETIENKKSPQINVMSDDFLENFMHKNTLNGYMGIKPGMTEKEVERIVGKSTGKIHIDGMDHESIKYGDLAVNYDPHSKEKIVTSVGIAPNNISEEEFISHYNNYDKRNFRDIVYNNIKGNGYEIVVYLDGDKVGLIFAVPEY shell 245 DUF2116 domain-containing protein WP_049420725.1 UPI00066BFAB7 UniRef100_UPI0010F6F3A6,UniRef50_UPI001C92E0AE,UniRef90_UPI001C92E0AE . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 51605 52336 . + . GCA_005502385.1_00161_gene GCA_005502385.1_00161 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSVSKITYESFDGDPFIDSISTDDATKGAYEILKWAYTTYGEDIVYSCSFGAESMVLINLIYQIKPDAQIVFLDTDLHFQETYDLIDRVKECFPKLRIEMKKPELTLEEQAEKYNPALWKNNPNQCCYIRKIKPLEEVLGGAIAWISGLRRDQSPTRAKTNFINKDERFKSIKVCPLIYWTEDDVWDYIKQHDLPYNELHDQHYPSIGCIPCTAPVFNSDDSRAGRWSSFEKTECGLHVADKP . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 51605 52336 . + . GCA_005502385.1_00161_mRNA GCA_005502385.1_00161 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSVSKITYESFDGDPFIDSISTDDATKGAYEILKWAYTTYGEDIVYSCSFGAESMVLINLIYQIKPDAQIVFLDTDLHFQETYDLIDRVKECFPKLRIEMKKPELTLEEQAEKYNPALWKNNPNQCCYIRKIKPLEEVLGGAIAWISGLRRDQSPTRAKTNFINKDERFKSIKVCPLIYWTEDDVWDYIKQHDLPYNELHDQHYPSIGCIPCTAPVFNSDDSRAGRWSSFEKTECGLHVADKP . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 51605 52336 . + 0 GCA_005502385.1_00161 GCA_005502385.1_00161_gene,GCA_005502385.1_00161_mRNA GCA_005502385.1_00161 Phosphoadenosine phosphosulfate reductase GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSVSKITYESFDGDPFIDSISTDDATKGAYEILKWAYTTYGEDIVYSCSFGAESMVLINLIYQIKPDAQIVFLDTDLHFQETYDLIDRVKECFPKLRIEMKKPELTLEEQAEKYNPALWKNNPNQCCYIRKIKPLEEVLGGAIAWISGLRRDQSPTRAKTNFINKDERFKSIKVCPLIYWTEDDVWDYIKQHDLPYNELHDQHYPSIGCIPCTAPVFNSDDSRAGRWSSFEKTECGLHVADKP persistent 243 cysH phosphoadenylyl-sulfate reductase 1.8.4.10,1.8.4.8 GO:0003824,GO:0004604,GO:0005737,GO:0019344,GO:0019379,GO:0043866,GO:0051539,GO:0070814 COG0175,EH WP_017175456.1 UPI0003161234 UniRef100_A0A4V6MZF9,UniRef50_P94498,UniRef90_Q4L9F3 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 52500 54353 . + . GCA_005502385.1_00162_gene GCA_005502385.1_00162 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNLSVTNSPFTEGQATQINELLQTLTPEQKVWLSGYLVANQQLTSGTSDTQGSQIGAVSKDTETMLQQNEPTIQPEKRAITLLYGSETGNAQGLAEIFEERLSNIGHNVTLKAMDEFKSKNLKNVEDLFIITSTQGEGDPPDNAAELHEFIHGRKAPKLEGVRFSVLALGDQTYEFFCQTGKDFDKKLEELGAERLYERVDCDVDYEEDAEKWMANVINTIDSAPEGTQSEQVVSESIKSAKEKKYSKANPYQAEVLENINLNGRGSNKETRHIEFLLDNFGEEYEVGDCLVVLPQNDPALVELLMSTLGWDPGDQIQISEDGDTISLEEALTSYFEITKLTRPLLQNAAAYFDNEALEDKVQDSEWIQNYIEGRDFIDLLNDFPPEELEPEDLYQILRKLPPREYSISSSYQSLPDEVHITVGAVRYNTHGRDRSGVCSVQFAERIQPGDTVPIYLKRNPNFKFPKNGDTPVIMIGPGTGIAPFRAHMQEREEYGYKGNTWLFFGDQHFTTDFLYQTEWQEWLKDGFLEKMNVAFSRDTDQKVYVQHRIAEHSKEFNEWLEKGASIYICGDEKNMAKDVHQAIRNVLVKEQNLTEEDAESYLKQMKKDKRYQRDVY . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 52500 54353 . + . GCA_005502385.1_00162_mRNA GCA_005502385.1_00162 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNLSVTNSPFTEGQATQINELLQTLTPEQKVWLSGYLVANQQLTSGTSDTQGSQIGAVSKDTETMLQQNEPTIQPEKRAITLLYGSETGNAQGLAEIFEERLSNIGHNVTLKAMDEFKSKNLKNVEDLFIITSTQGEGDPPDNAAELHEFIHGRKAPKLEGVRFSVLALGDQTYEFFCQTGKDFDKKLEELGAERLYERVDCDVDYEEDAEKWMANVINTIDSAPEGTQSEQVVSESIKSAKEKKYSKANPYQAEVLENINLNGRGSNKETRHIEFLLDNFGEEYEVGDCLVVLPQNDPALVELLMSTLGWDPGDQIQISEDGDTISLEEALTSYFEITKLTRPLLQNAAAYFDNEALEDKVQDSEWIQNYIEGRDFIDLLNDFPPEELEPEDLYQILRKLPPREYSISSSYQSLPDEVHITVGAVRYNTHGRDRSGVCSVQFAERIQPGDTVPIYLKRNPNFKFPKNGDTPVIMIGPGTGIAPFRAHMQEREEYGYKGNTWLFFGDQHFTTDFLYQTEWQEWLKDGFLEKMNVAFSRDTDQKVYVQHRIAEHSKEFNEWLEKGASIYICGDEKNMAKDVHQAIRNVLVKEQNLTEEDAESYLKQMKKDKRYQRDVY . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 52500 54353 . + 0 GCA_005502385.1_00162 GCA_005502385.1_00162_gene,GCA_005502385.1_00162_mRNA GCA_005502385.1_00162 Sulfite reductase [NADPH] flavoprotein alpha-component GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNLSVTNSPFTEGQATQINELLQTLTPEQKVWLSGYLVANQQLTSGTSDTQGSQIGAVSKDTETMLQQNEPTIQPEKRAITLLYGSETGNAQGLAEIFEERLSNIGHNVTLKAMDEFKSKNLKNVEDLFIITSTQGEGDPPDNAAELHEFIHGRKAPKLEGVRFSVLALGDQTYEFFCQTGKDFDKKLEELGAERLYERVDCDVDYEEDAEKWMANVINTIDSAPEGTQSEQVVSESIKSAKEKKYSKANPYQAEVLENINLNGRGSNKETRHIEFLLDNFGEEYEVGDCLVVLPQNDPALVELLMSTLGWDPGDQIQISEDGDTISLEEALTSYFEITKLTRPLLQNAAAYFDNEALEDKVQDSEWIQNYIEGRDFIDLLNDFPPEELEPEDLYQILRKLPPREYSISSSYQSLPDEVHITVGAVRYNTHGRDRSGVCSVQFAERIQPGDTVPIYLKRNPNFKFPKNGDTPVIMIGPGTGIAPFRAHMQEREEYGYKGNTWLFFGDQHFTTDFLYQTEWQEWLKDGFLEKMNVAFSRDTDQKVYVQHRIAEHSKEFNEWLEKGASIYICGDEKNMAKDVHQAIRNVLVKEQNLTEEDAESYLKQMKKDKRYQRDVY persistent 617 assimilatory sulfite reductase (NADPH) flavoprotein subunit 1.8.1.2 GO:0004783,GO:0006790,GO:0009337,GO:0010181,GO:0019344,GO:0050660 WP_017175455.1 UPI0002E953F7 UniRef100_A0A8X8GN64,UniRef50_A0A654C556,UniRef90_A0A8X8GN64 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 54372 56093 . + . GCA_005502385.1_00163_gene GCA_005502385.1_00163 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MAKTIKQIADELNENLDALEHLKTESNYLRGTIEEGLADPLTGAISDDDTKLLKFHGSYQQDDRDVRDERRKQKLEPAYAFMIRVRLPGGKATPEQWIAMDDISNNYANHTLKLTTRQTFQFHGILKRNLKSSMKKINESVLDTIAACGDVNRNTMCNPNPYQSNINKEILDYATAISDHLLPKTNAYHEIWLDGEKVLDSKEEVEPMYGEKYLPRKFKIGIAVPPSNDIDVFSQDIGLIAIVENDELVGFNVAIGGGMGMTHGNPDTYPQVGRIAGFIPKDKVIDVCEALLTIQRDLGNRSNRKNARFKYTVDRFGVDNIVKELNTRLGWEISEAREFKFEHNGDRLGWIEGEKGVWNYTLFIQNGRVKDTEDYKLKTALREIAETHTGDFRLSPNQNLIIANVTEEKKADIQSLIDKYGLTDGKNYSGLRRNSMACVAFPTCGLAMAESERYLPTLLSKIEDLLDEASVSEEEITIRMTGCPNGCARPALAEIAFIGKAPGKYNMYLGGSFNGDRLNKLYKENIDEKEILESLRPILMDYGKSRLEGEHFGDFVIRSGVVAKVHDGRDFHS . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 54372 56093 . + . GCA_005502385.1_00163_mRNA GCA_005502385.1_00163 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MAKTIKQIADELNENLDALEHLKTESNYLRGTIEEGLADPLTGAISDDDTKLLKFHGSYQQDDRDVRDERRKQKLEPAYAFMIRVRLPGGKATPEQWIAMDDISNNYANHTLKLTTRQTFQFHGILKRNLKSSMKKINESVLDTIAACGDVNRNTMCNPNPYQSNINKEILDYATAISDHLLPKTNAYHEIWLDGEKVLDSKEEVEPMYGEKYLPRKFKIGIAVPPSNDIDVFSQDIGLIAIVENDELVGFNVAIGGGMGMTHGNPDTYPQVGRIAGFIPKDKVIDVCEALLTIQRDLGNRSNRKNARFKYTVDRFGVDNIVKELNTRLGWEISEAREFKFEHNGDRLGWIEGEKGVWNYTLFIQNGRVKDTEDYKLKTALREIAETHTGDFRLSPNQNLIIANVTEEKKADIQSLIDKYGLTDGKNYSGLRRNSMACVAFPTCGLAMAESERYLPTLLSKIEDLLDEASVSEEEITIRMTGCPNGCARPALAEIAFIGKAPGKYNMYLGGSFNGDRLNKLYKENIDEKEILESLRPILMDYGKSRLEGEHFGDFVIRSGVVAKVHDGRDFHS . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 54372 56093 . + 0 GCA_005502385.1_00163 GCA_005502385.1_00163_gene,GCA_005502385.1_00163_mRNA GCA_005502385.1_00163 Sulfite reductase [NADPH] hemoprotein beta-component GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MAKTIKQIADELNENLDALEHLKTESNYLRGTIEEGLADPLTGAISDDDTKLLKFHGSYQQDDRDVRDERRKQKLEPAYAFMIRVRLPGGKATPEQWIAMDDISNNYANHTLKLTTRQTFQFHGILKRNLKSSMKKINESVLDTIAACGDVNRNTMCNPNPYQSNINKEILDYATAISDHLLPKTNAYHEIWLDGEKVLDSKEEVEPMYGEKYLPRKFKIGIAVPPSNDIDVFSQDIGLIAIVENDELVGFNVAIGGGMGMTHGNPDTYPQVGRIAGFIPKDKVIDVCEALLTIQRDLGNRSNRKNARFKYTVDRFGVDNIVKELNTRLGWEISEAREFKFEHNGDRLGWIEGEKGVWNYTLFIQNGRVKDTEDYKLKTALREIAETHTGDFRLSPNQNLIIANVTEEKKADIQSLIDKYGLTDGKNYSGLRRNSMACVAFPTCGLAMAESERYLPTLLSKIEDLLDEASVSEEEITIRMTGCPNGCARPALAEIAFIGKAPGKYNMYLGGSFNGDRLNKLYKENIDEKEILESLRPILMDYGKSRLEGEHFGDFVIRSGVVAKVHDGRDFHS persistent 573 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 1.8.1.2 GO:0000103,GO:0004783,GO:0008652,GO:0009337,GO:0050661,GO:0051539 WP_049414259.1 UPI00066D91D5 UniRef100_UPI00066D91D5,UniRef50_C0Z9X2,UniRef90_A0A4Q9WRX3 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 56129 56893 . + . GCA_005502385.1_00164_gene GCA_005502385.1_00164 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MGKVYLVGAGPGDPDLITVKGMKAIQASDVILYDRLVNKEILDFAKPHTKFFYCGKDPNKHSLPQEETNRMLVNLAKKGHTITRLKGGDPFVFGRGGEEAEILSDNQIPFEIVPGITSGIAAPAYAGIPVTHRDYSSSVAFVTAVNKPGMTKEAYWEHLAHGPETLCIYMGVKRLPEICELLVRHGKSVDTPVALVHLGTTVSQKTVTGTLGSIVQRASEIKNPAMIVIGDVVNMRQKISWFKEQVSDVEMTLP . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 56129 56893 . + . GCA_005502385.1_00164_mRNA GCA_005502385.1_00164 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MGKVYLVGAGPGDPDLITVKGMKAIQASDVILYDRLVNKEILDFAKPHTKFFYCGKDPNKHSLPQEETNRMLVNLAKKGHTITRLKGGDPFVFGRGGEEAEILSDNQIPFEIVPGITSGIAAPAYAGIPVTHRDYSSSVAFVTAVNKPGMTKEAYWEHLAHGPETLCIYMGVKRLPEICELLVRHGKSVDTPVALVHLGTTVSQKTVTGTLGSIVQRASEIKNPAMIVIGDVVNMRQKISWFKEQVSDVEMTLP . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 56129 56893 . + 0 GCA_005502385.1_00164 GCA_005502385.1_00164_gene,GCA_005502385.1_00164_mRNA GCA_005502385.1_00164 Uroporphyrinogen-III C-methyltransferase GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MGKVYLVGAGPGDPDLITVKGMKAIQASDVILYDRLVNKEILDFAKPHTKFFYCGKDPNKHSLPQEETNRMLVNLAKKGHTITRLKGGDPFVFGRGGEEAEILSDNQIPFEIVPGITSGIAAPAYAGIPVTHRDYSSSVAFVTAVNKPGMTKEAYWEHLAHGPETLCIYMGVKRLPEICELLVRHGKSVDTPVALVHLGTTVSQKTVTGTLGSIVQRASEIKNPAMIVIGDVVNMRQKISWFKEQVSDVEMTLP persistent 254 uroporphyrinogen-III C-methyltransferase WP_017175453.1 UPI0002D7196A UniRef100_A0A3S7GZP3,UniRef50_P29928,UniRef90_A0A3S7GZP3 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 56927 57538 . + . GCA_005502385.1_00165_gene GCA_005502385.1_00165 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNHMPLMIDLSQKSIVIVGGGKVATKRASTLIEYCADVHIVSPTISTTLKELLDNENITWSQKEFEPQDVEHADLVVIATNNNDVNTKVLESVPHHALCNHASKAQVGNVTIPSILKRGKLSISVSTNGASPKLNKKIISRISDMYDESYEMYIDFLYESRQLIKRLSIEPSRKQELLQHILSDEYLDEVKQQEFTRWLHLQV . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 56927 57538 . + . GCA_005502385.1_00165_mRNA GCA_005502385.1_00165 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNHMPLMIDLSQKSIVIVGGGKVATKRASTLIEYCADVHIVSPTISTTLKELLDNENITWSQKEFEPQDVEHADLVVIATNNNDVNTKVLESVPHHALCNHASKAQVGNVTIPSILKRGKLSISVSTNGASPKLNKKIISRISDMYDESYEMYIDFLYESRQLIKRLSIEPSRKQELLQHILSDEYLDEVKQQEFTRWLHLQV . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 56927 57538 . + 0 GCA_005502385.1_00165 GCA_005502385.1_00165_gene,GCA_005502385.1_00165_mRNA GCA_005502385.1_00165 Precorrin-2 dehydrogenase GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNHMPLMIDLSQKSIVIVGGGKVATKRASTLIEYCADVHIVSPTISTTLKELLDNENITWSQKEFEPQDVEHADLVVIATNNNDVNTKVLESVPHHALCNHASKAQVGNVTIPSILKRGKLSISVSTNGASPKLNKKIISRISDMYDESYEMYIDFLYESRQLIKRLSIEPSRKQELLQHILSDEYLDEVKQQEFTRWLHLQV persistent 203 NAD(P)-binding protein WP_017175452.1 UPI0002E25B94 UniRef100_A0A4Q9WPL0,UniRef50_A0A380FX36,UniRef90_A0A4Q9WPL0 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 57560 58435 . + . GCA_005502385.1_00166_gene GCA_005502385.1_00166 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MRKLFIFALAGFLAQLVDGSLGMGFGASSSSILLTYGIAPAIVSATVHFSEIATTAASGTSHWKFENVHKPTMLKLAIPGSISGFIGAALLTQIHGDYIKPYIALFLLSMGFYILYQFLFKRHKDIHTHVGTLSSAKLVPQGAVAGFLDAIGGGGWGPVNTPLLLASHKIQPRYAIGTVSASEFFVTLSTSLSFIIFLGFTQINWWFVIALSIGGMIAAPISAYLTKILPINILAICVGGLIIFTNSNALMTYFIKDTTVTNVIRFAIICAIIVLVIITIIRNKKLSFSYK . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 57560 58435 . + . GCA_005502385.1_00166_mRNA GCA_005502385.1_00166 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MRKLFIFALAGFLAQLVDGSLGMGFGASSSSILLTYGIAPAIVSATVHFSEIATTAASGTSHWKFENVHKPTMLKLAIPGSISGFIGAALLTQIHGDYIKPYIALFLLSMGFYILYQFLFKRHKDIHTHVGTLSSAKLVPQGAVAGFLDAIGGGGWGPVNTPLLLASHKIQPRYAIGTVSASEFFVTLSTSLSFIIFLGFTQINWWFVIALSIGGMIAAPISAYLTKILPINILAICVGGLIIFTNSNALMTYFIKDTTVTNVIRFAIICAIIVLVIITIIRNKKLSFSYK . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 57560 58435 . + 0 GCA_005502385.1_00166 GCA_005502385.1_00166_gene,GCA_005502385.1_00166_mRNA GCA_005502385.1_00166 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MRKLFIFALAGFLAQLVDGSLGMGFGASSSSILLTYGIAPAIVSATVHFSEIATTAASGTSHWKFENVHKPTMLKLAIPGSISGFIGAALLTQIHGDYIKPYIALFLLSMGFYILYQFLFKRHKDIHTHVGTLSSAKLVPQGAVAGFLDAIGGGGWGPVNTPLLLASHKIQPRYAIGTVSASEFFVTLSTSLSFIIFLGFTQINWWFVIALSIGGMIAAPISAYLTKILPINILAICVGGLIIFTNSNALMTYFIKDTTVTNVIRFAIICAIIVLVIITIIRNKKLSFSYK persistent 291 putative membrane transporter protein WP_017175451.1 UPI000301DA76 UniRef100_A0A3S7GVK0,UniRef50_B9DLM6,UniRef90_A0A657M4B7 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 58478 59659 . + . GCA_005502385.1_00167_gene GCA_005502385.1_00167 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MMSTNEDIINYTIKPHGGELINRVVEGKEREALIEKANAFKSLTLNPWSISDLELIAIGGFSPLTGFMGEADYKKVVEDTHLENGLVWSIPITLPVTETQANEFNIGDDIALYGEDEVLYGTLKLEEKYTYDKEKEAQNVYGTTEEAHPGVKKVYEKGNVYLAGPIQLVNRPKHDEFSDYHLDPAETRQLFKDLGWKTVVGFQTRNPVHRAHEYIQKSALEIVDGLLLNPLVGETKADDIPADVRMESYQAILKNYFPKDRARLVIYPAAMRYAGPREAILHATVRKNYGCTHFIVGRDHAGVGDYYGTYEAQELISQFEDELDIHILKFEHAFYCKKCSNMATAKTCPHDASDHVHLSGTKVREKLRNGESLPKEFSRPEVAEVLIKGLRQK . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 58478 59659 . + . GCA_005502385.1_00167_mRNA GCA_005502385.1_00167 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MMSTNEDIINYTIKPHGGELINRVVEGKEREALIEKANAFKSLTLNPWSISDLELIAIGGFSPLTGFMGEADYKKVVEDTHLENGLVWSIPITLPVTETQANEFNIGDDIALYGEDEVLYGTLKLEEKYTYDKEKEAQNVYGTTEEAHPGVKKVYEKGNVYLAGPIQLVNRPKHDEFSDYHLDPAETRQLFKDLGWKTVVGFQTRNPVHRAHEYIQKSALEIVDGLLLNPLVGETKADDIPADVRMESYQAILKNYFPKDRARLVIYPAAMRYAGPREAILHATVRKNYGCTHFIVGRDHAGVGDYYGTYEAQELISQFEDELDIHILKFEHAFYCKKCSNMATAKTCPHDASDHVHLSGTKVREKLRNGESLPKEFSRPEVAEVLIKGLRQK . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 58478 59659 . + 0 GCA_005502385.1_00167 GCA_005502385.1_00167_gene,GCA_005502385.1_00167_mRNA GCA_005502385.1_00167 Sulfate adenylyltransferase GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MMSTNEDIINYTIKPHGGELINRVVEGKEREALIEKANAFKSLTLNPWSISDLELIAIGGFSPLTGFMGEADYKKVVEDTHLENGLVWSIPITLPVTETQANEFNIGDDIALYGEDEVLYGTLKLEEKYTYDKEKEAQNVYGTTEEAHPGVKKVYEKGNVYLAGPIQLVNRPKHDEFSDYHLDPAETRQLFKDLGWKTVVGFQTRNPVHRAHEYIQKSALEIVDGLLLNPLVGETKADDIPADVRMESYQAILKNYFPKDRARLVIYPAAMRYAGPREAILHATVRKNYGCTHFIVGRDHAGVGDYYGTYEAQELISQFEDELDIHILKFEHAFYCKKCSNMATAKTCPHDASDHVHLSGTKVREKLRNGESLPKEFSRPEVAEVLIKGLRQK persistent 393 Sulfate adenylyltransferase UniRef50_O34764,UniRef90_A0A3S7GXY0 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 59678 60277 . + . GCA_005502385.1_00168_gene GCA_005502385.1_00168 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSQSTNITWHDSEVTKEDRQHQNGHKSAVIWFTGLSGSGKSTISVALEKALFEKDKHSYRLDGDNVRHGLNKNLGFSPEDRKENIRRIGEVSKLLVDAGTIAITAFISPYREDRDEVRDILEDGEFIEVYTECSVEECEKRDPKGLYEKARSGEIKEFTGISAPYEAPKHPEITINTETQSIDESVEHILNYLKEHKYI . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 59678 60277 . + . GCA_005502385.1_00168_mRNA GCA_005502385.1_00168 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSQSTNITWHDSEVTKEDRQHQNGHKSAVIWFTGLSGSGKSTISVALEKALFEKDKHSYRLDGDNVRHGLNKNLGFSPEDRKENIRRIGEVSKLLVDAGTIAITAFISPYREDRDEVRDILEDGEFIEVYTECSVEECEKRDPKGLYEKARSGEIKEFTGISAPYEAPKHPEITINTETQSIDESVEHILNYLKEHKYI . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 59678 60277 . + 0 GCA_005502385.1_00168 GCA_005502385.1_00168_gene,GCA_005502385.1_00168_mRNA GCA_005502385.1_00168 putative adenylyl-sulfate kinase GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSQSTNITWHDSEVTKEDRQHQNGHKSAVIWFTGLSGSGKSTISVALEKALFEKDKHSYRLDGDNVRHGLNKNLGFSPEDRKENIRRIGEVSKLLVDAGTIAITAFISPYREDRDEVRDILEDGEFIEVYTECSVEECEKRDPKGLYEKARSGEIKEFTGISAPYEAPKHPEITINTETQSIDESVEHILNYLKEHKYI persistent 199 Adenylyl-sulfate kinase WP_017175449.1 UPI000317A96E UniRef100_A0A3S7GZ97,UniRef50_P0A6J1,UniRef90_A0A380FXL0 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 60706 61488 . + . GCA_005502385.1_00169_gene GCA_005502385.1_00169 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKIATVTIATAGIATVGFAHHDAHAAENNGYNPNDPTSYSYSYTIDQQGNYHYTWKGNWSPDRLNHTNDSNHSQSNYNNYNNNSYNYNSNYSYTTNNNQTSTNNNQSYTTNNTTGGLGANTASTSNSNVKVTTQSAPRTQSTASTQAFSGKTNSGANYYTWGQCTYYVYDKVGGSIGNTWGNANNWANAAAQSGYTVNNTPKAGAVMQTTQGGYGHVAYVENVNSDGSVTVSEMNYQGVGVVSTRTISASQASSYNYIS . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 60706 61488 . + . GCA_005502385.1_00169_mRNA GCA_005502385.1_00169 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKIATVTIATAGIATVGFAHHDAHAAENNGYNPNDPTSYSYSYTIDQQGNYHYTWKGNWSPDRLNHTNDSNHSQSNYNNYNNNSYNYNSNYSYTTNNNQTSTNNNQSYTTNNTTGGLGANTASTSNSNVKVTTQSAPRTQSTASTQAFSGKTNSGANYYTWGQCTYYVYDKVGGSIGNTWGNANNWANAAAQSGYTVNNTPKAGAVMQTTQGGYGHVAYVENVNSDGSVTVSEMNYQGVGVVSTRTISASQASSYNYIS . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 60706 61488 . + 0 GCA_005502385.1_00169 GCA_005502385.1_00169_gene,GCA_005502385.1_00169_mRNA GCA_005502385.1_00169 Staphylococcal secretory antigen SsaA GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKIATVTIATAGIATVGFAHHDAHAAENNGYNPNDPTSYSYSYTIDQQGNYHYTWKGNWSPDRLNHTNDSNHSQSNYNNYNNNSYNYNSNYSYTTNNNQTSTNNNQSYTTNNTTGGLGANTASTSNSNVKVTTQSAPRTQSTASTQAFSGKTNSGANYYTWGQCTYYVYDKVGGSIGNTWGNANNWANAAAQSGYTVNNTPKAGAVMQTTQGGYGHVAYVENVNSDGSVTVSEMNYQGVGVVSTRTISASQASSYNYIS persistent 260 CHAP domain-containing protein WP_002488240.1 UPI00024E1942 UniRef100_UPI00024E1942,UniRef50_Q2G2J2,UniRef90_A0A974QMD7 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 61710 61952 . + . GCA_005502385.1_00170_gene GCA_005502385.1_00170 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MALGVLQWILVIAIVVITIGVIFGLIWGSLFEERFYRSRSKKEEEARIEKNLKMAKGHTDDDVAYDEEGRASLNEDDKKQ . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 61710 61952 . + . GCA_005502385.1_00170_mRNA GCA_005502385.1_00170 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MALGVLQWILVIAIVVITIGVIFGLIWGSLFEERFYRSRSKKEEEARIEKNLKMAKGHTDDDVAYDEEGRASLNEDDKKQ . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 61710 61952 . + 0 GCA_005502385.1_00170 GCA_005502385.1_00170_gene,GCA_005502385.1_00170_mRNA GCA_005502385.1_00170 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MALGVLQWILVIAIVVITIGVIFGLIWGSLFEERFYRSRSKKEEEARIEKNLKMAKGHTDDDVAYDEEGRASLNEDDKKQ persistent 80 hypothetical protein WP_002449304.1 UPI00019FC549 UniRef100_A0AAE5JN22,UniRef50_A0A974QMI8,UniRef90_A0A974QMI8 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 62118 63410 . + . GCA_005502385.1_00171_gene GCA_005502385.1_00171 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MLLFIVEIIIMIVAIMLGLRTAGALGCGIFAIVAQLIMIFGFQLPPGSAPVTAVLIILAIGIAGGTLQATGGIDYLVYLASKIIERFPKSIIFIAPMIVFVFVFGVGTANIALSLEPIIAQTAVKAKIQPKRPLIASVLTANLALLCSPAASATAYIISVLAGHDISMGQYLSIVLPTSLITMFMLSIFCTFVGRKNTITKSEIAHTPDVDVNHAFSTRVKIGVLAFILCVFGILTFGIFPQFMPSFNVNGKEVTVSMTEIVQFFMYLSAAINLLMLKVNTSDILSSNITQSAIGALFAVLGPGWLGATVFNAPHNLHIIQNDVGKTIQHMPWLVIILVAVVAMIVISQTATASIMVPIVMSMGIPPMYFVAMVQTLNVNFVIPAQPTLLFAVNLDETGRTRPTSFIIPGFFAIGISVIVGFIIKIILGY . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 62118 63410 . + . GCA_005502385.1_00171_mRNA GCA_005502385.1_00171 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MLLFIVEIIIMIVAIMLGLRTAGALGCGIFAIVAQLIMIFGFQLPPGSAPVTAVLIILAIGIAGGTLQATGGIDYLVYLASKIIERFPKSIIFIAPMIVFVFVFGVGTANIALSLEPIIAQTAVKAKIQPKRPLIASVLTANLALLCSPAASATAYIISVLAGHDISMGQYLSIVLPTSLITMFMLSIFCTFVGRKNTITKSEIAHTPDVDVNHAFSTRVKIGVLAFILCVFGILTFGIFPQFMPSFNVNGKEVTVSMTEIVQFFMYLSAAINLLMLKVNTSDILSSNITQSAIGALFAVLGPGWLGATVFNAPHNLHIIQNDVGKTIQHMPWLVIILVAVVAMIVISQTATASIMVPIVMSMGIPPMYFVAMVQTLNVNFVIPAQPTLLFAVNLDETGRTRPTSFIIPGFFAIGISVIVGFIIKIILGY . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 62118 63410 . + 0 GCA_005502385.1_00171 GCA_005502385.1_00171_gene,GCA_005502385.1_00171_mRNA GCA_005502385.1_00171 Anaerobic C4-dicarboxylate transporter DcuA GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MLLFIVEIIIMIVAIMLGLRTAGALGCGIFAIVAQLIMIFGFQLPPGSAPVTAVLIILAIGIAGGTLQATGGIDYLVYLASKIIERFPKSIIFIAPMIVFVFVFGVGTANIALSLEPIIAQTAVKAKIQPKRPLIASVLTANLALLCSPAASATAYIISVLAGHDISMGQYLSIVLPTSLITMFMLSIFCTFVGRKNTITKSEIAHTPDVDVNHAFSTRVKIGVLAFILCVFGILTFGIFPQFMPSFNVNGKEVTVSMTEIVQFFMYLSAAINLLMLKVNTSDILSSNITQSAIGALFAVLGPGWLGATVFNAPHNLHIIQNDVGKTIQHMPWLVIILVAVVAMIVISQTATASIMVPIVMSMGIPPMYFVAMVQTLNVNFVIPAQPTLLFAVNLDETGRTRPTSFIIPGFFAIGISVIVGFIIKIILGY persistent 430 Anaerobic C4-dicarboxylate transporter WP_002488287.1 UPI00024E1943 UniRef100_UPI00024E1943,UniRef50_B9DJR0,UniRef90_A0A974QME3 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 63840 65462 . + . GCA_005502385.1_00172_gene GCA_005502385.1_00172 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKEKIMDWPTFIGTVIVLLAAVIPMMVFPSASEKVITDINSAISNSIGSVYLFIGLAVLSFVLYIAFGRYGNVTLGKASDKPEFNNFSWAAMLFCAGIGSDILYWGVIEWAFYYQVPPNGAKGMTDEALTYATQYGMFHWGPIAWAIYVLPALPIGYLVFVKKQPVYKISQACRPVLKGQTDKFLGKLVDILFIFGLLGGAATSLALGVPLISSGIERLTGIDGDNMVIRSIILFTITVIFAISSYTGLKKGIQKLSDINVWLSFLLLAFVFIVGPTIFIMETTLTGFGNMMRDFFHMATWMEPFGGIRNRKETNFPQDWTIFYWSWWLVYAPFIGLFIARISKGRRLKEVILGTIAYGTLGCVLFFGIFGNYAVYLQISGQFNVVDFLNKHSTEATIIEVMHQLPMGSLIIVLFLISAFLFLATTFDSGSYILAAASQKKVIGEPLKANRLFWAFALCLLPFSLMLVGGERALEVLKTASLLASVPLLFIFTFMMISFIITLNKDRIKLETRADKLKEVERRSLRIVQVKSDPEDDNL . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 63840 65462 . + . GCA_005502385.1_00172_mRNA GCA_005502385.1_00172 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKEKIMDWPTFIGTVIVLLAAVIPMMVFPSASEKVITDINSAISNSIGSVYLFIGLAVLSFVLYIAFGRYGNVTLGKASDKPEFNNFSWAAMLFCAGIGSDILYWGVIEWAFYYQVPPNGAKGMTDEALTYATQYGMFHWGPIAWAIYVLPALPIGYLVFVKKQPVYKISQACRPVLKGQTDKFLGKLVDILFIFGLLGGAATSLALGVPLISSGIERLTGIDGDNMVIRSIILFTITVIFAISSYTGLKKGIQKLSDINVWLSFLLLAFVFIVGPTIFIMETTLTGFGNMMRDFFHMATWMEPFGGIRNRKETNFPQDWTIFYWSWWLVYAPFIGLFIARISKGRRLKEVILGTIAYGTLGCVLFFGIFGNYAVYLQISGQFNVVDFLNKHSTEATIIEVMHQLPMGSLIIVLFLISAFLFLATTFDSGSYILAAASQKKVIGEPLKANRLFWAFALCLLPFSLMLVGGERALEVLKTASLLASVPLLFIFTFMMISFIITLNKDRIKLETRADKLKEVERRSLRIVQVKSDPEDDNL . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 63840 65462 . + 0 GCA_005502385.1_00172 GCA_005502385.1_00172_gene,GCA_005502385.1_00172_mRNA GCA_005502385.1_00172 Glycine betaine transporter BetL GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKEKIMDWPTFIGTVIVLLAAVIPMMVFPSASEKVITDINSAISNSIGSVYLFIGLAVLSFVLYIAFGRYGNVTLGKASDKPEFNNFSWAAMLFCAGIGSDILYWGVIEWAFYYQVPPNGAKGMTDEALTYATQYGMFHWGPIAWAIYVLPALPIGYLVFVKKQPVYKISQACRPVLKGQTDKFLGKLVDILFIFGLLGGAATSLALGVPLISSGIERLTGIDGDNMVIRSIILFTITVIFAISSYTGLKKGIQKLSDINVWLSFLLLAFVFIVGPTIFIMETTLTGFGNMMRDFFHMATWMEPFGGIRNRKETNFPQDWTIFYWSWWLVYAPFIGLFIARISKGRRLKEVILGTIAYGTLGCVLFFGIFGNYAVYLQISGQFNVVDFLNKHSTEATIIEVMHQLPMGSLIIVLFLISAFLFLATTFDSGSYILAAASQKKVIGEPLKANRLFWAFALCLLPFSLMLVGGERALEVLKTASLLASVPLLFIFTFMMISFIITLNKDRIKLETRADKLKEVERRSLRIVQVKSDPEDDNL persistent 540 BCCT family transporter WP_019835179.1 UPI0002EE9865 UniRef100_A0A974QP73,UniRef50_B9DJU7,UniRef90_A0A974QP73 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 65555 66109 . - . GCA_005502385.1_00173_gene GCA_005502385.1_00173 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSNSYNINQKIEEAKDLVINSIGETMDLYGTNRSVGNLYGTMVFEGSMTLDEMREHLQMSKPSMSAGVKKLQEYDIVKQQFTRGSRKQHFIAEKDFFNFFRNFFTQKWEREIDTNLEATNKAENILQNIIQTNNLSEEEKEKIDSIQSQLNHTKLYYKWLENLSSAIESGDIFEHYPIPKEEDL . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 65555 66109 . - . GCA_005502385.1_00173_mRNA GCA_005502385.1_00173 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSNSYNINQKIEEAKDLVINSIGETMDLYGTNRSVGNLYGTMVFEGSMTLDEMREHLQMSKPSMSAGVKKLQEYDIVKQQFTRGSRKQHFIAEKDFFNFFRNFFTQKWEREIDTNLEATNKAENILQNIIQTNNLSEEEKEKIDSIQSQLNHTKLYYKWLENLSSAIESGDIFEHYPIPKEEDL . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 65555 66109 . - 0 GCA_005502385.1_00173 GCA_005502385.1_00173_gene,GCA_005502385.1_00173_mRNA GCA_005502385.1_00173 HTH-type transcriptional repressor OpcR GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSNSYNINQKIEEAKDLVINSIGETMDLYGTNRSVGNLYGTMVFEGSMTLDEMREHLQMSKPSMSAGVKKLQEYDIVKQQFTRGSRKQHFIAEKDFFNFFRNFFTQKWEREIDTNLEATNKAENILQNIIQTNNLSEEEKEKIDSIQSQLNHTKLYYKWLENLSSAIESGDIFEHYPIPKEEDL persistent 184 cudC choline uptake/conversion transcriptional regulator CudC WP_049414265.1 UPI00066D4408 UniRef100_UPI00066D4408,UniRef50_P71015,UniRef90_A0A4Q9WU58 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 66348 67838 . + . GCA_005502385.1_00174_gene GCA_005502385.1_00174 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MELVKALSNRQYINGEWVESANKNTRDIINPYNQEVIFTVTEGTKEDAEQAILAARRSFENGEWSQETSEVRGKKVRAIADKITENRDELAKLETLDTGKTLEESYADMDDIANVFNYFAGLADKDGGEIIDSPIPNTESKLVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGVINLILSSGEEVGDTLSGHKEVDLVSFTGGIETGKHIMKNAANHVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVHNDIKDKFEKALIERVGKIKLGNGFDSDTEMGPVISPEHRDKIEKYMKVAKDDGATIAIGGKRPDDEDLKDGLFFEPTVITNCNTHMRIVQEEVFGPVVTVEGFDNEEEAIALANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLISKHILTNRNPEPVNFFSK . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 66348 67838 . + . GCA_005502385.1_00174_mRNA GCA_005502385.1_00174 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MELVKALSNRQYINGEWVESANKNTRDIINPYNQEVIFTVTEGTKEDAEQAILAARRSFENGEWSQETSEVRGKKVRAIADKITENRDELAKLETLDTGKTLEESYADMDDIANVFNYFAGLADKDGGEIIDSPIPNTESKLVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGVINLILSSGEEVGDTLSGHKEVDLVSFTGGIETGKHIMKNAANHVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVHNDIKDKFEKALIERVGKIKLGNGFDSDTEMGPVISPEHRDKIEKYMKVAKDDGATIAIGGKRPDDEDLKDGLFFEPTVITNCNTHMRIVQEEVFGPVVTVEGFDNEEEAIALANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLISKHILTNRNPEPVNFFSK . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 66348 67838 . + 0 GCA_005502385.1_00174 GCA_005502385.1_00174_gene,GCA_005502385.1_00174_mRNA GCA_005502385.1_00174 Betaine aldehyde dehydrogenase GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MELVKALSNRQYINGEWVESANKNTRDIINPYNQEVIFTVTEGTKEDAEQAILAARRSFENGEWSQETSEVRGKKVRAIADKITENRDELAKLETLDTGKTLEESYADMDDIANVFNYFAGLADKDGGEIIDSPIPNTESKLVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGVINLILSSGEEVGDTLSGHKEVDLVSFTGGIETGKHIMKNAANHVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVHNDIKDKFEKALIERVGKIKLGNGFDSDTEMGPVISPEHRDKIEKYMKVAKDDGATIAIGGKRPDDEDLKDGLFFEPTVITNCNTHMRIVQEEVFGPVVTVEGFDNEEEAIALANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLISKHILTNRNPEPVNFFSK persistent 496 betB betaine-aldehyde dehydrogenase 1.2.1.8 GO:0008802,GO:0019285,GO:0046872 COG1012,I WP_049414267.1 UPI00066C5D06 UniRef100_UPI00066C5D06,UniRef50_P71016,UniRef90_Q4L9D8 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 67975 69681 . + . GCA_005502385.1_00175_gene GCA_005502385.1_00175 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSKNQSYDYVIIGGGSAGSVLGNRLSEDKNKEVLVLEAGRSDYPWDLFIQMPAALMFPSGNPFYDWRYQTEEEPHMGRKVDHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMETWDFAHCLPYFKKLEKTFGAAPYDKYRGHDGPIKLKRGPATNPLFKSFFDAGVEAGYHKTNDVNGYRQEGFGPFDSQVHNGRRVSASRAYLRPAMKRKNLTVKTRAFVTKIHFEGKKATGVTFKRNGKLHTVNAGEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPRMHLPGVGENFEDHLEVYIQHKCKQPVSLQPSLDVKRMPWIGLQWIFARKGAAASNHFEGGAFVRSNNQVAYPNLMFHFLPIAVRYDGQKAPVAHGYQVHVGPMYSNSRGSLKIKSKDPFEKPSIVFNYLSTKEDKQEWVEAIRVARNILSQPAMDPYNGGEISPGPSVQTDEEILDWVRKDGETALHPSCSAKMGPASDPMAVVDPLTMKVHGMENLRVVDASAMPRTTNGNIHAPVLMLAEKAADIIRGKKPLEPQYVDYYKHGVSDENAGAMEFDPYYKH . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 67975 69681 . + . GCA_005502385.1_00175_mRNA GCA_005502385.1_00175 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSKNQSYDYVIIGGGSAGSVLGNRLSEDKNKEVLVLEAGRSDYPWDLFIQMPAALMFPSGNPFYDWRYQTEEEPHMGRKVDHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMETWDFAHCLPYFKKLEKTFGAAPYDKYRGHDGPIKLKRGPATNPLFKSFFDAGVEAGYHKTNDVNGYRQEGFGPFDSQVHNGRRVSASRAYLRPAMKRKNLTVKTRAFVTKIHFEGKKATGVTFKRNGKLHTVNAGEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPRMHLPGVGENFEDHLEVYIQHKCKQPVSLQPSLDVKRMPWIGLQWIFARKGAAASNHFEGGAFVRSNNQVAYPNLMFHFLPIAVRYDGQKAPVAHGYQVHVGPMYSNSRGSLKIKSKDPFEKPSIVFNYLSTKEDKQEWVEAIRVARNILSQPAMDPYNGGEISPGPSVQTDEEILDWVRKDGETALHPSCSAKMGPASDPMAVVDPLTMKVHGMENLRVVDASAMPRTTNGNIHAPVLMLAEKAADIIRGKKPLEPQYVDYYKHGVSDENAGAMEFDPYYKH . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 67975 69681 . + 0 GCA_005502385.1_00175 GCA_005502385.1_00175_gene,GCA_005502385.1_00175_mRNA GCA_005502385.1_00175 Oxygen-dependent choline dehydrogenase GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MSKNQSYDYVIIGGGSAGSVLGNRLSEDKNKEVLVLEAGRSDYPWDLFIQMPAALMFPSGNPFYDWRYQTEEEPHMGRKVDHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMETWDFAHCLPYFKKLEKTFGAAPYDKYRGHDGPIKLKRGPATNPLFKSFFDAGVEAGYHKTNDVNGYRQEGFGPFDSQVHNGRRVSASRAYLRPAMKRKNLTVKTRAFVTKIHFEGKKATGVTFKRNGKLHTVNAGEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPRMHLPGVGENFEDHLEVYIQHKCKQPVSLQPSLDVKRMPWIGLQWIFARKGAAASNHFEGGAFVRSNNQVAYPNLMFHFLPIAVRYDGQKAPVAHGYQVHVGPMYSNSRGSLKIKSKDPFEKPSIVFNYLSTKEDKQEWVEAIRVARNILSQPAMDPYNGGEISPGPSVQTDEEILDWVRKDGETALHPSCSAKMGPASDPMAVVDPLTMKVHGMENLRVVDASAMPRTTNGNIHAPVLMLAEKAADIIRGKKPLEPQYVDYYKHGVSDENAGAMEFDPYYKH persistent 568 betA choline dehydrogenase 1.1.99.1 GO:0008802,GO:0008812,GO:0016020,GO:0019285,GO:0050660 COG2303,IR WP_002449442.1 UPI00019FC481 UniRef100_UPI00019FC481,UniRef50_Q9X2M2,UniRef90_Q8NUM0 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 69856 70992 . + . GCA_005502385.1_00176_gene GCA_005502385.1_00176 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MIEVRRHLHEYPELSFHETETPKYIANFYKDKDCKVETNIGQHGVKVTIDSGKPGKTIAIRADFDALPIQEDTGLSFVSKNEGVMHACGHDAHTAYMLILAETLIEMKSQFSGKVIVIHQPAEEMPPGGAKGMIEDGVLDGVDHVLGTHVMTNMAPGKVYYHKGNVQTGRSYFKLIVKGEGGHGSSPHTANDAIVAGAHFVTTAQTVVSRRLNPFETGVVTIGSFDGKGQFNVIKDKITIEGDVRALTDATRDRIETALKQIVHGLEETFGVNCEFTFSKDYPALYNDPDFTEYVAETIKQAKLADVKGVEICEPQPPSEDFAFYAKTLPSTFIYSGAKPRKGKAYPHHHPKFTIDESSMLVAAEAVGAVVLNYLTIE . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 69856 70992 . + . GCA_005502385.1_00176_mRNA GCA_005502385.1_00176 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MIEVRRHLHEYPELSFHETETPKYIANFYKDKDCKVETNIGQHGVKVTIDSGKPGKTIAIRADFDALPIQEDTGLSFVSKNEGVMHACGHDAHTAYMLILAETLIEMKSQFSGKVIVIHQPAEEMPPGGAKGMIEDGVLDGVDHVLGTHVMTNMAPGKVYYHKGNVQTGRSYFKLIVKGEGGHGSSPHTANDAIVAGAHFVTTAQTVVSRRLNPFETGVVTIGSFDGKGQFNVIKDKITIEGDVRALTDATRDRIETALKQIVHGLEETFGVNCEFTFSKDYPALYNDPDFTEYVAETIKQAKLADVKGVEICEPQPPSEDFAFYAKTLPSTFIYSGAKPRKGKAYPHHHPKFTIDESSMLVAAEAVGAVVLNYLTIE . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 69856 70992 . + 0 GCA_005502385.1_00176 GCA_005502385.1_00176_gene,GCA_005502385.1_00176_mRNA GCA_005502385.1_00176 N-acetylcysteine deacetylase GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MIEVRRHLHEYPELSFHETETPKYIANFYKDKDCKVETNIGQHGVKVTIDSGKPGKTIAIRADFDALPIQEDTGLSFVSKNEGVMHACGHDAHTAYMLILAETLIEMKSQFSGKVIVIHQPAEEMPPGGAKGMIEDGVLDGVDHVLGTHVMTNMAPGKVYYHKGNVQTGRSYFKLIVKGEGGHGSSPHTANDAIVAGAHFVTTAQTVVSRRLNPFETGVVTIGSFDGKGQFNVIKDKITIEGDVRALTDATRDRIETALKQIVHGLEETFGVNCEFTFSKDYPALYNDPDFTEYVAETIKQAKLADVKGVEICEPQPPSEDFAFYAKTLPSTFIYSGAKPRKGKAYPHHHPKFTIDESSMLVAAEAVGAVVLNYLTIE persistent 378 Amidohydrolase UniRef50_A0A1W7A8D6,UniRef90_A0A3S7GVC2 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 71136 71324 . + . GCA_005502385.1_00177_gene GCA_005502385.1_00177 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MQGFIDDKTPLGELASWINQDQDFPKHEYLAENILDYFSKMSMLDHEFLEIVKRSLSLYEKR . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 71136 71324 . + . GCA_005502385.1_00177_mRNA GCA_005502385.1_00177 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MQGFIDDKTPLGELASWINQDQDFPKHEYLAENILDYFSKMSMLDHEFLEIVKRSLSLYEKR . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 71136 71324 . + 0 GCA_005502385.1_00177 GCA_005502385.1_00177_gene,GCA_005502385.1_00177_mRNA GCA_005502385.1_00177 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MQGFIDDKTPLGELASWINQDQDFPKHEYLAENILDYFSKMSMLDHEFLEIVKRSLSLYEKR persistent 62 yozE YozE SAM-like domain-containing protein UniRef50_A0A1J3ZUB2,UniRef90_A0A974KYF8 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 71388 71870 . + . GCA_005502385.1_00178_gene GCA_005502385.1_00178 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTLTDNYKTYVIEEKEDQTMSIEKNNDVQLYTVLESINELTNDSMCVLNHLFVNEGNEPQFESKFLKRTKYLQDVPGFKALRFLRPQTKHRHYIILTLWKDRQSFYDWQSSDAYGKTHKKRGTKQGVDNKIVNRDLSYNVRIELANLETSIDIDNIFNIQ . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 71388 71870 . + . GCA_005502385.1_00178_mRNA GCA_005502385.1_00178 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTLTDNYKTYVIEEKEDQTMSIEKNNDVQLYTVLESINELTNDSMCVLNHLFVNEGNEPQFESKFLKRTKYLQDVPGFKALRFLRPQTKHRHYIILTLWKDRQSFYDWQSSDAYGKTHKKRGTKQGVDNKIVNRDLSYNVRIELANLETSIDIDNIFNIQ . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 71388 71870 . + 0 GCA_005502385.1_00178 GCA_005502385.1_00178_gene,GCA_005502385.1_00178_mRNA GCA_005502385.1_00178 Heme-degrading monooxygenase HmoB GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTLTDNYKTYVIEEKEDQTMSIEKNNDVQLYTVLESINELTNDSMCVLNHLFVNEGNEPQFESKFLKRTKYLQDVPGFKALRFLRPQTKHRHYIILTLWKDRQSFYDWQSSDAYGKTHKKRGTKQGVDNKIVNRDLSYNVRIELANLETSIDIDNIFNIQ persistent 160 Signal transduction protein TRAP WP_070443101.1 UPI0008A12DA4 UniRef100_UPI0008A12DA4,UniRef50_A0A2T4SS92,UniRef90_A0A3S7GZB0 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 72014 73606 . + . GCA_005502385.1_00179_gene GCA_005502385.1_00179 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNHLNLLAPETYNIVSEIEKHASNQNKQAIIYENGVEEPISVTYSELIKNANKVGHVLLNHGLKKGDKVLIMMPRAIITYELYIAALKLGIAIIPSSEMLRTKDLQYRITHGEINAVIALADFIEEFRDIKEYHELTKFVINGNEENWISIEEEKVKQSDELDTANTTRDDVAILSYTSGTTGNPKAVTHSHGWGYAHMKMAPEHWLAIKEDDLVWATAAPGWQKWVWSPFLSIMGSGATAFVYNGKFNPSRYLSLLQKFKINVLCCTPTEYRMMAKLDNLDKYNLDHLHSAVSAGEPLNREVVEQFRKHFNLTVRDGYGQTESTLLIGFLKDTEQRPGSMGKAIPGSRVAVVDDEGNKVDTNVKGNIALPLDFPGLFKGYFKDEKRTKDTHAGDYYITGDLAHIDEDGYFWFEGRRDDIIISSGYTIGPFEVEDALTNHEAVKECAVVASPHPIRGNIVKAFIILKEGYKPSDDLVKELQTFSKKVVAPYKYPRAIEFVEDLPKTNSGKIRRVELREAERTKHNNAQNK . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 72014 73606 . + . GCA_005502385.1_00179_mRNA GCA_005502385.1_00179 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNHLNLLAPETYNIVSEIEKHASNQNKQAIIYENGVEEPISVTYSELIKNANKVGHVLLNHGLKKGDKVLIMMPRAIITYELYIAALKLGIAIIPSSEMLRTKDLQYRITHGEINAVIALADFIEEFRDIKEYHELTKFVINGNEENWISIEEEKVKQSDELDTANTTRDDVAILSYTSGTTGNPKAVTHSHGWGYAHMKMAPEHWLAIKEDDLVWATAAPGWQKWVWSPFLSIMGSGATAFVYNGKFNPSRYLSLLQKFKINVLCCTPTEYRMMAKLDNLDKYNLDHLHSAVSAGEPLNREVVEQFRKHFNLTVRDGYGQTESTLLIGFLKDTEQRPGSMGKAIPGSRVAVVDDEGNKVDTNVKGNIALPLDFPGLFKGYFKDEKRTKDTHAGDYYITGDLAHIDEDGYFWFEGRRDDIIISSGYTIGPFEVEDALTNHEAVKECAVVASPHPIRGNIVKAFIILKEGYKPSDDLVKELQTFSKKVVAPYKYPRAIEFVEDLPKTNSGKIRRVELREAERTKHNNAQNK . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 72014 73606 . + 0 GCA_005502385.1_00179 GCA_005502385.1_00179_gene,GCA_005502385.1_00179_mRNA GCA_005502385.1_00179 Acetyl-coenzyme A synthetase GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNHLNLLAPETYNIVSEIEKHASNQNKQAIIYENGVEEPISVTYSELIKNANKVGHVLLNHGLKKGDKVLIMMPRAIITYELYIAALKLGIAIIPSSEMLRTKDLQYRITHGEINAVIALADFIEEFRDIKEYHELTKFVINGNEENWISIEEEKVKQSDELDTANTTRDDVAILSYTSGTTGNPKAVTHSHGWGYAHMKMAPEHWLAIKEDDLVWATAAPGWQKWVWSPFLSIMGSGATAFVYNGKFNPSRYLSLLQKFKINVLCCTPTEYRMMAKLDNLDKYNLDHLHSAVSAGEPLNREVVEQFRKHFNLTVRDGYGQTESTLLIGFLKDTEQRPGSMGKAIPGSRVAVVDDEGNKVDTNVKGNIALPLDFPGLFKGYFKDEKRTKDTHAGDYYITGDLAHIDEDGYFWFEGRRDDIIISSGYTIGPFEVEDALTNHEAVKECAVVASPHPIRGNIVKAFIILKEGYKPSDDLVKELQTFSKKVVAPYKYPRAIEFVEDLPKTNSGKIRRVELREAERTKHNNAQNK persistent 530 mbcS acyl-CoA synthetase MbcS WP_137689729.1 UPI0010F5A03F UniRef100_UPI0010F5A03F,UniRef50_C0SPB0,UniRef90_A0A3S7GVL1 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 73820 76444 . + . GCA_005502385.1_00180_gene GCA_005502385.1_00180 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTKYIYAFDEGQKSMRDLLGGKGANLSEMKRLGLPVPDGFTITTTACIEYLKQGKSLSTEIKTELIDHLASFSERTGKIFSSDTNLLLVSVRSGAKISMPGMMDTILNLGLNDENVEKLAEKTGDKRFAYDCYRRLLQMFGEVVYSVPMQAFDTYFEQYKKQHHFENDAAISADGLKEICKRFKEIYVEEVHQPFPQEPLKQLEEAIEAVFKSWDNDRARIYRDLNDIPHDIGTAVNIQEMVFGNSGDNSGTGVAFTRNPVTGENKLFGEYLLNAQGEDVVAGIRTPKDISTLHDQMPEVHQEFVDVTKQLEKHYKDMQDIEFTIENGQLYLLQTRNGKRTARAAIQIAVDLVNEDIITKKEAMKKVEVKSIDQLLHPNFDESSLKEATVVSKMGLPASPGAATGQIVFTAEEAKAQSEQGKKVILMRPETSPEDIEGMIASEAIVTTHGGMTSHAAVVARGMGKCCVTGCSDLEINTSAKTVYYGDQTLHEGDMVSVDGSEGDIYLGEIKTVNAEHSESFNQFMEWSEKTARLKVRMNAETPQDIKVGYQFGAKGIGLVRTEHMFFGAERLVEMRRFILSSSREDRLEALNHIKQYQVEDFKEIFKLSGEHPTIVRLLDPPLHEFLPHSEEDIANVAKQLNIPKETLDKRIVDLNEVNPMLGHRGCRLAITYPELYEMQVEAIIESVFKLKEEGIQCKPEIMIPLVSTVEEFTTLKENLVKTITQLEKQHQKSVDYLMGTMIETPRACLISDELAKHCDFFSFGTNDLTQLSFGFSRDDAGKFINVYTERNILKLDPFQTLDKDGVGKLIEVAVKQAKKVNENIKIGVCGELGGDAKSIHYFNHLSIDYVSCSPFRIPGAILATAQSQVEESE . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 73820 76444 . + . GCA_005502385.1_00180_mRNA GCA_005502385.1_00180 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTKYIYAFDEGQKSMRDLLGGKGANLSEMKRLGLPVPDGFTITTTACIEYLKQGKSLSTEIKTELIDHLASFSERTGKIFSSDTNLLLVSVRSGAKISMPGMMDTILNLGLNDENVEKLAEKTGDKRFAYDCYRRLLQMFGEVVYSVPMQAFDTYFEQYKKQHHFENDAAISADGLKEICKRFKEIYVEEVHQPFPQEPLKQLEEAIEAVFKSWDNDRARIYRDLNDIPHDIGTAVNIQEMVFGNSGDNSGTGVAFTRNPVTGENKLFGEYLLNAQGEDVVAGIRTPKDISTLHDQMPEVHQEFVDVTKQLEKHYKDMQDIEFTIENGQLYLLQTRNGKRTARAAIQIAVDLVNEDIITKKEAMKKVEVKSIDQLLHPNFDESSLKEATVVSKMGLPASPGAATGQIVFTAEEAKAQSEQGKKVILMRPETSPEDIEGMIASEAIVTTHGGMTSHAAVVARGMGKCCVTGCSDLEINTSAKTVYYGDQTLHEGDMVSVDGSEGDIYLGEIKTVNAEHSESFNQFMEWSEKTARLKVRMNAETPQDIKVGYQFGAKGIGLVRTEHMFFGAERLVEMRRFILSSSREDRLEALNHIKQYQVEDFKEIFKLSGEHPTIVRLLDPPLHEFLPHSEEDIANVAKQLNIPKETLDKRIVDLNEVNPMLGHRGCRLAITYPELYEMQVEAIIESVFKLKEEGIQCKPEIMIPLVSTVEEFTTLKENLVKTITQLEKQHQKSVDYLMGTMIETPRACLISDELAKHCDFFSFGTNDLTQLSFGFSRDDAGKFINVYTERNILKLDPFQTLDKDGVGKLIEVAVKQAKKVNENIKIGVCGELGGDAKSIHYFNHLSIDYVSCSPFRIPGAILATAQSQVEESE . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 73820 76444 . + 0 GCA_005502385.1_00180 GCA_005502385.1_00180_gene,GCA_005502385.1_00180_mRNA GCA_005502385.1_00180 Pyruvate%2C phosphate dikinase GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTKYIYAFDEGQKSMRDLLGGKGANLSEMKRLGLPVPDGFTITTTACIEYLKQGKSLSTEIKTELIDHLASFSERTGKIFSSDTNLLLVSVRSGAKISMPGMMDTILNLGLNDENVEKLAEKTGDKRFAYDCYRRLLQMFGEVVYSVPMQAFDTYFEQYKKQHHFENDAAISADGLKEICKRFKEIYVEEVHQPFPQEPLKQLEEAIEAVFKSWDNDRARIYRDLNDIPHDIGTAVNIQEMVFGNSGDNSGTGVAFTRNPVTGENKLFGEYLLNAQGEDVVAGIRTPKDISTLHDQMPEVHQEFVDVTKQLEKHYKDMQDIEFTIENGQLYLLQTRNGKRTARAAIQIAVDLVNEDIITKKEAMKKVEVKSIDQLLHPNFDESSLKEATVVSKMGLPASPGAATGQIVFTAEEAKAQSEQGKKVILMRPETSPEDIEGMIASEAIVTTHGGMTSHAAVVARGMGKCCVTGCSDLEINTSAKTVYYGDQTLHEGDMVSVDGSEGDIYLGEIKTVNAEHSESFNQFMEWSEKTARLKVRMNAETPQDIKVGYQFGAKGIGLVRTEHMFFGAERLVEMRRFILSSSREDRLEALNHIKQYQVEDFKEIFKLSGEHPTIVRLLDPPLHEFLPHSEEDIANVAKQLNIPKETLDKRIVDLNEVNPMLGHRGCRLAITYPELYEMQVEAIIESVFKLKEEGIQCKPEIMIPLVSTVEEFTTLKENLVKTITQLEKQHQKSVDYLMGTMIETPRACLISDELAKHCDFFSFGTNDLTQLSFGFSRDDAGKFINVYTERNILKLDPFQTLDKDGVGKLIEVAVKQAKKVNENIKIGVCGELGGDAKSIHYFNHLSIDYVSCSPFRIPGAILATAQSQVEESE persistent 874 ppdK pyruvate, phosphate dikinase 2.7.9.1 GO:0006090,GO:0050242 WP_002454797.1 UPI0001EF518B UniRef100_UPI0001EF518B,UniRef50_A0AAJ1Q703,UniRef90_A0A3S7GW08 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 76451 77281 . + . GCA_005502385.1_00181_gene GCA_005502385.1_00181 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNEVESQAHNLKLFIVSDSIGETAQRMIHATLTQFPDLNNVEIKKFPYIKDEEEFLNILNLAKEHNAIVATTLVSESFNALGHEFAREHDIPYVDYMSDLISIVEHVTGEKPLMESGALRKLNEAYFKRIEAIEYSVKYDDGKHFSDIGEADALIVGVSRTSKTPLSMYLANKGYKIANIPLVPEVSIPDSVFKQKGLQVFGLTASPQYIANIRKSRAETLGLSKASQYNNLNRIKEELSYAEEVFKKLNATVINTEYKSIEESAFYIEKFLQNNK . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 76451 77281 . + . GCA_005502385.1_00181_mRNA GCA_005502385.1_00181 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNEVESQAHNLKLFIVSDSIGETAQRMIHATLTQFPDLNNVEIKKFPYIKDEEEFLNILNLAKEHNAIVATTLVSESFNALGHEFAREHDIPYVDYMSDLISIVEHVTGEKPLMESGALRKLNEAYFKRIEAIEYSVKYDDGKHFSDIGEADALIVGVSRTSKTPLSMYLANKGYKIANIPLVPEVSIPDSVFKQKGLQVFGLTASPQYIANIRKSRAETLGLSKASQYNNLNRIKEELSYAEEVFKKLNATVINTEYKSIEESAFYIEKFLQNNK . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 76451 77281 . + 0 GCA_005502385.1_00181 GCA_005502385.1_00181_gene,GCA_005502385.1_00181_mRNA GCA_005502385.1_00181 Putative pyruvate%2C phosphate dikinase regulatory protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNEVESQAHNLKLFIVSDSIGETAQRMIHATLTQFPDLNNVEIKKFPYIKDEEEFLNILNLAKEHNAIVATTLVSESFNALGHEFAREHDIPYVDYMSDLISIVEHVTGEKPLMESGALRKLNEAYFKRIEAIEYSVKYDDGKHFSDIGEADALIVGVSRTSKTPLSMYLANKGYKIANIPLVPEVSIPDSVFKQKGLQVFGLTASPQYIANIRKSRAETLGLSKASQYNNLNRIKEELSYAEEVFKKLNATVINTEYKSIEESAFYIEKFLQNNK persistent 276 Putative pyruvate, phosphate dikinase regulatory protein WP_002449455.1 UPI00019FC47A UniRef100_UPI00019FC47A,UniRef50_Q4A0R6,UniRef90_A0A4V2KX77 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 77602 79104 . + . GCA_005502385.1_00182_gene GCA_005502385.1_00182 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTESKDMIIVGAGVISTTVASMFNELVPNWNIDLYERLDRPGIESSNERNNAGTGHAALCELNYTVRQPDGTIDIEKAKEINEQFEISKQFWGHLVESGQIKDPRDFIHPLPHISFVRGKNNVQFLKERYEKMKDFPMFDDIEYTEDIEVMRKWIPLMMQGRFDDGLMAASKIDEGTDVNYGELTRKMAHNLQNDDSNVNVNYNHEVQDFKRLSNGKWQVKIKDLANNKVFTKEADHVFIGAGGGSIPLLQKTGIEEGKHIGGFPIIGQFIACTNPEVIEQHDAKVYGKEPPGTPPMTVPHLDTRYIDGERTLLFGPFANVGPKFLIHGSNLDLFKSVKPHNITTLLAAAVKNMSLLKYSFDQIIMTKEGCMNHLRTFYPEARDEDWQVYTAGTRVQVIKDDEKEGKGFIQFGTEVVDSKDHSIIALLGESPGASTSVSVALEVIERNFEQYLDEWKPKIKKMIPSYGESLIHDVDLMRKTRRLTSKQLELGFYENTNAK . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 77602 79104 . + . GCA_005502385.1_00182_mRNA GCA_005502385.1_00182 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTESKDMIIVGAGVISTTVASMFNELVPNWNIDLYERLDRPGIESSNERNNAGTGHAALCELNYTVRQPDGTIDIEKAKEINEQFEISKQFWGHLVESGQIKDPRDFIHPLPHISFVRGKNNVQFLKERYEKMKDFPMFDDIEYTEDIEVMRKWIPLMMQGRFDDGLMAASKIDEGTDVNYGELTRKMAHNLQNDDSNVNVNYNHEVQDFKRLSNGKWQVKIKDLANNKVFTKEADHVFIGAGGGSIPLLQKTGIEEGKHIGGFPIIGQFIACTNPEVIEQHDAKVYGKEPPGTPPMTVPHLDTRYIDGERTLLFGPFANVGPKFLIHGSNLDLFKSVKPHNITTLLAAAVKNMSLLKYSFDQIIMTKEGCMNHLRTFYPEARDEDWQVYTAGTRVQVIKDDEKEGKGFIQFGTEVVDSKDHSIIALLGESPGASTSVSVALEVIERNFEQYLDEWKPKIKKMIPSYGESLIHDVDLMRKTRRLTSKQLELGFYENTNAK . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 77602 79104 . + 0 GCA_005502385.1_00182 GCA_005502385.1_00182_gene,GCA_005502385.1_00182_mRNA GCA_005502385.1_00182 putative malate:quinone oxidoreductase 2 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MTESKDMIIVGAGVISTTVASMFNELVPNWNIDLYERLDRPGIESSNERNNAGTGHAALCELNYTVRQPDGTIDIEKAKEINEQFEISKQFWGHLVESGQIKDPRDFIHPLPHISFVRGKNNVQFLKERYEKMKDFPMFDDIEYTEDIEVMRKWIPLMMQGRFDDGLMAASKIDEGTDVNYGELTRKMAHNLQNDDSNVNVNYNHEVQDFKRLSNGKWQVKIKDLANNKVFTKEADHVFIGAGGGSIPLLQKTGIEEGKHIGGFPIIGQFIACTNPEVIEQHDAKVYGKEPPGTPPMTVPHLDTRYIDGERTLLFGPFANVGPKFLIHGSNLDLFKSVKPHNITTLLAAAVKNMSLLKYSFDQIIMTKEGCMNHLRTFYPEARDEDWQVYTAGTRVQVIKDDEKEGKGFIQFGTEVVDSKDHSIIALLGESPGASTSVSVALEVIERNFEQYLDEWKPKIKKMIPSYGESLIHDVDLMRKTRRLTSKQLELGFYENTNAK persistent 500 lqo L-lactate dehydrogenase (quinone) 1.1.5.-,1.1.5.4 WP_002449218.1 UPI00019FC479 UniRef100_A0A4Q9WRC9,UniRef50_O69282,UniRef90_A0A4Q9WRC9 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 79246 80136 . - . GCA_005502385.1_00183_gene GCA_005502385.1_00183 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNKEQLEKVSHGKGFIAALDQSGGSTPKALKEYGVNEDQYSNDDEMFQLVHDMRTRVVTSPSFTSDKILGAILFEQTMDREVEGKYTGDYLADKGVVPFLKVDKGLAEEQNGVQLMKPIDNLDETLDRAVERHIFGTKMRSNILELNEQGIKDVVEQQFEIAKKIIAKGLVPIIEPEVNINAKDKAEIEEVLKAELKKGLDSLNDDQLVMLKLTIPTKANLYKELADHPNVVRVVVLSGGYSRDEANKLLKDNDELIASFSRALASDLRAGQSKEEFDKALGDAVDSIYDASVNKN . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 79246 80136 . - . GCA_005502385.1_00183_mRNA GCA_005502385.1_00183 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNKEQLEKVSHGKGFIAALDQSGGSTPKALKEYGVNEDQYSNDDEMFQLVHDMRTRVVTSPSFTSDKILGAILFEQTMDREVEGKYTGDYLADKGVVPFLKVDKGLAEEQNGVQLMKPIDNLDETLDRAVERHIFGTKMRSNILELNEQGIKDVVEQQFEIAKKIIAKGLVPIIEPEVNINAKDKAEIEEVLKAELKKGLDSLNDDQLVMLKLTIPTKANLYKELADHPNVVRVVVLSGGYSRDEANKLLKDNDELIASFSRALASDLRAGQSKEEFDKALGDAVDSIYDASVNKN . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 79246 80136 . - 0 GCA_005502385.1_00183 GCA_005502385.1_00183_gene,GCA_005502385.1_00183_mRNA GCA_005502385.1_00183 Fructose-bisphosphate aldolase class 1 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MNKEQLEKVSHGKGFIAALDQSGGSTPKALKEYGVNEDQYSNDDEMFQLVHDMRTRVVTSPSFTSDKILGAILFEQTMDREVEGKYTGDYLADKGVVPFLKVDKGLAEEQNGVQLMKPIDNLDETLDRAVERHIFGTKMRSNILELNEQGIKDVVEQQFEIAKKIIAKGLVPIIEPEVNINAKDKAEIEEVLKAELKKGLDSLNDDQLVMLKLTIPTKANLYKELADHPNVVRVVVLSGGYSRDEANKLLKDNDELIASFSRALASDLRAGQSKEEFDKALGDAVDSIYDASVNKN persistent 296 fda fructose bisphosphate aldolase 4.1.2.13 GO:0004332,GO:0006096 COG3588,G WP_002449395.1 UPI00019FC478 UniRef100_A0A1L8Y9B9,UniRef50_Q8CMY5,UniRef90_Q8CMY5 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 80314 80805 . + . GCA_005502385.1_00184_gene GCA_005502385.1_00184 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKQRILIIGSPGSGKSTLAYQLHLKYQLPLYHIDQIQWLNNKNVITFEELKQKLESIVVKEEWIIDGNYSSTLSMRLKYATKVIWIKEPKVKCIFRVIKRYIYSLFKREHIGGNPKTLSFEFIKYIWDFPKNNEQFIMQQMKRSIPNVQWIIDDSKALSLRFL . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 80314 80805 . + . GCA_005502385.1_00184_mRNA GCA_005502385.1_00184 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKQRILIIGSPGSGKSTLAYQLHLKYQLPLYHIDQIQWLNNKNVITFEELKQKLESIVVKEEWIIDGNYSSTLSMRLKYATKVIWIKEPKVKCIFRVIKRYIYSLFKREHIGGNPKTLSFEFIKYIWDFPKNNEQFIMQQMKRSIPNVQWIIDDSKALSLRFL . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 80314 80805 . + 0 GCA_005502385.1_00184 GCA_005502385.1_00184_gene,GCA_005502385.1_00184_mRNA GCA_005502385.1_00184 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKQRILIIGSPGSGKSTLAYQLHLKYQLPLYHIDQIQWLNNKNVITFEELKQKLESIVVKEEWIIDGNYSSTLSMRLKYATKVIWIKEPKVKCIFRVIKRYIYSLFKREHIGGNPKTLSFEFIKYIWDFPKNNEQFIMQQMKRSIPNVQWIIDDSKALSLRFL persistent 163 Topology modulation protein WP_002449448.1 UPI00019FC477 UniRef100_UPI00019FC477,UniRef50_Q4L9B5,UniRef90_A0A4Q9WQH2 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 81021 82355 . + . GCA_005502385.1_00185_gene GCA_005502385.1_00185 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKNKIFAVLTTSALLLAACSNGDNASDSKQKDGNQKNEQSSNKSGNSQSDALKKNNDKNTNENKVDYPKDGVKGIYVTSNSTQGKKMDELVKFIKDSNLNTMVIDVKDDTGNITMKLNTGNKQVDKNTLDIVDGKKLLKKLHDNNIYPIARIVTFKDTKLANEHPEWTFKNSDGSVWTNGKGDSFVNPFMKEVWKYDIDVAKAAAKAGFQDIQFDYVRFPEGFENQADSLTYNKGEYKNSQMSSGDQRVDTITKFLEYANKELKPMGVNVSADVFGYSALVENAPGIGQSFPKISKNVDAISSMIYPSHWSNGDFGLQAPDTEPYKTVNRYIQKENSLLDTLGKDKPISRPWIQDFTASYLGAGNYIDYDTRAISEEVQALKDNGVNEFLLWNAGNDYTEGVNYNPKKGNAKEQDPEGAEQTNNKDDQHSDSQDNEQADNKNK . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 81021 82355 . + . GCA_005502385.1_00185_mRNA GCA_005502385.1_00185 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKNKIFAVLTTSALLLAACSNGDNASDSKQKDGNQKNEQSSNKSGNSQSDALKKNNDKNTNENKVDYPKDGVKGIYVTSNSTQGKKMDELVKFIKDSNLNTMVIDVKDDTGNITMKLNTGNKQVDKNTLDIVDGKKLLKKLHDNNIYPIARIVTFKDTKLANEHPEWTFKNSDGSVWTNGKGDSFVNPFMKEVWKYDIDVAKAAAKAGFQDIQFDYVRFPEGFENQADSLTYNKGEYKNSQMSSGDQRVDTITKFLEYANKELKPMGVNVSADVFGYSALVENAPGIGQSFPKISKNVDAISSMIYPSHWSNGDFGLQAPDTEPYKTVNRYIQKENSLLDTLGKDKPISRPWIQDFTASYLGAGNYIDYDTRAISEEVQALKDNGVNEFLLWNAGNDYTEGVNYNPKKGNAKEQDPEGAEQTNNKDDQHSDSQDNEQADNKNK . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 81021 82355 . + 0 GCA_005502385.1_00185 GCA_005502385.1_00185_gene,GCA_005502385.1_00185_mRNA GCA_005502385.1_00185 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKNKIFAVLTTSALLLAACSNGDNASDSKQKDGNQKNEQSSNKSGNSQSDALKKNNDKNTNENKVDYPKDGVKGIYVTSNSTQGKKMDELVKFIKDSNLNTMVIDVKDDTGNITMKLNTGNKQVDKNTLDIVDGKKLLKKLHDNNIYPIARIVTFKDTKLANEHPEWTFKNSDGSVWTNGKGDSFVNPFMKEVWKYDIDVAKAAAKAGFQDIQFDYVRFPEGFENQADSLTYNKGEYKNSQMSSGDQRVDTITKFLEYANKELKPMGVNVSADVFGYSALVENAPGIGQSFPKISKNVDAISSMIYPSHWSNGDFGLQAPDTEPYKTVNRYIQKENSLLDTLGKDKPISRPWIQDFTASYLGAGNYIDYDTRAISEEVQALKDNGVNEFLLWNAGNDYTEGVNYNPKKGNAKEQDPEGAEQTNNKDDQHSDSQDNEQADNKNK persistent 444 GTP-binding protein WP_069723734.1 UPI000851EA6E UniRef100_UPI000851EA6E,UniRef50_Q4L9B3,UniRef90_A0A3S7GZQ5 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 82512 83132 . - . GCA_005502385.1_00186_gene GCA_005502385.1_00186 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKVSFVTSTLLTSTMLLTTTQSVEAHTTNLVTKENAKQIATDALSNSGGNPNLQRLGHTVDKGAYFEIISHNRLNEGSGMYKVHKNGEVEYKNGRYSDFNQLQDTRIHAESGIAKTAKTTSSNHKQVHSVDCARELNRYYVGTVASSEVPSSKSLKDTQTSQSSVKTLPSTGDVTQQYSTQLLASLLLVMGTSLLLKRKHHSHSY . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 82512 83132 . - . GCA_005502385.1_00186_mRNA GCA_005502385.1_00186 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKVSFVTSTLLTSTMLLTTTQSVEAHTTNLVTKENAKQIATDALSNSGGNPNLQRLGHTVDKGAYFEIISHNRLNEGSGMYKVHKNGEVEYKNGRYSDFNQLQDTRIHAESGIAKTAKTTSSNHKQVHSVDCARELNRYYVGTVASSEVPSSKSLKDTQTSQSSVKTLPSTGDVTQQYSTQLLASLLLVMGTSLLLKRKHHSHSY . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 82512 83132 . - 0 GCA_005502385.1_00186 GCA_005502385.1_00186_gene,GCA_005502385.1_00186_mRNA GCA_005502385.1_00186 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKVSFVTSTLLTSTMLLTTTQSVEAHTTNLVTKENAKQIATDALSNSGGNPNLQRLGHTVDKGAYFEIISHNRLNEGSGMYKVHKNGEVEYKNGRYSDFNQLQDTRIHAESGIAKTAKTTSSNHKQVHSVDCARELNRYYVGTVASSEVPSSKSLKDTQTSQSSVKTLPSTGDVTQQYSTQLLASLLLVMGTSLLLKRKHHSHSY persistent 206 Cell surface protein WP_069723735.1 UPI000851C571 UniRef100_UPI000851C571,UniRef50_Q4L9B0,UniRef90_A0AAE5JMF0 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 83299 83724 . - . GCA_005502385.1_00187_gene GCA_005502385.1_00187 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MIRYFYHCLSALVISIILLITMTIMDGIVQSTHLTLLLINIDFLIDPSKTPLLLELVIHVFIGWLIYFIFLLIYHVFKPLYKISYVLLMIVFASLYPSLVVMAKRSFFHFSWNEYGLWMIAHIIFMILMACSIPYFSKKKY . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 83299 83724 . - . GCA_005502385.1_00187_mRNA GCA_005502385.1_00187 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MIRYFYHCLSALVISIILLITMTIMDGIVQSTHLTLLLINIDFLIDPSKTPLLLELVIHVFIGWLIYFIFLLIYHVFKPLYKISYVLLMIVFASLYPSLVVMAKRSFFHFSWNEYGLWMIAHIIFMILMACSIPYFSKKKY . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 83299 83724 . - 0 GCA_005502385.1_00187 GCA_005502385.1_00187_gene,GCA_005502385.1_00187_mRNA GCA_005502385.1_00187 hypothetical protein GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MIRYFYHCLSALVISIILLITMTIMDGIVQSTHLTLLLINIDFLIDPSKTPLLLELVIHVFIGWLIYFIFLLIYHVFKPLYKISYVLLMIVFASLYPSLVVMAKRSFFHFSWNEYGLWMIAHIIFMILMACSIPYFSKKKY persistent 141 Integral membrane protein WP_069723736.1 UPI0008519916 UniRef100_UPI0008519916,UniRef50_A0A974QP68,UniRef90_A0A974QP68 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 83872 83978 . + . GCA_005502385.1_00188_gene GCA_005502385.1_00188 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 83872 83978 . + . GCA_005502385.1_00188_mRNA GCA_005502385.1_00188 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 . . . . . . . GCA_005502385.1|SCOV01000011.1 Infernal:001001 misc_RNA 83872 83978 88.9 + . GCA_005502385.1_00188 GCA_005502385.1_00188_gene,GCA_005502385.1_00188_mRNA GCA_005502385.1_00188 SAM GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka gene 84087 84902 . + . GCA_005502385.1_00189_gene GCA_005502385.1_00189 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKLIGMISILLVTITLAACGNQKEDNKKITVAASPAPHGDVLKKAKEEMKKKGYDLEVKEVNDYKVPNKLLDKGDVDANFFQHVPYLNAEKKSHGYKIEELGKVFTTPMGVYSKKYKNLKDIPDGSTIYVSNNPAEEGRFLSFFVNEGLIKLKKGVKIENAKFEDIAENKKHLKFNHQQGAEFLPKTYKNGEGAAVIINSNYALDNGLKPSKDAIVMEGKSSPFANTIAVQEGHKNDEKFQTLLKVMQSKEIKAYIKKEYGDDVIPYENK . . . . . . . GCA_005502385.1|SCOV01000011.1 prokka mRNA 84087 84902 . + . GCA_005502385.1_00189_mRNA GCA_005502385.1_00189 GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKLIGMISILLVTITLAACGNQKEDNKKITVAASPAPHGDVLKKAKEEMKKKGYDLEVKEVNDYKVPNKLLDKGDVDANFFQHVPYLNAEKKSHGYKIEELGKVFTTPMGVYSKKYKNLKDIPDGSTIYVSNNPAEEGRFLSFFVNEGLIKLKKGVKIENAKFEDIAENKKHLKFNHQQGAEFLPKTYKNGEGAAVIINSNYALDNGLKPSKDAIVMEGKSSPFANTIAVQEGHKNDEKFQTLLKVMQSKEIKAYIKKEYGDDVIPYENK . . . . . . . GCA_005502385.1|SCOV01000011.1 Prodigal:002006 CDS 84087 84902 . + 0 GCA_005502385.1_00189 GCA_005502385.1_00189_gene,GCA_005502385.1_00189_mRNA GCA_005502385.1_00189 Methionine-binding lipoprotein MetQ GCA_005502385.1 SCOV01000011.1 GCA_005502385.1|SCOV01000011.1 GCA_005502385.1_SCOV01000011.1 MKKLIGMISILLVTITLAACGNQKEDNKKITVAASPAPHGDVLKKAKEEMKKKGYDLEVKEVNDYKVPNKLLDKGDVDANFFQHVPYLNAEKKSHGYKIEELGKVFTTPMGVYSKKYKNLKDIPDGSTIYVSNNPAEEGRFLSFFVNEGLIKLKKGVKIENAKFEDIAENKKHLKFNHQQGAEFLPKTYKNGEGAAVIINSNYALDNGLKPSKDAIVMEGKSSPFANTIAVQEGHKNDEKFQTLLKVMQSKEIKAYIKKEYGDDVIPYENK persistent 271 nlpA Lipoprotein COG1464,P WP_002449288.1 UPI00019FC473 UniRef100_A0A974QNX1,UniRef50_A0A380G8D6,UniRef90_A0A974QNX1 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 129 202 . - . GCA_005502385.1_00190_gene GCA_005502385.1_00190 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 129 202 . - . GCA_005502385.1_00190_mRNA GCA_005502385.1_00190 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 . . . . . . . GCA_005502385.1|SCOV01000012.1 Aragorn:001002 tRNA 129 202 . - . GCA_005502385.1_00190 GCA_005502385.1_00190_gene,GCA_005502385.1_00190_mRNA GCA_005502385.1_00190 tRNA-Gly(tcc) GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 227 312 . - . GCA_005502385.1_00191_gene GCA_005502385.1_00191 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 227 312 . - . GCA_005502385.1_00191_mRNA GCA_005502385.1_00191 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 . . . . . . . GCA_005502385.1|SCOV01000012.1 Aragorn:001002 tRNA 227 312 . - . GCA_005502385.1_00191 GCA_005502385.1_00191_gene,GCA_005502385.1_00191_mRNA GCA_005502385.1_00191 tRNA-Leu(gag) GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 583 1035 . - . GCA_005502385.1_00192_gene GCA_005502385.1_00192 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNNKMLQKLVETTSLEYFKQPFKHKAYFNSRLRTTGGRYVLSTHHIEINPKQFSRFGKEALINIIKHELCHYHLHLSGKGYQHKDHDFKMLSNKVQAPRFCQPIQSYEERANYIYQCCKCKTTYLRIRKVNTDKMRCGKCGSKLKLKMYL . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 583 1035 . - . GCA_005502385.1_00192_mRNA GCA_005502385.1_00192 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNNKMLQKLVETTSLEYFKQPFKHKAYFNSRLRTTGGRYVLSTHHIEINPKQFSRFGKEALINIIKHELCHYHLHLSGKGYQHKDHDFKMLSNKVQAPRFCQPIQSYEERANYIYQCCKCKTTYLRIRKVNTDKMRCGKCGSKLKLKMYL . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 583 1035 . - 0 GCA_005502385.1_00192 GCA_005502385.1_00192_gene,GCA_005502385.1_00192_mRNA GCA_005502385.1_00192 Protein SprT-like protein GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNNKMLQKLVETTSLEYFKQPFKHKAYFNSRLRTTGGRYVLSTHHIEINPKQFSRFGKEALINIIKHELCHYHLHLSGKGYQHKDHDFKMLSNKVQAPRFCQPIQSYEERANYIYQCCKCKTTYLRIRKVNTDKMRCGKCGSKLKLKMYL persistent 150 sprT SprT family protein WP_017174802.1 UPI0003676398 UniRef100_A0A4Q9WPY4,UniRef50_B9DMI1,UniRef90_A0A4Q9WPY4 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 1028 3175 . - . GCA_005502385.1_00193_gene GCA_005502385.1_00193 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MEKTLINDIVKKYQFLEKQVIAVLNLLEENNTVPFIARYRKEATGGLDEVQIKQISDEYQYVAHLQKRKEEVIHNIEQQGLLTDELKQDILQQTKLQRVEDLYRPFKQKKKTRATEAKRKGLAPLAHFLIEGQSMNVNEEARKYLSEEVKTVDEAIQGAQDIIAERISDNPKYRQRLLKDVYYQGKIVTTKKKQANDEKEIFSMYYDYSEPIKRIVNHRILAMNRGEKEKVLSIKIEFDTTSIETFIQSQEVKKAHQLVEYIESAIKDSLKRLIMPSIEREIRNDLTEKAEHHAIEVFSENLKHLLLQPPMKGKQILGVDPAFRTGCKLAVINPFGTFIAKSVIYPHPPKSKIELAEKELVRMITENNVELIAIGNGTASRETEQFVANVIKKYQLNAQFIIVNEAGASVYSASEIARNEFPEFQVEERSAVSIGRRVQDPLSELVKIDPKSIGVGQYQHDVNQKELEQALTFVVETAVNQVGVDVNTASKSLLQYVSGLSSTIAQNIIDYREENGSIKHHSEISKVKRLGSKTFEQSIGFLRIVNGKEPLDNTSIHPESYQATYQFLESLQLSIDDLGSDKLKQTLSDINIEEKSNEIGIGKPTLEDIIKSLKAPNRDPRDSYETPQLKSDILSIEDLSKGMKLSGTVRNVVDFGAFVDIGVKQDGLVHISKLSKKYVKNPMDVISVGDIVDVWILNIDKNKEKVSLTMINPNE . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 1028 3175 . - . GCA_005502385.1_00193_mRNA GCA_005502385.1_00193 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MEKTLINDIVKKYQFLEKQVIAVLNLLEENNTVPFIARYRKEATGGLDEVQIKQISDEYQYVAHLQKRKEEVIHNIEQQGLLTDELKQDILQQTKLQRVEDLYRPFKQKKKTRATEAKRKGLAPLAHFLIEGQSMNVNEEARKYLSEEVKTVDEAIQGAQDIIAERISDNPKYRQRLLKDVYYQGKIVTTKKKQANDEKEIFSMYYDYSEPIKRIVNHRILAMNRGEKEKVLSIKIEFDTTSIETFIQSQEVKKAHQLVEYIESAIKDSLKRLIMPSIEREIRNDLTEKAEHHAIEVFSENLKHLLLQPPMKGKQILGVDPAFRTGCKLAVINPFGTFIAKSVIYPHPPKSKIELAEKELVRMITENNVELIAIGNGTASRETEQFVANVIKKYQLNAQFIIVNEAGASVYSASEIARNEFPEFQVEERSAVSIGRRVQDPLSELVKIDPKSIGVGQYQHDVNQKELEQALTFVVETAVNQVGVDVNTASKSLLQYVSGLSSTIAQNIIDYREENGSIKHHSEISKVKRLGSKTFEQSIGFLRIVNGKEPLDNTSIHPESYQATYQFLESLQLSIDDLGSDKLKQTLSDINIEEKSNEIGIGKPTLEDIIKSLKAPNRDPRDSYETPQLKSDILSIEDLSKGMKLSGTVRNVVDFGAFVDIGVKQDGLVHISKLSKKYVKNPMDVISVGDIVDVWILNIDKNKEKVSLTMINPNE . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 1028 3175 . - 0 GCA_005502385.1_00193 GCA_005502385.1_00193_gene,GCA_005502385.1_00193_mRNA GCA_005502385.1_00193 Protein YhgF GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MEKTLINDIVKKYQFLEKQVIAVLNLLEENNTVPFIARYRKEATGGLDEVQIKQISDEYQYVAHLQKRKEEVIHNIEQQGLLTDELKQDILQQTKLQRVEDLYRPFKQKKKTRATEAKRKGLAPLAHFLIEGQSMNVNEEARKYLSEEVKTVDEAIQGAQDIIAERISDNPKYRQRLLKDVYYQGKIVTTKKKQANDEKEIFSMYYDYSEPIKRIVNHRILAMNRGEKEKVLSIKIEFDTTSIETFIQSQEVKKAHQLVEYIESAIKDSLKRLIMPSIEREIRNDLTEKAEHHAIEVFSENLKHLLLQPPMKGKQILGVDPAFRTGCKLAVINPFGTFIAKSVIYPHPPKSKIELAEKELVRMITENNVELIAIGNGTASRETEQFVANVIKKYQLNAQFIIVNEAGASVYSASEIARNEFPEFQVEERSAVSIGRRVQDPLSELVKIDPKSIGVGQYQHDVNQKELEQALTFVVETAVNQVGVDVNTASKSLLQYVSGLSSTIAQNIIDYREENGSIKHHSEISKVKRLGSKTFEQSIGFLRIVNGKEPLDNTSIHPESYQATYQFLESLQLSIDDLGSDKLKQTLSDINIEEKSNEIGIGKPTLEDIIKSLKAPNRDPRDSYETPQLKSDILSIEDLSKGMKLSGTVRNVVDFGAFVDIGVKQDGLVHISKLSKKYVKNPMDVISVGDIVDVWILNIDKNKEKVSLTMINPNE persistent 715 RNA-binding transcriptional accessory protein WP_070548933.1 UPI0008A2DB77 UniRef100_UPI0008A2DB77,UniRef50_A0A1M6SVE8,UniRef90_A0A3S7H0G7 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 3301 4071 . - . GCA_005502385.1_00194_gene GCA_005502385.1_00194 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MTKESKSVNEISPEQINQWIKEHQDNINPHAQDKLVKHYRKLIESLAYKYSKGQSHHEDLVQVGMVGLIGAINRFDISFDRKFEAFLVPTVIGEIKRYLRDKTWSVHVPRRIKEIGPRIKKVGDELTNELGRSPSILEIANRLEVNEEEVLEAMEMGQSYNALSVDHSIEADKDGSTVTLLDIMGQQDDNYDLTEKRMILERILPILSDREREIIQCTFIEGLSQKETGERIGLSQMHVSRLQRTAIRKLQQAAKQ . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 3301 4071 . - . GCA_005502385.1_00194_mRNA GCA_005502385.1_00194 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MTKESKSVNEISPEQINQWIKEHQDNINPHAQDKLVKHYRKLIESLAYKYSKGQSHHEDLVQVGMVGLIGAINRFDISFDRKFEAFLVPTVIGEIKRYLRDKTWSVHVPRRIKEIGPRIKKVGDELTNELGRSPSILEIANRLEVNEEEVLEAMEMGQSYNALSVDHSIEADKDGSTVTLLDIMGQQDDNYDLTEKRMILERILPILSDREREIIQCTFIEGLSQKETGERIGLSQMHVSRLQRTAIRKLQQAAKQ . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 3301 4071 . - 0 GCA_005502385.1_00194 GCA_005502385.1_00194_gene,GCA_005502385.1_00194_mRNA GCA_005502385.1_00194 RNA polymerase sigma-B factor GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MTKESKSVNEISPEQINQWIKEHQDNINPHAQDKLVKHYRKLIESLAYKYSKGQSHHEDLVQVGMVGLIGAINRFDISFDRKFEAFLVPTVIGEIKRYLRDKTWSVHVPRRIKEIGPRIKKVGDELTNELGRSPSILEIANRLEVNEEEVLEAMEMGQSYNALSVDHSIEADKDGSTVTLLDIMGQQDDNYDLTEKRMILERILPILSDREREIIQCTFIEGLSQKETGERIGLSQMHVSRLQRTAIRKLQQAAKQ persistent 256 sigB RNA polymerase sigma factor SigB GO:0003700,GO:0006352,GO:0016987 WP_017174800.1 UPI00030DBD49 UniRef100_A0A4Q9WS89,UniRef50_P06574,UniRef90_Q5HMF1 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 4046 4525 . - . GCA_005502385.1_00195_gene GCA_005502385.1_00195 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSLKNDYIEMKLPASAEYVSLIRLTLSGVFTRAGASYDDIEDSKIAVSEAVTNAVKHAYKHSEQNGMINICFELFDDKIKIIISDQGESFDYESTKSKLGPYQENENIDFLREGGLGLFLIESLMDEVKVSKESGVTISMIKYIKKEQVPNNDERVEIS . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 4046 4525 . - . GCA_005502385.1_00195_mRNA GCA_005502385.1_00195 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSLKNDYIEMKLPASAEYVSLIRLTLSGVFTRAGASYDDIEDSKIAVSEAVTNAVKHAYKHSEQNGMINICFELFDDKIKIIISDQGESFDYESTKSKLGPYQENENIDFLREGGLGLFLIESLMDEVKVSKESGVTISMIKYIKKEQVPNNDERVEIS . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 4046 4525 . - 0 GCA_005502385.1_00195 GCA_005502385.1_00195_gene,GCA_005502385.1_00195_mRNA GCA_005502385.1_00195 Serine-protein kinase RsbW GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSLKNDYIEMKLPASAEYVSLIRLTLSGVFTRAGASYDDIEDSKIAVSEAVTNAVKHAYKHSEQNGMINICFELFDDKIKIIISDQGESFDYESTKSKLGPYQENENIDFLREGGLGLFLIESLMDEVKVSKESGVTISMIKYIKKEQVPNNDERVEIS persistent 159 rsbW anti-sigma B factor RsbW 2.7.11.1 COG2172,T UPI00019FC61D UniRef100_A0A2A1MB08,UniRef50_P17904,UniRef90_A0A380FZL1 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 4527 4853 . - . GCA_005502385.1_00196_gene GCA_005502385.1_00196 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNLNIETITHDDYYEVIVGGELDVYTVPELEEVLVPMRQEGNHDIHVNLANVSYMDSTGLGLFVGTLKALNQNDKELYILGVTDRISRLFDITGLKDLMHVNEGTEVE . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 4527 4853 . - . GCA_005502385.1_00196_mRNA GCA_005502385.1_00196 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNLNIETITHDDYYEVIVGGELDVYTVPELEEVLVPMRQEGNHDIHVNLANVSYMDSTGLGLFVGTLKALNQNDKELYILGVTDRISRLFDITGLKDLMHVNEGTEVE . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 4527 4853 . - 0 GCA_005502385.1_00196 GCA_005502385.1_00196_gene,GCA_005502385.1_00196_mRNA GCA_005502385.1_00196 Anti-sigma-B factor antagonist GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNLNIETITHDDYYEVIVGGELDVYTVPELEEVLVPMRQEGNHDIHVNLANVSYMDSTGLGLFVGTLKALNQNDKELYILGVTDRISRLFDITGLKDLMHVNEGTEVE persistent 108 rsbV Anti-sigma-B factor antagonist GO:0043856 COG5815,DT WP_002448686.1 UPI00019FC61C UniRef100_A0A1L8Y5M1,UniRef50_P60070,UniRef90_Q5HME9 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 4939 5940 . - . GCA_005502385.1_00197_gene GCA_005502385.1_00197 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MEEFKKNYKQLIDESLVTKNKEQFLKKCDEFTEEVIKKDILPEDVVDLHKTYIASLNLKTSQILDTLDVLEEVVKGFGYSYRDYQNLVDKMQFHDKEIDLASRLQQTMLKTDIPQFDSIQIGVISVAAQKVSGDYFNLIDHRDGTMSFAVADVIGKGIPAALAMSMIKFGMDSYGHSQLPSDGLKRLNRVVEKNVNQNMFVTMFYGLYEEMNHLLYCSSAGHEPGYIYRAETETFEEIEVRGRVLGVSQHTRYSQQEIPIYLDDLIIIFTDGVTEARNKKGEFIAKDTVLNLIRKYKHMHPQDIVQILYEAILKIQNTQKRDDMTILVIKRVN . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 4939 5940 . - . GCA_005502385.1_00197_mRNA GCA_005502385.1_00197 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MEEFKKNYKQLIDESLVTKNKEQFLKKCDEFTEEVIKKDILPEDVVDLHKTYIASLNLKTSQILDTLDVLEEVVKGFGYSYRDYQNLVDKMQFHDKEIDLASRLQQTMLKTDIPQFDSIQIGVISVAAQKVSGDYFNLIDHRDGTMSFAVADVIGKGIPAALAMSMIKFGMDSYGHSQLPSDGLKRLNRVVEKNVNQNMFVTMFYGLYEEMNHLLYCSSAGHEPGYIYRAETETFEEIEVRGRVLGVSQHTRYSQQEIPIYLDDLIIIFTDGVTEARNKKGEFIAKDTVLNLIRKYKHMHPQDIVQILYEAILKIQNTQKRDDMTILVIKRVN . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 4939 5940 . - 0 GCA_005502385.1_00197 GCA_005502385.1_00197_gene,GCA_005502385.1_00197_mRNA GCA_005502385.1_00197 Phosphoserine phosphatase RsbU GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MEEFKKNYKQLIDESLVTKNKEQFLKKCDEFTEEVIKKDILPEDVVDLHKTYIASLNLKTSQILDTLDVLEEVVKGFGYSYRDYQNLVDKMQFHDKEIDLASRLQQTMLKTDIPQFDSIQIGVISVAAQKVSGDYFNLIDHRDGTMSFAVADVIGKGIPAALAMSMIKFGMDSYGHSQLPSDGLKRLNRVVEKNVNQNMFVTMFYGLYEEMNHLLYCSSAGHEPGYIYRAETETFEEIEVRGRVLGVSQHTRYSQQEIPIYLDDLIIIFTDGVTEARNKKGEFIAKDTVLNLIRKYKHMHPQDIVQILYEAILKIQNTQKRDDMTILVIKRVN persistent 333 Serine/threonine protein phosphatase WP_017174799.1 UPI0002FEEB6D UniRef100_A0A8X8GK11,UniRef50_S2XRQ7,UniRef90_A0AAE5JKW3 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 6312 6674 . - . GCA_005502385.1_00198_gene GCA_005502385.1_00198 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYRLDKDSVILLEQIRTLDKKRLKEKLTYLSEDKMKEVDDALDISLGLHDVRPQKN . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 6312 6674 . - . GCA_005502385.1_00198_mRNA GCA_005502385.1_00198 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYRLDKDSVILLEQIRTLDKKRLKEKLTYLSEDKMKEVDDALDISLGLHDVRPQKN . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 6312 6674 . - 0 GCA_005502385.1_00198 GCA_005502385.1_00198_gene,GCA_005502385.1_00198_mRNA GCA_005502385.1_00198 Endoribonuclease MazF GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYRLDKDSVILLEQIRTLDKKRLKEKLTYLSEDKMKEVDDALDISLGLHDVRPQKN persistent 120 mazF Endoribonuclease MazF 3.1.-.- GO:0003677,GO:0003723,GO:0004521,GO:0006402,GO:0016075 COG2337,V WP_017174798.1 UPI00030D885C UniRef100_A0A4Q9WNP6,UniRef50_Q2FWI8,UniRef90_Q4L7V3 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 6671 6841 . - . GCA_005502385.1_00199_gene GCA_005502385.1_00199 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MLTFNQNRSHSLEQSLKEGYVQMADLNLSLATEAFPLECEACDCNESYLTSNYKSE . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 6671 6841 . - . GCA_005502385.1_00199_mRNA GCA_005502385.1_00199 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MLTFNQNRSHSLEQSLKEGYVQMADLNLSLATEAFPLECEACDCNESYLTSNYKSE . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 6671 6841 . - 0 GCA_005502385.1_00199 GCA_005502385.1_00199_gene,GCA_005502385.1_00199_mRNA GCA_005502385.1_00199 Antitoxin MazE GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MLTFNQNRSHSLEQSLKEGYVQMADLNLSLATEAFPLECEACDCNESYLTSNYKSE persistent 56 mazE type II toxin-antitoxin system antitoxin MazE GO:0006355 WP_002448681.1 UPI00019FC619 UniRef100_A0A1L8Y5N2,UniRef50_Q2FWI7,UniRef90_Q4L7V4 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 6927 8072 . - . GCA_005502385.1_00200_gene GCA_005502385.1_00200 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSDVAYRPTYLNVDLDAILYNYNIFKTLQSDKLVIPVIKANGYGLGSVKIAEILENNGAQFFAVATLDEAIELRLHNVNAKLLVLGAISPKDINKAIQYDITLTVPSQFWLERAIHYIEDNSDHVYLHVKLDTGMGRLGIKTLEEYQLVINLIKEHPNLIFDGVFTHFANADEPGDSMKQQYAFFEELVTKAERPKYIHAQNSAGALLANCKLCNALRLGISLYGYYPSEYVRNEVDVQLKPSAKLITQVVQTKYLNPGDSVSYGSTFTATEKMKIAVLPIGYADGFLRSMQGFAVNVNQQQCEIIGRVCMDQMIISVPDDVKEGDEVILIDNNLNSSQAVEALAAKQNTINYEVLCNLGRRLPRIYYLNKKFEVTNELLN . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 6927 8072 . - . GCA_005502385.1_00200_mRNA GCA_005502385.1_00200 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSDVAYRPTYLNVDLDAILYNYNIFKTLQSDKLVIPVIKANGYGLGSVKIAEILENNGAQFFAVATLDEAIELRLHNVNAKLLVLGAISPKDINKAIQYDITLTVPSQFWLERAIHYIEDNSDHVYLHVKLDTGMGRLGIKTLEEYQLVINLIKEHPNLIFDGVFTHFANADEPGDSMKQQYAFFEELVTKAERPKYIHAQNSAGALLANCKLCNALRLGISLYGYYPSEYVRNEVDVQLKPSAKLITQVVQTKYLNPGDSVSYGSTFTATEKMKIAVLPIGYADGFLRSMQGFAVNVNQQQCEIIGRVCMDQMIISVPDDVKEGDEVILIDNNLNSSQAVEALAAKQNTINYEVLCNLGRRLPRIYYLNKKFEVTNELLN . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 6927 8072 . - 0 GCA_005502385.1_00200 GCA_005502385.1_00200_gene,GCA_005502385.1_00200_mRNA GCA_005502385.1_00200 Alanine racemase 1 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSDVAYRPTYLNVDLDAILYNYNIFKTLQSDKLVIPVIKANGYGLGSVKIAEILENNGAQFFAVATLDEAIELRLHNVNAKLLVLGAISPKDINKAIQYDITLTVPSQFWLERAIHYIEDNSDHVYLHVKLDTGMGRLGIKTLEEYQLVINLIKEHPNLIFDGVFTHFANADEPGDSMKQQYAFFEELVTKAERPKYIHAQNSAGALLANCKLCNALRLGISLYGYYPSEYVRNEVDVQLKPSAKLITQVVQTKYLNPGDSVSYGSTFTATEKMKIAVLPIGYADGFLRSMQGFAVNVNQQQCEIIGRVCMDQMIISVPDDVKEGDEVILIDNNLNSSQAVEALAAKQNTINYEVLCNLGRRLPRIYYLNKKFEVTNELLN persistent 381 alr alanine racemase 5.1.1.1 GO:0006522,GO:0008784,GO:0009252 WP_049379483.1 UPI00066E25D8 UniRef100_UPI00066E25D8,UniRef50_P63479,UniRef90_A0A657ZQW7 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 8115 8468 . - . GCA_005502385.1_00201_gene GCA_005502385.1_00201 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MIHGIGIDLIEIDRIKDVYIKQSDKLIHRILTEQEQQKFNSFKNDKRKLEFLAGRFATKEAFSKALGTGLGKTVAFNDIDCYNDEKGKPCIEYPGFIVHVSITHTQHYAMSEVILEK . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 8115 8468 . - . GCA_005502385.1_00201_mRNA GCA_005502385.1_00201 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MIHGIGIDLIEIDRIKDVYIKQSDKLIHRILTEQEQQKFNSFKNDKRKLEFLAGRFATKEAFSKALGTGLGKTVAFNDIDCYNDEKGKPCIEYPGFIVHVSITHTQHYAMSEVILEK . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 8115 8468 . - 0 GCA_005502385.1_00201 GCA_005502385.1_00201_gene,GCA_005502385.1_00201_mRNA GCA_005502385.1_00201 Holo-[acyl-carrier-protein] synthase GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MIHGIGIDLIEIDRIKDVYIKQSDKLIHRILTEQEQQKFNSFKNDKRKLEFLAGRFATKEAFSKALGTGLGKTVAFNDIDCYNDEKGKPCIEYPGFIVHVSITHTQHYAMSEVILEK persistent 117 Holo-[acyl-carrier-protein] synthase WP_017174796.1 UPI0003152C22 UniRef100_A0A4Q9WPP0,UniRef50_Q9ZAH6,UniRef90_A0A6N0I1H6 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 8496 8972 . - . GCA_005502385.1_00202_gene GCA_005502385.1_00202 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNEHSFMNTSGLKVMRITSLIGLIIITVFLFLLNMIDVYFTHISKLSINIIISIVIILLYIILFIIVIPLLRYHYFSYYYDENEIHIRKGIITVETDMIPFYRIQNIEVIEGFIMRKYKLAHLHLSTAGGECNIELIAKKEAIYLKQMIQNRKHELYE . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 8496 8972 . - . GCA_005502385.1_00202_mRNA GCA_005502385.1_00202 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNEHSFMNTSGLKVMRITSLIGLIIITVFLFLLNMIDVYFTHISKLSINIIISIVIILLYIILFIIVIPLLRYHYFSYYYDENEIHIRKGIITVETDMIPFYRIQNIEVIEGFIMRKYKLAHLHLSTAGGECNIELIAKKEAIYLKQMIQNRKHELYE . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 8496 8972 . - 0 GCA_005502385.1_00202 GCA_005502385.1_00202_gene,GCA_005502385.1_00202_mRNA GCA_005502385.1_00202 hypothetical protein GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNEHSFMNTSGLKVMRITSLIGLIIITVFLFLLNMIDVYFTHISKLSINIIISIVIILLYIILFIIVIPLLRYHYFSYYYDENEIHIRKGIITVETDMIPFYRIQNIEVIEGFIMRKYKLAHLHLSTAGGECNIELIAKKEAIYLKQMIQNRKHELYE persistent 158 YdbS-like PH domain-containing protein WP_017174795.1 UPI00031F0471 UniRef100_A0A4Q9WPZ3,UniRef50_A0A974QMX1,UniRef90_A0A974QMX1 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 8965 10467 . - . GCA_005502385.1_00203_gene GCA_005502385.1_00203 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MIFKPQKLHPISYFTGLINVIKQNIFVIIVFIGFNIWNFDFTNIRHYIGPGIFLLIILFSMINQFQKVRLTRYWIENDQFIVTSGWLNKKRKELNLNRIQSLDTTQGLINQLVGGVRLQIKTPSDGIELETISKQQSELIERTIKKRQLQLDSQEIETNHKPNNSEQELISEDNSNNKVIFKMSNKLLIFMSLTSGVIGVAFATISPIIGAFEDVIPWEKWTSRLFQWIQSVTFLVTIIILTVLIFCYVIGTLIVFLRYYNYTITQRDNELKITYGLLNVKNVTVPTERLQAVVEKQSFIRKLFGYTSIYFIITSDLEVKSNEDVSENGKIMILPFINKKEAYSIIRKLIPEMQFNSITENVPKRGYHRHFFIPSIILILGATIGAYYWSIWSYMIAIIMIIFMAIHAYVYISVSGLCNRKNEIALRQVSIMHINSYYFKKDKIIGMNVNQNPLLEKSHLAHLHFIIAKGAVNEDIKLKYASEKQVQLNIETYLGGSKIE . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 8965 10467 . - . GCA_005502385.1_00203_mRNA GCA_005502385.1_00203 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MIFKPQKLHPISYFTGLINVIKQNIFVIIVFIGFNIWNFDFTNIRHYIGPGIFLLIILFSMINQFQKVRLTRYWIENDQFIVTSGWLNKKRKELNLNRIQSLDTTQGLINQLVGGVRLQIKTPSDGIELETISKQQSELIERTIKKRQLQLDSQEIETNHKPNNSEQELISEDNSNNKVIFKMSNKLLIFMSLTSGVIGVAFATISPIIGAFEDVIPWEKWTSRLFQWIQSVTFLVTIIILTVLIFCYVIGTLIVFLRYYNYTITQRDNELKITYGLLNVKNVTVPTERLQAVVEKQSFIRKLFGYTSIYFIITSDLEVKSNEDVSENGKIMILPFINKKEAYSIIRKLIPEMQFNSITENVPKRGYHRHFFIPSIILILGATIGAYYWSIWSYMIAIIMIIFMAIHAYVYISVSGLCNRKNEIALRQVSIMHINSYYFKKDKIIGMNVNQNPLLEKSHLAHLHFIIAKGAVNEDIKLKYASEKQVQLNIETYLGGSKIE . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 8965 10467 . - 0 GCA_005502385.1_00203 GCA_005502385.1_00203_gene,GCA_005502385.1_00203_mRNA GCA_005502385.1_00203 hypothetical protein GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MIFKPQKLHPISYFTGLINVIKQNIFVIIVFIGFNIWNFDFTNIRHYIGPGIFLLIILFSMINQFQKVRLTRYWIENDQFIVTSGWLNKKRKELNLNRIQSLDTTQGLINQLVGGVRLQIKTPSDGIELETISKQQSELIERTIKKRQLQLDSQEIETNHKPNNSEQELISEDNSNNKVIFKMSNKLLIFMSLTSGVIGVAFATISPIIGAFEDVIPWEKWTSRLFQWIQSVTFLVTIIILTVLIFCYVIGTLIVFLRYYNYTITQRDNELKITYGLLNVKNVTVPTERLQAVVEKQSFIRKLFGYTSIYFIITSDLEVKSNEDVSENGKIMILPFINKKEAYSIIRKLIPEMQFNSITENVPKRGYHRHFFIPSIILILGATIGAYYWSIWSYMIAIIMIIFMAIHAYVYISVSGLCNRKNEIALRQVSIMHINSYYFKKDKIIGMNVNQNPLLEKSHLAHLHFIIAKGAVNEDIKLKYASEKQVQLNIETYLGGSKIE persistent 500 YdbS-like PH domain-containing protein WP_048787779.1 UPI000661584A UniRef100_UPI000661584A,UniRef50_A0A853V2V5,UniRef90_A0A974QMW7 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 10457 10936 . - . GCA_005502385.1_00204_gene GCA_005502385.1_00204 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MQLHHSFHKSPKSAFLYHWLVSGVTLLIELIILGGGLCCWKAFHWPHFIFYILLVLTICSLIRFILQPINRYSYRFYNIENKNIEILNTFIFKRYKTTKIERLQLLKVKTNPLLKQFNLKRIIVVTAGHELTTPVVSNKEAERLILHILSQMRGSNDDI . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 10457 10936 . - . GCA_005502385.1_00204_mRNA GCA_005502385.1_00204 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MQLHHSFHKSPKSAFLYHWLVSGVTLLIELIILGGGLCCWKAFHWPHFIFYILLVLTICSLIRFILQPINRYSYRFYNIENKNIEILNTFIFKRYKTTKIERLQLLKVKTNPLLKQFNLKRIIVVTAGHELTTPVVSNKEAERLILHILSQMRGSNDDI . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 10457 10936 . - 0 GCA_005502385.1_00204 GCA_005502385.1_00204_gene,GCA_005502385.1_00204_mRNA GCA_005502385.1_00204 hypothetical protein GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MQLHHSFHKSPKSAFLYHWLVSGVTLLIELIILGGGLCCWKAFHWPHFIFYILLVLTICSLIRFILQPINRYSYRFYNIENKNIEILNTFIFKRYKTTKIERLQLLKVKTNPLLKQFNLKRIIVVTAGHELTTPVVSNKEAERLILHILSQMRGSNDDI persistent 159 YdbS-like PH domain-containing protein WP_017174793.1 UPI0002EDCDE8 UniRef100_A0A4Q9WNQ8,UniRef50_A0A2K4DUX4,UniRef90_A0A974QMW4 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 11184 12695 . - . GCA_005502385.1_00205_gene GCA_005502385.1_00205 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MQNFKELGISDKTVKTLEEMGFKEPTPIQKESIPYTLEGKDILGQAQTGTGKTGAFGIPLIEKVVGKSGVQALILAPTRELAMQVAEQLREFSRGQNIQVVTVFGGMPIDRQIKALKRGPQIVVGTPGRVIDHLNRRTLKTNDIHTLILDEADEMMNMGFIDDMRFIMDKIPAEQRQTMLFSATMPKAIQTLVQQFMKSPQIVKTMNNEMSDPQIDEYYTIVKELEKFDTFTNFLDVHQPELAIVFGRTKRRVDELTSALLTKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEEVNDRRMKALRPPHRKEVLKAREEDIKDKVKNWMSRESEDRLKRISSELLEEYDSTELVASLLQELVEANDEVEVQLTFEKPLARKSRNNKGNQSRRGGKRNNKFDNKNKRSKGNFNKKKGKKQDRRDRQDKRKTSIKGRTFADLQK . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 11184 12695 . - . GCA_005502385.1_00205_mRNA GCA_005502385.1_00205 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MQNFKELGISDKTVKTLEEMGFKEPTPIQKESIPYTLEGKDILGQAQTGTGKTGAFGIPLIEKVVGKSGVQALILAPTRELAMQVAEQLREFSRGQNIQVVTVFGGMPIDRQIKALKRGPQIVVGTPGRVIDHLNRRTLKTNDIHTLILDEADEMMNMGFIDDMRFIMDKIPAEQRQTMLFSATMPKAIQTLVQQFMKSPQIVKTMNNEMSDPQIDEYYTIVKELEKFDTFTNFLDVHQPELAIVFGRTKRRVDELTSALLTKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEEVNDRRMKALRPPHRKEVLKAREEDIKDKVKNWMSRESEDRLKRISSELLEEYDSTELVASLLQELVEANDEVEVQLTFEKPLARKSRNNKGNQSRRGGKRNNKFDNKNKRSKGNFNKKKGKKQDRRDRQDKRKTSIKGRTFADLQK . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 11184 12695 . - 0 GCA_005502385.1_00205 GCA_005502385.1_00205_gene,GCA_005502385.1_00205_mRNA GCA_005502385.1_00205 DEAD-box ATP-dependent RNA helicase CshA GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MQNFKELGISDKTVKTLEEMGFKEPTPIQKESIPYTLEGKDILGQAQTGTGKTGAFGIPLIEKVVGKSGVQALILAPTRELAMQVAEQLREFSRGQNIQVVTVFGGMPIDRQIKALKRGPQIVVGTPGRVIDHLNRRTLKTNDIHTLILDEADEMMNMGFIDDMRFIMDKIPAEQRQTMLFSATMPKAIQTLVQQFMKSPQIVKTMNNEMSDPQIDEYYTIVKELEKFDTFTNFLDVHQPELAIVFGRTKRRVDELTSALLTKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEEVNDRRMKALRPPHRKEVLKAREEDIKDKVKNWMSRESEDRLKRISSELLEEYDSTELVASLLQELVEANDEVEVQLTFEKPLARKSRNNKGNQSRRGGKRNNKFDNKNKRSKGNFNKKKGKKQDRRDRQDKRKTSIKGRTFADLQK persistent 503 cshA DEAD-box ATP-dependent RNA helicase CshA WP_048787780.1 UPI000660F450 UniRef100_UPI000660F450,UniRef50_Q2FWH5,UniRef90_A0A4Z1BNU8 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 12927 14282 . - . GCA_005502385.1_00206_gene GCA_005502385.1_00206 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MIEVSLKQIQKWISCDIDEAYLEHQIKGVTIDSRHVEKEMLFVPFKGENVDGHRFVEQALKDGAGASFYEKGQDISDSIQGPIIWVDDTLTALQQLAKAYLKHVNPKVIGVTGSNGKTTTKDMIESVLHTEFRVKKTQGNYNNEIGLPLTILQLDKDTEISILEMGMSGFHEIELLSKIAEPDIAVITNIGESHMQDLGSREGIAKAKSEITIGLKSDGTFIYDGDEPLLKPHVENVKDAKLVSVGLNHDNTLVCKVENSKNDGIAFTINNKEHYELPILGIHNMKNATIAIAIGHELGLDYDTIQKNISNVQLTGMRMERHVTNNQITVINDAYNASPTSMKAAIDTLSNMNGRKIIVLADSLELGENSQRMHEDVGAYLDNKGIHTLLTYGNDAKFISRTGGQFVEDVAYFSDKNELTHYLKSILQPDDKVLIKGSRGNKLEEVVNALI . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 12927 14282 . - . GCA_005502385.1_00206_mRNA GCA_005502385.1_00206 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MIEVSLKQIQKWISCDIDEAYLEHQIKGVTIDSRHVEKEMLFVPFKGENVDGHRFVEQALKDGAGASFYEKGQDISDSIQGPIIWVDDTLTALQQLAKAYLKHVNPKVIGVTGSNGKTTTKDMIESVLHTEFRVKKTQGNYNNEIGLPLTILQLDKDTEISILEMGMSGFHEIELLSKIAEPDIAVITNIGESHMQDLGSREGIAKAKSEITIGLKSDGTFIYDGDEPLLKPHVENVKDAKLVSVGLNHDNTLVCKVENSKNDGIAFTINNKEHYELPILGIHNMKNATIAIAIGHELGLDYDTIQKNISNVQLTGMRMERHVTNNQITVINDAYNASPTSMKAAIDTLSNMNGRKIIVLADSLELGENSQRMHEDVGAYLDNKGIHTLLTYGNDAKFISRTGGQFVEDVAYFSDKNELTHYLKSILQPDDKVLIKGSRGNKLEEVVNALI . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 12927 14282 . - 0 GCA_005502385.1_00206 GCA_005502385.1_00206_gene,GCA_005502385.1_00206_mRNA GCA_005502385.1_00206 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MIEVSLKQIQKWISCDIDEAYLEHQIKGVTIDSRHVEKEMLFVPFKGENVDGHRFVEQALKDGAGASFYEKGQDISDSIQGPIIWVDDTLTALQQLAKAYLKHVNPKVIGVTGSNGKTTTKDMIESVLHTEFRVKKTQGNYNNEIGLPLTILQLDKDTEISILEMGMSGFHEIELLSKIAEPDIAVITNIGESHMQDLGSREGIAKAKSEITIGLKSDGTFIYDGDEPLLKPHVENVKDAKLVSVGLNHDNTLVCKVENSKNDGIAFTINNKEHYELPILGIHNMKNATIAIAIGHELGLDYDTIQKNISNVQLTGMRMERHVTNNQITVINDAYNASPTSMKAAIDTLSNMNGRKIIVLADSLELGENSQRMHEDVGAYLDNKGIHTLLTYGNDAKFISRTGGQFVEDVAYFSDKNELTHYLKSILQPDDKVLIKGSRGNKLEEVVNALI persistent 451 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 6.3.2.10 WP_017174791.1 UPI00030EE49D UniRef100_A0A8X8GJQ4,UniRef50_Q2FWH4,UniRef90_A0A8X8GJQ4 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 14298 15368 . - . GCA_005502385.1_00207_gene GCA_005502385.1_00207 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MVKENICIVYGGKSAEHDVSILTAQNVLNAINKDKYLVDIIYITNDGQWKKKENITKNIKTVEELHLEDISPGEITLLLKENGEGSKYDAIFPLLHGPNGEDGTIQGLFEVLDLPYVGNGVLAASSSMDKLVMKQLFEHRGLPQLPYISFLRSEYEKYEGNIIKLVNDKLTYPVFVKPANLGSSVGISKCNNEDELKKGIEEAFQFDRKLVIEQGIIAREVEVAVLGNDYPETTWPGEVIKDVQFYDYKSKYKDGKISLQIPADLDEEVQMTLRNMALEAFKATDCSGLVRADFFVTEDNQIYINETNAMPGFTAFSMYPSLWENMGLSYSDLITKLIDLAKERYEDKKKNKYTID . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 14298 15368 . - . GCA_005502385.1_00207_mRNA GCA_005502385.1_00207 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MVKENICIVYGGKSAEHDVSILTAQNVLNAINKDKYLVDIIYITNDGQWKKKENITKNIKTVEELHLEDISPGEITLLLKENGEGSKYDAIFPLLHGPNGEDGTIQGLFEVLDLPYVGNGVLAASSSMDKLVMKQLFEHRGLPQLPYISFLRSEYEKYEGNIIKLVNDKLTYPVFVKPANLGSSVGISKCNNEDELKKGIEEAFQFDRKLVIEQGIIAREVEVAVLGNDYPETTWPGEVIKDVQFYDYKSKYKDGKISLQIPADLDEEVQMTLRNMALEAFKATDCSGLVRADFFVTEDNQIYINETNAMPGFTAFSMYPSLWENMGLSYSDLITKLIDLAKERYEDKKKNKYTID . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 14298 15368 . - 0 GCA_005502385.1_00207 GCA_005502385.1_00207_gene,GCA_005502385.1_00207_mRNA GCA_005502385.1_00207 D-alanine--D-alanine ligase GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MVKENICIVYGGKSAEHDVSILTAQNVLNAINKDKYLVDIIYITNDGQWKKKENITKNIKTVEELHLEDISPGEITLLLKENGEGSKYDAIFPLLHGPNGEDGTIQGLFEVLDLPYVGNGVLAASSSMDKLVMKQLFEHRGLPQLPYISFLRSEYEKYEGNIIKLVNDKLTYPVFVKPANLGSSVGISKCNNEDELKKGIEEAFQFDRKLVIEQGIIAREVEVAVLGNDYPETTWPGEVIKDVQFYDYKSKYKDGKISLQIPADLDEEVQMTLRNMALEAFKATDCSGLVRADFFVTEDNQIYINETNAMPGFTAFSMYPSLWENMGLSYSDLITKLIDLAKERYEDKKKNKYTID persistent 356 ddl D-alanine--D-alanine ligase 6.3.2.4 GO:0005524,GO:0005829,GO:0008360,GO:0008716,GO:0009252,GO:0046872,GO:0071555 COG1181,MR WP_017174790.1 UPI0002D3333C UniRef100_A0A4V2KX09,UniRef50_Q8NVH8,UniRef90_Q4L7W2 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 15744 16928 . + . GCA_005502385.1_00208_gene GCA_005502385.1_00208 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKYSSRQQPTTHWLRKIDWILIALIMILAIISVTTISSAMGGGQYSANFGIRQIIYYILGAILALIVMIFSPKKIKNNTYIWYIFFCILLLGLLIIPETPITPIINGAKSWYAFGPISIQPSEFMKIILILALAKIVSNHNRFTFNKSFRTDLILFFKIIGISLVPMILILLQNDLGTTLVLCAIIVGIMLVSSITWRILAPIFITVAVLGSSIILAIIYKPSLIEKTLHIKMYQMGRINSWLNPYAYSNGDGYHLTESLKAIGSGQLFGKGYNHGEVYIPENHTDFIFSVIGEEIGFIGAVILLLIFLALIFHLIRLAIKTTSSFNKVFLIGYISLLVFHILQNIGMTIQLLPITGIPLPFISYGGSALWSLMLGIGVILSIYYHQKPASKDA . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 15744 16928 . + . GCA_005502385.1_00208_mRNA GCA_005502385.1_00208 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKYSSRQQPTTHWLRKIDWILIALIMILAIISVTTISSAMGGGQYSANFGIRQIIYYILGAILALIVMIFSPKKIKNNTYIWYIFFCILLLGLLIIPETPITPIINGAKSWYAFGPISIQPSEFMKIILILALAKIVSNHNRFTFNKSFRTDLILFFKIIGISLVPMILILLQNDLGTTLVLCAIIVGIMLVSSITWRILAPIFITVAVLGSSIILAIIYKPSLIEKTLHIKMYQMGRINSWLNPYAYSNGDGYHLTESLKAIGSGQLFGKGYNHGEVYIPENHTDFIFSVIGEEIGFIGAVILLLIFLALIFHLIRLAIKTTSSFNKVFLIGYISLLVFHILQNIGMTIQLLPITGIPLPFISYGGSALWSLMLGIGVILSIYYHQKPASKDA . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 15744 16928 . + 0 GCA_005502385.1_00208 GCA_005502385.1_00208_gene,GCA_005502385.1_00208_mRNA GCA_005502385.1_00208 Peptidoglycan glycosyltransferase RodA GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKYSSRQQPTTHWLRKIDWILIALIMILAIISVTTISSAMGGGQYSANFGIRQIIYYILGAILALIVMIFSPKKIKNNTYIWYIFFCILLLGLLIIPETPITPIINGAKSWYAFGPISIQPSEFMKIILILALAKIVSNHNRFTFNKSFRTDLILFFKIIGISLVPMILILLQNDLGTTLVLCAIIVGIMLVSSITWRILAPIFITVAVLGSSIILAIIYKPSLIEKTLHIKMYQMGRINSWLNPYAYSNGDGYHLTESLKAIGSGQLFGKGYNHGEVYIPENHTDFIFSVIGEEIGFIGAVILLLIFLALIFHLIRLAIKTTSSFNKVFLIGYISLLVFHILQNIGMTIQLLPITGIPLPFISYGGSALWSLMLGIGVILSIYYHQKPASKDA persistent 394 rodA Rod shape-determining protein RodA WP_048787782.1 UPI00065FB33B UniRef100_UPI00065FB33B,UniRef50_Q2FWH2,UniRef90_A0A3S7GX73 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 17089 17226 . - . GCA_005502385.1_00209_gene GCA_005502385.1_00209 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNKSDKLQNVVKLLSSLGVNIKKTKSRFDIINTLPTTKTVTQELK . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 17089 17226 . - . GCA_005502385.1_00209_mRNA GCA_005502385.1_00209 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNKSDKLQNVVKLLSSLGVNIKKTKSRFDIINTLPTTKTVTQELK . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 17089 17226 . - 0 GCA_005502385.1_00209 GCA_005502385.1_00209_gene,GCA_005502385.1_00209_mRNA GCA_005502385.1_00209 hypothetical protein GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNKSDKLQNVVKLLSSLGVNIKKTKSRFDIINTLPTTKTVTQELK persistent 45 Lmo0850 family protein WP_002437525.1 UPI00019FC60F UniRef100_A0A4Q9WNQ2,UniRef50_A0A0H2VHK0,UniRef90_A0A4Q9WNQ2 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 17339 17548 . - . GCA_005502385.1_00210_gene GCA_005502385.1_00210 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MLNSNIVFIDNIETEEQAQMLNERLLNMIGVHTVSIDIERNKVNVEYETPTNLNSIEKEIYDAGFKVLS . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 17339 17548 . - . GCA_005502385.1_00210_mRNA GCA_005502385.1_00210 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MLNSNIVFIDNIETEEQAQMLNERLLNMIGVHTVSIDIERNKVNVEYETPTNLNSIEKEIYDAGFKVLS . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 17339 17548 . - 0 GCA_005502385.1_00210 GCA_005502385.1_00210_gene,GCA_005502385.1_00210_mRNA GCA_005502385.1_00210 hypothetical protein GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MLNSNIVFIDNIETEEQAQMLNERLLNMIGVHTVSIDIERNKVNVEYETPTNLNSIEKEIYDAGFKVLS persistent 69 csoZ putative copper chaperone CsoZ WP_048787783.1 UPI00065F7DE3 UniRef100_A0A1K1Z7E3,UniRef50_Q2FWH0,UniRef90_A0A6B8SK15 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 17564 17857 . - . GCA_005502385.1_00211_gene GCA_005502385.1_00211 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MENQNHAHHSEQVKLNLKSRLNRIEGQVKAINRMIDEDVYCDDVLTQIRATRSALNSVATKLLEHHMKSCIMEKINQGTEEEAMEELLVTFQKLVKD . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 17564 17857 . - . GCA_005502385.1_00211_mRNA GCA_005502385.1_00211 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MENQNHAHHSEQVKLNLKSRLNRIEGQVKAINRMIDEDVYCDDVLTQIRATRSALNSVATKLLEHHMKSCIMEKINQGTEEEAMEELLVTFQKLVKD . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 17564 17857 . - 0 GCA_005502385.1_00211 GCA_005502385.1_00211_gene,GCA_005502385.1_00211_mRNA GCA_005502385.1_00211 Copper-sensing transcriptional repressor CsoR GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MENQNHAHHSEQVKLNLKSRLNRIEGQVKAINRMIDEDVYCDDVLTQIRATRSALNSVATKLLEHHMKSCIMEKINQGTEEEAMEELLVTFQKLVKD persistent 97 csoR copper-sensing transcriptional repressor CsoR WP_002437530.1 UPI00019FC60D UniRef100_A0A1L8Y5R0,UniRef50_K9AII0,UniRef90_A0A1L8Y5R0 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 18017 19507 . + . GCA_005502385.1_00212_gene GCA_005502385.1_00212 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNMVEIVQLSFLHSSLIINIILITAFILNLIFAFIIIFMERRSAGSIWAWLLVLVFLPIVGFILYLLLGRQIQRKHIFKLKKEDRKGLAMIVDEQLNALEKDDFSKGNHQIVKFKEMVHMLLYNNAAFLTTDNSIKIFTDGHAKFDALIEDIQNAKDYINIQYYIFKSDGLGRRILKALEDRLEDGIEVKMLYDDMGSRTLRKKDLKQFKDKGGRAEAFFPSKLPLINLRMNNRNHRKIVIIDGKIGYVGGFNVGDEYLGKDKKFGYWRDTHLRLEGDSVNALELRFILDWNSQSTRDNISYEDRYFPDVDSGGEIGVQIASSGPDEDWEQIKYGYLKMIMSAKHSIYIQSPYFIPDQAFIDAIKIAALGGVEVNLMIPCKPDHPFVYWATLKNAASLLDAGVKIYQYNNGFLHSKTLIVDDEIATVGTANMDNRSFTLNFEVNAFIYDEDISLQLKKAFIKDMKVSYELTKELYNQRSTWIKFKEGISQLLSPIL . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 18017 19507 . + . GCA_005502385.1_00212_mRNA GCA_005502385.1_00212 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNMVEIVQLSFLHSSLIINIILITAFILNLIFAFIIIFMERRSAGSIWAWLLVLVFLPIVGFILYLLLGRQIQRKHIFKLKKEDRKGLAMIVDEQLNALEKDDFSKGNHQIVKFKEMVHMLLYNNAAFLTTDNSIKIFTDGHAKFDALIEDIQNAKDYINIQYYIFKSDGLGRRILKALEDRLEDGIEVKMLYDDMGSRTLRKKDLKQFKDKGGRAEAFFPSKLPLINLRMNNRNHRKIVIIDGKIGYVGGFNVGDEYLGKDKKFGYWRDTHLRLEGDSVNALELRFILDWNSQSTRDNISYEDRYFPDVDSGGEIGVQIASSGPDEDWEQIKYGYLKMIMSAKHSIYIQSPYFIPDQAFIDAIKIAALGGVEVNLMIPCKPDHPFVYWATLKNAASLLDAGVKIYQYNNGFLHSKTLIVDDEIATVGTANMDNRSFTLNFEVNAFIYDEDISLQLKKAFIKDMKVSYELTKELYNQRSTWIKFKEGISQLLSPIL . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 18017 19507 . + 0 GCA_005502385.1_00212 GCA_005502385.1_00212_gene,GCA_005502385.1_00212_mRNA GCA_005502385.1_00212 Cardiolipin synthase GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNMVEIVQLSFLHSSLIINIILITAFILNLIFAFIIIFMERRSAGSIWAWLLVLVFLPIVGFILYLLLGRQIQRKHIFKLKKEDRKGLAMIVDEQLNALEKDDFSKGNHQIVKFKEMVHMLLYNNAAFLTTDNSIKIFTDGHAKFDALIEDIQNAKDYINIQYYIFKSDGLGRRILKALEDRLEDGIEVKMLYDDMGSRTLRKKDLKQFKDKGGRAEAFFPSKLPLINLRMNNRNHRKIVIIDGKIGYVGGFNVGDEYLGKDKKFGYWRDTHLRLEGDSVNALELRFILDWNSQSTRDNISYEDRYFPDVDSGGEIGVQIASSGPDEDWEQIKYGYLKMIMSAKHSIYIQSPYFIPDQAFIDAIKIAALGGVEVNLMIPCKPDHPFVYWATLKNAASLLDAGVKIYQYNNGFLHSKTLIVDDEIATVGTANMDNRSFTLNFEVNAFIYDEDISLQLKKAFIKDMKVSYELTKELYNQRSTWIKFKEGISQLLSPIL persistent 496 cls cardiolipin synthase 2.7.8.- GO:0008808,GO:0016780,GO:0032049 UniRef50_Q8Y4E3,UniRef90_A0A974KX00 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 19542 20189 . + . GCA_005502385.1_00213_gene GCA_005502385.1_00213 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNQAEQILLAKEYMYQFHKNDYSGHDIAHIERVTLLAKYIAKQEHQGDFLTIVLSALLHDVIDDKLTDKHHALSELHQFFKKIELDDTVQKNIIFIIKHLSYRNGRNNDVTLPIEGQIVRDADRLDAIGAIGIARTFQFSGHFNEPMWTESPYHSIPSEKDMVDLPPSAIRHFYDKLLKLKKLMHTQTGFQLAEERHQFMKLFLSQFYSEWHLEE . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 19542 20189 . + . GCA_005502385.1_00213_mRNA GCA_005502385.1_00213 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNQAEQILLAKEYMYQFHKNDYSGHDIAHIERVTLLAKYIAKQEHQGDFLTIVLSALLHDVIDDKLTDKHHALSELHQFFKKIELDDTVQKNIIFIIKHLSYRNGRNNDVTLPIEGQIVRDADRLDAIGAIGIARTFQFSGHFNEPMWTESPYHSIPSEKDMVDLPPSAIRHFYDKLLKLKKLMHTQTGFQLAEERHQFMKLFLSQFYSEWHLEE . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 19542 20189 . + 0 GCA_005502385.1_00213 GCA_005502385.1_00213_gene,GCA_005502385.1_00213_mRNA GCA_005502385.1_00213 putative protein YedJ GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNQAEQILLAKEYMYQFHKNDYSGHDIAHIERVTLLAKYIAKQEHQGDFLTIVLSALLHDVIDDKLTDKHHALSELHQFFKKIELDDTVQKNIIFIIKHLSYRNGRNNDVTLPIEGQIVRDADRLDAIGAIGIARTFQFSGHFNEPMWTESPYHSIPSEKDMVDLPPSAIRHFYDKLLKLKKLMHTQTGFQLAEERHQFMKLFLSQFYSEWHLEE persistent 215 HD domain-containing protein WP_002448635.1 UPI00019FC544 UniRef100_A0AAE5JM28,UniRef50_A0A3S7GWL7,UniRef90_A0A3S7GWL7 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 20247 21116 . - . GCA_005502385.1_00214_gene GCA_005502385.1_00214 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKKKALLPLLLGVMVFLAGCDYSKSSNRNGFFYNTFVEPMAKILHWLGHSVFHDDYGIAIIVLVLVIRIILLPFMLSNYKNSHMMREKMKIAKPEVEGVQEKVKRARTQEEKMAANQEMMEVYKKYDINPMKSALGCLPVLIQMPIVMGLYFVLRYRIGGGITEHPHFLWFNLVHPDIWITIIAGVLYFIQAWVSSKQMPEEQRQMTYMMMIVSPIMIIWISLSSASALGLYWSVSAAFLIIQTFFANKHYEKVAKQEIGPMVEAHKENNSNKKGKNTQVVSKNNKKKK . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 20247 21116 . - . GCA_005502385.1_00214_mRNA GCA_005502385.1_00214 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKKKALLPLLLGVMVFLAGCDYSKSSNRNGFFYNTFVEPMAKILHWLGHSVFHDDYGIAIIVLVLVIRIILLPFMLSNYKNSHMMREKMKIAKPEVEGVQEKVKRARTQEEKMAANQEMMEVYKKYDINPMKSALGCLPVLIQMPIVMGLYFVLRYRIGGGITEHPHFLWFNLVHPDIWITIIAGVLYFIQAWVSSKQMPEEQRQMTYMMMIVSPIMIIWISLSSASALGLYWSVSAAFLIIQTFFANKHYEKVAKQEIGPMVEAHKENNSNKKGKNTQVVSKNNKKKK . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 20247 21116 . - 0 GCA_005502385.1_00214 GCA_005502385.1_00214_gene,GCA_005502385.1_00214_mRNA GCA_005502385.1_00214 Membrane protein insertase YidC GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKKKALLPLLLGVMVFLAGCDYSKSSNRNGFFYNTFVEPMAKILHWLGHSVFHDDYGIAIIVLVLVIRIILLPFMLSNYKNSHMMREKMKIAKPEVEGVQEKVKRARTQEEKMAANQEMMEVYKKYDINPMKSALGCLPVLIQMPIVMGLYFVLRYRIGGGITEHPHFLWFNLVHPDIWITIIAGVLYFIQAWVSSKQMPEEQRQMTYMMMIVSPIMIIWISLSSASALGLYWSVSAAFLIIQTFFANKHYEKVAKQEIGPMVEAHKENNSNKKGKNTQVVSKNNKKKK persistent 289 yidC Membrane protein insertase YidC GO:0005886,GO:0015031,GO:0032977,GO:0051205 COG0706,M WP_002455066.1 UPI0001EF4FED UniRef100_A0AAE5JKU2,UniRef50_Q8CMK8,UniRef90_Q4L7X2 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 21205 21843 . - . GCA_005502385.1_00215_gene GCA_005502385.1_00215 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MFDSKSLQVYFICGTQDIIGDQNIKDVLKAALESGITLFQFREKGPNALVGDEKEALAKELKTLCHEYKVPFLINDDVDLAEKIDADGIHVGQDDEIIASFANRFKNKIIGLSVGNVKEYQQSDLEHVDYIGVGPMYETSSKSDASAPVGPEMIATLKNINPSLPMVAIGGITEDNCEPIAKEGADGVSVISVITHSQNIDKTVNKLKHYFK . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 21205 21843 . - . GCA_005502385.1_00215_mRNA GCA_005502385.1_00215 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MFDSKSLQVYFICGTQDIIGDQNIKDVLKAALESGITLFQFREKGPNALVGDEKEALAKELKTLCHEYKVPFLINDDVDLAEKIDADGIHVGQDDEIIASFANRFKNKIIGLSVGNVKEYQQSDLEHVDYIGVGPMYETSSKSDASAPVGPEMIATLKNINPSLPMVAIGGITEDNCEPIAKEGADGVSVISVITHSQNIDKTVNKLKHYFK . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 21205 21843 . - 0 GCA_005502385.1_00215 GCA_005502385.1_00215_gene,GCA_005502385.1_00215_mRNA GCA_005502385.1_00215 Thiamine-phosphate synthase GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MFDSKSLQVYFICGTQDIIGDQNIKDVLKAALESGITLFQFREKGPNALVGDEKEALAKELKTLCHEYKVPFLINDDVDLAEKIDADGIHVGQDDEIIASFANRFKNKIIGLSVGNVKEYQQSDLEHVDYIGVGPMYETSSKSDASAPVGPEMIATLKNINPSLPMVAIGGITEDNCEPIAKEGADGVSVISVITHSQNIDKTVNKLKHYFK persistent 212 Thiamine-phosphate synthase WP_048787784.1 UPI000660FF53 UniRef100_UPI000660FF53,UniRef50_Q5HMD0,UniRef90_A0A3S7GZK9 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 21846 22634 . - . GCA_005502385.1_00216_gene GCA_005502385.1_00216 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNSLEKIRQENPLVVCYTNDVVKNFTANGLLSIGASPAMSEAPEEAEEFYKVAGALLINIGTLTKANEKDILEIGKIANQQGTPIVFDPVAVGASTYRKQFCETFLSEINVSVIKGNASEILTLVDSNTTMKGTDGETDLDVVTIAKKAYEKYQTAIVITGREDVIIQDNQIVKLSNGSPLLAKITGAGCLLGGLVAGFLFRNTHPSLQVLEESVSYYNIAAEIAEKSEKVNGPGTFLSQLLDEMYQLNYDTYKQFVKREEV . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 21846 22634 . - . GCA_005502385.1_00216_mRNA GCA_005502385.1_00216 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNSLEKIRQENPLVVCYTNDVVKNFTANGLLSIGASPAMSEAPEEAEEFYKVAGALLINIGTLTKANEKDILEIGKIANQQGTPIVFDPVAVGASTYRKQFCETFLSEINVSVIKGNASEILTLVDSNTTMKGTDGETDLDVVTIAKKAYEKYQTAIVITGREDVIIQDNQIVKLSNGSPLLAKITGAGCLLGGLVAGFLFRNTHPSLQVLEESVSYYNIAAEIAEKSEKVNGPGTFLSQLLDEMYQLNYDTYKQFVKREEV . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 21846 22634 . - 0 GCA_005502385.1_00216 GCA_005502385.1_00216_gene,GCA_005502385.1_00216_mRNA GCA_005502385.1_00216 Hydroxyethylthiazole kinase GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNSLEKIRQENPLVVCYTNDVVKNFTANGLLSIGASPAMSEAPEEAEEFYKVAGALLINIGTLTKANEKDILEIGKIANQQGTPIVFDPVAVGASTYRKQFCETFLSEINVSVIKGNASEILTLVDSNTTMKGTDGETDLDVVTIAKKAYEKYQTAIVITGREDVIIQDNQIVKLSNGSPLLAKITGAGCLLGGLVAGFLFRNTHPSLQVLEESVSYYNIAAEIAEKSEKVNGPGTFLSQLLDEMYQLNYDTYKQFVKREEV persistent 262 thiM hydroxyethylthiazole kinase 2.7.1.50 GO:0004417,GO:0009228 WP_017175143.1 UPI000305504E UniRef100_A0A4Q9WPJ7,UniRef50_Q6GEY3,UniRef90_A0A974QN38 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 22627 23448 . - . GCA_005502385.1_00217_gene GCA_005502385.1_00217 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNKPKIALTIAGTDPSGGAGVMADLKSFHACGVYGMAAITSIVAQNTKGVQHIHNLETSWVKEQLDSVFDDELPHAIKTGMIATHETMELIQTYLKNHSNIPYVIDPVMLAKSGDSLMDDETKKHLQKTLLPLADVVTPNIPEAEEITGLKIDTEDNIRKAGHIFINEIGSKGVVIKGGHSADLNNAKDFLFTKDDVYTFEEKRFNTPHTHGTGCTFSAVITAELAKGKTIYEAVKKAKKFISLSIEHTPEIGQGRGPVNHFAYMKKVGLDDE . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 22627 23448 . - . GCA_005502385.1_00217_mRNA GCA_005502385.1_00217 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNKPKIALTIAGTDPSGGAGVMADLKSFHACGVYGMAAITSIVAQNTKGVQHIHNLETSWVKEQLDSVFDDELPHAIKTGMIATHETMELIQTYLKNHSNIPYVIDPVMLAKSGDSLMDDETKKHLQKTLLPLADVVTPNIPEAEEITGLKIDTEDNIRKAGHIFINEIGSKGVVIKGGHSADLNNAKDFLFTKDDVYTFEEKRFNTPHTHGTGCTFSAVITAELAKGKTIYEAVKKAKKFISLSIEHTPEIGQGRGPVNHFAYMKKVGLDDE . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 22627 23448 . - 0 GCA_005502385.1_00217 GCA_005502385.1_00217_gene,GCA_005502385.1_00217_mRNA GCA_005502385.1_00217 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNKPKIALTIAGTDPSGGAGVMADLKSFHACGVYGMAAITSIVAQNTKGVQHIHNLETSWVKEQLDSVFDDELPHAIKTGMIATHETMELIQTYLKNHSNIPYVIDPVMLAKSGDSLMDDETKKHLQKTLLPLADVVTPNIPEAEEITGLKIDTEDNIRKAGHIFINEIGSKGVVIKGGHSADLNNAKDFLFTKDDVYTFEEKRFNTPHTHGTGCTFSAVITAELAKGKTIYEAVKKAKKFISLSIEHTPEIGQGRGPVNHFAYMKKVGLDDE persistent 273 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase COG0351,H WP_017175142.1 UPI0002F8C29B UniRef100_A0A4V2KX11,UniRef50_P66915,UniRef90_A0A7T8ZPX1 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 23441 24130 . - . GCA_005502385.1_00218_gene GCA_005502385.1_00218 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSFSDELKQASKPIIEEIYNDGFIQDLLKGKLSKQAVRQYLRADASYLKEFTNLYALLIPKAPTMKEVKFLVEQIEFMLDGEVEAHEILADYINEPYEEIVKEKVWPPSGDHYIKHMYYHAYTHENAAYTIAAMAPCPYVYEVVAKWGLEDSNLNRDALTAKWFDFYSTEMAPLIEVFDRLLNELTEHCTEQEKREIKEAFLQSTVHERHFFNMAYIDEEWDFGGANHE . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 23441 24130 . - . GCA_005502385.1_00218_mRNA GCA_005502385.1_00218 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSFSDELKQASKPIIEEIYNDGFIQDLLKGKLSKQAVRQYLRADASYLKEFTNLYALLIPKAPTMKEVKFLVEQIEFMLDGEVEAHEILADYINEPYEEIVKEKVWPPSGDHYIKHMYYHAYTHENAAYTIAAMAPCPYVYEVVAKWGLEDSNLNRDALTAKWFDFYSTEMAPLIEVFDRLLNELTEHCTEQEKREIKEAFLQSTVHERHFFNMAYIDEEWDFGGANHE . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 23441 24130 . - 0 GCA_005502385.1_00218 GCA_005502385.1_00218_gene,GCA_005502385.1_00218_mRNA GCA_005502385.1_00218 Aminopyrimidine aminohydrolase GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSFSDELKQASKPIIEEIYNDGFIQDLLKGKLSKQAVRQYLRADASYLKEFTNLYALLIPKAPTMKEVKFLVEQIEFMLDGEVEAHEILADYINEPYEEIVKEKVWPPSGDHYIKHMYYHAYTHENAAYTIAAMAPCPYVYEVVAKWGLEDSNLNRDALTAKWFDFYSTEMAPLIEVFDRLLNELTEHCTEQEKREIKEAFLQSTVHERHFFNMAYIDEEWDFGGANHE persistent 229 tenA thiaminase II 3.5.99.2 GO:0006772,GO:0050334 WP_019835613.1 UPI000361789C UniRef100_A0A1L8Y5P3,UniRef50_Q6GEY1,UniRef90_A0A3S7GWZ6 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 24207 24309 . - . GCA_005502385.1_00219_gene GCA_005502385.1_00219 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 24207 24309 . - . GCA_005502385.1_00219_mRNA GCA_005502385.1_00219 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 . . . . . . . GCA_005502385.1|SCOV01000012.1 Infernal:001001 misc_RNA 24207 24309 83.5 - . GCA_005502385.1_00219 GCA_005502385.1_00219_gene,GCA_005502385.1_00219_mRNA GCA_005502385.1_00219 TPP GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 24522 25268 . - . GCA_005502385.1_00220_gene GCA_005502385.1_00220 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKKTIIASSLAVGLGLVAGNVSHADASENQINKEKLAQLAESNDQSLNQHPIQEGAYNYQFNLNGKTYHFWSDGTYFKWEYYPSNGSTVNSANQNVASTQSAQNVSFQNNNYNHINQSASTSNVSQHYANEAQTQQAPKTTQTKQATQTQQAPANATTNQPKQSTSGSSVNVNSHLQQIAQRESGGDIHAINPSSGAAGKYQFLQSTWDSVAPAQYKGVSPAQAPESVQDAAAVKLYNTAGPSQWVTA . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 24522 25268 . - . GCA_005502385.1_00220_mRNA GCA_005502385.1_00220 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKKTIIASSLAVGLGLVAGNVSHADASENQINKEKLAQLAESNDQSLNQHPIQEGAYNYQFNLNGKTYHFWSDGTYFKWEYYPSNGSTVNSANQNVASTQSAQNVSFQNNNYNHINQSASTSNVSQHYANEAQTQQAPKTTQTKQATQTQQAPANATTNQPKQSTSGSSVNVNSHLQQIAQRESGGDIHAINPSSGAAGKYQFLQSTWDSVAPAQYKGVSPAQAPESVQDAAAVKLYNTAGPSQWVTA . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 24522 25268 . - 0 GCA_005502385.1_00220 GCA_005502385.1_00220_gene,GCA_005502385.1_00220_mRNA GCA_005502385.1_00220 putative transglycosylase SceD GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKKTIIASSLAVGLGLVAGNVSHADASENQINKEKLAQLAESNDQSLNQHPIQEGAYNYQFNLNGKTYHFWSDGTYFKWEYYPSNGSTVNSANQNVASTQSAQNVSFQNNNYNHINQSASTSNVSQHYANEAQTQQAPKTTQTKQATQTQQAPANATTNQPKQSTSGSSVNVNSHLQQIAQRESGGDIHAINPSSGAAGKYQFLQSTWDSVAPAQYKGVSPAQAPESVQDAAAVKLYNTAGPSQWVTA persistent 248 Transglycosylase family protein WP_017175140.1 UPI00031F6532 UniRef100_A0A4Q9WNR1,UniRef50_Q2FWF8,UniRef90_A0A4Q9WNR1 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 25672 26067 . - . GCA_005502385.1_00221_gene GCA_005502385.1_00221 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MLNKIVIVGRMTKDAKIYDNEEVKIATFSVATERNYKDENDEIACDYIFCKAFGKMASNIEKYTSQGSLVGITGQMRSRKYEKEKQTHFVTELYVETIKFMSPKLNNEKLSDSSLNTDTYPFDNLELMNIK . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 25672 26067 . - . GCA_005502385.1_00221_mRNA GCA_005502385.1_00221 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MLNKIVIVGRMTKDAKIYDNEEVKIATFSVATERNYKDENDEIACDYIFCKAFGKMASNIEKYTSQGSLVGITGQMRSRKYEKEKQTHFVTELYVETIKFMSPKLNNEKLSDSSLNTDTYPFDNLELMNIK . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 25672 26067 . - 0 GCA_005502385.1_00221 GCA_005502385.1_00221_gene,GCA_005502385.1_00221_mRNA GCA_005502385.1_00221 Single-stranded DNA-binding protein B GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MLNKIVIVGRMTKDAKIYDNEEVKIATFSVATERNYKDENDEIACDYIFCKAFGKMASNIEKYTSQGSLVGITGQMRSRKYEKEKQTHFVTELYVETIKFMSPKLNNEKLSDSSLNTDTYPFDNLELMNIK persistent 131 Single-stranded DNA-binding protein WP_017175139.1 UPI0002E6C4D1 UniRef100_A0A4Q9WQW6,UniRef50_Q8CNK0,UniRef90_A0A4Q9WQW6 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 26261 26701 . + . GCA_005502385.1_00222_gene GCA_005502385.1_00222 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKTFKAVRFQIVSDDNRISEFELYDGVIINKENSGTGWLLEIVISDTHYDIMQKFYESQTVLDIRVVITRPSNDPALFDATIKHISLFERKISIIFECHIYTHRQVYAETLLEQLIDEGLSGEELKITFNRMMQSKPKLKEEKFER . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 26261 26701 . + . GCA_005502385.1_00222_mRNA GCA_005502385.1_00222 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKTFKAVRFQIVSDDNRISEFELYDGVIINKENSGTGWLLEIVISDTHYDIMQKFYESQTVLDIRVVITRPSNDPALFDATIKHISLFERKISIIFECHIYTHRQVYAETLLEQLIDEGLSGEELKITFNRMMQSKPKLKEEKFER . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 26261 26701 . + 0 GCA_005502385.1_00222 GCA_005502385.1_00222_gene,GCA_005502385.1_00222_mRNA GCA_005502385.1_00222 hypothetical protein GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKTFKAVRFQIVSDDNRISEFELYDGVIINKENSGTGWLLEIVISDTHYDIMQKFYESQTVLDIRVVITRPSNDPALFDATIKHISLFERKISIIFECHIYTHRQVYAETLLEQLIDEGLSGEELKITFNRMMQSKPKLKEEKFER persistent 146 ywpF YwpF protein WP_017175138.1 UPI00030A850C UniRef100_UPI00030A850C,UniRef50_Q2FWF6,UniRef90_A0A974KX04 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 26751 27188 . - . GCA_005502385.1_00223_gene GCA_005502385.1_00223 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 METIFDYNEIKKIIPHRQPFLLIDRIVEYEEGKRCVGLKQVSGNEPFFQGHFPDYAVMPGVLITEALAQTGAVAMLNSEENKGKIALFAGIDKCRFKKQVTPGDTLMLEVEITKIKGPIGKGTAKATVDGQLACSCELTFAIQDA . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 26751 27188 . - . GCA_005502385.1_00223_mRNA GCA_005502385.1_00223 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 METIFDYNEIKKIIPHRQPFLLIDRIVEYEEGKRCVGLKQVSGNEPFFQGHFPDYAVMPGVLITEALAQTGAVAMLNSEENKGKIALFAGIDKCRFKKQVTPGDTLMLEVEITKIKGPIGKGTAKATVDGQLACSCELTFAIQDA . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 26751 27188 . - 0 GCA_005502385.1_00223 GCA_005502385.1_00223_gene,GCA_005502385.1_00223_mRNA GCA_005502385.1_00223 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 METIFDYNEIKKIIPHRQPFLLIDRIVEYEEGKRCVGLKQVSGNEPFFQGHFPDYAVMPGVLITEALAQTGAVAMLNSEENKGKIALFAGIDKCRFKKQVTPGDTLMLEVEITKIKGPIGKGTAKATVDGQLACSCELTFAIQDA persistent 145 fabZ 3-hydroxyacyl-ACP dehydratase FabZ 4.2.1.59 GO:0005737,GO:0006633,GO:0009245,GO:0016020,GO:0019171 COG0764,I WP_002448673.1 UPI00019FC53B UniRef100_A0A1L8Y5Q9,UniRef50_Q2FWF5,UniRef90_Q5HMC3 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 27216 28481 . - . GCA_005502385.1_00224_gene GCA_005502385.1_00224 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MDKIIINGGNRLTGEVQVEGAKNAVLPVLTASLLASEGQSKLTNVPDLSDVVTINNVLSTLNAKVDYDKENGSVTVDASATLNEEAPYEYVSKMRASVLVMGPLLARLGHAIVALPGGCAIGARPIEQHIKGFEALGAEIHLENGNIYASTKEGLKGANIHLDFPSVGATQNIIMGASLAQGKTVIENVAKEPEIVDLANYINEMGGNVVGAGTDTITIHGVEKLTGVEHAIIPDRIEAGTLIIAAAITRGDVFVKGAVKEHMTSLIYKLEEMGVNLDFNEEGVHVTTNGELQPVDIKTLPHPGFPTDMQSQMMALLLTAEGHKVVTETVFENRFMHVAEFRRMNANINVEGRSAKIEGKSQLQGAQVKATDLRAAAALILAGLVAEGTTQVTELKHLDRGYVNFHEKLKSLGADIKRVDD . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 27216 28481 . - . GCA_005502385.1_00224_mRNA GCA_005502385.1_00224 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MDKIIINGGNRLTGEVQVEGAKNAVLPVLTASLLASEGQSKLTNVPDLSDVVTINNVLSTLNAKVDYDKENGSVTVDASATLNEEAPYEYVSKMRASVLVMGPLLARLGHAIVALPGGCAIGARPIEQHIKGFEALGAEIHLENGNIYASTKEGLKGANIHLDFPSVGATQNIIMGASLAQGKTVIENVAKEPEIVDLANYINEMGGNVVGAGTDTITIHGVEKLTGVEHAIIPDRIEAGTLIIAAAITRGDVFVKGAVKEHMTSLIYKLEEMGVNLDFNEEGVHVTTNGELQPVDIKTLPHPGFPTDMQSQMMALLLTAEGHKVVTETVFENRFMHVAEFRRMNANINVEGRSAKIEGKSQLQGAQVKATDLRAAAALILAGLVAEGTTQVTELKHLDRGYVNFHEKLKSLGADIKRVDD . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 27216 28481 . - 0 GCA_005502385.1_00224 GCA_005502385.1_00224_gene,GCA_005502385.1_00224_mRNA GCA_005502385.1_00224 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MDKIIINGGNRLTGEVQVEGAKNAVLPVLTASLLASEGQSKLTNVPDLSDVVTINNVLSTLNAKVDYDKENGSVTVDASATLNEEAPYEYVSKMRASVLVMGPLLARLGHAIVALPGGCAIGARPIEQHIKGFEALGAEIHLENGNIYASTKEGLKGANIHLDFPSVGATQNIIMGASLAQGKTVIENVAKEPEIVDLANYINEMGGNVVGAGTDTITIHGVEKLTGVEHAIIPDRIEAGTLIIAAAITRGDVFVKGAVKEHMTSLIYKLEEMGVNLDFNEEGVHVTTNGELQPVDIKTLPHPGFPTDMQSQMMALLLTAEGHKVVTETVFENRFMHVAEFRRMNANINVEGRSAKIEGKSQLQGAQVKATDLRAAAALILAGLVAEGTTQVTELKHLDRGYVNFHEKLKSLGADIKRVDD persistent 421 murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2.5.1.7 GO:0005737,GO:0008360,GO:0008760,GO:0009252,GO:0019277,GO:0051301,GO:0071555 COG0766,M WP_017175137.1 UPI000318B75F UniRef100_A0A8X8KL63,UniRef50_P33986,UniRef90_Q4L7Y1 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 28588 28818 . - . GCA_005502385.1_00225_gene GCA_005502385.1_00225 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MEYVGQFAIIHLFLHVICICIAYWALHSLRLDQFFKKGYSTQLQVCMIFLAILMGTAVSNFIVDLLQYSTQIKYLF . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 28588 28818 . - . GCA_005502385.1_00225_mRNA GCA_005502385.1_00225 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MEYVGQFAIIHLFLHVICICIAYWALHSLRLDQFFKKGYSTQLQVCMIFLAILMGTAVSNFIVDLLQYSTQIKYLF . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 28588 28818 . - 0 GCA_005502385.1_00225 GCA_005502385.1_00225_gene,GCA_005502385.1_00225_mRNA GCA_005502385.1_00225 hypothetical protein GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MEYVGQFAIIHLFLHVICICIAYWALHSLRLDQFFKKGYSTQLQVCMIFLAILMGTAVSNFIVDLLQYSTQIKYLF persistent 76 DUF1146 domain-containing protein WP_017175136.1 UPI000304308B UniRef100_A0A4Q9WNS6,UniRef50_Q2FWF3,UniRef90_A0A974KWY3 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 29132 29533 . - . GCA_005502385.1_00226_gene GCA_005502385.1_00226 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNTVNLDIVTPNGSVYEKDDVELVVFQTTAGEIGIMSGHIPTVAALKIGHIKVKFKNGTEYIAVSGGFVEIRQHKVSVIVQTAETASEIDVERAKLARQRAQSHLDEEDNSDINRAKRALARAENRLRVAELK . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 29132 29533 . - . GCA_005502385.1_00226_mRNA GCA_005502385.1_00226 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNTVNLDIVTPNGSVYEKDDVELVVFQTTAGEIGIMSGHIPTVAALKIGHIKVKFKNGTEYIAVSGGFVEIRQHKVSVIVQTAETASEIDVERAKLARQRAQSHLDEEDNSDINRAKRALARAENRLRVAELK . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 29132 29533 . - 0 GCA_005502385.1_00226 GCA_005502385.1_00226_gene,GCA_005502385.1_00226_mRNA GCA_005502385.1_00226 ATP synthase epsilon chain GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MNTVNLDIVTPNGSVYEKDDVELVVFQTTAGEIGIMSGHIPTVAALKIGHIKVKFKNGTEYIAVSGGFVEIRQHKVSVIVQTAETASEIDVERAKLARQRAQSHLDEEDNSDINRAKRALARAENRLRVAELK persistent 133 atpC F0F1 ATP synthase subunit epsilon 7.1.2.2 GO:0005524,GO:0005886,GO:0015986,GO:0045261,GO:0046933 C,COG0355 WP_002448708.1 UPI00019FC538 UniRef100_A0A1L8Y5Q3,UniRef50_Q8CNJ8,UniRef90_Q4L7Y3 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 29555 30967 . - . GCA_005502385.1_00227_gene GCA_005502385.1_00227 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MGNGRVTQVMGPVIDVRFEHNEVPEINNALIIEVPKNDGTFKLTLEVALQLGDDVVRTIAMDSTDGVQRGMQVVNTGKDISVPVGEETLGRVFNVLGETIDLNEKIDSSVRRDPIHRRQPNFDELSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYEMSDSGVINKTAMVFGQMNEPPGARMRVALSALTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTNKGSVTSIQAVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVAREVQSTLQKYRELQDIIAILGMDELSEEDKLTVERARRIQFFLSQNFHVAEQFTGQKGSYVPVKTTVADFKDILNGKYDHIPEDAFRLVGSMDDVIAKAKDMGVEV . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 29555 30967 . - . GCA_005502385.1_00227_mRNA GCA_005502385.1_00227 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MGNGRVTQVMGPVIDVRFEHNEVPEINNALIIEVPKNDGTFKLTLEVALQLGDDVVRTIAMDSTDGVQRGMQVVNTGKDISVPVGEETLGRVFNVLGETIDLNEKIDSSVRRDPIHRRQPNFDELSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYEMSDSGVINKTAMVFGQMNEPPGARMRVALSALTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTNKGSVTSIQAVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVAREVQSTLQKYRELQDIIAILGMDELSEEDKLTVERARRIQFFLSQNFHVAEQFTGQKGSYVPVKTTVADFKDILNGKYDHIPEDAFRLVGSMDDVIAKAKDMGVEV . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 29555 30967 . - 0 GCA_005502385.1_00227 GCA_005502385.1_00227_gene,GCA_005502385.1_00227_mRNA GCA_005502385.1_00227 ATP synthase subunit beta GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MGNGRVTQVMGPVIDVRFEHNEVPEINNALIIEVPKNDGTFKLTLEVALQLGDDVVRTIAMDSTDGVQRGMQVVNTGKDISVPVGEETLGRVFNVLGETIDLNEKIDSSVRRDPIHRRQPNFDELSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYEMSDSGVINKTAMVFGQMNEPPGARMRVALSALTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTNKGSVTSIQAVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVAREVQSTLQKYRELQDIIAILGMDELSEEDKLTVERARRIQFFLSQNFHVAEQFTGQKGSYVPVKTTVADFKDILNGKYDHIPEDAFRLVGSMDDVIAKAKDMGVEV persistent 470 atpD F0F1 ATP synthase subunit beta 7.1.2.2 GO:0015986,GO:0045261,GO:0046933 WP_017175135.1 UPI0002F0487F UniRef100_A0A4Q9WPK5,UniRef50_P06541,UniRef90_A0A4Q9WPK5 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 30989 31855 . - . GCA_005502385.1_00228_gene GCA_005502385.1_00228 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MASLKEIDSRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFEPYMEKMQDAITAIAGASKNSSHPMLRPRHIQRSGYLVITSDKGLAGAYSSNVLKRLVNDIKEKHTNSDEYSIIVLGQSGVDFLKNRGYEVESSLVDVPDQPSFKSIQAIAKHAIDLFSEEHIDELKIYYSHYVSVLENKPSVKQVLPLSQEDSSQGQGQMSSYEFEPDKDSILRVILPQYVESLIYGTILDAKASEHAARMTAMKNASDNATELIDDLSLQYNRARQAEITQQITEIVGGSAALE . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 30989 31855 . - . GCA_005502385.1_00228_mRNA GCA_005502385.1_00228 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MASLKEIDSRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFEPYMEKMQDAITAIAGASKNSSHPMLRPRHIQRSGYLVITSDKGLAGAYSSNVLKRLVNDIKEKHTNSDEYSIIVLGQSGVDFLKNRGYEVESSLVDVPDQPSFKSIQAIAKHAIDLFSEEHIDELKIYYSHYVSVLENKPSVKQVLPLSQEDSSQGQGQMSSYEFEPDKDSILRVILPQYVESLIYGTILDAKASEHAARMTAMKNASDNATELIDDLSLQYNRARQAEITQQITEIVGGSAALE . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 30989 31855 . - 0 GCA_005502385.1_00228 GCA_005502385.1_00228_gene,GCA_005502385.1_00228_mRNA GCA_005502385.1_00228 ATP synthase gamma chain GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MASLKEIDSRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFEPYMEKMQDAITAIAGASKNSSHPMLRPRHIQRSGYLVITSDKGLAGAYSSNVLKRLVNDIKEKHTNSDEYSIIVLGQSGVDFLKNRGYEVESSLVDVPDQPSFKSIQAIAKHAIDLFSEEHIDELKIYYSHYVSVLENKPSVKQVLPLSQEDSSQGQGQMSSYEFEPDKDSILRVILPQYVESLIYGTILDAKASEHAARMTAMKNASDNATELIDDLSLQYNRARQAEITQQITEIVGGSAALE persistent 288 atpG ATP synthase F1 subunit gamma 7.1.2.2 GO:0005524,GO:0005886,GO:0015986,GO:0042777,GO:0045261,GO:0046933 C,COG0224 WP_017175134.1 UPI000319983F UniRef100_A0A4V2KX13,UniRef50_Q49Z51,UniRef90_Q4L7Y5 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 31887 33395 . - . GCA_005502385.1_00229_gene GCA_005502385.1_00229 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MAIKAEEISALLRSQIENYESEMSVDDVGTVLQIGDGIALIHGLNDCMAGELVEFSNGVLGLAQNLEESNVGVVILGPYSEIREGDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPINSTKTRPVEQKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIGIDTILNQKGLDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAAEPAPLLYIAPYSGVTMGEEFMFNGKNVLVVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDALGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSRVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFGSDLDEYTARKLERGKRTVEVLKQDQNKPLPVENQVLIIYALTKGYLDDIPVEDITRFEDELNSWSKSNASELLGEIRETGNLPDDAKFESAINEFKKSFSKSE . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 31887 33395 . - . GCA_005502385.1_00229_mRNA GCA_005502385.1_00229 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MAIKAEEISALLRSQIENYESEMSVDDVGTVLQIGDGIALIHGLNDCMAGELVEFSNGVLGLAQNLEESNVGVVILGPYSEIREGDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPINSTKTRPVEQKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIGIDTILNQKGLDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAAEPAPLLYIAPYSGVTMGEEFMFNGKNVLVVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDALGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSRVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFGSDLDEYTARKLERGKRTVEVLKQDQNKPLPVENQVLIIYALTKGYLDDIPVEDITRFEDELNSWSKSNASELLGEIRETGNLPDDAKFESAINEFKKSFSKSE . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 31887 33395 . - 0 GCA_005502385.1_00229 GCA_005502385.1_00229_gene,GCA_005502385.1_00229_mRNA GCA_005502385.1_00229 ATP synthase subunit alpha GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MAIKAEEISALLRSQIENYESEMSVDDVGTVLQIGDGIALIHGLNDCMAGELVEFSNGVLGLAQNLEESNVGVVILGPYSEIREGDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPINSTKTRPVEQKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIGIDTILNQKGLDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAAEPAPLLYIAPYSGVTMGEEFMFNGKNVLVVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDALGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSRVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFGSDLDEYTARKLERGKRTVEVLKQDQNKPLPVENQVLIIYALTKGYLDDIPVEDITRFEDELNSWSKSNASELLGEIRETGNLPDDAKFESAINEFKKSFSKSE persistent 502 atpA F0F1 ATP synthase subunit alpha 7.1.2.2 GO:0005524,GO:0005886,GO:0015986,GO:0043531,GO:0045261,GO:0046933,GO:0046961 C,COG0056 WP_017175133.1 UPI000319973D UniRef100_A0A4Q9WNS9,UniRef50_P26679,UniRef90_Q2FWE8 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 33414 33953 . - . GCA_005502385.1_00230_gene GCA_005502385.1_00230 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MADVAKKYAKALFDVSIDKDRLDLMYEELQEVSHATLNYIDDLKAIDSNPNQPASERRKFAGIVFGDANYYLKNMLMILANNRHLALIHSIFKEFKHLYDHHYNQGDALVESVYQLNEEELSRIERVILNKTKLSKVHITTKINPNLIGGFRAKVGTTVLDGSIKNDLEQIERKFKRVN . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 33414 33953 . - . GCA_005502385.1_00230_mRNA GCA_005502385.1_00230 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MADVAKKYAKALFDVSIDKDRLDLMYEELQEVSHATLNYIDDLKAIDSNPNQPASERRKFAGIVFGDANYYLKNMLMILANNRHLALIHSIFKEFKHLYDHHYNQGDALVESVYQLNEEELSRIERVILNKTKLSKVHITTKINPNLIGGFRAKVGTTVLDGSIKNDLEQIERKFKRVN . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 33414 33953 . - 0 GCA_005502385.1_00230 GCA_005502385.1_00230_gene,GCA_005502385.1_00230_mRNA GCA_005502385.1_00230 ATP synthase subunit delta GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MADVAKKYAKALFDVSIDKDRLDLMYEELQEVSHATLNYIDDLKAIDSNPNQPASERRKFAGIVFGDANYYLKNMLMILANNRHLALIHSIFKEFKHLYDHHYNQGDALVESVYQLNEEELSRIERVILNKTKLSKVHITTKINPNLIGGFRAKVGTTVLDGSIKNDLEQIERKFKRVN persistent 179 F0F1 ATP synthase subunit delta 7.1.2.2 WP_017175132.1 UPI000305003C UniRef100_A0A4Q9WNS0,UniRef50_Q2FWE7,UniRef90_A0A4Q9WNS0 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 33953 34483 . - . GCA_005502385.1_00231_gene GCA_005502385.1_00231 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MPVNALTNSFVLGATTGGVEWGTTIVTIITFIILLALLKKFAWGPLKEVMDKRERDINRDIDEAEEAKLNAQKLEEENKKTLKETQDEVHHILEDARIQARKQHEEIIKDAHERANGMIETAQSEINSEKERALADINNQVSELSVLIASKVLQKEISEQDQKGLVDKYLKEAGDK . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 33953 34483 . - . GCA_005502385.1_00231_mRNA GCA_005502385.1_00231 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MPVNALTNSFVLGATTGGVEWGTTIVTIITFIILLALLKKFAWGPLKEVMDKRERDINRDIDEAEEAKLNAQKLEEENKKTLKETQDEVHHILEDARIQARKQHEEIIKDAHERANGMIETAQSEINSEKERALADINNQVSELSVLIASKVLQKEISEQDQKGLVDKYLKEAGDK . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 33953 34483 . - 0 GCA_005502385.1_00231 GCA_005502385.1_00231_gene,GCA_005502385.1_00231_mRNA GCA_005502385.1_00231 ATP synthase subunit b GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MPVNALTNSFVLGATTGGVEWGTTIVTIITFIILLALLKKFAWGPLKEVMDKRERDINRDIDEAEEAKLNAQKLEEENKKTLKETQDEVHHILEDARIQARKQHEEIIKDAHERANGMIETAQSEINSEKERALADINNQVSELSVLIASKVLQKEISEQDQKGLVDKYLKEAGDK persistent 176 atpF F0F1 ATP synthase subunit B GO:0005886,GO:0045263,GO:0046933,GO:0046961 C,COG0711 WP_017175131.1 UPI00030289F4 UniRef100_A0A4Q9WQX6,UniRef50_Q49Z54,UniRef90_Q4L7Y8 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 34570 34782 . - . GCA_005502385.1_00232_gene GCA_005502385.1_00232 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MGLIAAAIAIGLSALGAGIGNGLIVSRTVEGVARQPEARGQLMSIMFIGIGLVEALPIIGVVISFMTLFR . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 34570 34782 . - . GCA_005502385.1_00232_mRNA GCA_005502385.1_00232 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MGLIAAAIAIGLSALGAGIGNGLIVSRTVEGVARQPEARGQLMSIMFIGIGLVEALPIIGVVISFMTLFR . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 34570 34782 . - 0 GCA_005502385.1_00232 GCA_005502385.1_00232_gene,GCA_005502385.1_00232_mRNA GCA_005502385.1_00232 ATP synthase subunit c GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MGLIAAAIAIGLSALGAGIGNGLIVSRTVEGVARQPEARGQLMSIMFIGIGLVEALPIIGVVISFMTLFR persistent 70 atpE F0F1 ATP synthase subunit C 7.1.2.2 GO:0005886,GO:0008289,GO:0015078,GO:0015986,GO:0045263,GO:0046933 C,COG0636 WP_002448651.1 UPI00019FC532 UniRef100_A0A380FYJ3,UniRef50_P37815,UniRef90_B9DME9 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 34815 35540 . - . GCA_005502385.1_00233_gene GCA_005502385.1_00233 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MDHKSPLVSWNVFGFDIVFNLASIMMLIITAIIVFIIAIVCTRNLKKRPSGKQNFIEWIFDFVRGIIESNMAWKKGGQFHFLAVTLILFIFVANMLGLPFAIVTHDHYLWWKSPTADATVTLTLSTMMILLTHYYGVKMRGTKAYVGNYFKPFWPLAIINVFEEFSSTLTLGLRLYGNIFAGELLLSLLAGLFFQNGWGWIISIPGLIIWQGFSIFVGTIQAYIFIMLSMVYMSHKVADAH . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 34815 35540 . - . GCA_005502385.1_00233_mRNA GCA_005502385.1_00233 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MDHKSPLVSWNVFGFDIVFNLASIMMLIITAIIVFIIAIVCTRNLKKRPSGKQNFIEWIFDFVRGIIESNMAWKKGGQFHFLAVTLILFIFVANMLGLPFAIVTHDHYLWWKSPTADATVTLTLSTMMILLTHYYGVKMRGTKAYVGNYFKPFWPLAIINVFEEFSSTLTLGLRLYGNIFAGELLLSLLAGLFFQNGWGWIISIPGLIIWQGFSIFVGTIQAYIFIMLSMVYMSHKVADAH . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 34815 35540 . - 0 GCA_005502385.1_00233 GCA_005502385.1_00233_gene,GCA_005502385.1_00233_mRNA GCA_005502385.1_00233 ATP synthase subunit a GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MDHKSPLVSWNVFGFDIVFNLASIMMLIITAIIVFIIAIVCTRNLKKRPSGKQNFIEWIFDFVRGIIESNMAWKKGGQFHFLAVTLILFIFVANMLGLPFAIVTHDHYLWWKSPTADATVTLTLSTMMILLTHYYGVKMRGTKAYVGNYFKPFWPLAIINVFEEFSSTLTLGLRLYGNIFAGELLLSLLAGLFFQNGWGWIISIPGLIIWQGFSIFVGTIQAYIFIMLSMVYMSHKVADAH persistent 241 atpB F0F1 ATP synthase subunit A 7.1.2.2 GO:0005886,GO:0015078,GO:0015986,GO:0042777,GO:0045263,GO:0046933 C,COG0356 WP_002448665.1 UPI00019FC531 UniRef100_A0A1L8Y5S2,UniRef50_Q2G2F4,UniRef90_Q4L7Z0 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 35569 35916 . - . GCA_005502385.1_00234_gene GCA_005502385.1_00234 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKRFSIIFRQFIQYYIYFLILLSILYFIKSNSFLLGLIIGTLGSLINTYIFEIYLSRAKQPDNIHISTGNVWRYLVAIIACIVWVVFKENVNIIGIMIGLMISYVLIIFRPLLLK . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 35569 35916 . - . GCA_005502385.1_00234_mRNA GCA_005502385.1_00234 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKRFSIIFRQFIQYYIYFLILLSILYFIKSNSFLLGLIIGTLGSLINTYIFEIYLSRAKQPDNIHISTGNVWRYLVAIIACIVWVVFKENVNIIGIMIGLMISYVLIIFRPLLLK . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 35569 35916 . - 0 GCA_005502385.1_00234 GCA_005502385.1_00234_gene,GCA_005502385.1_00234_mRNA GCA_005502385.1_00234 hypothetical protein GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKRFSIIFRQFIQYYIYFLILLSILYFIKSNSFLLGLIIGTLGSLINTYIFEIYLSRAKQPDNIHISTGNVWRYLVAIIACIVWVVFKENVNIIGIMIGLMISYVLIIFRPLLLK persistent 115 ATP-binding protein WP_017175130.1 UPI000370DAB3 UniRef100_A0A4Q9WQ19,UniRef50_S2Y935,UniRef90_A0A6N0I1J0 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 36064 37209 . - . GCA_005502385.1_00235_gene GCA_005502385.1_00235 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MRKIMTVFGTRPEAIKMAPLVKALEKDSMLEPIIVVTAQHREMLDSVLKTFNIKPHYDLNIMKKGQTLSEITAKSIIQLEQIMKKECPDMVLVHGDTTTTFSGALAAFYNHTSVGHVEAGLRSGNKYAPFPEEINRQMVSNIADLHFVPTIGAKRNLIQENKDKTSIVITGNTAIDTLNFTINKNYTSELIEKHKNKKIVLLTVHRRENIGKPMEHIFKAVRDIVEDIEDVVVVFPLHMNPEVRKLSYAYLENHPRIELIEPLDVVDFHNFANHAYLILTDSGGIQEEAPSLNKPVLVLRDVTERPEGVEAGTLKVIGTEYTHVYQEIRKLLKNKQVYNNMAYAQNPYGDGKASERICDSIKYYLGLTEEIPKEFEKLKNC . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 36064 37209 . - . GCA_005502385.1_00235_mRNA GCA_005502385.1_00235 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MRKIMTVFGTRPEAIKMAPLVKALEKDSMLEPIIVVTAQHREMLDSVLKTFNIKPHYDLNIMKKGQTLSEITAKSIIQLEQIMKKECPDMVLVHGDTTTTFSGALAAFYNHTSVGHVEAGLRSGNKYAPFPEEINRQMVSNIADLHFVPTIGAKRNLIQENKDKTSIVITGNTAIDTLNFTINKNYTSELIEKHKNKKIVLLTVHRRENIGKPMEHIFKAVRDIVEDIEDVVVVFPLHMNPEVRKLSYAYLENHPRIELIEPLDVVDFHNFANHAYLILTDSGGIQEEAPSLNKPVLVLRDVTERPEGVEAGTLKVIGTEYTHVYQEIRKLLKNKQVYNNMAYAQNPYGDGKASERICDSIKYYLGLTEEIPKEFEKLKNC . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 36064 37209 . - 0 GCA_005502385.1_00235 GCA_005502385.1_00235_gene,GCA_005502385.1_00235_mRNA GCA_005502385.1_00235 UDP-N-acetylglucosamine 2-epimerase GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MRKIMTVFGTRPEAIKMAPLVKALEKDSMLEPIIVVTAQHREMLDSVLKTFNIKPHYDLNIMKKGQTLSEITAKSIIQLEQIMKKECPDMVLVHGDTTTTFSGALAAFYNHTSVGHVEAGLRSGNKYAPFPEEINRQMVSNIADLHFVPTIGAKRNLIQENKDKTSIVITGNTAIDTLNFTINKNYTSELIEKHKNKKIVLLTVHRRENIGKPMEHIFKAVRDIVEDIEDVVVVFPLHMNPEVRKLSYAYLENHPRIELIEPLDVVDFHNFANHAYLILTDSGGIQEEAPSLNKPVLVLRDVTERPEGVEAGTLKVIGTEYTHVYQEIRKLLKNKQVYNNMAYAQNPYGDGKASERICDSIKYYLGLTEEIPKEFEKLKNC persistent 381 wecB non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 GO:0008761 WP_137689733.1 UPI0010F75D18 UniRef100_UPI0010F75D18,UniRef50_A0A1Y3QEC8,UniRef90_A0A4Q9WNT3 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 37229 37858 . - . GCA_005502385.1_00236_gene GCA_005502385.1_00236 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSKVHVFDHPLIQHKLSYIRDKNTGTKEFRELVDEVGMLMAYEVTRDLQLQDVEIETPVTTMTAKRLAGKKLAIVPILRAGLGMTDGVLNLVPAARVGHIGLYRDPKTLKAVEYFAKLPQDIDEREIIVVDPMLATGASAIEAINSLKNRGAKNIRFMCLIAAPEGVEKMQEAHEDVDIYIAALDEKLNEKAYITPGLGDAGDRLFGTK . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 37229 37858 . - . GCA_005502385.1_00236_mRNA GCA_005502385.1_00236 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSKVHVFDHPLIQHKLSYIRDKNTGTKEFRELVDEVGMLMAYEVTRDLQLQDVEIETPVTTMTAKRLAGKKLAIVPILRAGLGMTDGVLNLVPAARVGHIGLYRDPKTLKAVEYFAKLPQDIDEREIIVVDPMLATGASAIEAINSLKNRGAKNIRFMCLIAAPEGVEKMQEAHEDVDIYIAALDEKLNEKAYITPGLGDAGDRLFGTK . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 37229 37858 . - 0 GCA_005502385.1_00236 GCA_005502385.1_00236_gene,GCA_005502385.1_00236_mRNA GCA_005502385.1_00236 Uracil phosphoribosyltransferase GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSKVHVFDHPLIQHKLSYIRDKNTGTKEFRELVDEVGMLMAYEVTRDLQLQDVEIETPVTTMTAKRLAGKKLAIVPILRAGLGMTDGVLNLVPAARVGHIGLYRDPKTLKAVEYFAKLPQDIDEREIIVVDPMLATGASAIEAINSLKNRGAKNIRFMCLIAAPEGVEKMQEAHEDVDIYIAALDEKLNEKAYITPGLGDAGDRLFGTK persistent 209 upp uracil phosphoribosyltransferase 2.4.2.9 GO:0000287,GO:0004845,GO:0005525,GO:0006223,GO:0009116,GO:0044206 COG0035,F WP_054105567.1 UPI0006B9B9AD UniRef100_A0AAE5MYD1,UniRef50_Q9RU32,UniRef90_Q2FWE6 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 37883 39121 . - . GCA_005502385.1_00237_gene GCA_005502385.1_00237 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSYIKEQDHIIYEAIQNEYNRQNNNIELIASENFVSEAVMEAQGSVMTNKYAEGYPGRRYYGGCEYVDVTETIAIERIKALFGAEHANIQPHSGSQANMAVYLVALEMGDTVLGMNLSHGGHLTHGASVNFSGKFYNFIDYGVDKETERINYDEIRELAQKHKPKLIVAGTSAYSRQLDFKKFKEIADEVGAKLMVDMAHIAGLVATGLHPNPVEYADFVTSTTHKTLRGPRGGLILCKEKYKKEIDKTIFPGIQGGPLEHVIAAKAVAFGEALEPDFKVYQEQVIKNAKTLAETLQNEGFRIVSGGTDNHLISVDVKQSVNLTGKQAEETLDSIGITCNKNTIPFDQEKPFVTSGIRLGTPAATTRGFDEVAFKEVALIISTALKNSNDQAKLKEASDRVKQLTQQYPLYE . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 37883 39121 . - . GCA_005502385.1_00237_mRNA GCA_005502385.1_00237 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSYIKEQDHIIYEAIQNEYNRQNNNIELIASENFVSEAVMEAQGSVMTNKYAEGYPGRRYYGGCEYVDVTETIAIERIKALFGAEHANIQPHSGSQANMAVYLVALEMGDTVLGMNLSHGGHLTHGASVNFSGKFYNFIDYGVDKETERINYDEIRELAQKHKPKLIVAGTSAYSRQLDFKKFKEIADEVGAKLMVDMAHIAGLVATGLHPNPVEYADFVTSTTHKTLRGPRGGLILCKEKYKKEIDKTIFPGIQGGPLEHVIAAKAVAFGEALEPDFKVYQEQVIKNAKTLAETLQNEGFRIVSGGTDNHLISVDVKQSVNLTGKQAEETLDSIGITCNKNTIPFDQEKPFVTSGIRLGTPAATTRGFDEVAFKEVALIISTALKNSNDQAKLKEASDRVKQLTQQYPLYE . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 37883 39121 . - 0 GCA_005502385.1_00237 GCA_005502385.1_00237_gene,GCA_005502385.1_00237_mRNA GCA_005502385.1_00237 Serine hydroxymethyltransferase GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSYIKEQDHIIYEAIQNEYNRQNNNIELIASENFVSEAVMEAQGSVMTNKYAEGYPGRRYYGGCEYVDVTETIAIERIKALFGAEHANIQPHSGSQANMAVYLVALEMGDTVLGMNLSHGGHLTHGASVNFSGKFYNFIDYGVDKETERINYDEIRELAQKHKPKLIVAGTSAYSRQLDFKKFKEIADEVGAKLMVDMAHIAGLVATGLHPNPVEYADFVTSTTHKTLRGPRGGLILCKEKYKKEIDKTIFPGIQGGPLEHVIAAKAVAFGEALEPDFKVYQEQVIKNAKTLAETLQNEGFRIVSGGTDNHLISVDVKQSVNLTGKQAEETLDSIGITCNKNTIPFDQEKPFVTSGIRLGTPAATTRGFDEVAFKEVALIISTALKNSNDQAKLKEASDRVKQLTQQYPLYE persistent 412 Serine hydroxymethyltransferase 2.1.2.1 UniRef50_P9WGI9,UniRef90_A0A6B8SGJ7 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 39146 39670 . - . GCA_005502385.1_00238_gene GCA_005502385.1_00238 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MQELTTLLDELKTQSFFKKDEICVIGCSTSEVIGEKIGSVGSMEVAETIFNELERIKRETGVSFAFQGCEHINRAITIEREDYNPFTMEEVTVVPDVHAGGSLATYAYQHMKDPIVIEYIKVPKGIDIGQTLIGMHINHVCVPLRTSVKKVGEATVTIATSRPKKIGGERAKYE . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 39146 39670 . - . GCA_005502385.1_00238_mRNA GCA_005502385.1_00238 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MQELTTLLDELKTQSFFKKDEICVIGCSTSEVIGEKIGSVGSMEVAETIFNELERIKRETGVSFAFQGCEHINRAITIEREDYNPFTMEEVTVVPDVHAGGSLATYAYQHMKDPIVIEYIKVPKGIDIGQTLIGMHINHVCVPLRTSVKKVGEATVTIATSRPKKIGGERAKYE . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 39146 39670 . - 0 GCA_005502385.1_00238 GCA_005502385.1_00238_gene,GCA_005502385.1_00238_mRNA GCA_005502385.1_00238 hypothetical protein UPF0340 protein YwlG GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MQELTTLLDELKTQSFFKKDEICVIGCSTSEVIGEKIGSVGSMEVAETIFNELERIKRETGVSFAFQGCEHINRAITIEREDYNPFTMEEVTVVPDVHAGGSLATYAYQHMKDPIVIEYIKVPKGIDIGQTLIGMHINHVCVPLRTSVKKVGEATVTIATSRPKKIGGERAKYE persistent 174 UPF0340 protein BUZ51_08475 WP_019835610.1 UPI00036644B0 UniRef100_UPI00036644B0,UniRef50_Q2FWE4,UniRef90_A0A657ZQS0 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 39780 40196 . - . GCA_005502385.1_00239_gene GCA_005502385.1_00239 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKIIFVCTGNTCRSPIAESIATVLLPNDSIQSRGLFAMNGQSITPEALEVILENNLPEPSVSQIFSQDDLKSDLILTMTNSHKRQLISQFGTEYPIYTLCEYVSETGEIDDPFGGSIDTYRHTFNQLYSLISKLKHEE . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 39780 40196 . - . GCA_005502385.1_00239_mRNA GCA_005502385.1_00239 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKIIFVCTGNTCRSPIAESIATVLLPNDSIQSRGLFAMNGQSITPEALEVILENNLPEPSVSQIFSQDDLKSDLILTMTNSHKRQLISQFGTEYPIYTLCEYVSETGEIDDPFGGSIDTYRHTFNQLYSLISKLKHEE . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 39780 40196 . - 0 GCA_005502385.1_00239 GCA_005502385.1_00239_gene,GCA_005502385.1_00239_mRNA GCA_005502385.1_00239 Low molecular weight protein-tyrosine-phosphatase PtpB GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKIIFVCTGNTCRSPIAESIATVLLPNDSIQSRGLFAMNGQSITPEALEVILENNLPEPSVSQIFSQDDLKSDLILTMTNSHKRQLISQFGTEYPIYTLCEYVSETGEIDDPFGGSIDTYRHTFNQLYSLISKLKHEE persistent 138 ptpB Low molecular weight protein-tyrosine-phosphatase PtpB UniRef50_A0A4Q9WNT8,UniRef90_A0A4Q9WNT8 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 40193 41299 . - . GCA_005502385.1_00240_gene GCA_005502385.1_00240 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MYYFLTHFFFFNNFTYVKGVIKVKTNIWNMKDYSQDPHTFSQLAEIKTIYENGGLIAIPTETVYGLGANAINEQAVENIYKAKGRPSDNPLIVHIYKQSQMDAFVSTIPKEAKKLMNAFWPGPISFILPLKQGYLCEKVTGGLNSIAVRMPSHPIGRAILEYVDLPIAAPSANISGRPSPTTFQHVYNDLNGKIDGIVNGDQSEEGLESTVLDCTQFPFRIARPGSITQTMLNQVVPHSVIQYDYNQLERPIAPGMKYKHYAPKTPVYMLTELTQPISELNESGLAFVLPSSMKKYVPKDGIFISLCENQRDVKGANHNLYKILHDIDDDERIKKAFIYTFDNIEGSEAVMNRMLKATGNQIVKGREL . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 40193 41299 . - . GCA_005502385.1_00240_mRNA GCA_005502385.1_00240 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MYYFLTHFFFFNNFTYVKGVIKVKTNIWNMKDYSQDPHTFSQLAEIKTIYENGGLIAIPTETVYGLGANAINEQAVENIYKAKGRPSDNPLIVHIYKQSQMDAFVSTIPKEAKKLMNAFWPGPISFILPLKQGYLCEKVTGGLNSIAVRMPSHPIGRAILEYVDLPIAAPSANISGRPSPTTFQHVYNDLNGKIDGIVNGDQSEEGLESTVLDCTQFPFRIARPGSITQTMLNQVVPHSVIQYDYNQLERPIAPGMKYKHYAPKTPVYMLTELTQPISELNESGLAFVLPSSMKKYVPKDGIFISLCENQRDVKGANHNLYKILHDIDDDERIKKAFIYTFDNIEGSEAVMNRMLKATGNQIVKGREL . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 40193 41299 . - 0 GCA_005502385.1_00240 GCA_005502385.1_00240_gene,GCA_005502385.1_00240_mRNA GCA_005502385.1_00240 Threonylcarbamoyl-AMP synthase GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MYYFLTHFFFFNNFTYVKGVIKVKTNIWNMKDYSQDPHTFSQLAEIKTIYENGGLIAIPTETVYGLGANAINEQAVENIYKAKGRPSDNPLIVHIYKQSQMDAFVSTIPKEAKKLMNAFWPGPISFILPLKQGYLCEKVTGGLNSIAVRMPSHPIGRAILEYVDLPIAAPSANISGRPSPTTFQHVYNDLNGKIDGIVNGDQSEEGLESTVLDCTQFPFRIARPGSITQTMLNQVVPHSVIQYDYNQLERPIAPGMKYKHYAPKTPVYMLTELTQPISELNESGLAFVLPSSMKKYVPKDGIFISLCENQRDVKGANHNLYKILHDIDDDERIKKAFIYTFDNIEGSEAVMNRMLKATGNQIVKGREL persistent 368 L-threonylcarbamoyladenylate synthase 2.7.7.87 GO:0003725,GO:0006400,GO:0061710 UniRef50_A0A6K1LH12,UniRef90_A0A3S7GX43 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 41318 42154 . - . GCA_005502385.1_00241_gene GCA_005502385.1_00241 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MASFKDTLQEAIELTKEKGFEQSRAEWLMLDLFKWSRTDYLMHMYDEMSQAEEAKFSLALDRMLLGEPIQYIVGFQSFYGYQLQVNSQCLIPRPETEEVMLHFLEHCKDGSTIADIGTGSGAIAIVLKKLNPTLNVIATDLIEDTLEVASDNAHQLKADIRFLKGNALKPLIKENIKLDGLISNPPYIDQTEMKDMEDTVVKYEPHIALFAEDEGYEIYEMILDDLPKVLNKGAYVTFEIGYNQGEILKARIINKYPHVNVNLLKDINGLNRMISFKW . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 41318 42154 . - . GCA_005502385.1_00241_mRNA GCA_005502385.1_00241 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MASFKDTLQEAIELTKEKGFEQSRAEWLMLDLFKWSRTDYLMHMYDEMSQAEEAKFSLALDRMLLGEPIQYIVGFQSFYGYQLQVNSQCLIPRPETEEVMLHFLEHCKDGSTIADIGTGSGAIAIVLKKLNPTLNVIATDLIEDTLEVASDNAHQLKADIRFLKGNALKPLIKENIKLDGLISNPPYIDQTEMKDMEDTVVKYEPHIALFAEDEGYEIYEMILDDLPKVLNKGAYVTFEIGYNQGEILKARIINKYPHVNVNLLKDINGLNRMISFKW . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 41318 42154 . - 0 GCA_005502385.1_00241 GCA_005502385.1_00241_gene,GCA_005502385.1_00241_mRNA GCA_005502385.1_00241 Release factor glutamine methyltransferase GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MASFKDTLQEAIELTKEKGFEQSRAEWLMLDLFKWSRTDYLMHMYDEMSQAEEAKFSLALDRMLLGEPIQYIVGFQSFYGYQLQVNSQCLIPRPETEEVMLHFLEHCKDGSTIADIGTGSGAIAIVLKKLNPTLNVIATDLIEDTLEVASDNAHQLKADIRFLKGNALKPLIKENIKLDGLISNPPYIDQTEMKDMEDTVVKYEPHIALFAEDEGYEIYEMILDDLPKVLNKGAYVTFEIGYNQGEILKARIINKYPHVNVNLLKDINGLNRMISFKW persistent 278 prmC peptide chain release factor N(5)-glutamine methyltransferase 2.1.1.297 GO:0006412,GO:0008757,GO:0018364 WP_017175123.1 UPI00031C66A4 UniRef100_A0A4Q9WQY6,UniRef50_A0A0D0QVC7,UniRef90_A0A4Q9WQY6 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 42141 43217 . - . GCA_005502385.1_00242_gene GCA_005502385.1_00242 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MFDQLDIVEERYEQLNEMLSDPEIVNDPDKLRKYSKEQADLQKTVDVYRDYKSKKEEVAEIDEMLTETDDKEEIEMLKEEASGLKSELPELEEQLKFLLIPKDPNDEKDVIVEIRAAAGGDEAAIFAGDLLRMYTKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEVRNEDLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGIIATSSEKSQIQNREKALKVLKARLYDMKLQEEQQKYAAQRKSAIGTGDRSERVRTYNYPQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQTEKLKELNNGEL . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 42141 43217 . - . GCA_005502385.1_00242_mRNA GCA_005502385.1_00242 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MFDQLDIVEERYEQLNEMLSDPEIVNDPDKLRKYSKEQADLQKTVDVYRDYKSKKEEVAEIDEMLTETDDKEEIEMLKEEASGLKSELPELEEQLKFLLIPKDPNDEKDVIVEIRAAAGGDEAAIFAGDLLRMYTKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEVRNEDLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGIIATSSEKSQIQNREKALKVLKARLYDMKLQEEQQKYAAQRKSAIGTGDRSERVRTYNYPQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQTEKLKELNNGEL . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 42141 43217 . - 0 GCA_005502385.1_00242 GCA_005502385.1_00242_gene,GCA_005502385.1_00242_mRNA GCA_005502385.1_00242 Peptide chain release factor 1 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MFDQLDIVEERYEQLNEMLSDPEIVNDPDKLRKYSKEQADLQKTVDVYRDYKSKKEEVAEIDEMLTETDDKEEIEMLKEEASGLKSELPELEEQLKFLLIPKDPNDEKDVIVEIRAAAGGDEAAIFAGDLLRMYTKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEVRNEDLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGIIATSSEKSQIQNREKALKVLKARLYDMKLQEEQQKYAAQRKSAIGTGDRSERVRTYNYPQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQTEKLKELNNGEL persistent 358 prfA peptide chain release factor 1 GO:0003747,GO:0006415 WP_061544548.1 UPI000778A334 UniRef100_UPI000778A334,UniRef50_B9DS45,UniRef90_A0A974KX76 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 43217 43816 . - . GCA_005502385.1_00243_gene GCA_005502385.1_00243 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MYETYHSGWIECITGSMFSGKSEELIRRLRRGIYAKQKVIVFKPAIDDRYHKEKVVSHDGNELEAINISTAREILLQNLSQFDVIGIDEIQFFDNEIVHIVEKLAEEGHRVVVAGLDMDFRGEPFDPMPQIMAVSEQVTKLQAVCAVCGSSSSRTQRLIDGQPARIDDPIILVGANESYEPRCRAHHIVAPSINDKEEI . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 43217 43816 . - . GCA_005502385.1_00243_mRNA GCA_005502385.1_00243 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MYETYHSGWIECITGSMFSGKSEELIRRLRRGIYAKQKVIVFKPAIDDRYHKEKVVSHDGNELEAINISTAREILLQNLSQFDVIGIDEIQFFDNEIVHIVEKLAEEGHRVVVAGLDMDFRGEPFDPMPQIMAVSEQVTKLQAVCAVCGSSSSRTQRLIDGQPARIDDPIILVGANESYEPRCRAHHIVAPSINDKEEI . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 43217 43816 . - 0 GCA_005502385.1_00243 GCA_005502385.1_00243_gene,GCA_005502385.1_00243_mRNA GCA_005502385.1_00243 Thymidine kinase GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MYETYHSGWIECITGSMFSGKSEELIRRLRRGIYAKQKVIVFKPAIDDRYHKEKVVSHDGNELEAINISTAREILLQNLSQFDVIGIDEIQFFDNEIVHIVEKLAEEGHRVVVAGLDMDFRGEPFDPMPQIMAVSEQVTKLQAVCAVCGSSSSRTQRLIDGQPARIDDPIILVGANESYEPRCRAHHIVAPSINDKEEI persistent 199 tdk thymidine kinase 2.7.1.21 GO:0004797,GO:0005524,GO:0005829,GO:0008270,GO:0046104,GO:0071897 COG1435,F WP_017175121.1 UPI0002E15E5C UniRef100_A0A1L8Y5S6,UniRef50_Q97F65,UniRef90_Q4L800 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 43991 44248 . - . GCA_005502385.1_00244_gene GCA_005502385.1_00244 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKQGIHPDYHKVIFLDTTTNFKFLSGSTKTSSETMEWEDGNEYPVIRLDVSSDSHPFYTGRQKFAAADGRVERFNKKFGLKSNNN . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 43991 44248 . - . GCA_005502385.1_00244_mRNA GCA_005502385.1_00244 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKQGIHPDYHKVIFLDTTTNFKFLSGSTKTSSETMEWEDGNEYPVIRLDVSSDSHPFYTGRQKFAAADGRVERFNKKFGLKSNNN . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 43991 44248 . - 0 GCA_005502385.1_00244 GCA_005502385.1_00244_gene,GCA_005502385.1_00244_mRNA GCA_005502385.1_00244 50S ribosomal protein L31 type B GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKQGIHPDYHKVIFLDTTTNFKFLSGSTKTSSETMEWEDGNEYPVIRLDVSSDSHPFYTGRQKFAAADGRVERFNKKFGLKSNNN persistent 85 rpmE2 type B 50S ribosomal protein L31 GO:0003735,GO:0005840,GO:0006412,GO:1990904 COG0254,J WP_002448672.1 UPI00019FC527 UniRef100_A0A380FX88,UniRef50_Q5HMA2,UniRef90_Q5HMA2 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 44364 45680 . - . GCA_005502385.1_00245_gene GCA_005502385.1_00245 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MPERERTSPQYESFHELYKNYTTKELTQKAKSLKLTNYSKLNKSELVLAIMEAQMEKDGNYYMEGVLDDIQPDGYGFLRTVNYSKGEKDIYISASQIRRFEIKRGDKVTGKVRKPKDNEKYYGLLQVDFVNDENAEVVKKRPHFQALTPLYPEERIILETEPQNYSTRIMDLVTPIGLGQRGLIVAPPKAGKTSLLKEIANAISTNKPDAKLFILLVGERPEEVTDIERSVESAEVVHSTFDEPPQHHVKVAELLLERAKRLVEIGQDVIILMDSITRLARAYNLVIPPSGRTLSGGLDPASLHKPKAFFGAARNIEAGGSLTILATALVDTGSRMDDMIYEEFKGTGNMELHLDRKLSERRIFPAIDIGRSSTRKEELLISKSELDSLWQLRNMFTDSTDFTERFIRKLKRSENNKEFFEQLQKAAAESTKTGKPII . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 44364 45680 . - . GCA_005502385.1_00245_mRNA GCA_005502385.1_00245 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MPERERTSPQYESFHELYKNYTTKELTQKAKSLKLTNYSKLNKSELVLAIMEAQMEKDGNYYMEGVLDDIQPDGYGFLRTVNYSKGEKDIYISASQIRRFEIKRGDKVTGKVRKPKDNEKYYGLLQVDFVNDENAEVVKKRPHFQALTPLYPEERIILETEPQNYSTRIMDLVTPIGLGQRGLIVAPPKAGKTSLLKEIANAISTNKPDAKLFILLVGERPEEVTDIERSVESAEVVHSTFDEPPQHHVKVAELLLERAKRLVEIGQDVIILMDSITRLARAYNLVIPPSGRTLSGGLDPASLHKPKAFFGAARNIEAGGSLTILATALVDTGSRMDDMIYEEFKGTGNMELHLDRKLSERRIFPAIDIGRSSTRKEELLISKSELDSLWQLRNMFTDSTDFTERFIRKLKRSENNKEFFEQLQKAAAESTKTGKPII . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 44364 45680 . - 0 GCA_005502385.1_00245 GCA_005502385.1_00245_gene,GCA_005502385.1_00245_mRNA GCA_005502385.1_00245 Transcription termination factor Rho GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MPERERTSPQYESFHELYKNYTTKELTQKAKSLKLTNYSKLNKSELVLAIMEAQMEKDGNYYMEGVLDDIQPDGYGFLRTVNYSKGEKDIYISASQIRRFEIKRGDKVTGKVRKPKDNEKYYGLLQVDFVNDENAEVVKKRPHFQALTPLYPEERIILETEPQNYSTRIMDLVTPIGLGQRGLIVAPPKAGKTSLLKEIANAISTNKPDAKLFILLVGERPEEVTDIERSVESAEVVHSTFDEPPQHHVKVAELLLERAKRLVEIGQDVIILMDSITRLARAYNLVIPPSGRTLSGGLDPASLHKPKAFFGAARNIEAGGSLTILATALVDTGSRMDDMIYEEFKGTGNMELHLDRKLSERRIFPAIDIGRSSTRKEELLISKSELDSLWQLRNMFTDSTDFTERFIRKLKRSENNKEFFEQLQKAAAESTKTGKPII persistent 438 rho transcription termination factor Rho 3.6.4.- GO:0003723,GO:0005524,GO:0006353,GO:0008186 COG1158,K WP_017175120.1 UPI000319CCB1 UniRef100_A0A1L8Y5T4,UniRef50_A0A2D6ZY33,UniRef90_A0A133PU93 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 45920 47347 . - . GCA_005502385.1_00246_gene GCA_005502385.1_00246 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MRNYTQQYINGEWIDSESNETIDVINPATEEVIGKVAKGNEKDVEKAVQAAHDVYLEFRHSSVEERKQLLDRIVEEYKNRKQDIIEAITAELGAPLTVSENVHYQMGLQHFSEARRALDSFEFEERRGDDLVTKEAIGVSGLVTPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAIILAEIFEKAGVPKGVFNLVNGDGEGVGNPLSEHPKVRMMSFTGSGATGSKIMEKAAKDIKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRILVPESIKQEFLTALKEEFSNVKVGDPLDKNTQVGPIISKKQFDTVQSYIDKGIEEGAELLYGGPGKPEGLDTGYFARPTIFVNVKNDMTIAQEEIFGPVVSVITYNDLDEAIEIANDTKYGLAGYVIGKDKETLQKVARSIEAGRIQINESPNEPYLPFGGYKQSGIGREWGDYGIEEFLEVKSIAGYFK . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 45920 47347 . - . GCA_005502385.1_00246_mRNA GCA_005502385.1_00246 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MRNYTQQYINGEWIDSESNETIDVINPATEEVIGKVAKGNEKDVEKAVQAAHDVYLEFRHSSVEERKQLLDRIVEEYKNRKQDIIEAITAELGAPLTVSENVHYQMGLQHFSEARRALDSFEFEERRGDDLVTKEAIGVSGLVTPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAIILAEIFEKAGVPKGVFNLVNGDGEGVGNPLSEHPKVRMMSFTGSGATGSKIMEKAAKDIKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRILVPESIKQEFLTALKEEFSNVKVGDPLDKNTQVGPIISKKQFDTVQSYIDKGIEEGAELLYGGPGKPEGLDTGYFARPTIFVNVKNDMTIAQEEIFGPVVSVITYNDLDEAIEIANDTKYGLAGYVIGKDKETLQKVARSIEAGRIQINESPNEPYLPFGGYKQSGIGREWGDYGIEEFLEVKSIAGYFK . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 45920 47347 . - 0 GCA_005502385.1_00246 GCA_005502385.1_00246_gene,GCA_005502385.1_00246_mRNA GCA_005502385.1_00246 Putative aldehyde dehydrogenase GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MRNYTQQYINGEWIDSESNETIDVINPATEEVIGKVAKGNEKDVEKAVQAAHDVYLEFRHSSVEERKQLLDRIVEEYKNRKQDIIEAITAELGAPLTVSENVHYQMGLQHFSEARRALDSFEFEERRGDDLVTKEAIGVSGLVTPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAIILAEIFEKAGVPKGVFNLVNGDGEGVGNPLSEHPKVRMMSFTGSGATGSKIMEKAAKDIKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRILVPESIKQEFLTALKEEFSNVKVGDPLDKNTQVGPIISKKQFDTVQSYIDKGIEEGAELLYGGPGKPEGLDTGYFARPTIFVNVKNDMTIAQEEIFGPVVSVITYNDLDEAIEIANDTKYGLAGYVIGKDKETLQKVARSIEAGRIQINESPNEPYLPFGGYKQSGIGREWGDYGIEEFLEVKSIAGYFK persistent 475 Aldehyde dehydrogenase WP_017175119.1 UPI0002E22CCF UniRef100_A0A1J6E375,UniRef50_Q4L803,UniRef90_A0A533IWD8 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 47457 47792 . - . GCA_005502385.1_00247_gene GCA_005502385.1_00247 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MEICPYLEETFKIVGRSWNGLIINYLSRCADYTAHFSDMKRDLKTITPRALSIKLTELGEWELVDKKVISTRPVSIVYELTDKGKALAEALRPIEAWARDYVTLEHNDSVK . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 47457 47792 . - . GCA_005502385.1_00247_mRNA GCA_005502385.1_00247 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MEICPYLEETFKIVGRSWNGLIINYLSRCADYTAHFSDMKRDLKTITPRALSIKLTELGEWELVDKKVISTRPVSIVYELTDKGKALAEALRPIEAWARDYVTLEHNDSVK . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 47457 47792 . - 0 GCA_005502385.1_00247 GCA_005502385.1_00247_gene,GCA_005502385.1_00247_mRNA GCA_005502385.1_00247 HTH-type transcriptional regulator YodB GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MEICPYLEETFKIVGRSWNGLIINYLSRCADYTAHFSDMKRDLKTITPRALSIKLTELGEWELVDKKVISTRPVSIVYELTDKGKALAEALRPIEAWARDYVTLEHNDSVK persistent 111 Transcriptional regulator WP_002488141.1 UPI00024E1AD0 UniRef100_A0A1L8Y5T6,UniRef50_B9DMD6,UniRef90_A0A1L8Y5T6 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 47880 49151 . - . GCA_005502385.1_00248_gene GCA_005502385.1_00248 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSQEVIKIRGGQPLKGEVTISGAKNSAVAIIPATLLAQGQVKIDGLPQISDVETLVSLLEDLNIKTNLNGKTLEVDTTDIKNAPLPNNKVESLRASYYMMGAMLGRFKKCVIGLPGGCPLGPRPIDQHIKGFKALGAEIDESSDTSMKIEAKELHGANIFLDMVSVGATINIMLAAVHAKGQTTIENAAKEPEVVDVANFLNSLGANIKGAGTSTLKISGVEELHGAEYQVIPDRIEAGTYMCIAAACGDEVTIKNIVPKHLEALTVKLNELGVDIDIDDDKEQIVIKGKSSYKNVDIKTLVYPGFATDLQQPITPLLFMTDGPSFVTETIYPARFRHVEELKNMGASIEADTSTGTATIKPSKLQGAKVYASDLRAGACLIIAGLLAEGVTTIYNVKHIYRGYTDIVKHLKDLGADIWTEQV . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 47880 49151 . - . GCA_005502385.1_00248_mRNA GCA_005502385.1_00248 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSQEVIKIRGGQPLKGEVTISGAKNSAVAIIPATLLAQGQVKIDGLPQISDVETLVSLLEDLNIKTNLNGKTLEVDTTDIKNAPLPNNKVESLRASYYMMGAMLGRFKKCVIGLPGGCPLGPRPIDQHIKGFKALGAEIDESSDTSMKIEAKELHGANIFLDMVSVGATINIMLAAVHAKGQTTIENAAKEPEVVDVANFLNSLGANIKGAGTSTLKISGVEELHGAEYQVIPDRIEAGTYMCIAAACGDEVTIKNIVPKHLEALTVKLNELGVDIDIDDDKEQIVIKGKSSYKNVDIKTLVYPGFATDLQQPITPLLFMTDGPSFVTETIYPARFRHVEELKNMGASIEADTSTGTATIKPSKLQGAKVYASDLRAGACLIIAGLLAEGVTTIYNVKHIYRGYTDIVKHLKDLGADIWTEQV . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 47880 49151 . - 0 GCA_005502385.1_00248 GCA_005502385.1_00248_gene,GCA_005502385.1_00248_mRNA GCA_005502385.1_00248 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSQEVIKIRGGQPLKGEVTISGAKNSAVAIIPATLLAQGQVKIDGLPQISDVETLVSLLEDLNIKTNLNGKTLEVDTTDIKNAPLPNNKVESLRASYYMMGAMLGRFKKCVIGLPGGCPLGPRPIDQHIKGFKALGAEIDESSDTSMKIEAKELHGANIFLDMVSVGATINIMLAAVHAKGQTTIENAAKEPEVVDVANFLNSLGANIKGAGTSTLKISGVEELHGAEYQVIPDRIEAGTYMCIAAACGDEVTIKNIVPKHLEALTVKLNELGVDIDIDDDKEQIVIKGKSSYKNVDIKTLVYPGFATDLQQPITPLLFMTDGPSFVTETIYPARFRHVEELKNMGASIEADTSTGTATIKPSKLQGAKVYASDLRAGACLIIAGLLAEGVTTIYNVKHIYRGYTDIVKHLKDLGADIWTEQV persistent 423 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2.5.1.7 GO:0008760,GO:0019277 WP_019835606.1 UPI0003771169 UniRef100_UPI0003771169,UniRef50_P19670,UniRef90_A0A3S7GX96 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 49544 50401 . - . GCA_005502385.1_00249_gene GCA_005502385.1_00249 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MPLVSMKEMLIDAKENGYAVGQYNLNNLEFTQAILEASQEENAPVILGVSEGAARYMSGFYTVVKMVEGLMHDLNITIPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHSPFEENIEITSKVVEYAHQHGVSVEAELGTVGGQEDDVVGGIIYADPKECQELVERTGIDTLAPALGSVHGPYKGEPKLGFKEMEEIGASTGLPLVLHGGTGIPTKDIQKAIPYGTAKINVNTENQIASAKAVRDVLNNDKEVYDPRKYLGPAREAIKETVKGKIREFGTSNRAK . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 49544 50401 . - . GCA_005502385.1_00249_mRNA GCA_005502385.1_00249 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MPLVSMKEMLIDAKENGYAVGQYNLNNLEFTQAILEASQEENAPVILGVSEGAARYMSGFYTVVKMVEGLMHDLNITIPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHSPFEENIEITSKVVEYAHQHGVSVEAELGTVGGQEDDVVGGIIYADPKECQELVERTGIDTLAPALGSVHGPYKGEPKLGFKEMEEIGASTGLPLVLHGGTGIPTKDIQKAIPYGTAKINVNTENQIASAKAVRDVLNNDKEVYDPRKYLGPAREAIKETVKGKIREFGTSNRAK . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 49544 50401 . - 0 GCA_005502385.1_00249 GCA_005502385.1_00249_gene,GCA_005502385.1_00249_mRNA GCA_005502385.1_00249 Fructose-bisphosphate aldolase GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MPLVSMKEMLIDAKENGYAVGQYNLNNLEFTQAILEASQEENAPVILGVSEGAARYMSGFYTVVKMVEGLMHDLNITIPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHSPFEENIEITSKVVEYAHQHGVSVEAELGTVGGQEDDVVGGIIYADPKECQELVERTGIDTLAPALGSVHGPYKGEPKLGFKEMEEIGASTGLPLVLHGGTGIPTKDIQKAIPYGTAKINVNTENQIASAKAVRDVLNNDKEVYDPRKYLGPAREAIKETVKGKIREFGTSNRAK persistent 285 fba class II fructose-bisphosphate aldolase 4.1.2.13 GO:0004332,GO:0006096,GO:0008270,GO:0030388 COG0191,G WP_002448638.1 UPI00019FC522 UniRef100_A0A533IZ96,UniRef50_P94453,UniRef90_Q5HM97 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 50563 51084 . + . GCA_005502385.1_00250_gene GCA_005502385.1_00250 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSKILQTQLTGIFNRLEDQALDIQMAAQCLIQAIGGEGYVYINGYGDLKFFETFILESDEKLNSSKKLSELNSLNDLDTTDRVFLFSPFYTKEVAQDVQQLIDKDIDFVLVCNRPKQEDFPEHLMHFVNLSTPRPIVYTEDYDKIVQPHTMAFNYIYYDIYTQMIEMTRDLEL . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 50563 51084 . + . GCA_005502385.1_00250_mRNA GCA_005502385.1_00250 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSKILQTQLTGIFNRLEDQALDIQMAAQCLIQAIGGEGYVYINGYGDLKFFETFILESDEKLNSSKKLSELNSLNDLDTTDRVFLFSPFYTKEVAQDVQQLIDKDIDFVLVCNRPKQEDFPEHLMHFVNLSTPRPIVYTEDYDKIVQPHTMAFNYIYYDIYTQMIEMTRDLEL . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 50563 51084 . + 0 GCA_005502385.1_00250 GCA_005502385.1_00250_gene,GCA_005502385.1_00250_mRNA GCA_005502385.1_00250 hypothetical protein GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSKILQTQLTGIFNRLEDQALDIQMAAQCLIQAIGGEGYVYINGYGDLKFFETFILESDEKLNSSKKLSELNSLNDLDTTDRVFLFSPFYTKEVAQDVQQLIDKDIDFVLVCNRPKQEDFPEHLMHFVNLSTPRPIVYTEDYDKIVQPHTMAFNYIYYDIYTQMIEMTRDLEL persistent 173 DUF2529 domain-containing protein WP_019835604.1 UPI0003743C62 UniRef100_UPI0003743C62,UniRef50_Q2FWD2,UniRef90_A0A6N0I1K7 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 51201 52808 . - . GCA_005502385.1_00251_gene GCA_005502385.1_00251 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MTKFIFVTGGVVSSLGKGITAASLGRLLKDRGLKVTIQKFDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDINLNKYSNVTAGKVYSHVLKKERRGDYLGGTVQVIPHITNEIKERLLLAGESTNADVVITEIGGTTGDIESLPFIEAIRQIRSDLGRENVMYVHCTLLPYIKAAGEMKTKPTQHSVKELRGLGIQPDLIVVRTEYEMTQDLKDKIALFCDIDKESVIECRDASSLYEIPLQLSAQNMDDIVIKRLDLDAKYDTQLDEWQYLLDTVNSLDGTITIGLVGKYVSLQDAYLSVVESLKHAGYPLKKDVVVKWIDSSEVTDENVESYLSDVDGILVPGGFGFRASEGKISAIKYARENNIPYFGICLGMQLATVEFARNVVGLKDAHSAELDPNTPYPIIDLLPEQKDIEDLGGTLRLGLYPCTIKDHTLAHDIYNETNIEERHRHRYEFNNSYREQLEDKGMVFSGTSPDGRLVEMVEIPENDFFIACQFHPEFLSRPNRPQPIFKAFVEAAYKHQQN . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 51201 52808 . - . GCA_005502385.1_00251_mRNA GCA_005502385.1_00251 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MTKFIFVTGGVVSSLGKGITAASLGRLLKDRGLKVTIQKFDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDINLNKYSNVTAGKVYSHVLKKERRGDYLGGTVQVIPHITNEIKERLLLAGESTNADVVITEIGGTTGDIESLPFIEAIRQIRSDLGRENVMYVHCTLLPYIKAAGEMKTKPTQHSVKELRGLGIQPDLIVVRTEYEMTQDLKDKIALFCDIDKESVIECRDASSLYEIPLQLSAQNMDDIVIKRLDLDAKYDTQLDEWQYLLDTVNSLDGTITIGLVGKYVSLQDAYLSVVESLKHAGYPLKKDVVVKWIDSSEVTDENVESYLSDVDGILVPGGFGFRASEGKISAIKYARENNIPYFGICLGMQLATVEFARNVVGLKDAHSAELDPNTPYPIIDLLPEQKDIEDLGGTLRLGLYPCTIKDHTLAHDIYNETNIEERHRHRYEFNNSYREQLEDKGMVFSGTSPDGRLVEMVEIPENDFFIACQFHPEFLSRPNRPQPIFKAFVEAAYKHQQN . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 51201 52808 . - 0 GCA_005502385.1_00251 GCA_005502385.1_00251_gene,GCA_005502385.1_00251_mRNA GCA_005502385.1_00251 CTP synthase GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MTKFIFVTGGVVSSLGKGITAASLGRLLKDRGLKVTIQKFDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDINLNKYSNVTAGKVYSHVLKKERRGDYLGGTVQVIPHITNEIKERLLLAGESTNADVVITEIGGTTGDIESLPFIEAIRQIRSDLGRENVMYVHCTLLPYIKAAGEMKTKPTQHSVKELRGLGIQPDLIVVRTEYEMTQDLKDKIALFCDIDKESVIECRDASSLYEIPLQLSAQNMDDIVIKRLDLDAKYDTQLDEWQYLLDTVNSLDGTITIGLVGKYVSLQDAYLSVVESLKHAGYPLKKDVVVKWIDSSEVTDENVESYLSDVDGILVPGGFGFRASEGKISAIKYARENNIPYFGICLGMQLATVEFARNVVGLKDAHSAELDPNTPYPIIDLLPEQKDIEDLGGTLRLGLYPCTIKDHTLAHDIYNETNIEERHRHRYEFNNSYREQLEDKGMVFSGTSPDGRLVEMVEIPENDFFIACQFHPEFLSRPNRPQPIFKAFVEAAYKHQQN persistent 535 pyrG CTP synthase 6.3.4.2 GO:0003883,GO:0004359,GO:0005524,GO:0005829,GO:0006221,GO:0006241,GO:0019856,GO:0042802,GO:0044210,GO:0046872 COG0504,F WP_101804386.1 UPI000C7E4535 UniRef100_UPI000C7E4535,UniRef50_Q4L808,UniRef90_Q4L808 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 52885 52953 . - . GCA_005502385.1_00252_gene GCA_005502385.1_00252 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 52885 52953 . - . GCA_005502385.1_00252_mRNA GCA_005502385.1_00252 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 . . . . . . . GCA_005502385.1|SCOV01000012.1 Infernal:001001 misc_RNA 52885 52953 93.8 - . GCA_005502385.1_00252 GCA_005502385.1_00252_gene,GCA_005502385.1_00252_mRNA GCA_005502385.1_00252 tsr31 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 53006 53536 . - . GCA_005502385.1_00253_gene GCA_005502385.1_00253 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKIQDYTKEMVDEKSFIDMAYTLLHDKGSTMNLYDIIDEFKSLGNYEYDEIENRIVQFYTDLNTDGRFLNVGENQWGLRDWYSVDDIEEKIAPTIQKFDILDDDDEEDENLKLLGDDEMDDDDDIPAQTDDQETLDDSDDNEEDIDGSDIVIEEDDDDDIAEGEEEAFEDAEDFND . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 53006 53536 . - . GCA_005502385.1_00253_mRNA GCA_005502385.1_00253 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKIQDYTKEMVDEKSFIDMAYTLLHDKGSTMNLYDIIDEFKSLGNYEYDEIENRIVQFYTDLNTDGRFLNVGENQWGLRDWYSVDDIEEKIAPTIQKFDILDDDDEEDENLKLLGDDEMDDDDDIPAQTDDQETLDDSDDNEEDIDGSDIVIEEDDDDDIAEGEEEAFEDAEDFND . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 53006 53536 . - 0 GCA_005502385.1_00253 GCA_005502385.1_00253_gene,GCA_005502385.1_00253_mRNA GCA_005502385.1_00253 putative DNA-directed RNA polymerase subunit delta GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKIQDYTKEMVDEKSFIDMAYTLLHDKGSTMNLYDIIDEFKSLGNYEYDEIENRIVQFYTDLNTDGRFLNVGENQWGLRDWYSVDDIEEKIAPTIQKFDILDDDDEEDENLKLLGDDEMDDDDDIPAQTDDQETLDDSDDNEEDIDGSDIVIEEDDDDDIAEGEEEAFEDAEDFND persistent 176 rpoE DNA-directed RNA polymerase subunit delta 2.7.7.6 GO:0003899,GO:0006351,GO:0006355 WP_002448639.1 UPI00019FC51F UniRef100_A0A657M0W5,UniRef50_Q2FWD0,UniRef90_A0A657M0W5 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 53646 54506 . - . GCA_005502385.1_00254_gene GCA_005502385.1_00254 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSIVKQFENITIQEFEEQYRDDVLNFELSERQQIYSSLPKSVLEDALKDENRVANIAINENGDVVGFFVLHQYYQHEGYDTPEHVVYVRSLSINEKFQGQGYGTTMMMYLPQYVQLLFPDFNHLYLVVDTENEGAWNVYERAGFMHTATKEEGPIGKERLYYLDLDSKHVSSLKLVENKNSNIAMYQIIDLLKDDQKVGFIALEHLNTHLNIAAIEVYKDQRKEGIAGSGLRQLPTYVRKHFKEIRSIGITLFGENNELKPLCISSGFVETDQSDDLVIFKKYINY . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 53646 54506 . - . GCA_005502385.1_00254_mRNA GCA_005502385.1_00254 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSIVKQFENITIQEFEEQYRDDVLNFELSERQQIYSSLPKSVLEDALKDENRVANIAINENGDVVGFFVLHQYYQHEGYDTPEHVVYVRSLSINEKFQGQGYGTTMMMYLPQYVQLLFPDFNHLYLVVDTENEGAWNVYERAGFMHTATKEEGPIGKERLYYLDLDSKHVSSLKLVENKNSNIAMYQIIDLLKDDQKVGFIALEHLNTHLNIAAIEVYKDQRKEGIAGSGLRQLPTYVRKHFKEIRSIGITLFGENNELKPLCISSGFVETDQSDDLVIFKKYINY . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 53646 54506 . - 0 GCA_005502385.1_00254 GCA_005502385.1_00254_gene,GCA_005502385.1_00254_mRNA GCA_005502385.1_00254 hypothetical protein """""" GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSIVKQFENITIQEFEEQYRDDVLNFELSERQQIYSSLPKSVLEDALKDENRVANIAINENGDVVGFFVLHQYYQHEGYDTPEHVVYVRSLSINEKFQGQGYGTTMMMYLPQYVQLLFPDFNHLYLVVDTENEGAWNVYERAGFMHTATKEEGPIGKERLYYLDLDSKHVSSLKLVENKNSNIAMYQIIDLLKDDQKVGFIALEHLNTHLNIAAIEVYKDQRKEGIAGSGLRQLPTYVRKHFKEIRSIGITLFGENNELKPLCISSGFVETDQSDDLVIFKKYINY persistent 286 Acetyltransferase UniRef50_Q2FWC9,UniRef90_A0A3S7GWM5 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 54687 55487 . + . GCA_005502385.1_00255_gene GCA_005502385.1_00255 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MRVGIDAGGTLIKIAMEDDTHRTLSTELTTDINKVIQWLNQNEFEKINLTGGNAGVIAENIKQSSQMFVEFDAASKGLGILLKEQGHHINQYIFANIGTGTSLHYYNGHHQERVGGIGTGGGMIRGLGYLLTEISDYETLTNLAQSGNRDIIDLKVKHIYKDSEPPIPGELTAANFGNVLNNMNERFTNSDKLASVVGVVGEVITTMAITVAREYQTKNVVYIGSSFNNNPLLRKVIEDYTILRGCHPFYIENGAFSGAIGVLHLS . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 54687 55487 . + . GCA_005502385.1_00255_mRNA GCA_005502385.1_00255 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MRVGIDAGGTLIKIAMEDDTHRTLSTELTTDINKVIQWLNQNEFEKINLTGGNAGVIAENIKQSSQMFVEFDAASKGLGILLKEQGHHINQYIFANIGTGTSLHYYNGHHQERVGGIGTGGGMIRGLGYLLTEISDYETLTNLAQSGNRDIIDLKVKHIYKDSEPPIPGELTAANFGNVLNNMNERFTNSDKLASVVGVVGEVITTMAITVAREYQTKNVVYIGSSFNNNPLLRKVIEDYTILRGCHPFYIENGAFSGAIGVLHLS . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 54687 55487 . + 0 GCA_005502385.1_00255 GCA_005502385.1_00255_gene,GCA_005502385.1_00255_mRNA GCA_005502385.1_00255 Type II pantothenate kinase GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MRVGIDAGGTLIKIAMEDDTHRTLSTELTTDINKVIQWLNQNEFEKINLTGGNAGVIAENIKQSSQMFVEFDAASKGLGILLKEQGHHINQYIFANIGTGTSLHYYNGHHQERVGGIGTGGGMIRGLGYLLTEISDYETLTNLAQSGNRDIIDLKVKHIYKDSEPPIPGELTAANFGNVLNNMNERFTNSDKLASVVGVVGEVITTMAITVAREYQTKNVVYIGSSFNNNPLLRKVIEDYTILRGCHPFYIENGAFSGAIGVLHLS persistent 266 coaW type II pantothenate kinase 2.7.1.33 GO:0004594,GO:0005524,GO:0015937 UniRef50_Q2FWC7,UniRef90_A0A3S7GWH2 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 55557 56222 . - . GCA_005502385.1_00256_gene GCA_005502385.1_00256 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MEYKHNDYFKEILINEVIILASKNKKLIRIHHEDGDYTGMWTNEDIAKEYLNHSDIQFDRLLNIDIDTFVTYDMDELFDESDKILINTSSKEEGYIVKVVDMMDELMSELDKIRLKEFAKDISKENHVFGLTRKGEKRFILISDKENQKPNIMPVWSIKNRARKVRDKDFEECDLIKIEASVFSEWLDKLRDNDQAVAVDLKPGVVGTIVSPQKVSNELSF . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 55557 56222 . - . GCA_005502385.1_00256_mRNA GCA_005502385.1_00256 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MEYKHNDYFKEILINEVIILASKNKKLIRIHHEDGDYTGMWTNEDIAKEYLNHSDIQFDRLLNIDIDTFVTYDMDELFDESDKILINTSSKEEGYIVKVVDMMDELMSELDKIRLKEFAKDISKENHVFGLTRKGEKRFILISDKENQKPNIMPVWSIKNRARKVRDKDFEECDLIKIEASVFSEWLDKLRDNDQAVAVDLKPGVVGTIVSPQKVSNELSF . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 55557 56222 . - 0 GCA_005502385.1_00256 GCA_005502385.1_00256_gene,GCA_005502385.1_00256_mRNA GCA_005502385.1_00256 hypothetical protein GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MEYKHNDYFKEILINEVIILASKNKKLIRIHHEDGDYTGMWTNEDIAKEYLNHSDIQFDRLLNIDIDTFVTYDMDELFDESDKILINTSSKEEGYIVKVVDMMDELMSELDKIRLKEFAKDISKENHVFGLTRKGEKRFILISDKENQKPNIMPVWSIKNRARKVRDKDFEECDLIKIEASVFSEWLDKLRDNDQAVAVDLKPGVVGTIVSPQKVSNELSF persistent 221 DUF2750 domain-containing protein WP_137689739.1 UPI0010F86EA0 UniRef100_UPI0010F86EA0,UniRef50_Q2FWC6,UniRef90_A0AAE5F6W0 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 56327 57523 . - . GCA_005502385.1_00257_gene GCA_005502385.1_00257 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKNEYNVPKLTLSDLYDENIVYNSRPSYALNPWLTTEEHQSNFLTGREMIIAKDMPIVVHEASITDKLQQLFDLIGKKIPKHLYTFRDRETYERLLQEIINKEGKKIYFQYIENNDIVDDEAYAIDKDVFVALNNKSRIPEWTNHKYLPDREIVSIRDFKGRIKDWDYPFVIKPGDELPTAGGYGVMICYNDEDLEKATQRIFEAAHATDNLIIEQKIEAVKNYCVQFAYSKEIGITYLGTAHQITDKYGLYAGNENVHDVPEKVIQAGREIMQNGVNLGFIGVAGFDLLLDENDNVFAIDLNFRQNGSTSMLLLQDELNPNYQKFYSYFSRGDNTRFFNVILKYVKQGVLYPLSYYDGDWFGKDEVNSRFGCIWNADSKEEVEQLEQAFISELDDTN . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 56327 57523 . - . GCA_005502385.1_00257_mRNA GCA_005502385.1_00257 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKNEYNVPKLTLSDLYDENIVYNSRPSYALNPWLTTEEHQSNFLTGREMIIAKDMPIVVHEASITDKLQQLFDLIGKKIPKHLYTFRDRETYERLLQEIINKEGKKIYFQYIENNDIVDDEAYAIDKDVFVALNNKSRIPEWTNHKYLPDREIVSIRDFKGRIKDWDYPFVIKPGDELPTAGGYGVMICYNDEDLEKATQRIFEAAHATDNLIIEQKIEAVKNYCVQFAYSKEIGITYLGTAHQITDKYGLYAGNENVHDVPEKVIQAGREIMQNGVNLGFIGVAGFDLLLDENDNVFAIDLNFRQNGSTSMLLLQDELNPNYQKFYSYFSRGDNTRFFNVILKYVKQGVLYPLSYYDGDWFGKDEVNSRFGCIWNADSKEEVEQLEQAFISELDDTN . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 56327 57523 . - 0 GCA_005502385.1_00257 GCA_005502385.1_00257_gene,GCA_005502385.1_00257_mRNA GCA_005502385.1_00257 hypothetical protein GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MKNEYNVPKLTLSDLYDENIVYNSRPSYALNPWLTTEEHQSNFLTGREMIIAKDMPIVVHEASITDKLQQLFDLIGKKIPKHLYTFRDRETYERLLQEIINKEGKKIYFQYIENNDIVDDEAYAIDKDVFVALNNKSRIPEWTNHKYLPDREIVSIRDFKGRIKDWDYPFVIKPGDELPTAGGYGVMICYNDEDLEKATQRIFEAAHATDNLIIEQKIEAVKNYCVQFAYSKEIGITYLGTAHQITDKYGLYAGNENVHDVPEKVIQAGREIMQNGVNLGFIGVAGFDLLLDENDNVFAIDLNFRQNGSTSMLLLQDELNPNYQKFYSYFSRGDNTRFFNVILKYVKQGVLYPLSYYDGDWFGKDEVNSRFGCIWNADSKEEVEQLEQAFISELDDTN persistent 398 ATP-grasp domain-containing protein 6.3.2.- WP_070468325.1 UPI0008A3CDD7 UniRef100_UPI0008A3CDD7,UniRef50_Q2FWC5,UniRef90_A0A3S7GZI5 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 57528 58703 . - . GCA_005502385.1_00258_gene GCA_005502385.1_00258 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSSKQEILDYIENKKYDYVEISHRIHERPELGNEEIFASRTLIDQLRANDFEIETDIAGHATGFIATYQSEKEGPTIGYLAEYDALPGLGHACGHNIIGTASVLAGVALKQVIDHIGGKVVVLGCPAEEGGENGSAKASYVKAGVIDDIDIALMIHPGNETYPTINTLAVDVLDIKFYGKSAHASENADEALNALDAMISYFNGVAQLRQQIKKSHRVHGVILDGGKAANIIPDYTHARFYTRATTRKELDILTERVNQIARGAAIQTGCDYEFGPIQNGVNEFIKTPKLDELFEKYAIEVGEEVSYDDFGFGSTDTGNVSHIVPTIHPHVKIGSRNLVGHTHRFREAAASVHGDQALIRGAKIIALMGLELIENKKLFDEVVEQHSQIKG . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 57528 58703 . - . GCA_005502385.1_00258_mRNA GCA_005502385.1_00258 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSSKQEILDYIENKKYDYVEISHRIHERPELGNEEIFASRTLIDQLRANDFEIETDIAGHATGFIATYQSEKEGPTIGYLAEYDALPGLGHACGHNIIGTASVLAGVALKQVIDHIGGKVVVLGCPAEEGGENGSAKASYVKAGVIDDIDIALMIHPGNETYPTINTLAVDVLDIKFYGKSAHASENADEALNALDAMISYFNGVAQLRQQIKKSHRVHGVILDGGKAANIIPDYTHARFYTRATTRKELDILTERVNQIARGAAIQTGCDYEFGPIQNGVNEFIKTPKLDELFEKYAIEVGEEVSYDDFGFGSTDTGNVSHIVPTIHPHVKIGSRNLVGHTHRFREAAASVHGDQALIRGAKIIALMGLELIENKKLFDEVVEQHSQIKG . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 57528 58703 . - 0 GCA_005502385.1_00258 GCA_005502385.1_00258_gene,GCA_005502385.1_00258_mRNA GCA_005502385.1_00258 p-aminobenzoyl-glutamate hydrolase subunit B GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MSSKQEILDYIENKKYDYVEISHRIHERPELGNEEIFASRTLIDQLRANDFEIETDIAGHATGFIATYQSEKEGPTIGYLAEYDALPGLGHACGHNIIGTASVLAGVALKQVIDHIGGKVVVLGCPAEEGGENGSAKASYVKAGVIDDIDIALMIHPGNETYPTINTLAVDVLDIKFYGKSAHASENADEALNALDAMISYFNGVAQLRQQIKKSHRVHGVILDGGKAANIIPDYTHARFYTRATTRKELDILTERVNQIARGAAIQTGCDYEFGPIQNGVNEFIKTPKLDELFEKYAIEVGEEVSYDDFGFGSTDTGNVSHIVPTIHPHVKIGSRNLVGHTHRFREAAASVHGDQALIRGAKIIALMGLELIENKKLFDEVVEQHSQIKG persistent 391 abgB Peptidase M20 domain-containing protein 2 COG1473,R UniRef50_Q79EU8,UniRef90_A0A2A1K8Z5 . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka gene 58963 59433 . + . GCA_005502385.1_00259_gene GCA_005502385.1_00259 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MTKMNVESFNLDHTKVVAPYIRLAGTMEGINGDVIKKYDLRFKQPNKAHMDMPALHSLEHLMAENIRNHSDKVVDLSPMGCQTGFYVSFIDHDDYEDVLNIIEKTLNDVLEATEVPACNEVQCGWAASHSLEGAKALAKEFLDKRNQWDDVFGEGK . . . . . . . GCA_005502385.1|SCOV01000012.1 prokka mRNA 58963 59433 . + . GCA_005502385.1_00259_mRNA GCA_005502385.1_00259 GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MTKMNVESFNLDHTKVVAPYIRLAGTMEGINGDVIKKYDLRFKQPNKAHMDMPALHSLEHLMAENIRNHSDKVVDLSPMGCQTGFYVSFIDHDDYEDVLNIIEKTLNDVLEATEVPACNEVQCGWAASHSLEGAKALAKEFLDKRNQWDDVFGEGK . . . . . . . GCA_005502385.1|SCOV01000012.1 Prodigal:002006 CDS 58963 59433 . + 0 GCA_005502385.1_00259 GCA_005502385.1_00259_gene,GCA_005502385.1_00259_mRNA GCA_005502385.1_00259 S-ribosylhomocysteine lyase GCA_005502385.1 SCOV01000012.1 GCA_005502385.1|SCOV01000012.1 GCA_005502385.1_SCOV01000012.1 MTKMNVESFNLDHTKVVAPYIRLAGTMEGINGDVIKKYDLRFKQPNKAHMDMPALHSLEHLMAENIRNHSDKVVDLSPMGCQTGFYVSFIDHDDYEDVLNIIEKTLNDVLEATEVPACNEVQCGWAASHSLEGAKALAKEFLDKRNQWDDVFGEGK persistent 156 S-ribosylhomocysteine lyase 4.4.1.21 GO:0005506,GO:0009372,GO:0043768 WP_048680310.1 UPI000660F0D0 UniRef100_UPI000660F0D0,UniRef50_Q9ZMW8,UniRef90_A0A3S7GX86 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 762 1328 . - . GCA_005502385.1_00260_gene GCA_005502385.1_00260 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MKGLIVVGSAQVGSHTNALAKYLTGQFDNHDVDVDIFDLAERPLNQLDFSGTTHSTEEIKANTKEFQDKAMEADFLIFGTPNYHGSYSGILKNALDYINMDYVKMKPVGLIGNSGGIVSSEPLSHLRVIVRSLLGIAVPTQIATHDSDYAKLEDGTLYLNDEEFQLRAKLFVDQIVSFVNNSPYEHLK . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 762 1328 . - . GCA_005502385.1_00260_mRNA GCA_005502385.1_00260 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MKGLIVVGSAQVGSHTNALAKYLTGQFDNHDVDVDIFDLAERPLNQLDFSGTTHSTEEIKANTKEFQDKAMEADFLIFGTPNYHGSYSGILKNALDYINMDYVKMKPVGLIGNSGGIVSSEPLSHLRVIVRSLLGIAVPTQIATHDSDYAKLEDGTLYLNDEEFQLRAKLFVDQIVSFVNNSPYEHLK . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 762 1328 . - 0 GCA_005502385.1_00260 GCA_005502385.1_00260_gene,GCA_005502385.1_00260_mRNA GCA_005502385.1_00260 FMN-dependent NADPH-azoreductase GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MKGLIVVGSAQVGSHTNALAKYLTGQFDNHDVDVDIFDLAERPLNQLDFSGTTHSTEEIKANTKEFQDKAMEADFLIFGTPNYHGSYSGILKNALDYINMDYVKMKPVGLIGNSGGIVSSEPLSHLRVIVRSLLGIAVPTQIATHDSDYAKLEDGTLYLNDEEFQLRAKLFVDQIVSFVNNSPYEHLK persistent 188 FMN-dependent NADPH-azoreductase WP_019835796.1 UPI000378997B UniRef100_UPI000378997B,UniRef50_Q2G0L7,UniRef90_A0A2A1K9H3 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 1356 2222 . - . GCA_005502385.1_00261_gene GCA_005502385.1_00261 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MIKLIATDMDGTLLNAAHEISEENINAIKYAQSKGITVVIATGRAFYEASTPMAETDLKVPYICLNGAEVRDESFNIMNTSHLNHELVERIKAILDREDVYYQVYTNRGIYTEDPTRDLDIYLDIARNAGQQGDVEKIKAGIQKRIDNGTLKIVDNYKDIEDIPGELIMKVLAFNPDLEKIERIGKELSAISSLAVSSSSRGNLEITHSDAQKGIALETIANQLHIDLQDVMALGDNLNDVSMLERVGYPVAMDNAMPEVKAIAKLVTDTNEHSGVGKAIIKVLTEEK . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 1356 2222 . - . GCA_005502385.1_00261_mRNA GCA_005502385.1_00261 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MIKLIATDMDGTLLNAAHEISEENINAIKYAQSKGITVVIATGRAFYEASTPMAETDLKVPYICLNGAEVRDESFNIMNTSHLNHELVERIKAILDREDVYYQVYTNRGIYTEDPTRDLDIYLDIARNAGQQGDVEKIKAGIQKRIDNGTLKIVDNYKDIEDIPGELIMKVLAFNPDLEKIERIGKELSAISSLAVSSSSRGNLEITHSDAQKGIALETIANQLHIDLQDVMALGDNLNDVSMLERVGYPVAMDNAMPEVKAIAKLVTDTNEHSGVGKAIIKVLTEEK . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 1356 2222 . - 0 GCA_005502385.1_00261 GCA_005502385.1_00261_gene,GCA_005502385.1_00261_mRNA GCA_005502385.1_00261 Phosphatase YwpJ GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MIKLIATDMDGTLLNAAHEISEENINAIKYAQSKGITVVIATGRAFYEASTPMAETDLKVPYICLNGAEVRDESFNIMNTSHLNHELVERIKAILDREDVYYQVYTNRGIYTEDPTRDLDIYLDIARNAGQQGDVEKIKAGIQKRIDNGTLKIVDNYKDIEDIPGELIMKVLAFNPDLEKIERIGKELSAISSLAVSSSSRGNLEITHSDAQKGIALETIANQLHIDLQDVMALGDNLNDVSMLERVGYPVAMDNAMPEVKAIAKLVTDTNEHSGVGKAIIKVLTEEK persistent 288 HAD family hydrolase 3.1.3.104 WP_017175353.1 UPI00031F6359 UniRef100_A0A4Q9WT93,UniRef50_Q2G0L8,UniRef90_A0A2A1KA51 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 2340 2828 . - . GCA_005502385.1_00262_gene GCA_005502385.1_00262 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MTNDEFYMKCAIEEAKKAEQLGEVPIGAVIVKDNEIISRAHNLRETLQQPTAHAEHLAIERAAKVIGSWRLEDCTLYVTLEPCVMCAGTVVMSRIPRVVYGAMDPKGGCSGSLMDLLQQPQFNHRAIVEQGVLEEACSNLLRQFFRDLRAKKVKRNTSPYKR . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 2340 2828 . - . GCA_005502385.1_00262_mRNA GCA_005502385.1_00262 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MTNDEFYMKCAIEEAKKAEQLGEVPIGAVIVKDNEIISRAHNLRETLQQPTAHAEHLAIERAAKVIGSWRLEDCTLYVTLEPCVMCAGTVVMSRIPRVVYGAMDPKGGCSGSLMDLLQQPQFNHRAIVEQGVLEEACSNLLRQFFRDLRAKKVKRNTSPYKR . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 2340 2828 . - 0 GCA_005502385.1_00262 GCA_005502385.1_00262_gene,GCA_005502385.1_00262_mRNA GCA_005502385.1_00262 tRNA-specific adenosine deaminase GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MTNDEFYMKCAIEEAKKAEQLGEVPIGAVIVKDNEIISRAHNLRETLQQPTAHAEHLAIERAAKVIGSWRLEDCTLYVTLEPCVMCAGTVVMSRIPRVVYGAMDPKGGCSGSLMDLLQQPQFNHRAIVEQGVLEEACSNLLRQFFRDLRAKKVKRNTSPYKR persistent 162 tadA tRNA adenosine(34) deaminase TadA 3.5.4.33 GO:0002100,GO:0008251,GO:0008270 UniRef50_A0A0D0QYW1,UniRef90_A0A4Q9WR25 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 2892 3509 . + . GCA_005502385.1_00263_gene GCA_005502385.1_00263 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MNKPFIAIEGPIGVGKSSLTHKISQTFNYYEENEIINENPFLSDFYDDISKWSFQTEMFFLCNRYKQAQDIAKINQGVVSDYHIYKNRIFARNTLNESEFDKFNRIFNILTEDLELPNMIIFLDADLDVLKRRIAKRNRSFEHQIEDSYLLNLKKDYLSFYETLKNDGANVILIDTSDLDFVQNESDYQLILNQIKPMIGDITYE . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 2892 3509 . + . GCA_005502385.1_00263_mRNA GCA_005502385.1_00263 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MNKPFIAIEGPIGVGKSSLTHKISQTFNYYEENEIINENPFLSDFYDDISKWSFQTEMFFLCNRYKQAQDIAKINQGVVSDYHIYKNRIFARNTLNESEFDKFNRIFNILTEDLELPNMIIFLDADLDVLKRRIAKRNRSFEHQIEDSYLLNLKKDYLSFYETLKNDGANVILIDTSDLDFVQNESDYQLILNQIKPMIGDITYE . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 2892 3509 . + 0 GCA_005502385.1_00263 GCA_005502385.1_00263_gene,GCA_005502385.1_00263_mRNA GCA_005502385.1_00263 Deoxyguanosine kinase GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MNKPFIAIEGPIGVGKSSLTHKISQTFNYYEENEIINENPFLSDFYDDISKWSFQTEMFFLCNRYKQAQDIAKINQGVVSDYHIYKNRIFARNTLNESEFDKFNRIFNILTEDLELPNMIIFLDADLDVLKRRIAKRNRSFEHQIEDSYLLNLKKDYLSFYETLKNDGANVILIDTSDLDFVQNESDYQLILNQIKPMIGDITYE persistent 205 AAA family ATPase 2.7.1.113 WP_049379513.1 UPI00066BB14A UniRef100_UPI00066BB14A,UniRef50_A0A380GAH5,UniRef90_A0A3S7GU53 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 3502 4164 . + . GCA_005502385.1_00264_gene GCA_005502385.1_00264 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MNNYGIPQNAIITIAGTVGVGKSTLTQALADKLNFRTSFENVDHNPYLDKFYNDFERWSFHLQIYFLAERFKEQKRMFEYGGGFIQDRSIYEDVDIFAKMHEEQGTMSKEDFKTYSELFEAMVMTPYFPKPDVLIYLDCDYDEVIDRIHQRGRDMEMNTDPVYWKKLFKRYENWINNFNACPVVRVNINEYDIHENPDSLDPIIDKIAHIIQTYRNVDHR . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 3502 4164 . + . GCA_005502385.1_00264_mRNA GCA_005502385.1_00264 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MNNYGIPQNAIITIAGTVGVGKSTLTQALADKLNFRTSFENVDHNPYLDKFYNDFERWSFHLQIYFLAERFKEQKRMFEYGGGFIQDRSIYEDVDIFAKMHEEQGTMSKEDFKTYSELFEAMVMTPYFPKPDVLIYLDCDYDEVIDRIHQRGRDMEMNTDPVYWKKLFKRYENWINNFNACPVVRVNINEYDIHENPDSLDPIIDKIAHIIQTYRNVDHR . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 3502 4164 . + 0 GCA_005502385.1_00264 GCA_005502385.1_00264_gene,GCA_005502385.1_00264_mRNA GCA_005502385.1_00264 Deoxyadenosine/deoxycytidine kinase GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MNNYGIPQNAIITIAGTVGVGKSTLTQALADKLNFRTSFENVDHNPYLDKFYNDFERWSFHLQIYFLAERFKEQKRMFEYGGGFIQDRSIYEDVDIFAKMHEEQGTMSKEDFKTYSELFEAMVMTPYFPKPDVLIYLDCDYDEVIDRIHQRGRDMEMNTDPVYWKKLFKRYENWINNFNACPVVRVNINEYDIHENPDSLDPIIDKIAHIIQTYRNVDHR persistent 220 dck Deoxypurine kinase COG1428,F WP_002449060.1 UPI00019FCD72 UniRef100_A0A657ZQ63,UniRef50_P37529,UniRef90_A0A4U9TH76 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 4310 5011 . - . GCA_005502385.1_00265_gene GCA_005502385.1_00265 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MEWILFDKDGTLIEFDHSWEKIGVRLVNSFLDTFPVANKEATLRKLGVVKDTIRPDSVMGSGSLDEIVHAFNDESGKDVSKWTRDTSQTLIDSREPENNWIDGVYDMIQSLRHEGYKIGIVTSDSEKGVTQFLEETHSKDAFDLVISTEAHAAEKPNPEVLKPLFDHYDVKPEDVAIVGDTNNDMKTKVNAKLGLAIGVLSGIAKKEELVDADYVIETAVSVPEVLKKYTQNN . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 4310 5011 . - . GCA_005502385.1_00265_mRNA GCA_005502385.1_00265 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MEWILFDKDGTLIEFDHSWEKIGVRLVNSFLDTFPVANKEATLRKLGVVKDTIRPDSVMGSGSLDEIVHAFNDESGKDVSKWTRDTSQTLIDSREPENNWIDGVYDMIQSLRHEGYKIGIVTSDSEKGVTQFLEETHSKDAFDLVISTEAHAAEKPNPEVLKPLFDHYDVKPEDVAIVGDTNNDMKTKVNAKLGLAIGVLSGIAKKEELVDADYVIETAVSVPEVLKKYTQNN . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 4310 5011 . - 0 GCA_005502385.1_00265 GCA_005502385.1_00265_gene,GCA_005502385.1_00265_mRNA GCA_005502385.1_00265 Phosphoglycolate phosphatase GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MEWILFDKDGTLIEFDHSWEKIGVRLVNSFLDTFPVANKEATLRKLGVVKDTIRPDSVMGSGSLDEIVHAFNDESGKDVSKWTRDTSQTLIDSREPENNWIDGVYDMIQSLRHEGYKIGIVTSDSEKGVTQFLEETHSKDAFDLVISTEAHAAEKPNPEVLKPLFDHYDVKPEDVAIVGDTNNDMKTKVNAKLGLAIGVLSGIAKKEELVDADYVIETAVSVPEVLKKYTQNN persistent 233 HAD family hydrolase WP_049415740.1 UPI00066B2BEC UniRef100_UPI00066B2BEC,UniRef50_A0A0D0RQV1,UniRef90_A0A4Q9WRW9 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 5990 6184 . + . GCA_005502385.1_00266_gene GCA_005502385.1_00266 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MLIVIFILFGIGIGLFIFSFFLAQNEGLAYKTISRGFSALFVSLGILALMGYLINFISSHYLNI . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 5990 6184 . + . GCA_005502385.1_00266_mRNA GCA_005502385.1_00266 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MLIVIFILFGIGIGLFIFSFFLAQNEGLAYKTISRGFSALFVSLGILALMGYLINFISSHYLNI . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 5990 6184 . + 0 GCA_005502385.1_00266 GCA_005502385.1_00266_gene,GCA_005502385.1_00266_mRNA GCA_005502385.1_00266 hypothetical protein GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MLIVIFILFGIGIGLFIFSFFLAQNEGLAYKTISRGFSALFVSLGILALMGYLINFISSHYLNI persistent 64 DUF1146 domain-containing protein WP_002449037.1 UPI00019FCD75 UniRef100_A0A974KWX2,UniRef50_Q4L389,UniRef90_A0A4Q9WR15 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 7179 7385 . - . GCA_005502385.1_00267_gene GCA_005502385.1_00267 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MNIYVAILLGILFVLIYSVINTLLYNMNYRRMNHNENMNIKMILINLILHGVIALIMVSIAIYLSYFK . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 7179 7385 . - . GCA_005502385.1_00267_mRNA GCA_005502385.1_00267 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MNIYVAILLGILFVLIYSVINTLLYNMNYRRMNHNENMNIKMILINLILHGVIALIMVSIAIYLSYFK . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 7179 7385 . - 0 GCA_005502385.1_00267 GCA_005502385.1_00267_gene,GCA_005502385.1_00267_mRNA GCA_005502385.1_00267 hypothetical protein GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MNIYVAILLGILFVLIYSVINTLLYNMNYRRMNHNENMNIKMILINLILHGVIALIMVSIAIYLSYFK cloud 68 Mid2-like cell wall stress sensor domain protein UniRef50_A0A2T4KGP1 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 7679 9109 . - . GCA_005502385.1_00268_gene GCA_005502385.1_00268 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MCSDKNEKIYKIRDNFKQEVSNKRPLKDKLDGVYVFVSFDLVDSTRYKNIENDWSMLIQKFYQGTYEMVKTEVNSDFKVWKYVGDEILLFLKVNKINDLIEIPSKLYKVMNDIQLSLEEIFPNSKGLIYLKGTVFVAKINEVSDKNEKNKNYILQTCNNDQLANQLIIRDFLGPDIDLGFRLTKHSHKNQLVVSLELVYLITKYISQSYSYDTETDRNFRVMKLIALKGIWHNRKYPVIWFKPNIEDWKPLNLLEYDDDLLKDEDLDFYLNNYSDKNEHLNLSDFMSRVLRQSGKIKTVDEIIHYFADKDSKAIETPDALELNLTVPADRITEVHYVLIGINIQNKTVAVFKKTKGNETIYDFGCVHSDGYTRVIELVKNYYNDLYKEMDILMRTKDDDILLPVSMYEYENRKRDKRISGFMFVASIEDITGNLPEGYEAVLMKPIDECKGENFYSDSQINLNLAFERLREKINVD . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 7679 9109 . - . GCA_005502385.1_00268_mRNA GCA_005502385.1_00268 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MCSDKNEKIYKIRDNFKQEVSNKRPLKDKLDGVYVFVSFDLVDSTRYKNIENDWSMLIQKFYQGTYEMVKTEVNSDFKVWKYVGDEILLFLKVNKINDLIEIPSKLYKVMNDIQLSLEEIFPNSKGLIYLKGTVFVAKINEVSDKNEKNKNYILQTCNNDQLANQLIIRDFLGPDIDLGFRLTKHSHKNQLVVSLELVYLITKYISQSYSYDTETDRNFRVMKLIALKGIWHNRKYPVIWFKPNIEDWKPLNLLEYDDDLLKDEDLDFYLNNYSDKNEHLNLSDFMSRVLRQSGKIKTVDEIIHYFADKDSKAIETPDALELNLTVPADRITEVHYVLIGINIQNKTVAVFKKTKGNETIYDFGCVHSDGYTRVIELVKNYYNDLYKEMDILMRTKDDDILLPVSMYEYENRKRDKRISGFMFVASIEDITGNLPEGYEAVLMKPIDECKGENFYSDSQINLNLAFERLREKINVD . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 7679 9109 . - 0 GCA_005502385.1_00268 GCA_005502385.1_00268_gene,GCA_005502385.1_00268_mRNA GCA_005502385.1_00268 hypothetical protein """""" GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MCSDKNEKIYKIRDNFKQEVSNKRPLKDKLDGVYVFVSFDLVDSTRYKNIENDWSMLIQKFYQGTYEMVKTEVNSDFKVWKYVGDEILLFLKVNKINDLIEIPSKLYKVMNDIQLSLEEIFPNSKGLIYLKGTVFVAKINEVSDKNEKNKNYILQTCNNDQLANQLIIRDFLGPDIDLGFRLTKHSHKNQLVVSLELVYLITKYISQSYSYDTETDRNFRVMKLIALKGIWHNRKYPVIWFKPNIEDWKPLNLLEYDDDLLKDEDLDFYLNNYSDKNEHLNLSDFMSRVLRQSGKIKTVDEIIHYFADKDSKAIETPDALELNLTVPADRITEVHYVLIGINIQNKTVAVFKKTKGNETIYDFGCVHSDGYTRVIELVKNYYNDLYKEMDILMRTKDDDILLPVSMYEYENRKRDKRISGFMFVASIEDITGNLPEGYEAVLMKPIDECKGENFYSDSQINLNLAFERLREKINVD cloud 476 hypothetical protein WP_137689744.1 UPI0010F72CE6 UniRef100_UPI0010F72CE6,UniRef50_UPI0028799038,UniRef90_UPI0010F72CE6 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 9096 9605 . - . GCA_005502385.1_00269_gene GCA_005502385.1_00269 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MTVQKLIKETIDRIYSAFEIPRHQPINLDEFLNTLNIQLHESEELIYEGKIEKDYNDNTIITIKYNHNEGRRRFTIAHELGHYFLHFNDEDKEFKDSVFYRNLEYNNEEIEANEFAANLLMPEEEYKAFAEKNAYNQESNTYDVKKIAEYFRVSRQAAIYRGKNLNVFR . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 9096 9605 . - . GCA_005502385.1_00269_mRNA GCA_005502385.1_00269 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MTVQKLIKETIDRIYSAFEIPRHQPINLDEFLNTLNIQLHESEELIYEGKIEKDYNDNTIITIKYNHNEGRRRFTIAHELGHYFLHFNDEDKEFKDSVFYRNLEYNNEEIEANEFAANLLMPEEEYKAFAEKNAYNQESNTYDVKKIAEYFRVSRQAAIYRGKNLNVFR . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 9096 9605 . - 0 GCA_005502385.1_00269 GCA_005502385.1_00269_gene,GCA_005502385.1_00269_mRNA GCA_005502385.1_00269 hypothetical protein """""" GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MTVQKLIKETIDRIYSAFEIPRHQPINLDEFLNTLNIQLHESEELIYEGKIEKDYNDNTIITIKYNHNEGRRRFTIAHELGHYFLHFNDEDKEFKDSVFYRNLEYNNEEIEANEFAANLLMPEEEYKAFAEKNAYNQESNTYDVKKIAEYFRVSRQAAIYRGKNLNVFR cloud 169 ImmA/IrrE family metallo-endopeptidase WP_170999992.1 UPI001484CA0E UniRef100_UPI001484CA0E,UniRef50_UPI00287A3F96,UniRef90_UPI00287A3F96 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 9617 10096 . - . GCA_005502385.1_00270_gene GCA_005502385.1_00270 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSNENSKVENKEKIDEIKKLLDDTSNWLKFIEAKIVFLVGLMITVGLKAFSLNKISFINPNTYLLLLYCTVVVVLVLNISSIINIFRKSNGNYLYYKDISAFSIEDFQKKLFSVESWEEVYVKQIHTLSKIATKKHRILVICTLLFILLMILKGILETI . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 9617 10096 . - . GCA_005502385.1_00270_mRNA GCA_005502385.1_00270 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSNENSKVENKEKIDEIKKLLDDTSNWLKFIEAKIVFLVGLMITVGLKAFSLNKISFINPNTYLLLLYCTVVVVLVLNISSIINIFRKSNGNYLYYKDISAFSIEDFQKKLFSVESWEEVYVKQIHTLSKIATKKHRILVICTLLFILLMILKGILETI . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 9617 10096 . - 0 GCA_005502385.1_00270 GCA_005502385.1_00270_gene,GCA_005502385.1_00270_mRNA GCA_005502385.1_00270 hypothetical protein GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSNENSKVENKEKIDEIKKLLDDTSNWLKFIEAKIVFLVGLMITVGLKAFSLNKISFINPNTYLLLLYCTVVVVLVLNISSIINIFRKSNGNYLYYKDISAFSIEDFQKKLFSVESWEEVYVKQIHTLSKIATKKHRILVICTLLFILLMILKGILETI cloud 159 Pycsar system effector family protein WP_137689746.1 UPI0010F6AA90 UniRef100_UPI0010F6AA90,UniRef50_UPI00287A9EB3,UniRef90_UPI0010F6AA90 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 10262 11089 . - . GCA_005502385.1_00271_gene GCA_005502385.1_00271 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MNNAKDKFLAIVFIVLLIAFSVIILAGFALQLEVLGNYIEGLFALIAALIAVVGVSETIKSNQNLKNRELLKNQELKNQELLNSLDQKSEWRKELMIIAAKPIIELEDIFRILASLRFLPKSKVEIEGEESKQQEEQSKNQENREDDSNQKEFDVISNFIYKKLNTILNDMLLDLNINEIYTQKFSNIPLSIKDSEEIRLYTKFLLKHHWEYNKGEKDKKKFKKKELNEFKKVMDEIHRLNQEDNIKKGYYKTDKIYTGILDDYAKKLAKNNKGK . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 10262 11089 . - . GCA_005502385.1_00271_mRNA GCA_005502385.1_00271 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MNNAKDKFLAIVFIVLLIAFSVIILAGFALQLEVLGNYIEGLFALIAALIAVVGVSETIKSNQNLKNRELLKNQELKNQELLNSLDQKSEWRKELMIIAAKPIIELEDIFRILASLRFLPKSKVEIEGEESKQQEEQSKNQENREDDSNQKEFDVISNFIYKKLNTILNDMLLDLNINEIYTQKFSNIPLSIKDSEEIRLYTKFLLKHHWEYNKGEKDKKKFKKKELNEFKKVMDEIHRLNQEDNIKKGYYKTDKIYTGILDDYAKKLAKNNKGK . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 10262 11089 . - 0 GCA_005502385.1_00271 GCA_005502385.1_00271_gene,GCA_005502385.1_00271_mRNA GCA_005502385.1_00271 hypothetical protein GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MNNAKDKFLAIVFIVLLIAFSVIILAGFALQLEVLGNYIEGLFALIAALIAVVGVSETIKSNQNLKNRELLKNQELKNQELLNSLDQKSEWRKELMIIAAKPIIELEDIFRILASLRFLPKSKVEIEGEESKQQEEQSKNQENREDDSNQKEFDVISNFIYKKLNTILNDMLLDLNINEIYTQKFSNIPLSIKDSEEIRLYTKFLLKHHWEYNKGEKDKKKFKKKELNEFKKVMDEIHRLNQEDNIKKGYYKTDKIYTGILDDYAKKLAKNNKGK cloud 275 hypothetical protein WP_137689747.1 UPI0010F93F50 UniRef100_UPI0010F93F50,UniRef50_UPI0010F93F50,UniRef90_UPI0010F93F50 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 11267 11521 . - . GCA_005502385.1_00272_gene GCA_005502385.1_00272 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSKKVIKGIKEGLTIFIIAIAIAIVLNILDLNIGYNRFWKYLGNLGIINIFDNKSLNGLIILGFIIGCIVFLINLFSSDKEDED . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 11267 11521 . - . GCA_005502385.1_00272_mRNA GCA_005502385.1_00272 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSKKVIKGIKEGLTIFIIAIAIAIVLNILDLNIGYNRFWKYLGNLGIINIFDNKSLNGLIILGFIIGCIVFLINLFSSDKEDED . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 11267 11521 . - 0 GCA_005502385.1_00272 GCA_005502385.1_00272_gene,GCA_005502385.1_00272_mRNA GCA_005502385.1_00272 hypothetical protein GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSKKVIKGIKEGLTIFIIAIAIAIVLNILDLNIGYNRFWKYLGNLGIINIFDNKSLNGLIILGFIIGCIVFLINLFSSDKEDED shell 84 hypothetical protein WP_137689748.1 UPI0010F8EE3A UniRef100_UPI0010F8EE3A,UniRef50_A0A4Y7VNK2,UniRef90_UPI001F584305 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 11545 11706 . - . GCA_005502385.1_00273_gene GCA_005502385.1_00273 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MNNKNIKIKTFATFNTKTLDEKVNEFTNREDIEVIEIKTSSNWLYISATVIYK . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 11545 11706 . - . GCA_005502385.1_00273_mRNA GCA_005502385.1_00273 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MNNKNIKIKTFATFNTKTLDEKVNEFTNREDIEVIEIKTSSNWLYISATVIYK . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 11545 11706 . - 0 GCA_005502385.1_00273 GCA_005502385.1_00273_gene,GCA_005502385.1_00273_mRNA GCA_005502385.1_00273 hypothetical protein GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MNNKNIKIKTFATFNTKTLDEKVNEFTNREDIEVIEIKTSSNWLYISATVIYK shell 53 Sporulation protein Cse60 WP_170999991.1 UPI000DFB810A UniRef100_UPI000DFB810A,UniRef50_D2J692,UniRef90_UPI000A9EF586 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 12111 12374 . - . GCA_005502385.1_00274_gene GCA_005502385.1_00274 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MVKALMLIITIVCVAYIVYNFIKDKPVINIFFALIIQSILLFLIRFFWIKQSFSKSLLSSFDLFTIIVVVIYLIYKLSKRRKEKEDK . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 12111 12374 . - . GCA_005502385.1_00274_mRNA GCA_005502385.1_00274 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MVKALMLIITIVCVAYIVYNFIKDKPVINIFFALIIQSILLFLIRFFWIKQSFSKSLLSSFDLFTIIVVVIYLIYKLSKRRKEKEDK . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 12111 12374 . - 0 GCA_005502385.1_00274 GCA_005502385.1_00274_gene,GCA_005502385.1_00274_mRNA GCA_005502385.1_00274 hypothetical protein GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MVKALMLIITIVCVAYIVYNFIKDKPVINIFFALIIQSILLFLIRFFWIKQSFSKSLLSSFDLFTIIVVVIYLIYKLSKRRKEKEDK shell 87 hypothetical protein WP_137689749.1 UPI0010F70C21 UniRef100_UPI0010F70C21,UniRef50_A0A3S7GYM9,UniRef90_A0A4Z1BPN8 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 12551 12727 . + . GCA_005502385.1_00275_gene GCA_005502385.1_00275 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MKYRLIAVVIFAIIVLIATFYIQPMLNTDNQLINLVYVVFLFVVGAILGYIGRRLDSK . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 12551 12727 . + . GCA_005502385.1_00275_mRNA GCA_005502385.1_00275 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MKYRLIAVVIFAIIVLIATFYIQPMLNTDNQLINLVYVVFLFVVGAILGYIGRRLDSK . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 12551 12727 . + 0 GCA_005502385.1_00275 GCA_005502385.1_00275_gene,GCA_005502385.1_00275_mRNA GCA_005502385.1_00275 hypothetical protein GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MKYRLIAVVIFAIIVLIATFYIQPMLNTDNQLINLVYVVFLFVVGAILGYIGRRLDSK shell 58 hypothetical protein WP_160300589.1 UPI000671D30B UniRef100_UPI000671D30B,UniRef50_A0A2T4L3C8,UniRef90_UPI0014333283 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 13308 13490 . - . GCA_005502385.1_00276_gene GCA_005502385.1_00276 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSGLKILLVICISVFVGNVVLMLLENAPMNIWIIRLIGGVACAISGILLTNYFQKKKSQS . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 13308 13490 . - . GCA_005502385.1_00276_mRNA GCA_005502385.1_00276 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSGLKILLVICISVFVGNVVLMLLENAPMNIWIIRLIGGVACAISGILLTNYFQKKKSQS . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 13308 13490 . - 0 GCA_005502385.1_00276 GCA_005502385.1_00276_gene,GCA_005502385.1_00276_mRNA GCA_005502385.1_00276 hypothetical protein GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSGLKILLVICISVFVGNVVLMLLENAPMNIWIIRLIGGVACAISGILLTNYFQKKKSQS cloud 60 hypothetical protein WP_033079969.1 UPI00051A78DD UniRef100_UPI00051A78DD,UniRef50_K9AV11,UniRef90_UPI00266C7994 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 13686 13871 . - . GCA_005502385.1_00277_gene GCA_005502385.1_00277 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MPEKSKLGNSLAFNYFLLLVGVLTFLGYYFLGDVNVMMSGLMAMFPITVGITNIGRIKNEK . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 13686 13871 . - . GCA_005502385.1_00277_mRNA GCA_005502385.1_00277 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MPEKSKLGNSLAFNYFLLLVGVLTFLGYYFLGDVNVMMSGLMAMFPITVGITNIGRIKNEK . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 13686 13871 . - 0 GCA_005502385.1_00277 GCA_005502385.1_00277_gene,GCA_005502385.1_00277_mRNA GCA_005502385.1_00277 hypothetical protein GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MPEKSKLGNSLAFNYFLLLVGVLTFLGYYFLGDVNVMMSGLMAMFPITVGITNIGRIKNEK cloud 61 fosB Uncharacterized protein in fosB 5'region WP_119626157.1 UPI000E6A887B UniRef100_UPI00301A9652,UniRef50_Q03382,UniRef90_UPI00301A9652 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 14651 15178 . + . GCA_005502385.1_00278_gene GCA_005502385.1_00278 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MRRGELMALTWEDINFKNKTISIDKTVTIGLNGKEIIQPPKTHSSIRVISIDDRTLSILKNWRVEQRKLCLMHGHNTSDKSQCLFTNLRTNKRLQVQHPNKAMDKICKKYNFKKIKIHGFRLTHCSLLFEADLSIQEVQDRLGHGDISTTMDVYGHITEKQREKVAENFTNYISF . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 14651 15178 . + . GCA_005502385.1_00278_mRNA GCA_005502385.1_00278 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MRRGELMALTWEDINFKNKTISIDKTVTIGLNGKEIIQPPKTHSSIRVISIDDRTLSILKNWRVEQRKLCLMHGHNTSDKSQCLFTNLRTNKRLQVQHPNKAMDKICKKYNFKKIKIHGFRLTHCSLLFEADLSIQEVQDRLGHGDISTTMDVYGHITEKQREKVAENFTNYISF . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 14651 15178 . + 0 GCA_005502385.1_00278 GCA_005502385.1_00278_gene,GCA_005502385.1_00278_mRNA GCA_005502385.1_00278 Tyrosine recombinase XerC GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MRRGELMALTWEDINFKNKTISIDKTVTIGLNGKEIIQPPKTHSSIRVISIDDRTLSILKNWRVEQRKLCLMHGHNTSDKSQCLFTNLRTNKRLQVQHPNKAMDKICKKYNFKKIKIHGFRLTHCSLLFEADLSIQEVQDRLGHGDISTTMDVYGHITEKQREKVAENFTNYISF shell 175 site-specific integrase UniRef50_A0A2X2JY98,UniRef90_UPI002016697B . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 15264 16343 . - . GCA_005502385.1_00279_gene GCA_005502385.1_00279 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSEKVKFEQRDTLKEKPEGNLGFGQYFTDYMLSVDYDEEKGGWQELKIIPYAPFEISPAAQSLHYGQAVFEGLKAYKHNGEVVLFRPDQNFKRINDSLARLEMPKVDEELLLDGLKQLVDIERDWVPEGEGQSLYIRPFVFATEGILGVRASKKYKLLIILSPSGAYYGGDTLKSTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANNLGYDQVLWLDGVEQKYVEEVGSMNIFFVENGKLVTPALNGSILPGITRKSIIELAKELGYEVEERKVSIDELFEAYDKGELTEVFGSGTAAVISPVGTLKYEDREIVINNNEPGEITKKIYDTYIGIQSGKLEDKHGWRVIVPEYK . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 15264 16343 . - . GCA_005502385.1_00279_mRNA GCA_005502385.1_00279 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSEKVKFEQRDTLKEKPEGNLGFGQYFTDYMLSVDYDEEKGGWQELKIIPYAPFEISPAAQSLHYGQAVFEGLKAYKHNGEVVLFRPDQNFKRINDSLARLEMPKVDEELLLDGLKQLVDIERDWVPEGEGQSLYIRPFVFATEGILGVRASKKYKLLIILSPSGAYYGGDTLKSTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANNLGYDQVLWLDGVEQKYVEEVGSMNIFFVENGKLVTPALNGSILPGITRKSIIELAKELGYEVEERKVSIDELFEAYDKGELTEVFGSGTAAVISPVGTLKYEDREIVINNNEPGEITKKIYDTYIGIQSGKLEDKHGWRVIVPEYK . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 15264 16343 . - 0 GCA_005502385.1_00279 GCA_005502385.1_00279_gene,GCA_005502385.1_00279_mRNA GCA_005502385.1_00279 putative branched-chain-amino-acid aminotransferase GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSEKVKFEQRDTLKEKPEGNLGFGQYFTDYMLSVDYDEEKGGWQELKIIPYAPFEISPAAQSLHYGQAVFEGLKAYKHNGEVVLFRPDQNFKRINDSLARLEMPKVDEELLLDGLKQLVDIERDWVPEGEGQSLYIRPFVFATEGILGVRASKKYKLLIILSPSGAYYGGDTLKSTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANNLGYDQVLWLDGVEQKYVEEVGSMNIFFVENGKLVTPALNGSILPGITRKSIIELAKELGYEVEERKVSIDELFEAYDKGELTEVFGSGTAAVISPVGTLKYEDREIVINNNEPGEITKKIYDTYIGIQSGKLEDKHGWRVIVPEYK persistent 359 ilvE branched-chain amino acid aminotransferase 2.6.1.42 GO:0004084,GO:0009081 COG0115,EH WP_070549370.1 UPI0008A58D7A UniRef100_UPI0008A58D7A,UniRef50_Q8CQ78,UniRef90_Q4L3L9 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 16518 17465 . - . GCA_005502385.1_00280_gene GCA_005502385.1_00280 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MKRIVITGALGQIGTELVLKCRQLYGKNNVLATDIREPEPHSLISDSPFELLDVTDRDAMMGVVEDFRADTLMHMAALLSATAEKNPLQAWDLNMGGLINALETARMYDLHFFMPSSIGAFGASTPKKNTPQNTIQQPTTMYGINKVAGELLCQYYFKKFGVDTRSVRFPGLISHAKKPGGGTTDYAVEIYFEAVRHGHYTSYIAKNTYMDMMYMDDAIDAIIQLMEADSKKLVTRNGYNLSAMSLEPEMIKKEIQKYIPEFTLDYDVDPVRQTIADTWPDNIDTSYSRKEWGFNPKYHLAKMTETMIRTIKEKT . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 16518 17465 . - . GCA_005502385.1_00280_mRNA GCA_005502385.1_00280 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MKRIVITGALGQIGTELVLKCRQLYGKNNVLATDIREPEPHSLISDSPFELLDVTDRDAMMGVVEDFRADTLMHMAALLSATAEKNPLQAWDLNMGGLINALETARMYDLHFFMPSSIGAFGASTPKKNTPQNTIQQPTTMYGINKVAGELLCQYYFKKFGVDTRSVRFPGLISHAKKPGGGTTDYAVEIYFEAVRHGHYTSYIAKNTYMDMMYMDDAIDAIIQLMEADSKKLVTRNGYNLSAMSLEPEMIKKEIQKYIPEFTLDYDVDPVRQTIADTWPDNIDTSYSRKEWGFNPKYHLAKMTETMIRTIKEKT . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 16518 17465 . - 0 GCA_005502385.1_00280 GCA_005502385.1_00280_gene,GCA_005502385.1_00280_mRNA GCA_005502385.1_00280 putative epimerase/dehydratase GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MKRIVITGALGQIGTELVLKCRQLYGKNNVLATDIREPEPHSLISDSPFELLDVTDRDAMMGVVEDFRADTLMHMAALLSATAEKNPLQAWDLNMGGLINALETARMYDLHFFMPSSIGAFGASTPKKNTPQNTIQQPTTMYGINKVAGELLCQYYFKKFGVDTRSVRFPGLISHAKKPGGGTTDYAVEIYFEAVRHGHYTSYIAKNTYMDMMYMDDAIDAIIQLMEADSKKLVTRNGYNLSAMSLEPEMIKKEIQKYIPEFTLDYDVDPVRQTIADTWPDNIDTSYSRKEWGFNPKYHLAKMTETMIRTIKEKT persistent 315 NAD-dependent epimerase/dehydratase family protein WP_070519064.1 UPI0008A2D61F UniRef100_UPI001F55E592,UniRef50_S6A928,UniRef90_A0A3S7GYP4 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 17774 18727 . - . GCA_005502385.1_00281_gene GCA_005502385.1_00281 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MLVLNEQDQQNLLDMKEVIEEVGHALQAFSEGKTETPLRYVLPFNKENRYLVMPALSDELNIVGIKTVTFAPNNPRLDKKTITGSVLLSDYDTGETLAVLDGSYLTKIRTGAISGVATKYLAREDAKTLCVIGAGDQAEGLIAAILAVRDIEMLHISSRTRAKAEKLAEFVKQTYHVSTKVFDEADQAMENADIVATATNSNKPVFSHSLHPGVHLNAVGSFKPEMQELPSETMLIANKIVVESTEAAMEETGDLKVPLEEGIITEQSLHGELGDIVSGKISGRDDEEEVTVFKSVGLAIIDIVVAQYFYKKAQQTN . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 17774 18727 . - . GCA_005502385.1_00281_mRNA GCA_005502385.1_00281 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MLVLNEQDQQNLLDMKEVIEEVGHALQAFSEGKTETPLRYVLPFNKENRYLVMPALSDELNIVGIKTVTFAPNNPRLDKKTITGSVLLSDYDTGETLAVLDGSYLTKIRTGAISGVATKYLAREDAKTLCVIGAGDQAEGLIAAILAVRDIEMLHISSRTRAKAEKLAEFVKQTYHVSTKVFDEADQAMENADIVATATNSNKPVFSHSLHPGVHLNAVGSFKPEMQELPSETMLIANKIVVESTEAAMEETGDLKVPLEEGIITEQSLHGELGDIVSGKISGRDDEEEVTVFKSVGLAIIDIVVAQYFYKKAQQTN . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 17774 18727 . - 0 GCA_005502385.1_00281 GCA_005502385.1_00281_gene,GCA_005502385.1_00281_mRNA GCA_005502385.1_00281 Delta(1)-pyrroline-2-carboxylate reductase GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MLVLNEQDQQNLLDMKEVIEEVGHALQAFSEGKTETPLRYVLPFNKENRYLVMPALSDELNIVGIKTVTFAPNNPRLDKKTITGSVLLSDYDTGETLAVLDGSYLTKIRTGAISGVATKYLAREDAKTLCVIGAGDQAEGLIAAILAVRDIEMLHISSRTRAKAEKLAEFVKQTYHVSTKVFDEADQAMENADIVATATNSNKPVFSHSLHPGVHLNAVGSFKPEMQELPSETMLIANKIVVESTEAAMEETGDLKVPLEEGIITEQSLHGELGDIVSGKISGRDDEEEVTVFKSVGLAIIDIVVAQYFYKKAQQTN persistent 317 ornithine cyclodeaminase family protein 1.4.1.1 WP_070549372.1 UPI0008A46569 UniRef100_UPI0008A46569,UniRef50_A0A653YM52,UniRef90_A0A3S7GTY6 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 19039 19476 . - . GCA_005502385.1_00282_gene GCA_005502385.1_00282 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MMEGETVKDLKVVYALIQNQERKVLLVNNTDGGGWSLPGGKVEKGETLVEALKREVMEETGLNAKIGDIVSINEGKSTQMNVHTLFIMFKATIPNEVIDIQMKDEISETKWMTIEEADQKLTYYNHSLKVFLDNKATYYNEGVID . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 19039 19476 . - . GCA_005502385.1_00282_mRNA GCA_005502385.1_00282 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MMEGETVKDLKVVYALIQNQERKVLLVNNTDGGGWSLPGGKVEKGETLVEALKREVMEETGLNAKIGDIVSINEGKSTQMNVHTLFIMFKATIPNEVIDIQMKDEISETKWMTIEEADQKLTYYNHSLKVFLDNKATYYNEGVID . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 19039 19476 . - 0 GCA_005502385.1_00282 GCA_005502385.1_00282_gene,GCA_005502385.1_00282_mRNA GCA_005502385.1_00282 RNA pyrophosphohydrolase GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MMEGETVKDLKVVYALIQNQERKVLLVNNTDGGGWSLPGGKVEKGETLVEALKREVMEETGLNAKIGDIVSINEGKSTQMNVHTLFIMFKATIPNEVIDIQMKDEISETKWMTIEEADQKLTYYNHSLKVFLDNKATYYNEGVID persistent 145 mutT DNA mismatch repair protein MutT UniRef50_G5JLP4,UniRef90_A0A3S7GU80 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 19463 19975 . - . GCA_005502385.1_00283_gene GCA_005502385.1_00283 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MLELRKLEYKDKESLIRYLQYWYDNNEKIVPSNVDVAHYQSFQQMVEQLNHPPVNMNTVPSTTLFYFKNDDIVGAVNIRHELNDKLTNIGGHVGYGVAKPYRGNGYASSMLEEALNRLNKMGIHKVLMTCNPYNYASQKVIKKHGGYEINSYIKKNGQPVSRFEILNDGR . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 19463 19975 . - . GCA_005502385.1_00283_mRNA GCA_005502385.1_00283 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MLELRKLEYKDKESLIRYLQYWYDNNEKIVPSNVDVAHYQSFQQMVEQLNHPPVNMNTVPSTTLFYFKNDDIVGAVNIRHELNDKLTNIGGHVGYGVAKPYRGNGYASSMLEEALNRLNKMGIHKVLMTCNPYNYASQKVIKKHGGYEINSYIKKNGQPVSRFEILNDGR . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 19463 19975 . - 0 GCA_005502385.1_00283 GCA_005502385.1_00283_gene,GCA_005502385.1_00283_mRNA GCA_005502385.1_00283 hypothetical protein GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MLELRKLEYKDKESLIRYLQYWYDNNEKIVPSNVDVAHYQSFQQMVEQLNHPPVNMNTVPSTTLFYFKNDDIVGAVNIRHELNDKLTNIGGHVGYGVAKPYRGNGYASSMLEEALNRLNKMGIHKVLMTCNPYNYASQKVIKKHGGYEINSYIKKNGQPVSRFEILNDGR persistent 170 GNAT family N-acetyltransferase UniRef50_A0A0H2VEP8,UniRef90_A0A3S7GY30 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 20445 21620 . + . GCA_005502385.1_00284_gene GCA_005502385.1_00284 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MVNVFDWFQLASEKENRMIQMRRYMHQYPEPSFEETWTHNYILNQLSHLDCEIVSPVGRNGIKATFKGKENGPTIAFRADFDALPVQELNDVPYKSKNDGFMHACGHDGHTAILLGVAEIVHEHRHLLKGNVVFIFQYGEEIMPGGSQEMIDDGCLNDVDKIYGTHLWSGYPTGTIYSRPGAIMASPDEFSITIKGKGGHGAKPHETIDPIVIMAEFILSAQKIISRTIDPVKEAVLTFGMVQAGSSDSVIPDSAFCKGTVRTFDTELQAHIQEKMDKLLQGLALANDVTYNMEYIRGYLPVHNHEEAYETVKQAANDLHLRFNKSELMMIGEDFSHYLKVRPGAFFLTGCGNADKGITAPHHNPHFDIDEAAFKYAASEFLKILELESVF . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 20445 21620 . + . GCA_005502385.1_00284_mRNA GCA_005502385.1_00284 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MVNVFDWFQLASEKENRMIQMRRYMHQYPEPSFEETWTHNYILNQLSHLDCEIVSPVGRNGIKATFKGKENGPTIAFRADFDALPVQELNDVPYKSKNDGFMHACGHDGHTAILLGVAEIVHEHRHLLKGNVVFIFQYGEEIMPGGSQEMIDDGCLNDVDKIYGTHLWSGYPTGTIYSRPGAIMASPDEFSITIKGKGGHGAKPHETIDPIVIMAEFILSAQKIISRTIDPVKEAVLTFGMVQAGSSDSVIPDSAFCKGTVRTFDTELQAHIQEKMDKLLQGLALANDVTYNMEYIRGYLPVHNHEEAYETVKQAANDLHLRFNKSELMMIGEDFSHYLKVRPGAFFLTGCGNADKGITAPHHNPHFDIDEAAFKYAASEFLKILELESVF . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 20445 21620 . + 0 GCA_005502385.1_00284 GCA_005502385.1_00284_gene,GCA_005502385.1_00284_mRNA GCA_005502385.1_00284 N-acetylcysteine deacetylase GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MVNVFDWFQLASEKENRMIQMRRYMHQYPEPSFEETWTHNYILNQLSHLDCEIVSPVGRNGIKATFKGKENGPTIAFRADFDALPVQELNDVPYKSKNDGFMHACGHDGHTAILLGVAEIVHEHRHLLKGNVVFIFQYGEEIMPGGSQEMIDDGCLNDVDKIYGTHLWSGYPTGTIYSRPGAIMASPDEFSITIKGKGGHGAKPHETIDPIVIMAEFILSAQKIISRTIDPVKEAVLTFGMVQAGSSDSVIPDSAFCKGTVRTFDTELQAHIQEKMDKLLQGLALANDVTYNMEYIRGYLPVHNHEEAYETVKQAANDLHLRFNKSELMMIGEDFSHYLKVRPGAFFLTGCGNADKGITAPHHNPHFDIDEAAFKYAASEFLKILELESVF persistent 391 N-acetyl-L,L-diaminopimelate deacetylase UniRef50_A0A2I7Y808,UniRef90_A0A380G239 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 21803 22987 . - . GCA_005502385.1_00285_gene GCA_005502385.1_00285 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAKEKFDRSKEHANIGTIGHVDHGKTTLTAAIATVLAKNGDTVAQSYDMIDNAPEEKERGITINTAHIEYQTDKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTREHILLSRNVGVPALVVFLNKVDMVDDEELLELVEMEVRDLLSEYDFPGDDVPVIAGSALKALEGDAQYEEKILELMQAVDDYIPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQIKVGEEVEIIGIKETSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITPHTKFKADVYVLSKDEGGRHTPFFTNYRPQFYFRTTDVTGVVNLPEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIFE . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 21803 22987 . - . GCA_005502385.1_00285_mRNA GCA_005502385.1_00285 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAKEKFDRSKEHANIGTIGHVDHGKTTLTAAIATVLAKNGDTVAQSYDMIDNAPEEKERGITINTAHIEYQTDKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTREHILLSRNVGVPALVVFLNKVDMVDDEELLELVEMEVRDLLSEYDFPGDDVPVIAGSALKALEGDAQYEEKILELMQAVDDYIPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQIKVGEEVEIIGIKETSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITPHTKFKADVYVLSKDEGGRHTPFFTNYRPQFYFRTTDVTGVVNLPEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIFE . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 21803 22987 . - 0 GCA_005502385.1_00285 GCA_005502385.1_00285_gene,GCA_005502385.1_00285_mRNA GCA_005502385.1_00285 Elongation factor Tu GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAKEKFDRSKEHANIGTIGHVDHGKTTLTAAIATVLAKNGDTVAQSYDMIDNAPEEKERGITINTAHIEYQTDKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTREHILLSRNVGVPALVVFLNKVDMVDDEELLELVEMEVRDLLSEYDFPGDDVPVIAGSALKALEGDAQYEEKILELMQAVDDYIPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQIKVGEEVEIIGIKETSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITPHTKFKADVYVLSKDEGGRHTPFFTNYRPQFYFRTTDVTGVVNLPEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIFE persistent 394 tuf elongation factor Tu GO:0003746,GO:0003924,GO:0005525,GO:0005829,GO:0006414 COG0050,J WP_017175321.1 UPI0002DBD45E UniRef100_A0A1J6DRP9,UniRef50_A6GYU7,UniRef90_Q4L3K9 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 23198 25279 . - . GCA_005502385.1_00286_gene GCA_005502385.1_00286 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAREFSLKNTRNIGIMAHIDAGKTTTTERILYYTGRIHKIGETHEGASQMDWMEQEQDRGITITSAATTASWKDHRVNIIDTPGHVDFTVEVERSLRVLDGAVTVLDAQSGVEPQTETVWRQATTYGVPRIVFVNKMDKLGANFEYSVSTLHDRLQANAAPIQLPIGAEDEFEAIIDLVEMKCFKYTNDLGTEIEEIEIPEDHKERAEEARSNLIEAVAETSDELMEKYLGDEEISVAELKNAIRQATTDVEFYPVLCGTAFKNKGVQLMLNAVIDYLPSPLDVKPIVGHRAENPDEEVIAKADDNAEFAALAFKVMTDPYVGKLTFFRVYSGTLTSGSYVKNSTKDKRERVGRLLQMHANSRQEIDTVYSGDIAAAVGLKETGTGDTLCGEKNDIILESMEFPEPVIHLSVEPKSKADQDKMTQALVKLQEEDPTFHAHTDEETGQVIIGGMGELHLDILVDRMKKEFNVECNVGAPMVSYRETFKQSAQVQGKFSRQSGGRGQYGDVHIEFTPNETGAGFEFENAIVGGVVPREYIPSVEAGLKDAMENGVLAGYPLIDVKAKLFDGSYHDVDSSEMAFKIAASLALKEAAKKCDPVILEPMMKVTIEMPEEYMGDIMGDVTARRGRVDGMEPRGNAQVVNAYVPLSEMFGYATSLRSNTQGRGTYTMYFDHYAEVPKSIAEEIIKKNKGE . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 23198 25279 . - . GCA_005502385.1_00286_mRNA GCA_005502385.1_00286 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAREFSLKNTRNIGIMAHIDAGKTTTTERILYYTGRIHKIGETHEGASQMDWMEQEQDRGITITSAATTASWKDHRVNIIDTPGHVDFTVEVERSLRVLDGAVTVLDAQSGVEPQTETVWRQATTYGVPRIVFVNKMDKLGANFEYSVSTLHDRLQANAAPIQLPIGAEDEFEAIIDLVEMKCFKYTNDLGTEIEEIEIPEDHKERAEEARSNLIEAVAETSDELMEKYLGDEEISVAELKNAIRQATTDVEFYPVLCGTAFKNKGVQLMLNAVIDYLPSPLDVKPIVGHRAENPDEEVIAKADDNAEFAALAFKVMTDPYVGKLTFFRVYSGTLTSGSYVKNSTKDKRERVGRLLQMHANSRQEIDTVYSGDIAAAVGLKETGTGDTLCGEKNDIILESMEFPEPVIHLSVEPKSKADQDKMTQALVKLQEEDPTFHAHTDEETGQVIIGGMGELHLDILVDRMKKEFNVECNVGAPMVSYRETFKQSAQVQGKFSRQSGGRGQYGDVHIEFTPNETGAGFEFENAIVGGVVPREYIPSVEAGLKDAMENGVLAGYPLIDVKAKLFDGSYHDVDSSEMAFKIAASLALKEAAKKCDPVILEPMMKVTIEMPEEYMGDIMGDVTARRGRVDGMEPRGNAQVVNAYVPLSEMFGYATSLRSNTQGRGTYTMYFDHYAEVPKSIAEEIIKKNKGE . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 23198 25279 . - 0 GCA_005502385.1_00286 GCA_005502385.1_00286_gene,GCA_005502385.1_00286_mRNA GCA_005502385.1_00286 Elongation factor G GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAREFSLKNTRNIGIMAHIDAGKTTTTERILYYTGRIHKIGETHEGASQMDWMEQEQDRGITITSAATTASWKDHRVNIIDTPGHVDFTVEVERSLRVLDGAVTVLDAQSGVEPQTETVWRQATTYGVPRIVFVNKMDKLGANFEYSVSTLHDRLQANAAPIQLPIGAEDEFEAIIDLVEMKCFKYTNDLGTEIEEIEIPEDHKERAEEARSNLIEAVAETSDELMEKYLGDEEISVAELKNAIRQATTDVEFYPVLCGTAFKNKGVQLMLNAVIDYLPSPLDVKPIVGHRAENPDEEVIAKADDNAEFAALAFKVMTDPYVGKLTFFRVYSGTLTSGSYVKNSTKDKRERVGRLLQMHANSRQEIDTVYSGDIAAAVGLKETGTGDTLCGEKNDIILESMEFPEPVIHLSVEPKSKADQDKMTQALVKLQEEDPTFHAHTDEETGQVIIGGMGELHLDILVDRMKKEFNVECNVGAPMVSYRETFKQSAQVQGKFSRQSGGRGQYGDVHIEFTPNETGAGFEFENAIVGGVVPREYIPSVEAGLKDAMENGVLAGYPLIDVKAKLFDGSYHDVDSSEMAFKIAASLALKEAAKKCDPVILEPMMKVTIEMPEEYMGDIMGDVTARRGRVDGMEPRGNAQVVNAYVPLSEMFGYATSLRSNTQGRGTYTMYFDHYAEVPKSIAEEIIKKNKGE persistent 693 fusA elongation factor G GO:0003746,GO:0003924,GO:0005525,GO:0005737,GO:0006414,GO:0032790 COG0480,J WP_017175320.1 UPI00030937E7 UniRef100_A0A4Q9WQY7,UniRef50_Q9SI75,UniRef90_Q2G0N1 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 25401 25871 . - . GCA_005502385.1_00287_gene GCA_005502385.1_00287 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MPRKGSVPKRDVLPDPIHNSKLVTKLINKIMLDGKRGTAQRILYSAFDLVEQRSGRDALEVFEEAINNIMPVLEVKARRVGGSNYQVPVEVRPERRTTLGLRWLVNYARLRGEKTMEDRLANEILDAANNTGGAVKKREDTHKMAEANKAFAHYRW . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 25401 25871 . - . GCA_005502385.1_00287_mRNA GCA_005502385.1_00287 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MPRKGSVPKRDVLPDPIHNSKLVTKLINKIMLDGKRGTAQRILYSAFDLVEQRSGRDALEVFEEAINNIMPVLEVKARRVGGSNYQVPVEVRPERRTTLGLRWLVNYARLRGEKTMEDRLANEILDAANNTGGAVKKREDTHKMAEANKAFAHYRW . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 25401 25871 . - 0 GCA_005502385.1_00287 GCA_005502385.1_00287_gene,GCA_005502385.1_00287_mRNA GCA_005502385.1_00287 30S ribosomal protein S7 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MPRKGSVPKRDVLPDPIHNSKLVTKLINKIMLDGKRGTAQRILYSAFDLVEQRSGRDALEVFEEAINNIMPVLEVKARRVGGSNYQVPVEVRPERRTTLGLRWLVNYARLRGEKTMEDRLANEILDAANNTGGAVKKREDTHKMAEANKAFAHYRW persistent 156 rpsG 30S ribosomal protein S7 GO:0000049,GO:0003735,GO:0006412,GO:0015935,GO:0019843 COG0049,J WP_001137495.1 UPI000004801A UniRef100_P48940,UniRef50_P02359,UniRef90_P48940 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 25941 26354 . - . GCA_005502385.1_00288_gene GCA_005502385.1_00288 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MPTINQLVRKPRQSKSKKSDSPALNRGFNSKKKQFTNLNSPQKRGVCTRVGTMTPKKPNSALRKYARVRLSNNIEINAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGALDTSGVDGRRQGRSLYGTKKPKN . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 25941 26354 . - . GCA_005502385.1_00288_mRNA GCA_005502385.1_00288 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MPTINQLVRKPRQSKSKKSDSPALNRGFNSKKKQFTNLNSPQKRGVCTRVGTMTPKKPNSALRKYARVRLSNNIEINAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGALDTSGVDGRRQGRSLYGTKKPKN . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 25941 26354 . - 0 GCA_005502385.1_00288 GCA_005502385.1_00288_gene,GCA_005502385.1_00288_mRNA GCA_005502385.1_00288 30S ribosomal protein S12 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MPTINQLVRKPRQSKSKKSDSPALNRGFNSKKKQFTNLNSPQKRGVCTRVGTMTPKKPNSALRKYARVRLSNNIEINAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGALDTSGVDGRRQGRSLYGTKKPKN persistent 137 rpsL 30S ribosomal protein S12 GO:0000049,GO:0003735,GO:0006412,GO:0015935,GO:0019843 COG0048,J WP_016931318.1 UPI00031CA07F UniRef100_A0A2A1K849,UniRef50_P0A0H0,UniRef90_P0A0H0 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 26444 26704 . - . GCA_005502385.1_00289_gene GCA_005502385.1_00289 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSNEKVARFNKQHFVVGLKQTLKALKKDQVASLIIAKDVEIYLLAQVFSQINHKSIPITYFESKSALGKAVGINVNATIVALLNEN . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 26444 26704 . - . GCA_005502385.1_00289_mRNA GCA_005502385.1_00289 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSNEKVARFNKQHFVVGLKQTLKALKKDQVASLIIAKDVEIYLLAQVFSQINHKSIPITYFESKSALGKAVGINVNATIVALLNEN . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 26444 26704 . - 0 GCA_005502385.1_00289 GCA_005502385.1_00289_gene,GCA_005502385.1_00289_mRNA GCA_005502385.1_00289 Ribosome-associated protein L7Ae-like protein GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSNEKVARFNKQHFVVGLKQTLKALKKDQVASLIIAKDVEIYLLAQVFSQINHKSIPITYFESKSALGKAVGINVNATIVALLNEN persistent 86 50S ribosomal protein L7ae-like protein WP_017175319.1 UPI0002D4FFA3 UniRef100_A0A4Q9WR13,UniRef50_P0A0G6,UniRef90_A0A6B8SLW0 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 26852 30472 . - . GCA_005502385.1_00290_gene GCA_005502385.1_00290 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MIDVNNFHYMKIGLASPEKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWECSCGKYKRVRYKGMVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDMSPRSLEEVIYFASYVVVDPGPTGLEKKSLLSEAEFREYYDKYPGQFVAKMGAEGIKDLLEEIDLDEELKALRDELESATGQRLTRAIKRLEVVESFRNSGNNPSWMILDVLPIIPPEIRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIAVGPNLKMYQCGLPKEMALELFKPFVMKELVQREIATNIKNAKSKIERMDDEVWDVLEDVIKEHPVLLNRAPTLHRLGIQAFEPTLVEGRAIRLHPLVTTAYNADFDGDQMAVHVPLSKEAQAEARMLMLAAQNILNPKDGKPVVTPSQDMVLGNYYLTLERKDAVNTGIIFNDTNEVLKAYANGYVHLHTRIGLHARSLNNPTFTEEQNNKILATSVGKVIFNEIIPDSFAYINEPTQENLEDKTPDKYFVDPTQLGEGGLKAYFEEQELTAPFNKKFLGNIIAEVFNRFSITDTSMMLDRMKDLGFKFSSKAGITVGVSDIVVLPDKQQILDEHEKLVERVSKQFNRGLITEDERYNAVVEIWTDAKDQIQGELMQSLEKTNPIFMMSDSGARGNASNFTQLAGMRGLMAAPSGKIIELPITSSFREGLTVLEYFISTHGARKGLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLLVSDIKEGTEMIEPFIERIEGRYSKETIRHPETDEIIIRPDELITPEIAKKITDAGIEKMYIRSAFTCNTRHGVCEKCYGKNLATGEKVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRIQEIFEARNPKGQAVITEIEGVVEDIKLAKDRQQEIVIKGANETRSYLASGTSRIKVEIGQSVERGEVLTEGSIEPKNFLAVAGLNATESYLLKEVQKVYRMQGVEIDDKHVEVMVRQMLRKVRIIEAGDTKLLPGSLVDIHNFTDANREAFKERKRPATAKPVLLGITKASLETESFLSAASFQETTRVLTDAAIKGKRDDLLGLKENVIIGKLIPAGTGMRRYSDVKYDKVGTPVAEADEAEVTE . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 26852 30472 . - . GCA_005502385.1_00290_mRNA GCA_005502385.1_00290 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MIDVNNFHYMKIGLASPEKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWECSCGKYKRVRYKGMVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDMSPRSLEEVIYFASYVVVDPGPTGLEKKSLLSEAEFREYYDKYPGQFVAKMGAEGIKDLLEEIDLDEELKALRDELESATGQRLTRAIKRLEVVESFRNSGNNPSWMILDVLPIIPPEIRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIAVGPNLKMYQCGLPKEMALELFKPFVMKELVQREIATNIKNAKSKIERMDDEVWDVLEDVIKEHPVLLNRAPTLHRLGIQAFEPTLVEGRAIRLHPLVTTAYNADFDGDQMAVHVPLSKEAQAEARMLMLAAQNILNPKDGKPVVTPSQDMVLGNYYLTLERKDAVNTGIIFNDTNEVLKAYANGYVHLHTRIGLHARSLNNPTFTEEQNNKILATSVGKVIFNEIIPDSFAYINEPTQENLEDKTPDKYFVDPTQLGEGGLKAYFEEQELTAPFNKKFLGNIIAEVFNRFSITDTSMMLDRMKDLGFKFSSKAGITVGVSDIVVLPDKQQILDEHEKLVERVSKQFNRGLITEDERYNAVVEIWTDAKDQIQGELMQSLEKTNPIFMMSDSGARGNASNFTQLAGMRGLMAAPSGKIIELPITSSFREGLTVLEYFISTHGARKGLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLLVSDIKEGTEMIEPFIERIEGRYSKETIRHPETDEIIIRPDELITPEIAKKITDAGIEKMYIRSAFTCNTRHGVCEKCYGKNLATGEKVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRIQEIFEARNPKGQAVITEIEGVVEDIKLAKDRQQEIVIKGANETRSYLASGTSRIKVEIGQSVERGEVLTEGSIEPKNFLAVAGLNATESYLLKEVQKVYRMQGVEIDDKHVEVMVRQMLRKVRIIEAGDTKLLPGSLVDIHNFTDANREAFKERKRPATAKPVLLGITKASLETESFLSAASFQETTRVLTDAAIKGKRDDLLGLKENVIIGKLIPAGTGMRRYSDVKYDKVGTPVAEADEAEVTE . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 26852 30472 . - 0 GCA_005502385.1_00290 GCA_005502385.1_00290_gene,GCA_005502385.1_00290_mRNA GCA_005502385.1_00290 DNA-directed RNA polymerase subunit beta' GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MIDVNNFHYMKIGLASPEKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWECSCGKYKRVRYKGMVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDMSPRSLEEVIYFASYVVVDPGPTGLEKKSLLSEAEFREYYDKYPGQFVAKMGAEGIKDLLEEIDLDEELKALRDELESATGQRLTRAIKRLEVVESFRNSGNNPSWMILDVLPIIPPEIRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIAVGPNLKMYQCGLPKEMALELFKPFVMKELVQREIATNIKNAKSKIERMDDEVWDVLEDVIKEHPVLLNRAPTLHRLGIQAFEPTLVEGRAIRLHPLVTTAYNADFDGDQMAVHVPLSKEAQAEARMLMLAAQNILNPKDGKPVVTPSQDMVLGNYYLTLERKDAVNTGIIFNDTNEVLKAYANGYVHLHTRIGLHARSLNNPTFTEEQNNKILATSVGKVIFNEIIPDSFAYINEPTQENLEDKTPDKYFVDPTQLGEGGLKAYFEEQELTAPFNKKFLGNIIAEVFNRFSITDTSMMLDRMKDLGFKFSSKAGITVGVSDIVVLPDKQQILDEHEKLVERVSKQFNRGLITEDERYNAVVEIWTDAKDQIQGELMQSLEKTNPIFMMSDSGARGNASNFTQLAGMRGLMAAPSGKIIELPITSSFREGLTVLEYFISTHGARKGLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLLVSDIKEGTEMIEPFIERIEGRYSKETIRHPETDEIIIRPDELITPEIAKKITDAGIEKMYIRSAFTCNTRHGVCEKCYGKNLATGEKVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRIQEIFEARNPKGQAVITEIEGVVEDIKLAKDRQQEIVIKGANETRSYLASGTSRIKVEIGQSVERGEVLTEGSIEPKNFLAVAGLNATESYLLKEVQKVYRMQGVEIDDKHVEVMVRQMLRKVRIIEAGDTKLLPGSLVDIHNFTDANREAFKERKRPATAKPVLLGITKASLETESFLSAASFQETTRVLTDAAIKGKRDDLLGLKENVIIGKLIPAGTGMRRYSDVKYDKVGTPVAEADEAEVTE persistent 1206 rpoC DNA-directed RNA polymerase subunit beta' 2.7.7.6 GO:0000287,GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351,GO:0008270 COG0086,K UniRef50_P37871,UniRef90_Q2G0N5 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 30635 34186 . - . GCA_005502385.1_00291_gene GCA_005502385.1_00291 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAGQVVQYGRHRKRRNYARISEVLELPNLIEIQTKSYDWFLKEGLLEMFRDISPIEDFTGNLSLEFVDYRLGEPKYDLEESKNRDATYAAPLRVKVRLIIKETGEVKEQEVFMGDFPLMTDTGTFVINGAERVIVSQLVRSPSVYFNEKIDKNGRENYDATIIPNRGAWLEYETDAKDIVYVRIDRTRKLPLTVLLRALGFSSDQEIIDLLGDSEYLRNTLEKDSTENTEQALLEIYERLRPGEPPTVENAKSLLYSRFFDPKRYDLASVGRYKTNKKLHLKHRLFNQKLAEPIVDSETGEIVAEEGTVLDRRKLDEIMNVLESNANSEVFELEGSVIDEPVEIQSIKVYVPNDEEERTTTVIGNALPDSEVKCITPADIIASMSYFFNLLNGIGYTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTDSITPQQLINIRPVIASIKEFFGSSQLSQFMDQANPLAELTHKRRLSALGPGGLTRERAQMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYARVNEFGFIETPYRKVDIDTNSITDQIDYLTADEEDSYVVAQANSRLDENGRFLDDEVVCRFRGNNTVMAKEKMDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMNPEAPFVGTGMEHVAARDSGAAITAKHRGRVEHVESNEILVRRLVEENGTEHEGELDRYPLAKFKRSNSGTCYNQRPIVSVGDVVEYNEILADGPSMELGEMALGRNVVVGFMTWDGYNYEDAVIMSERLVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVSENALKNLDDRGIIYVGAEVKDGDILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKVFNREEGDDTLSPGVNQLVRVYIVQKRKIHVGDKMCGRHGNKGVISKIVPEEDMPYLPDGRPIDIMLNPLGVPSRMNIGQVLELHLGMAAKNLGIHVASPVFDGANDDDVWSTIEEAGMARDGKTVLYDGRTGEPFDNRISVGVMYMLKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTYKSDDTVGRVKTYESIVKGENISRPSVPESFRVLMKELQSLGLDVKVMDEHDNEIEMADVDDEDATERKVDLQQKDVPETQKETNE . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 30635 34186 . - . GCA_005502385.1_00291_mRNA GCA_005502385.1_00291 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAGQVVQYGRHRKRRNYARISEVLELPNLIEIQTKSYDWFLKEGLLEMFRDISPIEDFTGNLSLEFVDYRLGEPKYDLEESKNRDATYAAPLRVKVRLIIKETGEVKEQEVFMGDFPLMTDTGTFVINGAERVIVSQLVRSPSVYFNEKIDKNGRENYDATIIPNRGAWLEYETDAKDIVYVRIDRTRKLPLTVLLRALGFSSDQEIIDLLGDSEYLRNTLEKDSTENTEQALLEIYERLRPGEPPTVENAKSLLYSRFFDPKRYDLASVGRYKTNKKLHLKHRLFNQKLAEPIVDSETGEIVAEEGTVLDRRKLDEIMNVLESNANSEVFELEGSVIDEPVEIQSIKVYVPNDEEERTTTVIGNALPDSEVKCITPADIIASMSYFFNLLNGIGYTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTDSITPQQLINIRPVIASIKEFFGSSQLSQFMDQANPLAELTHKRRLSALGPGGLTRERAQMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYARVNEFGFIETPYRKVDIDTNSITDQIDYLTADEEDSYVVAQANSRLDENGRFLDDEVVCRFRGNNTVMAKEKMDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMNPEAPFVGTGMEHVAARDSGAAITAKHRGRVEHVESNEILVRRLVEENGTEHEGELDRYPLAKFKRSNSGTCYNQRPIVSVGDVVEYNEILADGPSMELGEMALGRNVVVGFMTWDGYNYEDAVIMSERLVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVSENALKNLDDRGIIYVGAEVKDGDILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKVFNREEGDDTLSPGVNQLVRVYIVQKRKIHVGDKMCGRHGNKGVISKIVPEEDMPYLPDGRPIDIMLNPLGVPSRMNIGQVLELHLGMAAKNLGIHVASPVFDGANDDDVWSTIEEAGMARDGKTVLYDGRTGEPFDNRISVGVMYMLKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTYKSDDTVGRVKTYESIVKGENISRPSVPESFRVLMKELQSLGLDVKVMDEHDNEIEMADVDDEDATERKVDLQQKDVPETQKETNE . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 30635 34186 . - 0 GCA_005502385.1_00291 GCA_005502385.1_00291_gene,GCA_005502385.1_00291_mRNA GCA_005502385.1_00291 DNA-directed RNA polymerase subunit beta GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAGQVVQYGRHRKRRNYARISEVLELPNLIEIQTKSYDWFLKEGLLEMFRDISPIEDFTGNLSLEFVDYRLGEPKYDLEESKNRDATYAAPLRVKVRLIIKETGEVKEQEVFMGDFPLMTDTGTFVINGAERVIVSQLVRSPSVYFNEKIDKNGRENYDATIIPNRGAWLEYETDAKDIVYVRIDRTRKLPLTVLLRALGFSSDQEIIDLLGDSEYLRNTLEKDSTENTEQALLEIYERLRPGEPPTVENAKSLLYSRFFDPKRYDLASVGRYKTNKKLHLKHRLFNQKLAEPIVDSETGEIVAEEGTVLDRRKLDEIMNVLESNANSEVFELEGSVIDEPVEIQSIKVYVPNDEEERTTTVIGNALPDSEVKCITPADIIASMSYFFNLLNGIGYTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTDSITPQQLINIRPVIASIKEFFGSSQLSQFMDQANPLAELTHKRRLSALGPGGLTRERAQMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYARVNEFGFIETPYRKVDIDTNSITDQIDYLTADEEDSYVVAQANSRLDENGRFLDDEVVCRFRGNNTVMAKEKMDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMNPEAPFVGTGMEHVAARDSGAAITAKHRGRVEHVESNEILVRRLVEENGTEHEGELDRYPLAKFKRSNSGTCYNQRPIVSVGDVVEYNEILADGPSMELGEMALGRNVVVGFMTWDGYNYEDAVIMSERLVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVSENALKNLDDRGIIYVGAEVKDGDILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKVFNREEGDDTLSPGVNQLVRVYIVQKRKIHVGDKMCGRHGNKGVISKIVPEEDMPYLPDGRPIDIMLNPLGVPSRMNIGQVLELHLGMAAKNLGIHVASPVFDGANDDDVWSTIEEAGMARDGKTVLYDGRTGEPFDNRISVGVMYMLKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTYKSDDTVGRVKTYESIVKGENISRPSVPESFRVLMKELQSLGLDVKVMDEHDNEIEMADVDDEDATERKVDLQQKDVPETQKETNE persistent 1183 rpoB DNA-directed RNA polymerase subunit beta 2.7.7.6 GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351,GO:0032549 COG0085,K WP_002449020.1 UPI00019FCE60 UniRef100_A0A8X8GT74,UniRef50_P47768,UniRef90_P47768 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 34390 34998 . - . GCA_005502385.1_00292_gene GCA_005502385.1_00292 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSHYYDENPEVQSDEKTIQYFYHKSQLKLTTDAGVFSKGKVDFGSDLLVRTFLNEHPPGPSKRIIDVGCGYGPIGLMIAKVSPHHQMTMVDVNHRALHLAEKNKKQNQIDNVIITESDGLSQVENEYFDFVLTNPPIRAGKNVVHRIFEEAYQKLKNQGELYVVIQKKQGMPSAKKKMEEIFNNVETVNKSKGYYILKSQKG . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 34390 34998 . - . GCA_005502385.1_00292_mRNA GCA_005502385.1_00292 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSHYYDENPEVQSDEKTIQYFYHKSQLKLTTDAGVFSKGKVDFGSDLLVRTFLNEHPPGPSKRIIDVGCGYGPIGLMIAKVSPHHQMTMVDVNHRALHLAEKNKKQNQIDNVIITESDGLSQVENEYFDFVLTNPPIRAGKNVVHRIFEEAYQKLKNQGELYVVIQKKQGMPSAKKKMEEIFNNVETVNKSKGYYILKSQKG . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 34390 34998 . - 0 GCA_005502385.1_00292 GCA_005502385.1_00292_gene,GCA_005502385.1_00292_mRNA GCA_005502385.1_00292 Ribosomal RNA large subunit methyltransferase G GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSHYYDENPEVQSDEKTIQYFYHKSQLKLTTDAGVFSKGKVDFGSDLLVRTFLNEHPPGPSKRIIDVGCGYGPIGLMIAKVSPHHQMTMVDVNHRALHLAEKNKKQNQIDNVIITESDGLSQVENEYFDFVLTNPPIRAGKNVVHRIFEEAYQKLKNQGELYVVIQKKQGMPSAKKKMEEIFNNVETVNKSKGYYILKSQKG persistent 202 Methyltransferase WP_017175316.1 UPI00031BFAE8 UniRef100_A0A3S7GY39,UniRef50_A0A556PLC6,UniRef90_A0AAE5JJI8 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 35280 35648 . - . GCA_005502385.1_00293_gene GCA_005502385.1_00293 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MANQEQIIEAIKEMSVLELNDLVKAIEEEFGVTAAAPVAAAGAAGGGDAGAEKTEFDVELTSAGSSKIKVVKAVKEATGLGLKDAKELVDNAPKVIKEAVAKEDAEKLKEQLEEVGATVELK . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 35280 35648 . - . GCA_005502385.1_00293_mRNA GCA_005502385.1_00293 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MANQEQIIEAIKEMSVLELNDLVKAIEEEFGVTAAAPVAAAGAAGGGDAGAEKTEFDVELTSAGSSKIKVVKAVKEATGLGLKDAKELVDNAPKVIKEAVAKEDAEKLKEQLEEVGATVELK . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 35280 35648 . - 0 GCA_005502385.1_00293 GCA_005502385.1_00293_gene,GCA_005502385.1_00293_mRNA GCA_005502385.1_00293 50S ribosomal protein L7/L12 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MANQEQIIEAIKEMSVLELNDLVKAIEEEFGVTAAAPVAAAGAAGGGDAGAEKTEFDVELTSAGSSKIKVVKAVKEATGLGLKDAKELVDNAPKVIKEAVAKEDAEKLKEQLEEVGATVELK persistent 122 rplL 50S ribosomal protein L7/L12 GO:0003729,GO:0003735,GO:0005840,GO:0006412,GO:0022625 COG0222,J WP_002488409.1 UPI00024E1B02 UniRef100_A0A657ZQ88,UniRef50_P48860,UniRef90_P48860 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 35688 36188 . - . GCA_005502385.1_00294_gene GCA_005502385.1_00294 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSAIIEAKKQQVDVIAEQLKNSVSTVIVDYRGLTVAEVTDLRAQLREAGVEYKVYKNTLVRRAAEKAGIEGLDEFLTGPTAIATTTDDVVAPAKVISGFAKEHEALEIKTGVMEGNVISAEEVKTVGSLPSHDGLVSMLLSVLQAPVRNFAYAVKAVGEQKEESAE . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 35688 36188 . - . GCA_005502385.1_00294_mRNA GCA_005502385.1_00294 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSAIIEAKKQQVDVIAEQLKNSVSTVIVDYRGLTVAEVTDLRAQLREAGVEYKVYKNTLVRRAAEKAGIEGLDEFLTGPTAIATTTDDVVAPAKVISGFAKEHEALEIKTGVMEGNVISAEEVKTVGSLPSHDGLVSMLLSVLQAPVRNFAYAVKAVGEQKEESAE . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 35688 36188 . - 0 GCA_005502385.1_00294 GCA_005502385.1_00294_gene,GCA_005502385.1_00294_mRNA GCA_005502385.1_00294 50S ribosomal protein L10 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSAIIEAKKQQVDVIAEQLKNSVSTVIVDYRGLTVAEVTDLRAQLREAGVEYKVYKNTLVRRAAEKAGIEGLDEFLTGPTAIATTTDDVVAPAKVISGFAKEHEALEIKTGVMEGNVISAEEVKTVGSLPSHDGLVSMLLSVLQAPVRNFAYAVKAVGEQKEESAE persistent 166 rplJ 50S ribosomal protein L10 GO:0003735,GO:0006412,GO:0015934,GO:0070180 COG0244,J WP_002449049.1 UPI00019FCE63 UniRef100_A0A1L8Y4V5,UniRef50_P66042,UniRef90_Q2G0N9 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 36219 36372 . - . GCA_005502385.1_00295_gene GCA_005502385.1_00295 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 36219 36372 . - . GCA_005502385.1_00295_mRNA GCA_005502385.1_00295 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 . . . . . . . GCA_005502385.1|SCOV01000013.1 Infernal:001001 misc_RNA 36219 36372 84.4 - . GCA_005502385.1_00295 GCA_005502385.1_00295_gene,GCA_005502385.1_00295_mRNA GCA_005502385.1_00295 L10_leader GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 36501 37196 . - . GCA_005502385.1_00296_gene GCA_005502385.1_00296 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAKKGKKYQEAANKVDRTKYYSVEEAIKLAKETSIANFDASVEVAFRLGIDTRKNDQQIRGAVVLPNGTGKSQRVLVFAKGDKITEAEEAGADYVGESEYAQKIQQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKAGIVHATIGKVSFDEEKLVENFNALQDVLAKAKPASAKGTYFKSVAVTTTMGPGVKVDTSAFKL . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 36501 37196 . - . GCA_005502385.1_00296_mRNA GCA_005502385.1_00296 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAKKGKKYQEAANKVDRTKYYSVEEAIKLAKETSIANFDASVEVAFRLGIDTRKNDQQIRGAVVLPNGTGKSQRVLVFAKGDKITEAEEAGADYVGESEYAQKIQQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKAGIVHATIGKVSFDEEKLVENFNALQDVLAKAKPASAKGTYFKSVAVTTTMGPGVKVDTSAFKL . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 36501 37196 . - 0 GCA_005502385.1_00296 GCA_005502385.1_00296_gene,GCA_005502385.1_00296_mRNA GCA_005502385.1_00296 50S ribosomal protein L1 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAKKGKKYQEAANKVDRTKYYSVEEAIKLAKETSIANFDASVEVAFRLGIDTRKNDQQIRGAVVLPNGTGKSQRVLVFAKGDKITEAEEAGADYVGESEYAQKIQQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKAGIVHATIGKVSFDEEKLVENFNALQDVLAKAKPASAKGTYFKSVAVTTTMGPGVKVDTSAFKL persistent 231 rplA 50S ribosomal protein L1 GO:0000049,GO:0003723,GO:0003735,GO:0006412,GO:0006417,GO:0015934,GO:0019843 COG0081,J WP_017175315.1 UPI00030A64A3 UniRef100_A0A4Q9WUN2,UniRef50_Q5M2K0,UniRef90_Q2G0P0 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 37403 37825 . - . GCA_005502385.1_00297_gene GCA_005502385.1_00297 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAKKVEKVVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTQEQAGLIIPVEISVYEDRSFTFITKTPPAPVLLKKAAGVEKGSGEPNKTKVATVTKDQVREIAQTKMQDLNAADEEAAMRIIEGTARSMGITVQ . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 37403 37825 . - . GCA_005502385.1_00297_mRNA GCA_005502385.1_00297 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAKKVEKVVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTQEQAGLIIPVEISVYEDRSFTFITKTPPAPVLLKKAAGVEKGSGEPNKTKVATVTKDQVREIAQTKMQDLNAADEEAAMRIIEGTARSMGITVQ . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 37403 37825 . - 0 GCA_005502385.1_00297 GCA_005502385.1_00297_gene,GCA_005502385.1_00297_mRNA GCA_005502385.1_00297 50S ribosomal protein L11 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAKKVEKVVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTQEQAGLIIPVEISVYEDRSFTFITKTPPAPVLLKKAAGVEKGSGEPNKTKVATVTKDQVREIAQTKMQDLNAADEEAAMRIIEGTARSMGITVQ persistent 140 rplK 50S ribosomal protein L11 GO:0003735,GO:0005840,GO:0006412,GO:0022625,GO:0070180 COG0080,J WP_001832298.1 UPI00000E4CEE UniRef100_Q5HRL5,UniRef50_P0A0F4,UniRef90_P0A0F4 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 38012 38560 . - . GCA_005502385.1_00298_gene GCA_005502385.1_00298 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSEEVGTKRWYAVHTYSGYENKVKKNLEKRVESMNMTEQIFRVVIPEEEETQVKDGKAKKQVKKTFPGYVLVELIMTDESWYVVRNTPGVTGFVGSAGAGSKPNPLLPEEMRFILKQMGLKEKTIDVELDVGEQVRIKSGPFANQVGEVQEIEADKFKLTVLVDMFGRETPVEVEFDQIEKL . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 38012 38560 . - . GCA_005502385.1_00298_mRNA GCA_005502385.1_00298 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSEEVGTKRWYAVHTYSGYENKVKKNLEKRVESMNMTEQIFRVVIPEEEETQVKDGKAKKQVKKTFPGYVLVELIMTDESWYVVRNTPGVTGFVGSAGAGSKPNPLLPEEMRFILKQMGLKEKTIDVELDVGEQVRIKSGPFANQVGEVQEIEADKFKLTVLVDMFGRETPVEVEFDQIEKL . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 38012 38560 . - 0 GCA_005502385.1_00298 GCA_005502385.1_00298_gene,GCA_005502385.1_00298_mRNA GCA_005502385.1_00298 Transcription termination/antitermination protein NusG GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSEEVGTKRWYAVHTYSGYENKVKKNLEKRVESMNMTEQIFRVVIPEEEETQVKDGKAKKQVKKTFPGYVLVELIMTDESWYVVRNTPGVTGFVGSAGAGSKPNPLLPEEMRFILKQMGLKEKTIDVELDVGEQVRIKSGPFANQVGEVQEIEADKFKLTVLVDMFGRETPVEVEFDQIEKL persistent 182 nusG transcription termination/antitermination protein NusG GO:0005829,GO:0006353,GO:0031564,GO:0032784,GO:0140673 COG0250,K WP_017175314.1 UPI0003051C23 UniRef100_A0A3S7GUN4,UniRef50_Q2G0P2,UniRef90_Q2G0P2 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 38578 38778 . - . GCA_005502385.1_00299_gene GCA_005502385.1_00299 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAKDKDASKNKESFFQGVKSEMEKTSWPTKEELFKYTVIVVATVIFFMVFFWVLDVGIGNLIELFR . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 38578 38778 . - . GCA_005502385.1_00299_mRNA GCA_005502385.1_00299 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAKDKDASKNKESFFQGVKSEMEKTSWPTKEELFKYTVIVVATVIFFMVFFWVLDVGIGNLIELFR . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 38578 38778 . - 0 GCA_005502385.1_00299 GCA_005502385.1_00299_gene,GCA_005502385.1_00299_mRNA GCA_005502385.1_00299 Protein translocase subunit SecE GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAKDKDASKNKESFFQGVKSEMEKTSWPTKEELFKYTVIVVATVIFFMVFFWVLDVGIGNLIELFR persistent 66 secE preprotein translocase subunit SecE GO:0005886,GO:0009306,GO:0015450,GO:0043952 WP_017175313.1 UPI0002F28D06 UniRef100_A0A4Q9WS17,UniRef50_P0A0I4,UniRef90_A0A974QMV8 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 39046 39636 . - . GCA_005502385.1_00300_gene GCA_005502385.1_00300 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MTYHFRQLEDIFKAFQYSQNTLEKEQLFANIMNVIRPKLMMKFRMLGIDHQELEDLIQDTSLKIYLALHTFNFNTNVPFEHYLNRLVYSVKKDFWRKRYAFNQRQQLLINECVVEYRLNQMIKRTEELYLTRLSKEDLIDSFKKLSMFEREVANLLLLDYSPSEIAKRLNVKDKVVYNSIQRCKIKMKQYLLKYKC . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 39046 39636 . - . GCA_005502385.1_00300_mRNA GCA_005502385.1_00300 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MTYHFRQLEDIFKAFQYSQNTLEKEQLFANIMNVIRPKLMMKFRMLGIDHQELEDLIQDTSLKIYLALHTFNFNTNVPFEHYLNRLVYSVKKDFWRKRYAFNQRQQLLINECVVEYRLNQMIKRTEELYLTRLSKEDLIDSFKKLSMFEREVANLLLLDYSPSEIAKRLNVKDKVVYNSIQRCKIKMKQYLLKYKC . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 39046 39636 . - 0 GCA_005502385.1_00300 GCA_005502385.1_00300_gene,GCA_005502385.1_00300_mRNA GCA_005502385.1_00300 hypothetical protein GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MTYHFRQLEDIFKAFQYSQNTLEKEQLFANIMNVIRPKLMMKFRMLGIDHQELEDLIQDTSLKIYLALHTFNFNTNVPFEHYLNRLVYSVKKDFWRKRYAFNQRQQLLINECVVEYRLNQMIKRTEELYLTRLSKEDLIDSFKKLSMFEREVANLLLLDYSPSEIAKRLNVKDKVVYNSIQRCKIKMKQYLLKYKC persistent 196 sigS RNA polymerase sigma factor SigS WP_017175312.1 UPI000312862F UniRef100_A0A3S7GYR1,UniRef50_A0A3S7GYR1,UniRef90_A0A3S7GYR1 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 39704 40234 . - . GCA_005502385.1_00301_gene GCA_005502385.1_00301 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MKDRYLIIDGYNMIGQSRKLSKVARESLEEAREQLLDVIANYNAVVADEIVCVFDAYEQSGIEREYMYHGVKTVFTKEKETADSYIERYVYNLYNKHTTHITVVTSDMSEQHAIFGAGAYRVSSREMWRDLKENAMTVSKSVDDFNERKPRTRISLSKDVLAEFEKIRRGYGKKHK . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 39704 40234 . - . GCA_005502385.1_00301_mRNA GCA_005502385.1_00301 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MKDRYLIIDGYNMIGQSRKLSKVARESLEEAREQLLDVIANYNAVVADEIVCVFDAYEQSGIEREYMYHGVKTVFTKEKETADSYIERYVYNLYNKHTTHITVVTSDMSEQHAIFGAGAYRVSSREMWRDLKENAMTVSKSVDDFNERKPRTRISLSKDVLAEFEKIRRGYGKKHK . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 39704 40234 . - 0 GCA_005502385.1_00301 GCA_005502385.1_00301_gene,GCA_005502385.1_00301_mRNA GCA_005502385.1_00301 putative protein YacP GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MKDRYLIIDGYNMIGQSRKLSKVARESLEEAREQLLDVIANYNAVVADEIVCVFDAYEQSGIEREYMYHGVKTVFTKEKETADSYIERYVYNLYNKHTTHITVVTSDMSEQHAIFGAGAYRVSSREMWRDLKENAMTVSKSVDDFNERKPRTRISLSKDVLAEFEKIRRGYGKKHK persistent 176 NYN domain-containing protein WP_070517438.1 UPI0008A3DE1B UniRef100_UPI0008A3DE1B,UniRef50_Q49V42,UniRef90_A0AAE5JJN1 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 40231 40980 . - . GCA_005502385.1_00302_gene GCA_005502385.1_00302 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MEDIVIVGRHAVKEAIVSGHTINKIWIQEGIKKQQINDILKNAKAQKLIIQTVPKSKLDNLANAPHQGVAALIAPYEYADFDQFIQSQKEKEGLSTIIILDGLEDPHNLGSIIRTADASGVDGVIIPKRRSVALTQTVAKASTGAIQHVPVMRVTNLSKIIDELKDNGYWVAGAEADNATDYRNMAADMPLAIVIGSEGQGMSRLVKDKCDFYIKIPMVGHVNSLNASVAASLMMYEVYRKRHQIGDTQ . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 40231 40980 . - . GCA_005502385.1_00302_mRNA GCA_005502385.1_00302 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MEDIVIVGRHAVKEAIVSGHTINKIWIQEGIKKQQINDILKNAKAQKLIIQTVPKSKLDNLANAPHQGVAALIAPYEYADFDQFIQSQKEKEGLSTIIILDGLEDPHNLGSIIRTADASGVDGVIIPKRRSVALTQTVAKASTGAIQHVPVMRVTNLSKIIDELKDNGYWVAGAEADNATDYRNMAADMPLAIVIGSEGQGMSRLVKDKCDFYIKIPMVGHVNSLNASVAASLMMYEVYRKRHQIGDTQ . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 40231 40980 . - 0 GCA_005502385.1_00302 GCA_005502385.1_00302_gene,GCA_005502385.1_00302_mRNA GCA_005502385.1_00302 Putative TrmH family tRNA/rRNA methyltransferase GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MEDIVIVGRHAVKEAIVSGHTINKIWIQEGIKKQQINDILKNAKAQKLIIQTVPKSKLDNLANAPHQGVAALIAPYEYADFDQFIQSQKEKEGLSTIIILDGLEDPHNLGSIIRTADASGVDGVIIPKRRSVALTQTVAKASTGAIQHVPVMRVTNLSKIIDELKDNGYWVAGAEADNATDYRNMAADMPLAIVIGSEGQGMSRLVKDKCDFYIKIPMVGHVNSLNASVAASLMMYEVYRKRHQIGDTQ persistent 249 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB 2.1.1.- GO:0003723,GO:0005829,GO:0006396,GO:0008173,GO:0032259 COG0566,J WP_070517437.1 UPI0008A5E010 UniRef100_UPI0008A5E010,UniRef50_Q49V41,UniRef90_Q4L3J1 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 40989 41375 . - . GCA_005502385.1_00303_gene GCA_005502385.1_00303 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MDAKLLNPLTLAYMGDAVLDQHVREYIVLKLQSKPNRLHQVSKQYVSAKSQAQTLEVLITKEWFTEEELDIVRRGRNAKSYTKAKNTDVQTYRKSSGLEAVIGFLYLDHQNERLEALLDTIVQIVDER . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 40989 41375 . - . GCA_005502385.1_00303_mRNA GCA_005502385.1_00303 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MDAKLLNPLTLAYMGDAVLDQHVREYIVLKLQSKPNRLHQVSKQYVSAKSQAQTLEVLITKEWFTEEELDIVRRGRNAKSYTKAKNTDVQTYRKSSGLEAVIGFLYLDHQNERLEALLDTIVQIVDER . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 40989 41375 . - 0 GCA_005502385.1_00303 GCA_005502385.1_00303_gene,GCA_005502385.1_00303_mRNA GCA_005502385.1_00303 Mini-ribonuclease 3 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MDAKLLNPLTLAYMGDAVLDQHVREYIVLKLQSKPNRLHQVSKQYVSAKSQAQTLEVLITKEWFTEEELDIVRRGRNAKSYTKAKNTDVQTYRKSSGLEAVIGFLYLDHQNERLEALLDTIVQIVDER persistent 128 Mini-ribonuclease 3 WP_070517435.1 UPI0008A5F7E0 UniRef100_UPI0008A5F7E0,UniRef50_Q2G2M4,UniRef90_A0A6N0I338 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 41377 42777 . - . GCA_005502385.1_00304_gene GCA_005502385.1_00304 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYTVDYVSNFTDVDDKLINRSKELNESVPEIADRYIKAFYEDVGALNVKRATSNPRVMNHMDEIIDFIKQLVDEGYAYESNGDVYFRTRKFDGYGKLSHQSIDDLKVGARIEAGEQKEDALDFTLWKKAKPGEISWESPFGQGRPGWHIECSVMAYHELGKTIDIHAGGSDLQFPHHENEIAQSEAHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDIIKEIDPDVLRFFMISVHYRSPINYNVELVNAAKSGLERIRNSYQLIKEREAIATDLETQTDYIDQINDILKQFEAVMDDDFNTANAVTAWYDLSKLANKYVLENTTSTKVIHRFKEVYHIFSDVLGVPLEGKENDVLLDEDIEKLIEERNEARKNKDFARADEIRDMLKEQNIILEDTPQGVRFRRG . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 41377 42777 . - . GCA_005502385.1_00304_mRNA GCA_005502385.1_00304 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYTVDYVSNFTDVDDKLINRSKELNESVPEIADRYIKAFYEDVGALNVKRATSNPRVMNHMDEIIDFIKQLVDEGYAYESNGDVYFRTRKFDGYGKLSHQSIDDLKVGARIEAGEQKEDALDFTLWKKAKPGEISWESPFGQGRPGWHIECSVMAYHELGKTIDIHAGGSDLQFPHHENEIAQSEAHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDIIKEIDPDVLRFFMISVHYRSPINYNVELVNAAKSGLERIRNSYQLIKEREAIATDLETQTDYIDQINDILKQFEAVMDDDFNTANAVTAWYDLSKLANKYVLENTTSTKVIHRFKEVYHIFSDVLGVPLEGKENDVLLDEDIEKLIEERNEARKNKDFARADEIRDMLKEQNIILEDTPQGVRFRRG . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 41377 42777 . - 0 GCA_005502385.1_00304 GCA_005502385.1_00304_gene,GCA_005502385.1_00304_mRNA GCA_005502385.1_00304 Cysteine--tRNA ligase GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYTVDYVSNFTDVDDKLINRSKELNESVPEIADRYIKAFYEDVGALNVKRATSNPRVMNHMDEIIDFIKQLVDEGYAYESNGDVYFRTRKFDGYGKLSHQSIDDLKVGARIEAGEQKEDALDFTLWKKAKPGEISWESPFGQGRPGWHIECSVMAYHELGKTIDIHAGGSDLQFPHHENEIAQSEAHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDIIKEIDPDVLRFFMISVHYRSPINYNVELVNAAKSGLERIRNSYQLIKEREAIATDLETQTDYIDQINDILKQFEAVMDDDFNTANAVTAWYDLSKLANKYVLENTTSTKVIHRFKEVYHIFSDVLGVPLEGKENDVLLDEDIEKLIEERNEARKNKDFARADEIRDMLKEQNIILEDTPQGVRFRRG persistent 466 cysS cysteine--tRNA ligase 6.1.1.16 GO:0004817,GO:0005524,GO:0005737,GO:0006423 WP_070517433.1 UPI0008A37C44 UniRef100_UPI0008A37C44,UniRef50_Q06752,UniRef90_A0A853V3S8 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 42761 43402 . - . GCA_005502385.1_00305_gene GCA_005502385.1_00305 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MIKRMKDDVKMVFEQDPAARTTFEVITTYAGLHAVWSHLIAHKLYNKKHYVLARMISQVSRFFTGIEIHPGAKIGKRLFIDHGMGVVIGETCTIGDNVTIYQGVTLGGTGKQKGKRHPDIGDNVLIAAGSKVLGNIQINSNVNIGANSVVLQSVPSYTTVVGIPGHIVKQEGKRIGKTFDHRNLPDPLFEQIKQLERQLEKAKNGEIKDDYII . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 42761 43402 . - . GCA_005502385.1_00305_mRNA GCA_005502385.1_00305 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MIKRMKDDVKMVFEQDPAARTTFEVITTYAGLHAVWSHLIAHKLYNKKHYVLARMISQVSRFFTGIEIHPGAKIGKRLFIDHGMGVVIGETCTIGDNVTIYQGVTLGGTGKQKGKRHPDIGDNVLIAAGSKVLGNIQINSNVNIGANSVVLQSVPSYTTVVGIPGHIVKQEGKRIGKTFDHRNLPDPLFEQIKQLERQLEKAKNGEIKDDYII . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 42761 43402 . - 0 GCA_005502385.1_00305 GCA_005502385.1_00305_gene,GCA_005502385.1_00305_mRNA GCA_005502385.1_00305 Serine acetyltransferase GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MIKRMKDDVKMVFEQDPAARTTFEVITTYAGLHAVWSHLIAHKLYNKKHYVLARMISQVSRFFTGIEIHPGAKIGKRLFIDHGMGVVIGETCTIGDNVTIYQGVTLGGTGKQKGKRHPDIGDNVLIAAGSKVLGNIQINSNVNIGANSVVLQSVPSYTTVVGIPGHIVKQEGKRIGKTFDHRNLPDPLFEQIKQLERQLEKAKNGEIKDDYII persistent 213 cysE serine O-acetyltransferase 2.3.1.30 GO:0005737,GO:0006535,GO:0009001 COG1045,E UPI0002E48544 UniRef100_A0A3S7GUM9,UniRef50_A0A938X8R1,UniRef90_A0A2A1KAF8 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 43777 45231 . - . GCA_005502385.1_00306_gene GCA_005502385.1_00306 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSERVRVRYAPSPTGYLHIGNARTALFNYLFAKHYDGDFVVRIEDTDSKRNLEDGESSQFDNLKWLGLDWDESIDKDKGHGPYRQSERADIYNPLIQQLLDEDKAYKCYMTEEELEEEREAQIARGEMPRYGGKHAHLTEEQRQQFEVEGRKPAIRFRVPKDKTYTFDDMVKGEISFDSNNIGDWVIVKKDGVPTYNFAVAVDDHYMEISDVIRGDDHVSNTPKQLMIYEAFGWESPRFAHMSLIVNEQRKKLSKRDGQILQFIEQYRDLGYLPEALFNFIALLGWSPEGEDEIFSKEEFIKIFDEQRLSKSPAMFDRQKLAWVNNQYMKTKDTETVFELALPHLIKANLIPENPSEEDKEWGRKLIGLYQKEMSYAGEIVPLSEMFFHDMPELGEEEQEVLNGEQVPELMSHLYGKLEALEPFEAAEIKKTIKEVQKETGIKGKQLFMPIRVAVTGQMHGPELPNTIEVLGKEKVLSRLKKYV . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 43777 45231 . - . GCA_005502385.1_00306_mRNA GCA_005502385.1_00306 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSERVRVRYAPSPTGYLHIGNARTALFNYLFAKHYDGDFVVRIEDTDSKRNLEDGESSQFDNLKWLGLDWDESIDKDKGHGPYRQSERADIYNPLIQQLLDEDKAYKCYMTEEELEEEREAQIARGEMPRYGGKHAHLTEEQRQQFEVEGRKPAIRFRVPKDKTYTFDDMVKGEISFDSNNIGDWVIVKKDGVPTYNFAVAVDDHYMEISDVIRGDDHVSNTPKQLMIYEAFGWESPRFAHMSLIVNEQRKKLSKRDGQILQFIEQYRDLGYLPEALFNFIALLGWSPEGEDEIFSKEEFIKIFDEQRLSKSPAMFDRQKLAWVNNQYMKTKDTETVFELALPHLIKANLIPENPSEEDKEWGRKLIGLYQKEMSYAGEIVPLSEMFFHDMPELGEEEQEVLNGEQVPELMSHLYGKLEALEPFEAAEIKKTIKEVQKETGIKGKQLFMPIRVAVTGQMHGPELPNTIEVLGKEKVLSRLKKYV . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 43777 45231 . - 0 GCA_005502385.1_00306 GCA_005502385.1_00306_gene,GCA_005502385.1_00306_mRNA GCA_005502385.1_00306 Glutamate--tRNA ligase GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSERVRVRYAPSPTGYLHIGNARTALFNYLFAKHYDGDFVVRIEDTDSKRNLEDGESSQFDNLKWLGLDWDESIDKDKGHGPYRQSERADIYNPLIQQLLDEDKAYKCYMTEEELEEEREAQIARGEMPRYGGKHAHLTEEQRQQFEVEGRKPAIRFRVPKDKTYTFDDMVKGEISFDSNNIGDWVIVKKDGVPTYNFAVAVDDHYMEISDVIRGDDHVSNTPKQLMIYEAFGWESPRFAHMSLIVNEQRKKLSKRDGQILQFIEQYRDLGYLPEALFNFIALLGWSPEGEDEIFSKEEFIKIFDEQRLSKSPAMFDRQKLAWVNNQYMKTKDTETVFELALPHLIKANLIPENPSEEDKEWGRKLIGLYQKEMSYAGEIVPLSEMFFHDMPELGEEEQEVLNGEQVPELMSHLYGKLEALEPFEAAEIKKTIKEVQKETGIKGKQLFMPIRVAVTGQMHGPELPNTIEVLGKEKVLSRLKKYV persistent 484 gltX glutamate--tRNA ligase 6.1.1.17 GO:0000049,GO:0000166,GO:0004818,GO:0005524,GO:0005829,GO:0006424,GO:0008270 COG0008,J WP_049382349.1 UPI00066AE370 UniRef100_UPI00066AE370,UniRef50_Q97NG1,UniRef90_Q5HRM5 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 45509 46582 . - . GCA_005502385.1_00307_gene GCA_005502385.1_00307 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MKVLKGIIIIIYIILGASFGIMLIPEILNDLGMNNHPIYTNHYVDGLIGMIVFFLIFGLFINKVTRLLKEAEIWIMQRSAVEILFATLGLVVGLFISVMVSFILEMIGNSILNHLVPIIITLLLCYLGFQFGLKKRDEMLMFLPENIARSMSKNNISAIPKLLDTSAIIDGRILDIIKCGFIDGEILIPQGVINELQVVADANDSIKREKGQRGLDILNQLYDLDYPTRVIHPQKSHSDIDKLLVELAQVYHAHVITTDFNLNKVCHVQGITALNVNDLSEAIKPNVHQGDRLNILLTKMGKEPGQGVGYLDDGTMVVVDHAKSLIGKQVELEVISLLQTSSGRIIFAKTIEESLSE . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 45509 46582 . - . GCA_005502385.1_00307_mRNA GCA_005502385.1_00307 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MKVLKGIIIIIYIILGASFGIMLIPEILNDLGMNNHPIYTNHYVDGLIGMIVFFLIFGLFINKVTRLLKEAEIWIMQRSAVEILFATLGLVVGLFISVMVSFILEMIGNSILNHLVPIIITLLLCYLGFQFGLKKRDEMLMFLPENIARSMSKNNISAIPKLLDTSAIIDGRILDIIKCGFIDGEILIPQGVINELQVVADANDSIKREKGQRGLDILNQLYDLDYPTRVIHPQKSHSDIDKLLVELAQVYHAHVITTDFNLNKVCHVQGITALNVNDLSEAIKPNVHQGDRLNILLTKMGKEPGQGVGYLDDGTMVVVDHAKSLIGKQVELEVISLLQTSSGRIIFAKTIEESLSE . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 45509 46582 . - 0 GCA_005502385.1_00307 GCA_005502385.1_00307_gene,GCA_005502385.1_00307_mRNA GCA_005502385.1_00307 putative PIN and TRAM-domain containing protein YacL GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MKVLKGIIIIIYIILGASFGIMLIPEILNDLGMNNHPIYTNHYVDGLIGMIVFFLIFGLFINKVTRLLKEAEIWIMQRSAVEILFATLGLVVGLFISVMVSFILEMIGNSILNHLVPIIITLLLCYLGFQFGLKKRDEMLMFLPENIARSMSKNNISAIPKLLDTSAIIDGRILDIIKCGFIDGEILIPQGVINELQVVADANDSIKREKGQRGLDILNQLYDLDYPTRVIHPQKSHSDIDKLLVELAQVYHAHVITTDFNLNKVCHVQGITALNVNDLSEAIKPNVHQGDRLNILLTKMGKEPGQGVGYLDDGTMVVVDHAKSLIGKQVELEVISLLQTSSGRIIFAKTIEESLSE persistent 357 PIN/TRAM domain-containing protein WP_017175305.1 UPI0002F65177 UniRef100_A0A3S7GUQ3,UniRef50_A0A9X6AJN5,UniRef90_A0A3S7GUQ3 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 46605 47978 . - . GCA_005502385.1_00308_gene GCA_005502385.1_00308 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAKKKVIFECMACGYQSPKWMGKCPNCGAWNQMEEIIEKTSNPKHGVKAKETQAKVQKLNSIKHEATPRVQTDSKEFNRVLGGGIVSGSLVLIGGDPGIGKSTLLLQICASLSQKLNVLYITGEESLNQTKLRADRLEEDSSNLNVLAETDLEVIHQTVEQERPDILVVDSIQTIYHPEISSAPGSVSQVRESTQSLMNIAKQMNIATFIVGHVTKEGQIAGPRLLEHMVDTVLYFEGDEHHAYRILRAVKNRFGSTNEMGIFEMKQSGLKGVQNPSEMFLEERSTNVPGSTIVATMEGTRPLLIEVQSLVTPTTFNNPRRMATGIDHNRLSLLMAVLEKKENYLLQQQDAYIKVAGGVRLTEPAVDLSIIVATASSFKDKAVDGLDCYIGEVGLTGEVRRVSRIEQRVQEAAKLGFKRVIIPQTNIGGWTFPEGVQVVGVTTVHDALTYAFSNRSS . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 46605 47978 . - . GCA_005502385.1_00308_mRNA GCA_005502385.1_00308 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAKKKVIFECMACGYQSPKWMGKCPNCGAWNQMEEIIEKTSNPKHGVKAKETQAKVQKLNSIKHEATPRVQTDSKEFNRVLGGGIVSGSLVLIGGDPGIGKSTLLLQICASLSQKLNVLYITGEESLNQTKLRADRLEEDSSNLNVLAETDLEVIHQTVEQERPDILVVDSIQTIYHPEISSAPGSVSQVRESTQSLMNIAKQMNIATFIVGHVTKEGQIAGPRLLEHMVDTVLYFEGDEHHAYRILRAVKNRFGSTNEMGIFEMKQSGLKGVQNPSEMFLEERSTNVPGSTIVATMEGTRPLLIEVQSLVTPTTFNNPRRMATGIDHNRLSLLMAVLEKKENYLLQQQDAYIKVAGGVRLTEPAVDLSIIVATASSFKDKAVDGLDCYIGEVGLTGEVRRVSRIEQRVQEAAKLGFKRVIIPQTNIGGWTFPEGVQVVGVTTVHDALTYAFSNRSS . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 46605 47978 . - 0 GCA_005502385.1_00308 GCA_005502385.1_00308_gene,GCA_005502385.1_00308_mRNA GCA_005502385.1_00308 DNA repair protein RadA GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MAKKKVIFECMACGYQSPKWMGKCPNCGAWNQMEEIIEKTSNPKHGVKAKETQAKVQKLNSIKHEATPRVQTDSKEFNRVLGGGIVSGSLVLIGGDPGIGKSTLLLQICASLSQKLNVLYITGEESLNQTKLRADRLEEDSSNLNVLAETDLEVIHQTVEQERPDILVVDSIQTIYHPEISSAPGSVSQVRESTQSLMNIAKQMNIATFIVGHVTKEGQIAGPRLLEHMVDTVLYFEGDEHHAYRILRAVKNRFGSTNEMGIFEMKQSGLKGVQNPSEMFLEERSTNVPGSTIVATMEGTRPLLIEVQSLVTPTTFNNPRRMATGIDHNRLSLLMAVLEKKENYLLQQQDAYIKVAGGVRLTEPAVDLSIIVATASSFKDKAVDGLDCYIGEVGLTGEVRRVSRIEQRVQEAAKLGFKRVIIPQTNIGGWTFPEGVQVVGVTTVHDALTYAFSNRSS persistent 457 radA DNA repair protein RadA GO:0003684,GO:0005524,GO:0006281 COG1066,L WP_017175304.1 UPI00031F655C UniRef100_A0A3S7GUP1,UniRef50_A5GDK5,UniRef90_A0A380G4B0 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 48112 50583 . - . GCA_005502385.1_00309_gene GCA_005502385.1_00309 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MLFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQEHSGTLHYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGSPEMNTKNATANKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKNKRVMSLDMGTVVAGTKYRGEFEERLKKVMDEIHHAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPIQVDEPSVEDTVAILKGLRDRYEAHHRINISDEALEAAAKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQSKLEKQYEDAKNEWKTSQGGQSTSLSKEDIAEVIAGWTGIPLTRINETESDRLLNLEETLHDRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGQDYETIRRTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTKRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPLIRSIQKTVEDNLSELILDGNQIEGKEVTIDHDGNEFKYDIHDKQENNIEDTKEPATEE . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 48112 50583 . - . GCA_005502385.1_00309_mRNA GCA_005502385.1_00309 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MLFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQEHSGTLHYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGSPEMNTKNATANKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKNKRVMSLDMGTVVAGTKYRGEFEERLKKVMDEIHHAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPIQVDEPSVEDTVAILKGLRDRYEAHHRINISDEALEAAAKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQSKLEKQYEDAKNEWKTSQGGQSTSLSKEDIAEVIAGWTGIPLTRINETESDRLLNLEETLHDRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGQDYETIRRTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTKRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPLIRSIQKTVEDNLSELILDGNQIEGKEVTIDHDGNEFKYDIHDKQENNIEDTKEPATEE . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 48112 50583 . - 0 GCA_005502385.1_00309 GCA_005502385.1_00309_gene,GCA_005502385.1_00309_mRNA GCA_005502385.1_00309 ATP-dependent Clp protease ATP-binding subunit ClpC GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MLFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQEHSGTLHYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGSPEMNTKNATANKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKNKRVMSLDMGTVVAGTKYRGEFEERLKKVMDEIHHAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPIQVDEPSVEDTVAILKGLRDRYEAHHRINISDEALEAAAKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQSKLEKQYEDAKNEWKTSQGGQSTSLSKEDIAEVIAGWTGIPLTRINETESDRLLNLEETLHDRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGQDYETIRRTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTKRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPLIRSIQKTVEDNLSELILDGNQIEGKEVTIDHDGNEFKYDIHDKQENNIEDTKEPATEE persistent 823 clpC ATP-dependent Clp protease ATP-binding subunit ClpC GO:0005524,GO:0005737,GO:0016887,GO:0034605 COG0542,O WP_070517430.1 UPI0008A53C1F UniRef100_UPI0008A53C1F,UniRef50_Q2G0P5,UniRef90_Q2G0P5 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 50599 51609 . - . GCA_005502385.1_00310_gene GCA_005502385.1_00310 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MMNDMDAHISEWMKETDESPIVMSSRIRLARNLENHVHPLMFPSEQAGFRVINEVQDALPNLSLMRLDTMDQQSKMKLVAKHLISKELIKQPASAVLLNEDESLSIMINEEDHIRIQAMGNDLSLTDLYQKASEIDDILDEQLEISFDEDLGYLTTCPTNIGTGMRASVMLHLPGLSIMKRMNRIAQTINRFGFTIRGIYGEGSQVYGHIYQISNQLTLGKTEEDIIDQLTEVVQQIINEEMQIRERLTQYSELETLDRIYRSLGILQNSRMISMEEASYRLSEIKLGIDLGYLNLSNFKFNELMVSIQSAFLYNDEDENVSVNEKRANILRKHTN . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 50599 51609 . - . GCA_005502385.1_00310_mRNA GCA_005502385.1_00310 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MMNDMDAHISEWMKETDESPIVMSSRIRLARNLENHVHPLMFPSEQAGFRVINEVQDALPNLSLMRLDTMDQQSKMKLVAKHLISKELIKQPASAVLLNEDESLSIMINEEDHIRIQAMGNDLSLTDLYQKASEIDDILDEQLEISFDEDLGYLTTCPTNIGTGMRASVMLHLPGLSIMKRMNRIAQTINRFGFTIRGIYGEGSQVYGHIYQISNQLTLGKTEEDIIDQLTEVVQQIINEEMQIRERLTQYSELETLDRIYRSLGILQNSRMISMEEASYRLSEIKLGIDLGYLNLSNFKFNELMVSIQSAFLYNDEDENVSVNEKRANILRKHTN . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 50599 51609 . - 0 GCA_005502385.1_00310 GCA_005502385.1_00310_gene,GCA_005502385.1_00310_mRNA GCA_005502385.1_00310 Protein-arginine kinase GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MMNDMDAHISEWMKETDESPIVMSSRIRLARNLENHVHPLMFPSEQAGFRVINEVQDALPNLSLMRLDTMDQQSKMKLVAKHLISKELIKQPASAVLLNEDESLSIMINEEDHIRIQAMGNDLSLTDLYQKASEIDDILDEQLEISFDEDLGYLTTCPTNIGTGMRASVMLHLPGLSIMKRMNRIAQTINRFGFTIRGIYGEGSQVYGHIYQISNQLTLGKTEEDIIDQLTEVVQQIINEEMQIRERLTQYSELETLDRIYRSLGILQNSRMISMEEASYRLSEIKLGIDLGYLNLSNFKFNELMVSIQSAFLYNDEDENVSVNEKRANILRKHTN persistent 336 protein arginine kinase 2.7.14.1 WP_101804401.1 UPI0009C8CF81 UniRef100_UPI0006606029,UniRef50_Q2G0P6,UniRef90_A0A657LZY7 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 51599 52162 . - . GCA_005502385.1_00311_gene GCA_005502385.1_00311 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MLCENCHLNEAEVKLTVKSKDGTSEKWVCSECAQGEQPWNQQEHAASHSEFQDDIEEAFVVKQILQHLATKHGLNFHEVAFQEEKRCPTCNMTLKDIAHVGKFGCANCYAVFKEDIVDIVRRVQGGQFEHVGKMPRSSHHKLAIKKQIEEKTNYLNILIEKQKFEEAAVIRDEIKALKHESEMEHDE . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 51599 52162 . - . GCA_005502385.1_00311_mRNA GCA_005502385.1_00311 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MLCENCHLNEAEVKLTVKSKDGTSEKWVCSECAQGEQPWNQQEHAASHSEFQDDIEEAFVVKQILQHLATKHGLNFHEVAFQEEKRCPTCNMTLKDIAHVGKFGCANCYAVFKEDIVDIVRRVQGGQFEHVGKMPRSSHHKLAIKKQIEEKTNYLNILIEKQKFEEAAVIRDEIKALKHESEMEHDE . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 51599 52162 . - 0 GCA_005502385.1_00311 GCA_005502385.1_00311_gene,GCA_005502385.1_00311_mRNA GCA_005502385.1_00311 Protein-arginine kinase activator protein GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MLCENCHLNEAEVKLTVKSKDGTSEKWVCSECAQGEQPWNQQEHAASHSEFQDDIEEAFVVKQILQHLATKHGLNFHEVAFQEEKRCPTCNMTLKDIAHVGKFGCANCYAVFKEDIVDIVRRVQGGQFEHVGKMPRSSHHKLAIKKQIEEKTNYLNILIEKQKFEEAAVIRDEIKALKHESEMEHDE persistent 187 UvrB/UvrC motif-containing protein WP_017175301.1 UPI0002E791B5 UniRef100_A0A4Q9WQX4,UniRef50_Q2G0P7,UniRef90_A0A4Q9WQX4 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 52194 52655 . - . GCA_005502385.1_00312_gene GCA_005502385.1_00312 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MHNMSDIIEQYIKQLFEESNEDMVEIQRANIAQRFDCVPSQLNYVIKTRFTNEHGYEIESKRGGGGYIRITKIENKDATGYINHLLQLIGPSISQQQAYYIIDGLLDKGLISDREARMIQVIIDRETLSMDVVSRDIIRANILKRLLPIINYY . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 52194 52655 . - . GCA_005502385.1_00312_mRNA GCA_005502385.1_00312 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MHNMSDIIEQYIKQLFEESNEDMVEIQRANIAQRFDCVPSQLNYVIKTRFTNEHGYEIESKRGGGGYIRITKIENKDATGYINHLLQLIGPSISQQQAYYIIDGLLDKGLISDREARMIQVIIDRETLSMDVVSRDIIRANILKRLLPIINYY . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 52194 52655 . - 0 GCA_005502385.1_00312 GCA_005502385.1_00312_gene,GCA_005502385.1_00312_mRNA GCA_005502385.1_00312 Transcriptional regulator CtsR GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MHNMSDIIEQYIKQLFEESNEDMVEIQRANIAQRFDCVPSQLNYVIKTRFTNEHGYEIESKRGGGGYIRITKIENKDATGYINHLLQLIGPSISQQQAYYIIDGLLDKGLISDREARMIQVIIDRETLSMDVVSRDIIRANILKRLLPIINYY persistent 153 ctsR Transcriptional regulator CtsR GO:0003677,GO:0006355 COG4463,K WP_002449017.1 UPI00019FCE74 UniRef100_A0A1L8Y4U1,UniRef50_Q2G0P8,UniRef90_Q2G0P8 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 52809 54023 . + . GCA_005502385.1_00313_gene GCA_005502385.1_00313 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MHILIGIIGIIVFLALAFLFSSDKKNVRWHYVGLLLIIQLIFAFILLKTTAGITIIGGISNGFNYLLQKAAEGVNFVFGGFKFVDPKNPPFFFSVLLPIVFISALIGILQYTRILPWIINVLGFLISKINGMGRLESYNAVAAAILGQSEVFISLKQQLPYIPKQRLYTLTASAMSTVSASIIGAYFTLIEPKYVVTAVVLNLFGGFIIASIINPYTVNEEDDKLLVDESETKKQSFFEMLGEYILDGFKVAVIVGAMLIGYIAIIALLNGLVSGIFSLISGGAIKWDFQTLIGFVFAPFAFLAGVPWQDAVKSGSVMATKLLSNEFVAMQSLGSLKGISEHAKGITSVFLVSFANFSSIGIISGAIKSLNSEKGDVVARFGIKLLFGATLVSFISAAIAGFFI . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 52809 54023 . + . GCA_005502385.1_00313_mRNA GCA_005502385.1_00313 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MHILIGIIGIIVFLALAFLFSSDKKNVRWHYVGLLLIIQLIFAFILLKTTAGITIIGGISNGFNYLLQKAAEGVNFVFGGFKFVDPKNPPFFFSVLLPIVFISALIGILQYTRILPWIINVLGFLISKINGMGRLESYNAVAAAILGQSEVFISLKQQLPYIPKQRLYTLTASAMSTVSASIIGAYFTLIEPKYVVTAVVLNLFGGFIIASIINPYTVNEEDDKLLVDESETKKQSFFEMLGEYILDGFKVAVIVGAMLIGYIAIIALLNGLVSGIFSLISGGAIKWDFQTLIGFVFAPFAFLAGVPWQDAVKSGSVMATKLLSNEFVAMQSLGSLKGISEHAKGITSVFLVSFANFSSIGIISGAIKSLNSEKGDVVARFGIKLLFGATLVSFISAAIAGFFI . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 52809 54023 . + 0 GCA_005502385.1_00313 GCA_005502385.1_00313_gene,GCA_005502385.1_00313_mRNA GCA_005502385.1_00313 Nucleoside permease NupC GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MHILIGIIGIIVFLALAFLFSSDKKNVRWHYVGLLLIIQLIFAFILLKTTAGITIIGGISNGFNYLLQKAAEGVNFVFGGFKFVDPKNPPFFFSVLLPIVFISALIGILQYTRILPWIINVLGFLISKINGMGRLESYNAVAAAILGQSEVFISLKQQLPYIPKQRLYTLTASAMSTVSASIIGAYFTLIEPKYVVTAVVLNLFGGFIIASIINPYTVNEEDDKLLVDESETKKQSFFEMLGEYILDGFKVAVIVGAMLIGYIAIIALLNGLVSGIFSLISGGAIKWDFQTLIGFVFAPFAFLAGVPWQDAVKSGSVMATKLLSNEFVAMQSLGSLKGISEHAKGITSVFLVSFANFSSIGIISGAIKSLNSEKGDVVARFGIKLLFGATLVSFISAAIAGFFI persistent 404 Nucleoside permease WP_017175300.1 UPI0002FC18C5 UniRef100_A0A3S7GY58,UniRef50_P0AFF2,UniRef90_A0A3S7GY58 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 54061 54615 . - . GCA_005502385.1_00314_gene GCA_005502385.1_00314 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MKIGVLALQGAVREHIRHIELSGHEGIAVKKVEQLDEIDGLILPGGESTTLRRLMDLYGFKEKLQQSDLPMFGTCAGLIVLAKDVEGETGYLKKLDITVARNSFGRQVDSFEAELDVKGIAKDIEGVFIRAPHIVSVENNVEILSSISDKIVAVKQGKYLGVSFHPELTDDYRITQYFIEHIVK . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 54061 54615 . - . GCA_005502385.1_00314_mRNA GCA_005502385.1_00314 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MKIGVLALQGAVREHIRHIELSGHEGIAVKKVEQLDEIDGLILPGGESTTLRRLMDLYGFKEKLQQSDLPMFGTCAGLIVLAKDVEGETGYLKKLDITVARNSFGRQVDSFEAELDVKGIAKDIEGVFIRAPHIVSVENNVEILSSISDKIVAVKQGKYLGVSFHPELTDDYRITQYFIEHIVK . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 54061 54615 . - 0 GCA_005502385.1_00314 GCA_005502385.1_00314_gene,GCA_005502385.1_00314_mRNA GCA_005502385.1_00314 Pyridoxal 5'-phosphate synthase subunit PdxT GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MKIGVLALQGAVREHIRHIELSGHEGIAVKKVEQLDEIDGLILPGGESTTLRRLMDLYGFKEKLQQSDLPMFGTCAGLIVLAKDVEGETGYLKKLDITVARNSFGRQVDSFEAELDVKGIAKDIEGVFIRAPHIVSVENNVEILSSISDKIVAVKQGKYLGVSFHPELTDDYRITQYFIEHIVK persistent 184 pdxT pyridoxal 5'-phosphate synthase glutaminase subunit PdxT 3.5.1.2,4.3.3.6 GO:0004359,GO:0005829,GO:0006543,GO:0008614,GO:0016884,GO:0036381,GO:0042823,GO:1903600 COG0311,H WP_017175299.1 UPI000305FA4A UniRef100_A0A4Q9WMA3,UniRef50_Q2G0Q0,UniRef90_Q4L3H9 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 54619 55506 . - . GCA_005502385.1_00315_gene GCA_005502385.1_00315 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSKIVGSERVKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVMALERVPSDIRAAGGVARSANPKIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADEEFHLRKDQFTVPFVCGCRNLSEAARRVGEGAAMLRTKGEPGTGNIVEAVRHMRKVNSEVSRLTVMNDDEIMTYAKELGAPYNVLKQIKEEGRLPVVNFAAGGVATPQDAALMMELGADGVFVGSGIFKSEAPEKFAKAIVQATTHYQDYELIGKLAAELGTAMKGLDINKISLEERMQERGW . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 54619 55506 . - . GCA_005502385.1_00315_mRNA GCA_005502385.1_00315 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSKIVGSERVKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVMALERVPSDIRAAGGVARSANPKIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADEEFHLRKDQFTVPFVCGCRNLSEAARRVGEGAAMLRTKGEPGTGNIVEAVRHMRKVNSEVSRLTVMNDDEIMTYAKELGAPYNVLKQIKEEGRLPVVNFAAGGVATPQDAALMMELGADGVFVGSGIFKSEAPEKFAKAIVQATTHYQDYELIGKLAAELGTAMKGLDINKISLEERMQERGW . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 54619 55506 . - 0 GCA_005502385.1_00315 GCA_005502385.1_00315_gene,GCA_005502385.1_00315_mRNA GCA_005502385.1_00315 Pyridoxal 5'-phosphate synthase subunit PdxS GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MSKIVGSERVKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVMALERVPSDIRAAGGVARSANPKIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADEEFHLRKDQFTVPFVCGCRNLSEAARRVGEGAAMLRTKGEPGTGNIVEAVRHMRKVNSEVSRLTVMNDDEIMTYAKELGAPYNVLKQIKEEGRLPVVNFAAGGVATPQDAALMMELGADGVFVGSGIFKSEAPEKFAKAIVQATTHYQDYELIGKLAAELGTAMKGLDINKISLEERMQERGW persistent 295 pdxS pyridoxal 5'-phosphate synthase subunit PdxS 4.3.3.6 GO:0003824,GO:0006520,GO:0008615,GO:0036381,GO:0042823 COG0214,H WP_137689751.1 UPI0010F82B6C UniRef100_UPI0010F82B6C,UniRef50_O59905,UniRef90_B9DKX7 . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka gene 55602 56972 . + . GCA_005502385.1_00316_gene GCA_005502385.1_00316 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MTKKKSLYISLYEKLKKQIIEGVYESNDKFPSKRQLSQHLSLSHTTIEHAYQLLLDEGFIYSKPRSGYYVSEIQSLPVTNSYPEISDILETDKTTQKNTYQYQFNLAEIDAEHFPNHLFKRYAKEVFEEEQLALLSKGSVQGEFNLRQQISHYLFNSRGVSCHPDQIIIGSSTEQLLNMVTDLLKDSSFIIEQPSYPPIKHVLDKHRISYTQARVEKDGINIDEVFQKNNDILYITPSHQFPTGYVMSLKKRTQLIKWAQQKKERYIIEDDYDSEFRYFGKPIPALQNLDKKQKVIYISTFSKSLYPSCRMAYIVLPNKLLKLFREMKYVESNTVPVHLQHMVAQFMATGSFERHLNKMRRIYKNKLTFILEKLTPYKGQLKIEGALTGMHFTLVVKNNLTLNECIKRTKKCNLKLTPYPYSNKKAQPPTFLIGFGGIPEEKLEKHVNALIKALTV . . . . . . . GCA_005502385.1|SCOV01000013.1 prokka mRNA 55602 56972 . + . GCA_005502385.1_00316_mRNA GCA_005502385.1_00316 GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MTKKKSLYISLYEKLKKQIIEGVYESNDKFPSKRQLSQHLSLSHTTIEHAYQLLLDEGFIYSKPRSGYYVSEIQSLPVTNSYPEISDILETDKTTQKNTYQYQFNLAEIDAEHFPNHLFKRYAKEVFEEEQLALLSKGSVQGEFNLRQQISHYLFNSRGVSCHPDQIIIGSSTEQLLNMVTDLLKDSSFIIEQPSYPPIKHVLDKHRISYTQARVEKDGINIDEVFQKNNDILYITPSHQFPTGYVMSLKKRTQLIKWAQQKKERYIIEDDYDSEFRYFGKPIPALQNLDKKQKVIYISTFSKSLYPSCRMAYIVLPNKLLKLFREMKYVESNTVPVHLQHMVAQFMATGSFERHLNKMRRIYKNKLTFILEKLTPYKGQLKIEGALTGMHFTLVVKNNLTLNECIKRTKKCNLKLTPYPYSNKKAQPPTFLIGFGGIPEEKLEKHVNALIKALTV . . . . . . . GCA_005502385.1|SCOV01000013.1 Prodigal:002006 CDS 55602 56972 . + 0 GCA_005502385.1_00316 GCA_005502385.1_00316_gene,GCA_005502385.1_00316_mRNA GCA_005502385.1_00316 HTH-type transcriptional regulatory protein GabR GCA_005502385.1 SCOV01000013.1 GCA_005502385.1|SCOV01000013.1 GCA_005502385.1_SCOV01000013.1 MTKKKSLYISLYEKLKKQIIEGVYESNDKFPSKRQLSQHLSLSHTTIEHAYQLLLDEGFIYSKPRSGYYVSEIQSLPVTNSYPEISDILETDKTTQKNTYQYQFNLAEIDAEHFPNHLFKRYAKEVFEEEQLALLSKGSVQGEFNLRQQISHYLFNSRGVSCHPDQIIIGSSTEQLLNMVTDLLKDSSFIIEQPSYPPIKHVLDKHRISYTQARVEKDGINIDEVFQKNNDILYITPSHQFPTGYVMSLKKRTQLIKWAQQKKERYIIEDDYDSEFRYFGKPIPALQNLDKKQKVIYISTFSKSLYPSCRMAYIVLPNKLLKLFREMKYVESNTVPVHLQHMVAQFMATGSFERHLNKMRRIYKNKLTFILEKLTPYKGQLKIEGALTGMHFTLVVKNNLTLNECIKRTKKCNLKLTPYPYSNKKAQPPTFLIGFGGIPEEKLEKHVNALIKALTV persistent 456 gntR GntR family transcriptional regulator WP_019835672.1 UPI00035EC543 UniRef100_UPI00035EC543,UniRef50_Q2G0Q2,UniRef90_A0A3S7GUL6 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 335 409 . + . GCA_005502385.1_00317_gene GCA_005502385.1_00317 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 335 409 . + . GCA_005502385.1_00317_mRNA GCA_005502385.1_00317 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 . . . . . . . GCA_005502385.1|SCOV01000014.1 Aragorn:001002 tRNA 335 409 . + . GCA_005502385.1_00317 GCA_005502385.1_00317_gene,GCA_005502385.1_00317_mRNA GCA_005502385.1_00317 tRNA-Glu(ttc) GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 415 487 . + . GCA_005502385.1_00318_gene GCA_005502385.1_00318 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 415 487 . + . GCA_005502385.1_00318_mRNA GCA_005502385.1_00318 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 . . . . . . . GCA_005502385.1|SCOV01000014.1 Aragorn:001002 tRNA 415 487 . + . GCA_005502385.1_00318 GCA_005502385.1_00318_gene,GCA_005502385.1_00318_mRNA GCA_005502385.1_00318 tRNA-Asp(gtc) GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 976 1677 . + . GCA_005502385.1_00319_gene GCA_005502385.1_00319 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MARKVVVVDDEKPIADILEFNLKKEGYEVHCAYDGNDAVDLIYEEEPDIVLLDIMLPGRDGMEVCREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELIARVKANLRRHYSQPAQESEGTTNEIAIKDIVVYPDAYSIKKRGEDIELTHREFELFHYLSKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGYFLQQHD . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 976 1677 . + . GCA_005502385.1_00319_mRNA GCA_005502385.1_00319 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MARKVVVVDDEKPIADILEFNLKKEGYEVHCAYDGNDAVDLIYEEEPDIVLLDIMLPGRDGMEVCREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELIARVKANLRRHYSQPAQESEGTTNEIAIKDIVVYPDAYSIKKRGEDIELTHREFELFHYLSKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGYFLQQHD . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 976 1677 . + 0 GCA_005502385.1_00319 GCA_005502385.1_00319_gene,GCA_005502385.1_00319_mRNA GCA_005502385.1_00319 Transcriptional regulatory protein WalR GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MARKVVVVDDEKPIADILEFNLKKEGYEVHCAYDGNDAVDLIYEEEPDIVLLDIMLPGRDGMEVCREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELIARVKANLRRHYSQPAQESEGTTNEIAIKDIVVYPDAYSIKKRGEDIELTHREFELFHYLSKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGYFLQQHD persistent 233 yycF response regulator YycF GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993 COG0745,TK WP_048787705.1 UPI000660B1C3 UniRef100_UPI00124DD560,UniRef50_P37478,UniRef90_Q2G2U6 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 1690 3516 . + . GCA_005502385.1_00320_gene GCA_005502385.1_00320 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKWLKQLQSLHTKLVIVYVLLIIIGMQIIGLYFTNSLEKELTNNFMKNIKQYATQLEVNIERIYKDNPSNAQKEVQSLLNEYANRQEIEEIRFIDKDQIIMATAKLSSHSLINQKVNDNSVQKAISLGEANSHNVLKDYGHGKERIWIYNLPVKNSNDVIGNIYIESNINDVYNQLNNINQIFIIGTAISLFITVILGFFIARTITRPITDMRNQTVEMSKGNYTQRVKIYGNDEIGELALAFNNLSKRVQEAQANTESEKRRLDSVITHMSDGIIATDRRGRIRIVNDMAIKMLGMAKEDLIGYYMLNVLKIEGDFSLEEIQENNDSILIDMNEEEGIIARVNFSTIVQDTGFVNGYIAVLHDVTEQQQVERERREFVANVSHELRTPLTSMNSYIEALEEGAWKDENLAPSFLSVTREETVRMIRLVNDLLQLSKMDNETEQITKEIVDFNMFINKIINRHEMAAKDTTFVREIPNETIFTEIDPDKMTQVFDNVITNAMKYSRGDKRVEFHVKQNALYNRMTIRIKDNGIGIPINKVDKIFDRFYRVDKARTRKMGGTGLGLAISKEIVEAHNGRIWANSVEGQGTSIFITLPCEVIDDGDWDEQ . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 1690 3516 . + . GCA_005502385.1_00320_mRNA GCA_005502385.1_00320 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKWLKQLQSLHTKLVIVYVLLIIIGMQIIGLYFTNSLEKELTNNFMKNIKQYATQLEVNIERIYKDNPSNAQKEVQSLLNEYANRQEIEEIRFIDKDQIIMATAKLSSHSLINQKVNDNSVQKAISLGEANSHNVLKDYGHGKERIWIYNLPVKNSNDVIGNIYIESNINDVYNQLNNINQIFIIGTAISLFITVILGFFIARTITRPITDMRNQTVEMSKGNYTQRVKIYGNDEIGELALAFNNLSKRVQEAQANTESEKRRLDSVITHMSDGIIATDRRGRIRIVNDMAIKMLGMAKEDLIGYYMLNVLKIEGDFSLEEIQENNDSILIDMNEEEGIIARVNFSTIVQDTGFVNGYIAVLHDVTEQQQVERERREFVANVSHELRTPLTSMNSYIEALEEGAWKDENLAPSFLSVTREETVRMIRLVNDLLQLSKMDNETEQITKEIVDFNMFINKIINRHEMAAKDTTFVREIPNETIFTEIDPDKMTQVFDNVITNAMKYSRGDKRVEFHVKQNALYNRMTIRIKDNGIGIPINKVDKIFDRFYRVDKARTRKMGGTGLGLAISKEIVEAHNGRIWANSVEGQGTSIFITLPCEVIDDGDWDEQ . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 1690 3516 . + 0 GCA_005502385.1_00320 GCA_005502385.1_00320_gene,GCA_005502385.1_00320_mRNA GCA_005502385.1_00320 Sensor protein kinase WalK GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKWLKQLQSLHTKLVIVYVLLIIIGMQIIGLYFTNSLEKELTNNFMKNIKQYATQLEVNIERIYKDNPSNAQKEVQSLLNEYANRQEIEEIRFIDKDQIIMATAKLSSHSLINQKVNDNSVQKAISLGEANSHNVLKDYGHGKERIWIYNLPVKNSNDVIGNIYIESNINDVYNQLNNINQIFIIGTAISLFITVILGFFIARTITRPITDMRNQTVEMSKGNYTQRVKIYGNDEIGELALAFNNLSKRVQEAQANTESEKRRLDSVITHMSDGIIATDRRGRIRIVNDMAIKMLGMAKEDLIGYYMLNVLKIEGDFSLEEIQENNDSILIDMNEEEGIIARVNFSTIVQDTGFVNGYIAVLHDVTEQQQVERERREFVANVSHELRTPLTSMNSYIEALEEGAWKDENLAPSFLSVTREETVRMIRLVNDLLQLSKMDNETEQITKEIVDFNMFINKIINRHEMAAKDTTFVREIPNETIFTEIDPDKMTQVFDNVITNAMKYSRGDKRVEFHVKQNALYNRMTIRIKDNGIGIPINKVDKIFDRFYRVDKARTRKMGGTGLGLAISKEIVEAHNGRIWANSVEGQGTSIFITLPCEVIDDGDWDEQ persistent 608 walK cell wall metabolism sensor histidine kinase WalK 2.7.13.3 GO:0000155,GO:0000156,GO:0005524,GO:0005886,GO:0006355,GO:0007165,GO:0007234,GO:0016020,GO:0016310,GO:0030295 COG5002,T WP_048679004.1 UPI00066152FE UniRef100_UPI00066152FE,UniRef50_Q2G2U4,UniRef90_Q4LAJ8 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 3506 4837 . + . GCA_005502385.1_00321_gene GCA_005502385.1_00321 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNSKEHIKSVILFLLVMMSIVLTYMIWNFTPDLNNLDSADSKKNNTKTIGKPLAAKMDTVISPYQVVSVKGDKVKGLTPSRSQLAQVIDPLKDHEVSKVELMQKGYNLQTPILDHDFVVLDFTYDMPLTTYLGQVLNNSAKIPKHFSFNRILIDKNPKGDLELYALSKRHQQVMKVTIDAKATPFTKTIHHLEKDMETYSEVITNKTTIDKSTHIFAPKHPKDLRSYRMVYDTISVETMNSILFDDSVIIRSGKSGSTTYNNNTGVANYNDDSKKYHYKNLSEDESGSKDMDTSIPSTFEYINNHGGFFNDDFRLFNTDNMSGELTYQLFLNGHPTFNDQQLNEINVTWGEKGIYDYKRALLRSSVPLEGATTSLDSLETVRASLANNHNIDFEKISNMIVGYKEDDQPDKDDIEVQRNSEFIPTWYVEYDGEWYVYQDGRLE . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 3506 4837 . + . GCA_005502385.1_00321_mRNA GCA_005502385.1_00321 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNSKEHIKSVILFLLVMMSIVLTYMIWNFTPDLNNLDSADSKKNNTKTIGKPLAAKMDTVISPYQVVSVKGDKVKGLTPSRSQLAQVIDPLKDHEVSKVELMQKGYNLQTPILDHDFVVLDFTYDMPLTTYLGQVLNNSAKIPKHFSFNRILIDKNPKGDLELYALSKRHQQVMKVTIDAKATPFTKTIHHLEKDMETYSEVITNKTTIDKSTHIFAPKHPKDLRSYRMVYDTISVETMNSILFDDSVIIRSGKSGSTTYNNNTGVANYNDDSKKYHYKNLSEDESGSKDMDTSIPSTFEYINNHGGFFNDDFRLFNTDNMSGELTYQLFLNGHPTFNDQQLNEINVTWGEKGIYDYKRALLRSSVPLEGATTSLDSLETVRASLANNHNIDFEKISNMIVGYKEDDQPDKDDIEVQRNSEFIPTWYVEYDGEWYVYQDGRLE . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 3506 4837 . + 0 GCA_005502385.1_00321 GCA_005502385.1_00321_gene,GCA_005502385.1_00321_mRNA GCA_005502385.1_00321 Two-component system WalR/WalK regulatory protein YycH GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNSKEHIKSVILFLLVMMSIVLTYMIWNFTPDLNNLDSADSKKNNTKTIGKPLAAKMDTVISPYQVVSVKGDKVKGLTPSRSQLAQVIDPLKDHEVSKVELMQKGYNLQTPILDHDFVVLDFTYDMPLTTYLGQVLNNSAKIPKHFSFNRILIDKNPKGDLELYALSKRHQQVMKVTIDAKATPFTKTIHHLEKDMETYSEVITNKTTIDKSTHIFAPKHPKDLRSYRMVYDTISVETMNSILFDDSVIIRSGKSGSTTYNNNTGVANYNDDSKKYHYKNLSEDESGSKDMDTSIPSTFEYINNHGGFFNDDFRLFNTDNMSGELTYQLFLNGHPTFNDQQLNEINVTWGEKGIYDYKRALLRSSVPLEGATTSLDSLETVRASLANNHNIDFEKISNMIVGYKEDDQPDKDDIEVQRNSEFIPTWYVEYDGEWYVYQDGRLE persistent 443 yycH Regulatory protein YycH domain-containing protein WP_054105632.1 UPI0006B8BACE UniRef100_UPI0006B8BACE,UniRef50_A0A654CPY7,UniRef90_A0A6N0I4S4 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 4838 5629 . + . GCA_005502385.1_00322_gene GCA_005502385.1_00322 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNWKLTKTLFIFVFVLVNIFLILIYINKVTKSQINETESDNEVNFQQEEIKVSTDVLNKDVSGTKMQMITATSKNFKSYAENKSSLETSDSGFTVSGDVDNTVNVSDRNLSDLKDYIINHIYNGKVYQLGDINSNAVTYEQTYDGYPLLNNNKARLRFNIDDGKATMYKQTLMSKIEPAKGDNNPKKQVITPRKAIESLYFNRYLKAGDEVLDARLGYYSVVRETNVQLLQANWEIKVKHKGKEETKKYYVEATSVNPKVIDN . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 4838 5629 . + . GCA_005502385.1_00322_mRNA GCA_005502385.1_00322 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNWKLTKTLFIFVFVLVNIFLILIYINKVTKSQINETESDNEVNFQQEEIKVSTDVLNKDVSGTKMQMITATSKNFKSYAENKSSLETSDSGFTVSGDVDNTVNVSDRNLSDLKDYIINHIYNGKVYQLGDINSNAVTYEQTYDGYPLLNNNKARLRFNIDDGKATMYKQTLMSKIEPAKGDNNPKKQVITPRKAIESLYFNRYLKAGDEVLDARLGYYSVVRETNVQLLQANWEIKVKHKGKEETKKYYVEATSVNPKVIDN . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 4838 5629 . + 0 GCA_005502385.1_00322 GCA_005502385.1_00322_gene,GCA_005502385.1_00322_mRNA GCA_005502385.1_00322 hypothetical protein GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNWKLTKTLFIFVFVLVNIFLILIYINKVTKSQINETESDNEVNFQQEEIKVSTDVLNKDVSGTKMQMITATSKNFKSYAENKSSLETSDSGFTVSGDVDNTVNVSDRNLSDLKDYIINHIYNGKVYQLGDINSNAVTYEQTYDGYPLLNNNKARLRFNIDDGKATMYKQTLMSKIEPAKGDNNPKKQVITPRKAIESLYFNRYLKAGDEVLDARLGYYSVVRETNVQLLQANWEIKVKHKGKEETKKYYVEATSVNPKVIDN persistent 263 Regulatory protein YycH-like domain-containing protein WP_017175611.1 UPI0002E07698 UniRef100_A0A6N0I334,UniRef50_Q2G2U2,UniRef90_A0AAE5MY62 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 5895 6686 . + . GCA_005502385.1_00323_gene GCA_005502385.1_00323 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MIRMSVLASGSTGNATYVESEKGSLLVDVGLTGKKMEDLFSQIDRDMKNLNGILVTHEHSDHIKGLGVIARRYGLPVYANEKTWKAIEKKDDKIPMDQKFIFNPYETKSIAGFDIESFNVSHDAIDPQFYIFHNNYKKFTMITDTGYVSDRMKGMIQGSDAFMFESNHDVDMLRMCRYPWKTKQRILSDMGHVSNEDAGHAMADVITGNTKRIYLSHLSRDNNMKDLARMSVGQVLNERDIDTEKEVLLCDTDKAQATPIYTL . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 5895 6686 . + . GCA_005502385.1_00323_mRNA GCA_005502385.1_00323 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MIRMSVLASGSTGNATYVESEKGSLLVDVGLTGKKMEDLFSQIDRDMKNLNGILVTHEHSDHIKGLGVIARRYGLPVYANEKTWKAIEKKDDKIPMDQKFIFNPYETKSIAGFDIESFNVSHDAIDPQFYIFHNNYKKFTMITDTGYVSDRMKGMIQGSDAFMFESNHDVDMLRMCRYPWKTKQRILSDMGHVSNEDAGHAMADVITGNTKRIYLSHLSRDNNMKDLARMSVGQVLNERDIDTEKEVLLCDTDKAQATPIYTL . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 5895 6686 . + 0 GCA_005502385.1_00323 GCA_005502385.1_00323_gene,GCA_005502385.1_00323_mRNA GCA_005502385.1_00323 Putative metallo-hydrolase YycJ GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MIRMSVLASGSTGNATYVESEKGSLLVDVGLTGKKMEDLFSQIDRDMKNLNGILVTHEHSDHIKGLGVIARRYGLPVYANEKTWKAIEKKDDKIPMDQKFIFNPYETKSIAGFDIESFNVSHDAIDPQFYIFHNNYKKFTMITDTGYVSDRMKGMIQGSDAFMFESNHDVDMLRMCRYPWKTKQRILSDMGHVSNEDAGHAMADVITGNTKRIYLSHLSRDNNMKDLARMSVGQVLNERDIDTEKEVLLCDTDKAQATPIYTL persistent 263 MBL fold metallo-hydrolase UniRef50_A0A4Y1WBN6,UniRef90_A0AAE5MY63 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 7107 7586 . + . GCA_005502385.1_00324_gene GCA_005502385.1_00324 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKITILAVGKLKEKYWKQAIAEYEKRLGAYSKIEMIEVPDEKAPENMSDKEIEQVKEKEGQRLLAKIKPQATVITLEIQGKMLSSEGLAKELQQRMTQGQSDFVFVIGGSNGLHQDVLNRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAYHK . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 7107 7586 . + . GCA_005502385.1_00324_mRNA GCA_005502385.1_00324 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKITILAVGKLKEKYWKQAIAEYEKRLGAYSKIEMIEVPDEKAPENMSDKEIEQVKEKEGQRLLAKIKPQATVITLEIQGKMLSSEGLAKELQQRMTQGQSDFVFVIGGSNGLHQDVLNRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAYHK . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 7107 7586 . + 0 GCA_005502385.1_00324 GCA_005502385.1_00324_gene,GCA_005502385.1_00324_mRNA GCA_005502385.1_00324 Ribosomal RNA large subunit methyltransferase H GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKITILAVGKLKEKYWKQAIAEYEKRLGAYSKIEMIEVPDEKAPENMSDKEIEQVKEKEGQRLLAKIKPQATVITLEIQGKMLSSEGLAKELQQRMTQGQSDFVFVIGGSNGLHQDVLNRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAYHK persistent 159 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 2.1.1.177 GO:0005737,GO:0006364,GO:0008168,GO:0070038 COG1576,J WP_017175609.1 UPI0002F4AC02 UniRef100_A0A3S7GYK8,UniRef50_Q8DRQ7,UniRef90_Q5HK23 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 7754 8065 . + . GCA_005502385.1_00325_gene GCA_005502385.1_00325 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKKIIKYATTETVEEFLANFDTYVKYIKENDEAGLETIFNKETILDGNIEFDYQPLITEGIYSDTDPKNVEILHRSLHMLSPVQTSQEKFWLGMTMTYYKDYL . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 7754 8065 . + . GCA_005502385.1_00325_mRNA GCA_005502385.1_00325 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKKIIKYATTETVEEFLANFDTYVKYIKENDEAGLETIFNKETILDGNIEFDYQPLITEGIYSDTDPKNVEILHRSLHMLSPVQTSQEKFWLGMTMTYYKDYL . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 7754 8065 . + 0 GCA_005502385.1_00325 GCA_005502385.1_00325_gene,GCA_005502385.1_00325_mRNA GCA_005502385.1_00325 hypothetical protein GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKKIIKYATTETVEEFLANFDTYVKYIKENDEAGLETIFNKETILDGNIEFDYQPLITEGIYSDTDPKNVEILHRSLHMLSPVQTSQEKFWLGMTMTYYKDYL cloud 103 DUF6339 domain-containing protein UniRef50_A0A2T4PXB7,UniRef90_A0A2T4PXB7 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 8606 11854 . + . GCA_005502385.1_00326_gene GCA_005502385.1_00326 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKQYVVDNKGENTLVNLLKENVYKGAKLTVASATFSLFAYYAIKEELDKLSEFKFLFTKPAFYKLGQEVKRQYKLQLQEIENNPKFDGNNFEIQLRNKMISTRTANQVTKWINEKATFKTLVDDYSISKQLLVHNNKVNLFSQSDIDFTADGLGLTSSNRLGSYFVLAGVDELVENSLVEFDAIWNDETKVKDVTENVLEQIKLIYKENSPEWLYFVTLYNIFSDELDNLSEDNVIKEGTNFKETVVWNKLFEFQKDGVLGIIDKIERFNGCILADSVGLGKTFSALAVIKYYELRNDRVLVLAPKKLRDNWLTYKQNDKKNILVDDRFRYDVLNHTDLSRDSGYTGDINLESINWSNYDLVVIDESHNFRNNNAVKNKLTRYQKLMQEVIKKGVKTKVLLLSATPVNNKMNDIKNQIAFITEEDDTALLNEGVDSINIALKNAQTSFNRWSELPSEERTTTNFLNMVNPEYFQILDTLSIARSRKHIEKYYDVNDIGSFPNRLKPISIKTDVDINNEFRGMAKVNELMSSMEFSIYQPMKYVLPNKRKYYEDLYDTTVKEGSGRFKQTDREFAVASLMKVNIFKRLESSIYSFNKTIEKIIYKMNETINILEDSHNKNFSNDYSETTEIEDDELEVITVGSNKVRIKVEDIDHIKWIGDLKRDLTLLTDLYNETKNIDVSRDEKLKVLSEHIKKKIEKPINDSNKKIIIFSAFADTIHYLYNNLNEKLLENNIHSAMVTGSGDNKTTLNGVKSKDLVDVLTNFSPISKDRALTNPEAAEEIDILFATDCISEGQNLQDCDYLINYDIHWNPVRVIQRFGRIDRIGSRNKDIQLVNFWPNMELDEYINLEERVKGRMKLLNTSATGEEDVFDVSGKEMNDIEYRRNQLKALQDEGINLEDVSGAISITDLTYTDFKSDLSHAIKAYKKDLEKAPKGMYSIVSNNVLKEAEPGVIFCFKQNAPIDMSNNSLEPYILLYLKDNGDSLLHYTNAKTILDFYRRLALGQDEPFAELVDQFNKETDNGEDMSVYTDLLKKSLDVVRNKQEESVFDSFFTPGGTDIQQSLNLDFNDIELISFLIIKGD . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 8606 11854 . + . GCA_005502385.1_00326_mRNA GCA_005502385.1_00326 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKQYVVDNKGENTLVNLLKENVYKGAKLTVASATFSLFAYYAIKEELDKLSEFKFLFTKPAFYKLGQEVKRQYKLQLQEIENNPKFDGNNFEIQLRNKMISTRTANQVTKWINEKATFKTLVDDYSISKQLLVHNNKVNLFSQSDIDFTADGLGLTSSNRLGSYFVLAGVDELVENSLVEFDAIWNDETKVKDVTENVLEQIKLIYKENSPEWLYFVTLYNIFSDELDNLSEDNVIKEGTNFKETVVWNKLFEFQKDGVLGIIDKIERFNGCILADSVGLGKTFSALAVIKYYELRNDRVLVLAPKKLRDNWLTYKQNDKKNILVDDRFRYDVLNHTDLSRDSGYTGDINLESINWSNYDLVVIDESHNFRNNNAVKNKLTRYQKLMQEVIKKGVKTKVLLLSATPVNNKMNDIKNQIAFITEEDDTALLNEGVDSINIALKNAQTSFNRWSELPSEERTTTNFLNMVNPEYFQILDTLSIARSRKHIEKYYDVNDIGSFPNRLKPISIKTDVDINNEFRGMAKVNELMSSMEFSIYQPMKYVLPNKRKYYEDLYDTTVKEGSGRFKQTDREFAVASLMKVNIFKRLESSIYSFNKTIEKIIYKMNETINILEDSHNKNFSNDYSETTEIEDDELEVITVGSNKVRIKVEDIDHIKWIGDLKRDLTLLTDLYNETKNIDVSRDEKLKVLSEHIKKKIEKPINDSNKKIIIFSAFADTIHYLYNNLNEKLLENNIHSAMVTGSGDNKTTLNGVKSKDLVDVLTNFSPISKDRALTNPEAAEEIDILFATDCISEGQNLQDCDYLINYDIHWNPVRVIQRFGRIDRIGSRNKDIQLVNFWPNMELDEYINLEERVKGRMKLLNTSATGEEDVFDVSGKEMNDIEYRRNQLKALQDEGINLEDVSGAISITDLTYTDFKSDLSHAIKAYKKDLEKAPKGMYSIVSNNVLKEAEPGVIFCFKQNAPIDMSNNSLEPYILLYLKDNGDSLLHYTNAKTILDFYRRLALGQDEPFAELVDQFNKETDNGEDMSVYTDLLKKSLDVVRNKQEESVFDSFFTPGGTDIQQSLNLDFNDIELISFLIIKGD . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 8606 11854 . + 0 GCA_005502385.1_00326 GCA_005502385.1_00326_gene,GCA_005502385.1_00326_mRNA GCA_005502385.1_00326 RNA polymerase-associated protein RapA GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKQYVVDNKGENTLVNLLKENVYKGAKLTVASATFSLFAYYAIKEELDKLSEFKFLFTKPAFYKLGQEVKRQYKLQLQEIENNPKFDGNNFEIQLRNKMISTRTANQVTKWINEKATFKTLVDDYSISKQLLVHNNKVNLFSQSDIDFTADGLGLTSSNRLGSYFVLAGVDELVENSLVEFDAIWNDETKVKDVTENVLEQIKLIYKENSPEWLYFVTLYNIFSDELDNLSEDNVIKEGTNFKETVVWNKLFEFQKDGVLGIIDKIERFNGCILADSVGLGKTFSALAVIKYYELRNDRVLVLAPKKLRDNWLTYKQNDKKNILVDDRFRYDVLNHTDLSRDSGYTGDINLESINWSNYDLVVIDESHNFRNNNAVKNKLTRYQKLMQEVIKKGVKTKVLLLSATPVNNKMNDIKNQIAFITEEDDTALLNEGVDSINIALKNAQTSFNRWSELPSEERTTTNFLNMVNPEYFQILDTLSIARSRKHIEKYYDVNDIGSFPNRLKPISIKTDVDINNEFRGMAKVNELMSSMEFSIYQPMKYVLPNKRKYYEDLYDTTVKEGSGRFKQTDREFAVASLMKVNIFKRLESSIYSFNKTIEKIIYKMNETINILEDSHNKNFSNDYSETTEIEDDELEVITVGSNKVRIKVEDIDHIKWIGDLKRDLTLLTDLYNETKNIDVSRDEKLKVLSEHIKKKIEKPINDSNKKIIIFSAFADTIHYLYNNLNEKLLENNIHSAMVTGSGDNKTTLNGVKSKDLVDVLTNFSPISKDRALTNPEAAEEIDILFATDCISEGQNLQDCDYLINYDIHWNPVRVIQRFGRIDRIGSRNKDIQLVNFWPNMELDEYINLEERVKGRMKLLNTSATGEEDVFDVSGKEMNDIEYRRNQLKALQDEGINLEDVSGAISITDLTYTDFKSDLSHAIKAYKKDLEKAPKGMYSIVSNNVLKEAEPGVIFCFKQNAPIDMSNNSLEPYILLYLKDNGDSLLHYTNAKTILDFYRRLALGQDEPFAELVDQFNKETDNGEDMSVYTDLLKKSLDVVRNKQEESVFDSFFTPGGTDIQQSLNLDFNDIELISFLIIKGD cloud 1082 Helicase WP_070443520.1 UPI0008A28A0B UniRef100_UPI0008A28A0B,UniRef50_A0A837B095,UniRef90_A0A2T4PXB2 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 11857 12576 . + . GCA_005502385.1_00327_gene GCA_005502385.1_00327 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKEEEILTTLNLPKESWTLRTFPFNQLEKQLTLPQRKLFQERIVARGIRILATISERNTNILKYESETEKYEEIILFQIKVNQFNKVKDIYKTLASLMPYPLIILFNSEDSYKIVMSEHEKTDNGYLKVTNILETTETINLNAYLSSANLDALDKTSLRTFYLDMMAKFVAAESKEKYDASIEDNKVELLELVMKLDKEIQQLVNKAKKEPQLNRRIEYQFKANKLKEERAKYLTKEES . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 11857 12576 . + . GCA_005502385.1_00327_mRNA GCA_005502385.1_00327 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKEEEILTTLNLPKESWTLRTFPFNQLEKQLTLPQRKLFQERIVARGIRILATISERNTNILKYESETEKYEEIILFQIKVNQFNKVKDIYKTLASLMPYPLIILFNSEDSYKIVMSEHEKTDNGYLKVTNILETTETINLNAYLSSANLDALDKTSLRTFYLDMMAKFVAAESKEKYDASIEDNKVELLELVMKLDKEIQQLVNKAKKEPQLNRRIEYQFKANKLKEERAKYLTKEES . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 11857 12576 . + 0 GCA_005502385.1_00327 GCA_005502385.1_00327_gene,GCA_005502385.1_00327_mRNA GCA_005502385.1_00327 hypothetical protein GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKEEEILTTLNLPKESWTLRTFPFNQLEKQLTLPQRKLFQERIVARGIRILATISERNTNILKYESETEKYEEIILFQIKVNQFNKVKDIYKTLASLMPYPLIILFNSEDSYKIVMSEHEKTDNGYLKVTNILETTETINLNAYLSSANLDALDKTSLRTFYLDMMAKFVAAESKEKYDASIEDNKVELLELVMKLDKEIQQLVNKAKKEPQLNRRIEYQFKANKLKEERAKYLTKEES cloud 239 DUF4391 domain-containing protein UniRef50_A0A2T4PXH0,UniRef90_A0A2T4PXH0 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 12576 14528 . + . GCA_005502385.1_00328_gene GCA_005502385.1_00328 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNKVPSSSPDLTNENIKKLKELFPEILTDGEQIDFDKLKTILGQEVNGEKERYSFNWHGKKEAILGAQKPSKGTLRPDKEKSKNFGTTENLYIEGDNLEVLKLLQKSYSNKIKMIYIDPPYNTGYDLIYKNDFKDDIKNYLKYTGQIDGNNGILHTNSDYDGKVHTNWLNMMYSRIKVSKSLLKKDGVFVIAIDHYEVANLIKICDEIFGESNKLGVISVIHKPEGRNQARHFGPSNEFALFYARDKNTFNFEKNIIDEELKKLYDQKDEKGLYRLKNFIRLSDGKYSLRESKPDFFYPIYVSKDLKKISIEKFDNSIPVYPVTKTGVERTWKTSKTTCEARIRQKDIIAVIEDNEVIIYEKLRENQVLKTHWIKKQYHAYHYGTKVLDNLLGIKTFDFPKSLNLIKDTLNICINESDIILDFFSGSATTAHATMQLNAEDGGNRKFIMVQLPEKLDEKSEAYKDGYRTICDIGEERIRRAGELVKQELIEKNNKAGMLADDFVDPEQLDIGFKVMKLDKSNIREWNSDFEDLEDNLFAYEDVFVEGRSELDVVYEIMLKNGLDLTYKVNQFEHDGRNIYDVAYGNLFVCLADDIDVSVAQGIINKRNEYGTDTSSVVFKDTGFKSDADKLNVIELLKDSGYPEENILSI . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 12576 14528 . + . GCA_005502385.1_00328_mRNA GCA_005502385.1_00328 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNKVPSSSPDLTNENIKKLKELFPEILTDGEQIDFDKLKTILGQEVNGEKERYSFNWHGKKEAILGAQKPSKGTLRPDKEKSKNFGTTENLYIEGDNLEVLKLLQKSYSNKIKMIYIDPPYNTGYDLIYKNDFKDDIKNYLKYTGQIDGNNGILHTNSDYDGKVHTNWLNMMYSRIKVSKSLLKKDGVFVIAIDHYEVANLIKICDEIFGESNKLGVISVIHKPEGRNQARHFGPSNEFALFYARDKNTFNFEKNIIDEELKKLYDQKDEKGLYRLKNFIRLSDGKYSLRESKPDFFYPIYVSKDLKKISIEKFDNSIPVYPVTKTGVERTWKTSKTTCEARIRQKDIIAVIEDNEVIIYEKLRENQVLKTHWIKKQYHAYHYGTKVLDNLLGIKTFDFPKSLNLIKDTLNICINESDIILDFFSGSATTAHATMQLNAEDGGNRKFIMVQLPEKLDEKSEAYKDGYRTICDIGEERIRRAGELVKQELIEKNNKAGMLADDFVDPEQLDIGFKVMKLDKSNIREWNSDFEDLEDNLFAYEDVFVEGRSELDVVYEIMLKNGLDLTYKVNQFEHDGRNIYDVAYGNLFVCLADDIDVSVAQGIINKRNEYGTDTSSVVFKDTGFKSDADKLNVIELLKDSGYPEENILSI . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 12576 14528 . + 0 GCA_005502385.1_00328 GCA_005502385.1_00328_gene,GCA_005502385.1_00328_mRNA GCA_005502385.1_00328 hypothetical protein """""" GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNKVPSSSPDLTNENIKKLKELFPEILTDGEQIDFDKLKTILGQEVNGEKERYSFNWHGKKEAILGAQKPSKGTLRPDKEKSKNFGTTENLYIEGDNLEVLKLLQKSYSNKIKMIYIDPPYNTGYDLIYKNDFKDDIKNYLKYTGQIDGNNGILHTNSDYDGKVHTNWLNMMYSRIKVSKSLLKKDGVFVIAIDHYEVANLIKICDEIFGESNKLGVISVIHKPEGRNQARHFGPSNEFALFYARDKNTFNFEKNIIDEELKKLYDQKDEKGLYRLKNFIRLSDGKYSLRESKPDFFYPIYVSKDLKKISIEKFDNSIPVYPVTKTGVERTWKTSKTTCEARIRQKDIIAVIEDNEVIIYEKLRENQVLKTHWIKKQYHAYHYGTKVLDNLLGIKTFDFPKSLNLIKDTLNICINESDIILDFFSGSATTAHATMQLNAEDGGNRKFIMVQLPEKLDEKSEAYKDGYRTICDIGEERIRRAGELVKQELIEKNNKAGMLADDFVDPEQLDIGFKVMKLDKSNIREWNSDFEDLEDNLFAYEDVFVEGRSELDVVYEIMLKNGLDLTYKVNQFEHDGRNIYDVAYGNLFVCLADDIDVSVAQGIINKRNEYGTDTSSVVFKDTGFKSDADKLNVIELLKDSGYPEENILSI cloud 650 Site-specific DNA-methyltransferase UniRef50_A0A2T4PXC4,UniRef90_A0A5B2YXG4 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 14541 16511 . + . GCA_005502385.1_00329_gene GCA_005502385.1_00329 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKMNGESLDITKDNIDKLKQLFPEILTDGDKIDFEKLKTVLGEEIEGEKERYSFNWYGKKNAILGAQTPSKGTLRPDKEKSKYFDMTENLYIEGDNLEVLKLLQKSYSNKIKMIYIDPPYNTGKDFVYKDNFRNGVENYLEQTGQTDDEGNRLSTNSENNGRYHTDWLNMMYPRLKLARNLLANDGVIFISIDDTEENRLKNICDEIFGEQNLIAKITHKNNSNKNQSKYIGVSTEYMFVYAKSLYTLPNELWKLRKRYVDEALKIFGELKNKGLSDEELTMEINELFKRPKFAHLSRWNKVDQKGIFMDADLSREGGNKNYTIINPFTNKKCPIPNRGWAKSYEELIELQNKDLIWYGNPITPPRMKDYLSEDRKTVPDNFWYFDNSIDVRWQKKEFGKYIFENPKPLNMIKQAIMLNTEKNDIVLDFFSGSATTAHATMQLNAEDGGNRRFIMVQLPEQLDEKSEAYKDGYRTICDIGEERIRRAGELVKQELIEKNTKVGMLADDIVDPERLDIGFKVLKLDKSNIREWNSDFEGLEDNLFAYEDVFVEDRSELDVVYEIMLKNGLELTYNVNQFEHEGKNVYDIAYGNLFVCLADNIDVSVAQIIVEKRNEYGTDTSSVVLKDAGFKSDADKLNVIELLKDSGYPEENILTI . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 14541 16511 . + . GCA_005502385.1_00329_mRNA GCA_005502385.1_00329 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKMNGESLDITKDNIDKLKQLFPEILTDGDKIDFEKLKTVLGEEIEGEKERYSFNWYGKKNAILGAQTPSKGTLRPDKEKSKYFDMTENLYIEGDNLEVLKLLQKSYSNKIKMIYIDPPYNTGKDFVYKDNFRNGVENYLEQTGQTDDEGNRLSTNSENNGRYHTDWLNMMYPRLKLARNLLANDGVIFISIDDTEENRLKNICDEIFGEQNLIAKITHKNNSNKNQSKYIGVSTEYMFVYAKSLYTLPNELWKLRKRYVDEALKIFGELKNKGLSDEELTMEINELFKRPKFAHLSRWNKVDQKGIFMDADLSREGGNKNYTIINPFTNKKCPIPNRGWAKSYEELIELQNKDLIWYGNPITPPRMKDYLSEDRKTVPDNFWYFDNSIDVRWQKKEFGKYIFENPKPLNMIKQAIMLNTEKNDIVLDFFSGSATTAHATMQLNAEDGGNRRFIMVQLPEQLDEKSEAYKDGYRTICDIGEERIRRAGELVKQELIEKNTKVGMLADDIVDPERLDIGFKVLKLDKSNIREWNSDFEGLEDNLFAYEDVFVEDRSELDVVYEIMLKNGLELTYNVNQFEHEGKNVYDIAYGNLFVCLADNIDVSVAQIIVEKRNEYGTDTSSVVLKDAGFKSDADKLNVIELLKDSGYPEENILTI . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 14541 16511 . + 0 GCA_005502385.1_00329 GCA_005502385.1_00329_gene,GCA_005502385.1_00329_mRNA GCA_005502385.1_00329 hypothetical protein """""" GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKMNGESLDITKDNIDKLKQLFPEILTDGDKIDFEKLKTVLGEEIEGEKERYSFNWYGKKNAILGAQTPSKGTLRPDKEKSKYFDMTENLYIEGDNLEVLKLLQKSYSNKIKMIYIDPPYNTGKDFVYKDNFRNGVENYLEQTGQTDDEGNRLSTNSENNGRYHTDWLNMMYPRLKLARNLLANDGVIFISIDDTEENRLKNICDEIFGEQNLIAKITHKNNSNKNQSKYIGVSTEYMFVYAKSLYTLPNELWKLRKRYVDEALKIFGELKNKGLSDEELTMEINELFKRPKFAHLSRWNKVDQKGIFMDADLSREGGNKNYTIINPFTNKKCPIPNRGWAKSYEELIELQNKDLIWYGNPITPPRMKDYLSEDRKTVPDNFWYFDNSIDVRWQKKEFGKYIFENPKPLNMIKQAIMLNTEKNDIVLDFFSGSATTAHATMQLNAEDGGNRRFIMVQLPEQLDEKSEAYKDGYRTICDIGEERIRRAGELVKQELIEKNTKVGMLADDIVDPERLDIGFKVLKLDKSNIREWNSDFEGLEDNLFAYEDVFVEDRSELDVVYEIMLKNGLELTYNVNQFEHEGKNVYDIAYGNLFVCLADNIDVSVAQIIVEKRNEYGTDTSSVVLKDAGFKSDADKLNVIELLKDSGYPEENILTI cloud 656 site-specific DNA-methyltransferase UniRef50_A0A2T4PXC4,UniRef90_UPI00105BB872 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 16523 19498 . + . GCA_005502385.1_00330_gene GCA_005502385.1_00330 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKIQFDELNYQQDAINSVLHVFEGHEINQSLFTISDKRNQGSFFGEHGVGNKVIKNYERMLKNVNQIQIDNGIPISDSIPLPFPQFNIEMETGTGKTFVYLKSILELNKSYGFTKFVIVVPSVAIKEGVMKTIEVTKDYFKAQMNSVIYNSFMYNSSKLDEVRNFAESNNIEIMVINIQAFSKGKKNNDNMNIIYRDDMDKLNGIRPIDLIAETNPIIIIDEPQSVDNTENAKKAIEALNPSVSFRYSATHKNTEYPLLYRLGPVEAYQHELVKQIEVAGIKNDVDGNEAYIKLLNVKSNKTTITASVEMYVSSKGNIDKKQIKLKQGDDLYLKSKRISTYEKVGFVQEISAEPGNEYIEFSGEPSIIRLSQSNENDRQIKRGQIRKTIEEHLDKELKLNSQGIKVLSLFFIDKVEKYRSYDENKNMVKEEYAQIFEAEYNKLIKKEKYKSLIDRHIPAEEVHDGYFSVDGKGIPKNTKGNTAADESTYKIIMKDKEQLLTMYNAEKGKTDKANKIRFIFSHSALKEGWDNPNVFQICTLIETKDTITKRQKIGRGLRIAVNQEGQRVPGFETNTLTVMANESYEDFANGLQREYEEEGMKFGIFEENSFSSIVIGTNDLGEKIPLGTAKSKILIKFMKENKYIDSKGKGSLKLAEAIEKDELELPEEILNINEKMKDSITDFVKNIFDTNKVDIKNKDERVSIKVRKELLSGPFLEIWDKIKYKTKYVISFDSDAFIHTASAKLREELSVKIAKLEYQKVNIVTDQSGVRTINETSTGFEASEEEYTESPDIISYLQNETKLTRKTLIRILSNSETLRDFRRNPQMYMMETARIINSAKKNVIVDGVKYERNNEEYEQSLFLTDELSSYTTNALKVNDNRSLYDHIIYDSKVEKEFAIECEKDENVKFYIKLPSWFKVKTPLGPYNPDWAVLLEKFGKEKLYFIVETKGSIASEDLRPTELAKIKCGKKHFDAIDTGIDFVKETSLKNIY . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 16523 19498 . + . GCA_005502385.1_00330_mRNA GCA_005502385.1_00330 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKIQFDELNYQQDAINSVLHVFEGHEINQSLFTISDKRNQGSFFGEHGVGNKVIKNYERMLKNVNQIQIDNGIPISDSIPLPFPQFNIEMETGTGKTFVYLKSILELNKSYGFTKFVIVVPSVAIKEGVMKTIEVTKDYFKAQMNSVIYNSFMYNSSKLDEVRNFAESNNIEIMVINIQAFSKGKKNNDNMNIIYRDDMDKLNGIRPIDLIAETNPIIIIDEPQSVDNTENAKKAIEALNPSVSFRYSATHKNTEYPLLYRLGPVEAYQHELVKQIEVAGIKNDVDGNEAYIKLLNVKSNKTTITASVEMYVSSKGNIDKKQIKLKQGDDLYLKSKRISTYEKVGFVQEISAEPGNEYIEFSGEPSIIRLSQSNENDRQIKRGQIRKTIEEHLDKELKLNSQGIKVLSLFFIDKVEKYRSYDENKNMVKEEYAQIFEAEYNKLIKKEKYKSLIDRHIPAEEVHDGYFSVDGKGIPKNTKGNTAADESTYKIIMKDKEQLLTMYNAEKGKTDKANKIRFIFSHSALKEGWDNPNVFQICTLIETKDTITKRQKIGRGLRIAVNQEGQRVPGFETNTLTVMANESYEDFANGLQREYEEEGMKFGIFEENSFSSIVIGTNDLGEKIPLGTAKSKILIKFMKENKYIDSKGKGSLKLAEAIEKDELELPEEILNINEKMKDSITDFVKNIFDTNKVDIKNKDERVSIKVRKELLSGPFLEIWDKIKYKTKYVISFDSDAFIHTASAKLREELSVKIAKLEYQKVNIVTDQSGVRTINETSTGFEASEEEYTESPDIISYLQNETKLTRKTLIRILSNSETLRDFRRNPQMYMMETARIINSAKKNVIVDGVKYERNNEEYEQSLFLTDELSSYTTNALKVNDNRSLYDHIIYDSKVEKEFAIECEKDENVKFYIKLPSWFKVKTPLGPYNPDWAVLLEKFGKEKLYFIVETKGSIASEDLRPTELAKIKCGKKHFDAIDTGIDFVKETSLKNIY . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 16523 19498 . + 0 GCA_005502385.1_00330 GCA_005502385.1_00330_gene,GCA_005502385.1_00330_mRNA GCA_005502385.1_00330 hypothetical protein """""" GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKIQFDELNYQQDAINSVLHVFEGHEINQSLFTISDKRNQGSFFGEHGVGNKVIKNYERMLKNVNQIQIDNGIPISDSIPLPFPQFNIEMETGTGKTFVYLKSILELNKSYGFTKFVIVVPSVAIKEGVMKTIEVTKDYFKAQMNSVIYNSFMYNSSKLDEVRNFAESNNIEIMVINIQAFSKGKKNNDNMNIIYRDDMDKLNGIRPIDLIAETNPIIIIDEPQSVDNTENAKKAIEALNPSVSFRYSATHKNTEYPLLYRLGPVEAYQHELVKQIEVAGIKNDVDGNEAYIKLLNVKSNKTTITASVEMYVSSKGNIDKKQIKLKQGDDLYLKSKRISTYEKVGFVQEISAEPGNEYIEFSGEPSIIRLSQSNENDRQIKRGQIRKTIEEHLDKELKLNSQGIKVLSLFFIDKVEKYRSYDENKNMVKEEYAQIFEAEYNKLIKKEKYKSLIDRHIPAEEVHDGYFSVDGKGIPKNTKGNTAADESTYKIIMKDKEQLLTMYNAEKGKTDKANKIRFIFSHSALKEGWDNPNVFQICTLIETKDTITKRQKIGRGLRIAVNQEGQRVPGFETNTLTVMANESYEDFANGLQREYEEEGMKFGIFEENSFSSIVIGTNDLGEKIPLGTAKSKILIKFMKENKYIDSKGKGSLKLAEAIEKDELELPEEILNINEKMKDSITDFVKNIFDTNKVDIKNKDERVSIKVRKELLSGPFLEIWDKIKYKTKYVISFDSDAFIHTASAKLREELSVKIAKLEYQKVNIVTDQSGVRTINETSTGFEASEEEYTESPDIISYLQNETKLTRKTLIRILSNSETLRDFRRNPQMYMMETARIINSAKKNVIVDGVKYERNNEEYEQSLFLTDELSSYTTNALKVNDNRSLYDHIIYDSKVEKEFAIECEKDENVKFYIKLPSWFKVKTPLGPYNPDWAVLLEKFGKEKLYFIVETKGSIASEDLRPTELAKIKCGKKHFDAIDTGIDFVKETSLKNIY cloud 991 DEAD/DEAH box helicase 3.1.21.5 UniRef50_A0A7X8C2U6,UniRef90_A0A5B2YU24 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 19817 20563 . + . GCA_005502385.1_00331_gene GCA_005502385.1_00331 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MLTEQQKIDELFSKLDRQIELEEQKLEKLEEQKKGYMQKIFAQELRFKDENGNDYPEWQLKNLSELGETFTGLSGKNKDDFGYEDGLFITYMNVFKNTIAKSDMVERVKIETNKNQNKVQYGDILFTTSSEVPNEVGMSSIWLFNQDNVYLNSFGFRVVANYIKPIYLARYLRSEKMRKTITILAQGSTRFNISKKEMMKLNIKVPYIEEQSKIDNFFNKIDKHIEKQSEKIELLKQRKKGLLQKMFV . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 19817 20563 . + . GCA_005502385.1_00331_mRNA GCA_005502385.1_00331 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MLTEQQKIDELFSKLDRQIELEEQKLEKLEEQKKGYMQKIFAQELRFKDENGNDYPEWQLKNLSELGETFTGLSGKNKDDFGYEDGLFITYMNVFKNTIAKSDMVERVKIETNKNQNKVQYGDILFTTSSEVPNEVGMSSIWLFNQDNVYLNSFGFRVVANYIKPIYLARYLRSEKMRKTITILAQGSTRFNISKKEMMKLNIKVPYIEEQSKIDNFFNKIDKHIEKQSEKIELLKQRKKGLLQKMFV . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 19817 20563 . + 0 GCA_005502385.1_00331 GCA_005502385.1_00331_gene,GCA_005502385.1_00331_mRNA GCA_005502385.1_00331 hypothetical protein GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MLTEQQKIDELFSKLDRQIELEEQKLEKLEEQKKGYMQKIFAQELRFKDENGNDYPEWQLKNLSELGETFTGLSGKNKDDFGYEDGLFITYMNVFKNTIAKSDMVERVKIETNKNQNKVQYGDILFTTSSEVPNEVGMSSIWLFNQDNVYLNSFGFRVVANYIKPIYLARYLRSEKMRKTITILAQGSTRFNISKKEMMKLNIKVPYIEEQSKIDNFFNKIDKHIEKQSEKIELLKQRKKGLLQKMFV cloud 248 restriction endonuclease subunit S 3.1.21.3 WP_053092401.1 UPI00069F3E0D UniRef100_UPI00069F3E0D,UniRef50_UPI0030ED6E33,UniRef90_UPI0030ED6E33 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 20633 23599 . + . GCA_005502385.1_00332_gene GCA_005502385.1_00332 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MRDKMRIKDSQLSNRCKNQLIKNGYDYVYQLKKLTDEDLKNIKNLGAKSIQEIQEFRDSITFKNNDDIIIPKDITIEALKSMNIEKVINNENIKKIMKINNIKLIDAVIDLSYEDIKKFRKVDDQLISEIQSICNRLREKINLVDRDLFKLVLNNPDKDIRRVIYENIPKTLLNCTIKYFFKSRYVNELNIEELGFSNKERKIVLTYNLNKIDRLLLVSYDDLLNIPGIAKKTLNDIFEKLFKYVVVQNKNEIFIGDISRIYLKKSPYNYLLVIREKQLNNILVNLDNVINEVLNNEQFSISYKLDLLIENQFITKRIKEMIFNEDIEQEIVYSFIKNNSYMYRKKEICDELTSHFTNLNVYKYFNNLIKLDLISIDEFGNVYSKKYSILSYTADNYNENILELMKLRLEGKTLEEIGNAIGVTRERVRQLVKKVTSSTKQIFKEDENAYWFSNYNLDKKQYEWLLEDSLYYYLSNRYEKGTKSWKDILNDEKASVKLKKKVRDELLKGKIVIDNKLIPKTRISIIDYVLEEFGKETLHINDLLEIINLFLEEQRLDKEVFNIDIRYLENRLSDTSNAVSRGKKYYRYYAYDEYDWDLFYEKINFEEWKDLEISTLILFKYHSLLMEKYNIKHENELHNIIRRTSEKRRDLNIELTRMPSIAIGNVDREQQVKDFMYEYAPLHVDEFVQLYYEAFGVKEQTFRANYLKYIDDYIVDDYIKKDFVSINEESLSCVKNVLDGKEFMFIEDLKKELNQVDTDLQIILKYLDYKTFSSYILKNKYETTINYYNEKFYNNMDIVDLTNIDKRIWNLSSFGSWLYDKYKTMELLEFSPKKYITRKKLNEIGLTPNVLEDFRHKVLEKLDDNKVWSISAIIVVVDNEKIDSFGFEPIFYRSILRGLENIYSNKIGGNYLLKKDQDFRVSDLIEEEVMKVKMIDIFDLTEIINEKYDINLEYYRLIESIKRTDMYYDEIMEKIYLDLNYYYEEFEY . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 20633 23599 . + . GCA_005502385.1_00332_mRNA GCA_005502385.1_00332 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MRDKMRIKDSQLSNRCKNQLIKNGYDYVYQLKKLTDEDLKNIKNLGAKSIQEIQEFRDSITFKNNDDIIIPKDITIEALKSMNIEKVINNENIKKIMKINNIKLIDAVIDLSYEDIKKFRKVDDQLISEIQSICNRLREKINLVDRDLFKLVLNNPDKDIRRVIYENIPKTLLNCTIKYFFKSRYVNELNIEELGFSNKERKIVLTYNLNKIDRLLLVSYDDLLNIPGIAKKTLNDIFEKLFKYVVVQNKNEIFIGDISRIYLKKSPYNYLLVIREKQLNNILVNLDNVINEVLNNEQFSISYKLDLLIENQFITKRIKEMIFNEDIEQEIVYSFIKNNSYMYRKKEICDELTSHFTNLNVYKYFNNLIKLDLISIDEFGNVYSKKYSILSYTADNYNENILELMKLRLEGKTLEEIGNAIGVTRERVRQLVKKVTSSTKQIFKEDENAYWFSNYNLDKKQYEWLLEDSLYYYLSNRYEKGTKSWKDILNDEKASVKLKKKVRDELLKGKIVIDNKLIPKTRISIIDYVLEEFGKETLHINDLLEIINLFLEEQRLDKEVFNIDIRYLENRLSDTSNAVSRGKKYYRYYAYDEYDWDLFYEKINFEEWKDLEISTLILFKYHSLLMEKYNIKHENELHNIIRRTSEKRRDLNIELTRMPSIAIGNVDREQQVKDFMYEYAPLHVDEFVQLYYEAFGVKEQTFRANYLKYIDDYIVDDYIKKDFVSINEESLSCVKNVLDGKEFMFIEDLKKELNQVDTDLQIILKYLDYKTFSSYILKNKYETTINYYNEKFYNNMDIVDLTNIDKRIWNLSSFGSWLYDKYKTMELLEFSPKKYITRKKLNEIGLTPNVLEDFRHKVLEKLDDNKVWSISAIIVVVDNEKIDSFGFEPIFYRSILRGLENIYSNKIGGNYLLKKDQDFRVSDLIEEEVMKVKMIDIFDLTEIINEKYDINLEYYRLIESIKRTDMYYDEIMEKIYLDLNYYYEEFEY . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 20633 23599 . + 0 GCA_005502385.1_00332 GCA_005502385.1_00332_gene,GCA_005502385.1_00332_mRNA GCA_005502385.1_00332 DNA-directed RNA polymerase subunit alpha GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MRDKMRIKDSQLSNRCKNQLIKNGYDYVYQLKKLTDEDLKNIKNLGAKSIQEIQEFRDSITFKNNDDIIIPKDITIEALKSMNIEKVINNENIKKIMKINNIKLIDAVIDLSYEDIKKFRKVDDQLISEIQSICNRLREKINLVDRDLFKLVLNNPDKDIRRVIYENIPKTLLNCTIKYFFKSRYVNELNIEELGFSNKERKIVLTYNLNKIDRLLLVSYDDLLNIPGIAKKTLNDIFEKLFKYVVVQNKNEIFIGDISRIYLKKSPYNYLLVIREKQLNNILVNLDNVINEVLNNEQFSISYKLDLLIENQFITKRIKEMIFNEDIEQEIVYSFIKNNSYMYRKKEICDELTSHFTNLNVYKYFNNLIKLDLISIDEFGNVYSKKYSILSYTADNYNENILELMKLRLEGKTLEEIGNAIGVTRERVRQLVKKVTSSTKQIFKEDENAYWFSNYNLDKKQYEWLLEDSLYYYLSNRYEKGTKSWKDILNDEKASVKLKKKVRDELLKGKIVIDNKLIPKTRISIIDYVLEEFGKETLHINDLLEIINLFLEEQRLDKEVFNIDIRYLENRLSDTSNAVSRGKKYYRYYAYDEYDWDLFYEKINFEEWKDLEISTLILFKYHSLLMEKYNIKHENELHNIIRRTSEKRRDLNIELTRMPSIAIGNVDREQQVKDFMYEYAPLHVDEFVQLYYEAFGVKEQTFRANYLKYIDDYIVDDYIKKDFVSINEESLSCVKNVLDGKEFMFIEDLKKELNQVDTDLQIILKYLDYKTFSSYILKNKYETTINYYNEKFYNNMDIVDLTNIDKRIWNLSSFGSWLYDKYKTMELLEFSPKKYITRKKLNEIGLTPNVLEDFRHKVLEKLDDNKVWSISAIIVVVDNEKIDSFGFEPIFYRSILRGLENIYSNKIGGNYLLKKDQDFRVSDLIEEEVMKVKMIDIFDLTEIINEKYDINLEYYRLIESIKRTDMYYDEIMEKIYLDLNYYYEEFEY cloud 988 hypothetical protein UniRef50_A0A221KKX1,UniRef90_A0A221KKX1 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 23599 24831 . + . GCA_005502385.1_00333_gene GCA_005502385.1_00333 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNMINTNELIKTNLTTRLTVDGITDEYDVYKIKLDNLYYNDQNDRIATWISKYKADNHLESFDLSNIEEYNKIIANFIRESDENAFKKTKNNIKALGQTEPAVILRDGRIIDGNRRFTCLRDLAKEDLKFNYLDAIIISKDIQDSKKEIKLLELYLQHGREERVGYNPIDRLVGVYNDVIKNKLITVEEYAKNTGQKTSEVTKLIDRANLMVEFLEFIDMPEHYYLARDWELDGPLGEIKAVLNKIKTEEEREDVKNIIFTNIALKPNTDMTRYIRKIKNLVNTSQFKPFIEDNLELCERFLEKFDDKEEETTVEFINKEVRGDEELKDDLKNTYDKYQEKVKKRNSINAPKNQIEKAIDALQNIDFDIVLRLNDETDYPQFLNSLERLEEEIENIKHEVYGNVSSSNKS . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 23599 24831 . + . GCA_005502385.1_00333_mRNA GCA_005502385.1_00333 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNMINTNELIKTNLTTRLTVDGITDEYDVYKIKLDNLYYNDQNDRIATWISKYKADNHLESFDLSNIEEYNKIIANFIRESDENAFKKTKNNIKALGQTEPAVILRDGRIIDGNRRFTCLRDLAKEDLKFNYLDAIIISKDIQDSKKEIKLLELYLQHGREERVGYNPIDRLVGVYNDVIKNKLITVEEYAKNTGQKTSEVTKLIDRANLMVEFLEFIDMPEHYYLARDWELDGPLGEIKAVLNKIKTEEEREDVKNIIFTNIALKPNTDMTRYIRKIKNLVNTSQFKPFIEDNLELCERFLEKFDDKEEETTVEFINKEVRGDEELKDDLKNTYDKYQEKVKKRNSINAPKNQIEKAIDALQNIDFDIVLRLNDETDYPQFLNSLERLEEEIENIKHEVYGNVSSSNKS . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 23599 24831 . + 0 GCA_005502385.1_00333 GCA_005502385.1_00333_gene,GCA_005502385.1_00333_mRNA GCA_005502385.1_00333 hypothetical protein GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNMINTNELIKTNLTTRLTVDGITDEYDVYKIKLDNLYYNDQNDRIATWISKYKADNHLESFDLSNIEEYNKIIANFIRESDENAFKKTKNNIKALGQTEPAVILRDGRIIDGNRRFTCLRDLAKEDLKFNYLDAIIISKDIQDSKKEIKLLELYLQHGREERVGYNPIDRLVGVYNDVIKNKLITVEEYAKNTGQKTSEVTKLIDRANLMVEFLEFIDMPEHYYLARDWELDGPLGEIKAVLNKIKTEEEREDVKNIIFTNIALKPNTDMTRYIRKIKNLVNTSQFKPFIEDNLELCERFLEKFDDKEEETTVEFINKEVRGDEELKDDLKNTYDKYQEKVKKRNSINAPKNQIEKAIDALQNIDFDIVLRLNDETDYPQFLNSLERLEEEIENIKHEVYGNVSSSNKS cloud 410 ParB/Sulfiredoxin domain-containing protein WP_049382299.1 UPI00066CA092 UniRef100_UPI00066CA092,UniRef50_A0AAP7IAY3,UniRef90_A0A221KKW5 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 24806 26677 . + . GCA_005502385.1_00334_gene GCA_005502385.1_00334 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MFQVQINHNEELTLEANEQLLKKVIKHRIYKLRIKKYVKEYTNSKIVFRKNVYYKDIYNIVEQIKKLAIKLGVSVNINENVTQYINRINSYIDYKYTIGNDIKNDDLRFNERYFEFERIVNQALERQLRPKQMKDAFYLTMMQKSGNFSVPGSGKTSTVYGMYAYLNAINKVNKILMIGPLNSFSSWITEYQSCFGDSRKLTYLNIKDLNTTNEKKMVLKYESFNKELILLNYEVLNTLEEEIKDLITEDTLVVFDEVHRIKNPVGMRAGSALRITKDAKYMVALTGTPIPNGYKDIYNLLNLLYPYDYNHFFNFEIPLLSNPNKSEIKMINDKIQPFFTRTSKEELGVPPSNEDKIIDIEASLEEQELFKIILSKYKSNQLALFAKIMQLESSPSLLLETLDLKEFEEMLDLSVNHEKFVEYQDYSKEVEELVYKIDKTSKMKELLKLINRIVSESKTAIVWCIFVKTMYKLKSDLNKMGIKAEVISGAVSQDERNRIINKFKNKEVEILITNPHTLAESVSLHKTCHDAIYFEYSYNLVHLLQSKDRIHRLGLKSDDYTQYYYFQQYYQMEQGNYSLGERIYKRLSEKEQLMLDAIDNHELEILPTEDEDLEFFFTHLIDK . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 24806 26677 . + . GCA_005502385.1_00334_mRNA GCA_005502385.1_00334 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MFQVQINHNEELTLEANEQLLKKVIKHRIYKLRIKKYVKEYTNSKIVFRKNVYYKDIYNIVEQIKKLAIKLGVSVNINENVTQYINRINSYIDYKYTIGNDIKNDDLRFNERYFEFERIVNQALERQLRPKQMKDAFYLTMMQKSGNFSVPGSGKTSTVYGMYAYLNAINKVNKILMIGPLNSFSSWITEYQSCFGDSRKLTYLNIKDLNTTNEKKMVLKYESFNKELILLNYEVLNTLEEEIKDLITEDTLVVFDEVHRIKNPVGMRAGSALRITKDAKYMVALTGTPIPNGYKDIYNLLNLLYPYDYNHFFNFEIPLLSNPNKSEIKMINDKIQPFFTRTSKEELGVPPSNEDKIIDIEASLEEQELFKIILSKYKSNQLALFAKIMQLESSPSLLLETLDLKEFEEMLDLSVNHEKFVEYQDYSKEVEELVYKIDKTSKMKELLKLINRIVSESKTAIVWCIFVKTMYKLKSDLNKMGIKAEVISGAVSQDERNRIINKFKNKEVEILITNPHTLAESVSLHKTCHDAIYFEYSYNLVHLLQSKDRIHRLGLKSDDYTQYYYFQQYYQMEQGNYSLGERIYKRLSEKEQLMLDAIDNHELEILPTEDEDLEFFFTHLIDK . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 24806 26677 . + 0 GCA_005502385.1_00334 GCA_005502385.1_00334_gene,GCA_005502385.1_00334_mRNA GCA_005502385.1_00334 ATP-dependent RNA helicase RhlB GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MFQVQINHNEELTLEANEQLLKKVIKHRIYKLRIKKYVKEYTNSKIVFRKNVYYKDIYNIVEQIKKLAIKLGVSVNINENVTQYINRINSYIDYKYTIGNDIKNDDLRFNERYFEFERIVNQALERQLRPKQMKDAFYLTMMQKSGNFSVPGSGKTSTVYGMYAYLNAINKVNKILMIGPLNSFSSWITEYQSCFGDSRKLTYLNIKDLNTTNEKKMVLKYESFNKELILLNYEVLNTLEEEIKDLITEDTLVVFDEVHRIKNPVGMRAGSALRITKDAKYMVALTGTPIPNGYKDIYNLLNLLYPYDYNHFFNFEIPLLSNPNKSEIKMINDKIQPFFTRTSKEELGVPPSNEDKIIDIEASLEEQELFKIILSKYKSNQLALFAKIMQLESSPSLLLETLDLKEFEEMLDLSVNHEKFVEYQDYSKEVEELVYKIDKTSKMKELLKLINRIVSESKTAIVWCIFVKTMYKLKSDLNKMGIKAEVISGAVSQDERNRIINKFKNKEVEILITNPHTLAESVSLHKTCHDAIYFEYSYNLVHLLQSKDRIHRLGLKSDDYTQYYYFQQYYQMEQGNYSLGERIYKRLSEKEQLMLDAIDNHELEILPTEDEDLEFFFTHLIDK cloud 623 ATP-dependent helicase UniRef50_A0A221KKW6,UniRef90_A0A221KKW6 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 27555 28349 . + . GCA_005502385.1_00335_gene GCA_005502385.1_00335 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MGTLFSLITFILLLVLTAFFVATELAIVKVRETRIAQLSNAGEKKAIAAKKVVDHLDEYLAACQLGITITALGIGMVGESTFEFILHPLFSSIGIPEAWIHPFTIGGAFVIATFLHVVVGEMAPKTIAIQKAEYITLLFAKPIIFFYKIMYPFIWLLNGAARLILKMFNMKPAKESEVFHSEEELKQLIQDSHEGGEINDSELHHINQAFKFDNLVAKDIMIDQEHVKTLNLNTRFDDAIQQIKVDAFTRYPAIKDDQIFQVII . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 27555 28349 . + . GCA_005502385.1_00335_mRNA GCA_005502385.1_00335 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MGTLFSLITFILLLVLTAFFVATELAIVKVRETRIAQLSNAGEKKAIAAKKVVDHLDEYLAACQLGITITALGIGMVGESTFEFILHPLFSSIGIPEAWIHPFTIGGAFVIATFLHVVVGEMAPKTIAIQKAEYITLLFAKPIIFFYKIMYPFIWLLNGAARLILKMFNMKPAKESEVFHSEEELKQLIQDSHEGGEINDSELHHINQAFKFDNLVAKDIMIDQEHVKTLNLNTRFDDAIQQIKVDAFTRYPAIKDDQIFQVII . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 27555 28349 . + 0 GCA_005502385.1_00335 GCA_005502385.1_00335_gene,GCA_005502385.1_00335_mRNA GCA_005502385.1_00335 putative protein GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MGTLFSLITFILLLVLTAFFVATELAIVKVRETRIAQLSNAGEKKAIAAKKVVDHLDEYLAACQLGITITALGIGMVGESTFEFILHPLFSSIGIPEAWIHPFTIGGAFVIATFLHVVVGEMAPKTIAIQKAEYITLLFAKPIIFFYKIMYPFIWLLNGAARLILKMFNMKPAKESEVFHSEEELKQLIQDSHEGGEINDSELHHINQAFKFDNLVAKDIMIDQEHVKTLNLNTRFDDAIQQIKVDAFTRYPAIKDDQIFQVII shell 264 CNNM transmembrane domain-containing protein UniRef50_A0A1H9UTR3 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 28321 28557 . + . GCA_005502385.1_00336_gene GCA_005502385.1_00336 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MIKYSKSLFNVDQPSKLATFVNPIINVKLNTPLKHILEMMKKKKVHIAAVYDDADFKGIITLENILEEIVGDIEDEYN . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 28321 28557 . + . GCA_005502385.1_00336_mRNA GCA_005502385.1_00336 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MIKYSKSLFNVDQPSKLATFVNPIINVKLNTPLKHILEMMKKKKVHIAAVYDDADFKGIITLENILEEIVGDIEDEYN . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 28321 28557 . + 0 GCA_005502385.1_00336 GCA_005502385.1_00336_gene,GCA_005502385.1_00336_mRNA GCA_005502385.1_00336 hypothetical protein GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MIKYSKSLFNVDQPSKLATFVNPIINVKLNTPLKHILEMMKKKKVHIAAVYDDADFKGIITLENILEEIVGDIEDEYN shell 78 CBS domain-containing protein WP_260984174.1 UPI000B280FF2 UniRef100_UPI000B280FF2,UniRef50_UPI000B280FF2,UniRef90_UPI000B280FF2 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 29367 30695 . - . GCA_005502385.1_00337_gene GCA_005502385.1_00337 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MFFKQFYDKHLSQASYLIGCQKTGEAMIIDPIRDLSSYIRVADEEGLTITHAAETHIHADFASGIRDVAIKLNANIYVSGESDDTLGYKNMPNHTHFVQHNDDIYVGNIKLKVLHTPGHTPESISFLLTDEGAGAQVPMGLFSGDFIFVGDIGRPDLLEKAVKVEGSSEIGAKQMFKSIESIKDLPDYIQIWPGHGAGSPCGKSLGAIPMSTLGYEKQTNWAFSENNEATFIDKLISDQPAPPHHFAQMKKINQFGMNLYQPYTVYPATNTNRLTFDLRSKEAYHGGHIEGTINIPYDKNFINQIGWYLNYDQEINLIGDYHLVSKATHTLQLIGYEDVAGYQLPQSKIQTRSIHSEDITGNESHILDVRNDNEWNNGHLSQAVHVPHGKLLETDLPFNKNDVIYVHCQSGIRSSIAIGILEHKGYHNIINVNEGYKDIQLS . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 29367 30695 . - . GCA_005502385.1_00337_mRNA GCA_005502385.1_00337 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MFFKQFYDKHLSQASYLIGCQKTGEAMIIDPIRDLSSYIRVADEEGLTITHAAETHIHADFASGIRDVAIKLNANIYVSGESDDTLGYKNMPNHTHFVQHNDDIYVGNIKLKVLHTPGHTPESISFLLTDEGAGAQVPMGLFSGDFIFVGDIGRPDLLEKAVKVEGSSEIGAKQMFKSIESIKDLPDYIQIWPGHGAGSPCGKSLGAIPMSTLGYEKQTNWAFSENNEATFIDKLISDQPAPPHHFAQMKKINQFGMNLYQPYTVYPATNTNRLTFDLRSKEAYHGGHIEGTINIPYDKNFINQIGWYLNYDQEINLIGDYHLVSKATHTLQLIGYEDVAGYQLPQSKIQTRSIHSEDITGNESHILDVRNDNEWNNGHLSQAVHVPHGKLLETDLPFNKNDVIYVHCQSGIRSSIAIGILEHKGYHNIINVNEGYKDIQLS . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 29367 30695 . - 0 GCA_005502385.1_00337 GCA_005502385.1_00337_gene,GCA_005502385.1_00337_mRNA GCA_005502385.1_00337 Hydroxyacylglutathione hydrolase GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MFFKQFYDKHLSQASYLIGCQKTGEAMIIDPIRDLSSYIRVADEEGLTITHAAETHIHADFASGIRDVAIKLNANIYVSGESDDTLGYKNMPNHTHFVQHNDDIYVGNIKLKVLHTPGHTPESISFLLTDEGAGAQVPMGLFSGDFIFVGDIGRPDLLEKAVKVEGSSEIGAKQMFKSIESIKDLPDYIQIWPGHGAGSPCGKSLGAIPMSTLGYEKQTNWAFSENNEATFIDKLISDQPAPPHHFAQMKKINQFGMNLYQPYTVYPATNTNRLTFDLRSKEAYHGGHIEGTINIPYDKNFINQIGWYLNYDQEINLIGDYHLVSKATHTLQLIGYEDVAGYQLPQSKIQTRSIHSEDITGNESHILDVRNDNEWNNGHLSQAVHVPHGKLLETDLPFNKNDVIYVHCQSGIRSSIAIGILEHKGYHNIINVNEGYKDIQLS shell 442 cstB persulfide dioxygenase-sulfurtransferase CstB COG0607,P WP_049382301.1 UPI00066C8CC2 UniRef100_UPI00066C8CC2,UniRef50_G5ELA4,UniRef90_A0A380FXP9 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 30714 31781 . - . GCA_005502385.1_00338_gene GCA_005502385.1_00338 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MSQYKTKHINDFTKKELQELGSKGQLIDVRQPEEFELGHIKNALLHSVENIETFKQNKNKTYYIYCKSGNRSRKASQFLAQRGYDVVNLDGGYIAYEEQHHNDNLSKVKEDREIKDNRKTFNYSNLQCPGPIVNISKEIKNIAIGDQIEVVVTDHGFLNDINSWVKQTGHTLVRLNDSGNEIRAIIQKEENKNIEVTHTKSGTTIVLFSGELDKAVAAMIIANGAKAAGRDVTIFCTFWGLNALKKIQNQRIKKKGIAKLFDFMLPNSPINMPISKMNMFGLGNLMMRYVMKKKNVDTLPSLIDQAVEQGVKLIACTMSMDVMGITKEELRDDVEYGGVGAYIGYTEQANHNLFI . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 30714 31781 . - . GCA_005502385.1_00338_mRNA GCA_005502385.1_00338 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MSQYKTKHINDFTKKELQELGSKGQLIDVRQPEEFELGHIKNALLHSVENIETFKQNKNKTYYIYCKSGNRSRKASQFLAQRGYDVVNLDGGYIAYEEQHHNDNLSKVKEDREIKDNRKTFNYSNLQCPGPIVNISKEIKNIAIGDQIEVVVTDHGFLNDINSWVKQTGHTLVRLNDSGNEIRAIIQKEENKNIEVTHTKSGTTIVLFSGELDKAVAAMIIANGAKAAGRDVTIFCTFWGLNALKKIQNQRIKKKGIAKLFDFMLPNSPINMPISKMNMFGLGNLMMRYVMKKKNVDTLPSLIDQAVEQGVKLIACTMSMDVMGITKEELRDDVEYGGVGAYIGYTEQANHNLFI . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 30714 31781 . - 0 GCA_005502385.1_00338 GCA_005502385.1_00338_gene,GCA_005502385.1_00338_mRNA GCA_005502385.1_00338 Thiosulfate sulfurtransferase GlpE GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MSQYKTKHINDFTKKELQELGSKGQLIDVRQPEEFELGHIKNALLHSVENIETFKQNKNKTYYIYCKSGNRSRKASQFLAQRGYDVVNLDGGYIAYEEQHHNDNLSKVKEDREIKDNRKTFNYSNLQCPGPIVNISKEIKNIAIGDQIEVVVTDHGFLNDINSWVKQTGHTLVRLNDSGNEIRAIIQKEENKNIEVTHTKSGTTIVLFSGELDKAVAAMIIANGAKAAGRDVTIFCTFWGLNALKKIQNQRIKKKGIAKLFDFMLPNSPINMPISKMNMFGLGNLMMRYVMKKKNVDTLPSLIDQAVEQGVKLIACTMSMDVMGITKEELRDDVEYGGVGAYIGYTEQANHNLFI shell 355 Dihydroneopterin aldolase UniRef50_B9DJV1,UniRef90_F8WKF2 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 31920 32180 . + . GCA_005502385.1_00339_gene GCA_005502385.1_00339 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MEYNKKMINRIHRIQGQLNGVIKMMEEEKNCKDVISQLSASKSSIQRLMGIIISENLVECVKMSEENSEDSQALINEAVELLVKSK . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 31920 32180 . + . GCA_005502385.1_00339_mRNA GCA_005502385.1_00339 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MEYNKKMINRIHRIQGQLNGVIKMMEEEKNCKDVISQLSASKSSIQRLMGIIISENLVECVKMSEENSEDSQALINEAVELLVKSK . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 31920 32180 . + 0 GCA_005502385.1_00339 GCA_005502385.1_00339_gene,GCA_005502385.1_00339_mRNA GCA_005502385.1_00339 hypothetical protein GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MEYNKKMINRIHRIQGQLNGVIKMMEEEKNCKDVISQLSASKSSIQRLMGIIISENLVECVKMSEENSEDSQALINEAVELLVKSK shell 86 cstR persulfide-sensing transcriptional repressor CstR COG1937,K WP_049382303.1 UPI00066C2534 UniRef100_A0A380FX52,UniRef50_A0A725BA15,UniRef90_Q5HKB5 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 32177 32935 . + . GCA_005502385.1_00340_gene GCA_005502385.1_00340 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MISITTIIVMLVIGILGGFISGLVGIGGAIVIYPALLLLPPLFGLPTYSAYIASGLTSSQVFFSTLSGSLNAYKNKNFSRTLILNMGSGMVIGSMLGAILANLINVQFVNTVYIIIALLALILMFIKVTPSTSHIKFNRLLLITIGGIIGLVSGIVGAGGAFIIIPVLLVIFKLPMNMVVTNSIVIAFISSIGAFMIKLLQGYIPINSAIPLILGSILFTPLGMKMGQKIPDYIQKTIICILIVVAIIKLIF . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 32177 32935 . + . GCA_005502385.1_00340_mRNA GCA_005502385.1_00340 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MISITTIIVMLVIGILGGFISGLVGIGGAIVIYPALLLLPPLFGLPTYSAYIASGLTSSQVFFSTLSGSLNAYKNKNFSRTLILNMGSGMVIGSMLGAILANLINVQFVNTVYIIIALLALILMFIKVTPSTSHIKFNRLLLITIGGIIGLVSGIVGAGGAFIIIPVLLVIFKLPMNMVVTNSIVIAFISSIGAFMIKLLQGYIPINSAIPLILGSILFTPLGMKMGQKIPDYIQKTIICILIVVAIIKLIF . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 32177 32935 . + 0 GCA_005502385.1_00340 GCA_005502385.1_00340_gene,GCA_005502385.1_00340_mRNA GCA_005502385.1_00340 hypothetical protein GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MISITTIIVMLVIGILGGFISGLVGIGGAIVIYPALLLLPPLFGLPTYSAYIASGLTSSQVFFSTLSGSLNAYKNKNFSRTLILNMGSGMVIGSMLGAILANLINVQFVNTVYIIIALLALILMFIKVTPSTSHIKFNRLLLITIGGIIGLVSGIVGAGGAFIIIPVLLVIFKLPMNMVVTNSIVIAFISSIGAFMIKLLQGYIPINSAIPLILGSILFTPLGMKMGQKIPDYIQKTIICILIVVAIIKLIF shell 252 putative membrane transporter protein WP_002473148.1 UPI00024335EF UniRef100_A0A8I1BDQ3,UniRef50_A0A0H2G7M4,UniRef90_A0A380FUT8 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 33147 33314 . + . GCA_005502385.1_00341_gene GCA_005502385.1_00341 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MQNLWWGAGYNIVAVPLAAGILAFIGLILSPAIGAILMSLSTVIVTINAFTLKLK . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 33147 33314 . + . GCA_005502385.1_00341_mRNA GCA_005502385.1_00341 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MQNLWWGAGYNIVAVPLAAGILAFIGLILSPAIGAILMSLSTVIVTINAFTLKLK . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 33147 33314 . + 0 GCA_005502385.1_00341 GCA_005502385.1_00341_gene,GCA_005502385.1_00341_mRNA GCA_005502385.1_00341 Copper-exporting P-type ATPase B GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MQNLWWGAGYNIVAVPLAAGILAFIGLILSPAIGAILMSLSTVIVTINAFTLKLK persistent 55 ATPase copper transport UniRef50_A0A0U1MIP1,UniRef90_A0A0U1MIP1 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 33332 33877 . + . GCA_005502385.1_00342_gene GCA_005502385.1_00342 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MIKKLFFMILGSLLILSACSNNDEKDKDTNDQKSESHMKHNDESKVPEDMTSTNEGEFKVGDKVTITAGHMPGMKGAEATVKGAYKTYAYVVSYKPTNGNEKVNNHKWVVNEEIKDAPKDGFSKGDTVKLEANHMSGMKGATANIDNVKKTTVYVVDYKSKDNGKIIKNHKWMTGNELKAR . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 33332 33877 . + . GCA_005502385.1_00342_mRNA GCA_005502385.1_00342 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MIKKLFFMILGSLLILSACSNNDEKDKDTNDQKSESHMKHNDESKVPEDMTSTNEGEFKVGDKVTITAGHMPGMKGAEATVKGAYKTYAYVVSYKPTNGNEKVNNHKWVVNEEIKDAPKDGFSKGDTVKLEANHMSGMKGATANIDNVKKTTVYVVDYKSKDNGKIIKNHKWMTGNELKAR . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 33332 33877 . + 0 GCA_005502385.1_00342 GCA_005502385.1_00342_gene,GCA_005502385.1_00342_mRNA GCA_005502385.1_00342 putative protein YdhK GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MIKKLFFMILGSLLILSACSNNDEKDKDTNDQKSESHMKHNDESKVPEDMTSTNEGEFKVGDKVTITAGHMPGMKGAEATVKGAYKTYAYVVSYKPTNGNEKVNNHKWVVNEEIKDAPKDGFSKGDTVKLEANHMSGMKGATANIDNVKKTTVYVVDYKSKDNGKIIKNHKWMTGNELKAR persistent 181 DUF1541 domain-containing protein WP_002488449.1 UPI00024E1627 UniRef100_A0A6N0I4M5,UniRef50_A0A0B5KSV7,UniRef90_A0A0B5KSV7 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 34139 34606 . - . GCA_005502385.1_00343_gene GCA_005502385.1_00343 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNDKTVYDVIDIGVNHLLSVYDNWNVERVLDKENDVFPNTLHWQFGHVLTIFDSALSIGDQNAVDIAKYTKLFGYGSSPANWEGQDVPSIETIKENLKTLPERARKLTDEQLSQELNEPVAGCQTLNELLVLNAFHVPLHAGKIEEMTRVLKHDE . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 34139 34606 . - . GCA_005502385.1_00343_mRNA GCA_005502385.1_00343 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNDKTVYDVIDIGVNHLLSVYDNWNVERVLDKENDVFPNTLHWQFGHVLTIFDSALSIGDQNAVDIAKYTKLFGYGSSPANWEGQDVPSIETIKENLKTLPERARKLTDEQLSQELNEPVAGCQTLNELLVLNAFHVPLHAGKIEEMTRVLKHDE . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 34139 34606 . - 0 GCA_005502385.1_00343 GCA_005502385.1_00343_gene,GCA_005502385.1_00343_mRNA GCA_005502385.1_00343 hypothetical protein GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNDKTVYDVIDIGVNHLLSVYDNWNVERVLDKENDVFPNTLHWQFGHVLTIFDSALSIGDQNAVDIAKYTKLFGYGSSPANWEGQDVPSIETIKENLKTLPERARKLTDEQLSQELNEPVAGCQTLNELLVLNAFHVPLHAGKIEEMTRVLKHDE shell 155 bstA bacillithiol transferase BstA WP_049437722.1 UPI00066D316C UniRef100_UPI00066D316C,UniRef50_Q2FUS3,UniRef90_A0A6N0I2L4 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 35158 36309 . - . GCA_005502385.1_00344_gene GCA_005502385.1_00344 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKAVTYQGHKNMEVREVNDPTIEESTDAIIKITASGICGSDLHLYHQGDLFMDPGFVIGHEPMGIVEEVGKDVKTLKKGDRVVIPFNIGCGDCFYCNNHMESQCDNSNPSPANWKMDNGGLFGFGAMHGNHWGGQAEYLRVPFADFSSFKVPDSDLKDEQVLFLSDVVPTAYWSVEHAGVKSGDTVIVLGCGPIGLMAQKFAKLKGAERVIAIDNVEHRLNHAKKFNGAEVYNFSKEDNIGKLLRENTRGGADVVIDCVGMDGQVAQDDLEISSNSAQRGNISPIITAAESVRKFGTIQLTGIYATPADNFPVDLIFNRDVQVKSGQAPVIHQMPKLYEMIKNEVFDPTEIITHTMPLEEAKQAYDIFDQKKDNNIKVILKPQ . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 35158 36309 . - . GCA_005502385.1_00344_mRNA GCA_005502385.1_00344 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKAVTYQGHKNMEVREVNDPTIEESTDAIIKITASGICGSDLHLYHQGDLFMDPGFVIGHEPMGIVEEVGKDVKTLKKGDRVVIPFNIGCGDCFYCNNHMESQCDNSNPSPANWKMDNGGLFGFGAMHGNHWGGQAEYLRVPFADFSSFKVPDSDLKDEQVLFLSDVVPTAYWSVEHAGVKSGDTVIVLGCGPIGLMAQKFAKLKGAERVIAIDNVEHRLNHAKKFNGAEVYNFSKEDNIGKLLRENTRGGADVVIDCVGMDGQVAQDDLEISSNSAQRGNISPIITAAESVRKFGTIQLTGIYATPADNFPVDLIFNRDVQVKSGQAPVIHQMPKLYEMIKNEVFDPTEIITHTMPLEEAKQAYDIFDQKKDNNIKVILKPQ . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 35158 36309 . - 0 GCA_005502385.1_00344 GCA_005502385.1_00344_gene,GCA_005502385.1_00344_mRNA GCA_005502385.1_00344 putative zinc-binding alcohol dehydrogenase GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKAVTYQGHKNMEVREVNDPTIEESTDAIIKITASGICGSDLHLYHQGDLFMDPGFVIGHEPMGIVEEVGKDVKTLKKGDRVVIPFNIGCGDCFYCNNHMESQCDNSNPSPANWKMDNGGLFGFGAMHGNHWGGQAEYLRVPFADFSSFKVPDSDLKDEQVLFLSDVVPTAYWSVEHAGVKSGDTVIVLGCGPIGLMAQKFAKLKGAERVIAIDNVEHRLNHAKKFNGAEVYNFSKEDNIGKLLRENTRGGADVVIDCVGMDGQVAQDDLEISSNSAQRGNISPIITAAESVRKFGTIQLTGIYATPADNFPVDLIFNRDVQVKSGQAPVIHQMPKLYEMIKNEVFDPTEIITHTMPLEEAKQAYDIFDQKKDNNIKVILKPQ shell 383 tdh Alcohol dehydrogenase COG1063,ER WP_070468496.1 UPI0008A50338 UniRef100_UPI0008A50338,UniRef50_O06012,UniRef90_A0A380BVB2 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 36999 37538 . - . GCA_005502385.1_00345_gene GCA_005502385.1_00345 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNELTQYLKEVAKQLEIQNAYNELNRANQNNENQATDKFNDTLKAIEDKYAYDSSRRVTPNRASLKTLNRVKAIEDKYAKAMRTLERLRKSRLSRNNKNSTQIENLIKQSENGFNDYHTRDDQYNFATSVAQELEKLKNEYIISPKEAKNIFGKYVFHTNEFHLSDHELYKIKFAYGLD . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 36999 37538 . - . GCA_005502385.1_00345_mRNA GCA_005502385.1_00345 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNELTQYLKEVAKQLEIQNAYNELNRANQNNENQATDKFNDTLKAIEDKYAYDSSRRVTPNRASLKTLNRVKAIEDKYAKAMRTLERLRKSRLSRNNKNSTQIENLIKQSENGFNDYHTRDDQYNFATSVAQELEKLKNEYIISPKEAKNIFGKYVFHTNEFHLSDHELYKIKFAYGLD . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 36999 37538 . - 0 GCA_005502385.1_00345 GCA_005502385.1_00345_gene,GCA_005502385.1_00345_mRNA GCA_005502385.1_00345 hypothetical protein GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNELTQYLKEVAKQLEIQNAYNELNRANQNNENQATDKFNDTLKAIEDKYAYDSSRRVTPNRASLKTLNRVKAIEDKYAKAMRTLERLRKSRLSRNNKNSTQIENLIKQSENGFNDYHTRDDQYNFATSVAQELEKLKNEYIISPKEAKNIFGKYVFHTNEFHLSDHELYKIKFAYGLD shell 179 hypothetical protein WP_101804360.1 UPI000C7A0C93 UniRef100_UPI000C7A0C93,UniRef50_A0AAE5MYS3,UniRef90_A0AAE5MYS3 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 37855 38895 . - . GCA_005502385.1_00346_gene GCA_005502385.1_00346 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNVKARAVNGPDSEFFATEIKRRDLDKHDVLIEIKYAGICHSDIHTAREEWGPVDYPLVPGHEIAGIVKEVGPDVTKYKVGDRVGVGCMVDSCGECENCKNDEEQYCLNGNVGTYASTDKYGEKTQGGYSTHIVVQEDFVLRIPDNISLEVAAPLLCAGITTYSPLNHWKAYEGKKNVAIIGMGGLGHMAVQIAHAMGANVTVLSRTLNKKEDGLKFGASAYYATSDESTFKELAGSFDLIINTVSAKLEIDDYLKLLALDGTLVNVGAPAEPVSLQVFNLIGHRRSFAGSAIGGIKETQDMLDFCSKHHIAPQIELITADDIDDAYERVLASKVKYRFVIDISTM . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 37855 38895 . - . GCA_005502385.1_00346_mRNA GCA_005502385.1_00346 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNVKARAVNGPDSEFFATEIKRRDLDKHDVLIEIKYAGICHSDIHTAREEWGPVDYPLVPGHEIAGIVKEVGPDVTKYKVGDRVGVGCMVDSCGECENCKNDEEQYCLNGNVGTYASTDKYGEKTQGGYSTHIVVQEDFVLRIPDNISLEVAAPLLCAGITTYSPLNHWKAYEGKKNVAIIGMGGLGHMAVQIAHAMGANVTVLSRTLNKKEDGLKFGASAYYATSDESTFKELAGSFDLIINTVSAKLEIDDYLKLLALDGTLVNVGAPAEPVSLQVFNLIGHRRSFAGSAIGGIKETQDMLDFCSKHHIAPQIELITADDIDDAYERVLASKVKYRFVIDISTM . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 37855 38895 . - 0 GCA_005502385.1_00346 GCA_005502385.1_00346_gene,GCA_005502385.1_00346_mRNA GCA_005502385.1_00346 putative formaldehyde dehydrogenase AdhA GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNVKARAVNGPDSEFFATEIKRRDLDKHDVLIEIKYAGICHSDIHTAREEWGPVDYPLVPGHEIAGIVKEVGPDVTKYKVGDRVGVGCMVDSCGECENCKNDEEQYCLNGNVGTYASTDKYGEKTQGGYSTHIVVQEDFVLRIPDNISLEVAAPLLCAGITTYSPLNHWKAYEGKKNVAIIGMGGLGHMAVQIAHAMGANVTVLSRTLNKKEDGLKFGASAYYATSDESTFKELAGSFDLIINTVSAKLEIDDYLKLLALDGTLVNVGAPAEPVSLQVFNLIGHRRSFAGSAIGGIKETQDMLDFCSKHHIAPQIELITADDIDDAYERVLASKVKYRFVIDISTM shell 346 NAD(P)-dependent alcohol dehydrogenase UniRef50_P0CH36,UniRef90_A0A6N0I2U0 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 39182 39823 . + . GCA_005502385.1_00347_gene GCA_005502385.1_00347 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNIGIIGATGKLGTKVLDEAQQRGHEVTAIVRNVAKLDADKDVKVIEKDVFDLTSDDIKDLDVVVNAFGAPLGEEEVHVEVGRILINILKDEDTRAIIVGGAGSLFADDAHTIRVMDTPDFPEIVKPTAKGSSRNLQDLQHAEGITWTFISPSAEFDFEGKRTGTYTLGKDQLLFNSKGNSYISYADFAIAIVDEAENKAHINERFTVVGEEE . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 39182 39823 . + . GCA_005502385.1_00347_mRNA GCA_005502385.1_00347 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNIGIIGATGKLGTKVLDEAQQRGHEVTAIVRNVAKLDADKDVKVIEKDVFDLTSDDIKDLDVVVNAFGAPLGEEEVHVEVGRILINILKDEDTRAIIVGGAGSLFADDAHTIRVMDTPDFPEIVKPTAKGSSRNLQDLQHAEGITWTFISPSAEFDFEGKRTGTYTLGKDQLLFNSKGNSYISYADFAIAIVDEAENKAHINERFTVVGEEE . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 39182 39823 . + 0 GCA_005502385.1_00347 GCA_005502385.1_00347_gene,GCA_005502385.1_00347_mRNA GCA_005502385.1_00347 hypothetical protein GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNIGIIGATGKLGTKVLDEAQQRGHEVTAIVRNVAKLDADKDVKVIEKDVFDLTSDDIKDLDVVVNAFGAPLGEEEVHVEVGRILINILKDEDTRAIIVGGAGSLFADDAHTIRVMDTPDFPEIVKPTAKGSSRNLQDLQHAEGITWTFISPSAEFDFEGKRTGTYTLGKDQLLFNSKGNSYISYADFAIAIVDEAENKAHINERFTVVGEEE shell 213 NAD(P)-binding domain-containing protein WP_101804362.1 UPI000C7BE9C1 UniRef100_UPI000C7BE9C1,UniRef50_P71037,UniRef90_A0A974KXB5 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 40084 40575 . + . GCA_005502385.1_00348_gene GCA_005502385.1_00348 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MINIKKVTRIVLPLAGGMVIGRLTAKAQNDYKHYEKPPFSPPAKVFPIVWPLLYTSMGVAYQLSYAHAAHKREKQSITRAHYAQLGLNYAWTILYFNLKLRKTSLIESYVLLAAGNITAHRFYVSNKYAGLLMLPYVIWLSYASYLNGGNLILNEDKPGYTRD . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 40084 40575 . + . GCA_005502385.1_00348_mRNA GCA_005502385.1_00348 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MINIKKVTRIVLPLAGGMVIGRLTAKAQNDYKHYEKPPFSPPAKVFPIVWPLLYTSMGVAYQLSYAHAAHKREKQSITRAHYAQLGLNYAWTILYFNLKLRKTSLIESYVLLAAGNITAHRFYVSNKYAGLLMLPYVIWLSYASYLNGGNLILNEDKPGYTRD . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 40084 40575 . + 0 GCA_005502385.1_00348 GCA_005502385.1_00348_gene,GCA_005502385.1_00348_mRNA GCA_005502385.1_00348 Tryptophan-rich sensory protein GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MINIKKVTRIVLPLAGGMVIGRLTAKAQNDYKHYEKPPFSPPAKVFPIVWPLLYTSMGVAYQLSYAHAAHKREKQSITRAHYAQLGLNYAWTILYFNLKLRKTSLIESYVLLAAGNITAHRFYVSNKYAGLLMLPYVIWLSYASYLNGGNLILNEDKPGYTRD shell 163 Tryptophan-rich sensory protein WP_101804363.1 UPI000C7BF9DF UniRef100_UPI000C7BF9DF,UniRef50_B9E938,UniRef90_A0A974KX83 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 40718 40918 . - . GCA_005502385.1_00349_gene GCA_005502385.1_00349 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNNGTVKWFNAEKGFGFIEREDGDDVFVHFSGIATDGYKTLEEGQKVEFDITEGQRGEQATNVVPV . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 40718 40918 . - . GCA_005502385.1_00349_mRNA GCA_005502385.1_00349 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNNGTVKWFNAEKGFGFIEREDGDDVFVHFSGIATDGYKTLEEGQKVEFDITEGQRGEQATNVVPV . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 40718 40918 . - 0 GCA_005502385.1_00349 GCA_005502385.1_00349_gene,GCA_005502385.1_00349_mRNA GCA_005502385.1_00349 Cold shock protein CspC GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MNNGTVKWFNAEKGFGFIEREDGDDVFVHFSGIATDGYKTLEEGQKVEFDITEGQRGEQATNVVPV persistent 66 cspC Cold shock protein CspA COG1278,K WP_017174716.1 UPI00031A7B81 UniRef100_A0A1L8Y5F5,UniRef50_Q5HQT1,UniRef90_A0A7Z1N5T7 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 41222 42628 . - . GCA_005502385.1_00350_gene GCA_005502385.1_00350 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKVIKSKEINHRPKVSVLISTYNKEKFINKTLDSVLKQSMDMRDFELIVVDDCSTDQTVDIVSKKIDSFSNYKFIQLDQNSGTPAKPRNLSIDLSKGKYIMFIDGDDWLPEDALEKLYTLLKTNKTDYATGLTKYVHSDRIARSGVALSKIAYNKVDLKHFRKSFYHLAPAGRMIKASVIKKNHIQFPEMIFGEDLQFFAEVFFNTKRISTTQDVVYCANRYDDNISLVKSEKSTHINRMKWQGEAYRHLMSKYKNNKLMPNLLYRIINKDVLEAKFYKKGFIKNINELLPIFQNIIHMVDEHFDALDYADDDLNRQAIKLIREGNKEDIISFVKFYLKKDDKPLHEKNDIYYYSFKGTHYKKRMHPTLLKISQENDKVFLKILSKNSELKYLEVKHRKDPTQFIVLDIKKHRFKSGEYTVQFTTKNLPDGKLALTVLDKDLNGSVIKSGMRVDFYETVGGNLGYIKK . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 41222 42628 . - . GCA_005502385.1_00350_mRNA GCA_005502385.1_00350 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKVIKSKEINHRPKVSVLISTYNKEKFINKTLDSVLKQSMDMRDFELIVVDDCSTDQTVDIVSKKIDSFSNYKFIQLDQNSGTPAKPRNLSIDLSKGKYIMFIDGDDWLPEDALEKLYTLLKTNKTDYATGLTKYVHSDRIARSGVALSKIAYNKVDLKHFRKSFYHLAPAGRMIKASVIKKNHIQFPEMIFGEDLQFFAEVFFNTKRISTTQDVVYCANRYDDNISLVKSEKSTHINRMKWQGEAYRHLMSKYKNNKLMPNLLYRIINKDVLEAKFYKKGFIKNINELLPIFQNIIHMVDEHFDALDYADDDLNRQAIKLIREGNKEDIISFVKFYLKKDDKPLHEKNDIYYYSFKGTHYKKRMHPTLLKISQENDKVFLKILSKNSELKYLEVKHRKDPTQFIVLDIKKHRFKSGEYTVQFTTKNLPDGKLALTVLDKDLNGSVIKSGMRVDFYETVGGNLGYIKK . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 41222 42628 . - 0 GCA_005502385.1_00350 GCA_005502385.1_00350_gene,GCA_005502385.1_00350_mRNA GCA_005502385.1_00350 hypothetical protein GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKVIKSKEINHRPKVSVLISTYNKEKFINKTLDSVLKQSMDMRDFELIVVDDCSTDQTVDIVSKKIDSFSNYKFIQLDQNSGTPAKPRNLSIDLSKGKYIMFIDGDDWLPEDALEKLYTLLKTNKTDYATGLTKYVHSDRIARSGVALSKIAYNKVDLKHFRKSFYHLAPAGRMIKASVIKKNHIQFPEMIFGEDLQFFAEVFFNTKRISTTQDVVYCANRYDDNISLVKSEKSTHINRMKWQGEAYRHLMSKYKNNKLMPNLLYRIINKDVLEAKFYKKGFIKNINELLPIFQNIIHMVDEHFDALDYADDDLNRQAIKLIREGNKEDIISFVKFYLKKDDKPLHEKNDIYYYSFKGTHYKKRMHPTLLKISQENDKVFLKILSKNSELKYLEVKHRKDPTQFIVLDIKKHRFKSGEYTVQFTTKNLPDGKLALTVLDKDLNGSVIKSGMRVDFYETVGGNLGYIKK persistent 468 Glycosyltransferase UniRef50_A0A380HHB5,UniRef90_A0A4V2KWX5 . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka gene 43046 44407 . + . GCA_005502385.1_00351_gene GCA_005502385.1_00351 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKDTDQIHTKDTEEQGITLPYLKKAVIFSITFGFFGVNMAFALQSAMMGRIFQTLGADPNNLGWFFILPPLAGMIVQPLIGYYSDRTWTRFGRRMPYLLIAGPIGAIVLVLLPNAGSFGFGYASLMALSFGAIMTLLMDLTSNACMQPYKMIIGDMVNEKQRDMAWSWQQIFSNLGGIIATLLPFLLTIMGMSNVAPKGEVPMTVKIAYYIAAAVLLIASIWTVLSVKEYEPKTYNYYHGISDDNRNEKLNLWQLLKTAPKQFWQISVVQFFNWFALMYLWTYSTGAIAKNVWNATDPSSAGYQAAGNWYGVLYCIQFLSSVIFGFVIAKSKPSQRKFWYSFGLIFGGLGLISMFFIHNQWLLIISFIFIGINNLTMNTQPFTLLTEAIDGENSGAYLGLFNTSICLPQIVASVVSFALFPLLGSSMPAMLLFAGIMMLLGAISVKFINAKFE . . . . . . . GCA_005502385.1|SCOV01000014.1 prokka mRNA 43046 44407 . + . GCA_005502385.1_00351_mRNA GCA_005502385.1_00351 GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKDTDQIHTKDTEEQGITLPYLKKAVIFSITFGFFGVNMAFALQSAMMGRIFQTLGADPNNLGWFFILPPLAGMIVQPLIGYYSDRTWTRFGRRMPYLLIAGPIGAIVLVLLPNAGSFGFGYASLMALSFGAIMTLLMDLTSNACMQPYKMIIGDMVNEKQRDMAWSWQQIFSNLGGIIATLLPFLLTIMGMSNVAPKGEVPMTVKIAYYIAAAVLLIASIWTVLSVKEYEPKTYNYYHGISDDNRNEKLNLWQLLKTAPKQFWQISVVQFFNWFALMYLWTYSTGAIAKNVWNATDPSSAGYQAAGNWYGVLYCIQFLSSVIFGFVIAKSKPSQRKFWYSFGLIFGGLGLISMFFIHNQWLLIISFIFIGINNLTMNTQPFTLLTEAIDGENSGAYLGLFNTSICLPQIVASVVSFALFPLLGSSMPAMLLFAGIMMLLGAISVKFINAKFE . . . . . . . GCA_005502385.1|SCOV01000014.1 Prodigal:002006 CDS 43046 44407 . + 0 GCA_005502385.1_00351 GCA_005502385.1_00351_gene,GCA_005502385.1_00351_mRNA GCA_005502385.1_00351 hypothetical protein GCA_005502385.1 SCOV01000014.1 GCA_005502385.1|SCOV01000014.1 GCA_005502385.1_SCOV01000014.1 MKDTDQIHTKDTEEQGITLPYLKKAVIFSITFGFFGVNMAFALQSAMMGRIFQTLGADPNNLGWFFILPPLAGMIVQPLIGYYSDRTWTRFGRRMPYLLIAGPIGAIVLVLLPNAGSFGFGYASLMALSFGAIMTLLMDLTSNACMQPYKMIIGDMVNEKQRDMAWSWQQIFSNLGGIIATLLPFLLTIMGMSNVAPKGEVPMTVKIAYYIAAAVLLIASIWTVLSVKEYEPKTYNYYHGISDDNRNEKLNLWQLLKTAPKQFWQISVVQFFNWFALMYLWTYSTGAIAKNVWNATDPSSAGYQAAGNWYGVLYCIQFLSSVIFGFVIAKSKPSQRKFWYSFGLIFGGLGLISMFFIHNQWLLIISFIFIGINNLTMNTQPFTLLTEAIDGENSGAYLGLFNTSICLPQIVASVVSFALFPLLGSSMPAMLLFAGIMMLLGAISVKFINAKFE persistent 453 melB Sugar transporter COG2211,G WP_017174718.1 UPI0002D4C214 UniRef100_A0A8X8KLF8,UniRef50_G2KUY0,UniRef90_A0A0H2VGT5 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 121 1662 . - . GCA_005502385.1_00352_gene GCA_005502385.1_00352 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MEMAKEQELILVLDFGSQYNQLITRRIREMGVYSELHDHEISIDEIKRMNPKGIILSGGPNSVYEEGSFTIDPEIYNLGIPVLGICYGMQLTTKLLGGKVERANEREYGKAIIKAKSDELFFGLPEEQTVWMSHSDKVIEIPEGFEVIADSPSTNYAAIEDKKRRIYGVQFHPEVRHTEYGNDLLRNFVRRVCNCTGEWTMENFIEIEIEKIRERVGNRKVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDMVMEQFGEGFDMNIIRVNAKERFMEKLKGVSDPEKKRKIIGNEFVYVFDDEAAKLTDVDFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIELGIPEHLVWRQPFPGPGLGIRVLGEITEDKLEIVRESDAILREVIREEGLEREIWQYFTVLPGIQSVGVMGDYRTYDHTVGIRAVTSIDGMTSDFARIDWEVLQKISSRIVNEVDHVNRVVYDITSKPPSTIEWE . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 121 1662 . - . GCA_005502385.1_00352_mRNA GCA_005502385.1_00352 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MEMAKEQELILVLDFGSQYNQLITRRIREMGVYSELHDHEISIDEIKRMNPKGIILSGGPNSVYEEGSFTIDPEIYNLGIPVLGICYGMQLTTKLLGGKVERANEREYGKAIIKAKSDELFFGLPEEQTVWMSHSDKVIEIPEGFEVIADSPSTNYAAIEDKKRRIYGVQFHPEVRHTEYGNDLLRNFVRRVCNCTGEWTMENFIEIEIEKIRERVGNRKVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDMVMEQFGEGFDMNIIRVNAKERFMEKLKGVSDPEKKRKIIGNEFVYVFDDEAAKLTDVDFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIELGIPEHLVWRQPFPGPGLGIRVLGEITEDKLEIVRESDAILREVIREEGLEREIWQYFTVLPGIQSVGVMGDYRTYDHTVGIRAVTSIDGMTSDFARIDWEVLQKISSRIVNEVDHVNRVVYDITSKPPSTIEWE . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 121 1662 . - 0 GCA_005502385.1_00352 GCA_005502385.1_00352_gene,GCA_005502385.1_00352_mRNA GCA_005502385.1_00352 GMP synthase [glutamine-hydrolyzing] GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MEMAKEQELILVLDFGSQYNQLITRRIREMGVYSELHDHEISIDEIKRMNPKGIILSGGPNSVYEEGSFTIDPEIYNLGIPVLGICYGMQLTTKLLGGKVERANEREYGKAIIKAKSDELFFGLPEEQTVWMSHSDKVIEIPEGFEVIADSPSTNYAAIEDKKRRIYGVQFHPEVRHTEYGNDLLRNFVRRVCNCTGEWTMENFIEIEIEKIRERVGNRKVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDMVMEQFGEGFDMNIIRVNAKERFMEKLKGVSDPEKKRKIIGNEFVYVFDDEAAKLTDVDFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIELGIPEHLVWRQPFPGPGLGIRVLGEITEDKLEIVRESDAILREVIREEGLEREIWQYFTVLPGIQSVGVMGDYRTYDHTVGIRAVTSIDGMTSDFARIDWEVLQKISSRIVNEVDHVNRVVYDITSKPPSTIEWE persistent 513 guaA glutamine-hydrolyzing GMP synthase 6.3.5.2 GO:0003921,GO:0003922,GO:0005524,GO:0005829,GO:0006177,GO:0016462 COG0519,F WP_017175183.1 UPI0002E97171 UniRef100_A0A4V2KX08,UniRef50_Q2G0Y6,UniRef90_Q2G0Y6 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 1809 3275 . - . GCA_005502385.1_00353_gene GCA_005502385.1_00353 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MWENKFAKESLTFDDVLLIPAASDVLPNDVDLSVELSDKIKLNIPVISAGMDTVTESKMAIAMARQGGLGVIHKNMGIEEQADEVQKVKRSENGVITNPFFLTPDESVYEAEALMGKYRISGVPIVKDEESRTLVGIITNRDLRFIEDFSIKISDVMTKENLITAPVGTTLDEAEAILQKHKIEKLPLVENGRLEGLITIKDIEKVLEFPHAAKDEHGRLLAAAAIGTSKDTEIRAQKLVEAGVDALIIDTAHGHSKGVIEQVKKMKDKYPDLTIIAGNVATAEATRALFEAGADVVKVGIGPGSICTTRVVAGVGVPQITAVYDCATEARKHGKAIIADGGIKFSGDIIKALAAGGHAVMLGSLLAGTEESPGATEVFQGRQYKVYRGMGSLGAMEKGSNDRYFQEDKSPRKFVPEGIEGRTAYKGPLQDTIYQLMGGVRAGMGYTGSPNLKVLREEAQFTRMGPAGLAESHPHNIQITKESPNYSF . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 1809 3275 . - . GCA_005502385.1_00353_mRNA GCA_005502385.1_00353 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MWENKFAKESLTFDDVLLIPAASDVLPNDVDLSVELSDKIKLNIPVISAGMDTVTESKMAIAMARQGGLGVIHKNMGIEEQADEVQKVKRSENGVITNPFFLTPDESVYEAEALMGKYRISGVPIVKDEESRTLVGIITNRDLRFIEDFSIKISDVMTKENLITAPVGTTLDEAEAILQKHKIEKLPLVENGRLEGLITIKDIEKVLEFPHAAKDEHGRLLAAAAIGTSKDTEIRAQKLVEAGVDALIIDTAHGHSKGVIEQVKKMKDKYPDLTIIAGNVATAEATRALFEAGADVVKVGIGPGSICTTRVVAGVGVPQITAVYDCATEARKHGKAIIADGGIKFSGDIIKALAAGGHAVMLGSLLAGTEESPGATEVFQGRQYKVYRGMGSLGAMEKGSNDRYFQEDKSPRKFVPEGIEGRTAYKGPLQDTIYQLMGGVRAGMGYTGSPNLKVLREEAQFTRMGPAGLAESHPHNIQITKESPNYSF . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 1809 3275 . - 0 GCA_005502385.1_00353 GCA_005502385.1_00353_gene,GCA_005502385.1_00353_mRNA GCA_005502385.1_00353 Inosine-5'-monophosphate dehydrogenase GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MWENKFAKESLTFDDVLLIPAASDVLPNDVDLSVELSDKIKLNIPVISAGMDTVTESKMAIAMARQGGLGVIHKNMGIEEQADEVQKVKRSENGVITNPFFLTPDESVYEAEALMGKYRISGVPIVKDEESRTLVGIITNRDLRFIEDFSIKISDVMTKENLITAPVGTTLDEAEAILQKHKIEKLPLVENGRLEGLITIKDIEKVLEFPHAAKDEHGRLLAAAAIGTSKDTEIRAQKLVEAGVDALIIDTAHGHSKGVIEQVKKMKDKYPDLTIIAGNVATAEATRALFEAGADVVKVGIGPGSICTTRVVAGVGVPQITAVYDCATEARKHGKAIIADGGIKFSGDIIKALAAGGHAVMLGSLLAGTEESPGATEVFQGRQYKVYRGMGSLGAMEKGSNDRYFQEDKSPRKFVPEGIEGRTAYKGPLQDTIYQLMGGVRAGMGYTGSPNLKVLREEAQFTRMGPAGLAESHPHNIQITKESPNYSF persistent 488 guaB IMP dehydrogenase 1.1.1.205 GO:0000166,GO:0003938,GO:0006164,GO:0006177,GO:0006183,GO:0046872 COG3448,T WP_017175182.1 UPI0003058EDF UniRef100_A0A3S7GU81,UniRef50_Q2G0Y7,UniRef90_Q4L385 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 3314 4582 . - . GCA_005502385.1_00354_gene GCA_005502385.1_00354 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MKNLILSVQHLLAMYAGAILVPIIVGTSLKFSPEEIAYLITVDIFMCGVATFLQANKITGTGLPIVLGCTFTAVAPMILIGQTKGLDVLYGSLFLSGILVVIIAPFFSYLVKFFPPVVTGSVVTIIGINLMPVAMNYLAGGQGAKDYGNPKNLILGGVTLIVILLLQRFTTGFLKSIAILIGLVIGTILASIFGLVNISQVGDAHWLGIPRPFRFSGFGFDFGATLVFTIVAIVSLIESTGVYHALSEITGRKLERKDFRKGYTAEGLAIILGSIFNSFPYTAYSQNVGLVSLSGAKKNKVIYGMVVLLLISGCIPKLGALANIIPLPVLGGAMIAMFGMVMAYGVSILGNIDFKNQNNLLIIAVSVGLGTGISAVPQAFKALGEQFAWLTQNGIVLGAISAIILNFFFNGIKYKQNDENVK . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 3314 4582 . - . GCA_005502385.1_00354_mRNA GCA_005502385.1_00354 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MKNLILSVQHLLAMYAGAILVPIIVGTSLKFSPEEIAYLITVDIFMCGVATFLQANKITGTGLPIVLGCTFTAVAPMILIGQTKGLDVLYGSLFLSGILVVIIAPFFSYLVKFFPPVVTGSVVTIIGINLMPVAMNYLAGGQGAKDYGNPKNLILGGVTLIVILLLQRFTTGFLKSIAILIGLVIGTILASIFGLVNISQVGDAHWLGIPRPFRFSGFGFDFGATLVFTIVAIVSLIESTGVYHALSEITGRKLERKDFRKGYTAEGLAIILGSIFNSFPYTAYSQNVGLVSLSGAKKNKVIYGMVVLLLISGCIPKLGALANIIPLPVLGGAMIAMFGMVMAYGVSILGNIDFKNQNNLLIIAVSVGLGTGISAVPQAFKALGEQFAWLTQNGIVLGAISAIILNFFFNGIKYKQNDENVK . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 3314 4582 . - 0 GCA_005502385.1_00354 GCA_005502385.1_00354_gene,GCA_005502385.1_00354_mRNA GCA_005502385.1_00354 Uric acid permease PucK GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MKNLILSVQHLLAMYAGAILVPIIVGTSLKFSPEEIAYLITVDIFMCGVATFLQANKITGTGLPIVLGCTFTAVAPMILIGQTKGLDVLYGSLFLSGILVVIIAPFFSYLVKFFPPVVTGSVVTIIGINLMPVAMNYLAGGQGAKDYGNPKNLILGGVTLIVILLLQRFTTGFLKSIAILIGLVIGTILASIFGLVNISQVGDAHWLGIPRPFRFSGFGFDFGATLVFTIVAIVSLIESTGVYHALSEITGRKLERKDFRKGYTAEGLAIILGSIFNSFPYTAYSQNVGLVSLSGAKKNKVIYGMVVLLLISGCIPKLGALANIIPLPVLGGAMIAMFGMVMAYGVSILGNIDFKNQNNLLIIAVSVGLGTGISAVPQAFKALGEQFAWLTQNGIVLGAISAIILNFFFNGIKYKQNDENVK persistent 422 uraA Xanthine permease COG2233,F WP_017175181.1 UPI00030B9F2A UniRef100_A0A8X8GJ17,UniRef50_P42086,UniRef90_Q5HRX3 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 4579 5160 . - . GCA_005502385.1_00355_gene GCA_005502385.1_00355 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MEALEQKVKEDGVVIDEKILKVDGFLNHQIDAKLMYEVGQTFYKQFKGKGITKILTIEASGIAPAIMAALHFDVPCLFAKKAKPSTLKDGFYSTDIHSFTKNKTSTVIVSEEFLGSEDKVLIIDDFLANGDASLGLYDIAQQAKAETVGIGIVVEKSFQDGRQRLEEAGLTVSSLCKVASLTGNKVTLLGEDE . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 4579 5160 . - . GCA_005502385.1_00355_mRNA GCA_005502385.1_00355 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MEALEQKVKEDGVVIDEKILKVDGFLNHQIDAKLMYEVGQTFYKQFKGKGITKILTIEASGIAPAIMAALHFDVPCLFAKKAKPSTLKDGFYSTDIHSFTKNKTSTVIVSEEFLGSEDKVLIIDDFLANGDASLGLYDIAQQAKAETVGIGIVVEKSFQDGRQRLEEAGLTVSSLCKVASLTGNKVTLLGEDE . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 4579 5160 . - 0 GCA_005502385.1_00355 GCA_005502385.1_00355_gene,GCA_005502385.1_00355_mRNA GCA_005502385.1_00355 Xanthine phosphoribosyltransferase GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MEALEQKVKEDGVVIDEKILKVDGFLNHQIDAKLMYEVGQTFYKQFKGKGITKILTIEASGIAPAIMAALHFDVPCLFAKKAKPSTLKDGFYSTDIHSFTKNKTSTVIVSEEFLGSEDKVLIIDDFLANGDASLGLYDIAQQAKAETVGIGIVVEKSFQDGRQRLEEAGLTVSSLCKVASLTGNKVTLLGEDE persistent 193 xpt xanthine phosphoribosyltransferase 2.4.2.22 GO:0000310,GO:0005737,GO:0006166,GO:0032265,GO:0043101,GO:0046110 COG0503,F WP_101804332.1 UPI000C7E52AF UniRef100_UPI000C7E52AF,UniRef50_P42085,UniRef90_Q4L383 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 5368 5470 . - . GCA_005502385.1_00356_gene GCA_005502385.1_00356 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 5368 5470 . - . GCA_005502385.1_00356_mRNA GCA_005502385.1_00356 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 . . . . . . . GCA_005502385.1|SCOV01000015.1 Infernal:001001 misc_RNA 5368 5470 81.2 - . GCA_005502385.1_00356 GCA_005502385.1_00356_gene,GCA_005502385.1_00356_mRNA GCA_005502385.1_00356 Purine GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 5684 6091 . + . GCA_005502385.1_00357_gene GCA_005502385.1_00357 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MPDITVIDNENQIYNVIEKKKAEGYSENEIFVISKSKLHLDDLHNSQVTLIATSGSFSDRMSRLLTGEDGEEAVLNNFKLSDNQAEQYKKDMLDGKFLVIARKDASSHNEVEKNNAAYEEVDITHYANESKGPKS . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 5684 6091 . + . GCA_005502385.1_00357_mRNA GCA_005502385.1_00357 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MPDITVIDNENQIYNVIEKKKAEGYSENEIFVISKSKLHLDDLHNSQVTLIATSGSFSDRMSRLLTGEDGEEAVLNNFKLSDNQAEQYKKDMLDGKFLVIARKDASSHNEVEKNNAAYEEVDITHYANESKGPKS . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 5684 6091 . + 0 GCA_005502385.1_00357 GCA_005502385.1_00357_gene,GCA_005502385.1_00357_mRNA GCA_005502385.1_00357 hypothetical protein UPF0355 protein SA0372 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MPDITVIDNENQIYNVIEKKKAEGYSENEIFVISKSKLHLDDLHNSQVTLIATSGSFSDRMSRLLTGEDGEEAVLNNFKLSDNQAEQYKKDMLDGKFLVIARKDASSHNEVEKNNAAYEEVDITHYANESKGPKS persistent 135 General stress protein 17M-like domain-containing protein WP_017175179.1 UPI0002F2D584 UniRef100_A0A8X8GPH3,UniRef50_Q4L382,UniRef90_A0A657M164 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 6307 6966 . + . GCA_005502385.1_00358_gene GCA_005502385.1_00358 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MKFHTIHSLEDAYYQKAVEFYNKQLDVDFFEDSIITKRSLQNNKTENDYVFIVGIEKENIISLATAHYEATTNSAFLVHLLAVVDSNYDEIISQTLNEVETHLNILSNKVHARDINFLMIEVPKLDNSILDNQLIKRRHHTLLENDFEQQYDIDYLHPNYTFEETPIRTDLFIKSNIELTKDIYPASVKSNYILKYVFANGISRDIIYPLLEKMNLRLP . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 6307 6966 . + . GCA_005502385.1_00358_mRNA GCA_005502385.1_00358 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MKFHTIHSLEDAYYQKAVEFYNKQLDVDFFEDSIITKRSLQNNKTENDYVFIVGIEKENIISLATAHYEATTNSAFLVHLLAVVDSNYDEIISQTLNEVETHLNILSNKVHARDINFLMIEVPKLDNSILDNQLIKRRHHTLLENDFEQQYDIDYLHPNYTFEETPIRTDLFIKSNIELTKDIYPASVKSNYILKYVFANGISRDIIYPLLEKMNLRLP . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 6307 6966 . + 0 GCA_005502385.1_00358 GCA_005502385.1_00358_gene,GCA_005502385.1_00358_mRNA GCA_005502385.1_00358 hypothetical protein GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MKFHTIHSLEDAYYQKAVEFYNKQLDVDFFEDSIITKRSLQNNKTENDYVFIVGIEKENIISLATAHYEATTNSAFLVHLLAVVDSNYDEIISQTLNEVETHLNILSNKVHARDINFLMIEVPKLDNSILDNQLIKRRHHTLLENDFEQQYDIDYLHPNYTFEETPIRTDLFIKSNIELTKDIYPASVKSNYILKYVFANGISRDIIYPLLEKMNLRLP persistent 219 N-acetyltransferase domain-containing protein WP_019834714.1 UPI00035CBD76 UniRef100_UPI00035CBD76,UniRef50_K9B354,UniRef90_A0A3S7GUV0 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 7095 7733 . + . GCA_005502385.1_00359_gene GCA_005502385.1_00359 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MLTKEFAQRVKLSEKQVRKIVQHLEERGYQLSKTEYRGREATDFKEEDIELFQDIAEKVKQTNSYDLAFEELEKEKDFLQVIVKEDQQQLPADQGVTQLVEDLRTEIQKMREERQMLGQMITQVHQQQNELKELQSQITEKLKANNESLAAIQTSQQAIQTAQKEQSDYTKNNLVKEINDNNQQAIDNLKEHQTYVSSSNEKKGFLARLFNL . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 7095 7733 . + . GCA_005502385.1_00359_mRNA GCA_005502385.1_00359 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MLTKEFAQRVKLSEKQVRKIVQHLEERGYQLSKTEYRGREATDFKEEDIELFQDIAEKVKQTNSYDLAFEELEKEKDFLQVIVKEDQQQLPADQGVTQLVEDLRTEIQKMREERQMLGQMITQVHQQQNELKELQSQITEKLKANNESLAAIQTSQQAIQTAQKEQSDYTKNNLVKEINDNNQQAIDNLKEHQTYVSSSNEKKGFLARLFNL . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 7095 7733 . + 0 GCA_005502385.1_00359 GCA_005502385.1_00359_gene,GCA_005502385.1_00359_mRNA GCA_005502385.1_00359 hypothetical protein GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MLTKEFAQRVKLSEKQVRKIVQHLEERGYQLSKTEYRGREATDFKEEDIELFQDIAEKVKQTNSYDLAFEELEKEKDFLQVIVKEDQQQLPADQGVTQLVEDLRTEIQKMREERQMLGQMITQVHQQQNELKELQSQITEKLKANNESLAAIQTSQQAIQTAQKEQSDYTKNNLVKEINDNNQQAIDNLKEHQTYVSSSNEKKGFLARLFNL persistent 212 DNA-binding protein UPI000302D021 UniRef100_A0A3S7GUT5,UniRef50_S2YDN8,UniRef90_A0A3S7GUT5 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 7949 9340 . + . GCA_005502385.1_00360_gene GCA_005502385.1_00360 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MGTLFSIINIVIMLIFIIGLFIMAKKHVSFPKRVFTALGLGIVYGIILHLIYGVNSKVLETTTDWFSIVGDGYVTLLQMIVMPLIFISIVSAFSKIQIGDKFAKIGSYIFMFLIGTVAIAAVVGIFYAIVFGLDASSIDLGSAEHARGNEISSEAKQLTANTLPQQILELLPSNPFLDFTGQRTTSTIAVVMFAIFVGFAYLRVARKQPDNGSLLKRGIDAVYALIMSIVTFVLRLTPYGIIAIMASTIATSDFAAIWTLGKFMIASYAALLTMYVIHLIILAIMGINPIRYVKKTLEVLIFAFTSRSSAGALPLNVQTQTQRLGVPEGIANFSASFGLSIGQNGCAGIYPAMLAIMVAPVAHVDIDIPFILTLIAVVVISSFGVAGVGGGATFASILVLSTLNLPVALAGVLISIEPIIDMGRTALNVNDSILAGTGTARLTGNLDKEKFNSNHYGELSTES . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 7949 9340 . + . GCA_005502385.1_00360_mRNA GCA_005502385.1_00360 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MGTLFSIINIVIMLIFIIGLFIMAKKHVSFPKRVFTALGLGIVYGIILHLIYGVNSKVLETTTDWFSIVGDGYVTLLQMIVMPLIFISIVSAFSKIQIGDKFAKIGSYIFMFLIGTVAIAAVVGIFYAIVFGLDASSIDLGSAEHARGNEISSEAKQLTANTLPQQILELLPSNPFLDFTGQRTTSTIAVVMFAIFVGFAYLRVARKQPDNGSLLKRGIDAVYALIMSIVTFVLRLTPYGIIAIMASTIATSDFAAIWTLGKFMIASYAALLTMYVIHLIILAIMGINPIRYVKKTLEVLIFAFTSRSSAGALPLNVQTQTQRLGVPEGIANFSASFGLSIGQNGCAGIYPAMLAIMVAPVAHVDIDIPFILTLIAVVVISSFGVAGVGGGATFASILVLSTLNLPVALAGVLISIEPIIDMGRTALNVNDSILAGTGTARLTGNLDKEKFNSNHYGELSTES . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 7949 9340 . + 0 GCA_005502385.1_00360 GCA_005502385.1_00360_gene,GCA_005502385.1_00360_mRNA GCA_005502385.1_00360 L-cystine uptake protein TcyP GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MGTLFSIINIVIMLIFIIGLFIMAKKHVSFPKRVFTALGLGIVYGIILHLIYGVNSKVLETTTDWFSIVGDGYVTLLQMIVMPLIFISIVSAFSKIQIGDKFAKIGSYIFMFLIGTVAIAAVVGIFYAIVFGLDASSIDLGSAEHARGNEISSEAKQLTANTLPQQILELLPSNPFLDFTGQRTTSTIAVVMFAIFVGFAYLRVARKQPDNGSLLKRGIDAVYALIMSIVTFVLRLTPYGIIAIMASTIATSDFAAIWTLGKFMIASYAALLTMYVIHLIILAIMGINPIRYVKKTLEVLIFAFTSRSSAGALPLNVQTQTQRLGVPEGIANFSASFGLSIGQNGCAGIYPAMLAIMVAPVAHVDIDIPFILTLIAVVVISSFGVAGVGGGATFASILVLSTLNLPVALAGVLISIEPIIDMGRTALNVNDSILAGTGTARLTGNLDKEKFNSNHYGELSTES persistent 463 tcyP L-cystine uptake protein TcyP COG1823,E UniRef50_P54596,UniRef90_A0A2A1KAR9 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 9397 10152 . - . GCA_005502385.1_00361_gene GCA_005502385.1_00361 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MSDYVYELAKKHHSVRKFKDQPLSEDVVRKLVEAGQSASTSSYLQTYSIIGVEDPEIKAELKEVSGQHYVVDNGYLFVFVLDYYRHSLINEDVEQHMETSFESAEGLLVGAIDVALVSENIALAAEDMGYGIVYLGSLRNDVGRVREILDLPEYAFPLFGMAIGEPAEDENGSPKPRLPFGHVFHKNVYNSNKAQQKETLNAYDQMVSKYYQDRTNGVRNETWSQQVAGFLSGKARLDMLEQLNKSGLMKR . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 9397 10152 . - . GCA_005502385.1_00361_mRNA GCA_005502385.1_00361 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MSDYVYELAKKHHSVRKFKDQPLSEDVVRKLVEAGQSASTSSYLQTYSIIGVEDPEIKAELKEVSGQHYVVDNGYLFVFVLDYYRHSLINEDVEQHMETSFESAEGLLVGAIDVALVSENIALAAEDMGYGIVYLGSLRNDVGRVREILDLPEYAFPLFGMAIGEPAEDENGSPKPRLPFGHVFHKNVYNSNKAQQKETLNAYDQMVSKYYQDRTNGVRNETWSQQVAGFLSGKARLDMLEQLNKSGLMKR . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 9397 10152 . - 0 GCA_005502385.1_00361 GCA_005502385.1_00361_gene,GCA_005502385.1_00361_mRNA GCA_005502385.1_00361 NADPH-dependent oxidoreductase GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MSDYVYELAKKHHSVRKFKDQPLSEDVVRKLVEAGQSASTSSYLQTYSIIGVEDPEIKAELKEVSGQHYVVDNGYLFVFVLDYYRHSLINEDVEQHMETSFESAEGLLVGAIDVALVSENIALAAEDMGYGIVYLGSLRNDVGRVREILDLPEYAFPLFGMAIGEPAEDENGSPKPRLPFGHVFHKNVYNSNKAQQKETLNAYDQMVSKYYQDRTNGVRNETWSQQVAGFLSGKARLDMLEQLNKSGLMKR persistent 251 NADPH-dependent oxidoreductase WP_048762491.1 UPI00065FFA1F UniRef100_UPI00065FFA1F,UniRef50_Q2G0Z5,UniRef90_A0A3S7GUW5 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 10308 11087 . + . GCA_005502385.1_00362_gene GCA_005502385.1_00362 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MTHANKEVSTALYQAFTSKKPIDFISSSFELNELEAYHTQDDLINQLKNKQKSEIKGYKVSMTSAATQAIANTNEPAYGTILSTQVVEGGNSISLSTLFDPLLEPELIFELTADLPENADVQTILESVKVAPGIEIPDARYKDWFPNFALSDLISDNTATGLIVVGKRVTPLDYKSFADINLKLFKNDQEIETGHSSDVLGNPIESIKWLNKKLHSHGKRLEKGQFISSGTFISPLHLEKGIYIAEYEKVGSVKVEVKD . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 10308 11087 . + . GCA_005502385.1_00362_mRNA GCA_005502385.1_00362 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MTHANKEVSTALYQAFTSKKPIDFISSSFELNELEAYHTQDDLINQLKNKQKSEIKGYKVSMTSAATQAIANTNEPAYGTILSTQVVEGGNSISLSTLFDPLLEPELIFELTADLPENADVQTILESVKVAPGIEIPDARYKDWFPNFALSDLISDNTATGLIVVGKRVTPLDYKSFADINLKLFKNDQEIETGHSSDVLGNPIESIKWLNKKLHSHGKRLEKGQFISSGTFISPLHLEKGIYIAEYEKVGSVKVEVKD . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 10308 11087 . + 0 GCA_005502385.1_00362 GCA_005502385.1_00362_gene,GCA_005502385.1_00362_mRNA GCA_005502385.1_00362 2-oxo-hept-4-ene-1%2C7-dioate hydratase GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MTHANKEVSTALYQAFTSKKPIDFISSSFELNELEAYHTQDDLINQLKNKQKSEIKGYKVSMTSAATQAIANTNEPAYGTILSTQVVEGGNSISLSTLFDPLLEPELIFELTADLPENADVQTILESVKVAPGIEIPDARYKDWFPNFALSDLISDNTATGLIVVGKRVTPLDYKSFADINLKLFKNDQEIETGHSSDVLGNPIESIKWLNKKLHSHGKRLEKGQFISSGTFISPLHLEKGIYIAEYEKVGSVKVEVKD persistent 259 2-keto-4-pentenoate hydratase WP_017175680.1 UPI0002FD87D5 UniRef100_A0A8X8KIV3,UniRef50_A0A380G5W0,UniRef90_A0AAE5JL62 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 11490 12059 . + . GCA_005502385.1_00363_gene GCA_005502385.1_00363 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MSLINKEILPFTAQAYDPKNDEFKEVSQDDLKGSWSVVCFYPADFSFVCPTELEDLQNQYSQLQDLGVNVFSVSTDTHFVHKAWHDHSDAINKIQYTMIGDPSQIITRNFDVLDEEAGLAQRGTFIVDPDGVVQAAEINADGIGRDASTLVNKIKAAQYVRQHPGEVCPAKWEEGSESLQPGLDLVGKI . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 11490 12059 . + . GCA_005502385.1_00363_mRNA GCA_005502385.1_00363 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MSLINKEILPFTAQAYDPKNDEFKEVSQDDLKGSWSVVCFYPADFSFVCPTELEDLQNQYSQLQDLGVNVFSVSTDTHFVHKAWHDHSDAINKIQYTMIGDPSQIITRNFDVLDEEAGLAQRGTFIVDPDGVVQAAEINADGIGRDASTLVNKIKAAQYVRQHPGEVCPAKWEEGSESLQPGLDLVGKI . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 11490 12059 . + 0 GCA_005502385.1_00363 GCA_005502385.1_00363_gene,GCA_005502385.1_00363_mRNA GCA_005502385.1_00363 Alkyl hydroperoxide reductase C GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MSLINKEILPFTAQAYDPKNDEFKEVSQDDLKGSWSVVCFYPADFSFVCPTELEDLQNQYSQLQDLGVNVFSVSTDTHFVHKAWHDHSDAINKIQYTMIGDPSQIITRNFDVLDEEAGLAQRGTFIVDPDGVVQAAEINADGIGRDASTLVNKIKAAQYVRQHPGEVCPAKWEEGSESLQPGLDLVGKI persistent 189 ahpC alkyl hydroperoxide reductase subunit C 1.11.1.26 GO:0005829,GO:0006979,GO:0008379,GO:0033554,GO:0042744,GO:0045454,GO:0102039 COG0450,V WP_049434867.1 UPI00066BCF31 UniRef100_A0A974QNJ8,UniRef50_K0J4Q8,UniRef90_Q8CMQ2 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 12074 13597 . + . GCA_005502385.1_00364_gene GCA_005502385.1_00364 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MLNADLKQQLQQLLQLMEGDVEFRASIGSDDKSKELKDLLDEIAEMTDHITIVEKELKRTPSFQVSKPEEDTGITFAGIPLGHEFNSLVLAILQVSGRAPKEKQSIIDQIKGLEGNYNFETYVSLTCQKCPDVVQALNLMSVINPNITHTMIDGAVFREESKDILAVPAVFLDGEEFGNGRMTISDILSKLGSTQDASEYEDKDPYDVLIIGGGPASGSAAIYTARKGLRTGIVADRIGGQVNDTAGIENFITVKQTTGSEFSSNLAAHIEEYDIDAMTGIRATKIEKTDKAIQVTLENDAVLESKTAIISTGASWRKLNIPGEDRLINKGVAFCPHCDGPLFENKNVAVIGGGNSGVEAAIDLAGIVKHVTLFEFAPELKADTVLQERLRSFPNVDIHTNARTAEVLGEDHVTGLSYEDMSSGEMKELSLDGIFVQIGLVPNTKWIGDAVELNNRGEVVVDRENNTNVPGIFAAGDVTDQKYKQIIISMGSGANAALSAFDYIIRN . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 12074 13597 . + . GCA_005502385.1_00364_mRNA GCA_005502385.1_00364 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MLNADLKQQLQQLLQLMEGDVEFRASIGSDDKSKELKDLLDEIAEMTDHITIVEKELKRTPSFQVSKPEEDTGITFAGIPLGHEFNSLVLAILQVSGRAPKEKQSIIDQIKGLEGNYNFETYVSLTCQKCPDVVQALNLMSVINPNITHTMIDGAVFREESKDILAVPAVFLDGEEFGNGRMTISDILSKLGSTQDASEYEDKDPYDVLIIGGGPASGSAAIYTARKGLRTGIVADRIGGQVNDTAGIENFITVKQTTGSEFSSNLAAHIEEYDIDAMTGIRATKIEKTDKAIQVTLENDAVLESKTAIISTGASWRKLNIPGEDRLINKGVAFCPHCDGPLFENKNVAVIGGGNSGVEAAIDLAGIVKHVTLFEFAPELKADTVLQERLRSFPNVDIHTNARTAEVLGEDHVTGLSYEDMSSGEMKELSLDGIFVQIGLVPNTKWIGDAVELNNRGEVVVDRENNTNVPGIFAAGDVTDQKYKQIIISMGSGANAALSAFDYIIRN . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 12074 13597 . + 0 GCA_005502385.1_00364 GCA_005502385.1_00364_gene,GCA_005502385.1_00364_mRNA GCA_005502385.1_00364 Alkyl hydroperoxide reductase subunit F GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MLNADLKQQLQQLLQLMEGDVEFRASIGSDDKSKELKDLLDEIAEMTDHITIVEKELKRTPSFQVSKPEEDTGITFAGIPLGHEFNSLVLAILQVSGRAPKEKQSIIDQIKGLEGNYNFETYVSLTCQKCPDVVQALNLMSVINPNITHTMIDGAVFREESKDILAVPAVFLDGEEFGNGRMTISDILSKLGSTQDASEYEDKDPYDVLIIGGGPASGSAAIYTARKGLRTGIVADRIGGQVNDTAGIENFITVKQTTGSEFSSNLAAHIEEYDIDAMTGIRATKIEKTDKAIQVTLENDAVLESKTAIISTGASWRKLNIPGEDRLINKGVAFCPHCDGPLFENKNVAVIGGGNSGVEAAIDLAGIVKHVTLFEFAPELKADTVLQERLRSFPNVDIHTNARTAEVLGEDHVTGLSYEDMSSGEMKELSLDGIFVQIGLVPNTKWIGDAVELNNRGEVVVDRENNTNVPGIFAAGDVTDQKYKQIIISMGSGANAALSAFDYIIRN persistent 507 ahpF alkyl hydroperoxide reductase subunit F GO:0000302,GO:0008785,GO:0050660,GO:0051287 COG3634,V UniRef50_O05204,UniRef90_Q4L375 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 13846 14475 . + . GCA_005502385.1_00365_gene GCA_005502385.1_00365 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MKKSMIISSFLALLLILSACAPNNDNNEDNHNQSNGVNAPKHAKNLTENDIFTSNKSHQKLTEDEMNQAIKKYLDVNSDILDNKYIMQSQIDRQSSGQTKITDKQATKLSNLSNIAVKNDLHFKKYVENNTLPDGYKDHVNRIIKYFHALNSTIANVDESIEQLNYQPQNTINVVDVPTHYAGDVNGNQQNKIKSFLNKKDIKTDVFDK . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 13846 14475 . + . GCA_005502385.1_00365_mRNA GCA_005502385.1_00365 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MKKSMIISSFLALLLILSACAPNNDNNEDNHNQSNGVNAPKHAKNLTENDIFTSNKSHQKLTEDEMNQAIKKYLDVNSDILDNKYIMQSQIDRQSSGQTKITDKQATKLSNLSNIAVKNDLHFKKYVENNTLPDGYKDHVNRIIKYFHALNSTIANVDESIEQLNYQPQNTINVVDVPTHYAGDVNGNQQNKIKSFLNKKDIKTDVFDK . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 13846 14475 . + 0 GCA_005502385.1_00365 GCA_005502385.1_00365_gene,GCA_005502385.1_00365_mRNA GCA_005502385.1_00365 hypothetical protein GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MKKSMIISSFLALLLILSACAPNNDNNEDNHNQSNGVNAPKHAKNLTENDIFTSNKSHQKLTEDEMNQAIKKYLDVNSDILDNKYIMQSQIDRQSSGQTKITDKQATKLSNLSNIAVKNDLHFKKYVENNTLPDGYKDHVNRIIKYFHALNSTIANVDESIEQLNYQPQNTINVVDVPTHYAGDVNGNQQNKIKSFLNKKDIKTDVFDK persistent 209 NDxxF motif lipoprotein WP_017175678.1 UPI000311F3D6 UniRef100_A0A8X8GJF6,UniRef50_Q4L374,UniRef90_A0AAE5JLM9 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 14572 15150 . - . GCA_005502385.1_00366_gene GCA_005502385.1_00366 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MNLYLIRHGESQSNYDNKYNRAYYCGQLDVPLTERGIESAKNLKTYFYNIKIDDVYVSDLTRTKETYQYIFPYDIPTTVTSLLRERSLGLFEGQFKDKLMKNNKYHRYFHDSNYKDFRHSFIQKAPEGESYNDVYHRVKQFFETIHIQDNHTIVIIAHQVVIRCIMVYFGYINKEEALTKVIENCKPYLIEL . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 14572 15150 . - . GCA_005502385.1_00366_mRNA GCA_005502385.1_00366 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MNLYLIRHGESQSNYDNKYNRAYYCGQLDVPLTERGIESAKNLKTYFYNIKIDDVYVSDLTRTKETYQYIFPYDIPTTVTSLLRERSLGLFEGQFKDKLMKNNKYHRYFHDSNYKDFRHSFIQKAPEGESYNDVYHRVKQFFETIHIQDNHTIVIIAHQVVIRCIMVYFGYINKEEALTKVIENCKPYLIEL . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 14572 15150 . - 0 GCA_005502385.1_00366 GCA_005502385.1_00366_gene,GCA_005502385.1_00366_mRNA GCA_005502385.1_00366 Adenosylcobalamin/alpha-ribazole phosphatase GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MNLYLIRHGESQSNYDNKYNRAYYCGQLDVPLTERGIESAKNLKTYFYNIKIDDVYVSDLTRTKETYQYIFPYDIPTTVTSLLRERSLGLFEGQFKDKLMKNNKYHRYFHDSNYKDFRHSFIQKAPEGESYNDVYHRVKQFFETIHIQDNHTIVIIAHQVVIRCIMVYFGYINKEEALTKVIENCKPYLIEL persistent 192 phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) WP_017175677.1 UPI0002E740DD UniRef100_A0A8X8KFQ8,UniRef50_A0A380CV51,UniRef90_A0A6N0I318 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 15428 15676 . - . GCA_005502385.1_00367_gene GCA_005502385.1_00367 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MGFIIMIIVGGLIGWIAGMIMGKDIPGGILGNIIAGLIGSFIGSKLLGTWGPVWGGVPIFPALIGAIILIFIVSLILKAIKK . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 15428 15676 . - . GCA_005502385.1_00367_mRNA GCA_005502385.1_00367 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MGFIIMIIVGGLIGWIAGMIMGKDIPGGILGNIIAGLIGSFIGSKLLGTWGPVWGGVPIFPALIGAIILIFIVSLILKAIKK . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 15428 15676 . - 0 GCA_005502385.1_00367 GCA_005502385.1_00367_gene,GCA_005502385.1_00367_mRNA GCA_005502385.1_00367 hypothetical protein GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MGFIIMIIVGGLIGWIAGMIMGKDIPGGILGNIIAGLIGSFIGSKLLGTWGPVWGGVPIFPALIGAIILIFIVSLILKAIKK persistent 82 GlsB/YeaQ/YmgE family stress response membrane protein WP_002447983.1 UPI00019FC34E UniRef100_A0A1L8Y4A4,UniRef50_K8E352,UniRef90_A0A1L8Y4A4 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 15996 16253 . + . GCA_005502385.1_00368_gene GCA_005502385.1_00368 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MGSHALYNLRKKRHLEINELTEILNKKYGTHYEPHQLYEWENHQHEPKFKDAMILADYFNTSYQVLVESKYKEYQQQFDDVDIRL . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 15996 16253 . + . GCA_005502385.1_00368_mRNA GCA_005502385.1_00368 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MGSHALYNLRKKRHLEINELTEILNKKYGTHYEPHQLYEWENHQHEPKFKDAMILADYFNTSYQVLVESKYKEYQQQFDDVDIRL . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 15996 16253 . + 0 GCA_005502385.1_00368 GCA_005502385.1_00368_gene,GCA_005502385.1_00368_mRNA GCA_005502385.1_00368 hypothetical protein GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MGSHALYNLRKKRHLEINELTEILNKKYGTHYEPHQLYEWENHQHEPKFKDAMILADYFNTSYQVLVESKYKEYQQQFDDVDIRL shell 85 Helix-turn-helix domain-containing protein WP_048762493.1 UPI00066074C0 UniRef100_UPI00066074C0,UniRef50_Q2G104,UniRef90_A0A4Q9WPK6 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 16312 17262 . - . GCA_005502385.1_00369_gene GCA_005502385.1_00369 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MIMRGKYLLAGIVASTLLLGACDLNIHLPGGNNDSSEDKQKTEKSDNKNKTPNNSNKNNNTNNEKNIDSSDTQQNDNDENTNYNQTEDIQPNDNKSIQSSEQNTQNQSENGINGNNETTTNESHSTSDNQSNDSSNKELTPQQAEDVVYDWYKNQGFGHRLRNEFNYNPSKSTDDMYYIDYAASDAYGTGTPYVAIVDKHTGSIVDNYNNMTDEEKAKRKQMNESKLEQSNRQRNNDVQNNETKNNNETQHTSSNEENQNSAQSETQNDVQTSNQSENNHSTSTDASTQIKEEPTTSQMDRNEQAQPNHQSTNTEE . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 16312 17262 . - . GCA_005502385.1_00369_mRNA GCA_005502385.1_00369 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MIMRGKYLLAGIVASTLLLGACDLNIHLPGGNNDSSEDKQKTEKSDNKNKTPNNSNKNNNTNNEKNIDSSDTQQNDNDENTNYNQTEDIQPNDNKSIQSSEQNTQNQSENGINGNNETTTNESHSTSDNQSNDSSNKELTPQQAEDVVYDWYKNQGFGHRLRNEFNYNPSKSTDDMYYIDYAASDAYGTGTPYVAIVDKHTGSIVDNYNNMTDEEKAKRKQMNESKLEQSNRQRNNDVQNNETKNNNETQHTSSNEENQNSAQSETQNDVQTSNQSENNHSTSTDASTQIKEEPTTSQMDRNEQAQPNHQSTNTEE . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 16312 17262 . - 0 GCA_005502385.1_00369 GCA_005502385.1_00369_gene,GCA_005502385.1_00369_mRNA GCA_005502385.1_00369 hypothetical protein GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MIMRGKYLLAGIVASTLLLGACDLNIHLPGGNNDSSEDKQKTEKSDNKNKTPNNSNKNNNTNNEKNIDSSDTQQNDNDENTNYNQTEDIQPNDNKSIQSSEQNTQNQSENGINGNNETTTNESHSTSDNQSNDSSNKELTPQQAEDVVYDWYKNQGFGHRLRNEFNYNPSKSTDDMYYIDYAASDAYGTGTPYVAIVDKHTGSIVDNYNNMTDEEKAKRKQMNESKLEQSNRQRNNDVQNNETKNNNETQHTSSNEENQNSAQSETQNDVQTSNQSENNHSTSTDASTQIKEEPTTSQMDRNEQAQPNHQSTNTEE persistent 316 Lipoprotein UniRef50_A0AAE5JMI8,UniRef90_A0AAE5JMI8 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 17439 17681 . - . GCA_005502385.1_00370_gene GCA_005502385.1_00370 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MAGGPRRGGRRRKKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMALLPYVKDEN . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 17439 17681 . - . GCA_005502385.1_00370_mRNA GCA_005502385.1_00370 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MAGGPRRGGRRRKKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMALLPYVKDEN . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 17439 17681 . - 0 GCA_005502385.1_00370 GCA_005502385.1_00370_gene,GCA_005502385.1_00370_mRNA GCA_005502385.1_00370 30S ribosomal protein S18 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MAGGPRRGGRRRKKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMALLPYVKDEN persistent 80 rpsR 30S ribosomal protein S18 GO:0000314,GO:0003735,GO:0006412,GO:0022627,GO:0070181 COG0238,J WP_002447994.1 UPI000054BF8B UniRef100_Q4L342,UniRef50_P21475,UniRef90_Q2G111 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 17723 18238 . - . GCA_005502385.1_00371_gene GCA_005502385.1_00371 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MINRVVLVGRLTKDPEYRSTPSGVSVATFTLAVNRTFTNAQGEREADFINVVVFRRQAENVNNYLSKGSLAGVDGRIQSRSYENQEGRRIFVTEVVADSVQFLEPKNAQGGQRNQGNNDFQDYGQGFGGSQSGQNTSYNNNNNRASNNNQSDNPFANANGPIDISDDDLPF . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 17723 18238 . - . GCA_005502385.1_00371_mRNA GCA_005502385.1_00371 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MINRVVLVGRLTKDPEYRSTPSGVSVATFTLAVNRTFTNAQGEREADFINVVVFRRQAENVNNYLSKGSLAGVDGRIQSRSYENQEGRRIFVTEVVADSVQFLEPKNAQGGQRNQGNNDFQDYGQGFGGSQSGQNTSYNNNNNRASNNNQSDNPFANANGPIDISDDDLPF . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 17723 18238 . - 0 GCA_005502385.1_00371 GCA_005502385.1_00371_gene,GCA_005502385.1_00371_mRNA GCA_005502385.1_00371 Single-stranded DNA-binding protein A GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MINRVVLVGRLTKDPEYRSTPSGVSVATFTLAVNRTFTNAQGEREADFINVVVFRRQAENVNNYLSKGSLAGVDGRIQSRSYENQEGRRIFVTEVVADSVQFLEPKNAQGGQRNQGNNDFQDYGQGFGGSQSGQNTSYNNNNNRASNNNQSDNPFANANGPIDISDDDLPF persistent 171 ssb Single-stranded DNA-binding protein COG0629,L WP_048762494.1 UPI0006617DF0 UniRef100_UPI0006617DF0,UniRef50_A0A380G5F8,UniRef90_A0A380G5F8 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 18260 18556 . - . GCA_005502385.1_00372_gene GCA_005502385.1_00372 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MRTYEIMYVVRPNIEEDAKKAVVERFNGILASEGSEVLEEKDWGKRRLAYEIEDFKEGFYFIVRIKTDNNRATDEFQRLAKINDDIIRYIVIREDQDK . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 18260 18556 . - . GCA_005502385.1_00372_mRNA GCA_005502385.1_00372 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MRTYEIMYVVRPNIEEDAKKAVVERFNGILASEGSEVLEEKDWGKRRLAYEIEDFKEGFYFIVRIKTDNNRATDEFQRLAKINDDIIRYIVIREDQDK . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 18260 18556 . - 0 GCA_005502385.1_00372 GCA_005502385.1_00372_gene,GCA_005502385.1_00372_mRNA GCA_005502385.1_00372 30S ribosomal protein S6 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MRTYEIMYVVRPNIEEDAKKAVVERFNGILASEGSEVLEEKDWGKRRLAYEIEDFKEGFYFIVRIKTDNNRATDEFQRLAKINDDIIRYIVIREDQDK persistent 98 rpsF 30S ribosomal protein S6 GO:0000314,GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0022627,GO:0070181,GO:1990904 COG0360,J WP_002447961.1 UPI00019FC351 UniRef100_A0A8I1BDQ8,UniRef50_P21468,UniRef90_Q5HRZ5 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 18805 18996 . + . GCA_005502385.1_00373_gene GCA_005502385.1_00373 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MQLDLDWNKEFQEFQEILNCGITPEWLYCAKANMILEPAYTGEGKQFFSTKDIIKASKIIPFF . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 18805 18996 . + . GCA_005502385.1_00373_mRNA GCA_005502385.1_00373 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MQLDLDWNKEFQEFQEILNCGITPEWLYCAKANMILEPAYTGEGKQFFSTKDIIKASKIIPFF . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 18805 18996 . + 0 GCA_005502385.1_00373 GCA_005502385.1_00373_gene,GCA_005502385.1_00373_mRNA GCA_005502385.1_00373 hypothetical protein GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MQLDLDWNKEFQEFQEILNCGITPEWLYCAKANMILEPAYTGEGKQFFSTKDIIKASKIIPFF persistent 63 Phage protein WP_048762495.1 UPI00065FAFA2 UniRef100_UPI00065FAFA2,UniRef50_A0A380G4L3,UniRef90_A0A380G4L3 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 19065 20162 . - . GCA_005502385.1_00374_gene GCA_005502385.1_00374 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MALTAGIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDTRLNKLTEMVEPKKTIPTTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDDICQVVRAFDDENVTHVAGRVNPLDDIEVINMELVLADLESVEKRLPRIEKMARQKDKTAEMEFRILSRIKEALEEGNPVRSLDFNEEDQKYVNQAQLLTSKKMLYIANVGEDEIGDDENDKVKTIREYAAKEDSEVIVISAKIEEEIATLDDEDKEMFLEDLGIEEPGLDRLIRTTYDLLGLSTYFTAGVQEVRAWTFRQGMTAPQCAGIIHTDFERGFIRAEVTSYDDYVEHGGEQGAKEAGKQRLEGKDYIMKDGDIVHFRFNV . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 19065 20162 . - . GCA_005502385.1_00374_mRNA GCA_005502385.1_00374 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MALTAGIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDTRLNKLTEMVEPKKTIPTTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDDICQVVRAFDDENVTHVAGRVNPLDDIEVINMELVLADLESVEKRLPRIEKMARQKDKTAEMEFRILSRIKEALEEGNPVRSLDFNEEDQKYVNQAQLLTSKKMLYIANVGEDEIGDDENDKVKTIREYAAKEDSEVIVISAKIEEEIATLDDEDKEMFLEDLGIEEPGLDRLIRTTYDLLGLSTYFTAGVQEVRAWTFRQGMTAPQCAGIIHTDFERGFIRAEVTSYDDYVEHGGEQGAKEAGKQRLEGKDYIMKDGDIVHFRFNV . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 19065 20162 . - 0 GCA_005502385.1_00374 GCA_005502385.1_00374_gene,GCA_005502385.1_00374_mRNA GCA_005502385.1_00374 Ribosome-binding ATPase YchF GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MALTAGIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDTRLNKLTEMVEPKKTIPTTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDDICQVVRAFDDENVTHVAGRVNPLDDIEVINMELVLADLESVEKRLPRIEKMARQKDKTAEMEFRILSRIKEALEEGNPVRSLDFNEEDQKYVNQAQLLTSKKMLYIANVGEDEIGDDENDKVKTIREYAAKEDSEVIVISAKIEEEIATLDDEDKEMFLEDLGIEEPGLDRLIRTTYDLLGLSTYFTAGVQEVRAWTFRQGMTAPQCAGIIHTDFERGFIRAEVTSYDDYVEHGGEQGAKEAGKQRLEGKDYIMKDGDIVHFRFNV persistent 365 ychF redox-regulated ATPase YchF GO:0005524,GO:0005525,GO:0016887 UniRef50_A0A090KX53,UniRef90_UPI0008A9E109 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 20174 20377 . - . GCA_005502385.1_00375_gene GCA_005502385.1_00375 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MTPKYDINDIVEMKKQHACGTNRFKIIRMGADIRIKCENCQRSIMIPRQVFDKKIKKILVSHQDTES . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 20174 20377 . - . GCA_005502385.1_00375_mRNA GCA_005502385.1_00375 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MTPKYDINDIVEMKKQHACGTNRFKIIRMGADIRIKCENCQRSIMIPRQVFDKKIKKILVSHQDTES . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 20174 20377 . - 0 GCA_005502385.1_00375 GCA_005502385.1_00375_gene,GCA_005502385.1_00375_mRNA GCA_005502385.1_00375 hypothetical protein GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MTPKYDINDIVEMKKQHACGTNRFKIIRMGADIRIKCENCQRSIMIPRQVFDKKIKKILVSHQDTES persistent 67 DUF951 domain-containing protein WP_048762499.1 UPI00065FF908 UniRef100_A0AAE5MZ17,UniRef50_Q2G116,UniRef90_A0A4Q9WNL9 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 20398 21276 . - . GCA_005502385.1_00376_gene GCA_005502385.1_00376 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MNQLKNVLTSLFKPLTEPEVYTNLATKLAMVIIYILVGLIVIGIINKAIEEAFKFQNKSNRGNKKRSKTLVSLIKNVVRYIVWFIVLTTVLSKFGISVNGIIASAGVVGIAVGFGAQTIVKDIITGFFIIFENQFDVGDYVKINSGGTTVAEGTVKSIGLRSTRINTITGELTILPNGSMGEITNYSITNGTSIVEIPVSVDENLDKVEKKLNKLFTAMRSKYYLFITDPVVLGIDGLDETKVIIRISAETIPGEGASGSRILRKEIQKMFVQEGIKLPQPMYVRSTDKQDA . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 20398 21276 . - . GCA_005502385.1_00376_mRNA GCA_005502385.1_00376 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MNQLKNVLTSLFKPLTEPEVYTNLATKLAMVIIYILVGLIVIGIINKAIEEAFKFQNKSNRGNKKRSKTLVSLIKNVVRYIVWFIVLTTVLSKFGISVNGIIASAGVVGIAVGFGAQTIVKDIITGFFIIFENQFDVGDYVKINSGGTTVAEGTVKSIGLRSTRINTITGELTILPNGSMGEITNYSITNGTSIVEIPVSVDENLDKVEKKLNKLFTAMRSKYYLFITDPVVLGIDGLDETKVIIRISAETIPGEGASGSRILRKEIQKMFVQEGIKLPQPMYVRSTDKQDA . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 20398 21276 . - 0 GCA_005502385.1_00376 GCA_005502385.1_00376_gene,GCA_005502385.1_00376_mRNA GCA_005502385.1_00376 Small-conductance mechanosensitive channel GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MNQLKNVLTSLFKPLTEPEVYTNLATKLAMVIIYILVGLIVIGIINKAIEEAFKFQNKSNRGNKKRSKTLVSLIKNVVRYIVWFIVLTTVLSKFGISVNGIIASAGVVGIAVGFGAQTIVKDIITGFFIIFENQFDVGDYVKINSGGTTVAEGTVKSIGLRSTRINTITGELTILPNGSMGEITNYSITNGTSIVEIPVSVDENLDKVEKKLNKLFTAMRSKYYLFITDPVVLGIDGLDETKVIIRISAETIPGEGASGSRILRKEIQKMFVQEGIKLPQPMYVRSTDKQDA persistent 292 Mechanosensitive ion channel family protein WP_048762501.1 UPI0006615CDC UniRef100_UPI0006615CDC,UniRef50_Q2G117,UniRef90_A0A3S7GYF6 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 21407 22231 . - . GCA_005502385.1_00377_gene GCA_005502385.1_00377 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MDHIEDQRIQLNNDEHVQHIKISSIKVNPYQPRKTFDEEKLQDLADSITTHGILQPIVLRKTINGYYIVVGERRFRASKLAGLEEVPAIVKSLSDSDMMELAIIENLQREDLNAIEEAESYQRLMNDLGLTQQKVAERLGKSRPYIANMLRLLNLPSDIAKLVREHRMSGAHGRTLLALKDVNTMKRIGKQAIKEGWSVRYLEKVVSEIQDGGQSKKEKLNTPSKPKSIQKQERALKEKFGTHIDISVSKNVGKIVFEFKSEAEFRRIIDKLNK . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 21407 22231 . - . GCA_005502385.1_00377_mRNA GCA_005502385.1_00377 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MDHIEDQRIQLNNDEHVQHIKISSIKVNPYQPRKTFDEEKLQDLADSITTHGILQPIVLRKTINGYYIVVGERRFRASKLAGLEEVPAIVKSLSDSDMMELAIIENLQREDLNAIEEAESYQRLMNDLGLTQQKVAERLGKSRPYIANMLRLLNLPSDIAKLVREHRMSGAHGRTLLALKDVNTMKRIGKQAIKEGWSVRYLEKVVSEIQDGGQSKKEKLNTPSKPKSIQKQERALKEKFGTHIDISVSKNVGKIVFEFKSEAEFRRIIDKLNK . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 21407 22231 . - 0 GCA_005502385.1_00377 GCA_005502385.1_00377_gene,GCA_005502385.1_00377_mRNA GCA_005502385.1_00377 Stage 0 sporulation protein J GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MDHIEDQRIQLNNDEHVQHIKISSIKVNPYQPRKTFDEEKLQDLADSITTHGILQPIVLRKTINGYYIVVGERRFRASKLAGLEEVPAIVKSLSDSDMMELAIIENLQREDLNAIEEAESYQRLMNDLGLTQQKVAERLGKSRPYIANMLRLLNLPSDIAKLVREHRMSGAHGRTLLALKDVNTMKRIGKQAIKEGWSVRYLEKVVSEIQDGGQSKKEKLNTPSKPKSIQKQERALKEKFGTHIDISVSKNVGKIVFEFKSEAEFRRIIDKLNK persistent 274 ParB/RepB/Spo0J family partition protein WP_049434864.1 UPI00066A4976 UniRef100_UPI00066A4976,UniRef50_A0A7H9DP41,UniRef90_A0A8X8KIV8 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 22458 22847 . + . GCA_005502385.1_00378_gene GCA_005502385.1_00378 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 22458 22847 . + . GCA_005502385.1_00378_mRNA GCA_005502385.1_00378 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 . . . . . . . GCA_005502385.1|SCOV01000015.1 Infernal:001001 misc_RNA 22458 22847 128.5 + . GCA_005502385.1_00378 GCA_005502385.1_00378_gene,GCA_005502385.1_00378_mRNA GCA_005502385.1_00378 T-box GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 22915 24018 . + . GCA_005502385.1_00379_gene GCA_005502385.1_00379 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MKDTQLAQISLTKDLTGAIANPIYLSTAYQHPHLGQSTGYDYTRTKNPTRSSFEEAFAKLEGGTASFATSSGMAAVQLICNLFKPGDEILVAFDLYGGTFRLFDYYEQQYGIHFKYVDFLNYEEVENSINKHTKALFIEPISNPQMIQIDVEPYYILSKKHHLLTIIDNTFLTPYLSTPLEQGADIVLHSATKYIGGHNDVLAGVVTVKDDTLAEQLGQFHNMIGATLSPLDCYLLQRGLKTLHLRIERSQDNARRLAKRCETSDSIDEVLYSGKTGMLSLRLNKAYSVAKFLENLEICIFAESLGGTETFITFPYTQTHVDMPDDEKDKRGIDEHLIRLSIGIEDYKDVEADIIQALENSKVGVIS . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 22915 24018 . + . GCA_005502385.1_00379_mRNA GCA_005502385.1_00379 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MKDTQLAQISLTKDLTGAIANPIYLSTAYQHPHLGQSTGYDYTRTKNPTRSSFEEAFAKLEGGTASFATSSGMAAVQLICNLFKPGDEILVAFDLYGGTFRLFDYYEQQYGIHFKYVDFLNYEEVENSINKHTKALFIEPISNPQMIQIDVEPYYILSKKHHLLTIIDNTFLTPYLSTPLEQGADIVLHSATKYIGGHNDVLAGVVTVKDDTLAEQLGQFHNMIGATLSPLDCYLLQRGLKTLHLRIERSQDNARRLAKRCETSDSIDEVLYSGKTGMLSLRLNKAYSVAKFLENLEICIFAESLGGTETFITFPYTQTHVDMPDDEKDKRGIDEHLIRLSIGIEDYKDVEADIIQALENSKVGVIS . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 22915 24018 . + 0 GCA_005502385.1_00379 GCA_005502385.1_00379_gene,GCA_005502385.1_00379_mRNA GCA_005502385.1_00379 Cystathionine gamma-synthase/O-acetylhomoserine (thiol)-lyase GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MKDTQLAQISLTKDLTGAIANPIYLSTAYQHPHLGQSTGYDYTRTKNPTRSSFEEAFAKLEGGTASFATSSGMAAVQLICNLFKPGDEILVAFDLYGGTFRLFDYYEQQYGIHFKYVDFLNYEEVENSINKHTKALFIEPISNPQMIQIDVEPYYILSKKHHLLTIIDNTFLTPYLSTPLEQGADIVLHSATKYIGGHNDVLAGVVTVKDDTLAEQLGQFHNMIGATLSPLDCYLLQRGLKTLHLRIERSQDNARRLAKRCETSDSIDEVLYSGKTGMLSLRLNKAYSVAKFLENLEICIFAESLGGTETFITFPYTQTHVDMPDDEKDKRGIDEHLIRLSIGIEDYKDVEADIIQALENSKVGVIS persistent 367 Methionine biosynthesis PLP-dependent protein WP_070492134.1 UPI0008A3357A UniRef100_UPI0008A3357A,UniRef50_A0A7U7JSJ6,UniRef90_A0A974KXW8 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 24015 25190 . + . GCA_005502385.1_00380_gene GCA_005502385.1_00380 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MSLSKETEVIFDEHRGVDYDSANPPLYDSSTFHQKVLGGNAKFDYARSGNPNRQLLEEKLAKLEGGQYGFAYASGIAAISAVLLTLQAEDHVILPDDVYGGTFRLTERILNRFNIKFTTVNATHPEEIEQAIQPNTKLIYIETPSNPCFKITDIKAVAHIAKKHDLLLAVDNTFMTPLGQSPLALGADIVVHSATKFLGGHSDIIAGAAITNRKDVAEALYLLQNGTGTALSAHDSWTLAKHLKTLPVRFRQSTSNAEKLVDFLSQRNEVAEVYYPGNSNLHLSQAKSGGAVIGFRLKDETKAQAFVDALTLPLVSVSLGGVETILSHPATMSHAAVPEEVRNKRGITFGLFRLSVGLEQPEELIADIDYALKEAFNESIIEPFEEQRFSS . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 24015 25190 . + . GCA_005502385.1_00380_mRNA GCA_005502385.1_00380 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MSLSKETEVIFDEHRGVDYDSANPPLYDSSTFHQKVLGGNAKFDYARSGNPNRQLLEEKLAKLEGGQYGFAYASGIAAISAVLLTLQAEDHVILPDDVYGGTFRLTERILNRFNIKFTTVNATHPEEIEQAIQPNTKLIYIETPSNPCFKITDIKAVAHIAKKHDLLLAVDNTFMTPLGQSPLALGADIVVHSATKFLGGHSDIIAGAAITNRKDVAEALYLLQNGTGTALSAHDSWTLAKHLKTLPVRFRQSTSNAEKLVDFLSQRNEVAEVYYPGNSNLHLSQAKSGGAVIGFRLKDETKAQAFVDALTLPLVSVSLGGVETILSHPATMSHAAVPEEVRNKRGITFGLFRLSVGLEQPEELIADIDYALKEAFNESIIEPFEEQRFSS . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 24015 25190 . + 0 GCA_005502385.1_00380 GCA_005502385.1_00380_gene,GCA_005502385.1_00380_mRNA GCA_005502385.1_00380 Cystathionine beta-lyase MetC GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MSLSKETEVIFDEHRGVDYDSANPPLYDSSTFHQKVLGGNAKFDYARSGNPNRQLLEEKLAKLEGGQYGFAYASGIAAISAVLLTLQAEDHVILPDDVYGGTFRLTERILNRFNIKFTTVNATHPEEIEQAIQPNTKLIYIETPSNPCFKITDIKAVAHIAKKHDLLLAVDNTFMTPLGQSPLALGADIVVHSATKFLGGHSDIIAGAAITNRKDVAEALYLLQNGTGTALSAHDSWTLAKHLKTLPVRFRQSTSNAEKLVDFLSQRNEVAEVYYPGNSNLHLSQAKSGGAVIGFRLKDETKAQAFVDALTLPLVSVSLGGVETILSHPATMSHAAVPEEVRNKRGITFGLFRLSVGLEQPEELIADIDYALKEAFNESIIEPFEEQRFSS persistent 391 metC cystathionine beta-lyase MetC 4.4.1.13 GO:0005737,GO:0009086,GO:0019346,GO:0030170,GO:0047804 COG0626,E WP_049434862.1 UPI00066CBD81 UniRef100_UPI00066CBD81,UniRef50_Q4L332,UniRef90_Q4L332 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 25144 26982 . + . GCA_005502385.1_00381_gene GCA_005502385.1_00381 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MSRLLNHLKNNVLVADGAMGTILYSEGLDTCPEAYNLTHPNKVERIHRSYIEAGADVIQTNTYGANFEKLKVFGLEHKVKEIHKAAVQIAKRAANKETFILGTVGGFRGIKQEDLSLSTIQYHTDNQIDTLIEEGVDGLLFETYYDLDELTSVITATRQKYDIPIIAQLTASNTNYLVDGTEINDALKQLVECGANVVGLNCHHGPHHMQRSFSHIELPEDAYLSCYPNASLLDIENSEFKYSDNAKYFGDVAQELINEGVRLIGGCCGTTPEHISYIKESVKDLKPVKTKKVIPIHRTINTNAKRTLKQNLTSKVKQRPTVIVELDTPKHLDTELFFENIGKLDEANIDAVTLADNSLATVRVSNIAAASLIKQRYDIEPLVHITCRDRNLIGLQSHLLGLSLIGVSEILAITGDPSKVGHLPGATNVYDVNSKGLTELALRFNQGINVDGDALKKHTNFNIAGAFDPNVRKLDGAVKRLEKKVAAGMSYFITQPVYSKEKIKEVYEATKHLDTPLFIGIMPIASYNNALFLHNEVPGIKMSEDVLNQFKAVKDDKEKTKELSLRLSKELIDTVHEYFNGLYLITPFQRIDYSLELAAYSKAITQNKEAIS . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 25144 26982 . + . GCA_005502385.1_00381_mRNA GCA_005502385.1_00381 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MSRLLNHLKNNVLVADGAMGTILYSEGLDTCPEAYNLTHPNKVERIHRSYIEAGADVIQTNTYGANFEKLKVFGLEHKVKEIHKAAVQIAKRAANKETFILGTVGGFRGIKQEDLSLSTIQYHTDNQIDTLIEEGVDGLLFETYYDLDELTSVITATRQKYDIPIIAQLTASNTNYLVDGTEINDALKQLVECGANVVGLNCHHGPHHMQRSFSHIELPEDAYLSCYPNASLLDIENSEFKYSDNAKYFGDVAQELINEGVRLIGGCCGTTPEHISYIKESVKDLKPVKTKKVIPIHRTINTNAKRTLKQNLTSKVKQRPTVIVELDTPKHLDTELFFENIGKLDEANIDAVTLADNSLATVRVSNIAAASLIKQRYDIEPLVHITCRDRNLIGLQSHLLGLSLIGVSEILAITGDPSKVGHLPGATNVYDVNSKGLTELALRFNQGINVDGDALKKHTNFNIAGAFDPNVRKLDGAVKRLEKKVAAGMSYFITQPVYSKEKIKEVYEATKHLDTPLFIGIMPIASYNNALFLHNEVPGIKMSEDVLNQFKAVKDDKEKTKELSLRLSKELIDTVHEYFNGLYLITPFQRIDYSLELAAYSKAITQNKEAIS . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 25144 26982 . + 0 GCA_005502385.1_00381 GCA_005502385.1_00381_gene,GCA_005502385.1_00381_mRNA GCA_005502385.1_00381 Bifunctional homocysteine S-methyltransferase/5%2C10-methylenetetrahydrofolate reductase GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MSRLLNHLKNNVLVADGAMGTILYSEGLDTCPEAYNLTHPNKVERIHRSYIEAGADVIQTNTYGANFEKLKVFGLEHKVKEIHKAAVQIAKRAANKETFILGTVGGFRGIKQEDLSLSTIQYHTDNQIDTLIEEGVDGLLFETYYDLDELTSVITATRQKYDIPIIAQLTASNTNYLVDGTEINDALKQLVECGANVVGLNCHHGPHHMQRSFSHIELPEDAYLSCYPNASLLDIENSEFKYSDNAKYFGDVAQELINEGVRLIGGCCGTTPEHISYIKESVKDLKPVKTKKVIPIHRTINTNAKRTLKQNLTSKVKQRPTVIVELDTPKHLDTELFFENIGKLDEANIDAVTLADNSLATVRVSNIAAASLIKQRYDIEPLVHITCRDRNLIGLQSHLLGLSLIGVSEILAITGDPSKVGHLPGATNVYDVNSKGLTELALRFNQGINVDGDALKKHTNFNIAGAFDPNVRKLDGAVKRLEKKVAAGMSYFITQPVYSKEKIKEVYEATKHLDTPLFIGIMPIASYNNALFLHNEVPGIKMSEDVLNQFKAVKDDKEKTKELSLRLSKELIDTVHEYFNGLYLITPFQRIDYSLELAAYSKAITQNKEAIS persistent 612 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase 1.5.1.20,2.1.1.10 UniRef50_A0A7U7JSP7,UniRef90_A0A3S7GV11 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 26979 29225 . + . GCA_005502385.1_00382_gene GCA_005502385.1_00382 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MTTIKTSNLGFPRLGRKREWKKAIESYWAKKIDKTELDQTLTDLHKENLLLQKNYNLDSVPVGDFSLYDHILDTSLLFNIIPERFQGRTVDDDLLFDIARGNKEHVASALIKWFNTNYHYIVPEWDNVEPKVNRNVLLDRFNYAKSINVNAHPVIVGPITFVKLSKGGNQSFEEKVQTLLPLYKEVLQSLVDAGAEYIQVDEPVLVTDESENYENITKEAYDYFADAGLGEKLVIQTYFERVNVKFLSRLPVAGLGLDFVHDHGYNLEQIKAGDFDQSKTLYAGIIDGRNVWAADIEAKKELIETLQPYTKAIVIQPSSSLLHVPVSLDDETLDTSIEEGLSFATEKLDELDALRRLFNNNDNKKYDELKARYERFQSQSFKNLEYDFDSVPTSRKSDFKDRKKAQDARLHLPDLPTTTIGSFPQTREVRKYRADWKNNRISDEEYNNFLENEIARWIKIQEEIGLDVLVHGEFERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPPVIYGDVKWTAPLTVKETVYAQSLTDKPVKGMLTGPVTILNWSFERVDVPRKVVQDQIALAIDEEVLALEEAGISVIQVDEPALREGLPLRSEYHEQYLADAVNSFKLATSSVQDETQIHTHMCYSQFGQIIHAIHDLDADVISIETSRSHGDLIKDFEDINYDLGIGLGVYDIHSPRIPTEEEIATAIDRSLQQIDRSLFWVNPDCGLKTRKEDEVKDALTVLVNTVRKKREEKNKPVA . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 26979 29225 . + . GCA_005502385.1_00382_mRNA GCA_005502385.1_00382 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MTTIKTSNLGFPRLGRKREWKKAIESYWAKKIDKTELDQTLTDLHKENLLLQKNYNLDSVPVGDFSLYDHILDTSLLFNIIPERFQGRTVDDDLLFDIARGNKEHVASALIKWFNTNYHYIVPEWDNVEPKVNRNVLLDRFNYAKSINVNAHPVIVGPITFVKLSKGGNQSFEEKVQTLLPLYKEVLQSLVDAGAEYIQVDEPVLVTDESENYENITKEAYDYFADAGLGEKLVIQTYFERVNVKFLSRLPVAGLGLDFVHDHGYNLEQIKAGDFDQSKTLYAGIIDGRNVWAADIEAKKELIETLQPYTKAIVIQPSSSLLHVPVSLDDETLDTSIEEGLSFATEKLDELDALRRLFNNNDNKKYDELKARYERFQSQSFKNLEYDFDSVPTSRKSDFKDRKKAQDARLHLPDLPTTTIGSFPQTREVRKYRADWKNNRISDEEYNNFLENEIARWIKIQEEIGLDVLVHGEFERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPPVIYGDVKWTAPLTVKETVYAQSLTDKPVKGMLTGPVTILNWSFERVDVPRKVVQDQIALAIDEEVLALEEAGISVIQVDEPALREGLPLRSEYHEQYLADAVNSFKLATSSVQDETQIHTHMCYSQFGQIIHAIHDLDADVISIETSRSHGDLIKDFEDINYDLGIGLGVYDIHSPRIPTEEEIATAIDRSLQQIDRSLFWVNPDCGLKTRKEDEVKDALTVLVNTVRKKREEKNKPVA . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 26979 29225 . + 0 GCA_005502385.1_00382 GCA_005502385.1_00382_gene,GCA_005502385.1_00382_mRNA GCA_005502385.1_00382 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MTTIKTSNLGFPRLGRKREWKKAIESYWAKKIDKTELDQTLTDLHKENLLLQKNYNLDSVPVGDFSLYDHILDTSLLFNIIPERFQGRTVDDDLLFDIARGNKEHVASALIKWFNTNYHYIVPEWDNVEPKVNRNVLLDRFNYAKSINVNAHPVIVGPITFVKLSKGGNQSFEEKVQTLLPLYKEVLQSLVDAGAEYIQVDEPVLVTDESENYENITKEAYDYFADAGLGEKLVIQTYFERVNVKFLSRLPVAGLGLDFVHDHGYNLEQIKAGDFDQSKTLYAGIIDGRNVWAADIEAKKELIETLQPYTKAIVIQPSSSLLHVPVSLDDETLDTSIEEGLSFATEKLDELDALRRLFNNNDNKKYDELKARYERFQSQSFKNLEYDFDSVPTSRKSDFKDRKKAQDARLHLPDLPTTTIGSFPQTREVRKYRADWKNNRISDEEYNNFLENEIARWIKIQEEIGLDVLVHGEFERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPPVIYGDVKWTAPLTVKETVYAQSLTDKPVKGMLTGPVTILNWSFERVDVPRKVVQDQIALAIDEEVLALEEAGISVIQVDEPALREGLPLRSEYHEQYLADAVNSFKLATSSVQDETQIHTHMCYSQFGQIIHAIHDLDADVISIETSRSHGDLIKDFEDINYDLGIGLGVYDIHSPRIPTEEEIATAIDRSLQQIDRSLFWVNPDCGLKTRKEDEVKDALTVLVNTVRKKREEKNKPVA persistent 748 metE 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 2.1.1.14 GO:0003871,GO:0008270,GO:0009086,GO:0032259 COG0620,E WP_049434858.1 UPI00066AB8F2 UniRef100_UPI00066AB8F2,UniRef50_Q8CWX6,UniRef90_Q4L330 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 29304 30050 . + . GCA_005502385.1_00383_gene GCA_005502385.1_00383 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MTNYPLWDQLQQLKTAEWVDLTHTFDPDIPRFSEFEKGQVSTLFTVKEHGFYVQRWNIVTQYGTHIDAPIHFVENKRYLEDLDLKELVLPLIVLDYSKEVKDNDDFIVTRQHLEQWEAENGRIEEGTFVALRTDWSKRWPDIEQFENRDTDGNQHLPGWGLDALKFLIEERGVKSIGHETFDTDASVDTAKNGDIVGERYILGQDTFQLELLTNLDQLPTRGAVIYAISPKPKDAPGFPVRAFAIKPS . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 29304 30050 . + . GCA_005502385.1_00383_mRNA GCA_005502385.1_00383 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MTNYPLWDQLQQLKTAEWVDLTHTFDPDIPRFSEFEKGQVSTLFTVKEHGFYVQRWNIVTQYGTHIDAPIHFVENKRYLEDLDLKELVLPLIVLDYSKEVKDNDDFIVTRQHLEQWEAENGRIEEGTFVALRTDWSKRWPDIEQFENRDTDGNQHLPGWGLDALKFLIEERGVKSIGHETFDTDASVDTAKNGDIVGERYILGQDTFQLELLTNLDQLPTRGAVIYAISPKPKDAPGFPVRAFAIKPS . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 29304 30050 . + 0 GCA_005502385.1_00383 GCA_005502385.1_00383_gene,GCA_005502385.1_00383_mRNA GCA_005502385.1_00383 Isatin hydrolase GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MTNYPLWDQLQQLKTAEWVDLTHTFDPDIPRFSEFEKGQVSTLFTVKEHGFYVQRWNIVTQYGTHIDAPIHFVENKRYLEDLDLKELVLPLIVLDYSKEVKDNDDFIVTRQHLEQWEAENGRIEEGTFVALRTDWSKRWPDIEQFENRDTDGNQHLPGWGLDALKFLIEERGVKSIGHETFDTDASVDTAKNGDIVGERYILGQDTFQLELLTNLDQLPTRGAVIYAISPKPKDAPGFPVRAFAIKPS persistent 248 Cyclase family protein COG1878,E WP_049434856.1 UPI00066E23D5 UniRef100_UPI00066E23D5,UniRef50_B9DIA3,UniRef90_A0A023UEM8 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 30670 32265 . - . GCA_005502385.1_00384_gene GCA_005502385.1_00384 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MNNSSIKQFIEEGNLTIGIEFGSTRIKTVAIDDNCKTLATGTFGWENTYQDGYWTYSMNDAWIGLQKSYSEMTKVIKEQYGTTVKKIKSLGISGMMHGYLVFDQKEDLLVPFRTWRNNNANHAAQILREAFQVNIPERWSIAQLYQSAIDDESHVAKVDYMTTLAGYIHWYLTDEKVLGIGDASGMFPIDVETKEYRQDIAKTFNQLFSEMGYHQDILEILPKVVVAGENAGYLTETGAKLIDPNGQLEAGCPMCAPEADAATGMVATNSVAPKTGNISAGTSIFSMIVLDKSLKNVYPEVDIVTTPDGYEVAMIHANNCTSDINAWVDLFGEVLEVMSVKYEKSELFTKLFESALNGDDKLGNLLSYGYISGEFITEVQQGYPMLVRSIDSSFDLANVMKTHIYSAFSTLKIGIDLLKENEDIEIHSIYGHGGIFKTKKVAQTFLAAAMQSPVSVMQTASEGGAWGIAVLARYLVAENDVNLSSYLNEIAFKDTESIKIKPNEKEIESFNRYIERFKKGLPIERLANEQL . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 30670 32265 . - . GCA_005502385.1_00384_mRNA GCA_005502385.1_00384 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MNNSSIKQFIEEGNLTIGIEFGSTRIKTVAIDDNCKTLATGTFGWENTYQDGYWTYSMNDAWIGLQKSYSEMTKVIKEQYGTTVKKIKSLGISGMMHGYLVFDQKEDLLVPFRTWRNNNANHAAQILREAFQVNIPERWSIAQLYQSAIDDESHVAKVDYMTTLAGYIHWYLTDEKVLGIGDASGMFPIDVETKEYRQDIAKTFNQLFSEMGYHQDILEILPKVVVAGENAGYLTETGAKLIDPNGQLEAGCPMCAPEADAATGMVATNSVAPKTGNISAGTSIFSMIVLDKSLKNVYPEVDIVTTPDGYEVAMIHANNCTSDINAWVDLFGEVLEVMSVKYEKSELFTKLFESALNGDDKLGNLLSYGYISGEFITEVQQGYPMLVRSIDSSFDLANVMKTHIYSAFSTLKIGIDLLKENEDIEIHSIYGHGGIFKTKKVAQTFLAAAMQSPVSVMQTASEGGAWGIAVLARYLVAENDVNLSSYLNEIAFKDTESIKIKPNEKEIESFNRYIERFKKGLPIERLANEQL . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 30670 32265 . - 0 GCA_005502385.1_00384 GCA_005502385.1_00384_gene,GCA_005502385.1_00384_mRNA GCA_005502385.1_00384 Xylulose kinase GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MNNSSIKQFIEEGNLTIGIEFGSTRIKTVAIDDNCKTLATGTFGWENTYQDGYWTYSMNDAWIGLQKSYSEMTKVIKEQYGTTVKKIKSLGISGMMHGYLVFDQKEDLLVPFRTWRNNNANHAAQILREAFQVNIPERWSIAQLYQSAIDDESHVAKVDYMTTLAGYIHWYLTDEKVLGIGDASGMFPIDVETKEYRQDIAKTFNQLFSEMGYHQDILEILPKVVVAGENAGYLTETGAKLIDPNGQLEAGCPMCAPEADAATGMVATNSVAPKTGNISAGTSIFSMIVLDKSLKNVYPEVDIVTTPDGYEVAMIHANNCTSDINAWVDLFGEVLEVMSVKYEKSELFTKLFESALNGDDKLGNLLSYGYISGEFITEVQQGYPMLVRSIDSSFDLANVMKTHIYSAFSTLKIGIDLLKENEDIEIHSIYGHGGIFKTKKVAQTFLAAAMQSPVSVMQTASEGGAWGIAVLARYLVAENDVNLSSYLNEIAFKDTESIKIKPNEKEIESFNRYIERFKKGLPIERLANEQL shell 531 ATPase WP_079335384.1 UPI0009A3D37E UniRef100_UPI0009A3D37E,UniRef50_A0A380GK46,UniRef90_A0A3S7GUB7 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 32572 32931 . + . GCA_005502385.1_00385_gene GCA_005502385.1_00385 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MENTNSKMHKNDNSYVLSALSYLSIFFAPVILPLLVWILSDEPTSEHGKKALGNHVITWISFFIGRAAFIFSKEVFDKPFDHQLLIFVIALIIAIVFFLIALILYILNIIRGIKILLKK . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 32572 32931 . + . GCA_005502385.1_00385_mRNA GCA_005502385.1_00385 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MENTNSKMHKNDNSYVLSALSYLSIFFAPVILPLLVWILSDEPTSEHGKKALGNHVITWISFFIGRAAFIFSKEVFDKPFDHQLLIFVIALIIAIVFFLIALILYILNIIRGIKILLKK . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 32572 32931 . + 0 GCA_005502385.1_00385 GCA_005502385.1_00385_gene,GCA_005502385.1_00385_mRNA GCA_005502385.1_00385 hypothetical protein GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MENTNSKMHKNDNSYVLSALSYLSIFFAPVILPLLVWILSDEPTSEHGKKALGNHVITWISFFIGRAAFIFSKEVFDKPFDHQLLIFVIALIIAIVFFLIALILYILNIIRGIKILLKK shell 119 DUF4870 domain-containing protein WP_025987127.1 UPI00039C7011 UniRef100_A0AAE5JL21,UniRef50_A0A0H2XEJ2,UniRef90_A0AAE5JL21 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 33007 33336 . - . GCA_005502385.1_00386_gene GCA_005502385.1_00386 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MARKYNAIKYVIKKNNDDLELYGLRLYEFNIKDGKAINISQPIFVNRDILIDKIQDGEAFTRAFRVSQNDYYAGQSIALSVNKHGYINNNFEVSRDVIRNVEESILDYK . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 33007 33336 . - . GCA_005502385.1_00386_mRNA GCA_005502385.1_00386 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MARKYNAIKYVIKKNNDDLELYGLRLYEFNIKDGKAINISQPIFVNRDILIDKIQDGEAFTRAFRVSQNDYYAGQSIALSVNKHGYINNNFEVSRDVIRNVEESILDYK . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 33007 33336 . - 0 GCA_005502385.1_00386 GCA_005502385.1_00386_gene,GCA_005502385.1_00386_mRNA GCA_005502385.1_00386 hypothetical protein GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MARKYNAIKYVIKKNNDDLELYGLRLYEFNIKDGKAINISQPIFVNRDILIDKIQDGEAFTRAFRVSQNDYYAGQSIALSVNKHGYINNNFEVSRDVIRNVEESILDYK shell 109 hypothetical protein WP_017175660.1 UPI0002E25A61 UniRef100_A0A6N0I309,UniRef50_A0A169SZA9,UniRef90_A0A6N0I309 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 33537 33911 . - . GCA_005502385.1_00387_gene GCA_005502385.1_00387 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MTSIVIVSHSYKIAEGIKDLNLQMTDNGINIIDIGGLDDNGIGTSFDRILSVINELDDDAICFYDIGSAGMNLDMAIEMYEGSHRIEKIEAPLVEGSFIASVALKSNKTMDEAIAEVKEQLKND . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 33537 33911 . - . GCA_005502385.1_00387_mRNA GCA_005502385.1_00387 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MTSIVIVSHSYKIAEGIKDLNLQMTDNGINIIDIGGLDDNGIGTSFDRILSVINELDDDAICFYDIGSAGMNLDMAIEMYEGSHRIEKIEAPLVEGSFIASVALKSNKTMDEAIAEVKEQLKND . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 33537 33911 . - 0 GCA_005502385.1_00387 GCA_005502385.1_00387_gene,GCA_005502385.1_00387_mRNA GCA_005502385.1_00387 PTS-dependent dihydroxyacetone kinase%2C phosphotransferase subunit DhaM GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MTSIVIVSHSYKIAEGIKDLNLQMTDNGINIIDIGGLDDNGIGTSFDRILSVINELDDDAICFYDIGSAGMNLDMAIEMYEGSHRIEKIEAPLVEGSFIASVALKSNKTMDEAIAEVKEQLKND shell 124 phosphoenolpyruvate--glycerone phosphotransferase UniRef50_A0A2T4MIK7,UniRef90_A0A6N0I2Y9 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 33908 34489 . - . GCA_005502385.1_00388_gene GCA_005502385.1_00388 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MNVQDMKTRLLSLVETFKEKESELTDLDRAIGDGDHGVNMVRGFEALEQGLDDTDMKSLFKSTGMTLMSKVGGASGPLYGFSFVKMANVVKDDIDKENLKEMIAAFSEAVKQRGKVELNEKTMYDVIERTREALDNDENIDFNTLQSYADETKNMIATKGRASYFKEDSKGYIDPGAQSSVYILNAMIGGEVE . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 33908 34489 . - . GCA_005502385.1_00388_mRNA GCA_005502385.1_00388 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MNVQDMKTRLLSLVETFKEKESELTDLDRAIGDGDHGVNMVRGFEALEQGLDDTDMKSLFKSTGMTLMSKVGGASGPLYGFSFVKMANVVKDDIDKENLKEMIAAFSEAVKQRGKVELNEKTMYDVIERTREALDNDENIDFNTLQSYADETKNMIATKGRASYFKEDSKGYIDPGAQSSVYILNAMIGGEVE . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 33908 34489 . - 0 GCA_005502385.1_00388 GCA_005502385.1_00388_gene,GCA_005502385.1_00388_mRNA GCA_005502385.1_00388 PTS-dependent dihydroxyacetone kinase%2C ADP-binding subunit DhaL GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MNVQDMKTRLLSLVETFKEKESELTDLDRAIGDGDHGVNMVRGFEALEQGLDDTDMKSLFKSTGMTLMSKVGGASGPLYGFSFVKMANVVKDDIDKENLKEMIAAFSEAVKQRGKVELNEKTMYDVIERTREALDNDENIDFNTLQSYADETKNMIATKGRASYFKEDSKGYIDPGAQSSVYILNAMIGGEVE shell 193 dhaL dihydroxyacetone kinase subunit DhaL 2.7.1.121 GO:0006071,GO:0047324 WP_017175658.1 UPI0002FA2BC2 UniRef100_A0A657M6H3,UniRef50_A0A380G5G0,UniRef90_A0A657M6H3 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 34521 35483 . - . GCA_005502385.1_00389_gene GCA_005502385.1_00389 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MKKLIKEKNNILTDMLEGIALTNDNIKIISETVVVKKNKKNSGVALVSGGGSGHEPAHAGYVANGMLDAAVCGEVFTSPTPDKILDAIKAVDTGDGVLLIVKNYAGDVMNFEMAQEMAQMEDIKVERVIVNDDIAVSDVEKRRGVAGTVFVHKYAGYLADQGLSLKDIKNKIEAFIPKIKSIGMALTSPMVPTTGKYSFDIDDNEMEIGIGIHGEKGLHREAIQSVDVIIERLLDELLKEVKDQSLIVMVNGMGGTPLSELSIVAKYLNQQFQEHDIAAKQWFVGDYMTSLDMQGFSITVVPYSEDIEKGLLAPTTSRYF . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 34521 35483 . - . GCA_005502385.1_00389_mRNA GCA_005502385.1_00389 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MKKLIKEKNNILTDMLEGIALTNDNIKIISETVVVKKNKKNSGVALVSGGGSGHEPAHAGYVANGMLDAAVCGEVFTSPTPDKILDAIKAVDTGDGVLLIVKNYAGDVMNFEMAQEMAQMEDIKVERVIVNDDIAVSDVEKRRGVAGTVFVHKYAGYLADQGLSLKDIKNKIEAFIPKIKSIGMALTSPMVPTTGKYSFDIDDNEMEIGIGIHGEKGLHREAIQSVDVIIERLLDELLKEVKDQSLIVMVNGMGGTPLSELSIVAKYLNQQFQEHDIAAKQWFVGDYMTSLDMQGFSITVVPYSEDIEKGLLAPTTSRYF . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 34521 35483 . - 0 GCA_005502385.1_00389 GCA_005502385.1_00389_gene,GCA_005502385.1_00389_mRNA GCA_005502385.1_00389 PTS-dependent dihydroxyacetone kinase%2C dihydroxyacetone-binding subunit DhaK GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MKKLIKEKNNILTDMLEGIALTNDNIKIISETVVVKKNKKNSGVALVSGGGSGHEPAHAGYVANGMLDAAVCGEVFTSPTPDKILDAIKAVDTGDGVLLIVKNYAGDVMNFEMAQEMAQMEDIKVERVIVNDDIAVSDVEKRRGVAGTVFVHKYAGYLADQGLSLKDIKNKIEAFIPKIKSIGMALTSPMVPTTGKYSFDIDDNEMEIGIGIHGEKGLHREAIQSVDVIIERLLDELLKEVKDQSLIVMVNGMGGTPLSELSIVAKYLNQQFQEHDIAAKQWFVGDYMTSLDMQGFSITVVPYSEDIEKGLLAPTTSRYF shell 320 dhaK dihydroxyacetone kinase subunit DhaK 2.7.1.121 GO:0004371,GO:0006071 WP_137689766.1 UPI0010F5BD35 UniRef100_UPI0010F5BD35,UniRef50_A0A0D6XPW7,UniRef90_A0A3S7GUW4 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 35678 36790 . - . GCA_005502385.1_00390_gene GCA_005502385.1_00390 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MAKIIYQSPGRYVQGKGVIESIADETQRLGSHALIISDEVVWNITKDQIDQSFSNNSEVNYNYETFKGESSENEINRIVDEAKTKGIDVVIGLGGGKALDTGKAVANALNASVIDFASTASMDAPTAAVSVIYDDNGVFSGYEFYPKNPDTVMVDSQIVAQAPVRLFASGMSDGLATLVEVESTLRRQGKNMFSGKPSLASLAIAQKCEEVIFEYGHSAYEAIKNHIVSPQVEAVIEANTLLSGLGFENGGLAAAHAIHNGFTALEGDIHHLTHGEKVAYGILVQLVLENAPTEKFVKYQQFLSSIHMPTTLEELHIADKSYEDLVRVGERALEPNDTFANLSDKLNADDIADAILTVSELSKSTLNSKG . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 35678 36790 . - . GCA_005502385.1_00390_mRNA GCA_005502385.1_00390 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MAKIIYQSPGRYVQGKGVIESIADETQRLGSHALIISDEVVWNITKDQIDQSFSNNSEVNYNYETFKGESSENEINRIVDEAKTKGIDVVIGLGGGKALDTGKAVANALNASVIDFASTASMDAPTAAVSVIYDDNGVFSGYEFYPKNPDTVMVDSQIVAQAPVRLFASGMSDGLATLVEVESTLRRQGKNMFSGKPSLASLAIAQKCEEVIFEYGHSAYEAIKNHIVSPQVEAVIEANTLLSGLGFENGGLAAAHAIHNGFTALEGDIHHLTHGEKVAYGILVQLVLENAPTEKFVKYQQFLSSIHMPTTLEELHIADKSYEDLVRVGERALEPNDTFANLSDKLNADDIADAILTVSELSKSTLNSKG . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 35678 36790 . - 0 GCA_005502385.1_00390 GCA_005502385.1_00390_gene,GCA_005502385.1_00390_mRNA GCA_005502385.1_00390 Glycerol dehydrogenase GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MAKIIYQSPGRYVQGKGVIESIADETQRLGSHALIISDEVVWNITKDQIDQSFSNNSEVNYNYETFKGESSENEINRIVDEAKTKGIDVVIGLGGGKALDTGKAVANALNASVIDFASTASMDAPTAAVSVIYDDNGVFSGYEFYPKNPDTVMVDSQIVAQAPVRLFASGMSDGLATLVEVESTLRRQGKNMFSGKPSLASLAIAQKCEEVIFEYGHSAYEAIKNHIVSPQVEAVIEANTLLSGLGFENGGLAAAHAIHNGFTALEGDIHHLTHGEKVAYGILVQLVLENAPTEKFVKYQQFLSSIHMPTTLEELHIADKSYEDLVRVGERALEPNDTFANLSDKLNADDIADAILTVSELSKSTLNSKG shell 370 Glycerol dehydrogenase WP_049434846.1 UPI00066EBF01 UniRef100_UPI00066EBF01,UniRef50_E7S7Y1,UniRef90_A0A091BWC5 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 37370 37912 . - . GCA_005502385.1_00391_gene GCA_005502385.1_00391 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MFGYQINDHLKLKILEEREAEPLFKLVDNNRNYLAEFLPFVDYTKKVEDSKTFIQSALQQFARGDGFHCGIWYDQKLVGVIGLHYLDLVNKRTSIGYYLAEDAQKKGIMTLCTKALIQYVYEEYDIHRIEIRMSTKNKKSRAIPIRLGFTQEGILRSDECLQGEFSDSYVYSLLREEYDD . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 37370 37912 . - . GCA_005502385.1_00391_mRNA GCA_005502385.1_00391 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MFGYQINDHLKLKILEEREAEPLFKLVDNNRNYLAEFLPFVDYTKKVEDSKTFIQSALQQFARGDGFHCGIWYDQKLVGVIGLHYLDLVNKRTSIGYYLAEDAQKKGIMTLCTKALIQYVYEEYDIHRIEIRMSTKNKKSRAIPIRLGFTQEGILRSDECLQGEFSDSYVYSLLREEYDD . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 37370 37912 . - 0 GCA_005502385.1_00391 GCA_005502385.1_00391_gene,GCA_005502385.1_00391_mRNA GCA_005502385.1_00391 Putative ribosomal N-acetyltransferase YdaF GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MFGYQINDHLKLKILEEREAEPLFKLVDNNRNYLAEFLPFVDYTKKVEDSKTFIQSALQQFARGDGFHCGIWYDQKLVGVIGLHYLDLVNKRTSIGYYLAEDAQKKGIMTLCTKALIQYVYEEYDIHRIEIRMSTKNKKSRAIPIRLGFTQEGILRSDECLQGEFSDSYVYSLLREEYDD persistent 180 RimJ/RimL family protein N-acetyltransferase WP_049434845.1 UPI00066DD263 UniRef100_UPI00066DD263,UniRef50_A0A2S6DUP1,UniRef90_A0A974KXP7 . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka gene 38092 39666 . + . GCA_005502385.1_00392_gene GCA_005502385.1_00392 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MENKSKQFSNVFIFASVIVGLLVIIGAIFPNQFGSISGAIGSFITETFGWYYMLLISIILIFCITLIFHPIGKLKLGKPDDKPEFNTISWLTMLFSAGMGIGLVFYGSSEPISHYLSPPTASKETEAALAEAMRSSFLHYGLHPWAVYGIVALALAYTQFRKNDLGLISRTLRPIFGNKVEGPLGTVVDVLAVFATIIGVAVSLGVGAMQINGGLNYLFGVPNNKLIQGIIILIVTVLFLISAWSGLSKGIQYLSNLNMLLAAMLLIIILIVGPTILIMNMFTSSIGEYLNTLIFNSFDVAPLNSQKHEWLQSWTIYYWGWWMSWSPFVGIFIARISKGRSIREFVIAVLGVPTIISMLWFTAFGITGIEIGKQSKHIFSMPPETQLFGIFNEMPMGAILSFIAIILVGSFFITSADSATFVLGMQTSFGRLNPSGFVKIVWGVMLSAIAYVLLLSGGSTGLDALQSAAIISALPFSFVVILMMISFFKDANQERKFLGLTLQPDHQRKKDYIKHNTNQQSKMK . . . . . . . GCA_005502385.1|SCOV01000015.1 prokka mRNA 38092 39666 . + . GCA_005502385.1_00392_mRNA GCA_005502385.1_00392 GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MENKSKQFSNVFIFASVIVGLLVIIGAIFPNQFGSISGAIGSFITETFGWYYMLLISIILIFCITLIFHPIGKLKLGKPDDKPEFNTISWLTMLFSAGMGIGLVFYGSSEPISHYLSPPTASKETEAALAEAMRSSFLHYGLHPWAVYGIVALALAYTQFRKNDLGLISRTLRPIFGNKVEGPLGTVVDVLAVFATIIGVAVSLGVGAMQINGGLNYLFGVPNNKLIQGIIILIVTVLFLISAWSGLSKGIQYLSNLNMLLAAMLLIIILIVGPTILIMNMFTSSIGEYLNTLIFNSFDVAPLNSQKHEWLQSWTIYYWGWWMSWSPFVGIFIARISKGRSIREFVIAVLGVPTIISMLWFTAFGITGIEIGKQSKHIFSMPPETQLFGIFNEMPMGAILSFIAIILVGSFFITSADSATFVLGMQTSFGRLNPSGFVKIVWGVMLSAIAYVLLLSGGSTGLDALQSAAIISALPFSFVVILMMISFFKDANQERKFLGLTLQPDHQRKKDYIKHNTNQQSKMK . . . . . . . GCA_005502385.1|SCOV01000015.1 Prodigal:002006 CDS 38092 39666 . + 0 GCA_005502385.1_00392 GCA_005502385.1_00392_gene,GCA_005502385.1_00392_mRNA GCA_005502385.1_00392 Glycine betaine transporter OpuD GCA_005502385.1 SCOV01000015.1 GCA_005502385.1|SCOV01000015.1 GCA_005502385.1_SCOV01000015.1 MENKSKQFSNVFIFASVIVGLLVIIGAIFPNQFGSISGAIGSFITETFGWYYMLLISIILIFCITLIFHPIGKLKLGKPDDKPEFNTISWLTMLFSAGMGIGLVFYGSSEPISHYLSPPTASKETEAALAEAMRSSFLHYGLHPWAVYGIVALALAYTQFRKNDLGLISRTLRPIFGNKVEGPLGTVVDVLAVFATIIGVAVSLGVGAMQINGGLNYLFGVPNNKLIQGIIILIVTVLFLISAWSGLSKGIQYLSNLNMLLAAMLLIIILIVGPTILIMNMFTSSIGEYLNTLIFNSFDVAPLNSQKHEWLQSWTIYYWGWWMSWSPFVGIFIARISKGRSIREFVIAVLGVPTIISMLWFTAFGITGIEIGKQSKHIFSMPPETQLFGIFNEMPMGAILSFIAIILVGSFFITSADSATFVLGMQTSFGRLNPSGFVKIVWGVMLSAIAYVLLLSGGSTGLDALQSAAIISALPFSFVVILMMISFFKDANQERKFLGLTLQPDHQRKKDYIKHNTNQQSKMK persistent 524 BCCT family transporter WP_049434843.1 UPI00066A7A7F UniRef100_UPI00066A7A7F,UniRef50_A0A1D4R1U3,UniRef90_A0A2K0AW70 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 35 109 . - . GCA_005502385.1_00393_gene GCA_005502385.1_00393 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 35 109 . - . GCA_005502385.1_00393_mRNA GCA_005502385.1_00393 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 . . . . . . . GCA_005502385.1|SCOV01000016.1 Aragorn:001002 tRNA 35 109 . - . GCA_005502385.1_00393 GCA_005502385.1_00393_gene,GCA_005502385.1_00393_mRNA GCA_005502385.1_00393 tRNA-Gly(gcc) GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 127 201 . - . GCA_005502385.1_00394_gene GCA_005502385.1_00394 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 127 201 . - . GCA_005502385.1_00394_mRNA GCA_005502385.1_00394 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 . . . . . . . GCA_005502385.1|SCOV01000016.1 Aragorn:001002 tRNA 127 201 . - . GCA_005502385.1_00394 GCA_005502385.1_00394_gene,GCA_005502385.1_00394_mRNA GCA_005502385.1_00394 tRNA-Lys(ttt) GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 206 281 . - . GCA_005502385.1_00395_gene GCA_005502385.1_00395 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 206 281 . - . GCA_005502385.1_00395_mRNA GCA_005502385.1_00395 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 . . . . . . . GCA_005502385.1|SCOV01000016.1 Aragorn:001002 tRNA 206 281 . - . GCA_005502385.1_00395 GCA_005502385.1_00395_gene,GCA_005502385.1_00395_mRNA GCA_005502385.1_00395 tRNA-Thr(tgt) GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 293 368 . - . GCA_005502385.1_00396_gene GCA_005502385.1_00396 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 293 368 . - . GCA_005502385.1_00396_mRNA GCA_005502385.1_00396 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 . . . . . . . GCA_005502385.1|SCOV01000016.1 Aragorn:001002 tRNA 293 368 . - . GCA_005502385.1_00396 GCA_005502385.1_00396_gene,GCA_005502385.1_00396_mRNA GCA_005502385.1_00396 tRNA-Val(tac) GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 382 491 . - . GCA_005502385.1_00397_gene GCA_005502385.1_00397 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 382 491 . - . GCA_005502385.1_00397_mRNA GCA_005502385.1_00397 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 . . . . . . . GCA_005502385.1|SCOV01000016.1 barrnap:0.9 rRNA 382 491 5.1e-11 - . GCA_005502385.1_00397 GCA_005502385.1_00397_gene,GCA_005502385.1_00397_mRNA GCA_005502385.1_00397 5S ribosomal RNA GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 828 2318 . - . GCA_005502385.1_00398_gene GCA_005502385.1_00398 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MSEEMNDQMQVRRQKLQELIDLGIDPFGKRFERTATASELKEKWDHFSKEELHEKEDESHVSIAGRLMTKRGKGKAGFAHVQDLTGQIQIYVRKDQIGEEPFDNLWKTTDLGDIVGIEGVMFKTNTGELSVKAKSFTLLSKALRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTRTFINRSKIIQEMRNYLNQRGYLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIAQTVLGSAKVQYNGEEIDLESDWKRLHIVDAVKEATGVNFYNVKTDEEAKALAKEHGIEITENMKYGHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRERFEAQLVEKEQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQK . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 828 2318 . - . GCA_005502385.1_00398_mRNA GCA_005502385.1_00398 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MSEEMNDQMQVRRQKLQELIDLGIDPFGKRFERTATASELKEKWDHFSKEELHEKEDESHVSIAGRLMTKRGKGKAGFAHVQDLTGQIQIYVRKDQIGEEPFDNLWKTTDLGDIVGIEGVMFKTNTGELSVKAKSFTLLSKALRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTRTFINRSKIIQEMRNYLNQRGYLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIAQTVLGSAKVQYNGEEIDLESDWKRLHIVDAVKEATGVNFYNVKTDEEAKALAKEHGIEITENMKYGHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRERFEAQLVEKEQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQK . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 828 2318 . - 0 GCA_005502385.1_00398 GCA_005502385.1_00398_gene,GCA_005502385.1_00398_mRNA GCA_005502385.1_00398 Lysine--tRNA ligase GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MSEEMNDQMQVRRQKLQELIDLGIDPFGKRFERTATASELKEKWDHFSKEELHEKEDESHVSIAGRLMTKRGKGKAGFAHVQDLTGQIQIYVRKDQIGEEPFDNLWKTTDLGDIVGIEGVMFKTNTGELSVKAKSFTLLSKALRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTRTFINRSKIIQEMRNYLNQRGYLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIAQTVLGSAKVQYNGEEIDLESDWKRLHIVDAVKEATGVNFYNVKTDEEAKALAKEHGIEITENMKYGHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRERFEAQLVEKEQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQK persistent 496 lysS lysine--tRNA ligase 6.1.1.6 GO:0000049,GO:0000287,GO:0004824,GO:0005524,GO:0005737,GO:0005829,GO:0006430,GO:0016740 COG1190,J WP_017176406.1 UPI00030D33A4 UniRef100_A0A3S7GUR4,UniRef50_Q8YAB8,UniRef90_Q4L3H5 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 2480 2959 . - . GCA_005502385.1_00399_gene GCA_005502385.1_00399 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MVQAYLGLGSNIGDRKQQLLKAIDLIGNIKGIKVTKQSSIYETAPIGYTDQPNFLNLCLEIETELSPQQLLKHCLDIEQQLHRVREIRWGPRTLDIDILLYSDNIIETDNLSIPHPRMQERAFVLIPLNDIASDKKDPRLNQKIHDLVFPDDTVKKYKD . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 2480 2959 . - . GCA_005502385.1_00399_mRNA GCA_005502385.1_00399 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MVQAYLGLGSNIGDRKQQLLKAIDLIGNIKGIKVTKQSSIYETAPIGYTDQPNFLNLCLEIETELSPQQLLKHCLDIEQQLHRVREIRWGPRTLDIDILLYSDNIIETDNLSIPHPRMQERAFVLIPLNDIASDKKDPRLNQKIHDLVFPDDTVKKYKD . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 2480 2959 . - 0 GCA_005502385.1_00399 GCA_005502385.1_00399_gene,GCA_005502385.1_00399_mRNA GCA_005502385.1_00399 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MVQAYLGLGSNIGDRKQQLLKAIDLIGNIKGIKVTKQSSIYETAPIGYTDQPNFLNLCLEIETELSPQQLLKHCLDIEQQLHRVREIRWGPRTLDIDILLYSDNIIETDNLSIPHPRMQERAFVLIPLNDIASDKKDPRLNQKIHDLVFPDDTVKKYKD persistent 159 folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 2.7.6.3 GO:0003848,GO:0009396 WP_017176407.1 UPI0002D5BAA6 UniRef100_A0A4Q9WMP2,UniRef50_A0A657ZPU6,UniRef90_A0A657ZPU6 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 2959 3324 . - . GCA_005502385.1_00400_gene GCA_005502385.1_00400 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MNDMIFLKGMKFYGYHGALTAENEIGQIFLVDVTLKVDLTKAGQTDNVKDTVHYGEVFEDVKDIVEGPPCNLIEHLAERIAKRINSHYNRVMETKVRITKENPPIPGHYDGVGIEIVRENR . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 2959 3324 . - . GCA_005502385.1_00400_mRNA GCA_005502385.1_00400 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MNDMIFLKGMKFYGYHGALTAENEIGQIFLVDVTLKVDLTKAGQTDNVKDTVHYGEVFEDVKDIVEGPPCNLIEHLAERIAKRINSHYNRVMETKVRITKENPPIPGHYDGVGIEIVRENR . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 2959 3324 . - 0 GCA_005502385.1_00400 GCA_005502385.1_00400_gene,GCA_005502385.1_00400_mRNA GCA_005502385.1_00400 Dihydroneopterin aldolase GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MNDMIFLKGMKFYGYHGALTAENEIGQIFLVDVTLKVDLTKAGQTDNVKDTVHYGEVFEDVKDIVEGPPCNLIEHLAERIAKRINSHYNRVMETKVRITKENPPIPGHYDGVGIEIVRENR persistent 121 folB dihydroneopterin aldolase 4.1.2.25 GO:0004150,GO:0006760 COG1539,H WP_048762009.1 UPI000660A366 UniRef100_UPI000660A366,UniRef50_Q5HRN9,UniRef90_Q4L3H3 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 3302 4105 . - . GCA_005502385.1_00401_gene GCA_005502385.1_00401 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MGKTKIMGILNVTPDSFSDGGQYNSIDNAVTRAKEMIDEGVDIIDVGGVSTRPGHTEVSLEEEMQRVVPVVEELVKLNVQISIDTYRSEVAEACLRLGATMINDQWAGLYDPHILDVVAKYEAEIVLMHNGDGQRDQPVVEEMLLTLIKQANKAEMAGIPKHKIWLDPGIGFAKSRKEENEVMARLDELVATEYPVLLATSRKRFIREMISTDTTPKERDEATAATTAYGIMKGIKAVRVHNVELNVRLAQGIDFLKENENERHDLS . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 3302 4105 . - . GCA_005502385.1_00401_mRNA GCA_005502385.1_00401 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MGKTKIMGILNVTPDSFSDGGQYNSIDNAVTRAKEMIDEGVDIIDVGGVSTRPGHTEVSLEEEMQRVVPVVEELVKLNVQISIDTYRSEVAEACLRLGATMINDQWAGLYDPHILDVVAKYEAEIVLMHNGDGQRDQPVVEEMLLTLIKQANKAEMAGIPKHKIWLDPGIGFAKSRKEENEVMARLDELVATEYPVLLATSRKRFIREMISTDTTPKERDEATAATTAYGIMKGIKAVRVHNVELNVRLAQGIDFLKENENERHDLS . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 3302 4105 . - 0 GCA_005502385.1_00401 GCA_005502385.1_00401_gene,GCA_005502385.1_00401_mRNA GCA_005502385.1_00401 Dihydropteroate synthase GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MGKTKIMGILNVTPDSFSDGGQYNSIDNAVTRAKEMIDEGVDIIDVGGVSTRPGHTEVSLEEEMQRVVPVVEELVKLNVQISIDTYRSEVAEACLRLGATMINDQWAGLYDPHILDVVAKYEAEIVLMHNGDGQRDQPVVEEMLLTLIKQANKAEMAGIPKHKIWLDPGIGFAKSRKEENEVMARLDELVATEYPVLLATSRKRFIREMISTDTTPKERDEATAATTAYGIMKGIKAVRVHNVELNVRLAQGIDFLKENENERHDLS persistent 267 folP dihydropteroate synthase 2.5.1.15 GO:0004156,GO:0009396 COG0294,H UniRef50_P64141,UniRef90_Q4L3H2 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 4287 5219 . - . GCA_005502385.1_00402_gene GCA_005502385.1_00402 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MAQKPVENITQIIGNTPVVKLRNVVDEDAADVYVKLEYQNPGGSVKDRIALAMIEKAEKEGKIKPGDTIVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSSERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKEEHGYFEPQQFENPANPEVHALTTGPELVEQFEGKQIDAFLAGVGTGGTLSGVGKVLKEKYPNVEIVAIEPEGSPVLSGGEPGPHKLQGLGAGFVPDTLNTNIYDSIIKVGNETAMETSRRVAKEEGILAGISSGAAIYAAIEKAKELGKGKTVVTVLPSNGERYLSTPLYSFDD . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 4287 5219 . - . GCA_005502385.1_00402_mRNA GCA_005502385.1_00402 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MAQKPVENITQIIGNTPVVKLRNVVDEDAADVYVKLEYQNPGGSVKDRIALAMIEKAEKEGKIKPGDTIVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSSERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKEEHGYFEPQQFENPANPEVHALTTGPELVEQFEGKQIDAFLAGVGTGGTLSGVGKVLKEKYPNVEIVAIEPEGSPVLSGGEPGPHKLQGLGAGFVPDTLNTNIYDSIIKVGNETAMETSRRVAKEEGILAGISSGAAIYAAIEKAKELGKGKTVVTVLPSNGERYLSTPLYSFDD . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 4287 5219 . - 0 GCA_005502385.1_00402 GCA_005502385.1_00402_gene,GCA_005502385.1_00402_mRNA GCA_005502385.1_00402 Cysteine synthase GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MAQKPVENITQIIGNTPVVKLRNVVDEDAADVYVKLEYQNPGGSVKDRIALAMIEKAEKEGKIKPGDTIVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSSERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKEEHGYFEPQQFENPANPEVHALTTGPELVEQFEGKQIDAFLAGVGTGGTLSGVGKVLKEKYPNVEIVAIEPEGSPVLSGGEPGPHKLQGLGAGFVPDTLNTNIYDSIIKVGNETAMETSRRVAKEEGILAGISSGAAIYAAIEKAKELGKGKTVVTVLPSNGERYLSTPLYSFDD persistent 310 cysK cysteine synthase A 2.5.1.47 GO:0004124,GO:0006535 COG0031,E WP_002449949.1 UPI000054BF13 UniRef100_A0A1J6EAU0,UniRef50_Q5HRP1,UniRef90_Q5HRP1 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 5416 6300 . - . GCA_005502385.1_00403_gene GCA_005502385.1_00403 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MTHDYIVKSLAFDGEVRAYAALTTESVQEGQTRHYTWPTASAAMGRTMTATLLMGAMLKGDQKLTVTVDGKGPIGRIIADADAQGNVRAYVDHPQTHFPLNDQGKLDVRRAVGTEGAIQVVKDVGMKDYFSGASPIVSGELGEDFTYYFATSEQTPSSVGLGVLVNPDNSIKAAGGFIIQVMPGAKEETITKLENAINQMQPVSKLIEQGLTPEGILNEILGEENVQILETMDAQFECNCSHEKFLNAIKGLGEAEIEDMIKEDHGAEAVCHFCGNKYHYSEGELQELLDTIKK . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 5416 6300 . - . GCA_005502385.1_00403_mRNA GCA_005502385.1_00403 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MTHDYIVKSLAFDGEVRAYAALTTESVQEGQTRHYTWPTASAAMGRTMTATLLMGAMLKGDQKLTVTVDGKGPIGRIIADADAQGNVRAYVDHPQTHFPLNDQGKLDVRRAVGTEGAIQVVKDVGMKDYFSGASPIVSGELGEDFTYYFATSEQTPSSVGLGVLVNPDNSIKAAGGFIIQVMPGAKEETITKLENAINQMQPVSKLIEQGLTPEGILNEILGEENVQILETMDAQFECNCSHEKFLNAIKGLGEAEIEDMIKEDHGAEAVCHFCGNKYHYSEGELQELLDTIKK . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 5416 6300 . - 0 GCA_005502385.1_00403 GCA_005502385.1_00403_gene,GCA_005502385.1_00403_mRNA GCA_005502385.1_00403 33 kDa chaperonin GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MTHDYIVKSLAFDGEVRAYAALTTESVQEGQTRHYTWPTASAAMGRTMTATLLMGAMLKGDQKLTVTVDGKGPIGRIIADADAQGNVRAYVDHPQTHFPLNDQGKLDVRRAVGTEGAIQVVKDVGMKDYFSGASPIVSGELGEDFTYYFATSEQTPSSVGLGVLVNPDNSIKAAGGFIIQVMPGAKEETITKLENAINQMQPVSKLIEQGLTPEGILNEILGEENVQILETMDAQFECNCSHEKFLNAIKGLGEAEIEDMIKEDHGAEAVCHFCGNKYHYSEGELQELLDTIKK persistent 294 hslO Hsp33 family molecular chaperone HslO GO:0005737,GO:0006457,GO:0042026,GO:0044183,GO:0051082 COG1281,O WP_017176410.1 UPI00030B402F UniRef100_A0A4Q9WNL8,UniRef50_P37565,UniRef90_Q4L3H0 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 6512 8644 . - . GCA_005502385.1_00404_gene GCA_005502385.1_00404 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MQKAFRNVLVIAIIGVIIFGVFSYINGNGNTPKQLSYSQFVEKLDKGDLKTLEIQPEQNVYLVSGKTKNDEDYSSTILYNNEKDLQKITSEARSQKGLDFTVKEEEKQSVFVSMLTTLIPVLIIAFLFIFFLSQAQGGGGGGRMMNFGKSKAKMYDNQKRRVRFSDVAGADEEKQELIEIVDFLKDNKKFKKMGSRIPKGVLLVGPPGTGKTLLARAVAGEAGAPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQLLVEMDGFGENEGIIMIAATNRPDILDPALLRPGRFDRQIQVGRPDVKGREAILHVHAKNKPLDETVDLKAISQRTPGFSGADLENLLNEASLIAAREGKNKIDMRDIEEATDRVIAGPAKKSRVISDKERNIVAHHEAGHTVIGMVLDEAEVVHKVTIVPRGQAGGYAMMLPKQDRFLMTEPELLDKICGLLGGRVSEDINFHEVSTGASNDFERATQIARSMVTEYGMSKKLGPLQFSTSGGGQVFLGKDMQGEPNYSGQIAYEIDKEVQRIIKEQYERCKQILLEHESQLKLIAKTLLTEETLVAEQIRSLFYDGVLPTVDYDAAKVVKDEDRDDSEFSNGKYGKSYDDIREEQLEEGRKDEAEDRREDNRIDHDRNNHRSDRNQSQNHSQRNDRDETGYEQSPNIEHPTDSNHRES . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 6512 8644 . - . GCA_005502385.1_00404_mRNA GCA_005502385.1_00404 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MQKAFRNVLVIAIIGVIIFGVFSYINGNGNTPKQLSYSQFVEKLDKGDLKTLEIQPEQNVYLVSGKTKNDEDYSSTILYNNEKDLQKITSEARSQKGLDFTVKEEEKQSVFVSMLTTLIPVLIIAFLFIFFLSQAQGGGGGGRMMNFGKSKAKMYDNQKRRVRFSDVAGADEEKQELIEIVDFLKDNKKFKKMGSRIPKGVLLVGPPGTGKTLLARAVAGEAGAPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQLLVEMDGFGENEGIIMIAATNRPDILDPALLRPGRFDRQIQVGRPDVKGREAILHVHAKNKPLDETVDLKAISQRTPGFSGADLENLLNEASLIAAREGKNKIDMRDIEEATDRVIAGPAKKSRVISDKERNIVAHHEAGHTVIGMVLDEAEVVHKVTIVPRGQAGGYAMMLPKQDRFLMTEPELLDKICGLLGGRVSEDINFHEVSTGASNDFERATQIARSMVTEYGMSKKLGPLQFSTSGGGQVFLGKDMQGEPNYSGQIAYEIDKEVQRIIKEQYERCKQILLEHESQLKLIAKTLLTEETLVAEQIRSLFYDGVLPTVDYDAAKVVKDEDRDDSEFSNGKYGKSYDDIREEQLEEGRKDEAEDRREDNRIDHDRNNHRSDRNQSQNHSQRNDRDETGYEQSPNIEHPTDSNHRES . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 6512 8644 . - 0 GCA_005502385.1_00404 GCA_005502385.1_00404_gene,GCA_005502385.1_00404_mRNA GCA_005502385.1_00404 ATP-dependent zinc metalloprotease FtsH GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MQKAFRNVLVIAIIGVIIFGVFSYINGNGNTPKQLSYSQFVEKLDKGDLKTLEIQPEQNVYLVSGKTKNDEDYSSTILYNNEKDLQKITSEARSQKGLDFTVKEEEKQSVFVSMLTTLIPVLIIAFLFIFFLSQAQGGGGGGRMMNFGKSKAKMYDNQKRRVRFSDVAGADEEKQELIEIVDFLKDNKKFKKMGSRIPKGVLLVGPPGTGKTLLARAVAGEAGAPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQLLVEMDGFGENEGIIMIAATNRPDILDPALLRPGRFDRQIQVGRPDVKGREAILHVHAKNKPLDETVDLKAISQRTPGFSGADLENLLNEASLIAAREGKNKIDMRDIEEATDRVIAGPAKKSRVISDKERNIVAHHEAGHTVIGMVLDEAEVVHKVTIVPRGQAGGYAMMLPKQDRFLMTEPELLDKICGLLGGRVSEDINFHEVSTGASNDFERATQIARSMVTEYGMSKKLGPLQFSTSGGGQVFLGKDMQGEPNYSGQIAYEIDKEVQRIIKEQYERCKQILLEHESQLKLIAKTLLTEETLVAEQIRSLFYDGVLPTVDYDAAKVVKDEDRDDSEFSNGKYGKSYDDIREEQLEEGRKDEAEDRREDNRIDHDRNNHRSDRNQSQNHSQRNDRDETGYEQSPNIEHPTDSNHRES persistent 710 ftsH ATP-dependent zinc metalloprotease FtsH 3.4.24.- GO:0004176,GO:0004222,GO:0005524,GO:0005886,GO:0006508,GO:0008270,GO:0016020,GO:0016887,GO:0030163,GO:0051301 COG0465,O WP_048678961.1 UPI0006608E5E UniRef100_UPI0006608E5E,UniRef50_Q88Z31,UniRef90_Q4L3G8 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 8928 9467 . - . GCA_005502385.1_00405_gene GCA_005502385.1_00405 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKDDLKDILLTEEEIQEICKDLGEQLTRDYKDKPLVCVGILKGSVMFMADLIKRIDTHLAIDFMDVSSYHGGTESTGEVQILKDLSASIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVVGYGLDYAEHYRNLPYIGTLKPEIYNK . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 8928 9467 . - . GCA_005502385.1_00405_mRNA GCA_005502385.1_00405 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKDDLKDILLTEEEIQEICKDLGEQLTRDYKDKPLVCVGILKGSVMFMADLIKRIDTHLAIDFMDVSSYHGGTESTGEVQILKDLSASIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVVGYGLDYAEHYRNLPYIGTLKPEIYNK . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 8928 9467 . - 0 GCA_005502385.1_00405 GCA_005502385.1_00405_gene,GCA_005502385.1_00405_mRNA GCA_005502385.1_00405 Hypoxanthine-guanine phosphoribosyltransferase GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKDDLKDILLTEEEIQEICKDLGEQLTRDYKDKPLVCVGILKGSVMFMADLIKRIDTHLAIDFMDVSSYHGGTESTGEVQILKDLSASIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVVGYGLDYAEHYRNLPYIGTLKPEIYNK persistent 179 hpt hypoxanthine phosphoribosyltransferase 2.4.2.8 GO:0006166 COG0634,F WP_017176412.1 UPI0002ED5F10 UniRef100_A0A4Q9WMQ2,UniRef50_Q839B2,UniRef90_A0A2J9WZQ3 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 9468 10769 . - . GCA_005502385.1_00406_gene GCA_005502385.1_00406 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKVKTSLWKKTDHLAVAVSTGIDSMCLLYKLLNDLSHSYQSITCLHVNHGLRDASVEEERFIKQFCKQHQIPCYVKQLDLSKIVEKGKSIQSEARDLRYQWFDEMMSKINADVLLTAHHLNDQLETIFYRVFTGRSTRNSLGMNECTERNHYFICRPLIETYKNDIKQYQTIHHVPFYEDESNHHNKYARNDIRNRLLPAIDENKDFNVEQLLKLKHWHDIQLQLTQQRISCFIEQHVNIHLNKERIQLSRASFNQLDEISKMILLDRLFEMLQLNKSFSEKNYNEWFEQIESKQSQIKIPLTEKWIIQIAYDKFIIMAHYEQSLLEEQIVTHPYTYQFGHYLITIHPNENDKAIDWPLTIRTRRDGDKFKLNGSHGHKKVSRLFIDKKIDSIERTQIPIILDAKQRVIAIGQLYVTTSFKHIIDIKKIGDDS . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 9468 10769 . - . GCA_005502385.1_00406_mRNA GCA_005502385.1_00406 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKVKTSLWKKTDHLAVAVSTGIDSMCLLYKLLNDLSHSYQSITCLHVNHGLRDASVEEERFIKQFCKQHQIPCYVKQLDLSKIVEKGKSIQSEARDLRYQWFDEMMSKINADVLLTAHHLNDQLETIFYRVFTGRSTRNSLGMNECTERNHYFICRPLIETYKNDIKQYQTIHHVPFYEDESNHHNKYARNDIRNRLLPAIDENKDFNVEQLLKLKHWHDIQLQLTQQRISCFIEQHVNIHLNKERIQLSRASFNQLDEISKMILLDRLFEMLQLNKSFSEKNYNEWFEQIESKQSQIKIPLTEKWIIQIAYDKFIIMAHYEQSLLEEQIVTHPYTYQFGHYLITIHPNENDKAIDWPLTIRTRRDGDKFKLNGSHGHKKVSRLFIDKKIDSIERTQIPIILDAKQRVIAIGQLYVTTSFKHIIDIKKIGDDS . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 9468 10769 . - 0 GCA_005502385.1_00406 GCA_005502385.1_00406_gene,GCA_005502385.1_00406_mRNA GCA_005502385.1_00406 tRNA(Ile)-lysidine synthase GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKVKTSLWKKTDHLAVAVSTGIDSMCLLYKLLNDLSHSYQSITCLHVNHGLRDASVEEERFIKQFCKQHQIPCYVKQLDLSKIVEKGKSIQSEARDLRYQWFDEMMSKINADVLLTAHHLNDQLETIFYRVFTGRSTRNSLGMNECTERNHYFICRPLIETYKNDIKQYQTIHHVPFYEDESNHHNKYARNDIRNRLLPAIDENKDFNVEQLLKLKHWHDIQLQLTQQRISCFIEQHVNIHLNKERIQLSRASFNQLDEISKMILLDRLFEMLQLNKSFSEKNYNEWFEQIESKQSQIKIPLTEKWIIQIAYDKFIIMAHYEQSLLEEQIVTHPYTYQFGHYLITIHPNENDKAIDWPLTIRTRRDGDKFKLNGSHGHKKVSRLFIDKKIDSIERTQIPIILDAKQRVIAIGQLYVTTSFKHIIDIKKIGDDS persistent 433 tRNA(Ile)-lysidine synthase 6.3.4.19 WP_048683369.1 UPI000660B35F UniRef100_UPI000660B35F,UniRef50_Q5HRP5,UniRef90_A0A8X8KG64 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 10977 11378 . - . GCA_005502385.1_00407_gene GCA_005502385.1_00407 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MSIEVGNKLKGKVTGIKKFGAFVELPEGKSGLVHISEVADNYVENVEDHLSVGDEVEVKVLSIADDGKISLSIKKAKDRPRRPHHKSNQNKPPQQKAEDFEKKLSNFLKDSEDKLTSIKRQTESRRGGKGSRR . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 10977 11378 . - . GCA_005502385.1_00407_mRNA GCA_005502385.1_00407 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MSIEVGNKLKGKVTGIKKFGAFVELPEGKSGLVHISEVADNYVENVEDHLSVGDEVEVKVLSIADDGKISLSIKKAKDRPRRPHHKSNQNKPPQQKAEDFEKKLSNFLKDSEDKLTSIKRQTESRRGGKGSRR . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 10977 11378 . - 0 GCA_005502385.1_00407 GCA_005502385.1_00407_gene,GCA_005502385.1_00407_mRNA GCA_005502385.1_00407 General stress protein 13 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MSIEVGNKLKGKVTGIKKFGAFVELPEGKSGLVHISEVADNYVENVEDHLSVGDEVEVKVLSIADDGKISLSIKKAKDRPRRPHHKSNQNKPPQQKAEDFEKKLSNFLKDSEDKLTSIKRQTESRRGGKGSRR persistent 133 yabR S1 domain-containing RNA-binding protein GO:0003676 COG1098,R WP_017176414.1 UPI0002E2F0C1 UniRef100_A0A4Q9WNH5,UniRef50_P37560,UniRef90_A0A653Y976 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 11513 11908 . - . GCA_005502385.1_00408_gene GCA_005502385.1_00408 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MSKKVEHIDNQYTSERNRKKQRQQKRMRVVRRRVTVFGGLLLAIIIILSIMLVFQKQSNNQATIERKHKEEQFQKKQDEEIALKEELNNLNDKDYIEKVARDDYYLSNNGEIIFKLPNDKSSSNSKSSSNN . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 11513 11908 . - . GCA_005502385.1_00408_mRNA GCA_005502385.1_00408 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MSKKVEHIDNQYTSERNRKKQRQQKRMRVVRRRVTVFGGLLLAIIIILSIMLVFQKQSNNQATIERKHKEEQFQKKQDEEIALKEELNNLNDKDYIEKVARDDYYLSNNGEIIFKLPNDKSSSNSKSSSNN . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 11513 11908 . - 0 GCA_005502385.1_00408 GCA_005502385.1_00408_gene,GCA_005502385.1_00408_mRNA GCA_005502385.1_00408 Cell division protein DivIC GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MSKKVEHIDNQYTSERNRKKQRQQKRMRVVRRRVTVFGGLLLAIIIILSIMLVFQKQSNNQATIERKHKEEQFQKKQDEEIALKEELNNLNDKDYIEKVARDDYYLSNNGEIIFKLPNDKSSSNSKSSSNN persistent 131 Septum formation initiator family protein WP_017176415.1 UPI0002D813DF UniRef100_A0A4V2KWX6,UniRef50_Q2G0R4,UniRef90_A0A974KW98 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 11944 12225 . - . GCA_005502385.1_00409_gene GCA_005502385.1_00409 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MRLDKYLKVSRLVKRRTLAKEISDQGRVTINGNVAKAGTDVKVEDELVIRFGQKRVTVKVTGLSEHASKENAKNMYELIKEERVQPSAQSGEV . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 11944 12225 . - . GCA_005502385.1_00409_mRNA GCA_005502385.1_00409 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MRLDKYLKVSRLVKRRTLAKEISDQGRVTINGNVAKAGTDVKVEDELVIRFGQKRVTVKVTGLSEHASKENAKNMYELIKEERVQPSAQSGEV . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 11944 12225 . - 0 GCA_005502385.1_00409 GCA_005502385.1_00409_gene,GCA_005502385.1_00409_mRNA GCA_005502385.1_00409 hypothetical protein GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MRLDKYLKVSRLVKRRTLAKEISDQGRVTINGNVAKAGTDVKVEDELVIRFGQKRVTVKVTGLSEHASKENAKNMYELIKEERVQPSAQSGEV persistent 93 RNA-binding S4 domain-containing protein WP_137689767.1 UPI0010F8B51C UniRef100_UPI0010F8B51C,UniRef50_P37557,UniRef90_A0A974KW71 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 12222 13412 . - . GCA_005502385.1_00410_gene GCA_005502385.1_00410 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MTHTLTIVGIGNHSMDDLPLGVYRFLKQQQSIYARTLEHPVIKDLKSDIEFKSFDDVYEKYDQFEAVYQHIVETLIEETRIQDTVYVVPGHPRVAETTTAKLLDYNKNNDDIHVKILGGKSFIDDIFVAIDEDPNDGFTLLDGTILKENTLNIRTHTLITQVYSAMIAADVKLTLMERYPDDFKVKIVTGANSQGAKVLEVPLFELDHNEDMFNNLTSVFVPKITRDEDMYTDFDFAVYIIDHLVDDEKGCPWDRVQTHESLKRYLLEETFELFEAIDNEDDWHMIEELGDILLQVLLHASIGKKEGYMDIKEVIESLNAKMIRRHPHIFGDKTVETIEDLNDVWKNAKAKEGKIPRVKFEKVFADHFMTLYDKTKNKDFNEETLKNYLQQGENDK . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 12222 13412 . - . GCA_005502385.1_00410_mRNA GCA_005502385.1_00410 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MTHTLTIVGIGNHSMDDLPLGVYRFLKQQQSIYARTLEHPVIKDLKSDIEFKSFDDVYEKYDQFEAVYQHIVETLIEETRIQDTVYVVPGHPRVAETTTAKLLDYNKNNDDIHVKILGGKSFIDDIFVAIDEDPNDGFTLLDGTILKENTLNIRTHTLITQVYSAMIAADVKLTLMERYPDDFKVKIVTGANSQGAKVLEVPLFELDHNEDMFNNLTSVFVPKITRDEDMYTDFDFAVYIIDHLVDDEKGCPWDRVQTHESLKRYLLEETFELFEAIDNEDDWHMIEELGDILLQVLLHASIGKKEGYMDIKEVIESLNAKMIRRHPHIFGDKTVETIEDLNDVWKNAKAKEGKIPRVKFEKVFADHFMTLYDKTKNKDFNEETLKNYLQQGENDK . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 12222 13412 . - 0 GCA_005502385.1_00410 GCA_005502385.1_00410_gene,GCA_005502385.1_00410_mRNA GCA_005502385.1_00410 hypothetical protein GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MTHTLTIVGIGNHSMDDLPLGVYRFLKQQQSIYARTLEHPVIKDLKSDIEFKSFDDVYEKYDQFEAVYQHIVETLIEETRIQDTVYVVPGHPRVAETTTAKLLDYNKNNDDIHVKILGGKSFIDDIFVAIDEDPNDGFTLLDGTILKENTLNIRTHTLITQVYSAMIAADVKLTLMERYPDDFKVKIVTGANSQGAKVLEVPLFELDHNEDMFNNLTSVFVPKITRDEDMYTDFDFAVYIIDHLVDDEKGCPWDRVQTHESLKRYLLEETFELFEAIDNEDDWHMIEELGDILLQVLLHASIGKKEGYMDIKEVIESLNAKMIRRHPHIFGDKTVETIEDLNDVWKNAKAKEGKIPRVKFEKVFADHFMTLYDKTKNKDFNEETLKNYLQQGENDK persistent 396 SAM-dependent methyltransferase WP_049419768.1 UPI00066A5825 UniRef100_UPI00066A5825,UniRef50_A0A240AB46,UniRef90_A0A4Q9WMP8 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 13415 14989 . - . GCA_005502385.1_00411_gene GCA_005502385.1_00411 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MSTNYKSSSEVSSSSKNSRQHSAFNGVVILTLALVIVKVLSAIYRVPYQNILGDSGLYAYQQIYPIVALGMILSMNAVPSAVTQVFGSHSGTEVFSKTLLRFQMIGLIIFSVILVFSHPLALLMGDAHLAPMLKMASFSYLFIGILGVIRGFYQSRQQMNIPAISQVIEQCIRVCVIIIAILMFMFKEWTIYQAGALAILASALGFLGSSLYLLATRPFRLQLNQHSYPLPWKQLILATLVFALSQLLVILWQFIDSFTVVHMLQTYGLGFREAIMQKGIYDRGASFIQIGLIVTTTFSFVLIPLLTDAMSDHNHVLMNRYTNASLKITLLISVAAGIGLINILPMMNHVFFKTDQLSFTLSIYMLTVIGVSLIMMDIALLQVMNQIRPIFIGVMSGLLFKIIFNVIFIHFMGILGASISTVLSLMIFVTILHYEVVKYYRFNRMRAFIVKLMSALIIMSVVIQGLRMLLPPVGRLGSLIELLIIVGIGGLIFLFLVMYMNILGYKELKHLPFGDKLYRIKKGR . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 13415 14989 . - . GCA_005502385.1_00411_mRNA GCA_005502385.1_00411 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MSTNYKSSSEVSSSSKNSRQHSAFNGVVILTLALVIVKVLSAIYRVPYQNILGDSGLYAYQQIYPIVALGMILSMNAVPSAVTQVFGSHSGTEVFSKTLLRFQMIGLIIFSVILVFSHPLALLMGDAHLAPMLKMASFSYLFIGILGVIRGFYQSRQQMNIPAISQVIEQCIRVCVIIIAILMFMFKEWTIYQAGALAILASALGFLGSSLYLLATRPFRLQLNQHSYPLPWKQLILATLVFALSQLLVILWQFIDSFTVVHMLQTYGLGFREAIMQKGIYDRGASFIQIGLIVTTTFSFVLIPLLTDAMSDHNHVLMNRYTNASLKITLLISVAAGIGLINILPMMNHVFFKTDQLSFTLSIYMLTVIGVSLIMMDIALLQVMNQIRPIFIGVMSGLLFKIIFNVIFIHFMGILGASISTVLSLMIFVTILHYEVVKYYRFNRMRAFIVKLMSALIIMSVVIQGLRMLLPPVGRLGSLIELLIIVGIGGLIFLFLVMYMNILGYKELKHLPFGDKLYRIKKGR . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 13415 14989 . - 0 GCA_005502385.1_00411 GCA_005502385.1_00411_gene,GCA_005502385.1_00411_mRNA GCA_005502385.1_00411 lipid II flippase MurJ GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MSTNYKSSSEVSSSSKNSRQHSAFNGVVILTLALVIVKVLSAIYRVPYQNILGDSGLYAYQQIYPIVALGMILSMNAVPSAVTQVFGSHSGTEVFSKTLLRFQMIGLIIFSVILVFSHPLALLMGDAHLAPMLKMASFSYLFIGILGVIRGFYQSRQQMNIPAISQVIEQCIRVCVIIIAILMFMFKEWTIYQAGALAILASALGFLGSSLYLLATRPFRLQLNQHSYPLPWKQLILATLVFALSQLLVILWQFIDSFTVVHMLQTYGLGFREAIMQKGIYDRGASFIQIGLIVTTTFSFVLIPLLTDAMSDHNHVLMNRYTNASLKITLLISVAAGIGLINILPMMNHVFFKTDQLSFTLSIYMLTVIGVSLIMMDIALLQVMNQIRPIFIGVMSGLLFKIIFNVIFIHFMGILGASISTVLSLMIFVTILHYEVVKYYRFNRMRAFIVKLMSALIIMSVVIQGLRMLLPPVGRLGSLIELLIIVGIGGLIFLFLVMYMNILGYKELKHLPFGDKLYRIKKGR persistent 524 Polysaccharide biosynthesis protein WP_017176418.1 UPI0002EF8ABC UniRef100_UPI002552DBA8,UniRef50_A0A380G459,UniRef90_A0A974QML2 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 14973 18482 . - . GCA_005502385.1_00412_gene GCA_005502385.1_00412 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MRTIISDYIQNDKRFQELDEVFGNQNILVTGLSPSAKATIIAEKYLNDDKQMLLITNNLYQADKLETDILQYIDHSEVYKYPVQDIMTEEFSTQSPQLMSERVRTLTALSHDKKGLFIVPLNGLKKWLTPVELWKHHQMTLEVGDDIDVDEFLNKLVNMGYRRESVVSHIGEFSLRGGIIDIYPLIGQPVRIELFDTEVDSIRDFDVETQRSNDNVEKVDITTASDYIITEDVINHLQTELQKAYEQTRPKIDKSVRNDLKETYESFKLFESTFFDHQLLRRLVAFMYDTPSTLIDYFQKDAIVVVDEYNRIKETEKTLTTEVDDFIQNLIESGNGFIGQSFMEYDGFETLINHYPVTYFTLFTSSMPVKLQHIIKFSCKPVQQFYGQYDIMRSEFQRYVSNNYTIVVLVETETKVERIQSMLNEMHIPTVTNIHSEIESGQAIVTEGSLSEGFELPYMQLVVITERELFKTKQKKQRKRTKTISNAEKIKSYQDLNVGDYVVHVHHGVGRYLGVETLEVGDVHRDYIKLQYKGTDQLFVPVDQMDQVQKYVASEDKSPKLNKLGGSEWKKTKAKVQQSVEDIADELIALYKEREMSVGYQYGEDTAEQHDFEMDFPYELTPDQAKSIEEIKEDMEKERPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPVEIQLISRFRTAKEVRETKEGLKSGYVDIVVGTHKLLSKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKTNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQNSNFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQMLMPEANIAVAHGQMTERDLEETMLSFINGEYDILVTTTIIETGVDVPNANTLIIEEADRFGLSQLYQLRGRVGRSSRIGYAYFLHSANKVLTETAEERLQAIKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDSVGFDLYSQMLEEAVNEKRGITEETPDAPDVEMELHLDAYLPAEYIQNEQAKIEIYKKLRKVETEEQLFDVKDELLDRFNDYPVEVERLLEMVEIKIHALHAGVTLIKDKGKQIEVFLSTKGTEQINGEELFKQTQPLGRTMKLGVKEGKMHITLTKSKQWLENLKFLVKCLEGSMELEYEL . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 14973 18482 . - . GCA_005502385.1_00412_mRNA GCA_005502385.1_00412 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MRTIISDYIQNDKRFQELDEVFGNQNILVTGLSPSAKATIIAEKYLNDDKQMLLITNNLYQADKLETDILQYIDHSEVYKYPVQDIMTEEFSTQSPQLMSERVRTLTALSHDKKGLFIVPLNGLKKWLTPVELWKHHQMTLEVGDDIDVDEFLNKLVNMGYRRESVVSHIGEFSLRGGIIDIYPLIGQPVRIELFDTEVDSIRDFDVETQRSNDNVEKVDITTASDYIITEDVINHLQTELQKAYEQTRPKIDKSVRNDLKETYESFKLFESTFFDHQLLRRLVAFMYDTPSTLIDYFQKDAIVVVDEYNRIKETEKTLTTEVDDFIQNLIESGNGFIGQSFMEYDGFETLINHYPVTYFTLFTSSMPVKLQHIIKFSCKPVQQFYGQYDIMRSEFQRYVSNNYTIVVLVETETKVERIQSMLNEMHIPTVTNIHSEIESGQAIVTEGSLSEGFELPYMQLVVITERELFKTKQKKQRKRTKTISNAEKIKSYQDLNVGDYVVHVHHGVGRYLGVETLEVGDVHRDYIKLQYKGTDQLFVPVDQMDQVQKYVASEDKSPKLNKLGGSEWKKTKAKVQQSVEDIADELIALYKEREMSVGYQYGEDTAEQHDFEMDFPYELTPDQAKSIEEIKEDMEKERPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPVEIQLISRFRTAKEVRETKEGLKSGYVDIVVGTHKLLSKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKTNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQNSNFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQMLMPEANIAVAHGQMTERDLEETMLSFINGEYDILVTTTIIETGVDVPNANTLIIEEADRFGLSQLYQLRGRVGRSSRIGYAYFLHSANKVLTETAEERLQAIKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDSVGFDLYSQMLEEAVNEKRGITEETPDAPDVEMELHLDAYLPAEYIQNEQAKIEIYKKLRKVETEEQLFDVKDELLDRFNDYPVEVERLLEMVEIKIHALHAGVTLIKDKGKQIEVFLSTKGTEQINGEELFKQTQPLGRTMKLGVKEGKMHITLTKSKQWLENLKFLVKCLEGSMELEYEL . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 14973 18482 . - 0 GCA_005502385.1_00412 GCA_005502385.1_00412_gene,GCA_005502385.1_00412_mRNA GCA_005502385.1_00412 Transcription-repair-coupling factor GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MRTIISDYIQNDKRFQELDEVFGNQNILVTGLSPSAKATIIAEKYLNDDKQMLLITNNLYQADKLETDILQYIDHSEVYKYPVQDIMTEEFSTQSPQLMSERVRTLTALSHDKKGLFIVPLNGLKKWLTPVELWKHHQMTLEVGDDIDVDEFLNKLVNMGYRRESVVSHIGEFSLRGGIIDIYPLIGQPVRIELFDTEVDSIRDFDVETQRSNDNVEKVDITTASDYIITEDVINHLQTELQKAYEQTRPKIDKSVRNDLKETYESFKLFESTFFDHQLLRRLVAFMYDTPSTLIDYFQKDAIVVVDEYNRIKETEKTLTTEVDDFIQNLIESGNGFIGQSFMEYDGFETLINHYPVTYFTLFTSSMPVKLQHIIKFSCKPVQQFYGQYDIMRSEFQRYVSNNYTIVVLVETETKVERIQSMLNEMHIPTVTNIHSEIESGQAIVTEGSLSEGFELPYMQLVVITERELFKTKQKKQRKRTKTISNAEKIKSYQDLNVGDYVVHVHHGVGRYLGVETLEVGDVHRDYIKLQYKGTDQLFVPVDQMDQVQKYVASEDKSPKLNKLGGSEWKKTKAKVQQSVEDIADELIALYKEREMSVGYQYGEDTAEQHDFEMDFPYELTPDQAKSIEEIKEDMEKERPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPVEIQLISRFRTAKEVRETKEGLKSGYVDIVVGTHKLLSKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKTNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQNSNFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQMLMPEANIAVAHGQMTERDLEETMLSFINGEYDILVTTTIIETGVDVPNANTLIIEEADRFGLSQLYQLRGRVGRSSRIGYAYFLHSANKVLTETAEERLQAIKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDSVGFDLYSQMLEEAVNEKRGITEETPDAPDVEMELHLDAYLPAEYIQNEQAKIEIYKKLRKVETEEQLFDVKDELLDRFNDYPVEVERLLEMVEIKIHALHAGVTLIKDKGKQIEVFLSTKGTEQINGEELFKQTQPLGRTMKLGVKEGKMHITLTKSKQWLENLKFLVKCLEGSMELEYEL persistent 1169 mfd transcription-repair coupling factor 3.6.4.- GO:0000716,GO:0003678,GO:0003684,GO:0005524,GO:0005737,GO:0006281,GO:0006355,GO:0016787 COG1197,LK WP_048684755.1 UPI00065FEFA3 UniRef100_UPI00065FEFA3,UniRef50_Q2G0R8,UniRef90_Q4L3G0 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 18479 19051 . - . GCA_005502385.1_00413_gene GCA_005502385.1_00413 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKCIVGLGNIGKRFERTRHNIGFEVIDYILDKNQFTLDKQKFKGAYTIERLNGDKVLFIEPMTMMNLSGEAVGPLMDYYNVEVEDLIVLYDDMDLSQGHIRLRQKGSAGGHNGMKSIIKHLGTDQFKRIRIGVGRPTNGMSVPDYVLQKFSNEEMMTMEKVIEHAAQAVEAFIETSRFDHVMNEYNGEVN . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 18479 19051 . - . GCA_005502385.1_00413_mRNA GCA_005502385.1_00413 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKCIVGLGNIGKRFERTRHNIGFEVIDYILDKNQFTLDKQKFKGAYTIERLNGDKVLFIEPMTMMNLSGEAVGPLMDYYNVEVEDLIVLYDDMDLSQGHIRLRQKGSAGGHNGMKSIIKHLGTDQFKRIRIGVGRPTNGMSVPDYVLQKFSNEEMMTMEKVIEHAAQAVEAFIETSRFDHVMNEYNGEVN . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 18479 19051 . - 0 GCA_005502385.1_00413 GCA_005502385.1_00413_gene,GCA_005502385.1_00413_mRNA GCA_005502385.1_00413 Peptidyl-tRNA hydrolase GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKCIVGLGNIGKRFERTRHNIGFEVIDYILDKNQFTLDKQKFKGAYTIERLNGDKVLFIEPMTMMNLSGEAVGPLMDYYNVEVEDLIVLYDDMDLSQGHIRLRQKGSAGGHNGMKSIIKHLGTDQFKRIRIGVGRPTNGMSVPDYVLQKFSNEEMMTMEKVIEHAAQAVEAFIETSRFDHVMNEYNGEVN persistent 190 pth aminoacyl-tRNA hydrolase 3.1.1.29 GO:0004045,GO:0005737,GO:0006412 COG0193,J WP_002449969.1 UPI00019FAF87 UniRef100_A0A1L8Y8L8,UniRef50_P37470,UniRef90_Q4L3F9 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 19358 20023 . - . GCA_005502385.1_00414_gene GCA_005502385.1_00414 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MASLKSIIRQGKQTRSDLKKLRNTGKVPAVVYGYGTKNTSVKVDEVEFIKVIREVGRNGVIDLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMTEERTVDVPVQLVGEAVGAKEGGVVEQPLFDLQITATPENIPESIEVDITDLQINDSYSVGDIKVSGDFTIENDPEESVVTVVPPTDEPSEEEIEAMEGESATEEPEVAGEDKEDKEDEENKDEE . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 19358 20023 . - . GCA_005502385.1_00414_mRNA GCA_005502385.1_00414 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MASLKSIIRQGKQTRSDLKKLRNTGKVPAVVYGYGTKNTSVKVDEVEFIKVIREVGRNGVIDLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMTEERTVDVPVQLVGEAVGAKEGGVVEQPLFDLQITATPENIPESIEVDITDLQINDSYSVGDIKVSGDFTIENDPEESVVTVVPPTDEPSEEEIEAMEGESATEEPEVAGEDKEDKEDEENKDEE . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 19358 20023 . - 0 GCA_005502385.1_00414 GCA_005502385.1_00414_gene,GCA_005502385.1_00414_mRNA GCA_005502385.1_00414 50S ribosomal protein L25 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MASLKSIIRQGKQTRSDLKKLRNTGKVPAVVYGYGTKNTSVKVDEVEFIKVIREVGRNGVIDLGVGSKTIKVMVSDYQFDPLKNQITHIDFLAINMTEERTVDVPVQLVGEAVGAKEGGVVEQPLFDLQITATPENIPESIEVDITDLQINDSYSVGDIKVSGDFTIENDPEESVVTVVPPTDEPSEEEIEAMEGESATEEPEVAGEDKEDKEDEENKDEE persistent 221 rplY 50S ribosomal protein L25/general stress protein Ctc GO:0003735,GO:0006412,GO:0008097,GO:0022625 COG1825,J WP_002455842.1 UPI0001EF5130 UniRef100_UPI00287A8B8B,UniRef50_Q2FJE0,UniRef90_Q4L3F8 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 20196 21161 . - . GCA_005502385.1_00415_gene GCA_005502385.1_00415 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MLNNEYKNSSLKIFSLKGNEPLAQEVADRVGIELGKCSVKRFSDGEIQINIEESIRGCDVFIIQPTSYPVNLHLMELLIMIDACKRASAANINIVVPYYGYARQDRKARSREPITAKLVANLIETAGANRMIALDLHAPQIQGFFDIPIDHLMGVPIIGQYFENDPNINPEECVVVSPDHGGVTRARKLADILKTPIAIIDKRRPKPNVAEVMNIVGEIEGRTAIIIDDIIDTAGTITLAAQALKDKGAKDVYACCTHPVLSGPAKERIENSAIKELIVTNSILLDDSQKPSNIKELSVAGLIAQAIVRVYERESVSVLFD . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 20196 21161 . - . GCA_005502385.1_00415_mRNA GCA_005502385.1_00415 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MLNNEYKNSSLKIFSLKGNEPLAQEVADRVGIELGKCSVKRFSDGEIQINIEESIRGCDVFIIQPTSYPVNLHLMELLIMIDACKRASAANINIVVPYYGYARQDRKARSREPITAKLVANLIETAGANRMIALDLHAPQIQGFFDIPIDHLMGVPIIGQYFENDPNINPEECVVVSPDHGGVTRARKLADILKTPIAIIDKRRPKPNVAEVMNIVGEIEGRTAIIIDDIIDTAGTITLAAQALKDKGAKDVYACCTHPVLSGPAKERIENSAIKELIVTNSILLDDSQKPSNIKELSVAGLIAQAIVRVYERESVSVLFD . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 20196 21161 . - 0 GCA_005502385.1_00415 GCA_005502385.1_00415_gene,GCA_005502385.1_00415_mRNA GCA_005502385.1_00415 Ribose-phosphate pyrophosphokinase GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MLNNEYKNSSLKIFSLKGNEPLAQEVADRVGIELGKCSVKRFSDGEIQINIEESIRGCDVFIIQPTSYPVNLHLMELLIMIDACKRASAANINIVVPYYGYARQDRKARSREPITAKLVANLIETAGANRMIALDLHAPQIQGFFDIPIDHLMGVPIIGQYFENDPNINPEECVVVSPDHGGVTRARKLADILKTPIAIIDKRRPKPNVAEVMNIVGEIEGRTAIIIDDIIDTAGTITLAAQALKDKGAKDVYACCTHPVLSGPAKERIENSAIKELIVTNSILLDDSQKPSNIKELSVAGLIAQAIVRVYERESVSVLFD persistent 321 ribose-phosphate diphosphokinase 2.7.6.1 GO:0004749,GO:0009156 WP_002449951.1 UPI00019FAF89 UniRef100_A0A1L8Y8G9,UniRef50_Q9CHB8,UniRef90_A0A1L8Y8G9 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 21374 22729 . - . GCA_005502385.1_00416_gene GCA_005502385.1_00416 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MQRNAIILAAGKGTRMKSKKYKVLHEVAGKPMVEHVLTNVKKAGVNQIVTIVGHGAEQVKETLGNQSLYSYQNEQLGTAHAVKMAEEHLHTQEGTTLVVCGDTPLITSETLQRLIAHHEETQAQVTVLSATAQTPFGYGRIVRDQNHHLNRIVEEKDATNAQKDINEISSGIFAFDNKTLFEKLKQVKNDNAQGEYYLPDVVTLILEDNGKAEVYHTDDFDEIMGVNDRIMLSHAEKALQHRINHHHMRNGVTIIDSNTTFIGPDVEIGMDTVIEPGVRINGKTFIGEDTHVGQYSEINNSRIGNKVNIIQSVINDSSVGNKTKVGPFAQLRPGSNLGAEVKVGNFVEVKKAELKDGAKVSHLSYIGDAKVGERTNIGCGSITVNYDGVNKFKTVIGKDAFIGCNTNLIAPVTVGDGALIAAGSTITDDIPKESLAFARARQVTKEGYNKK . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 21374 22729 . - . GCA_005502385.1_00416_mRNA GCA_005502385.1_00416 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MQRNAIILAAGKGTRMKSKKYKVLHEVAGKPMVEHVLTNVKKAGVNQIVTIVGHGAEQVKETLGNQSLYSYQNEQLGTAHAVKMAEEHLHTQEGTTLVVCGDTPLITSETLQRLIAHHEETQAQVTVLSATAQTPFGYGRIVRDQNHHLNRIVEEKDATNAQKDINEISSGIFAFDNKTLFEKLKQVKNDNAQGEYYLPDVVTLILEDNGKAEVYHTDDFDEIMGVNDRIMLSHAEKALQHRINHHHMRNGVTIIDSNTTFIGPDVEIGMDTVIEPGVRINGKTFIGEDTHVGQYSEINNSRIGNKVNIIQSVINDSSVGNKTKVGPFAQLRPGSNLGAEVKVGNFVEVKKAELKDGAKVSHLSYIGDAKVGERTNIGCGSITVNYDGVNKFKTVIGKDAFIGCNTNLIAPVTVGDGALIAAGSTITDDIPKESLAFARARQVTKEGYNKK . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 21374 22729 . - 0 GCA_005502385.1_00416 GCA_005502385.1_00416_gene,GCA_005502385.1_00416_mRNA GCA_005502385.1_00416 Bifunctional protein GlmU GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MQRNAIILAAGKGTRMKSKKYKVLHEVAGKPMVEHVLTNVKKAGVNQIVTIVGHGAEQVKETLGNQSLYSYQNEQLGTAHAVKMAEEHLHTQEGTTLVVCGDTPLITSETLQRLIAHHEETQAQVTVLSATAQTPFGYGRIVRDQNHHLNRIVEEKDATNAQKDINEISSGIFAFDNKTLFEKLKQVKNDNAQGEYYLPDVVTLILEDNGKAEVYHTDDFDEIMGVNDRIMLSHAEKALQHRINHHHMRNGVTIIDSNTTFIGPDVEIGMDTVIEPGVRINGKTFIGEDTHVGQYSEINNSRIGNKVNIIQSVINDSSVGNKTKVGPFAQLRPGSNLGAEVKVGNFVEVKKAELKDGAKVSHLSYIGDAKVGERTNIGCGSITVNYDGVNKFKTVIGKDAFIGCNTNLIAPVTVGDGALIAAGSTITDDIPKESLAFARARQVTKEGYNKK persistent 451 glmU bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU 2.3.1.157,2.7.7.23 GO:0000287,GO:0003977,GO:0006048,GO:0009252,GO:0019134 WP_137689768.1 UPI0010F791C5 UniRef100_UPI0010F791C5,UniRef50_Q88Z86,UniRef90_A0A3S7GUQ7 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 22992 23303 . - . GCA_005502385.1_00417_gene GCA_005502385.1_00417 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKVTDVRLRKIQTDGRMKALVSITLDEAFVIHDLRVIEGNSGLFVAMPSKRTPDGEFRDIAHPINSEMRQEIQDAVMKVYDETDEVIPDKNASSDVTEESDEA . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 22992 23303 . - . GCA_005502385.1_00417_mRNA GCA_005502385.1_00417 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKVTDVRLRKIQTDGRMKALVSITLDEAFVIHDLRVIEGNSGLFVAMPSKRTPDGEFRDIAHPINSEMRQEIQDAVMKVYDETDEVIPDKNASSDVTEESDEA . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 22992 23303 . - 0 GCA_005502385.1_00417 GCA_005502385.1_00417_gene,GCA_005502385.1_00417_mRNA GCA_005502385.1_00417 Putative septation protein SpoVG GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKVTDVRLRKIQTDGRMKALVSITLDEAFVIHDLRVIEGNSGLFVAMPSKRTPDGEFRDIAHPINSEMRQEIQDAVMKVYDETDEVIPDKNASSDVTEESDEA persistent 103 spoVG septation regulator SpoVG GO:0000917,GO:0030435 COG2088,D WP_002449945.1 UPI00019FAF8B UniRef100_A0A1L8Y8F8,UniRef50_B9DLD5,UniRef90_Q5HRQ7 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 23373 23753 . - . GCA_005502385.1_00418_gene GCA_005502385.1_00418 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKTINTNKAPEALGPYSHAMVVNNLVFTSGQIPLDTEGNIVSSDVKEQTKQVLENLSVVLEEAGSDLNSVVKATIFISDMNEFQQINEVYGSYFNEHQPARSCVEVSRLPKDVKVEIELVGKVKGI . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 23373 23753 . - . GCA_005502385.1_00418_mRNA GCA_005502385.1_00418 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKTINTNKAPEALGPYSHAMVVNNLVFTSGQIPLDTEGNIVSSDVKEQTKQVLENLSVVLEEAGSDLNSVVKATIFISDMNEFQQINEVYGSYFNEHQPARSCVEVSRLPKDVKVEIELVGKVKGI . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 23373 23753 . - 0 GCA_005502385.1_00418 GCA_005502385.1_00418_gene,GCA_005502385.1_00418_mRNA GCA_005502385.1_00418 2-iminobutanoate/2-iminopropanoate deaminase GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKTINTNKAPEALGPYSHAMVVNNLVFTSGQIPLDTEGNIVSSDVKEQTKQVLENLSVVLEEAGSDLNSVVKATIFISDMNEFQQINEVYGSYFNEHQPARSCVEVSRLPKDVKVEIELVGKVKGI persistent 126 ridA Translation initiation inhibitor COG0251,V WP_002449962.1 UPI00019FAF8C UniRef100_A0A2A1M9T1,UniRef50_A0A9P6J9P4,UniRef90_A0A380G3Q3 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 23769 24593 . - . GCA_005502385.1_00419_gene GCA_005502385.1_00419 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MRYKRSERIVFMTQYLMNHPNQLIPLTFFVKKFKQAKSSISEDVQIIKNTFQKEKLGTVITTAGASGGVTYKPMMSKEEAIEIIEEIITMLQEKERLLPGGYLFLSDLVGNPSLLNKVGKLIASIYMDEKLDAVVTIATKGISLANAVANVLNLPVVVIRKDNKVTEGSTVSINYVSGSSRKIETMVLSKRTLAENSNVLVVDDFMRAGGSINGVMNLMNEFKAEVKGVSVLVESKEVKQRLIEDYTSLVKLSDVDEYNQEFKVEPGNILSKFS . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 23769 24593 . - . GCA_005502385.1_00419_mRNA GCA_005502385.1_00419 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MRYKRSERIVFMTQYLMNHPNQLIPLTFFVKKFKQAKSSISEDVQIIKNTFQKEKLGTVITTAGASGGVTYKPMMSKEEAIEIIEEIITMLQEKERLLPGGYLFLSDLVGNPSLLNKVGKLIASIYMDEKLDAVVTIATKGISLANAVANVLNLPVVVIRKDNKVTEGSTVSINYVSGSSRKIETMVLSKRTLAENSNVLVVDDFMRAGGSINGVMNLMNEFKAEVKGVSVLVESKEVKQRLIEDYTSLVKLSDVDEYNQEFKVEPGNILSKFS . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 23769 24593 . - 0 GCA_005502385.1_00419 GCA_005502385.1_00419_gene,GCA_005502385.1_00419_mRNA GCA_005502385.1_00419 Pur operon repressor GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MRYKRSERIVFMTQYLMNHPNQLIPLTFFVKKFKQAKSSISEDVQIIKNTFQKEKLGTVITTAGASGGVTYKPMMSKEEAIEIIEEIITMLQEKERLLPGGYLFLSDLVGNPSLLNKVGKLIASIYMDEKLDAVVTIATKGISLANAVANVLNLPVVVIRKDNKVTEGSTVSINYVSGSSRKIETMVLSKRTLAENSNVLVVDDFMRAGGSINGVMNLMNEFKAEVKGVSVLVESKEVKQRLIEDYTSLVKLSDVDEYNQEFKVEPGNILSKFS persistent 274 purR pur operon repressor GO:0003677,GO:0006355,GO:0009116,GO:0045892,GO:0045982 COG0503,F WP_002449943.1 UPI00019FAF8D UniRef100_A0A1L8Y8F7,UniRef50_I0JH29,UniRef90_Q5HRQ9 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 24608 25456 . - . GCA_005502385.1_00420_gene GCA_005502385.1_00420 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MIYETAPAKINLTLDTLFKRNDGYHEIAMIMTTVDLNDRLSFQKRNDNKIVVDIEHNYVTNDHKNLAYQAAKLMMETYQLKQGVTISIDKDIPVSAGLAGGSADAAATMRGINRLYELGASLETLSQLGLQIGTDVPFCIYNKTAICKGRGEKIKFLDKPPSAWVVLAKPNLGISSPDIFKELNLKEDYDVHTEMCEEAIRQGDYMKLCKSLSNRLETVSMSMYPEIKKIKNNMLRCGADGALMSGSGPTVYAFAQKESQAKKVYNAVNGCCNEVYLVRLLG . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 24608 25456 . - . GCA_005502385.1_00420_mRNA GCA_005502385.1_00420 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MIYETAPAKINLTLDTLFKRNDGYHEIAMIMTTVDLNDRLSFQKRNDNKIVVDIEHNYVTNDHKNLAYQAAKLMMETYQLKQGVTISIDKDIPVSAGLAGGSADAAATMRGINRLYELGASLETLSQLGLQIGTDVPFCIYNKTAICKGRGEKIKFLDKPPSAWVVLAKPNLGISSPDIFKELNLKEDYDVHTEMCEEAIRQGDYMKLCKSLSNRLETVSMSMYPEIKKIKNNMLRCGADGALMSGSGPTVYAFAQKESQAKKVYNAVNGCCNEVYLVRLLG . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 24608 25456 . - 0 GCA_005502385.1_00420 GCA_005502385.1_00420_gene,GCA_005502385.1_00420_mRNA GCA_005502385.1_00420 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MIYETAPAKINLTLDTLFKRNDGYHEIAMIMTTVDLNDRLSFQKRNDNKIVVDIEHNYVTNDHKNLAYQAAKLMMETYQLKQGVTISIDKDIPVSAGLAGGSADAAATMRGINRLYELGASLETLSQLGLQIGTDVPFCIYNKTAICKGRGEKIKFLDKPPSAWVVLAKPNLGISSPDIFKELNLKEDYDVHTEMCEEAIRQGDYMKLCKSLSNRLETVSMSMYPEIKKIKNNMLRCGADGALMSGSGPTVYAFAQKESQAKKVYNAVNGCCNEVYLVRLLG persistent 282 ispE 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2.7.1.148 GO:0016114,GO:0050515 WP_017176422.1 UPI00037FBCA4 UniRef100_A0A3S7GXM1,UniRef50_B9E8V7,UniRef90_A0A3S7GXM1 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 25733 25996 . - . GCA_005502385.1_00421_gene GCA_005502385.1_00421 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MPKSILDIKNSIDCHLGNRIVLKANGGRKKTIERCGVLKETYPSVFIVELDQDKHNFERVSYTYTDVLTENVQVSFEEDNHQEVVAH . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 25733 25996 . - . GCA_005502385.1_00421_mRNA GCA_005502385.1_00421 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MPKSILDIKNSIDCHLGNRIVLKANGGRKKTIERCGVLKETYPSVFIVELDQDKHNFERVSYTYTDVLTENVQVSFEEDNHQEVVAH . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 25733 25996 . - 0 GCA_005502385.1_00421 GCA_005502385.1_00421_gene,GCA_005502385.1_00421_mRNA GCA_005502385.1_00421 Protein Veg GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MPKSILDIKNSIDCHLGNRIVLKANGGRKKTIERCGVLKETYPSVFIVELDQDKHNFERVSYTYTDVLTENVQVSFEEDNHQEVVAH persistent 87 Veg protein COG4466,S WP_002449940.1 UPI00019FAF8F UniRef100_A0A1L8Y8I8,UniRef50_Q2G0S9,UniRef90_Q2G0S9 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 26096 26986 . - . GCA_005502385.1_00422_gene GCA_005502385.1_00422 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MDRKDIATPSRTKELLNQFDFNFKKSLGQNFLVDVNIIHKIIDASHIDKSTGVIEVGPGMGSLTEQLAKSAKKVLSFEIDQRLIPVLKETLHPYDNVTIINEDILKADIAASVNTYLNDCDKIMVVANLPYYITTPILLNLMQQDIPIDGYVVMMQKEVGERLNAEVGTKAYGSLSIVTQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQREEPLVSVDDEQAFFKLAKAAFAQRRKTINNNYQNFFKDGKKYKSQIHQWLENANIDPKRRGETLSIQDFARLYEEKKNFPELEN . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 26096 26986 . - . GCA_005502385.1_00422_mRNA GCA_005502385.1_00422 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MDRKDIATPSRTKELLNQFDFNFKKSLGQNFLVDVNIIHKIIDASHIDKSTGVIEVGPGMGSLTEQLAKSAKKVLSFEIDQRLIPVLKETLHPYDNVTIINEDILKADIAASVNTYLNDCDKIMVVANLPYYITTPILLNLMQQDIPIDGYVVMMQKEVGERLNAEVGTKAYGSLSIVTQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQREEPLVSVDDEQAFFKLAKAAFAQRRKTINNNYQNFFKDGKKYKSQIHQWLENANIDPKRRGETLSIQDFARLYEEKKNFPELEN . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 26096 26986 . - 0 GCA_005502385.1_00422 GCA_005502385.1_00422_gene,GCA_005502385.1_00422_mRNA GCA_005502385.1_00422 Ribosomal RNA small subunit methyltransferase A GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MDRKDIATPSRTKELLNQFDFNFKKSLGQNFLVDVNIIHKIIDASHIDKSTGVIEVGPGMGSLTEQLAKSAKKVLSFEIDQRLIPVLKETLHPYDNVTIINEDILKADIAASVNTYLNDCDKIMVVANLPYYITTPILLNLMQQDIPIDGYVVMMQKEVGERLNAEVGTKAYGSLSIVTQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQREEPLVSVDDEQAFFKLAKAAFAQRRKTINNNYQNFFKDGKKYKSQIHQWLENANIDPKRRGETLSIQDFARLYEEKKNFPELEN persistent 296 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA 2.1.1.182 GO:0000179,GO:0003723,GO:0005829,GO:0006364,GO:0052908 COG0030,J WP_019835397.1 UPI0003626E55 UniRef100_UPI0003626E55,UniRef50_Q2G0T0,UniRef90_Q4L3F0 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 26989 27543 . - . GCA_005502385.1_00423_gene GCA_005502385.1_00423 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MNMRINEFIVVEGRDDTERVKTAVECDTIETNGSAINRETLAVIQNAQETRGVIVLTDPDFPGDRIRNIITEHVPGVKHAYVDREKAKNKRGKIGIEHTHPEDIKKALMHVSSPFEEGEESIDKSVLIDLGLIIGKDARRKREILGRKLHIGHSNGKQLLKKLNAFGYTEEDVRRALSMDKENN . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 26989 27543 . - . GCA_005502385.1_00423_mRNA GCA_005502385.1_00423 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MNMRINEFIVVEGRDDTERVKTAVECDTIETNGSAINRETLAVIQNAQETRGVIVLTDPDFPGDRIRNIITEHVPGVKHAYVDREKAKNKRGKIGIEHTHPEDIKKALMHVSSPFEEGEESIDKSVLIDLGLIIGKDARRKREILGRKLHIGHSNGKQLLKKLNAFGYTEEDVRRALSMDKENN . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 26989 27543 . - 0 GCA_005502385.1_00423 GCA_005502385.1_00423_gene,GCA_005502385.1_00423_mRNA GCA_005502385.1_00423 Ribonuclease M5 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MNMRINEFIVVEGRDDTERVKTAVECDTIETNGSAINRETLAVIQNAQETRGVIVLTDPDFPGDRIRNIITEHVPGVKHAYVDREKAKNKRGKIGIEHTHPEDIKKALMHVSSPFEEGEESIDKSVLIDLGLIIGKDARRKREILGRKLHIGHSNGKQLLKKLNAFGYTEEDVRRALSMDKENN persistent 184 rnmV ribonuclease M5 3.1.26.8 GO:0006364,GO:0043822 UniRef50_Q2G0T1,UniRef90_A0A657M5E2 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 27686 28456 . - . GCA_005502385.1_00424_gene GCA_005502385.1_00424 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MLIDTHVHLNDEQYDEDLSEVISRAREAGVDRMFVVGFDTKTIERTMELIDEYDFIYGIIGWHPVDAIDFTEERLEWIESLAQHPKIIGIGEMGLDYHWDKSPADVQKEVFRKQIALAKRVKLPIVIHNREATQDCVDILMEEHAEEVGGIMHSFSASPEIADVIINKLNFYVSLGGPVTFKNAKQPKEVAKHVPMDRLLVETDAPYLSPHPYRGKRNEPERVTLVAQQIAALRDMTYEEVCRQTTENAERLFNLN . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 27686 28456 . - . GCA_005502385.1_00424_mRNA GCA_005502385.1_00424 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MLIDTHVHLNDEQYDEDLSEVISRAREAGVDRMFVVGFDTKTIERTMELIDEYDFIYGIIGWHPVDAIDFTEERLEWIESLAQHPKIIGIGEMGLDYHWDKSPADVQKEVFRKQIALAKRVKLPIVIHNREATQDCVDILMEEHAEEVGGIMHSFSASPEIADVIINKLNFYVSLGGPVTFKNAKQPKEVAKHVPMDRLLVETDAPYLSPHPYRGKRNEPERVTLVAQQIAALRDMTYEEVCRQTTENAERLFNLN . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 27686 28456 . - 0 GCA_005502385.1_00424 GCA_005502385.1_00424_gene,GCA_005502385.1_00424_mRNA GCA_005502385.1_00424 D-aminoacyl-tRNA deacylase GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MLIDTHVHLNDEQYDEDLSEVISRAREAGVDRMFVVGFDTKTIERTMELIDEYDFIYGIIGWHPVDAIDFTEERLEWIESLAQHPKIIGIGEMGLDYHWDKSPADVQKEVFRKQIALAKRVKLPIVIHNREATQDCVDILMEEHAEEVGGIMHSFSASPEIADVIINKLNFYVSLGGPVTFKNAKQPKEVAKHVPMDRLLVETDAPYLSPHPYRGKRNEPERVTLVAQQIAALRDMTYEEVCRQTTENAERLFNLN persistent 256 tatD D-amino acyl-tRNA deacylase 3.1.21.- COG0084,N WP_137689769.1 UPI0010F48F3E UniRef100_UPI0010F48F3E,UniRef50_P37545,UniRef90_A0A653Y8V0 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 28480 30456 . - . GCA_005502385.1_00425_gene GCA_005502385.1_00425 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MAKETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQKAGKTELEYLDEMIAGIKRLWAKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGEYEGWYSVPDETYYTESQLVDPVYENGKIAGGKSPDSGHEVELVKEESYFFNINKYTDRLLEFYDANPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDALVNYISSLGYLSDDDSLFQKYWPADVHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLANDLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEALALETVKNFHDNMESFQFSVALSTVWKLISRTNKYIDETTPWVLAKDESQKDMLGNVMAHLVENIRFATVLLRPFLTHAPKEIFKQLNINNSDLYELSSLEHYGALQEPIMVTEKPSPIFPRLDSEDEIAFIKESMQPPKSNEDDKEEVPSKSQIDIKDFDKVEIKAATVIDAENVPKSDKLLKIQVDLGAEQRQIVSGIAKFYRPEDIIGKKVAVVTNLKPAKLMGHKSEGMILSAEKDKVLTLVSLPSAIPNGAIIK . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 28480 30456 . - . GCA_005502385.1_00425_mRNA GCA_005502385.1_00425 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MAKETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQKAGKTELEYLDEMIAGIKRLWAKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGEYEGWYSVPDETYYTESQLVDPVYENGKIAGGKSPDSGHEVELVKEESYFFNINKYTDRLLEFYDANPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDALVNYISSLGYLSDDDSLFQKYWPADVHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLANDLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEALALETVKNFHDNMESFQFSVALSTVWKLISRTNKYIDETTPWVLAKDESQKDMLGNVMAHLVENIRFATVLLRPFLTHAPKEIFKQLNINNSDLYELSSLEHYGALQEPIMVTEKPSPIFPRLDSEDEIAFIKESMQPPKSNEDDKEEVPSKSQIDIKDFDKVEIKAATVIDAENVPKSDKLLKIQVDLGAEQRQIVSGIAKFYRPEDIIGKKVAVVTNLKPAKLMGHKSEGMILSAEKDKVLTLVSLPSAIPNGAIIK . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 28480 30456 . - 0 GCA_005502385.1_00425 GCA_005502385.1_00425_gene,GCA_005502385.1_00425_mRNA GCA_005502385.1_00425 Methionine--tRNA ligase GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MAKETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQKAGKTELEYLDEMIAGIKRLWAKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGEYEGWYSVPDETYYTESQLVDPVYENGKIAGGKSPDSGHEVELVKEESYFFNINKYTDRLLEFYDANPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDALVNYISSLGYLSDDDSLFQKYWPADVHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLANDLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEALALETVKNFHDNMESFQFSVALSTVWKLISRTNKYIDETTPWVLAKDESQKDMLGNVMAHLVENIRFATVLLRPFLTHAPKEIFKQLNINNSDLYELSSLEHYGALQEPIMVTEKPSPIFPRLDSEDEIAFIKESMQPPKSNEDDKEEVPSKSQIDIKDFDKVEIKAATVIDAENVPKSDKLLKIQVDLGAEQRQIVSGIAKFYRPEDIIGKKVAVVTNLKPAKLMGHKSEGMILSAEKDKVLTLVSLPSAIPNGAIIK persistent 658 metG methionine--tRNA ligase 6.1.1.10 GO:0000049,GO:0004825,GO:0005524,GO:0005737,GO:0006431 COG0143,J WP_017176426.1 UPI0002F849E1 UniRef100_A0A3S7GY85,UniRef50_P23920,UniRef90_Q8NY00 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 30695 31537 . - . GCA_005502385.1_00426_gene GCA_005502385.1_00426 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MATLYLVGTPIGNLNDITFRAIETLKQVDIIACEDTRVTKKLCNHYDITTPLKSYHEHNKEQQTDYLIQLLKEENNIALVSDAGLPLISDPGYELVVEAHKHNIAVETIPGPNAGLTALMASGLPSFTYTFLGFLPRKEKEKVNILSQRMYQDSTLIIYESPFRVIDTLKAIIKVDSRRRVAVGRELTKKFEQVVMFEVSQLLEAIENQEIPQKGEFVILIEGAKAQETKQWFEDVTIIDHVNHYIETQNLKPKKAIKVVAEERQMKTSEIYDIYHNIKS . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 30695 31537 . - . GCA_005502385.1_00426_mRNA GCA_005502385.1_00426 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MATLYLVGTPIGNLNDITFRAIETLKQVDIIACEDTRVTKKLCNHYDITTPLKSYHEHNKEQQTDYLIQLLKEENNIALVSDAGLPLISDPGYELVVEAHKHNIAVETIPGPNAGLTALMASGLPSFTYTFLGFLPRKEKEKVNILSQRMYQDSTLIIYESPFRVIDTLKAIIKVDSRRRVAVGRELTKKFEQVVMFEVSQLLEAIENQEIPQKGEFVILIEGAKAQETKQWFEDVTIIDHVNHYIETQNLKPKKAIKVVAEERQMKTSEIYDIYHNIKS . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 30695 31537 . - 0 GCA_005502385.1_00426 GCA_005502385.1_00426_gene,GCA_005502385.1_00426_mRNA GCA_005502385.1_00426 Ribosomal RNA small subunit methyltransferase I GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MATLYLVGTPIGNLNDITFRAIETLKQVDIIACEDTRVTKKLCNHYDITTPLKSYHEHNKEQQTDYLIQLLKEENNIALVSDAGLPLISDPGYELVVEAHKHNIAVETIPGPNAGLTALMASGLPSFTYTFLGFLPRKEKEKVNILSQRMYQDSTLIIYESPFRVIDTLKAIIKVDSRRRVAVGRELTKKFEQVVMFEVSQLLEAIENQEIPQKGEFVILIEGAKAQETKQWFEDVTIIDHVNHYIETQNLKPKKAIKVVAEERQMKTSEIYDIYHNIKS persistent 280 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 2.1.1.198 GO:0000451,GO:0008649,GO:0008757 WP_137689770.1 UPI000928A29D UniRef100_UPI000928A29D,UniRef50_A0A380GAP2,UniRef90_A0A657ZP44 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 31539 31787 . - . GCA_005502385.1_00427_gene GCA_005502385.1_00427 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MGSHFVYIVRCSDNSLYTGYTNNIEARINKHNAGKGAKYTKIRRPVVLVYQEMYETKSEALRREYEIKTFTRQRKLKLIEEG . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 31539 31787 . - . GCA_005502385.1_00427_mRNA GCA_005502385.1_00427 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MGSHFVYIVRCSDNSLYTGYTNNIEARINKHNAGKGAKYTKIRRPVVLVYQEMYETKSEALRREYEIKTFTRQRKLKLIEEG . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 31539 31787 . - 0 GCA_005502385.1_00427 GCA_005502385.1_00427_gene,GCA_005502385.1_00427_mRNA GCA_005502385.1_00427 hypothetical protein UPF0213 protein BH0048 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MGSHFVYIVRCSDNSLYTGYTNNIEARINKHNAGKGAKYTKIRRPVVLVYQEMYETKSEALRREYEIKTFTRQRKLKLIEEG persistent 82 GIY-YIG domain-containing protein WP_017176428.1 UPI0002E7D237 UniRef100_A0A4Q9WR84,UniRef50_Q3ITQ4,UniRef90_A0AAE5JKK2 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 31780 32505 . - . GCA_005502385.1_00428_gene GCA_005502385.1_00428 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MLKEQERLDDLIKENLKIIQNDEVFSFSTDALLLAHFTKVRKNDSILDLCAGNGVIALLLSAKSHQKIESIEIQEQLADMAQRSFKYNRLEERLSMHNMDLKDVYQTFKPSQFTLITCNPPYFKRNQLHQHQKEAHKIARHEIMCSLEDCMFAARHLLKQGGRLVMVHRAERLMDVLTEMRQANIEPKRIVFIYSKHGKSAVTIVVEGRKNGNQGLEIAPPFYIYNENGEYSEQMKEVYYG . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 31780 32505 . - . GCA_005502385.1_00428_mRNA GCA_005502385.1_00428 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MLKEQERLDDLIKENLKIIQNDEVFSFSTDALLLAHFTKVRKNDSILDLCAGNGVIALLLSAKSHQKIESIEIQEQLADMAQRSFKYNRLEERLSMHNMDLKDVYQTFKPSQFTLITCNPPYFKRNQLHQHQKEAHKIARHEIMCSLEDCMFAARHLLKQGGRLVMVHRAERLMDVLTEMRQANIEPKRIVFIYSKHGKSAVTIVVEGRKNGNQGLEIAPPFYIYNENGEYSEQMKEVYYG . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 31780 32505 . - 0 GCA_005502385.1_00428 GCA_005502385.1_00428_gene,GCA_005502385.1_00428_mRNA GCA_005502385.1_00428 tRNA1(Val) (adenine(37)-N6)-methyltransferase GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MLKEQERLDDLIKENLKIIQNDEVFSFSTDALLLAHFTKVRKNDSILDLCAGNGVIALLLSAKSHQKIESIEIQEQLADMAQRSFKYNRLEERLSMHNMDLKDVYQTFKPSQFTLITCNPPYFKRNQLHQHQKEAHKIARHEIMCSLEDCMFAARHLLKQGGRLVMVHRAERLMDVLTEMRQANIEPKRIVFIYSKHGKSAVTIVVEGRKNGNQGLEIAPPFYIYNENGEYSEQMKEVYYG persistent 241 tRNA1(Val) (Adenine(37)-N6)-methyltransferase WP_019835400.1 UPI0003775FB7 UniRef100_UPI0003775FB7,UniRef50_A0A380G9L7,UniRef90_A0A533IYD7 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 32627 33019 . - . GCA_005502385.1_00429_gene GCA_005502385.1_00429 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MNRNDLFEKIVKLESNVNVLTQEMTELKSLAIQLIEENVTLQVENDNLKALMAKSEQDVESTKVNSESQHNKKSNENDFKSAIKNVKKPLPSKDNLAVLYSEGFHICNGELFGKHRYGEDCLLCMNVLNS . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 32627 33019 . - . GCA_005502385.1_00429_mRNA GCA_005502385.1_00429 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MNRNDLFEKIVKLESNVNVLTQEMTELKSLAIQLIEENVTLQVENDNLKALMAKSEQDVESTKVNSESQHNKKSNENDFKSAIKNVKKPLPSKDNLAVLYSEGFHICNGELFGKHRYGEDCLLCMNVLNS . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 32627 33019 . - 0 GCA_005502385.1_00429 GCA_005502385.1_00429_gene,GCA_005502385.1_00429_mRNA GCA_005502385.1_00429 Initiation-control protein YabA GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MNRNDLFEKIVKLESNVNVLTQEMTELKSLAIQLIEENVTLQVENDNLKALMAKSEQDVESTKVNSESQHNKKSNENDFKSAIKNVKKPLPSKDNLAVLYSEGFHICNGELFGKHRYGEDCLLCMNVLNS persistent 130 yabA DNA replication initiation control protein YabA WP_017176430.1 UPI000306D449 UniRef100_A0A4V2KWX3,UniRef50_Q99WB7,UniRef90_A0A657ZP86 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 33036 33839 . - . GCA_005502385.1_00430_gene GCA_005502385.1_00430 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MPNVVGVQFQKAGKLEYYAPNDLKLDSEDWVVVESKRGIEIGIVKLASKCVNDEDVTLPLKDILRIATEEDIQQYNQNEEDAEQALILCKQLVKDQDLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKVLAQNLRTRIELRQIGVRDEAKLLGGIGPCGRSLCCSTFLGDFQPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEARAQLPDVGDEIHTPEGTGQVVGLNILDISMQVKIDGLEQPLEYKMEELATFN . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 33036 33839 . - . GCA_005502385.1_00430_mRNA GCA_005502385.1_00430 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MPNVVGVQFQKAGKLEYYAPNDLKLDSEDWVVVESKRGIEIGIVKLASKCVNDEDVTLPLKDILRIATEEDIQQYNQNEEDAEQALILCKQLVKDQDLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKVLAQNLRTRIELRQIGVRDEAKLLGGIGPCGRSLCCSTFLGDFQPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEARAQLPDVGDEIHTPEGTGQVVGLNILDISMQVKIDGLEQPLEYKMEELATFN . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 33036 33839 . - 0 GCA_005502385.1_00430 GCA_005502385.1_00430_gene,GCA_005502385.1_00430_mRNA GCA_005502385.1_00430 hypothetical protein GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MPNVVGVQFQKAGKLEYYAPNDLKLDSEDWVVVESKRGIEIGIVKLASKCVNDEDVTLPLKDILRIATEEDIQQYNQNEEDAEQALILCKQLVKDQDLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKVLAQNLRTRIELRQIGVRDEAKLLGGIGPCGRSLCCSTFLGDFQPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEARAQLPDVGDEIHTPEGTGQVVGLNILDISMQVKIDGLEQPLEYKMEELATFN persistent 267 Stage 0 sporulation family protein WP_017176431.1 UPI0002DFF304 UniRef100_A0A4Q9WMR6,UniRef50_B9E8W6,UniRef90_A0A4Q9WMR6 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 33840 34766 . - . GCA_005502385.1_00431_gene GCA_005502385.1_00431 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MEELQKLANAFHSNKLSHAYLFEGDDAQSMKHVAMEFAQLILCNGNEQCELKLRNFNHPDFTYISSEESTIKKEQIEQLVRQMNQLPIEGTYKVYIIEDFEKLTVQGENSILKFLEEPPENTIAILISTKPEQILNTIHSRCQHMYFKPSDKSHFIDKLVDNGMNRAIAEMLSSYTTQIEVAKDLNEEYDLIELRKVIVHWCELLLTNKPMALIGVIDVLKNAKNRKLQLLTLSVINAFFEDMMHAKVGIENNFIFTDLKPLIKEYTTRLTLNQMILMYDQITEAHKKLIQNVNPMLVFEQIVIKGVS . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 33840 34766 . - . GCA_005502385.1_00431_mRNA GCA_005502385.1_00431 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MEELQKLANAFHSNKLSHAYLFEGDDAQSMKHVAMEFAQLILCNGNEQCELKLRNFNHPDFTYISSEESTIKKEQIEQLVRQMNQLPIEGTYKVYIIEDFEKLTVQGENSILKFLEEPPENTIAILISTKPEQILNTIHSRCQHMYFKPSDKSHFIDKLVDNGMNRAIAEMLSSYTTQIEVAKDLNEEYDLIELRKVIVHWCELLLTNKPMALIGVIDVLKNAKNRKLQLLTLSVINAFFEDMMHAKVGIENNFIFTDLKPLIKEYTTRLTLNQMILMYDQITEAHKKLIQNVNPMLVFEQIVIKGVS . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 33840 34766 . - 0 GCA_005502385.1_00431 GCA_005502385.1_00431_gene,GCA_005502385.1_00431_mRNA GCA_005502385.1_00431 hypothetical protein """""" GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MEELQKLANAFHSNKLSHAYLFEGDDAQSMKHVAMEFAQLILCNGNEQCELKLRNFNHPDFTYISSEESTIKKEQIEQLVRQMNQLPIEGTYKVYIIEDFEKLTVQGENSILKFLEEPPENTIAILISTKPEQILNTIHSRCQHMYFKPSDKSHFIDKLVDNGMNRAIAEMLSSYTTQIEVAKDLNEEYDLIELRKVIVHWCELLLTNKPMALIGVIDVLKNAKNRKLQLLTLSVINAFFEDMMHAKVGIENNFIFTDLKPLIKEYTTRLTLNQMILMYDQITEAHKKLIQNVNPMLVFEQIVIKGVS persistent 308 DNA polymerase III subunit delta' WP_019835402.1 UPI000369984C UniRef100_A0A8I0WAQ3,UniRef50_B9DLG1,UniRef90_A0A3S7GXN1 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 34944 35273 . - . GCA_005502385.1_00432_gene GCA_005502385.1_00432 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKMIIAIVQDQDSQELSDQLVKNNFRATKLATTGGFLRAGNTTFLCGVDDERVDEALTVIDNTCGNRDQLVSPMTPMGGSADSYIPYPVEVEVGGATVFVMPVEKFHRF . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 34944 35273 . - . GCA_005502385.1_00432_mRNA GCA_005502385.1_00432 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKMIIAIVQDQDSQELSDQLVKNNFRATKLATTGGFLRAGNTTFLCGVDDERVDEALTVIDNTCGNRDQLVSPMTPMGGSADSYIPYPVEVEVGGATVFVMPVEKFHRF . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 34944 35273 . - 0 GCA_005502385.1_00432 GCA_005502385.1_00432_gene,GCA_005502385.1_00432_mRNA GCA_005502385.1_00432 Cyclic di-AMP receptor A GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKMIIAIVQDQDSQELSDQLVKNNFRATKLATTGGFLRAGNTTFLCGVDDERVDEALTVIDNTCGNRDQLVSPMTPMGGSADSYIPYPVEVEVGGATVFVMPVEKFHRF persistent 109 Transcriptional regulator WP_002455851.1 UPI0001EF5139 UniRef100_A0A1L8Y8J7,UniRef50_B2A321,UniRef90_A0A853V322 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 35301 35918 . - . GCA_005502385.1_00433_gene GCA_005502385.1_00433 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MAAFITFEGPEGSGKTTVLNQINKLLSENYNVISTREPGGVSTGEEIRNILLDGENIDIRTEALLFAASRREHLVEKVIPALKNNKVVLCDRYIDSSLAYQGHARGIGIEEVKKINEFAINGLYPDLTIYLDIDAEVGRERILKNQRSQNRLDKETLTFHQKVIEGYKTLIKTNPERFKVIDATQNIESVVSDTYEIILSYLKNL . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 35301 35918 . - . GCA_005502385.1_00433_mRNA GCA_005502385.1_00433 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MAAFITFEGPEGSGKTTVLNQINKLLSENYNVISTREPGGVSTGEEIRNILLDGENIDIRTEALLFAASRREHLVEKVIPALKNNKVVLCDRYIDSSLAYQGHARGIGIEEVKKINEFAINGLYPDLTIYLDIDAEVGRERILKNQRSQNRLDKETLTFHQKVIEGYKTLIKTNPERFKVIDATQNIESVVSDTYEIILSYLKNL . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 35301 35918 . - 0 GCA_005502385.1_00433 GCA_005502385.1_00433_gene,GCA_005502385.1_00433_mRNA GCA_005502385.1_00433 Thymidylate kinase GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MAAFITFEGPEGSGKTTVLNQINKLLSENYNVISTREPGGVSTGEEIRNILLDGENIDIRTEALLFAASRREHLVEKVIPALKNNKVVLCDRYIDSSLAYQGHARGIGIEEVKKINEFAINGLYPDLTIYLDIDAEVGRERILKNQRSQNRLDKETLTFHQKVIEGYKTLIKTNPERFKVIDATQNIESVVSDTYEIILSYLKNL persistent 205 tmk dTMP kinase 2.7.4.9 GO:0004798,GO:0005524,GO:0006233 WP_049415672.1 UPI00066E8FD0 UniRef100_UPI00066E8FD0,UniRef50_Q830L6,UniRef90_A0A8X8GZ12 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 35920 37257 . - . GCA_005502385.1_00434_gene GCA_005502385.1_00434 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKLPITQKLDDLIHHYAISLHVPGHKNMTIGYLDALSLKMDMTEITGLDDLHHPEDTILESMNRVNKHPNYDAYYLVNGTTSGILSVIQAFTHIKGRYLISRNVHKSVFNALDLTQQSADILPMYRSDKSYQYLAPLIDTKMLRHQKLAVVTYPNYYGECFDIKQCVKQFHDYNIPVLVDEAHGAHFNLKHFPKSALESEADYVVQSYHKTLPTLTMGSVLFIHKNAPLKDEVIKYLGIFQTSSPSYLVMSSIELAHQFYNSYDSSLFFEKRKQLIETLRQQHFEVIEVEDPLKLIVRANGHTGLEVQRYFEKNHIYIELANDYQILIVLPLWHFNDRYPFKTLLHRIKTIKLPKKAKEKLEPVLLPLEKSVYVSKYINHAYWININKAQDKVLAQHIVPYPPGIPVFWKGEKVTKNMIKLMQYYLSHSVRVEGIKNDKILVKDE . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 35920 37257 . - . GCA_005502385.1_00434_mRNA GCA_005502385.1_00434 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKLPITQKLDDLIHHYAISLHVPGHKNMTIGYLDALSLKMDMTEITGLDDLHHPEDTILESMNRVNKHPNYDAYYLVNGTTSGILSVIQAFTHIKGRYLISRNVHKSVFNALDLTQQSADILPMYRSDKSYQYLAPLIDTKMLRHQKLAVVTYPNYYGECFDIKQCVKQFHDYNIPVLVDEAHGAHFNLKHFPKSALESEADYVVQSYHKTLPTLTMGSVLFIHKNAPLKDEVIKYLGIFQTSSPSYLVMSSIELAHQFYNSYDSSLFFEKRKQLIETLRQQHFEVIEVEDPLKLIVRANGHTGLEVQRYFEKNHIYIELANDYQILIVLPLWHFNDRYPFKTLLHRIKTIKLPKKAKEKLEPVLLPLEKSVYVSKYINHAYWININKAQDKVLAQHIVPYPPGIPVFWKGEKVTKNMIKLMQYYLSHSVRVEGIKNDKILVKDE . . . . . . . GCA_005502385.1|SCOV01000016.1 Prodigal:002006 CDS 35920 37257 . - 0 GCA_005502385.1_00434 GCA_005502385.1_00434_gene,GCA_005502385.1_00434_mRNA GCA_005502385.1_00434 Arginine decarboxylase GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 MKLPITQKLDDLIHHYAISLHVPGHKNMTIGYLDALSLKMDMTEITGLDDLHHPEDTILESMNRVNKHPNYDAYYLVNGTTSGILSVIQAFTHIKGRYLISRNVHKSVFNALDLTQQSADILPMYRSDKSYQYLAPLIDTKMLRHQKLAVVTYPNYYGECFDIKQCVKQFHDYNIPVLVDEAHGAHFNLKHFPKSALESEADYVVQSYHKTLPTLTMGSVLFIHKNAPLKDEVIKYLGIFQTSSPSYLVMSSIELAHQFYNSYDSSLFFEKRKQLIETLRQQHFEVIEVEDPLKLIVRANGHTGLEVQRYFEKNHIYIELANDYQILIVLPLWHFNDRYPFKTLLHRIKTIKLPKKAKEKLEPVLLPLEKSVYVSKYINHAYWININKAQDKVLAQHIVPYPPGIPVFWKGEKVTKNMIKLMQYYLSHSVRVEGIKNDKILVKDE persistent 445 Aminotransferase class V-fold PLP-dependent enzyme UniRef50_S2X7A8,UniRef90_A0A8X8GSB7 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka gene 37455 37564 . - . GCA_005502385.1_00435_gene GCA_005502385.1_00435 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 . . . . . . . GCA_005502385.1|SCOV01000016.1 prokka mRNA 37455 37564 . - . GCA_005502385.1_00435_mRNA GCA_005502385.1_00435 GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 . . . . . . . GCA_005502385.1|SCOV01000016.1 barrnap:0.9 rRNA 37455 37564 2.8e-11 - . GCA_005502385.1_00435 GCA_005502385.1_00435_gene,GCA_005502385.1_00435_mRNA GCA_005502385.1_00435 5S ribosomal RNA GCA_005502385.1 SCOV01000016.1 GCA_005502385.1|SCOV01000016.1 GCA_005502385.1_SCOV01000016.1 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 304 876 . - . GCA_005502385.1_00436_gene GCA_005502385.1_00436 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MKREIMEWVISIVVGLLVVIVVTKFIGESYTVSGSSMHPTFQDRNKVIVSKISKSMNHIDNGDVVVFHEDSKRDFIKRVIGTPGDTVEYKGDQLYVNNKKVSEPYLDYNKKHKQGQYLTGSFKSSQIKGSNGEMKLPKDKYLVLGDNRQNSIDSRFDVVGLVDKKQLVGKVVWRYWPFNEWKTNFNPGTF . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 304 876 . - . GCA_005502385.1_00436_mRNA GCA_005502385.1_00436 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MKREIMEWVISIVVGLLVVIVVTKFIGESYTVSGSSMHPTFQDRNKVIVSKISKSMNHIDNGDVVVFHEDSKRDFIKRVIGTPGDTVEYKGDQLYVNNKKVSEPYLDYNKKHKQGQYLTGSFKSSQIKGSNGEMKLPKDKYLVLGDNRQNSIDSRFDVVGLVDKKQLVGKVVWRYWPFNEWKTNFNPGTF . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 304 876 . - 0 GCA_005502385.1_00436 GCA_005502385.1_00436_gene,GCA_005502385.1_00436_mRNA GCA_005502385.1_00436 Signal peptidase IB GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MKREIMEWVISIVVGLLVVIVVTKFIGESYTVSGSSMHPTFQDRNKVIVSKISKSMNHIDNGDVVVFHEDSKRDFIKRVIGTPGDTVEYKGDQLYVNNKKVSEPYLDYNKKHKQGQYLTGSFKSSQIKGSNGEMKLPKDKYLVLGDNRQNSIDSRFDVVGLVDKKQLVGKVVWRYWPFNEWKTNFNPGTF persistent 190 lepB signal peptidase I 3.4.21.89 GO:0004252,GO:0006465,GO:0009306,GO:0016020 WP_017175636.1 UPI0002DB4676 UniRef100_A0A8X8GY43,UniRef50_A0A2A1KB19,UniRef90_A0A8X8GY43 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 1089 1490 . + . GCA_005502385.1_00437_gene GCA_005502385.1_00437 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MKLLLRIILTILVIIVVIIGGLFGLNAYSDQHPNNRSINDWNKLNPLAPTHEYYVKTQKPSKVEVVDKEKDFYIYHYNQTGYTKDGKAKNIDYTASKKLKQHHYLVVSEKSHTITSYKEVKQSDIPTKAKEKL . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 1089 1490 . + . GCA_005502385.1_00437_mRNA GCA_005502385.1_00437 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MKLLLRIILTILVIIVVIIGGLFGLNAYSDQHPNNRSINDWNKLNPLAPTHEYYVKTQKPSKVEVVDKEKDFYIYHYNQTGYTKDGKAKNIDYTASKKLKQHHYLVVSEKSHTITSYKEVKQSDIPTKAKEKL . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 1089 1490 . + 0 GCA_005502385.1_00437 GCA_005502385.1_00437_gene,GCA_005502385.1_00437_mRNA GCA_005502385.1_00437 hypothetical protein GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MKLLLRIILTILVIIVVIIGGLFGLNAYSDQHPNNRSINDWNKLNPLAPTHEYYVKTQKPSKVEVVDKEKDFYIYHYNQTGYTKDGKAKNIDYTASKKLKQHHYLVVSEKSHTITSYKEVKQSDIPTKAKEKL persistent 133 yxeA YxeA family protein UniRef50_A0A2K0AW72,UniRef90_A0AAE5MY79 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 1514 2272 . + . GCA_005502385.1_00438_gene GCA_005502385.1_00438 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MPILNVNHVSKIYGTKQKFKALHDINFSVDKGEFVAIMGPSGSGKTTLLNVISSIDSISGGTVEISGNEINQLSNKKLAQFRKKELGFIFQDYSVLPTLTVKENIMLPLSVQKMKKDEMEKNYQDVTEALGIYDLSDKYPSEISGGQQQRTAAARAFVHQPSIIFADEPTGALDSKSAQDLLHRLEDMNKQFNSTIIMVTHDPSAASFAQRVIMLKDGDIHSEILQQSKTKSKFYNEIIQLQSALGGVANDV . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 1514 2272 . + . GCA_005502385.1_00438_mRNA GCA_005502385.1_00438 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MPILNVNHVSKIYGTKQKFKALHDINFSVDKGEFVAIMGPSGSGKTTLLNVISSIDSISGGTVEISGNEINQLSNKKLAQFRKKELGFIFQDYSVLPTLTVKENIMLPLSVQKMKKDEMEKNYQDVTEALGIYDLSDKYPSEISGGQQQRTAAARAFVHQPSIIFADEPTGALDSKSAQDLLHRLEDMNKQFNSTIIMVTHDPSAASFAQRVIMLKDGDIHSEILQQSKTKSKFYNEIIQLQSALGGVANDV . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 1514 2272 . + 0 GCA_005502385.1_00438 GCA_005502385.1_00438_gene,GCA_005502385.1_00438_mRNA GCA_005502385.1_00438 Bacitracin export ATP-binding protein BceA GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MPILNVNHVSKIYGTKQKFKALHDINFSVDKGEFVAIMGPSGSGKTTLLNVISSIDSISGGTVEISGNEINQLSNKKLAQFRKKELGFIFQDYSVLPTLTVKENIMLPLSVQKMKKDEMEKNYQDVTEALGIYDLSDKYPSEISGGQQQRTAAARAFVHQPSIIFADEPTGALDSKSAQDLLHRLEDMNKQFNSTIIMVTHDPSAASFAQRVIMLKDGDIHSEILQQSKTKSKFYNEIIQLQSALGGVANDV persistent 252 ABC transporter ATP-binding protein WP_019834700.1 UPI00037E36B2 UniRef100_UPI00037E36B2,UniRef50_O34697,UniRef90_A0A3S7GXX5 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 2262 4142 . + . GCA_005502385.1_00439_gene GCA_005502385.1_00439 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MTFNQITLKNLKSNIKHYVLYLFSLILSIILYFSFVTLQYTHSLNNGSSKIINQGAKVGSVFLFITIIIFLMYANHLFIKRRTREFALFELIGLTRGNILRMLAIEQITLFISTGIIGVIVGILGSKLLLSILIKLMHLHIHASIGFEVTALIQTIIMLMLAFILIMLEDAIFLKRRTILSMMKDSMKTEAVKAKITTPECIAGILGLIMIMLGYYMSTEMFGKFQELTMALLTPFIILFLTVAGAYLFFRSSVSIIFKSLKKSKHGRVSITDVVFTSSIMYRMKKNAMSLTIITVISAVTVTILCFGAISKANADFNIQSSSPQDINFTKVKMAQQFEHQLNQHGIPYTKKTYENANTHIIENDVIKSKTGNAMQNESISIMADPHIKGNHATITNLQGPLSMMFNVQIHKDLKLKGQQVKTFYVDKKDLNEIIPMDASLGGPVLKISADNYNALKTKNQLTHHYGFNIKHHSDLSKAETLAKKGKQNVVLKSENKKAIDESNGILIFVTSFLGLAFLVAAGCIIYIKQMDETEDEINHYRILRRIGFTNTDMIKGLALKIIFNFGLPLVVSLLHAFFAANAFMMLIGNYTLTPIFIVMVIYSLVYLIFAVISFIHSERIIKDAI . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 2262 4142 . + . GCA_005502385.1_00439_mRNA GCA_005502385.1_00439 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MTFNQITLKNLKSNIKHYVLYLFSLILSIILYFSFVTLQYTHSLNNGSSKIINQGAKVGSVFLFITIIIFLMYANHLFIKRRTREFALFELIGLTRGNILRMLAIEQITLFISTGIIGVIVGILGSKLLLSILIKLMHLHIHASIGFEVTALIQTIIMLMLAFILIMLEDAIFLKRRTILSMMKDSMKTEAVKAKITTPECIAGILGLIMIMLGYYMSTEMFGKFQELTMALLTPFIILFLTVAGAYLFFRSSVSIIFKSLKKSKHGRVSITDVVFTSSIMYRMKKNAMSLTIITVISAVTVTILCFGAISKANADFNIQSSSPQDINFTKVKMAQQFEHQLNQHGIPYTKKTYENANTHIIENDVIKSKTGNAMQNESISIMADPHIKGNHATITNLQGPLSMMFNVQIHKDLKLKGQQVKTFYVDKKDLNEIIPMDASLGGPVLKISADNYNALKTKNQLTHHYGFNIKHHSDLSKAETLAKKGKQNVVLKSENKKAIDESNGILIFVTSFLGLAFLVAAGCIIYIKQMDETEDEINHYRILRRIGFTNTDMIKGLALKIIFNFGLPLVVSLLHAFFAANAFMMLIGNYTLTPIFIVMVIYSLVYLIFAVISFIHSERIIKDAI . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 2262 4142 . + 0 GCA_005502385.1_00439 GCA_005502385.1_00439_gene,GCA_005502385.1_00439_mRNA GCA_005502385.1_00439 Bacitracin export permease protein BceB GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MTFNQITLKNLKSNIKHYVLYLFSLILSIILYFSFVTLQYTHSLNNGSSKIINQGAKVGSVFLFITIIIFLMYANHLFIKRRTREFALFELIGLTRGNILRMLAIEQITLFISTGIIGVIVGILGSKLLLSILIKLMHLHIHASIGFEVTALIQTIIMLMLAFILIMLEDAIFLKRRTILSMMKDSMKTEAVKAKITTPECIAGILGLIMIMLGYYMSTEMFGKFQELTMALLTPFIILFLTVAGAYLFFRSSVSIIFKSLKKSKHGRVSITDVVFTSSIMYRMKKNAMSLTIITVISAVTVTILCFGAISKANADFNIQSSSPQDINFTKVKMAQQFEHQLNQHGIPYTKKTYENANTHIIENDVIKSKTGNAMQNESISIMADPHIKGNHATITNLQGPLSMMFNVQIHKDLKLKGQQVKTFYVDKKDLNEIIPMDASLGGPVLKISADNYNALKTKNQLTHHYGFNIKHHSDLSKAETLAKKGKQNVVLKSENKKAIDESNGILIFVTSFLGLAFLVAAGCIIYIKQMDETEDEINHYRILRRIGFTNTDMIKGLALKIIFNFGLPLVVSLLHAFFAANAFMMLIGNYTLTPIFIVMVIYSLVYLIFAVISFIHSERIIKDAI persistent 626 Bacitracin ABC transporter permease WP_049434328.1 UPI00066ECA0D UniRef100_UPI00066ECA0D,UniRef50_Q9KWJ6,UniRef90_A0A3S7GZ45 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 4169 4360 . + . GCA_005502385.1_00440_gene GCA_005502385.1_00440 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MTIKEMIQHAYDDLLSLKVNWFNGIMLALIVLVASSITTPFIGVPVGLLGGGYILKRYEENKH . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 4169 4360 . + . GCA_005502385.1_00440_mRNA GCA_005502385.1_00440 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MTIKEMIQHAYDDLLSLKVNWFNGIMLALIVLVASSITTPFIGVPVGLLGGGYILKRYEENKH . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 4169 4360 . + 0 GCA_005502385.1_00440 GCA_005502385.1_00440_gene,GCA_005502385.1_00440_mRNA GCA_005502385.1_00440 hypothetical protein GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MTIKEMIQHAYDDLLSLKVNWFNGIMLALIVLVASSITTPFIGVPVGLLGGGYILKRYEENKH persistent 63 vraH VraH family protein WP_048762522.1 UPI000660469F UniRef100_UPI000660469F,UniRef50_A0A028ZH42,UniRef90_A0A974QNM5 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 4403 4945 . - . GCA_005502385.1_00441_gene GCA_005502385.1_00441 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MAGRPKDPTINEKIFKEIDQLLETTYFRDMTIDQISENTGVSKATIYRRWKDKSSIIVDMFVSRIHVFENDYKTMYDELYHFLIRVMNIYQTHLGRAVIEILISYQQSEARDIFMKGYFDSNRKILKTIISKYIDEADQDLFIDLIFSPIYFNILIKPNVLNEAYIKKLLKVILDAYNVE . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 4403 4945 . - . GCA_005502385.1_00441_mRNA GCA_005502385.1_00441 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MAGRPKDPTINEKIFKEIDQLLETTYFRDMTIDQISENTGVSKATIYRRWKDKSSIIVDMFVSRIHVFENDYKTMYDELYHFLIRVMNIYQTHLGRAVIEILISYQQSEARDIFMKGYFDSNRKILKTIISKYIDEADQDLFIDLIFSPIYFNILIKPNVLNEAYIKKLLKVILDAYNVE . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 4403 4945 . - 0 GCA_005502385.1_00441 GCA_005502385.1_00441_gene,GCA_005502385.1_00441_mRNA GCA_005502385.1_00441 hypothetical protein GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MAGRPKDPTINEKIFKEIDQLLETTYFRDMTIDQISENTGVSKATIYRRWKDKSSIIVDMFVSRIHVFENDYKTMYDELYHFLIRVMNIYQTHLGRAVIEILISYQQSEARDIFMKGYFDSNRKILKTIISKYIDEADQDLFIDLIFSPIYFNILIKPNVLNEAYIKKLLKVILDAYNVE persistent 180 TetR/AcrR family transcriptional regulator WP_017175630.1 UPI0002D3190D UniRef100_A0A8X8KKW4,UniRef50_S2XY57,UniRef90_A0A8X8KKW4 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 4911 5306 . - . GCA_005502385.1_00442_gene GCA_005502385.1_00442 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MKLTFIKFLVGGLAVMLSYIISVMLPWKELGGVFATLPAVFLVSLFITGMQHGDVVAKHVSRGAVFGMTGVLCSILATWAMLYSTHEWLLSILVGFVVWFISAVIIFEIVEFISRLRRRKDGWKTERSNNQ . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 4911 5306 . - . GCA_005502385.1_00442_mRNA GCA_005502385.1_00442 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MKLTFIKFLVGGLAVMLSYIISVMLPWKELGGVFATLPAVFLVSLFITGMQHGDVVAKHVSRGAVFGMTGVLCSILATWAMLYSTHEWLLSILVGFVVWFISAVIIFEIVEFISRLRRRKDGWKTERSNNQ . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 4911 5306 . - 0 GCA_005502385.1_00442 GCA_005502385.1_00442_gene,GCA_005502385.1_00442_mRNA GCA_005502385.1_00442 hypothetical protein GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MKLTFIKFLVGGLAVMLSYIISVMLPWKELGGVFATLPAVFLVSLFITGMQHGDVVAKHVSRGAVFGMTGVLCSILATWAMLYSTHEWLLSILVGFVVWFISAVIIFEIVEFISRLRRRKDGWKTERSNNQ persistent 131 DUF3147 domain-containing protein WP_017175629.1 UPI00031E3C83 UniRef100_A0A8X8GT20,UniRef50_Q2FUQ7,UniRef90_A0A8X8GT20 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 5325 5687 . - . GCA_005502385.1_00443_gene GCA_005502385.1_00443 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MFGISISSAILHFVIGGIAVAFASIMAEKVGGKMGGIIATMPAVYLAAIIALAIDHRREQLIQMSIHLSSGAIIGIISCIITVFITSIYINKRDYKKGTAFAFICWLVISIAIFAVRHIS . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 5325 5687 . - . GCA_005502385.1_00443_mRNA GCA_005502385.1_00443 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MFGISISSAILHFVIGGIAVAFASIMAEKVGGKMGGIIATMPAVYLAAIIALAIDHRREQLIQMSIHLSSGAIIGIISCIITVFITSIYINKRDYKKGTAFAFICWLVISIAIFAVRHIS . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 5325 5687 . - 0 GCA_005502385.1_00443 GCA_005502385.1_00443_gene,GCA_005502385.1_00443_mRNA GCA_005502385.1_00443 hypothetical protein GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MFGISISSAILHFVIGGIAVAFASIMAEKVGGKMGGIIATMPAVYLAAIIALAIDHRREQLIQMSIHLSSGAIIGIISCIITVFITSIYINKRDYKKGTAFAFICWLVISIAIFAVRHIS persistent 120 DUF3147 domain-containing protein UniRef50_Q2FUQ6,UniRef90_A0AAE5JK74 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 5858 6697 . - . GCA_005502385.1_00444_gene GCA_005502385.1_00444 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MKKPFSKLFGLKNKEDIVDYIEENRHSSVESIQIERIVPNRYQPRQVFDSSKITELAESIEEHGLLQPIVVRPIEENMYEIIAGERRFRALQSLHQSKADVIIRHMNDEETAVVALIENIQRENLSAIEEAEAYKKLLEIGQTTQSELAQSLGKSQSFIANKLRLLKLAPKVIVRLREGKITERHARAVLSLKEADQEQLIEQVIAQKLNVKQTEARVKQKLGPEKVKAKTFQFSKDLTQARDEVGKSIQAIEDSGIHVEHRDKDHEDYYEIKIKLYKR . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 5858 6697 . - . GCA_005502385.1_00444_mRNA GCA_005502385.1_00444 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MKKPFSKLFGLKNKEDIVDYIEENRHSSVESIQIERIVPNRYQPRQVFDSSKITELAESIEEHGLLQPIVVRPIEENMYEIIAGERRFRALQSLHQSKADVIIRHMNDEETAVVALIENIQRENLSAIEEAEAYKKLLEIGQTTQSELAQSLGKSQSFIANKLRLLKLAPKVIVRLREGKITERHARAVLSLKEADQEQLIEQVIAQKLNVKQTEARVKQKLGPEKVKAKTFQFSKDLTQARDEVGKSIQAIEDSGIHVEHRDKDHEDYYEIKIKLYKR . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 5858 6697 . - 0 GCA_005502385.1_00444 GCA_005502385.1_00444_gene,GCA_005502385.1_00444_mRNA GCA_005502385.1_00444 Nucleoid occlusion protein GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MKKPFSKLFGLKNKEDIVDYIEENRHSSVESIQIERIVPNRYQPRQVFDSSKITELAESIEEHGLLQPIVVRPIEENMYEIIAGERRFRALQSLHQSKADVIIRHMNDEETAVVALIENIQRENLSAIEEAEAYKKLLEIGQTTQSELAQSLGKSQSFIANKLRLLKLAPKVIVRLREGKITERHARAVLSLKEADQEQLIEQVIAQKLNVKQTEARVKQKLGPEKVKAKTFQFSKDLTQARDEVGKSIQAIEDSGIHVEHRDKDHEDYYEIKIKLYKR persistent 279 noc nucleoid occlusion protein GO:0032466,GO:0043565 COG1475,D WP_017175627.1 UPI0002DEB676 UniRef100_A0A8X8GQB5,UniRef50_A0A6N3FL57,UniRef90_A0A023UE48 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 6751 7473 . - . GCA_005502385.1_00445_gene GCA_005502385.1_00445 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MSGIEWLTKALSEQGIELTDQQQQQFQTYYRLLVEWNEKMNLTSITDEHEVYLKHFYDSITAGFYYDFNQPLTLCDVGAGAGFPSIPLKIVFPELKVTIVDSLNKRIQFLNHLAVELGLTQVSFVHDRAETFGKGVNRETYDVVTARAVARLTVLSELCLPLVKKGGQFIALKSAKGEEELAEAQFGISILGGAFSDSYTFDLPEDAGERQMIIVDKRRQTPKKYPRKPGTPNKAPLLEN . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 6751 7473 . - . GCA_005502385.1_00445_mRNA GCA_005502385.1_00445 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MSGIEWLTKALSEQGIELTDQQQQQFQTYYRLLVEWNEKMNLTSITDEHEVYLKHFYDSITAGFYYDFNQPLTLCDVGAGAGFPSIPLKIVFPELKVTIVDSLNKRIQFLNHLAVELGLTQVSFVHDRAETFGKGVNRETYDVVTARAVARLTVLSELCLPLVKKGGQFIALKSAKGEEELAEAQFGISILGGAFSDSYTFDLPEDAGERQMIIVDKRRQTPKKYPRKPGTPNKAPLLEN . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 6751 7473 . - 0 GCA_005502385.1_00445 GCA_005502385.1_00445_gene,GCA_005502385.1_00445_mRNA GCA_005502385.1_00445 Ribosomal RNA small subunit methyltransferase G GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MSGIEWLTKALSEQGIELTDQQQQQFQTYYRLLVEWNEKMNLTSITDEHEVYLKHFYDSITAGFYYDFNQPLTLCDVGAGAGFPSIPLKIVFPELKVTIVDSLNKRIQFLNHLAVELGLTQVSFVHDRAETFGKGVNRETYDVVTARAVARLTVLSELCLPLVKKGGQFIALKSAKGEEELAEAQFGISILGGAFSDSYTFDLPEDAGERQMIIVDKRRQTPKKYPRKPGTPNKAPLLEN persistent 240 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 2.1.1.-,2.1.1.170 GO:0005829,GO:0008168,GO:0031167,GO:0046118,GO:0070043 COG0357,J WP_002447968.1 UPI00019FC41B UniRef100_A0AAE5JLD7,UniRef50_P25813,UniRef90_Q4L2Z4 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 7473 9350 . - . GCA_005502385.1_00446_gene GCA_005502385.1_00446 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MVQEYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREIDALGGQMAKAIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEDNLDIMQGMVDELLIENDEVKGVRTNIGTEYHAKAVVITTGTFLRGEIILGNMKYSSGPNHQLPSISLADNLRELGFEVVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLTYTNDRTHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTNEVYVQGLSTSLPEHVQRQMLATIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNLYTAGQINGTSGYEEAAGQGIMAGINAAGNVLGTGEKILSRSDAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTDIGYNLGMISEERYARFNDKRQQIQDEIDRLSNIRIKPNEHTQSVIEAHGGSRLKDGILAIDLLRRPEMTYNTILEILEETHQLPEAVEEQVEIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKVDSLATEAREKLSEVKPLNIAQASRISGVNPADISILLVYLEQGKLQRVKN . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 7473 9350 . - . GCA_005502385.1_00446_mRNA GCA_005502385.1_00446 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MVQEYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREIDALGGQMAKAIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEDNLDIMQGMVDELLIENDEVKGVRTNIGTEYHAKAVVITTGTFLRGEIILGNMKYSSGPNHQLPSISLADNLRELGFEVVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLTYTNDRTHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTNEVYVQGLSTSLPEHVQRQMLATIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNLYTAGQINGTSGYEEAAGQGIMAGINAAGNVLGTGEKILSRSDAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTDIGYNLGMISEERYARFNDKRQQIQDEIDRLSNIRIKPNEHTQSVIEAHGGSRLKDGILAIDLLRRPEMTYNTILEILEETHQLPEAVEEQVEIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKVDSLATEAREKLSEVKPLNIAQASRISGVNPADISILLVYLEQGKLQRVKN . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 7473 9350 . - 0 GCA_005502385.1_00446 GCA_005502385.1_00446_gene,GCA_005502385.1_00446_mRNA GCA_005502385.1_00446 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MVQEYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREIDALGGQMAKAIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEDNLDIMQGMVDELLIENDEVKGVRTNIGTEYHAKAVVITTGTFLRGEIILGNMKYSSGPNHQLPSISLADNLRELGFEVVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLTYTNDRTHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTNEVYVQGLSTSLPEHVQRQMLATIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNLYTAGQINGTSGYEEAAGQGIMAGINAAGNVLGTGEKILSRSDAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTDIGYNLGMISEERYARFNDKRQQIQDEIDRLSNIRIKPNEHTQSVIEAHGGSRLKDGILAIDLLRRPEMTYNTILEILEETHQLPEAVEEQVEIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKVDSLATEAREKLSEVKPLNIAQASRISGVNPADISILLVYLEQGKLQRVKN persistent 625 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG GO:0002098,GO:0005829,GO:0008033,GO:0030488,GO:0050660 COG0445,J WP_049434326.1 UPI00066A9EF0 UniRef100_UPI00066A9EF0,UniRef50_Q2FUQ3,UniRef90_Q2FUQ3 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 9421 10800 . - . GCA_005502385.1_00447_gene GCA_005502385.1_00447 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MDFDTITSISTPMGEGAIGIVRLSGPEAVEIGDKLYKGKKKLKDVPSHTINYGHIIDPETDEVVEEVMISVLRAPKTFTREDIIEINCHGGILTINRILELTMTHGARMAEPGEYTKRAFLNGRIDLSQAEAVMDFIRSKTDRASKVAMNQIEGRLSDLIKRQRQSILEILAQVEVNIDYPEYDDVEDATTEFLLAQSKKIKNEIDQLLETGTQGKIMREGLSTVIVGKPNVGKSSMLNNLIQDNKAIVTEVAGTTRDVLEEYVNVRGVPLRLIDTAGIRDTEDIVEKIGVERSRKALSEADLILFVLNNNEPLTDEDRTLYEVIKNEDAIVIVNKTDLERRLDIEEVKTMIGNTPLIQTSMLKQEGIDELELQIRDLFFGGEVQNQDMTYVSNSRHISLLKQARQTIQDAIDAAEAGIPMDMVQIDLTRTWEILGEIIGESASDELINQLFSQFCLGK . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 9421 10800 . - . GCA_005502385.1_00447_mRNA GCA_005502385.1_00447 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MDFDTITSISTPMGEGAIGIVRLSGPEAVEIGDKLYKGKKKLKDVPSHTINYGHIIDPETDEVVEEVMISVLRAPKTFTREDIIEINCHGGILTINRILELTMTHGARMAEPGEYTKRAFLNGRIDLSQAEAVMDFIRSKTDRASKVAMNQIEGRLSDLIKRQRQSILEILAQVEVNIDYPEYDDVEDATTEFLLAQSKKIKNEIDQLLETGTQGKIMREGLSTVIVGKPNVGKSSMLNNLIQDNKAIVTEVAGTTRDVLEEYVNVRGVPLRLIDTAGIRDTEDIVEKIGVERSRKALSEADLILFVLNNNEPLTDEDRTLYEVIKNEDAIVIVNKTDLERRLDIEEVKTMIGNTPLIQTSMLKQEGIDELELQIRDLFFGGEVQNQDMTYVSNSRHISLLKQARQTIQDAIDAAEAGIPMDMVQIDLTRTWEILGEIIGESASDELINQLFSQFCLGK . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 9421 10800 . - 0 GCA_005502385.1_00447 GCA_005502385.1_00447_gene,GCA_005502385.1_00447_mRNA GCA_005502385.1_00447 tRNA modification GTPase MnmE GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MDFDTITSISTPMGEGAIGIVRLSGPEAVEIGDKLYKGKKKLKDVPSHTINYGHIIDPETDEVVEEVMISVLRAPKTFTREDIIEINCHGGILTINRILELTMTHGARMAEPGEYTKRAFLNGRIDLSQAEAVMDFIRSKTDRASKVAMNQIEGRLSDLIKRQRQSILEILAQVEVNIDYPEYDDVEDATTEFLLAQSKKIKNEIDQLLETGTQGKIMREGLSTVIVGKPNVGKSSMLNNLIQDNKAIVTEVAGTTRDVLEEYVNVRGVPLRLIDTAGIRDTEDIVEKIGVERSRKALSEADLILFVLNNNEPLTDEDRTLYEVIKNEDAIVIVNKTDLERRLDIEEVKTMIGNTPLIQTSMLKQEGIDELELQIRDLFFGGEVQNQDMTYVSNSRHISLLKQARQTIQDAIDAAEAGIPMDMVQIDLTRTWEILGEIIGESASDELINQLFSQFCLGK persistent 459 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 3.6.-.- GO:0002098,GO:0003924,GO:0005525,GO:0005829,GO:0006400,GO:0030488,GO:0046872 COG0486,J UniRef50_Q8DPZ8,UniRef90_Q2FUQ2 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 10941 11285 . - . GCA_005502385.1_00448_gene GCA_005502385.1_00448 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MEKAYRIKRNSEFQKIYKKGKSVANRQFVVYTLNNEYEHFRLGISVSKKIGNAVTRNRIKRAIRENFKVHKQDMISKDIIVIARQPAKNMSTLEIQGSLEHVLKIAKVFNKRIK . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 10941 11285 . - . GCA_005502385.1_00448_mRNA GCA_005502385.1_00448 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MEKAYRIKRNSEFQKIYKKGKSVANRQFVVYTLNNEYEHFRLGISVSKKIGNAVTRNRIKRAIRENFKVHKQDMISKDIIVIARQPAKNMSTLEIQGSLEHVLKIAKVFNKRIK . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 10941 11285 . - 0 GCA_005502385.1_00448 GCA_005502385.1_00448_gene,GCA_005502385.1_00448_mRNA GCA_005502385.1_00448 Ribonuclease P protein component GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MEKAYRIKRNSEFQKIYKKGKSVANRQFVVYTLNNEYEHFRLGISVSKKIGNAVTRNRIKRAIRENFKVHKQDMISKDIIVIARQPAKNMSTLEIQGSLEHVLKIAKVFNKRIK persistent 114 rnpA ribonuclease P protein component 3.1.26.5 GO:0000049,GO:0004526,GO:0008033 WP_017175623.1 UPI0002F4DBEE UniRef100_A0A8X8GRY3,UniRef50_Q2FUQ1,UniRef90_A0A8X8GRY3 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 11384 11521 . - . GCA_005502385.1_00449_gene GCA_005502385.1_00449 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MVKRTYQPNKRKHSKVHGFRKRMSTKNGRKVLARRRRKGRKVLSA . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 11384 11521 . - . GCA_005502385.1_00449_mRNA GCA_005502385.1_00449 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MVKRTYQPNKRKHSKVHGFRKRMSTKNGRKVLARRRRKGRKVLSA . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 11384 11521 . - 0 GCA_005502385.1_00449 GCA_005502385.1_00449_gene,GCA_005502385.1_00449_mRNA GCA_005502385.1_00449 50S ribosomal protein L34 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MVKRTYQPNKRKHSKVHGFRKRMSTKNGRKVLARRRRKGRKVLSA persistent 45 rpmH 50S ribosomal protein L34 GO:0000315,GO:0003735,GO:0005840,GO:0006412,GO:0022625,GO:1990904 COG0230,J WP_000240855.1 UPI0000133FD1 UniRef100_Q2FUQ0,UniRef50_A5VMV2,UniRef90_Q2FUQ0 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 12214 13566 . + . GCA_005502385.1_00450_gene GCA_005502385.1_00450 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MSEQEIWKKVLEVAESEISKTTFNTFLKDTELKEIRDNVAYIFVIHEFYADWLNSNYKDVIQTIMKDIIGYEVDPKFYTAEQLAELDETSRNQSNTVNKTSAIDDSHDDIDQFNTHNTFDTFVIGPGNRFPHAASLAVAEAPAQAYNPLFIYGGVGLGKTHLMHAIGHHVLSNKPNAKVLYTSSEKFTNDFIKSIRNNEPEAFREKYRNIDVLLIDDIQFIQNKEQTQEEFFHTFNELHQNKKQIVISSDRPPKEIAKLEDRLRSRFEWGLIVDITPPDYETRMAILQKKIEEENLEIPAEALNYIANQIQSNIRELEGALTRLLAYSKLQGKPITTELAAEALKDIIQVPKSKKISIQDIQKVVGHYYNVRIEDFSAKKRTKSIAYPRQIAMYLSRELTDFSLPKIGEEFGGRDHTTVIHAHEKISNDIKADPIFKQEVEDLEKEIRKQ . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 12214 13566 . + . GCA_005502385.1_00450_mRNA GCA_005502385.1_00450 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MSEQEIWKKVLEVAESEISKTTFNTFLKDTELKEIRDNVAYIFVIHEFYADWLNSNYKDVIQTIMKDIIGYEVDPKFYTAEQLAELDETSRNQSNTVNKTSAIDDSHDDIDQFNTHNTFDTFVIGPGNRFPHAASLAVAEAPAQAYNPLFIYGGVGLGKTHLMHAIGHHVLSNKPNAKVLYTSSEKFTNDFIKSIRNNEPEAFREKYRNIDVLLIDDIQFIQNKEQTQEEFFHTFNELHQNKKQIVISSDRPPKEIAKLEDRLRSRFEWGLIVDITPPDYETRMAILQKKIEEENLEIPAEALNYIANQIQSNIRELEGALTRLLAYSKLQGKPITTELAAEALKDIIQVPKSKKISIQDIQKVVGHYYNVRIEDFSAKKRTKSIAYPRQIAMYLSRELTDFSLPKIGEEFGGRDHTTVIHAHEKISNDIKADPIFKQEVEDLEKEIRKQ . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 12214 13566 . + 0 GCA_005502385.1_00450 GCA_005502385.1_00450_gene,GCA_005502385.1_00450_mRNA GCA_005502385.1_00450 Chromosomal replication initiator protein DnaA GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MSEQEIWKKVLEVAESEISKTTFNTFLKDTELKEIRDNVAYIFVIHEFYADWLNSNYKDVIQTIMKDIIGYEVDPKFYTAEQLAELDETSRNQSNTVNKTSAIDDSHDDIDQFNTHNTFDTFVIGPGNRFPHAASLAVAEAPAQAYNPLFIYGGVGLGKTHLMHAIGHHVLSNKPNAKVLYTSSEKFTNDFIKSIRNNEPEAFREKYRNIDVLLIDDIQFIQNKEQTQEEFFHTFNELHQNKKQIVISSDRPPKEIAKLEDRLRSRFEWGLIVDITPPDYETRMAILQKKIEEENLEIPAEALNYIANQIQSNIRELEGALTRLLAYSKLQGKPITTELAAEALKDIIQVPKSKKISIQDIQKVVGHYYNVRIEDFSAKKRTKSIAYPRQIAMYLSRELTDFSLPKIGEEFGGRDHTTVIHAHEKISNDIKADPIFKQEVEDLEKEIRKQ persistent 450 dnaA chromosomal replication initiator protein DnaA GO:0003677,GO:0003688,GO:0005524,GO:0005737,GO:0005886,GO:0006270,GO:0006275,GO:0016887 COG0593,L WP_019834695.1 UPI00036E5526 UniRef100_UPI00036E5526,UniRef50_Q2G2H5,UniRef90_Q4LAL5 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 13859 14989 . + . GCA_005502385.1_00451_gene GCA_005502385.1_00451 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MEFTIKRDYFITQLNDTLKAISPRTTLPILTGIKIDAKDNNVILTGSDSEISIEITIPKQVDGEDIVDITETGSVVLPGRFFVDIIKKLPGKDVKLSTNEQFQTLITSGHSEFNLSGLDPEQYPLLPQVSRDDAIQLSVKVLKNIIAQTNFAVSTSETRPVLTGVNWLIQDNELICTATDSHRLAVRKLKLEDESENKNVIIPGKALSELNKIMSDNDEDIDIFFASNQVLFKVGNVNFISRLLEGHYPDTTRLFPENYEIKLGLDNGEFYHAIDRASLLAREGGNNVIKLSTGNEVVELSSTSPEIGTVKEEVTATDVEGGNLKISFNSKYMMDALKAIDNDEVEVEFFGTMKPFILKPKADDSVTQLILPIRTY . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 13859 14989 . + . GCA_005502385.1_00451_mRNA GCA_005502385.1_00451 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MEFTIKRDYFITQLNDTLKAISPRTTLPILTGIKIDAKDNNVILTGSDSEISIEITIPKQVDGEDIVDITETGSVVLPGRFFVDIIKKLPGKDVKLSTNEQFQTLITSGHSEFNLSGLDPEQYPLLPQVSRDDAIQLSVKVLKNIIAQTNFAVSTSETRPVLTGVNWLIQDNELICTATDSHRLAVRKLKLEDESENKNVIIPGKALSELNKIMSDNDEDIDIFFASNQVLFKVGNVNFISRLLEGHYPDTTRLFPENYEIKLGLDNGEFYHAIDRASLLAREGGNNVIKLSTGNEVVELSSTSPEIGTVKEEVTATDVEGGNLKISFNSKYMMDALKAIDNDEVEVEFFGTMKPFILKPKADDSVTQLILPIRTY . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 13859 14989 . + 0 GCA_005502385.1_00451 GCA_005502385.1_00451_gene,GCA_005502385.1_00451_mRNA GCA_005502385.1_00451 Beta sliding clamp GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MEFTIKRDYFITQLNDTLKAISPRTTLPILTGIKIDAKDNNVILTGSDSEISIEITIPKQVDGEDIVDITETGSVVLPGRFFVDIIKKLPGKDVKLSTNEQFQTLITSGHSEFNLSGLDPEQYPLLPQVSRDDAIQLSVKVLKNIIAQTNFAVSTSETRPVLTGVNWLIQDNELICTATDSHRLAVRKLKLEDESENKNVIIPGKALSELNKIMSDNDEDIDIFFASNQVLFKVGNVNFISRLLEGHYPDTTRLFPENYEIKLGLDNGEFYHAIDRASLLAREGGNNVIKLSTGNEVVELSSTSPEIGTVKEEVTATDVEGGNLKISFNSKYMMDALKAIDNDEVEVEFFGTMKPFILKPKADDSVTQLILPIRTY persistent 376 dnaN DNA polymerase III subunit beta 2.7.7.7 GO:0003677,GO:0003887,GO:0005737,GO:0006260,GO:0006271,GO:0008408,GO:0009360 COG0592,L UniRef50_Q9RCA1,UniRef90_Q5HK00 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 15358 15591 . + . GCA_005502385.1_00452_gene GCA_005502385.1_00452 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MVQEVIVEGEITLGQFLKTEGIIESGGQAKWFLQDYDVLLNGERETRRGKKLADQDRIDFPDIPDIDSFIIIHQGEQ . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 15358 15591 . + . GCA_005502385.1_00452_mRNA GCA_005502385.1_00452 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MVQEVIVEGEITLGQFLKTEGIIESGGQAKWFLQDYDVLLNGERETRRGKKLADQDRIDFPDIPDIDSFIIIHQGEQ . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 15358 15591 . + 0 GCA_005502385.1_00452 GCA_005502385.1_00452_gene,GCA_005502385.1_00452_mRNA GCA_005502385.1_00452 hypothetical protein GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MVQEVIVEGEITLGQFLKTEGIIESGGQAKWFLQDYDVLLNGERETRRGKKLADQDRIDFPDIPDIDSFIIIHQGEQ persistent 77 ybcJ S4 domain-containing protein YaaA COG2501,J UPI00024E191C UniRef100_A0AAE5MXS5,UniRef50_A0A028ZHC3,UniRef90_A0A533J017 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 15588 16703 . + . GCA_005502385.1_00453_gene GCA_005502385.1_00453 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MKLKTLQLENYRNYEAVTLNCHPEVNILIGENAQGKTNLLESIYVLALAKSHRTSNDKELIRFNSEYAKIEGELSYRHGTMPLTMYITKKGKQVKVNHLEQSRLTQYVGHLNVVLFAPEDLNIVKGSPQIRRRFIDMELGQISAVYLNDLAQYQRILKQKNNYLKQLQLGQKTDKTMLEVLNQQFAQYALNVTLRREQFIEELEALAQPIHAGITNQRETLSLKYLPSIKLSDTSKNKSELLDEVITLLNEYQQREMDRAVCLYGPHRDDLGFNVNDMDAQTYGSQGQQRTTALSIKLAEIELMNIEVGEYPILLLDDVLSELDDSRQTHLLSTIQHKVQTFVTTTSVDGIDHEIMNNAKLYRINQGEIIK . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 15588 16703 . + . GCA_005502385.1_00453_mRNA GCA_005502385.1_00453 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MKLKTLQLENYRNYEAVTLNCHPEVNILIGENAQGKTNLLESIYVLALAKSHRTSNDKELIRFNSEYAKIEGELSYRHGTMPLTMYITKKGKQVKVNHLEQSRLTQYVGHLNVVLFAPEDLNIVKGSPQIRRRFIDMELGQISAVYLNDLAQYQRILKQKNNYLKQLQLGQKTDKTMLEVLNQQFAQYALNVTLRREQFIEELEALAQPIHAGITNQRETLSLKYLPSIKLSDTSKNKSELLDEVITLLNEYQQREMDRAVCLYGPHRDDLGFNVNDMDAQTYGSQGQQRTTALSIKLAEIELMNIEVGEYPILLLDDVLSELDDSRQTHLLSTIQHKVQTFVTTTSVDGIDHEIMNNAKLYRINQGEIIK . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 15588 16703 . + 0 GCA_005502385.1_00453 GCA_005502385.1_00453_gene,GCA_005502385.1_00453_mRNA GCA_005502385.1_00453 DNA replication and repair protein RecF GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MKLKTLQLENYRNYEAVTLNCHPEVNILIGENAQGKTNLLESIYVLALAKSHRTSNDKELIRFNSEYAKIEGELSYRHGTMPLTMYITKKGKQVKVNHLEQSRLTQYVGHLNVVLFAPEDLNIVKGSPQIRRRFIDMELGQISAVYLNDLAQYQRILKQKNNYLKQLQLGQKTDKTMLEVLNQQFAQYALNVTLRREQFIEELEALAQPIHAGITNQRETLSLKYLPSIKLSDTSKNKSELLDEVITLLNEYQQREMDRAVCLYGPHRDDLGFNVNDMDAQTYGSQGQQRTTALSIKLAEIELMNIEVGEYPILLLDDVLSELDDSRQTHLLSTIQHKVQTFVTTTSVDGIDHEIMNNAKLYRINQGEIIK persistent 371 recF DNA replication/repair protein RecF GO:0000731,GO:0003697,GO:0005524,GO:0005737,GO:0006260,GO:0006281,GO:0006302,GO:0006310,GO:0009432 COG1195,L WP_017175622.1 UPI0003193A2A UniRef100_A0A8X8KFS7,UniRef50_Q9CE70,UniRef90_Q4LAL2 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 16713 18647 . + . GCA_005502385.1_00454_gene GCA_005502385.1_00454 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MVNTLSDVNNTDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLKEIGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNKGISITLRDEREDEEQREDTYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNSGYATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKEGRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGEFDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGDVVENRRQFIEDNAVYANLDF . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 16713 18647 . + . GCA_005502385.1_00454_mRNA GCA_005502385.1_00454 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MVNTLSDVNNTDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLKEIGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNKGISITLRDEREDEEQREDTYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNSGYATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKEGRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGEFDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGDVVENRRQFIEDNAVYANLDF . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 16713 18647 . + 0 GCA_005502385.1_00454 GCA_005502385.1_00454_gene,GCA_005502385.1_00454_mRNA GCA_005502385.1_00454 DNA gyrase subunit B GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MVNTLSDVNNTDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLKEIGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNKGISITLRDEREDEEQREDTYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNSGYATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKEGRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGEFDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGDVVENRRQFIEDNAVYANLDF persistent 644 gyrB DNA topoisomerase (ATP-hydrolyzing) subunit B 5.6.2.2 GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0005737,GO:0006261,GO:0006265,GO:0034335,GO:0046872 COG0187,L WP_019834694.1 UPI000365404A UniRef100_UPI000365404A,UniRef50_Q6GKU0,UniRef90_Q6GKU0 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 18689 21343 . + . GCA_005502385.1_00455_gene GCA_005502385.1_00455 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MADSLPQSRINERNITNEMRESFLDYAMSVIVSRALPDVRDGLKPVHRRILYGLNEQGMTPDKPYKKSARIVGDVMGKYHPHGDSSIYDAMVRMAQTFSYRYPLVDGQGNFGSMDGDGAAAMRYTEAKMTKITLELLRDINKDTIDFLDNYDGTEREPEVLPSRFPNLLVNGASGIAVGMATNIPPHNLTEVIDGVLRLSQNPDITISELMEDIQGPDFPTSGLILGKSGIRRAYETGRGSIQMRARASIEERGGGRQRIVVTEIPYQVNKARMIEKIAELAREKRIEGITDLRDETSLRTGVRVVIDVRKDANANVILNNLYKHTPLQTSFGVNMIALVNGRPKLINLKEALVEYLEHQKTVVRRRTEYNLKKAKDRAHILEGLRIALDHIDEIISIIRESDTDKVAMETLQERFKLSERQAQAILDMRLRRLTGLERDKIENEYNELLSYIAELEEILANEDVLLQLVRDELTEIKERFGDERRTEIQLGGLDHLEDEDLIPEEQIVITLSHNNYIKRLPVSTYRSQNRGGRGVQGMNTLEEDFVSQLVTLSTHDNVLFFTNKGRVYKLKGYEVPELSRQSKGIPVINAIELENDEVISTMIAVRDLEDENSFLVFATKKGIVKRSALSNFSHINKNGKIAIGFKEDDELIAVRLTDGKQDILLGTAHASLIRFPENSLRPLGRTASGVRGISLRENDVVVGLDVAYAESEDEVLVVTEKGYGKRTPVSEYRLSNRGGKGIKTAKITERNGNVVCITTVSGQEDLMIVTDGGIIIRLQVEDISQNGRATQGVRLMKLGDNQAVSTVAKVIDKTEDEAATEAAQQTENASAQTTESANEQVIDDTTPGNALHTESDEDDERIEVRQDFMDRVNEDIENDSDQN . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 18689 21343 . + . GCA_005502385.1_00455_mRNA GCA_005502385.1_00455 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MADSLPQSRINERNITNEMRESFLDYAMSVIVSRALPDVRDGLKPVHRRILYGLNEQGMTPDKPYKKSARIVGDVMGKYHPHGDSSIYDAMVRMAQTFSYRYPLVDGQGNFGSMDGDGAAAMRYTEAKMTKITLELLRDINKDTIDFLDNYDGTEREPEVLPSRFPNLLVNGASGIAVGMATNIPPHNLTEVIDGVLRLSQNPDITISELMEDIQGPDFPTSGLILGKSGIRRAYETGRGSIQMRARASIEERGGGRQRIVVTEIPYQVNKARMIEKIAELAREKRIEGITDLRDETSLRTGVRVVIDVRKDANANVILNNLYKHTPLQTSFGVNMIALVNGRPKLINLKEALVEYLEHQKTVVRRRTEYNLKKAKDRAHILEGLRIALDHIDEIISIIRESDTDKVAMETLQERFKLSERQAQAILDMRLRRLTGLERDKIENEYNELLSYIAELEEILANEDVLLQLVRDELTEIKERFGDERRTEIQLGGLDHLEDEDLIPEEQIVITLSHNNYIKRLPVSTYRSQNRGGRGVQGMNTLEEDFVSQLVTLSTHDNVLFFTNKGRVYKLKGYEVPELSRQSKGIPVINAIELENDEVISTMIAVRDLEDENSFLVFATKKGIVKRSALSNFSHINKNGKIAIGFKEDDELIAVRLTDGKQDILLGTAHASLIRFPENSLRPLGRTASGVRGISLRENDVVVGLDVAYAESEDEVLVVTEKGYGKRTPVSEYRLSNRGGKGIKTAKITERNGNVVCITTVSGQEDLMIVTDGGIIIRLQVEDISQNGRATQGVRLMKLGDNQAVSTVAKVIDKTEDEAATEAAQQTENASAQTTESANEQVIDDTTPGNALHTESDEDDERIEVRQDFMDRVNEDIENDSDQN . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 18689 21343 . + 0 GCA_005502385.1_00455 GCA_005502385.1_00455_gene,GCA_005502385.1_00455_mRNA GCA_005502385.1_00455 DNA gyrase subunit A GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MADSLPQSRINERNITNEMRESFLDYAMSVIVSRALPDVRDGLKPVHRRILYGLNEQGMTPDKPYKKSARIVGDVMGKYHPHGDSSIYDAMVRMAQTFSYRYPLVDGQGNFGSMDGDGAAAMRYTEAKMTKITLELLRDINKDTIDFLDNYDGTEREPEVLPSRFPNLLVNGASGIAVGMATNIPPHNLTEVIDGVLRLSQNPDITISELMEDIQGPDFPTSGLILGKSGIRRAYETGRGSIQMRARASIEERGGGRQRIVVTEIPYQVNKARMIEKIAELAREKRIEGITDLRDETSLRTGVRVVIDVRKDANANVILNNLYKHTPLQTSFGVNMIALVNGRPKLINLKEALVEYLEHQKTVVRRRTEYNLKKAKDRAHILEGLRIALDHIDEIISIIRESDTDKVAMETLQERFKLSERQAQAILDMRLRRLTGLERDKIENEYNELLSYIAELEEILANEDVLLQLVRDELTEIKERFGDERRTEIQLGGLDHLEDEDLIPEEQIVITLSHNNYIKRLPVSTYRSQNRGGRGVQGMNTLEEDFVSQLVTLSTHDNVLFFTNKGRVYKLKGYEVPELSRQSKGIPVINAIELENDEVISTMIAVRDLEDENSFLVFATKKGIVKRSALSNFSHINKNGKIAIGFKEDDELIAVRLTDGKQDILLGTAHASLIRFPENSLRPLGRTASGVRGISLRENDVVVGLDVAYAESEDEVLVVTEKGYGKRTPVSEYRLSNRGGKGIKTAKITERNGNVVCITTVSGQEDLMIVTDGGIIIRLQVEDISQNGRATQGVRLMKLGDNQAVSTVAKVIDKTEDEAATEAAQQTENASAQTTESANEQVIDDTTPGNALHTESDEDDERIEVRQDFMDRVNEDIENDSDQN persistent 884 gyrA DNA gyrase subunit A 5.6.2.2 GO:0003677,GO:0003916,GO:0003918,GO:0005524,GO:0006259,GO:0006265 COG0188,L WP_019834693.1 UPI00037CE3E3 UniRef100_UPI00037CE3E3,UniRef50_Q2FKQ0,UniRef90_A0A380FVE8 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 21391 22203 . - . GCA_005502385.1_00456_gene GCA_005502385.1_00456 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 METLTNVTIPKRNDETHKGDYGKILLIGGSANLGGAIMLAARACLFSGSGLITVATHPTNHAAIHSRCPEAMVIDINDTKMLTKMIENTDSILIGPGLGVDFKGNNAITFLLQNIQPHQNLIVDGDAITIFCKLKPDIPTCRVIFTPHQKEWERLSGIPIEEQTYERNREAVDKLGATVVLKKHGTEIFFKDKEYKLPIGTPAMATGGMGDTLAGMITSFVGQFDSLQDAVTSATYIHSYIGEKLSEKMYVVPPSKLINQIPYVMKELER . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 21391 22203 . - . GCA_005502385.1_00456_mRNA GCA_005502385.1_00456 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 METLTNVTIPKRNDETHKGDYGKILLIGGSANLGGAIMLAARACLFSGSGLITVATHPTNHAAIHSRCPEAMVIDINDTKMLTKMIENTDSILIGPGLGVDFKGNNAITFLLQNIQPHQNLIVDGDAITIFCKLKPDIPTCRVIFTPHQKEWERLSGIPIEEQTYERNREAVDKLGATVVLKKHGTEIFFKDKEYKLPIGTPAMATGGMGDTLAGMITSFVGQFDSLQDAVTSATYIHSYIGEKLSEKMYVVPPSKLINQIPYVMKELER . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 21391 22203 . - 0 GCA_005502385.1_00456 GCA_005502385.1_00456_gene,GCA_005502385.1_00456_mRNA GCA_005502385.1_00456 ADP-dependent (S)-NAD(P)H-hydrate dehydratase GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 METLTNVTIPKRNDETHKGDYGKILLIGGSANLGGAIMLAARACLFSGSGLITVATHPTNHAAIHSRCPEAMVIDINDTKMLTKMIENTDSILIGPGLGVDFKGNNAITFLLQNIQPHQNLIVDGDAITIFCKLKPDIPTCRVIFTPHQKEWERLSGIPIEEQTYERNREAVDKLGATVVLKKHGTEIFFKDKEYKLPIGTPAMATGGMGDTLAGMITSFVGQFDSLQDAVTSATYIHSYIGEKLSEKMYVVPPSKLINQIPYVMKELER persistent 270 nnr2 ADP-dependent (S)-NAD(P)H-hydrate dehydratase COG0063,F WP_002488487.1 UPI00024E19FC UniRef100_A0A4Q9WPH6,UniRef50_Q2G2P8,UniRef90_A0A2K4DN40 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 22474 22677 . + . GCA_005502385.1_00457_gene GCA_005502385.1_00457 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 22474 22677 . + . GCA_005502385.1_00457_mRNA GCA_005502385.1_00457 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 . . . . . . . GCA_005502385.1|SCOV01000017.1 Infernal:001001 misc_RNA 22474 22677 96.6 + . GCA_005502385.1_00457 GCA_005502385.1_00457_gene,GCA_005502385.1_00457_mRNA GCA_005502385.1_00457 T-box GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 22753 24036 . + . GCA_005502385.1_00458_gene GCA_005502385.1_00458 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MLDIKQFRDETDKVKSKIELRGDDSKVVDEVLELDNQRRDLIGKTEEMKARRNKVSDQIAEKKRNKEDADDVIKEMRELGDEIKENDAKLNEVDNKIRDILIRIPNLIADDVPQGADDTENVELKKWGTPREFDFEPKAHWDLVEELKMADFERAAKVSGARFVYLTKDGALLERALMNYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTNFYRNEIIQPGVLPEKFTGQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEKPEDSWDALEDMTQNAEAILEELKLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTDFQARRANIRFKRDASSKPELVHTLNGSGLAVGRTFAAIVENYQNEDGSITIPEALVPFMGGKTEIRPVN . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 22753 24036 . + . GCA_005502385.1_00458_mRNA GCA_005502385.1_00458 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MLDIKQFRDETDKVKSKIELRGDDSKVVDEVLELDNQRRDLIGKTEEMKARRNKVSDQIAEKKRNKEDADDVIKEMRELGDEIKENDAKLNEVDNKIRDILIRIPNLIADDVPQGADDTENVELKKWGTPREFDFEPKAHWDLVEELKMADFERAAKVSGARFVYLTKDGALLERALMNYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTNFYRNEIIQPGVLPEKFTGQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEKPEDSWDALEDMTQNAEAILEELKLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTDFQARRANIRFKRDASSKPELVHTLNGSGLAVGRTFAAIVENYQNEDGSITIPEALVPFMGGKTEIRPVN . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 22753 24036 . + 0 GCA_005502385.1_00458 GCA_005502385.1_00458_gene,GCA_005502385.1_00458_mRNA GCA_005502385.1_00458 Serine--tRNA ligase GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MLDIKQFRDETDKVKSKIELRGDDSKVVDEVLELDNQRRDLIGKTEEMKARRNKVSDQIAEKKRNKEDADDVIKEMRELGDEIKENDAKLNEVDNKIRDILIRIPNLIADDVPQGADDTENVELKKWGTPREFDFEPKAHWDLVEELKMADFERAAKVSGARFVYLTKDGALLERALMNYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTNFYRNEIIQPGVLPEKFTGQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEKPEDSWDALEDMTQNAEAILEELKLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTDFQARRANIRFKRDASSKPELVHTLNGSGLAVGRTFAAIVENYQNEDGSITIPEALVPFMGGKTEIRPVN persistent 427 serS serine--tRNA ligase 6.1.1.11 GO:0000166,GO:0004828,GO:0005524,GO:0005737,GO:0006434,GO:0016260,GO:0016740 COG0172,J WP_002488451.1 UPI00024E19FB UniRef100_A0A4Q9WNA9,UniRef50_Q4A172,UniRef90_Q5HK07 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 24324 25019 . + . GCA_005502385.1_00459_gene GCA_005502385.1_00459 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MTSHVTFQQGVKECIPTLLGYIGIGLSFGIVAASQDFSVLEILLLCLLVYAGAVQFIICALVITGTPISAIVLTTLIVNSRFFLLSMTLSPNYKDYGIWNRLALSSLLTDETFGVAITPHLKGETINDRWLHGLNITAYSFWAIACVLGAVFGKYISHPEMLGLDFAITAMFIFLAMAQFETITRSKISIYIVLIAFVIVMMFILSWLMPSYVAILVTSICAATLGVVMDR . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 24324 25019 . + . GCA_005502385.1_00459_mRNA GCA_005502385.1_00459 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MTSHVTFQQGVKECIPTLLGYIGIGLSFGIVAASQDFSVLEILLLCLLVYAGAVQFIICALVITGTPISAIVLTTLIVNSRFFLLSMTLSPNYKDYGIWNRLALSSLLTDETFGVAITPHLKGETINDRWLHGLNITAYSFWAIACVLGAVFGKYISHPEMLGLDFAITAMFIFLAMAQFETITRSKISIYIVLIAFVIVMMFILSWLMPSYVAILVTSICAATLGVVMDR . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 24324 25019 . + 0 GCA_005502385.1_00459 GCA_005502385.1_00459_gene,GCA_005502385.1_00459_mRNA GCA_005502385.1_00459 hypothetical protein GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MTSHVTFQQGVKECIPTLLGYIGIGLSFGIVAASQDFSVLEILLLCLLVYAGAVQFIICALVITGTPISAIVLTTLIVNSRFFLLSMTLSPNYKDYGIWNRLALSSLLTDETFGVAITPHLKGETINDRWLHGLNITAYSFWAIACVLGAVFGKYISHPEMLGLDFAITAMFIFLAMAQFETITRSKISIYIVLIAFVIVMMFILSWLMPSYVAILVTSICAATLGVVMDR persistent 231 azlC Azaleucine resistance protein AzlC WP_070663193.1 UPI0008A59493 UniRef100_UPI0008A59493,UniRef50_Q2G2P6,UniRef90_A0AAE5JLL7 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 25016 25345 . + . GCA_005502385.1_00460_gene GCA_005502385.1_00460 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MTITGHMLLLIVLCGLVTLIVRVVPFLMISRIQLSETVIKWLSFIPISLFTALVIDSFIVQHKGMQGFELNIPFIVATIPTVIIAVVTRSLTITIIVGIIFIAGIRWFF . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 25016 25345 . + . GCA_005502385.1_00460_mRNA GCA_005502385.1_00460 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MTITGHMLLLIVLCGLVTLIVRVVPFLMISRIQLSETVIKWLSFIPISLFTALVIDSFIVQHKGMQGFELNIPFIVATIPTVIIAVVTRSLTITIIVGIIFIAGIRWFF . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 25016 25345 . + 0 GCA_005502385.1_00460 GCA_005502385.1_00460_gene,GCA_005502385.1_00460_mRNA GCA_005502385.1_00460 hypothetical protein GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MTITGHMLLLIVLCGLVTLIVRVVPFLMISRIQLSETVIKWLSFIPISLFTALVIDSFIVQHKGMQGFELNIPFIVATIPTVIIAVVTRSLTITIIVGIIFIAGIRWFF persistent 109 azlD AzlD domain-containing protein WP_017175618.1 UPI0002DDE505 UniRef100_A0A3S7GUG9,UniRef50_Q4A170,UniRef90_A0A974KZ74 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 25431 25531 . + . GCA_005502385.1_00461_gene GCA_005502385.1_00461 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 25431 25531 . + . GCA_005502385.1_00461_mRNA GCA_005502385.1_00461 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 . . . . . . . GCA_005502385.1|SCOV01000017.1 Infernal:001001 misc_RNA 25431 25531 71.7 + . GCA_005502385.1_00461 GCA_005502385.1_00461_gene,GCA_005502385.1_00461_mRNA GCA_005502385.1_00461 SAM GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 25603 26571 . + . GCA_005502385.1_00462_gene GCA_005502385.1_00462 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MTNYTVDTLHLGAFTTESGETIENLKLRYEHVGYSGQPLVVVCHALTGNHLTYGTDEHPGWWREIIDGGYMPIYDYQFLTFNVIGSPFGSSSPLNDAHFPKTITLRDIVKAIELGIKALGFTKIDILIGGSLGGMQVMELLYNHQFEVDKAVILAATDKTSSYSRAFNEIAREAIHIGGKEGLSIARQLGFLTYRSSKSYDARFTPDEVVNYQRYQGNKFKESYDLSCYLTMLNVLDSHHLDRQRDDVDEVFQSLNTKVLTMGFTDDLLYPDDQVRAVGERFKYHRHFFVPDNVGHDGFLLNFNDWAPNLYHFLKVSKFKRK . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 25603 26571 . + . GCA_005502385.1_00462_mRNA GCA_005502385.1_00462 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MTNYTVDTLHLGAFTTESGETIENLKLRYEHVGYSGQPLVVVCHALTGNHLTYGTDEHPGWWREIIDGGYMPIYDYQFLTFNVIGSPFGSSSPLNDAHFPKTITLRDIVKAIELGIKALGFTKIDILIGGSLGGMQVMELLYNHQFEVDKAVILAATDKTSSYSRAFNEIAREAIHIGGKEGLSIARQLGFLTYRSSKSYDARFTPDEVVNYQRYQGNKFKESYDLSCYLTMLNVLDSHHLDRQRDDVDEVFQSLNTKVLTMGFTDDLLYPDDQVRAVGERFKYHRHFFVPDNVGHDGFLLNFNDWAPNLYHFLKVSKFKRK . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 25603 26571 . + 0 GCA_005502385.1_00462 GCA_005502385.1_00462_gene,GCA_005502385.1_00462_mRNA GCA_005502385.1_00462 Homoserine O-acetyltransferase GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MTNYTVDTLHLGAFTTESGETIENLKLRYEHVGYSGQPLVVVCHALTGNHLTYGTDEHPGWWREIIDGGYMPIYDYQFLTFNVIGSPFGSSSPLNDAHFPKTITLRDIVKAIELGIKALGFTKIDILIGGSLGGMQVMELLYNHQFEVDKAVILAATDKTSSYSRAFNEIAREAIHIGGKEGLSIARQLGFLTYRSSKSYDARFTPDEVVNYQRYQGNKFKESYDLSCYLTMLNVLDSHHLDRQRDDVDEVFQSLNTKVLTMGFTDDLLYPDDQVRAVGERFKYHRHFFVPDNVGHDGFLLNFNDWAPNLYHFLKVSKFKRK persistent 322 mET2 Alpha/beta fold hydrolase COG2021,E WP_017175617.1 UPI00030D7B59 UniRef100_A0A4V2KWZ6,UniRef50_A0A0Z4IRW6,UniRef90_A0A5B2YYC0 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 26661 27572 . + . GCA_005502385.1_00463_gene GCA_005502385.1_00463 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MFSKVHPKAMIIGTIVLVAVALVTYVLPIIGLILCLFATIPGIIMWHKSIATFGIGALLTVVITTLLGNTFVLSAMILVLLLSFVIGQLLKERTSKERILYITTMYISIVTLIAFMLLQAFKKIPNTEILIKPAKDAMNNAIVNSGVESDYKIILEEGFRQMAVQLPSYIIIMVFLLVLINIIITFPILRKFKVATPIFRPLFAWQMNRTLLWIYMIVLVCVMFAMKPSIFQSIVLNFEVVLSLLMYIQGLSLIHFFGKAKRLPDAVSILLMVVGTVISPFTHIVSLLGVLDLGINLKRMIKK . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 26661 27572 . + . GCA_005502385.1_00463_mRNA GCA_005502385.1_00463 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MFSKVHPKAMIIGTIVLVAVALVTYVLPIIGLILCLFATIPGIIMWHKSIATFGIGALLTVVITTLLGNTFVLSAMILVLLLSFVIGQLLKERTSKERILYITTMYISIVTLIAFMLLQAFKKIPNTEILIKPAKDAMNNAIVNSGVESDYKIILEEGFRQMAVQLPSYIIIMVFLLVLINIIITFPILRKFKVATPIFRPLFAWQMNRTLLWIYMIVLVCVMFAMKPSIFQSIVLNFEVVLSLLMYIQGLSLIHFFGKAKRLPDAVSILLMVVGTVISPFTHIVSLLGVLDLGINLKRMIKK . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 26661 27572 . + 0 GCA_005502385.1_00463 GCA_005502385.1_00463_gene,GCA_005502385.1_00463_mRNA GCA_005502385.1_00463 hypothetical protein GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MFSKVHPKAMIIGTIVLVAVALVTYVLPIIGLILCLFATIPGIIMWHKSIATFGIGALLTVVITTLLGNTFVLSAMILVLLLSFVIGQLLKERTSKERILYITTMYISIVTLIAFMLLQAFKKIPNTEILIKPAKDAMNNAIVNSGVESDYKIILEEGFRQMAVQLPSYIIIMVFLLVLINIIITFPILRKFKVATPIFRPLFAWQMNRTLLWIYMIVLVCVMFAMKPSIFQSIVLNFEVVLSLLMYIQGLSLIHFFGKAKRLPDAVSILLMVVGTVISPFTHIVSLLGVLDLGINLKRMIKK persistent 303 DUF2232 domain-containing protein UniRef50_Q2G2T2,UniRef90_A0AAE5JLC9 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 27600 29567 . + . GCA_005502385.1_00464_gene GCA_005502385.1_00464 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MNRQSTKKALLIPYILMVLTAIAIVIVGFIFKPLIATFTAIALIIMIVISAVLIKQALSKMDHYVDNLSGHISAGSNKAIKRMPIGLVVIDADDHIEWINQYMSEHLETNVISEPVNEVFPNILKQLERIQEIEIEHGQYHYHVRYSEEERCLYFFDITEEVHTNELYEESKPIIATLFLDNYDEITQNMNDTQRSEINSMVTRIISRWATEYNIYFKRYSSDQFVAYLNQKILAEIEDSNFDILSQLREKSVGYRAQLTLSIGVGEGTEDLIELGELSQSGLDLALGRGGDQVAIKNMNGNVRFYGGKTDPMEKRTRVRARVISHALKDILTEGDKVIIMGHKRPDLDAVGAAIGVSRFASMNNLEAYVVLNEEDIDPTLSRVMEEIDKKPELKERFVTSDEAWDMMTSKTTVVVVDTHKPEMVLDENILNKANRKVVIDHHRRGESFISNPLLVYMEPYASSTAELVTELLEYQPTEQRLSRLESTIMYAGIIVDTRNFTLRTGSRTFDAASYLRAHGADTILTQQFLKDDVDTYINRSELIRTVEVQDHGVAIAHGSNDKIYHPVTVAQAADELLSLEGIEASYVVAKREDNLIGISARSLGGINVQLTMEALGGGGHLTNAATQIKGVTIEEAIEQLQQAITEQMSRSEDT . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 27600 29567 . + . GCA_005502385.1_00464_mRNA GCA_005502385.1_00464 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MNRQSTKKALLIPYILMVLTAIAIVIVGFIFKPLIATFTAIALIIMIVISAVLIKQALSKMDHYVDNLSGHISAGSNKAIKRMPIGLVVIDADDHIEWINQYMSEHLETNVISEPVNEVFPNILKQLERIQEIEIEHGQYHYHVRYSEEERCLYFFDITEEVHTNELYEESKPIIATLFLDNYDEITQNMNDTQRSEINSMVTRIISRWATEYNIYFKRYSSDQFVAYLNQKILAEIEDSNFDILSQLREKSVGYRAQLTLSIGVGEGTEDLIELGELSQSGLDLALGRGGDQVAIKNMNGNVRFYGGKTDPMEKRTRVRARVISHALKDILTEGDKVIIMGHKRPDLDAVGAAIGVSRFASMNNLEAYVVLNEEDIDPTLSRVMEEIDKKPELKERFVTSDEAWDMMTSKTTVVVVDTHKPEMVLDENILNKANRKVVIDHHRRGESFISNPLLVYMEPYASSTAELVTELLEYQPTEQRLSRLESTIMYAGIIVDTRNFTLRTGSRTFDAASYLRAHGADTILTQQFLKDDVDTYINRSELIRTVEVQDHGVAIAHGSNDKIYHPVTVAQAADELLSLEGIEASYVVAKREDNLIGISARSLGGINVQLTMEALGGGGHLTNAATQIKGVTIEEAIEQLQQAITEQMSRSEDT . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 27600 29567 . + 0 GCA_005502385.1_00464 GCA_005502385.1_00464_gene,GCA_005502385.1_00464_mRNA GCA_005502385.1_00464 Cyclic-di-AMP phosphodiesterase GdpP GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MNRQSTKKALLIPYILMVLTAIAIVIVGFIFKPLIATFTAIALIIMIVISAVLIKQALSKMDHYVDNLSGHISAGSNKAIKRMPIGLVVIDADDHIEWINQYMSEHLETNVISEPVNEVFPNILKQLERIQEIEIEHGQYHYHVRYSEEERCLYFFDITEEVHTNELYEESKPIIATLFLDNYDEITQNMNDTQRSEINSMVTRIISRWATEYNIYFKRYSSDQFVAYLNQKILAEIEDSNFDILSQLREKSVGYRAQLTLSIGVGEGTEDLIELGELSQSGLDLALGRGGDQVAIKNMNGNVRFYGGKTDPMEKRTRVRARVISHALKDILTEGDKVIIMGHKRPDLDAVGAAIGVSRFASMNNLEAYVVLNEEDIDPTLSRVMEEIDKKPELKERFVTSDEAWDMMTSKTTVVVVDTHKPEMVLDENILNKANRKVVIDHHRRGESFISNPLLVYMEPYASSTAELVTELLEYQPTEQRLSRLESTIMYAGIIVDTRNFTLRTGSRTFDAASYLRAHGADTILTQQFLKDDVDTYINRSELIRTVEVQDHGVAIAHGSNDKIYHPVTVAQAADELLSLEGIEASYVVAKREDNLIGISARSLGGINVQLTMEALGGGGHLTNAATQIKGVTIEEAIEQLQQAITEQMSRSEDT persistent 655 Cyclic-di-AMP phosphodiesterase 3.1.4.59 WP_017175615.1 UPI000302E5D1 UniRef100_A0A8X8GP12,UniRef50_A0A389PUT3,UniRef90_A0A4Z1AZW3 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 29564 30010 . + . GCA_005502385.1_00465_gene GCA_005502385.1_00465 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MKVIFTQDVKGKGKKGEVKDVPVGYANNFLLKNKYAVEATPGNLKQLEQQNRRAEADRQQEIDDAKALKAKLEDIEVEVSAKTGEGGKLFGSISTKQIADALKNQHDIKIDKRKMDLPHGIHALGYTNVPVKLDKKVEGTIRVHTVEK . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 29564 30010 . + . GCA_005502385.1_00465_mRNA GCA_005502385.1_00465 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MKVIFTQDVKGKGKKGEVKDVPVGYANNFLLKNKYAVEATPGNLKQLEQQNRRAEADRQQEIDDAKALKAKLEDIEVEVSAKTGEGGKLFGSISTKQIADALKNQHDIKIDKRKMDLPHGIHALGYTNVPVKLDKKVEGTIRVHTVEK . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 29564 30010 . + 0 GCA_005502385.1_00465 GCA_005502385.1_00465_gene,GCA_005502385.1_00465_mRNA GCA_005502385.1_00465 50S ribosomal protein L9 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MKVIFTQDVKGKGKKGEVKDVPVGYANNFLLKNKYAVEATPGNLKQLEQQNRRAEADRQQEIDDAKALKAKLEDIEVEVSAKTGEGGKLFGSISTKQIADALKNQHDIKIDKRKMDLPHGIHALGYTNVPVKLDKKVEGTIRVHTVEK persistent 148 rplI 50S ribosomal protein L9 GO:0003735,GO:0005840,GO:0006412 UniRef50_B9DPY3,UniRef90_UPI001F5A80F2 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 30121 31521 . + . GCA_005502385.1_00466_gene GCA_005502385.1_00466 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MDNMYDQRQMPHNNEAEQSVLGAIILDPELIGSTQEVLLPESFYRGAHQHIFRAMMNLNEDAHEIDVVTLMEQLTKEGTLSEAGGPQYLAELSNNVPTTRNIEYYRNIVANLALKRRLIQTADSIANDGYNNELELDAILSDAEKRILELSANRQSDGFKDIRDVLGQVYETAEELDQNSGQTPGIPTGYRDLDQMTAGFNRNDLIILAARPSVGKTAFALNIAQKVATHEDNYTVGIFSLEMGADQLATRMICSSGNVDSNRLRTGTMTEEDWNRFTIAVGKLSRTKIFIDDTPGIRITDLRSKCRRLKQEHGLDMIVIDYLQLIQGSGSRFSDNRQQEVSEISRTLKAIARELECPVIALSQLSRGVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNRGDGEEDDDSTHFEPQSNDDNGEIEIIIAKQRNGPTGTVKLHFMKQYNKFTDIDYAHADMS . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 30121 31521 . + . GCA_005502385.1_00466_mRNA GCA_005502385.1_00466 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MDNMYDQRQMPHNNEAEQSVLGAIILDPELIGSTQEVLLPESFYRGAHQHIFRAMMNLNEDAHEIDVVTLMEQLTKEGTLSEAGGPQYLAELSNNVPTTRNIEYYRNIVANLALKRRLIQTADSIANDGYNNELELDAILSDAEKRILELSANRQSDGFKDIRDVLGQVYETAEELDQNSGQTPGIPTGYRDLDQMTAGFNRNDLIILAARPSVGKTAFALNIAQKVATHEDNYTVGIFSLEMGADQLATRMICSSGNVDSNRLRTGTMTEEDWNRFTIAVGKLSRTKIFIDDTPGIRITDLRSKCRRLKQEHGLDMIVIDYLQLIQGSGSRFSDNRQQEVSEISRTLKAIARELECPVIALSQLSRGVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNRGDGEEDDDSTHFEPQSNDDNGEIEIIIAKQRNGPTGTVKLHFMKQYNKFTDIDYAHADMS . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 30121 31521 . + 0 GCA_005502385.1_00466 GCA_005502385.1_00466_gene,GCA_005502385.1_00466_mRNA GCA_005502385.1_00466 Replicative DNA helicase GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MDNMYDQRQMPHNNEAEQSVLGAIILDPELIGSTQEVLLPESFYRGAHQHIFRAMMNLNEDAHEIDVVTLMEQLTKEGTLSEAGGPQYLAELSNNVPTTRNIEYYRNIVANLALKRRLIQTADSIANDGYNNELELDAILSDAEKRILELSANRQSDGFKDIRDVLGQVYETAEELDQNSGQTPGIPTGYRDLDQMTAGFNRNDLIILAARPSVGKTAFALNIAQKVATHEDNYTVGIFSLEMGADQLATRMICSSGNVDSNRLRTGTMTEEDWNRFTIAVGKLSRTKIFIDDTPGIRITDLRSKCRRLKQEHGLDMIVIDYLQLIQGSGSRFSDNRQQEVSEISRTLKAIARELECPVIALSQLSRGVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNRGDGEEDDDSTHFEPQSNDDNGEIEIIIAKQRNGPTGTVKLHFMKQYNKFTDIDYAHADMS persistent 466 dnaB replicative DNA helicase 3.6.4.12,5.6.2.3 GO:0003677,GO:0003678,GO:0005524,GO:0006260 WP_049415197.1 UPI00066DD76C UniRef100_UPI00066DD76C,UniRef50_A0A5R9B465,UniRef90_A0A4Z1BV04 . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka gene 31801 33084 . + . GCA_005502385.1_00467_gene GCA_005502385.1_00467 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MSSIVVVGTQWGDEGKGKITDFLAEQADVIARFSGGNNAGHTIQFGGETYKLHLVPSGIFYKDKLAVIGNGVVVDPVALLKELDGLNERGISTDNLRISNRAQVILPYHLAQDEYEERRRGDNKIGTTKKGIGPAYVDKAQRIGIRMADLLEKDTFERRLKENIEIKNAYFKGMFNETCPHFDEMFDEYYAAGQRLKEFVTDTAKILDDAFVADEKVLFEGAQGVMLDIDHGTYPFVTSSNPVAGNVTVGTGVGPTFVSKVIGVCKSYTSRVGDGPFPTELFDEDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLSINSIDVLTGLDTVKICTAYELDGETITEYPANLDQLRRCKPIFEELPGWTEDITGCRTLEELPENARKYLERISELCGVHISIFSVGPDREQTNLLEKLW . . . . . . . GCA_005502385.1|SCOV01000017.1 prokka mRNA 31801 33084 . + . GCA_005502385.1_00467_mRNA GCA_005502385.1_00467 GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MSSIVVVGTQWGDEGKGKITDFLAEQADVIARFSGGNNAGHTIQFGGETYKLHLVPSGIFYKDKLAVIGNGVVVDPVALLKELDGLNERGISTDNLRISNRAQVILPYHLAQDEYEERRRGDNKIGTTKKGIGPAYVDKAQRIGIRMADLLEKDTFERRLKENIEIKNAYFKGMFNETCPHFDEMFDEYYAAGQRLKEFVTDTAKILDDAFVADEKVLFEGAQGVMLDIDHGTYPFVTSSNPVAGNVTVGTGVGPTFVSKVIGVCKSYTSRVGDGPFPTELFDEDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLSINSIDVLTGLDTVKICTAYELDGETITEYPANLDQLRRCKPIFEELPGWTEDITGCRTLEELPENARKYLERISELCGVHISIFSVGPDREQTNLLEKLW . . . . . . . GCA_005502385.1|SCOV01000017.1 Prodigal:002006 CDS 31801 33084 . + 0 GCA_005502385.1_00467 GCA_005502385.1_00467_gene,GCA_005502385.1_00467_mRNA GCA_005502385.1_00467 Adenylosuccinate synthetase GCA_005502385.1 SCOV01000017.1 GCA_005502385.1|SCOV01000017.1 GCA_005502385.1_SCOV01000017.1 MSSIVVVGTQWGDEGKGKITDFLAEQADVIARFSGGNNAGHTIQFGGETYKLHLVPSGIFYKDKLAVIGNGVVVDPVALLKELDGLNERGISTDNLRISNRAQVILPYHLAQDEYEERRRGDNKIGTTKKGIGPAYVDKAQRIGIRMADLLEKDTFERRLKENIEIKNAYFKGMFNETCPHFDEMFDEYYAAGQRLKEFVTDTAKILDDAFVADEKVLFEGAQGVMLDIDHGTYPFVTSSNPVAGNVTVGTGVGPTFVSKVIGVCKSYTSRVGDGPFPTELFDEDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLSINSIDVLTGLDTVKICTAYELDGETITEYPANLDQLRRCKPIFEELPGWTEDITGCRTLEELPENARKYLERISELCGVHISIFSVGPDREQTNLLEKLW persistent 427 purA adenylosuccinate synthase 6.3.4.4 GO:0000287,GO:0004019,GO:0005525,GO:0005737,GO:0006164,GO:0044208,GO:0046040 COG0104,F WP_017175614.1 UPI0002D4E51A UniRef100_A0A1L8Y6Y2,UniRef50_Q03ET4,UniRef90_Q5HK16 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 530 1126 . - . GCA_005502385.1_00468_gene GCA_005502385.1_00468 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MHYPEPISKLIDSFMKLPGIGPKTAQRLAFYTLDMKEDDVVKFAKALVDVKRELTYCSICGHITEKDPCYICEDKQRDRSIICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDINIPTLIDRLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEYADEVTLSKAIAGRTEM . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 530 1126 . - . GCA_005502385.1_00468_mRNA GCA_005502385.1_00468 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MHYPEPISKLIDSFMKLPGIGPKTAQRLAFYTLDMKEDDVVKFAKALVDVKRELTYCSICGHITEKDPCYICEDKQRDRSIICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDINIPTLIDRLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEYADEVTLSKAIAGRTEM . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 530 1126 . - 0 GCA_005502385.1_00468 GCA_005502385.1_00468_gene,GCA_005502385.1_00468_mRNA GCA_005502385.1_00468 Recombination protein RecR GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MHYPEPISKLIDSFMKLPGIGPKTAQRLAFYTLDMKEDDVVKFAKALVDVKRELTYCSICGHITEKDPCYICEDKQRDRSIICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDINIPTLIDRLKDEEVKELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEYADEVTLSKAIAGRTEM persistent 198 recR recombination mediator RecR GO:0003677,GO:0006281,GO:0006310,GO:0046872 COG0353,L WP_002447967.1 UPI00019FC270 UniRef100_A0A8X8GSV9,UniRef50_Q6GJJ3,UniRef90_Q6GJJ3 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 1134 1454 . - . GCA_005502385.1_00469_gene GCA_005502385.1_00469 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MMRGGGNMQQMMKQMQKMQKKMAQEQEKLKDERIVGTAGGGMVAVTVTGHKEVVDVEIKEEAVDPDDIEMLQDLVLAATNEAMNKADNLTQERLGKHTQGLNIPGM . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 1134 1454 . - . GCA_005502385.1_00469_mRNA GCA_005502385.1_00469 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MMRGGGNMQQMMKQMQKMQKKMAQEQEKLKDERIVGTAGGGMVAVTVTGHKEVVDVEIKEEAVDPDDIEMLQDLVLAATNEAMNKADNLTQERLGKHTQGLNIPGM . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 1134 1454 . - 0 GCA_005502385.1_00469 GCA_005502385.1_00469_gene,GCA_005502385.1_00469_mRNA GCA_005502385.1_00469 Nucleoid-associated protein GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MMRGGGNMQQMMKQMQKMQKKMAQEQEKLKDERIVGTAGGGMVAVTVTGHKEVVDVEIKEEAVDPDDIEMLQDLVLAATNEAMNKADNLTQERLGKHTQGLNIPGM persistent 106 Nucleoid-associated protein SAOUHSC_00444 UniRef50_Q2G0T4 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 1578 3287 . - . GCA_005502385.1_00470_gene GCA_005502385.1_00470 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MNYQALYRMFRPQSFNDVVGQEHVTKTLRNAISKGKQSHAYIFSGPRGTGKTSIAKVFAKAINCLNPHDGEPCNECAVCKGITQGTNGDVIEIDAASNNGVDEIRNIRDKVKYAPSESKYKVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTEPHKIPPTIISRAQRFDFKAISTEQIVERLRFVAQEQSLDYEEAALEFIAKASEGGMRDALSIMDQAIAFGDEHLTLQDVLDVTGSVDEASLNELFNDIVNGNVKEAFSRYHHFVSEGKEVNRLINDMIYFVRDTIMNKTINEQTSYDALTQFDLETLYHMIDIINDTLVSIRFSVNQNVHFEVLLVKLAEMVKTNPTKVENVATTPVATEPNNEVLLQRMEQLENELKTLKAQGISQSNKKHTQTNTHSRNKRQSKAAFSMTQIAKVLDEANKEDIQLLKEHWQEVIDYAKSNDKKSLVSLLQNSIPVAASRKRVLIQFDEEIHCEIVNKDEEKRKNIESVVCNIIDKNVEVVGVPSDQWMRVRSEYINHRKQNDHHSSESTKDNTKEETSDIAQKARDLFGEDTVNIIDE . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 1578 3287 . - . GCA_005502385.1_00470_mRNA GCA_005502385.1_00470 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MNYQALYRMFRPQSFNDVVGQEHVTKTLRNAISKGKQSHAYIFSGPRGTGKTSIAKVFAKAINCLNPHDGEPCNECAVCKGITQGTNGDVIEIDAASNNGVDEIRNIRDKVKYAPSESKYKVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTEPHKIPPTIISRAQRFDFKAISTEQIVERLRFVAQEQSLDYEEAALEFIAKASEGGMRDALSIMDQAIAFGDEHLTLQDVLDVTGSVDEASLNELFNDIVNGNVKEAFSRYHHFVSEGKEVNRLINDMIYFVRDTIMNKTINEQTSYDALTQFDLETLYHMIDIINDTLVSIRFSVNQNVHFEVLLVKLAEMVKTNPTKVENVATTPVATEPNNEVLLQRMEQLENELKTLKAQGISQSNKKHTQTNTHSRNKRQSKAAFSMTQIAKVLDEANKEDIQLLKEHWQEVIDYAKSNDKKSLVSLLQNSIPVAASRKRVLIQFDEEIHCEIVNKDEEKRKNIESVVCNIIDKNVEVVGVPSDQWMRVRSEYINHRKQNDHHSSESTKDNTKEETSDIAQKARDLFGEDTVNIIDE . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 1578 3287 . - 0 GCA_005502385.1_00470 GCA_005502385.1_00470_gene,GCA_005502385.1_00470_mRNA GCA_005502385.1_00470 Holliday junction ATP-dependent DNA helicase RuvB GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MNYQALYRMFRPQSFNDVVGQEHVTKTLRNAISKGKQSHAYIFSGPRGTGKTSIAKVFAKAINCLNPHDGEPCNECAVCKGITQGTNGDVIEIDAASNNGVDEIRNIRDKVKYAPSESKYKVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTEPHKIPPTIISRAQRFDFKAISTEQIVERLRFVAQEQSLDYEEAALEFIAKASEGGMRDALSIMDQAIAFGDEHLTLQDVLDVTGSVDEASLNELFNDIVNGNVKEAFSRYHHFVSEGKEVNRLINDMIYFVRDTIMNKTINEQTSYDALTQFDLETLYHMIDIINDTLVSIRFSVNQNVHFEVLLVKLAEMVKTNPTKVENVATTPVATEPNNEVLLQRMEQLENELKTLKAQGISQSNKKHTQTNTHSRNKRQSKAAFSMTQIAKVLDEANKEDIQLLKEHWQEVIDYAKSNDKKSLVSLLQNSIPVAASRKRVLIQFDEEIHCEIVNKDEEKRKNIESVVCNIIDKNVEVVGVPSDQWMRVRSEYINHRKQNDHHSSESTKDNTKEETSDIAQKARDLFGEDTVNIIDE persistent 569 dnaX DNA polymerase III subunit gamma/tau 2.7.7.7 GO:0003677,GO:0003887,GO:0005524,GO:0006260,GO:0009360 WP_070436579.1 UPI0008A6609C UniRef100_UPI0008A6609C,UniRef50_A0A9X6AJV3,UniRef90_A0A3S7GUG0 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 3360 3878 . - . GCA_005502385.1_00471_gene GCA_005502385.1_00471 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MQVYLSTLTEMDYIETLEKLEKHYTNNKGLDGKSHSKIISNLRKQPTYNYELEVIAKKEDGDIIGHIMLNEVNLIDNEDTFKVLQLSSLIVATSYRNQGIGKALVQAVEERAKAHHYTAIIVDDCPEYFTALGYVSAAQHHIISKNDDKSLYVKFLWDQLSEYPHGKLQPIS . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 3360 3878 . - . GCA_005502385.1_00471_mRNA GCA_005502385.1_00471 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MQVYLSTLTEMDYIETLEKLEKHYTNNKGLDGKSHSKIISNLRKQPTYNYELEVIAKKEDGDIIGHIMLNEVNLIDNEDTFKVLQLSSLIVATSYRNQGIGKALVQAVEERAKAHHYTAIIVDDCPEYFTALGYVSAAQHHIISKNDDKSLYVKFLWDQLSEYPHGKLQPIS . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 3360 3878 . - 0 GCA_005502385.1_00471 GCA_005502385.1_00471_gene,GCA_005502385.1_00471_mRNA GCA_005502385.1_00471 hypothetical protein GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MQVYLSTLTEMDYIETLEKLEKHYTNNKGLDGKSHSKIISNLRKQPTYNYELEVIAKKEDGDIIGHIMLNEVNLIDNEDTFKVLQLSSLIVATSYRNQGIGKALVQAVEERAKAHHYTAIIVDDCPEYFTALGYVSAAQHHIISKNDDKSLYVKFLWDQLSEYPHGKLQPIS persistent 172 Acetyltransferase WP_017175206.1 UPI000313CE6C UniRef100_A0A3S7GUS8,UniRef50_Q2G0T6,UniRef90_A0A3S7GUS8 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 4195 4464 . - . GCA_005502385.1_00472_gene GCA_005502385.1_00472 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 4195 4464 . - . GCA_005502385.1_00472_mRNA GCA_005502385.1_00472 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 . . . . . . . GCA_005502385.1|SCOV01000018.1 Infernal:001001 misc_RNA 4195 4464 204.0 - . GCA_005502385.1_00472 GCA_005502385.1_00472_gene,GCA_005502385.1_00472_mRNA GCA_005502385.1_00472 Bacteria_large_SRP GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 4699 4791 . - . GCA_005502385.1_00473_gene GCA_005502385.1_00473 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 4699 4791 . - . GCA_005502385.1_00473_mRNA GCA_005502385.1_00473 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 . . . . . . . GCA_005502385.1|SCOV01000018.1 Aragorn:001002 tRNA 4699 4791 . - . GCA_005502385.1_00473 GCA_005502385.1_00473_gene,GCA_005502385.1_00473_mRNA GCA_005502385.1_00473 tRNA-Ser(tga) GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 4850 6313 . - . GCA_005502385.1_00474_gene GCA_005502385.1_00474 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MGEFKGFMKYEKQSLAELSLIERLEGHEAFQQRFSREEASIQGARCMDCGTPFCQTGLPFGRETIGCPIGNYIPEWNDLVYHQDFKEAYERLSETNNFPEFTGRICPAPCEQSCVMKINRDSVAIKGIERTIIDEAYDNGWVKPKYPKEHKNQSVAIVGSGPAGLAAAEELNHLGYQVTVFERAAEPGGLLMYGIPNMKLDKTVVRRRIEIMREAGITFKTNTNIGVDITRDELEEQFDAIILCTGAQKARDLPLEGRMGQGIHFAMDYLTEQMQVLNGEIEEASITAKDKNVIVIGAGDTGADCVATALRENCKSIVQFNKYTKAPEEITFESNTSWPLALPVFKMDYAHKEYEARFGREPRAYGVQTMRYDVDAIGNIRGVYTQILEETPEGMVVVDGTERHWPADLVLLSIGFEGTETTVPRSFDIKTKQNKIVANEQDYRTNQEKVFAAGDARRGQSLVVWAIKEGRAVAKSVDQYLKQKVLA . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 4850 6313 . - . GCA_005502385.1_00474_mRNA GCA_005502385.1_00474 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MGEFKGFMKYEKQSLAELSLIERLEGHEAFQQRFSREEASIQGARCMDCGTPFCQTGLPFGRETIGCPIGNYIPEWNDLVYHQDFKEAYERLSETNNFPEFTGRICPAPCEQSCVMKINRDSVAIKGIERTIIDEAYDNGWVKPKYPKEHKNQSVAIVGSGPAGLAAAEELNHLGYQVTVFERAAEPGGLLMYGIPNMKLDKTVVRRRIEIMREAGITFKTNTNIGVDITRDELEEQFDAIILCTGAQKARDLPLEGRMGQGIHFAMDYLTEQMQVLNGEIEEASITAKDKNVIVIGAGDTGADCVATALRENCKSIVQFNKYTKAPEEITFESNTSWPLALPVFKMDYAHKEYEARFGREPRAYGVQTMRYDVDAIGNIRGVYTQILEETPEGMVVVDGTERHWPADLVLLSIGFEGTETTVPRSFDIKTKQNKIVANEQDYRTNQEKVFAAGDARRGQSLVVWAIKEGRAVAKSVDQYLKQKVLA . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 4850 6313 . - 0 GCA_005502385.1_00474 GCA_005502385.1_00474_gene,GCA_005502385.1_00474_mRNA GCA_005502385.1_00474 Glutamate synthase [NADPH] small chain GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MGEFKGFMKYEKQSLAELSLIERLEGHEAFQQRFSREEASIQGARCMDCGTPFCQTGLPFGRETIGCPIGNYIPEWNDLVYHQDFKEAYERLSETNNFPEFTGRICPAPCEQSCVMKINRDSVAIKGIERTIIDEAYDNGWVKPKYPKEHKNQSVAIVGSGPAGLAAAEELNHLGYQVTVFERAAEPGGLLMYGIPNMKLDKTVVRRRIEIMREAGITFKTNTNIGVDITRDELEEQFDAIILCTGAQKARDLPLEGRMGQGIHFAMDYLTEQMQVLNGEIEEASITAKDKNVIVIGAGDTGADCVATALRENCKSIVQFNKYTKAPEEITFESNTSWPLALPVFKMDYAHKEYEARFGREPRAYGVQTMRYDVDAIGNIRGVYTQILEETPEGMVVVDGTERHWPADLVLLSIGFEGTETTVPRSFDIKTKQNKIVANEQDYRTNQEKVFAAGDARRGQSLVVWAIKEGRAVAKSVDQYLKQKVLA persistent 487 Glutamate synthase subunit beta WP_017175202.1 UPI0002FD8306 UniRef100_A0A4Q9WPB9,UniRef50_B9DLG4,UniRef90_A0A4Q9WPB9 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 6332 10840 . - . GCA_005502385.1_00475_gene GCA_005502385.1_00475 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MFKDRLKRGLYDYREEHDACGIGFYANMDNLRSHDIIEKSLEMLRRLDHRGGIGADGITGDGAGIMTEIPFEFLKKHTHFDLPNEGEYAIGLFFSNQKVSGTQHETVFNQYFNDEGLKVIGYRDVPVDTQALAEHVASTMPYVQQVFVDLNQHETPVKQLYLARKQIEQYAEREHLDLYFTSLSHKTIVYKGWLRSDQIKTLYLDLNNEDYQSKLGLVHSRFSTNTFPSWKRAHPNRLLMHNGEINTIKGNVNWMRARQRQLINTLFGKESEKIQNIVDEDGSDSAIVDNALEFLSLAMEPEEAAMLLIPEPWLYNKSNDEHVRAFYEFYSYLMEPWDGPTMISFCNGDKIGALTDRNGLRPGRYTITKDNFIVFSSEVGVIDVPEENVAFKGQLNPGKLLLVDFNSNKVIENNELKTHIAHKYPYKDWIDQYKIDLELDKVQYQRQLLDEATLFKVQKQFGYTKEDIHKYMTDLLIGKKDPIGAMGYDAPLAVLNERPESLFNYFKQLFAQVTNPPIDAYREKIVTSELSYLGSEGNLLHPEPNVLNRIQLTKPVLTLNQLDKIEQSKFNVKHLSTLYQDISLEEALNHIGEEAVQATKEGYTILVLDDSALINTTQSLHYAMPMLLAVSHIHQLLIKEDLRMSTSIVALSGETREVHHVACLLGYGANAVIPYLAQQTIAHLTDSHHLEGSISENVETYTNVLSEGVIKVMAKMGISTVQSYQGAQIFEAVGLSQNVIDTYFTGTQSKLSGLSIEQIDEENRKRQSNEEEYLASGSNFQWRQQGQHHVFNPTTIHLLQHACRENDYEQFKTFTNAVHENRHDHLRDLLEFKSQSSIPIEQVESVESIVKRFNTGAMSYGSISEEAHQTLAKAMNKLGGKSNSGEGGENPKRYVIQEDGSYLSSAIKQVASGRFGVTSEYLQHAKELQIKVAQGAKPGEGGQLPGTKVYPWIAETRGSTPGIGLISPPPHHDIYSIEDLAQLIHDLKNANKDADIAVKLVSKTGIGTIASGVAKAFADKIVVSGYDGGTGASPKTSIQHAGLPWELGLAETHQTLKLNDLRSRVRLETDGKLLTGRDVALACALGAEEFGFATAPLVVLGCIMMRVCHNDTCPVGIATQNKDLRALYRGKADHVVNFMHFVAEELREVLAELGLKTVEELVGRTDLLQRSRHINPKSKAASLDIEKLLHAVDGPNTKEIAQNHHLDIGFDLNYLYKEAKQSIENGETFKGQYTINNTQRNVGVITGSYITKQYGSKGLPEETIIAETMGHAGQSLGAFAPKGLLIHHTGDANDYVGKGLSGGTVVVKAPKHARENEIIAGNVCFYGASSGKAYINGSAGERFCIRNSGVDVVVEGIGDHGLEYMTGGHVVILGDVGKNFGQGMSGGVCYIFPSDIEAFKKANQLPTLAFKRVQHDEEKQLLKSMLEEHYRYTESTKAKDILNQFENVTEHVIKVIPKDYELMMQKIELQHRHLSEDNEAKLAAFYDHRTSIEKDLQPAVIY . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 6332 10840 . - . GCA_005502385.1_00475_mRNA GCA_005502385.1_00475 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MFKDRLKRGLYDYREEHDACGIGFYANMDNLRSHDIIEKSLEMLRRLDHRGGIGADGITGDGAGIMTEIPFEFLKKHTHFDLPNEGEYAIGLFFSNQKVSGTQHETVFNQYFNDEGLKVIGYRDVPVDTQALAEHVASTMPYVQQVFVDLNQHETPVKQLYLARKQIEQYAEREHLDLYFTSLSHKTIVYKGWLRSDQIKTLYLDLNNEDYQSKLGLVHSRFSTNTFPSWKRAHPNRLLMHNGEINTIKGNVNWMRARQRQLINTLFGKESEKIQNIVDEDGSDSAIVDNALEFLSLAMEPEEAAMLLIPEPWLYNKSNDEHVRAFYEFYSYLMEPWDGPTMISFCNGDKIGALTDRNGLRPGRYTITKDNFIVFSSEVGVIDVPEENVAFKGQLNPGKLLLVDFNSNKVIENNELKTHIAHKYPYKDWIDQYKIDLELDKVQYQRQLLDEATLFKVQKQFGYTKEDIHKYMTDLLIGKKDPIGAMGYDAPLAVLNERPESLFNYFKQLFAQVTNPPIDAYREKIVTSELSYLGSEGNLLHPEPNVLNRIQLTKPVLTLNQLDKIEQSKFNVKHLSTLYQDISLEEALNHIGEEAVQATKEGYTILVLDDSALINTTQSLHYAMPMLLAVSHIHQLLIKEDLRMSTSIVALSGETREVHHVACLLGYGANAVIPYLAQQTIAHLTDSHHLEGSISENVETYTNVLSEGVIKVMAKMGISTVQSYQGAQIFEAVGLSQNVIDTYFTGTQSKLSGLSIEQIDEENRKRQSNEEEYLASGSNFQWRQQGQHHVFNPTTIHLLQHACRENDYEQFKTFTNAVHENRHDHLRDLLEFKSQSSIPIEQVESVESIVKRFNTGAMSYGSISEEAHQTLAKAMNKLGGKSNSGEGGENPKRYVIQEDGSYLSSAIKQVASGRFGVTSEYLQHAKELQIKVAQGAKPGEGGQLPGTKVYPWIAETRGSTPGIGLISPPPHHDIYSIEDLAQLIHDLKNANKDADIAVKLVSKTGIGTIASGVAKAFADKIVVSGYDGGTGASPKTSIQHAGLPWELGLAETHQTLKLNDLRSRVRLETDGKLLTGRDVALACALGAEEFGFATAPLVVLGCIMMRVCHNDTCPVGIATQNKDLRALYRGKADHVVNFMHFVAEELREVLAELGLKTVEELVGRTDLLQRSRHINPKSKAASLDIEKLLHAVDGPNTKEIAQNHHLDIGFDLNYLYKEAKQSIENGETFKGQYTINNTQRNVGVITGSYITKQYGSKGLPEETIIAETMGHAGQSLGAFAPKGLLIHHTGDANDYVGKGLSGGTVVVKAPKHARENEIIAGNVCFYGASSGKAYINGSAGERFCIRNSGVDVVVEGIGDHGLEYMTGGHVVILGDVGKNFGQGMSGGVCYIFPSDIEAFKKANQLPTLAFKRVQHDEEKQLLKSMLEEHYRYTESTKAKDILNQFENVTEHVIKVIPKDYELMMQKIELQHRHLSEDNEAKLAAFYDHRTSIEKDLQPAVIY . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 6332 10840 . - 0 GCA_005502385.1_00475 GCA_005502385.1_00475_gene,GCA_005502385.1_00475_mRNA GCA_005502385.1_00475 Glutamate synthase [NADPH] large chain GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MFKDRLKRGLYDYREEHDACGIGFYANMDNLRSHDIIEKSLEMLRRLDHRGGIGADGITGDGAGIMTEIPFEFLKKHTHFDLPNEGEYAIGLFFSNQKVSGTQHETVFNQYFNDEGLKVIGYRDVPVDTQALAEHVASTMPYVQQVFVDLNQHETPVKQLYLARKQIEQYAEREHLDLYFTSLSHKTIVYKGWLRSDQIKTLYLDLNNEDYQSKLGLVHSRFSTNTFPSWKRAHPNRLLMHNGEINTIKGNVNWMRARQRQLINTLFGKESEKIQNIVDEDGSDSAIVDNALEFLSLAMEPEEAAMLLIPEPWLYNKSNDEHVRAFYEFYSYLMEPWDGPTMISFCNGDKIGALTDRNGLRPGRYTITKDNFIVFSSEVGVIDVPEENVAFKGQLNPGKLLLVDFNSNKVIENNELKTHIAHKYPYKDWIDQYKIDLELDKVQYQRQLLDEATLFKVQKQFGYTKEDIHKYMTDLLIGKKDPIGAMGYDAPLAVLNERPESLFNYFKQLFAQVTNPPIDAYREKIVTSELSYLGSEGNLLHPEPNVLNRIQLTKPVLTLNQLDKIEQSKFNVKHLSTLYQDISLEEALNHIGEEAVQATKEGYTILVLDDSALINTTQSLHYAMPMLLAVSHIHQLLIKEDLRMSTSIVALSGETREVHHVACLLGYGANAVIPYLAQQTIAHLTDSHHLEGSISENVETYTNVLSEGVIKVMAKMGISTVQSYQGAQIFEAVGLSQNVIDTYFTGTQSKLSGLSIEQIDEENRKRQSNEEEYLASGSNFQWRQQGQHHVFNPTTIHLLQHACRENDYEQFKTFTNAVHENRHDHLRDLLEFKSQSSIPIEQVESVESIVKRFNTGAMSYGSISEEAHQTLAKAMNKLGGKSNSGEGGENPKRYVIQEDGSYLSSAIKQVASGRFGVTSEYLQHAKELQIKVAQGAKPGEGGQLPGTKVYPWIAETRGSTPGIGLISPPPHHDIYSIEDLAQLIHDLKNANKDADIAVKLVSKTGIGTIASGVAKAFADKIVVSGYDGGTGASPKTSIQHAGLPWELGLAETHQTLKLNDLRSRVRLETDGKLLTGRDVALACALGAEEFGFATAPLVVLGCIMMRVCHNDTCPVGIATQNKDLRALYRGKADHVVNFMHFVAEELREVLAELGLKTVEELVGRTDLLQRSRHINPKSKAASLDIEKLLHAVDGPNTKEIAQNHHLDIGFDLNYLYKEAKQSIENGETFKGQYTINNTQRNVGVITGSYITKQYGSKGLPEETIIAETMGHAGQSLGAFAPKGLLIHHTGDANDYVGKGLSGGTVVVKAPKHARENEIIAGNVCFYGASSGKAYINGSAGERFCIRNSGVDVVVEGIGDHGLEYMTGGHVVILGDVGKNFGQGMSGGVCYIFPSDIEAFKKANQLPTLAFKRVQHDEEKQLLKSMLEEHYRYTESTKAKDILNQFENVTEHVIKVIPKDYELMMQKIELQHRHLSEDNEAKLAAFYDHRTSIEKDLQPAVIY persistent 1502 gltB glutamate synthase large subunit 1.4.1.13 GO:0003824,GO:0006537,GO:0008152,GO:0015930,GO:0016491 UniRef50_A0A2X2UM59,UniRef90_A0A3S7GYW4 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 10991 11887 . + . GCA_005502385.1_00476_gene GCA_005502385.1_00476 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MEIKQLRYFVEVARREHISEAALELNIAQSAISRQINLLEKELQVPLFDRQGRNIYLTSHGKALLTQATHILEQLDETVALFQQEQLKNAHHINLGFEESYASHMITPIIQTFEREYDSHIIPSLMNHTQIVDYLNSGKIDIAIVENTPELQANSTLSITSLYEETYHLYVPKDDAIALSFNPPLTQLKQFEKNPLYTLHDFPDSIKKRLESVIKVPIYTLGTKSLGKYLLKQRRGHLLLPDYISLDHSSEQLEDISLSHTELKRSFCVVFKKDNKKVDIFNLFHLIQTLLNKVSTYH . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 10991 11887 . + . GCA_005502385.1_00476_mRNA GCA_005502385.1_00476 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MEIKQLRYFVEVARREHISEAALELNIAQSAISRQINLLEKELQVPLFDRQGRNIYLTSHGKALLTQATHILEQLDETVALFQQEQLKNAHHINLGFEESYASHMITPIIQTFEREYDSHIIPSLMNHTQIVDYLNSGKIDIAIVENTPELQANSTLSITSLYEETYHLYVPKDDAIALSFNPPLTQLKQFEKNPLYTLHDFPDSIKKRLESVIKVPIYTLGTKSLGKYLLKQRRGHLLLPDYISLDHSSEQLEDISLSHTELKRSFCVVFKKDNKKVDIFNLFHLIQTLLNKVSTYH . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 10991 11887 . + 0 GCA_005502385.1_00476 GCA_005502385.1_00476_gene,GCA_005502385.1_00476_mRNA GCA_005502385.1_00476 HTH-type transcriptional regulator HdfR GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MEIKQLRYFVEVARREHISEAALELNIAQSAISRQINLLEKELQVPLFDRQGRNIYLTSHGKALLTQATHILEQLDETVALFQQEQLKNAHHINLGFEESYASHMITPIIQTFEREYDSHIIPSLMNHTQIVDYLNSGKIDIAIVENTPELQANSTLSITSLYEETYHLYVPKDDAIALSFNPPLTQLKQFEKNPLYTLHDFPDSIKKRLESVIKVPIYTLGTKSLGKYLLKQRRGHLLLPDYISLDHSSEQLEDISLSHTELKRSFCVVFKKDNKKVDIFNLFHLIQTLLNKVSTYH persistent 298 gltC glutamate biosynthesis transcriptional regulator GltC GO:0003700,GO:1902065 WP_054105586.1 UPI0006B9B220 UniRef100_UPI0006B9B220,UniRef50_A0A853V4Y0,UniRef90_A0A3S7GU64 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 12004 13125 . + . GCA_005502385.1_00477_gene GCA_005502385.1_00477 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MNIKTLHVSKIKNTHRLIIIVTFIMIGLFIFTFFNASFYQIPIGKITNIETSHGQKVTDEHHNTDTKYNQRLTIRILNGKYKNEITTVNNHFVKSQADSEQFAKNEKVLLHIQKGPSDATILEKKRDGLTVAIVGIFIVTLLIVGKNVGLQSILSLLFNTAFIIVSIGIHNTFSGTNLFLLMSIAIILSTILTLVLVTGWQKRTWVTIVATLSGTFLCVGITELLIQFTGGNGIKYETMSFLTLPPKDVFMSSVLIGTLGAVMDVAITISSGMYEILQRTPHISMARWALAGRHIGQDIMGTMTNILLFSYLSGSLAMVLIYLKNANTFTYTISMNWSLEMTRALTGGIGIVLTIPITIGLMVTIFKWKGVSR . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 12004 13125 . + . GCA_005502385.1_00477_mRNA GCA_005502385.1_00477 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MNIKTLHVSKIKNTHRLIIIVTFIMIGLFIFTFFNASFYQIPIGKITNIETSHGQKVTDEHHNTDTKYNQRLTIRILNGKYKNEITTVNNHFVKSQADSEQFAKNEKVLLHIQKGPSDATILEKKRDGLTVAIVGIFIVTLLIVGKNVGLQSILSLLFNTAFIIVSIGIHNTFSGTNLFLLMSIAIILSTILTLVLVTGWQKRTWVTIVATLSGTFLCVGITELLIQFTGGNGIKYETMSFLTLPPKDVFMSSVLIGTLGAVMDVAITISSGMYEILQRTPHISMARWALAGRHIGQDIMGTMTNILLFSYLSGSLAMVLIYLKNANTFTYTISMNWSLEMTRALTGGIGIVLTIPITIGLMVTIFKWKGVSR . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 12004 13125 . + 0 GCA_005502385.1_00477 GCA_005502385.1_00477_gene,GCA_005502385.1_00477_mRNA GCA_005502385.1_00477 hypothetical protein GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MNIKTLHVSKIKNTHRLIIIVTFIMIGLFIFTFFNASFYQIPIGKITNIETSHGQKVTDEHHNTDTKYNQRLTIRILNGKYKNEITTVNNHFVKSQADSEQFAKNEKVLLHIQKGPSDATILEKKRDGLTVAIVGIFIVTLLIVGKNVGLQSILSLLFNTAFIIVSIGIHNTFSGTNLFLLMSIAIILSTILTLVLVTGWQKRTWVTIVATLSGTFLCVGITELLIQFTGGNGIKYETMSFLTLPPKDVFMSSVLIGTLGAVMDVAITISSGMYEILQRTPHISMARWALAGRHIGQDIMGTMTNILLFSYLSGSLAMVLIYLKNANTFTYTISMNWSLEMTRALTGGIGIVLTIPITIGLMVTIFKWKGVSR persistent 373 YibE/F-like protein WP_049379449.1 UPI00066CA458 UniRef100_UPI00066CA458,UniRef50_Q2G0U4,UniRef90_A0AAE5JKY6 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 13122 13928 . + . GCA_005502385.1_00478_gene GCA_005502385.1_00478 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MTTIFLLALLLFILMVLLGGKKGLISYLTLFLNFIILIISIVFILFGMPIYLIAFTFCLVIAACNLFILNSYNIKTQAAFIGTIVTTVLLIIGVYLSVKFGHLQGFATEQQDETYIFSMNIDINMLQFSVFTIMLAVIAAVIDLTITISSPMYELNETNPNLSRKELFQSGMRVGREILATSANTIYLAYFGGQLTLFFWFFQLHYSFGHILNSKIFAQEFISILLGGIAVALSIPITAWVSARLIKYHQLKQTDHHITTSSLNEDIK . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 13122 13928 . + . GCA_005502385.1_00478_mRNA GCA_005502385.1_00478 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MTTIFLLALLLFILMVLLGGKKGLISYLTLFLNFIILIISIVFILFGMPIYLIAFTFCLVIAACNLFILNSYNIKTQAAFIGTIVTTVLLIIGVYLSVKFGHLQGFATEQQDETYIFSMNIDINMLQFSVFTIMLAVIAAVIDLTITISSPMYELNETNPNLSRKELFQSGMRVGREILATSANTIYLAYFGGQLTLFFWFFQLHYSFGHILNSKIFAQEFISILLGGIAVALSIPITAWVSARLIKYHQLKQTDHHITTSSLNEDIK . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 13122 13928 . + 0 GCA_005502385.1_00478 GCA_005502385.1_00478_gene,GCA_005502385.1_00478_mRNA GCA_005502385.1_00478 hypothetical protein GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MTTIFLLALLLFILMVLLGGKKGLISYLTLFLNFIILIISIVFILFGMPIYLIAFTFCLVIAACNLFILNSYNIKTQAAFIGTIVTTVLLIIGVYLSVKFGHLQGFATEQQDETYIFSMNIDINMLQFSVFTIMLAVIAAVIDLTITISSPMYELNETNPNLSRKELFQSGMRVGREILATSANTIYLAYFGGQLTLFFWFFQLHYSFGHILNSKIFAQEFISILLGGIAVALSIPITAWVSARLIKYHQLKQTDHHITTSSLNEDIK persistent 268 YibE/F family protein WP_049379448.1 UPI00066AB442 UniRef100_UPI00066AB442,UniRef50_Q2G0U5,UniRef90_A0A3S7GYA9 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 13995 14378 . - . GCA_005502385.1_00479_gene GCA_005502385.1_00479 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MIKCVCLVEETEDQILLVQVRHREKYYFPGGKIDEGETLLEAIQREIEEELLLHFSQDDFTYIGKVIGEAYPQPNTLTELNGFKVNRSINWNEVQIDNEVTDIRWFNKFDTQYIAPAVIKWIETFST . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 13995 14378 . - . GCA_005502385.1_00479_mRNA GCA_005502385.1_00479 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MIKCVCLVEETEDQILLVQVRHREKYYFPGGKIDEGETLLEAIQREIEEELLLHFSQDDFTYIGKVIGEAYPQPNTLTELNGFKVNRSINWNEVQIDNEVTDIRWFNKFDTQYIAPAVIKWIETFST . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 13995 14378 . - 0 GCA_005502385.1_00479 GCA_005502385.1_00479_gene,GCA_005502385.1_00479_mRNA GCA_005502385.1_00479 hypothetical protein GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MIKCVCLVEETEDQILLVQVRHREKYYFPGGKIDEGETLLEAIQREIEEELLLHFSQDDFTYIGKVIGEAYPQPNTLTELNGFKVNRSINWNEVQIDNEVTDIRWFNKFDTQYIAPAVIKWIETFST persistent 127 NUDIX domain-containing protein UniRef50_A0A2K4FBI9,UniRef90_A0A4Q9WNM3 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 14529 14807 . + . GCA_005502385.1_00480_gene GCA_005502385.1_00480 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MAKQSKLSRLSSLVSTAGFIVDGYNGLKYSAKNKNLVYLSLALSTAGTVFDFIVSMRSPRKFRKFTSFISFIVNVTRLASSFRKVKEDYHFE . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 14529 14807 . + . GCA_005502385.1_00480_mRNA GCA_005502385.1_00480 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MAKQSKLSRLSSLVSTAGFIVDGYNGLKYSAKNKNLVYLSLALSTAGTVFDFIVSMRSPRKFRKFTSFISFIVNVTRLASSFRKVKEDYHFE . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 14529 14807 . + 0 GCA_005502385.1_00480 GCA_005502385.1_00480_gene,GCA_005502385.1_00480_mRNA GCA_005502385.1_00480 hypothetical protein GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MAKQSKLSRLSSLVSTAGFIVDGYNGLKYSAKNKNLVYLSLALSTAGTVFDFIVSMRSPRKFRKFTSFISFIVNVTRLASSFRKVKEDYHFE persistent 92 Holin WP_048762529.1 UPI000660ABC7 UniRef100_UPI000660ABC7,UniRef50_A0A853V6I4,UniRef90_A0A3S7GYC9 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 14827 15044 . - . GCA_005502385.1_00481_gene GCA_005502385.1_00481 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 14827 15044 . - . GCA_005502385.1_00481_mRNA GCA_005502385.1_00481 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 . . . . . . . GCA_005502385.1|SCOV01000018.1 Infernal:001001 misc_RNA 14827 15044 76.5 - . GCA_005502385.1_00481 GCA_005502385.1_00481_gene,GCA_005502385.1_00481_mRNA GCA_005502385.1_00481 S35 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 15037 16026 . - . GCA_005502385.1_00482_gene GCA_005502385.1_00482 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MNKKVLATAIIGTGAFSTIFAHQAEAATTHTVKSGESLWSISNRYGITIAKLKSLNGLTSNLIFPNQVLTVSGSSSSHSYSNNSSSTYTVKSGDSLSSIASRYGTTYRHIMELNGLHSFLIFPGQTLKVSGTARSSSHPQSSSNSSSSSSYYTVRYGDSLSGIAWKYNTTYQNIMRLNGLNNFFIYPGQTLRVSGTASSSSNTNSTSSSSNYYYHTPIFNHRNLYDWGQCTWHVFNRRAQIGKGISTYWWNANNWDNAAARDGYRIDYHPTVGSIAQSDAGYYGHVAFVERVNSNGSILVSEMNFSAGPGILTYRTIPAYQVRQYKFIH . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 15037 16026 . - . GCA_005502385.1_00482_mRNA GCA_005502385.1_00482 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MNKKVLATAIIGTGAFSTIFAHQAEAATTHTVKSGESLWSISNRYGITIAKLKSLNGLTSNLIFPNQVLTVSGSSSSHSYSNNSSSTYTVKSGDSLSSIASRYGTTYRHIMELNGLHSFLIFPGQTLKVSGTARSSSHPQSSSNSSSSSSYYTVRYGDSLSGIAWKYNTTYQNIMRLNGLNNFFIYPGQTLRVSGTASSSSNTNSTSSSSNYYYHTPIFNHRNLYDWGQCTWHVFNRRAQIGKGISTYWWNANNWDNAAARDGYRIDYHPTVGSIAQSDAGYYGHVAFVERVNSNGSILVSEMNFSAGPGILTYRTIPAYQVRQYKFIH . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 15037 16026 . - 0 GCA_005502385.1_00482 GCA_005502385.1_00482_gene,GCA_005502385.1_00482_mRNA GCA_005502385.1_00482 N-acetylmuramoyl-L-alanine amidase sle1 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MNKKVLATAIIGTGAFSTIFAHQAEAATTHTVKSGESLWSISNRYGITIAKLKSLNGLTSNLIFPNQVLTVSGSSSSHSYSNNSSSTYTVKSGDSLSSIASRYGTTYRHIMELNGLHSFLIFPGQTLKVSGTARSSSHPQSSSNSSSSSSYYTVRYGDSLSGIAWKYNTTYQNIMRLNGLNNFFIYPGQTLRVSGTASSSSNTNSTSSSSNYYYHTPIFNHRNLYDWGQCTWHVFNRRAQIGKGISTYWWNANNWDNAAARDGYRIDYHPTVGSIAQSDAGYYGHVAFVERVNSNGSILVSEMNFSAGPGILTYRTIPAYQVRQYKFIH persistent 329 SAG1386/EF1546 family surface-associated protein WP_048762480.1 UPI000660B100 UniRef100_UPI000660B100,UniRef50_Q2G0U9,UniRef90_A0A974KZF9 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 16503 17345 . - . GCA_005502385.1_00483_gene GCA_005502385.1_00483 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MKRIIGLLLASIIVLAACSGGGNSKKVTVGVASNDTAAWEKVKELAKKDDIDLEIKHFSDYNVPNKALSDGDIDMNAFQHFAFLNEYKKAHKDAKIEAISTTVLAPLGIYSKKVKDIKDVKDGAQVMIPNDVSNQARALKLLESAGLIKLKDNFGLSGTTKDIKDNPKHLKIKEVDAQQTARALDDVDISVINNGVATKAGLDAKKDPIYLESSTSDAVKPYINLIAVNSKDKDNKTYKKIVDLYHSKEAQEALKKDTKDGEKAVDLSQKEIKDIEDSLK . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 16503 17345 . - . GCA_005502385.1_00483_mRNA GCA_005502385.1_00483 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MKRIIGLLLASIIVLAACSGGGNSKKVTVGVASNDTAAWEKVKELAKKDDIDLEIKHFSDYNVPNKALSDGDIDMNAFQHFAFLNEYKKAHKDAKIEAISTTVLAPLGIYSKKVKDIKDVKDGAQVMIPNDVSNQARALKLLESAGLIKLKDNFGLSGTTKDIKDNPKHLKIKEVDAQQTARALDDVDISVINNGVATKAGLDAKKDPIYLESSTSDAVKPYINLIAVNSKDKDNKTYKKIVDLYHSKEAQEALKKDTKDGEKAVDLSQKEIKDIEDSLK . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 16503 17345 . - 0 GCA_005502385.1_00483 GCA_005502385.1_00483_gene,GCA_005502385.1_00483_mRNA GCA_005502385.1_00483 putative D-methionine-binding lipoprotein MetQ GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MKRIIGLLLASIIVLAACSGGGNSKKVTVGVASNDTAAWEKVKELAKKDDIDLEIKHFSDYNVPNKALSDGDIDMNAFQHFAFLNEYKKAHKDAKIEAISTTVLAPLGIYSKKVKDIKDVKDGAQVMIPNDVSNQARALKLLESAGLIKLKDNFGLSGTTKDIKDNPKHLKIKEVDAQQTARALDDVDISVINNGVATKAGLDAKKDPIYLESSTSDAVKPYINLIAVNSKDKDNKTYKKIVDLYHSKEAQEALKKDTKDGEKAVDLSQKEIKDIEDSLK persistent 280 gmpC dipeptide ABC transporter glycylmethionine-binding lipoprotein WP_002448016.1 UPI00019FC27F UniRef100_A0A4Q9WNJ6,UniRef50_A0A2K4FBN2,UniRef90_A0A4Z1BM39 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 17387 18046 . - . GCA_005502385.1_00484_gene GCA_005502385.1_00484 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MFGSSIESSQLMQALYETLYMVTVSLIIGALIGIPLGILLVVTRKHGIWPNVVIHQILNPIINILRSIPFIILLIAIVPFTKLVAGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDDGIIEAAKAMGASPLQIIRHFLLPEALGSLVLAITTAIIGLIGSTAMAGAVGGGGIGDLALVYGYQRFDTLVIIITVVVLVIIVQIIQSLGNFISRIIRRN . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 17387 18046 . - . GCA_005502385.1_00484_mRNA GCA_005502385.1_00484 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MFGSSIESSQLMQALYETLYMVTVSLIIGALIGIPLGILLVVTRKHGIWPNVVIHQILNPIINILRSIPFIILLIAIVPFTKLVAGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDDGIIEAAKAMGASPLQIIRHFLLPEALGSLVLAITTAIIGLIGSTAMAGAVGGGGIGDLALVYGYQRFDTLVIIITVVVLVIIVQIIQSLGNFISRIIRRN . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 17387 18046 . - 0 GCA_005502385.1_00484 GCA_005502385.1_00484_gene,GCA_005502385.1_00484_mRNA GCA_005502385.1_00484 Methionine import system permease protein MetP GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MFGSSIESSQLMQALYETLYMVTVSLIIGALIGIPLGILLVVTRKHGIWPNVVIHQILNPIINILRSIPFIILLIAIVPFTKLVAGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDDGIIEAAKAMGASPLQIIRHFLLPEALGSLVLAITTAIIGLIGSTAMAGAVGGGGIGDLALVYGYQRFDTLVIIITVVVLVIIVQIIQSLGNFISRIIRRN persistent 219 metP Methionine ABC transporter, permease component COG2011,E WP_017175194.1 UPI0002F63EAF UniRef100_A0A4Q9WS33,UniRef50_S2XCZ2,UniRef90_A0A654CNQ3 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 18047 19069 . - . GCA_005502385.1_00485_gene GCA_005502385.1_00485 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MIEFQGVNKVFRKKRETIHALKDVSFKIDARDVFGVIGYSGAGKSTLVRLVNQLEQATEGHVIVDGHDINTYSEKELRNVKKDIGMIFQHFNLLNSKTVFKNVAMPLILSHKSNSEIKEKVEEMLEFVGLADKKNQFPDELSGGQKQRVAIARALVTNPKILLCDEATSALDPATTSSILQLLKNVNETFGVTIMMITHEMSVIQKICNRVAVMEHGEVVEIGTVKDVFSHPKTKTAQNFVSTVISTEPSKALRASFERADNHYTDYRLFLDKKQIDYPLMNELINQYGFNVNILFSSMSDIQDETICYLWLRFEHDAQFSRDTVESYFNERHIHYEEVR . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 18047 19069 . - . GCA_005502385.1_00485_mRNA GCA_005502385.1_00485 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MIEFQGVNKVFRKKRETIHALKDVSFKIDARDVFGVIGYSGAGKSTLVRLVNQLEQATEGHVIVDGHDINTYSEKELRNVKKDIGMIFQHFNLLNSKTVFKNVAMPLILSHKSNSEIKEKVEEMLEFVGLADKKNQFPDELSGGQKQRVAIARALVTNPKILLCDEATSALDPATTSSILQLLKNVNETFGVTIMMITHEMSVIQKICNRVAVMEHGEVVEIGTVKDVFSHPKTKTAQNFVSTVISTEPSKALRASFERADNHYTDYRLFLDKKQIDYPLMNELINQYGFNVNILFSSMSDIQDETICYLWLRFEHDAQFSRDTVESYFNERHIHYEEVR . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 18047 19069 . - 0 GCA_005502385.1_00485 GCA_005502385.1_00485_gene,GCA_005502385.1_00485_mRNA GCA_005502385.1_00485 Methionine import ATP-binding protein MetN GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MIEFQGVNKVFRKKRETIHALKDVSFKIDARDVFGVIGYSGAGKSTLVRLVNQLEQATEGHVIVDGHDINTYSEKELRNVKKDIGMIFQHFNLLNSKTVFKNVAMPLILSHKSNSEIKEKVEEMLEFVGLADKKNQFPDELSGGQKQRVAIARALVTNPKILLCDEATSALDPATTSSILQLLKNVNETFGVTIMMITHEMSVIQKICNRVAVMEHGEVVEIGTVKDVFSHPKTKTAQNFVSTVISTEPSKALRASFERADNHYTDYRLFLDKKQIDYPLMNELINQYGFNVNILFSSMSDIQDETICYLWLRFEHDAQFSRDTVESYFNERHIHYEEVR persistent 340 Methionine ABC transporter ATP-binding protein WP_002447973.1 UPI00019FC281 UniRef100_A0A533J0X2,UniRef50_Q2G0V2,UniRef90_A0A533J0X2 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 19289 20437 . - . GCA_005502385.1_00486_gene GCA_005502385.1_00486 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MKKKTQMIHGGHTTDDFTGAVTTPIYQTSTYLQDDIGDLRQGYEYSRTANPTRASIESVIANLENGKHGFAFGSGMAAISAVIMLLDKGDHLILNSDVYGGTYRALTKVFTRFGIDVDFVDTTNIENVKDYIKPETKMLYIETPSNPLLRVTDIRRAAEIAKENQLISVVDNTFMTPYYQNPLDFGIDIVLHSATKYIGGHSDVVAGLVATSNDELGERLAFISNSTGGVLGPQDSYLLIRGIKTLGLRMEQINRNVEGIVKMLQEHPSVQQVFHPSIESHLNHDIHIAQASGHTGVVAFEVKDTEAAKQLIRETHYFTLAESLGAVESLISVPALMTHASIPADVRAKEGITDGLVRLSIGIEDTEDLVQDLKQAIDTLNK . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 19289 20437 . - . GCA_005502385.1_00486_mRNA GCA_005502385.1_00486 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MKKKTQMIHGGHTTDDFTGAVTTPIYQTSTYLQDDIGDLRQGYEYSRTANPTRASIESVIANLENGKHGFAFGSGMAAISAVIMLLDKGDHLILNSDVYGGTYRALTKVFTRFGIDVDFVDTTNIENVKDYIKPETKMLYIETPSNPLLRVTDIRRAAEIAKENQLISVVDNTFMTPYYQNPLDFGIDIVLHSATKYIGGHSDVVAGLVATSNDELGERLAFISNSTGGVLGPQDSYLLIRGIKTLGLRMEQINRNVEGIVKMLQEHPSVQQVFHPSIESHLNHDIHIAQASGHTGVVAFEVKDTEAAKQLIRETHYFTLAESLGAVESLISVPALMTHASIPADVRAKEGITDGLVRLSIGIEDTEDLVQDLKQAIDTLNK . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 19289 20437 . - 0 GCA_005502385.1_00486 GCA_005502385.1_00486_gene,GCA_005502385.1_00486_mRNA GCA_005502385.1_00486 Cystathionine gamma-lyase GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MKKKTQMIHGGHTTDDFTGAVTTPIYQTSTYLQDDIGDLRQGYEYSRTANPTRASIESVIANLENGKHGFAFGSGMAAISAVIMLLDKGDHLILNSDVYGGTYRALTKVFTRFGIDVDFVDTTNIENVKDYIKPETKMLYIETPSNPLLRVTDIRRAAEIAKENQLISVVDNTFMTPYYQNPLDFGIDIVLHSATKYIGGHSDVVAGLVATSNDELGERLAFISNSTGGVLGPQDSYLLIRGIKTLGLRMEQINRNVEGIVKMLQEHPSVQQVFHPSIESHLNHDIHIAQASGHTGVVAFEVKDTEAAKQLIRETHYFTLAESLGAVESLISVPALMTHASIPADVRAKEGITDGLVRLSIGIEDTEDLVQDLKQAIDTLNK persistent 382 metC bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase 4.4.1.1,4.4.1.2 GO:0019346,GO:0030170 COG0626,E WP_017175193.1 UPI0002E06F59 UniRef100_A0A3S7GXQ5,UniRef50_Q1M0P5,UniRef90_A0A4V6KKY9 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 20440 21336 . - . GCA_005502385.1_00487_gene GCA_005502385.1_00487 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MITYDLIGQTPLVLLESFSDEHVQIYAKLEQFNPGGSIKDRLGKYLVETALKEKRIVKGDTIVEATAGNTGIGLAMAANRYHLKCVIFAPEGFSEEKISIMRVLGAEIKRTPKNKGMIGAQKEARHYADKYDAVYMNQFETEHNPEAYTHTLGKEITEALPHIDYFVAGAGSGGTFTGVAKHLQQFNVKNIIVEPEGSVLNGGKAHAHDIEGIGSEKWPVFLEKSIVDDIITVSDNQGFENVKRLAKQEGLLVGSSSGAALQGALDIKRRIDKGIIVTIFPDGSDRYMSKKIFEYKGE . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 20440 21336 . - . GCA_005502385.1_00487_mRNA GCA_005502385.1_00487 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MITYDLIGQTPLVLLESFSDEHVQIYAKLEQFNPGGSIKDRLGKYLVETALKEKRIVKGDTIVEATAGNTGIGLAMAANRYHLKCVIFAPEGFSEEKISIMRVLGAEIKRTPKNKGMIGAQKEARHYADKYDAVYMNQFETEHNPEAYTHTLGKEITEALPHIDYFVAGAGSGGTFTGVAKHLQQFNVKNIIVEPEGSVLNGGKAHAHDIEGIGSEKWPVFLEKSIVDDIITVSDNQGFENVKRLAKQEGLLVGSSSGAALQGALDIKRRIDKGIIVTIFPDGSDRYMSKKIFEYKGE . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 20440 21336 . - 0 GCA_005502385.1_00487 GCA_005502385.1_00487_gene,GCA_005502385.1_00487_mRNA GCA_005502385.1_00487 O-acetylserine dependent cystathionine beta-synthase GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MITYDLIGQTPLVLLESFSDEHVQIYAKLEQFNPGGSIKDRLGKYLVETALKEKRIVKGDTIVEATAGNTGIGLAMAANRYHLKCVIFAPEGFSEEKISIMRVLGAEIKRTPKNKGMIGAQKEARHYADKYDAVYMNQFETEHNPEAYTHTLGKEITEALPHIDYFVAGAGSGGTFTGVAKHLQQFNVKNIIVEPEGSVLNGGKAHAHDIEGIGSEKWPVFLEKSIVDDIITVSDNQGFENVKRLAKQEGLLVGSSSGAALQGALDIKRRIDKGIIVTIFPDGSDRYMSKKIFEYKGE persistent 298 Cysteine synthase family protein WP_017175192.1 UPI00030A2665 UniRef100_A0A4Q9WNJ9,UniRef50_Q2G0V4,UniRef90_A0A4Q9WNJ9 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 21589 22122 . + . GCA_005502385.1_00488_gene GCA_005502385.1_00488 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MMTSKADLSLSVFTKDDYKNLNYKNSTFRNSMYDEIEVNKSHFKHCDFSEGIFRNVSTISNSKIVNCNFDKSIFENVNFFKTLISKSNLTVTSFDENHFNTLTIEHSIFKNSNIRNVKFDNVTFKKVIFENVTMDLCHFENVKIKDCIFKHVTINNSSIPEKILKELHKQDVTFENM . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 21589 22122 . + . GCA_005502385.1_00488_mRNA GCA_005502385.1_00488 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MMTSKADLSLSVFTKDDYKNLNYKNSTFRNSMYDEIEVNKSHFKHCDFSEGIFRNVSTISNSKIVNCNFDKSIFENVNFFKTLISKSNLTVTSFDENHFNTLTIEHSIFKNSNIRNVKFDNVTFKKVIFENVTMDLCHFENVKIKDCIFKHVTINNSSIPEKILKELHKQDVTFENM . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 21589 22122 . + 0 GCA_005502385.1_00488 GCA_005502385.1_00488_gene,GCA_005502385.1_00488_mRNA GCA_005502385.1_00488 hypothetical protein """""" GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MMTSKADLSLSVFTKDDYKNLNYKNSTFRNSMYDEIEVNKSHFKHCDFSEGIFRNVSTISNSKIVNCNFDKSIFENVNFFKTLISKSNLTVTSFDENHFNTLTIEHSIFKNSNIRNVKFDNVTFKKVIFENVTMDLCHFENVKIKDCIFKHVTINNSSIPEKILKELHKQDVTFENM persistent 177 Pentapeptide repeat-containing protein UniRef50_Q5HRU9,UniRef90_A0AAE5JM79 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 22197 23525 . - . GCA_005502385.1_00489_gene GCA_005502385.1_00489 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MSNQSQWKTSTGFILASAGSAIGLGAMWKFPYMAGIYGGGAFLFLFLIFTIFVGLPLLIMEFTVGIMGRTYTTRIYSKLTGKKWLNIIGWNGNLAVFILFGFYSVIGGWIVIYIGNVFLQLLSVEHTSLTQIKFEKIISNPWLTVLGQGIFILLTMIIVMLGVEKGLEKASKIMMPLLFVFLIIVVAKSLTLDGALEGVRYILQPRIEDISVKGVLFALGQSFFTLSLGTTGMITYASYAPKEMTIKSSAISIVIMNILVSVLAGLAIFPALKTFGYAPQEGPGLLFKVLPLVFNQMGFGIVFYLIFLILFLFAALTSSISLLELNVSNFTKNDNTKRKAISVIASILVFIISIPATLSFSSLSGIKFGAGTIFDNMDFIVSNILMPLGALGTTLVVGQLLDKQALKESFGKDKFKLFVPWYILIKYMMPIIIILVFIVQLF . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 22197 23525 . - . GCA_005502385.1_00489_mRNA GCA_005502385.1_00489 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MSNQSQWKTSTGFILASAGSAIGLGAMWKFPYMAGIYGGGAFLFLFLIFTIFVGLPLLIMEFTVGIMGRTYTTRIYSKLTGKKWLNIIGWNGNLAVFILFGFYSVIGGWIVIYIGNVFLQLLSVEHTSLTQIKFEKIISNPWLTVLGQGIFILLTMIIVMLGVEKGLEKASKIMMPLLFVFLIIVVAKSLTLDGALEGVRYILQPRIEDISVKGVLFALGQSFFTLSLGTTGMITYASYAPKEMTIKSSAISIVIMNILVSVLAGLAIFPALKTFGYAPQEGPGLLFKVLPLVFNQMGFGIVFYLIFLILFLFAALTSSISLLELNVSNFTKNDNTKRKAISVIASILVFIISIPATLSFSSLSGIKFGAGTIFDNMDFIVSNILMPLGALGTTLVVGQLLDKQALKESFGKDKFKLFVPWYILIKYMMPIIIILVFIVQLF . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 22197 23525 . - 0 GCA_005502385.1_00489 GCA_005502385.1_00489_gene,GCA_005502385.1_00489_mRNA GCA_005502385.1_00489 hypothetical protein GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MSNQSQWKTSTGFILASAGSAIGLGAMWKFPYMAGIYGGGAFLFLFLIFTIFVGLPLLIMEFTVGIMGRTYTTRIYSKLTGKKWLNIIGWNGNLAVFILFGFYSVIGGWIVIYIGNVFLQLLSVEHTSLTQIKFEKIISNPWLTVLGQGIFILLTMIIVMLGVEKGLEKASKIMMPLLFVFLIIVVAKSLTLDGALEGVRYILQPRIEDISVKGVLFALGQSFFTLSLGTTGMITYASYAPKEMTIKSSAISIVIMNILVSVLAGLAIFPALKTFGYAPQEGPGLLFKVLPLVFNQMGFGIVFYLIFLILFLFAALTSSISLLELNVSNFTKNDNTKRKAISVIASILVFIISIPATLSFSSLSGIKFGAGTIFDNMDFIVSNILMPLGALGTTLVVGQLLDKQALKESFGKDKFKLFVPWYILIKYMMPIIIILVFIVQLF persistent 442 Transporter WP_017175190.1 UPI0003075E01 UniRef100_A0A4Q9WNJ2,UniRef50_A0A654CN93,UniRef90_A0A3S7GUI5 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 23689 23937 . - . GCA_005502385.1_00490_gene GCA_005502385.1_00490 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MKRTFLLIYTTVSRTTYKEFKTFQDGPDYDTCIQRIIDEFDELAYLFLKDDSQVYYINVDHIESLNIQEVDEGQSIIYDFEK . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 23689 23937 . - . GCA_005502385.1_00490_mRNA GCA_005502385.1_00490 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MKRTFLLIYTTVSRTTYKEFKTFQDGPDYDTCIQRIIDEFDELAYLFLKDDSQVYYINVDHIESLNIQEVDEGQSIIYDFEK . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 23689 23937 . - 0 GCA_005502385.1_00490 GCA_005502385.1_00490_gene,GCA_005502385.1_00490_mRNA GCA_005502385.1_00490 hypothetical protein GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MKRTFLLIYTTVSRTTYKEFKTFQDGPDYDTCIQRIIDEFDELAYLFLKDDSQVYYINVDHIESLNIQEVDEGQSIIYDFEK persistent 82 Phage protein UniRef50_Q5HRV1,UniRef90_A0A974KXY1 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 23950 24681 . - . GCA_005502385.1_00491_gene GCA_005502385.1_00491 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MKIKSPHPIYLEGSRKEAILLLHSFTGTVRDVKPLAKALNEENFTCFAPNYQGHGLPLDQFTQFTIQDWWNDVLEGYQFLKNKGFDTIFVTGISLGGLFTLKLAELFDVSKIAVMSAPSEKEEKSIAWRMERYGQRMNQLLKFDETTSQQQLGTIQDYQPHIAEFKAFIEIISNELERIHVPARILYGGNDDAFYQNSAHYIFNHIDSNNKDLTCHPLSRHLMTYGDGHEDVITQVVTFFKSE . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 23950 24681 . - . GCA_005502385.1_00491_mRNA GCA_005502385.1_00491 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MKIKSPHPIYLEGSRKEAILLLHSFTGTVRDVKPLAKALNEENFTCFAPNYQGHGLPLDQFTQFTIQDWWNDVLEGYQFLKNKGFDTIFVTGISLGGLFTLKLAELFDVSKIAVMSAPSEKEEKSIAWRMERYGQRMNQLLKFDETTSQQQLGTIQDYQPHIAEFKAFIEIISNELERIHVPARILYGGNDDAFYQNSAHYIFNHIDSNNKDLTCHPLSRHLMTYGDGHEDVITQVVTFFKSE . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 23950 24681 . - 0 GCA_005502385.1_00491 GCA_005502385.1_00491_gene,GCA_005502385.1_00491_mRNA GCA_005502385.1_00491 Carboxylesterase GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MKIKSPHPIYLEGSRKEAILLLHSFTGTVRDVKPLAKALNEENFTCFAPNYQGHGLPLDQFTQFTIQDWWNDVLEGYQFLKNKGFDTIFVTGISLGGLFTLKLAELFDVSKIAVMSAPSEKEEKSIAWRMERYGQRMNQLLKFDETTSQQQLGTIQDYQPHIAEFKAFIEIISNELERIHVPARILYGGNDDAFYQNSAHYIFNHIDSNNKDLTCHPLSRHLMTYGDGHEDVITQVVTFFKSE persistent 243 Carboxylesterase WP_017175188.1 UPI0002EE4B61 UniRef100_A0A4Q9WNN3,UniRef50_A0A853V466,UniRef90_A0A974QNK4 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 24727 25398 . - . GCA_005502385.1_00492_gene GCA_005502385.1_00492 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MKNKLEVSPTKTISMFVIGLIIFIITAMNVIYHTTLMQKLDLNSLHELTNYFGKPRRHYDGTIWHKMMTFCANFGEVKSILYITLFLALILIFKNYKLSLWLLVTIYTGTYVNFLIKQIIARPRPYNHLLVDHGYSFPSGHSNASTLFALAILLVVIPLIKNKAIRYSIAIVVVIFWIGVLSCRLYFHAHYLTDVIGGFSLGMIWVALFSMTLPLFNIKLRKK . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 24727 25398 . - . GCA_005502385.1_00492_mRNA GCA_005502385.1_00492 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MKNKLEVSPTKTISMFVIGLIIFIITAMNVIYHTTLMQKLDLNSLHELTNYFGKPRRHYDGTIWHKMMTFCANFGEVKSILYITLFLALILIFKNYKLSLWLLVTIYTGTYVNFLIKQIIARPRPYNHLLVDHGYSFPSGHSNASTLFALAILLVVIPLIKNKAIRYSIAIVVVIFWIGVLSCRLYFHAHYLTDVIGGFSLGMIWVALFSMTLPLFNIKLRKK . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 24727 25398 . - 0 GCA_005502385.1_00492 GCA_005502385.1_00492_gene,GCA_005502385.1_00492_mRNA GCA_005502385.1_00492 hypothetical protein GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MKNKLEVSPTKTISMFVIGLIIFIITAMNVIYHTTLMQKLDLNSLHELTNYFGKPRRHYDGTIWHKMMTFCANFGEVKSILYITLFLALILIFKNYKLSLWLLVTIYTGTYVNFLIKQIIARPRPYNHLLVDHGYSFPSGHSNASTLFALAILLVVIPLIKNKAIRYSIAIVVVIFWIGVLSCRLYFHAHYLTDVIGGFSLGMIWVALFSMTLPLFNIKLRKK persistent 223 PAP2 family protein UniRef50_A0A380G202,UniRef90_A0A974QNN0 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 25762 26124 . - . GCA_005502385.1_00493_gene GCA_005502385.1_00493 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MTKSKGMYEAEISKAITQWEKDFLGRGSLSVKTDILRDMIIVNLQGILTPAEYRVCENQEGLLNIKRTRSELVESGQDDLMQLVFKITGTEVKSFHSDLSTITGERIIVFKLDKNLEKSL . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 25762 26124 . - . GCA_005502385.1_00493_mRNA GCA_005502385.1_00493 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MTKSKGMYEAEISKAITQWEKDFLGRGSLSVKTDILRDMIIVNLQGILTPAEYRVCENQEGLLNIKRTRSELVESGQDDLMQLVFKITGTEVKSFHSDLSTITGERIIVFKLDKNLEKSL . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 25762 26124 . - 0 GCA_005502385.1_00493 GCA_005502385.1_00493_gene,GCA_005502385.1_00493_mRNA GCA_005502385.1_00493 hypothetical protein GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MTKSKGMYEAEISKAITQWEKDFLGRGSLSVKTDILRDMIIVNLQGILTPAEYRVCENQEGLLNIKRTRSELVESGQDDLMQLVFKITGTEVKSFHSDLSTITGERIIVFKLDKNLEKSL persistent 120 DUF2294 domain-containing protein WP_048681332.1 UPI0006613AA6 UniRef100_UPI0006613AA6,UniRef50_A0A7U7PXA8,UniRef90_A0A4Q9WWT4 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 26193 28754 . - . GCA_005502385.1_00494_gene GCA_005502385.1_00494 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MTINIEDVVQSARRVITPLSPISIFAARNPWEELEYQTFDQVAQWFKHVRDIDLYPSHASVMTALENGEIDKHIVEEEVQQAIQSYKTDIPKTHVDTYCKNAMNIKDIPRDLITKEAYLKLEVSKLKKVFENESFAYARSKSANAFNAKGESLMDELNTHIIKWSKLYLDTFQSSWTMPKREEGFYVAWLHLAKYDPMLTKTQRKMIKMLPHNYEDALIMALNHLDIAEDEYEFYLTGHLLSLPGWAGMMYYRAEKHEHEKDLLTQYLAIRLTMECILLDTEKMSRPAVLNVEKRIKELVSKWLYYGEMTIDEWAEMSIEGQIEHLKFAHDFNPLYFKKLWLEAWEETHERKLVEMIYDKSVKRDKQPTKVQLAFCIDVRSEPFRRHLENQGPFETIGIAGFFGLPIRKKALDEQFSHDSLPVMVPPAYTIKEYAERHALNTYNQQQHSITSMFYTFKLMKNNVLPSLLLPELSGPFLSLNTLASTLMPKKTGVFIRKLTKNWLKKPNAKLTIDRDHHVHSDLPVGFTEEEQIAFTKQALQLMDLTTNFAPLVVLGGHGSETNNNPYHASLECGACGGASSGFNAKLLAMMCNLPLVRQGLAAEGIHIPDETVFVAAEHKTSIDELEWIYVPSLTSEAKKAFDILEEAMPRVSYHANLERLAQLPRLSDRELKHPIAEAHRFANDWSEIRPEWGLARNAEFIIGQRSITEGSNLEGRAFLHNYDYAKDPDGQLLNTIISGPALVAQWINLQYYASTVAPHFYGSGNKTTQSVTSGVGVMQGNSSDLLAGLPWQSVMAGDNKIYHAPIRLLVVIQAPDRYIQRLLNDNIKFKQKVDHQWVRLASIDEKGSFKDW . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 26193 28754 . - . GCA_005502385.1_00494_mRNA GCA_005502385.1_00494 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MTINIEDVVQSARRVITPLSPISIFAARNPWEELEYQTFDQVAQWFKHVRDIDLYPSHASVMTALENGEIDKHIVEEEVQQAIQSYKTDIPKTHVDTYCKNAMNIKDIPRDLITKEAYLKLEVSKLKKVFENESFAYARSKSANAFNAKGESLMDELNTHIIKWSKLYLDTFQSSWTMPKREEGFYVAWLHLAKYDPMLTKTQRKMIKMLPHNYEDALIMALNHLDIAEDEYEFYLTGHLLSLPGWAGMMYYRAEKHEHEKDLLTQYLAIRLTMECILLDTEKMSRPAVLNVEKRIKELVSKWLYYGEMTIDEWAEMSIEGQIEHLKFAHDFNPLYFKKLWLEAWEETHERKLVEMIYDKSVKRDKQPTKVQLAFCIDVRSEPFRRHLENQGPFETIGIAGFFGLPIRKKALDEQFSHDSLPVMVPPAYTIKEYAERHALNTYNQQQHSITSMFYTFKLMKNNVLPSLLLPELSGPFLSLNTLASTLMPKKTGVFIRKLTKNWLKKPNAKLTIDRDHHVHSDLPVGFTEEEQIAFTKQALQLMDLTTNFAPLVVLGGHGSETNNNPYHASLECGACGGASSGFNAKLLAMMCNLPLVRQGLAAEGIHIPDETVFVAAEHKTSIDELEWIYVPSLTSEAKKAFDILEEAMPRVSYHANLERLAQLPRLSDRELKHPIAEAHRFANDWSEIRPEWGLARNAEFIIGQRSITEGSNLEGRAFLHNYDYAKDPDGQLLNTIISGPALVAQWINLQYYASTVAPHFYGSGNKTTQSVTSGVGVMQGNSSDLLAGLPWQSVMAGDNKIYHAPIRLLVVIQAPDRYIQRLLNDNIKFKQKVDHQWVRLASIDEKGSFKDW . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 26193 28754 . - 0 GCA_005502385.1_00494 GCA_005502385.1_00494_gene,GCA_005502385.1_00494_mRNA GCA_005502385.1_00494 hypothetical protein GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MTINIEDVVQSARRVITPLSPISIFAARNPWEELEYQTFDQVAQWFKHVRDIDLYPSHASVMTALENGEIDKHIVEEEVQQAIQSYKTDIPKTHVDTYCKNAMNIKDIPRDLITKEAYLKLEVSKLKKVFENESFAYARSKSANAFNAKGESLMDELNTHIIKWSKLYLDTFQSSWTMPKREEGFYVAWLHLAKYDPMLTKTQRKMIKMLPHNYEDALIMALNHLDIAEDEYEFYLTGHLLSLPGWAGMMYYRAEKHEHEKDLLTQYLAIRLTMECILLDTEKMSRPAVLNVEKRIKELVSKWLYYGEMTIDEWAEMSIEGQIEHLKFAHDFNPLYFKKLWLEAWEETHERKLVEMIYDKSVKRDKQPTKVQLAFCIDVRSEPFRRHLENQGPFETIGIAGFFGLPIRKKALDEQFSHDSLPVMVPPAYTIKEYAERHALNTYNQQQHSITSMFYTFKLMKNNVLPSLLLPELSGPFLSLNTLASTLMPKKTGVFIRKLTKNWLKKPNAKLTIDRDHHVHSDLPVGFTEEEQIAFTKQALQLMDLTTNFAPLVVLGGHGSETNNNPYHASLECGACGGASSGFNAKLLAMMCNLPLVRQGLAAEGIHIPDETVFVAAEHKTSIDELEWIYVPSLTSEAKKAFDILEEAMPRVSYHANLERLAQLPRLSDRELKHPIAEAHRFANDWSEIRPEWGLARNAEFIIGQRSITEGSNLEGRAFLHNYDYAKDPDGQLLNTIISGPALVAQWINLQYYASTVAPHFYGSGNKTTQSVTSGVGVMQGNSSDLLAGLPWQSVMAGDNKIYHAPIRLLVVIQAPDRYIQRLLNDNIKFKQKVDHQWVRLASIDEKGSFKDW persistent 853 dabA putative inorganic carbon transporter subunit DabA WP_017175186.1 UPI00031FA829 UniRef100_A0A4Q9WNK5,UniRef50_Q2G0W1,UniRef90_A0A4Q9WNK5 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 28770 30269 . - . GCA_005502385.1_00495_gene GCA_005502385.1_00495 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MLSMNSLLILFFITLIMAALSGLIVLIPSVPVKYIRFHLALLLLPVIVGIVGLVTINEREVIGIFALDKLAWLVGAFVLALGFIIQKFSTRYLLGDHNYRKYFPLYTFITVFASLGWLSNDLRLMTLCWGLTLFCLTQLIRLNKTWKVPAEAAKVSARSFIIGWLALLIAVILLYIGTGEWTIDPSQNYDYALNHGLKLVIDLLLVVAVIIPAAQYPFQSWLIESVVAPTPVSAIMHAGIVNAGGIILTRFSPIFDNSIALTILLIISSISVLIGSGISLVHVDYKRQLVGSTMSQMGFMLVQCAMGVYSAAIIHLILHGIFKATLFLQSGSVVRRFNIPTPPNIKKSYGWIILGRALALIIAIVFFMTSDHSPYILISAFILAWSISVSWNQLVALNKGVMGRFIGITMIVVVAMVYIMTHQVFVNILHHVYMAPAHPPLISIIISIAILVLGSIFSIWVARHRTSTAFAKVYLWLIKIGEAKFKSVESHPNYLKKYL . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 28770 30269 . - . GCA_005502385.1_00495_mRNA GCA_005502385.1_00495 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MLSMNSLLILFFITLIMAALSGLIVLIPSVPVKYIRFHLALLLLPVIVGIVGLVTINEREVIGIFALDKLAWLVGAFVLALGFIIQKFSTRYLLGDHNYRKYFPLYTFITVFASLGWLSNDLRLMTLCWGLTLFCLTQLIRLNKTWKVPAEAAKVSARSFIIGWLALLIAVILLYIGTGEWTIDPSQNYDYALNHGLKLVIDLLLVVAVIIPAAQYPFQSWLIESVVAPTPVSAIMHAGIVNAGGIILTRFSPIFDNSIALTILLIISSISVLIGSGISLVHVDYKRQLVGSTMSQMGFMLVQCAMGVYSAAIIHLILHGIFKATLFLQSGSVVRRFNIPTPPNIKKSYGWIILGRALALIIAIVFFMTSDHSPYILISAFILAWSISVSWNQLVALNKGVMGRFIGITMIVVVAMVYIMTHQVFVNILHHVYMAPAHPPLISIIISIAILVLGSIFSIWVARHRTSTAFAKVYLWLIKIGEAKFKSVESHPNYLKKYL . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 28770 30269 . - 0 GCA_005502385.1_00495 GCA_005502385.1_00495_gene,GCA_005502385.1_00495_mRNA GCA_005502385.1_00495 NAD(P)H-quinone oxidoreductase subunit 2%2C chloroplastic GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MLSMNSLLILFFITLIMAALSGLIVLIPSVPVKYIRFHLALLLLPVIVGIVGLVTINEREVIGIFALDKLAWLVGAFVLALGFIIQKFSTRYLLGDHNYRKYFPLYTFITVFASLGWLSNDLRLMTLCWGLTLFCLTQLIRLNKTWKVPAEAAKVSARSFIIGWLALLIAVILLYIGTGEWTIDPSQNYDYALNHGLKLVIDLLLVVAVIIPAAQYPFQSWLIESVVAPTPVSAIMHAGIVNAGGIILTRFSPIFDNSIALTILLIISSISVLIGSGISLVHVDYKRQLVGSTMSQMGFMLVQCAMGVYSAAIIHLILHGIFKATLFLQSGSVVRRFNIPTPPNIKKSYGWIILGRALALIIAIVFFMTSDHSPYILISAFILAWSISVSWNQLVALNKGVMGRFIGITMIVVVAMVYIMTHQVFVNILHHVYMAPAHPPLISIIISIAILVLGSIFSIWVARHRTSTAFAKVYLWLIKIGEAKFKSVESHPNYLKKYL persistent 499 NADH dehydrogenase subunit 5 1.6.5.9 UniRef50_Q2G0W2,UniRef90_A0A4Q9WS43 . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka gene 30902 31585 . + . GCA_005502385.1_00496_gene GCA_005502385.1_00496 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MQNKQYTLTISFIISSLIFLITIFSVFTKSLWTHILDLQSFYWFLNTFGEPKMNFKGNWFNDFMTFLASYGDIATFITLTLIIATIVLIKRRFLLAIWLPTTVASAGIIGIALKDIIHHSRPYDHLTIDAGFSFPSGHALTSTIVIFALIFVLIPKLGTIWVKRIINTVLIVVWLGILFSRLYFHAHYLTDVVGGIFFSFSWLFISLMVYQYILQKVHHRTSLQQRR . . . . . . . GCA_005502385.1|SCOV01000018.1 prokka mRNA 30902 31585 . + . GCA_005502385.1_00496_mRNA GCA_005502385.1_00496 GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MQNKQYTLTISFIISSLIFLITIFSVFTKSLWTHILDLQSFYWFLNTFGEPKMNFKGNWFNDFMTFLASYGDIATFITLTLIIATIVLIKRRFLLAIWLPTTVASAGIIGIALKDIIHHSRPYDHLTIDAGFSFPSGHALTSTIVIFALIFVLIPKLGTIWVKRIINTVLIVVWLGILFSRLYFHAHYLTDVVGGIFFSFSWLFISLMVYQYILQKVHHRTSLQQRR . . . . . . . GCA_005502385.1|SCOV01000018.1 Prodigal:002006 CDS 30902 31585 . + 0 GCA_005502385.1_00496 GCA_005502385.1_00496_gene,GCA_005502385.1_00496_mRNA GCA_005502385.1_00496 hypothetical protein GCA_005502385.1 SCOV01000018.1 GCA_005502385.1|SCOV01000018.1 GCA_005502385.1_SCOV01000018.1 MQNKQYTLTISFIISSLIFLITIFSVFTKSLWTHILDLQSFYWFLNTFGEPKMNFKGNWFNDFMTFLASYGDIATFITLTLIIATIVLIKRRFLLAIWLPTTVASAGIIGIALKDIIHHSRPYDHLTIDAGFSFPSGHALTSTIVIFALIFVLIPKLGTIWVKRIINTVLIVVWLGILFSRLYFHAHYLTDVVGGIFFSFSWLFISLMVYQYILQKVHHRTSLQQRR persistent 227 PA-phosphatase WP_037541622.1 UPI00044DB44B UniRef100_A0A8X8KIY3,UniRef50_A0A5B2YWJ4,UniRef90_A0AAE5JMI0 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 133 423 . - . GCA_005502385.1_00497_gene GCA_005502385.1_00497 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MNTIVKHTVGFIASIVLTLLAVFVTLYTNMTFHAKTTIIFGFAFIQAALQLLMFMHLTEGKDGRLQSAKVIFAIIITLITVIGTYWVMQGGHSSHL . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 133 423 . - . GCA_005502385.1_00497_mRNA GCA_005502385.1_00497 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MNTIVKHTVGFIASIVLTLLAVFVTLYTNMTFHAKTTIIFGFAFIQAALQLLMFMHLTEGKDGRLQSAKVIFAIIITLITVIGTYWVMQGGHSSHL . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 133 423 . - 0 GCA_005502385.1_00497 GCA_005502385.1_00497_gene,GCA_005502385.1_00497_mRNA GCA_005502385.1_00497 Quinol oxidase subunit 4 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MNTIVKHTVGFIASIVLTLLAVFVTLYTNMTFHAKTTIIFGFAFIQAALQLLMFMHLTEGKDGRLQSAKVIFAIIITLITVIGTYWVMQGGHSSHL persistent 96 qoxD cytochrome aa3 quinol oxidase subunit IV 1.10.3.- GO:0005886,GO:0009319,GO:0009486,GO:0015078,GO:0015990,GO:0016020,GO:0016682,GO:0019646,GO:0042773 C,COG3125 WP_002448242.1 UPI00019FC87E UniRef100_A0A1L8Y6N1,UniRef50_Q2FZK2,UniRef90_Q5HQB2 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 420 1025 . - . GCA_005502385.1_00498_gene GCA_005502385.1_00498 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSHDTNTIDSRTHEGQLNKLGFWIFLTAEFALFGTLFAALLTLQHGGGYGGKLTTELFELPLVLIMTFALLISSYTCGISIYYLRKEEKGKMMFWMILTVILGLVFVGFEIYEFAHYASEGVTPKVGSYWSSFFILLGTHGAHVSLGIGWIICLLIQVATRGLNKFNAPKLFIVSLYWHFLDVVWIFIFTAVYMIGMVYSG . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 420 1025 . - . GCA_005502385.1_00498_mRNA GCA_005502385.1_00498 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSHDTNTIDSRTHEGQLNKLGFWIFLTAEFALFGTLFAALLTLQHGGGYGGKLTTELFELPLVLIMTFALLISSYTCGISIYYLRKEEKGKMMFWMILTVILGLVFVGFEIYEFAHYASEGVTPKVGSYWSSFFILLGTHGAHVSLGIGWIICLLIQVATRGLNKFNAPKLFIVSLYWHFLDVVWIFIFTAVYMIGMVYSG . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 420 1025 . - 0 GCA_005502385.1_00498 GCA_005502385.1_00498_gene,GCA_005502385.1_00498_mRNA GCA_005502385.1_00498 Quinol oxidase subunit 3 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSHDTNTIDSRTHEGQLNKLGFWIFLTAEFALFGTLFAALLTLQHGGGYGGKLTTELFELPLVLIMTFALLISSYTCGISIYYLRKEEKGKMMFWMILTVILGLVFVGFEIYEFAHYASEGVTPKVGSYWSSFFILLGTHGAHVSLGIGWIICLLIQVATRGLNKFNAPKLFIVSLYWHFLDVVWIFIFTAVYMIGMVYSG persistent 201 qoxC cytochrome aa3 quinol oxidase subunit III 1.10.3.- GO:0004129,GO:0005886,GO:0009055,GO:0015078,GO:0015990,GO:0016020,GO:0016682,GO:0019646,GO:0042773 C,COG1845 WP_017175778.1 UPI00030F3721 UniRef100_A0A4Q9WUX9,UniRef50_P34958,UniRef90_Q4L563 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 1015 3003 . - . GCA_005502385.1_00499_gene GCA_005502385.1_00499 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MNFPWDELLVKGNWMITMAQIGAPFLVIGLIAVITYFKLWKYLYKEWFTSVDHKKIGLMYLICAVLMFVRGGIDALLLRTQLTIPDNTFLESNHYNEIFSTHGVIMIIFMAMPFVFGLWNVVVPLQIGARDVAFPVMNNISFWLFFVGMILFNLSFIVGGSPAAGWTNYAPLAGEFSPGPGVNYYLVAIQISGIGTLMTGINFFVTILRCKTPTMKFMQMPMFTVTTFITTLIVILAFPVFTVVLALMTADRVFGTHFFTVADGGMPMLWANFFWVWGHPEVYIVILPAFGIYSEIIPTFARKRLFGHQSMVWATAGIAFLSFLVWVHHFFTMGNGALINSFFSISTMLIGVPTGVKLFNWLLTLYKGRITFESPMLFSLAFIPNFLLGGVTGVMLAMASADYQYHNTYFLVAHFHYTLVTGVVFACLAGLIFWYPKMMGYKLNEKLNKWAFWLFMIGFNVCFLPQFILGLDGMPRRLYTYMPSDGWWLLNFISTIGALMMAVGFLFLVASIIYSHIKSPREATGDNWDGLGRTLEWSTASAIPPKYNFAITPDWNDYDTFVDMKEHGRHFLDNHNYKDIHMPNNTHTGVFMGIFMLVGGFFLIFESIIPFLICVAGIFGTMIYQSFVQDHGYHIPASEVAENEARLREARIKEREAVGHES . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 1015 3003 . - . GCA_005502385.1_00499_mRNA GCA_005502385.1_00499 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MNFPWDELLVKGNWMITMAQIGAPFLVIGLIAVITYFKLWKYLYKEWFTSVDHKKIGLMYLICAVLMFVRGGIDALLLRTQLTIPDNTFLESNHYNEIFSTHGVIMIIFMAMPFVFGLWNVVVPLQIGARDVAFPVMNNISFWLFFVGMILFNLSFIVGGSPAAGWTNYAPLAGEFSPGPGVNYYLVAIQISGIGTLMTGINFFVTILRCKTPTMKFMQMPMFTVTTFITTLIVILAFPVFTVVLALMTADRVFGTHFFTVADGGMPMLWANFFWVWGHPEVYIVILPAFGIYSEIIPTFARKRLFGHQSMVWATAGIAFLSFLVWVHHFFTMGNGALINSFFSISTMLIGVPTGVKLFNWLLTLYKGRITFESPMLFSLAFIPNFLLGGVTGVMLAMASADYQYHNTYFLVAHFHYTLVTGVVFACLAGLIFWYPKMMGYKLNEKLNKWAFWLFMIGFNVCFLPQFILGLDGMPRRLYTYMPSDGWWLLNFISTIGALMMAVGFLFLVASIIYSHIKSPREATGDNWDGLGRTLEWSTASAIPPKYNFAITPDWNDYDTFVDMKEHGRHFLDNHNYKDIHMPNNTHTGVFMGIFMLVGGFFLIFESIIPFLICVAGIFGTMIYQSFVQDHGYHIPASEVAENEARLREARIKEREAVGHES . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 1015 3003 . - 0 GCA_005502385.1_00499 GCA_005502385.1_00499_gene,GCA_005502385.1_00499_mRNA GCA_005502385.1_00499 putative quinol oxidase subunit 1 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MNFPWDELLVKGNWMITMAQIGAPFLVIGLIAVITYFKLWKYLYKEWFTSVDHKKIGLMYLICAVLMFVRGGIDALLLRTQLTIPDNTFLESNHYNEIFSTHGVIMIIFMAMPFVFGLWNVVVPLQIGARDVAFPVMNNISFWLFFVGMILFNLSFIVGGSPAAGWTNYAPLAGEFSPGPGVNYYLVAIQISGIGTLMTGINFFVTILRCKTPTMKFMQMPMFTVTTFITTLIVILAFPVFTVVLALMTADRVFGTHFFTVADGGMPMLWANFFWVWGHPEVYIVILPAFGIYSEIIPTFARKRLFGHQSMVWATAGIAFLSFLVWVHHFFTMGNGALINSFFSISTMLIGVPTGVKLFNWLLTLYKGRITFESPMLFSLAFIPNFLLGGVTGVMLAMASADYQYHNTYFLVAHFHYTLVTGVVFACLAGLIFWYPKMMGYKLNEKLNKWAFWLFMIGFNVCFLPQFILGLDGMPRRLYTYMPSDGWWLLNFISTIGALMMAVGFLFLVASIIYSHIKSPREATGDNWDGLGRTLEWSTASAIPPKYNFAITPDWNDYDTFVDMKEHGRHFLDNHNYKDIHMPNNTHTGVFMGIFMLVGGFFLIFESIIPFLICVAGIFGTMIYQSFVQDHGYHIPASEVAENEARLREARIKEREAVGHES persistent 662 qoxB cytochrome aa3 quinol oxidase subunit I 1.10.3.- GO:0004129,GO:0005507,GO:0005886,GO:0006119,GO:0015990,GO:0016020,GO:0016682,GO:0020037,GO:0022904 C,COG0843 WP_017175777.1 UPI0002FE3163 UniRef100_A0A4Q9WSW7,UniRef50_E0TW66,UniRef90_Q2FZK0 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 3003 4115 . - . GCA_005502385.1_00500_gene GCA_005502385.1_00500 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSKFKSLLLMFGTLILLSGCSNIEVFNAKGPVASSQKFLIIYSIIFMLVIVAVVLTMFAVFIFKYSYNKNDESGKMHHNSLIETIWFVVPILIVIALAIPTVKTLYDYEKPPESKEDPLVVYAVSAGYKWFFAYPEQKVETVNTLTIPKNRPVVFKLQSMDTMTSFWIPQLGGQKYAMTGMTMNWTLTADQAGTFRGRNSNFNGEGFSRQTFKVHSVDQKDFDAWVKDAKSKKTISQDEFDKQILPSTPNKELTFSGTHMAFVDPAADPEYIFYAYKRYNYTQKDPNFVAEKDLYKDVTDKPQKPARKVTVTNVNYPRHGMKPMILGNDDPYDSEFKDEETHNAKEMEKINKGAKDENASKADNDHGGEH . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 3003 4115 . - . GCA_005502385.1_00500_mRNA GCA_005502385.1_00500 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSKFKSLLLMFGTLILLSGCSNIEVFNAKGPVASSQKFLIIYSIIFMLVIVAVVLTMFAVFIFKYSYNKNDESGKMHHNSLIETIWFVVPILIVIALAIPTVKTLYDYEKPPESKEDPLVVYAVSAGYKWFFAYPEQKVETVNTLTIPKNRPVVFKLQSMDTMTSFWIPQLGGQKYAMTGMTMNWTLTADQAGTFRGRNSNFNGEGFSRQTFKVHSVDQKDFDAWVKDAKSKKTISQDEFDKQILPSTPNKELTFSGTHMAFVDPAADPEYIFYAYKRYNYTQKDPNFVAEKDLYKDVTDKPQKPARKVTVTNVNYPRHGMKPMILGNDDPYDSEFKDEETHNAKEMEKINKGAKDENASKADNDHGGEH . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 3003 4115 . - 0 GCA_005502385.1_00500 GCA_005502385.1_00500_gene,GCA_005502385.1_00500_mRNA GCA_005502385.1_00500 putative quinol oxidase subunit 2 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSKFKSLLLMFGTLILLSGCSNIEVFNAKGPVASSQKFLIIYSIIFMLVIVAVVLTMFAVFIFKYSYNKNDESGKMHHNSLIETIWFVVPILIVIALAIPTVKTLYDYEKPPESKEDPLVVYAVSAGYKWFFAYPEQKVETVNTLTIPKNRPVVFKLQSMDTMTSFWIPQLGGQKYAMTGMTMNWTLTADQAGTFRGRNSNFNGEGFSRQTFKVHSVDQKDFDAWVKDAKSKKTISQDEFDKQILPSTPNKELTFSGTHMAFVDPAADPEYIFYAYKRYNYTQKDPNFVAEKDLYKDVTDKPQKPARKVTVTNVNYPRHGMKPMILGNDDPYDSEFKDEETHNAKEMEKINKGAKDENASKADNDHGGEH persistent 370 qoxA cytochrome aa3 quinol oxidase subunit II 1.10.3.- GO:0004129,GO:0005507,GO:0005886,GO:0009055,GO:0009486,GO:0015078,GO:0015990,GO:0016020,GO:0016682,GO:0042773 C,COG1622 WP_048762314.1 UPI0006613380 UniRef100_UPI0006613380,UniRef50_Q2FZJ9,UniRef90_Q4L565 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 4413 4730 . - . GCA_005502385.1_00501_gene GCA_005502385.1_00501 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MNKLIQSLSALGVSATLVTPNLSAEATSNHTPQLKGVNDIVIEKGQDYNVLNGISAYDKEDGDLTHKITVDGHVDTSKVGTYKVRYNVIDSEGAEESSTRYIKVK . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 4413 4730 . - . GCA_005502385.1_00501_mRNA GCA_005502385.1_00501 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MNKLIQSLSALGVSATLVTPNLSAEATSNHTPQLKGVNDIVIEKGQDYNVLNGISAYDKEDGDLTHKITVDGHVDTSKVGTYKVRYNVIDSEGAEESSTRYIKVK . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 4413 4730 . - 0 GCA_005502385.1_00501 GCA_005502385.1_00501_gene,GCA_005502385.1_00501_mRNA GCA_005502385.1_00501 hypothetical protein GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MNKLIQSLSALGVSATLVTPNLSAEATSNHTPQLKGVNDIVIEKGQDYNVLNGISAYDKEDGDLTHKITVDGHVDTSKVGTYKVRYNVIDSEGAEESSTRYIKVK persistent 105 DUF5011 domain-containing protein WP_017175775.1 UPI0002DA01F4 UniRef100_A0A2A1MAE0,UniRef50_Q49WI5,UniRef90_A0A2A1MAE0 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 4999 6144 . + . GCA_005502385.1_00502_gene GCA_005502385.1_00502 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MLTEQEKGIVKETVPVLQERGTEITSYFYNRMFQQHPELKNMFNQTNQQKGFQSTALAQSVLAAAVNIEHLENILPVVKEIAYKHCALQVPPAGYDIVGENLIEAIKAVLGLEDSHPIIQTWKKAYQEIADVFIQVEKDIYSKMLWEGFQPFKIEKIDQLSSDIKSFTVVSDKYDLSQFTPGEYITVDVSSEKMPYRAKRHYSIVSGDNNHLTFAVKRDVSTDHEGEVSTILHDELKEGNDINLSAPVGPFGVVNQNQPQVFIGAGIGVTPLVSMFDKVAENGSHAQFIQVTGDVNDTPFTSHLKDISKRYDNAKYELYDRQAKGYLTKETLENYVNNDSEVYVCGSAKFIQSVIEVLKEIGVSQEHIHYETFVPKLSVSV . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 4999 6144 . + . GCA_005502385.1_00502_mRNA GCA_005502385.1_00502 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MLTEQEKGIVKETVPVLQERGTEITSYFYNRMFQQHPELKNMFNQTNQQKGFQSTALAQSVLAAAVNIEHLENILPVVKEIAYKHCALQVPPAGYDIVGENLIEAIKAVLGLEDSHPIIQTWKKAYQEIADVFIQVEKDIYSKMLWEGFQPFKIEKIDQLSSDIKSFTVVSDKYDLSQFTPGEYITVDVSSEKMPYRAKRHYSIVSGDNNHLTFAVKRDVSTDHEGEVSTILHDELKEGNDINLSAPVGPFGVVNQNQPQVFIGAGIGVTPLVSMFDKVAENGSHAQFIQVTGDVNDTPFTSHLKDISKRYDNAKYELYDRQAKGYLTKETLENYVNNDSEVYVCGSAKFIQSVIEVLKEIGVSQEHIHYETFVPKLSVSV . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 4999 6144 . + 0 GCA_005502385.1_00502 GCA_005502385.1_00502_gene,GCA_005502385.1_00502_mRNA GCA_005502385.1_00502 Flavohemoprotein GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MLTEQEKGIVKETVPVLQERGTEITSYFYNRMFQQHPELKNMFNQTNQQKGFQSTALAQSVLAAAVNIEHLENILPVVKEIAYKHCALQVPPAGYDIVGENLIEAIKAVLGLEDSHPIIQTWKKAYQEIADVFIQVEKDIYSKMLWEGFQPFKIEKIDQLSSDIKSFTVVSDKYDLSQFTPGEYITVDVSSEKMPYRAKRHYSIVSGDNNHLTFAVKRDVSTDHEGEVSTILHDELKEGNDINLSAPVGPFGVVNQNQPQVFIGAGIGVTPLVSMFDKVAENGSHAQFIQVTGDVNDTPFTSHLKDISKRYDNAKYELYDRQAKGYLTKETLENYVNNDSEVYVCGSAKFIQSVIEVLKEIGVSQEHIHYETFVPKLSVSV persistent 381 nitric oxide dioxygenase 1.14.12.17 WP_017175774.1 UPI0002D8136D UniRef100_A0A3S7GTI2,UniRef50_Q2G2P2,UniRef90_A0A3S7GTI2 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 6233 7090 . - . GCA_005502385.1_00503_gene GCA_005502385.1_00503 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MVAKILDGKHIAKDYRQGLQDQVETLKEKGYTPKLSVILVGNDGASQSYVNSKKKAAEKIGMISEIVHLSEDTSEEDVLKELDRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDGFHPSNIGKLYIDEQTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQANATVTILHSRTKDMHSHLKHADVIVSAVGKPGLVTKDDVKEGAVIVDVGNTPDENGKLKGDVEFEEVKEIAGAITPVPGGVGPLTITMVLNNTLLAEKMRRGIE . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 6233 7090 . - . GCA_005502385.1_00503_mRNA GCA_005502385.1_00503 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MVAKILDGKHIAKDYRQGLQDQVETLKEKGYTPKLSVILVGNDGASQSYVNSKKKAAEKIGMISEIVHLSEDTSEEDVLKELDRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDGFHPSNIGKLYIDEQTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQANATVTILHSRTKDMHSHLKHADVIVSAVGKPGLVTKDDVKEGAVIVDVGNTPDENGKLKGDVEFEEVKEIAGAITPVPGGVGPLTITMVLNNTLLAEKMRRGIE . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 6233 7090 . - 0 GCA_005502385.1_00503 GCA_005502385.1_00503_gene,GCA_005502385.1_00503_mRNA GCA_005502385.1_00503 Bifunctional protein FolD protein GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MVAKILDGKHIAKDYRQGLQDQVETLKEKGYTPKLSVILVGNDGASQSYVNSKKKAAEKIGMISEIVHLSEDTSEEDVLKELDRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDGFHPSNIGKLYIDEQTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQANATVTILHSRTKDMHSHLKHADVIVSAVGKPGLVTKDDVKEGAVIVDVGNTPDENGKLKGDVEFEEVKEIAGAITPVPGGVGPLTITMVLNNTLLAEKMRRGIE persistent 285 folD bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD GO:0000105,GO:0004477,GO:0004488,GO:0005829,GO:0006164,GO:0009086,GO:0035999 COG0190,H WP_017175773.1 UPI0002D967F1 UniRef100_A0A3S7GTI3,UniRef50_Q2FZJ6,UniRef90_Q2FZJ6 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 7301 7783 . + . GCA_005502385.1_00504_gene GCA_005502385.1_00504 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MKVAVIMGSSSDWKIMQESCAMLEQFEIPYEKKVVSAHRTPKLMFDFASEARTNGYDVIIAGAGGAAHLPGMVASMTTLPVIGVPIESKSLKGLDSLLSIVQMPGGIPVATTAIGKSGAKNAGILAARILSIGNDSVRKHLEQYEQSLVDKVGEMQDELQ . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 7301 7783 . + . GCA_005502385.1_00504_mRNA GCA_005502385.1_00504 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MKVAVIMGSSSDWKIMQESCAMLEQFEIPYEKKVVSAHRTPKLMFDFASEARTNGYDVIIAGAGGAAHLPGMVASMTTLPVIGVPIESKSLKGLDSLLSIVQMPGGIPVATTAIGKSGAKNAGILAARILSIGNDSVRKHLEQYEQSLVDKVGEMQDELQ . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 7301 7783 . + 0 GCA_005502385.1_00504 GCA_005502385.1_00504_gene,GCA_005502385.1_00504_mRNA GCA_005502385.1_00504 N5-carboxyaminoimidazole ribonucleotide mutase GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MKVAVIMGSSSDWKIMQESCAMLEQFEIPYEKKVVSAHRTPKLMFDFASEARTNGYDVIIAGAGGAAHLPGMVASMTTLPVIGVPIESKSLKGLDSLLSIVQMPGGIPVATTAIGKSGAKNAGILAARILSIGNDSVRKHLEQYEQSLVDKVGEMQDELQ persistent 160 purE N5-carboxyaminoimidazole ribonucleotide mutase COG0041,F WP_002448044.1 UPI00019FC885 UniRef100_A0A1K1YET7,UniRef50_P43849,UniRef90_A0A1K1YET7 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 7770 8894 . + . GCA_005502385.1_00505_gene GCA_005502385.1_00505 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MNFNRLKFGATIGIIGGGQLGKMMAQSAQKMGFNVACLDPNPDSPCKSVADVFITAEYDDEEALNKLGQQSDVITYEFENISAQQLKQLTQQFNIPQSYQAIELLQDRLTEKQTLESAGTKIVPYVSLKDEKDLNQAIETLSYPFIVKTRFGGYDGKGQILVKNDSNVEEAKVLVSKHECVAEKFLDLDREVSLTVTIGNQKQIAYFPLQENEHRNQILFKTIIPARCDKEQEARKEVDKIIEKVHFVGTFTVEFFIDKSNHLYVNEIAPRPHNSGHYTIEACDYSQFDTHILAVTGQDLPQEIEILKPAVMMNLLGRDLDLLEDKFGDHPEWHVHIYGKTERKSDRKMGHMTILTNNVNETENEMLKQFKGRE . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 7770 8894 . + . GCA_005502385.1_00505_mRNA GCA_005502385.1_00505 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MNFNRLKFGATIGIIGGGQLGKMMAQSAQKMGFNVACLDPNPDSPCKSVADVFITAEYDDEEALNKLGQQSDVITYEFENISAQQLKQLTQQFNIPQSYQAIELLQDRLTEKQTLESAGTKIVPYVSLKDEKDLNQAIETLSYPFIVKTRFGGYDGKGQILVKNDSNVEEAKVLVSKHECVAEKFLDLDREVSLTVTIGNQKQIAYFPLQENEHRNQILFKTIIPARCDKEQEARKEVDKIIEKVHFVGTFTVEFFIDKSNHLYVNEIAPRPHNSGHYTIEACDYSQFDTHILAVTGQDLPQEIEILKPAVMMNLLGRDLDLLEDKFGDHPEWHVHIYGKTERKSDRKMGHMTILTNNVNETENEMLKQFKGRE . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 7770 8894 . + 0 GCA_005502385.1_00505 GCA_005502385.1_00505_gene,GCA_005502385.1_00505_mRNA GCA_005502385.1_00505 N5-carboxyaminoimidazole ribonucleotide synthase GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MNFNRLKFGATIGIIGGGQLGKMMAQSAQKMGFNVACLDPNPDSPCKSVADVFITAEYDDEEALNKLGQQSDVITYEFENISAQQLKQLTQQFNIPQSYQAIELLQDRLTEKQTLESAGTKIVPYVSLKDEKDLNQAIETLSYPFIVKTRFGGYDGKGQILVKNDSNVEEAKVLVSKHECVAEKFLDLDREVSLTVTIGNQKQIAYFPLQENEHRNQILFKTIIPARCDKEQEARKEVDKIIEKVHFVGTFTVEFFIDKSNHLYVNEIAPRPHNSGHYTIEACDYSQFDTHILAVTGQDLPQEIEILKPAVMMNLLGRDLDLLEDKFGDHPEWHVHIYGKTERKSDRKMGHMTILTNNVNETENEMLKQFKGRE persistent 374 purK 5-(carboxyamino)imidazole ribonucleotide synthase 6.3.4.18 GO:0004638,GO:0005524,GO:0006189,GO:0046872 WP_017175772.1 UPI000301F719 UniRef100_A0A3S7GTI7,UniRef50_Q49WI9,UniRef90_A0A6N0I3K5 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 8898 9602 . + . GCA_005502385.1_00506_gene GCA_005502385.1_00506 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSLLYEGKAKRVFSTETVHQLRVEYKDEVTAGNGAKKDKMQGKGRLNNRITSIIFEYLNKHGLESHFIKQLSETEQLVKEVKIIPLEVVVRNIATGSITKRLGFEKGHVFDEPLVEFFYKNDDLNDPLITDDHVKLLHIANDEEIKALKDMAKNINKVLIQLMNEMDLRLVDFKVEFGKTENGDILLADEISPDTCRIWDKYSDTNFDKDVYRNDTGSLIDTYQTFLDKLEELK . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 8898 9602 . + . GCA_005502385.1_00506_mRNA GCA_005502385.1_00506 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSLLYEGKAKRVFSTETVHQLRVEYKDEVTAGNGAKKDKMQGKGRLNNRITSIIFEYLNKHGLESHFIKQLSETEQLVKEVKIIPLEVVVRNIATGSITKRLGFEKGHVFDEPLVEFFYKNDDLNDPLITDDHVKLLHIANDEEIKALKDMAKNINKVLIQLMNEMDLRLVDFKVEFGKTENGDILLADEISPDTCRIWDKYSDTNFDKDVYRNDTGSLIDTYQTFLDKLEELK . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 8898 9602 . + 0 GCA_005502385.1_00506 GCA_005502385.1_00506_gene,GCA_005502385.1_00506_mRNA GCA_005502385.1_00506 Phosphoribosylaminoimidazole-succinocarboxamide synthase GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSLLYEGKAKRVFSTETVHQLRVEYKDEVTAGNGAKKDKMQGKGRLNNRITSIIFEYLNKHGLESHFIKQLSETEQLVKEVKIIPLEVVVRNIATGSITKRLGFEKGHVFDEPLVEFFYKNDDLNDPLITDDHVKLLHIANDEEIKALKDMAKNINKVLIQLMNEMDLRLVDFKVEFGKTENGDILLADEISPDTCRIWDKYSDTNFDKDVYRNDTGSLIDTYQTFLDKLEELK persistent 234 purC phosphoribosylaminoimidazolesuccinocarboxamide synthase 6.3.2.6 GO:0004639,GO:0006164 WP_017175771.1 UPI0002DB3002 UniRef100_A0A3S7GT67,UniRef50_Q8Y6B9,UniRef90_A0A3S7GT67 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 9602 9862 . + . GCA_005502385.1_00507_gene GCA_005502385.1_00507 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MKTIELHITLQPQVLDTQGQALNRAVHDLGYKQVNDIRVGKVLYMTVDEATDEAVNNIITTLSEKLFANTVIEEYSYKIVDEKENA . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 9602 9862 . + . GCA_005502385.1_00507_mRNA GCA_005502385.1_00507 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MKTIELHITLQPQVLDTQGQALNRAVHDLGYKQVNDIRVGKVLYMTVDEATDEAVNNIITTLSEKLFANTVIEEYSYKIVDEKENA . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 9602 9862 . + 0 GCA_005502385.1_00507 GCA_005502385.1_00507_gene,GCA_005502385.1_00507_mRNA GCA_005502385.1_00507 Phosphoribosylformylglycinamidine synthase subunit PurS GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MKTIELHITLQPQVLDTQGQALNRAVHDLGYKQVNDIRVGKVLYMTVDEATDEAVNNIITTLSEKLFANTVIEEYSYKIVDEKENA persistent 86 purS phosphoribosylformylglycinamidine synthase subunit PurS 6.3.5.3 COG1828,F WP_002448160.1 UPI00019FC888 UniRef100_A0A4Q9WSY4,UniRef50_A0A239ZQS9,UniRef90_A0A0D6XMJ6 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 9864 10535 . + . GCA_005502385.1_00508_gene GCA_005502385.1_00508 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MKFAVLVFPGSNCDRDMYNAAIKTGAEAEYVDYRETSLKGFDGVLIPGGFSFGDYLRSGAMASVAPIISEVKRFASEGKPVLGVCNGFQILTEIGLLPGALLHNDSHLFISRNEKLKIVNNQTPFTNLYGENEIVVYPVAHGEGHYYCTDDMYNELVENNQIILTYEDNPNGSHEHIAGIVNKAGNVCGMMPHPERALETLLGTDSGVKLFEAMVNSWREQNV . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 9864 10535 . + . GCA_005502385.1_00508_mRNA GCA_005502385.1_00508 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MKFAVLVFPGSNCDRDMYNAAIKTGAEAEYVDYRETSLKGFDGVLIPGGFSFGDYLRSGAMASVAPIISEVKRFASEGKPVLGVCNGFQILTEIGLLPGALLHNDSHLFISRNEKLKIVNNQTPFTNLYGENEIVVYPVAHGEGHYYCTDDMYNELVENNQIILTYEDNPNGSHEHIAGIVNKAGNVCGMMPHPERALETLLGTDSGVKLFEAMVNSWREQNV . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 9864 10535 . + 0 GCA_005502385.1_00508 GCA_005502385.1_00508_gene,GCA_005502385.1_00508_mRNA GCA_005502385.1_00508 Phosphoribosylformylglycinamidine synthase subunit PurQ GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MKFAVLVFPGSNCDRDMYNAAIKTGAEAEYVDYRETSLKGFDGVLIPGGFSFGDYLRSGAMASVAPIISEVKRFASEGKPVLGVCNGFQILTEIGLLPGALLHNDSHLFISRNEKLKIVNNQTPFTNLYGENEIVVYPVAHGEGHYYCTDDMYNELVENNQIILTYEDNPNGSHEHIAGIVNKAGNVCGMMPHPERALETLLGTDSGVKLFEAMVNSWREQNV persistent 223 purQ phosphoribosylformylglycinamidine synthase I 6.3.5.3 GO:0004642,GO:0006189 WP_017175770.1 UPI0002F71364 UniRef100_A0A2A1MI84,UniRef50_P12041,UniRef90_A0A6N0I3M4 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 10528 12717 . + . GCA_005502385.1_00509_gene GCA_005502385.1_00509 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSKFIEPSIEEIKLEKLYQDMGLSDEEYNKVREILGREPNFTEVGIFSVMWSEHCSYKHSKPFLKQFPTTGEHVLMGPGEGAGVVDIGDNQAVVFKVESHNHPSAIEPYQGAATGVGGIIRDIVSIGARPINLLNSLRFGELSVKQNQRLLKGVVRGIGGYGNCIGIPTTAGEIEFDERYDGNPLVNAMCVGVIDHDMVQKGTAKGEGNSVIYVGLKTGRDGIHGATFASEELTEESESKRPSVQIGDPFVGKKLMEATLEAITFDELVGIQDMGAAGLTSSSSEMAAKGGSGLVLYLDQVPTREPGISPYEMMLSETQERMLLVVEKGTEQKFLDLFDKHELDSAVIGEVTDTDRFVLKYEDEVYADIPVDALADEAPVYILEGEEKEYNTSKNDYSEINVQDVFKKLLKHPTIASKHYLYEQYDQQVGANTIIKPGLQSSVVRVEGTNKAIASTIDGEARYVFNQPYEGGKMVVAEAYRNLIAVGATPLAMTDCLNYGSPEKKEIYQQLIDSTKGMAEACEVLKTPVVSGNVSLYNETRGTSIFPTPVVGMVGLIEDIQYLNDFHPETGHTLYLVGETRNDFGGSQIEKLLYSKVNHEYEEIDLGDEVAKGEAIKTSIRNGIASHVQTVGKGGLLITLAKISAYYNLGLEAKVELSDAQLFSETQGRYVVAVKEGQTLDVDGAIKIGELTDVDEFKVSNTTSTITEKVSDIKAIWEGAISECLTTVD . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 10528 12717 . + . GCA_005502385.1_00509_mRNA GCA_005502385.1_00509 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSKFIEPSIEEIKLEKLYQDMGLSDEEYNKVREILGREPNFTEVGIFSVMWSEHCSYKHSKPFLKQFPTTGEHVLMGPGEGAGVVDIGDNQAVVFKVESHNHPSAIEPYQGAATGVGGIIRDIVSIGARPINLLNSLRFGELSVKQNQRLLKGVVRGIGGYGNCIGIPTTAGEIEFDERYDGNPLVNAMCVGVIDHDMVQKGTAKGEGNSVIYVGLKTGRDGIHGATFASEELTEESESKRPSVQIGDPFVGKKLMEATLEAITFDELVGIQDMGAAGLTSSSSEMAAKGGSGLVLYLDQVPTREPGISPYEMMLSETQERMLLVVEKGTEQKFLDLFDKHELDSAVIGEVTDTDRFVLKYEDEVYADIPVDALADEAPVYILEGEEKEYNTSKNDYSEINVQDVFKKLLKHPTIASKHYLYEQYDQQVGANTIIKPGLQSSVVRVEGTNKAIASTIDGEARYVFNQPYEGGKMVVAEAYRNLIAVGATPLAMTDCLNYGSPEKKEIYQQLIDSTKGMAEACEVLKTPVVSGNVSLYNETRGTSIFPTPVVGMVGLIEDIQYLNDFHPETGHTLYLVGETRNDFGGSQIEKLLYSKVNHEYEEIDLGDEVAKGEAIKTSIRNGIASHVQTVGKGGLLITLAKISAYYNLGLEAKVELSDAQLFSETQGRYVVAVKEGQTLDVDGAIKIGELTDVDEFKVSNTTSTITEKVSDIKAIWEGAISECLTTVD . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 10528 12717 . + 0 GCA_005502385.1_00509 GCA_005502385.1_00509_gene,GCA_005502385.1_00509_mRNA GCA_005502385.1_00509 Phosphoribosylformylglycinamidine synthase subunit PurL GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSKFIEPSIEEIKLEKLYQDMGLSDEEYNKVREILGREPNFTEVGIFSVMWSEHCSYKHSKPFLKQFPTTGEHVLMGPGEGAGVVDIGDNQAVVFKVESHNHPSAIEPYQGAATGVGGIIRDIVSIGARPINLLNSLRFGELSVKQNQRLLKGVVRGIGGYGNCIGIPTTAGEIEFDERYDGNPLVNAMCVGVIDHDMVQKGTAKGEGNSVIYVGLKTGRDGIHGATFASEELTEESESKRPSVQIGDPFVGKKLMEATLEAITFDELVGIQDMGAAGLTSSSSEMAAKGGSGLVLYLDQVPTREPGISPYEMMLSETQERMLLVVEKGTEQKFLDLFDKHELDSAVIGEVTDTDRFVLKYEDEVYADIPVDALADEAPVYILEGEEKEYNTSKNDYSEINVQDVFKKLLKHPTIASKHYLYEQYDQQVGANTIIKPGLQSSVVRVEGTNKAIASTIDGEARYVFNQPYEGGKMVVAEAYRNLIAVGATPLAMTDCLNYGSPEKKEIYQQLIDSTKGMAEACEVLKTPVVSGNVSLYNETRGTSIFPTPVVGMVGLIEDIQYLNDFHPETGHTLYLVGETRNDFGGSQIEKLLYSKVNHEYEEIDLGDEVAKGEAIKTSIRNGIASHVQTVGKGGLLITLAKISAYYNLGLEAKVELSDAQLFSETQGRYVVAVKEGQTLDVDGAIKIGELTDVDEFKVSNTTSTITEKVSDIKAIWEGAISECLTTVD persistent 729 purL phosphoribosylformylglycinamidine synthase subunit PurL 6.3.5.3 GO:0000287,GO:0004642,GO:0005524,GO:0005737,GO:0006189 COG0046,F WP_017175769.1 UPI0002E52A72 UniRef100_A0A3S7GSY1,UniRef50_Q2FZJ0,UniRef90_Q4L578 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 12696 14180 . + . GCA_005502385.1_00510_gene GCA_005502385.1_00510 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MFNYSGLNEECGVFGIWNHSEAAQLTYMGLHSLQHRGQEGAGIVVSDEDTLKGERGLGLLTEAIKEPQLNKLKDGNHAIGHVRYATSGNKGIENIQPFLYHFYDMSVAICHNGNLINAQTLRQYLEKHGAIFHSSSDTEVIMHLIRRSKAPTFEEALKESLRQIKGGFTFAILTKDALYGAVDPNAIRPLVVGKMQDGTYILASETCAIDVLGAEYVQDIHAGEYVVINHNGIEVKSYTSHTNTAISAMEYIYFARPDSTIAGKNVHAVRKVSGKKLAQESPAQADMVIGVPNSSLSAASGYAEEIQLPYEMGLVKNQYVARTFIQPTQELREQGVRVKLSAVKDIVEGKDIILVDDSIVRGTTSKRIVKMLKDAGANKIHVRIASPEFMFPSFYGIDVSTTAELISASKSPEEICEYIGADSLAYLSVEGLIESIGLDFDAPYSGLCVESFTGDYPAGLFDYEENYLNNLSTRQKEYIDNHKHYFDREGNIHV . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 12696 14180 . + . GCA_005502385.1_00510_mRNA GCA_005502385.1_00510 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MFNYSGLNEECGVFGIWNHSEAAQLTYMGLHSLQHRGQEGAGIVVSDEDTLKGERGLGLLTEAIKEPQLNKLKDGNHAIGHVRYATSGNKGIENIQPFLYHFYDMSVAICHNGNLINAQTLRQYLEKHGAIFHSSSDTEVIMHLIRRSKAPTFEEALKESLRQIKGGFTFAILTKDALYGAVDPNAIRPLVVGKMQDGTYILASETCAIDVLGAEYVQDIHAGEYVVINHNGIEVKSYTSHTNTAISAMEYIYFARPDSTIAGKNVHAVRKVSGKKLAQESPAQADMVIGVPNSSLSAASGYAEEIQLPYEMGLVKNQYVARTFIQPTQELREQGVRVKLSAVKDIVEGKDIILVDDSIVRGTTSKRIVKMLKDAGANKIHVRIASPEFMFPSFYGIDVSTTAELISASKSPEEICEYIGADSLAYLSVEGLIESIGLDFDAPYSGLCVESFTGDYPAGLFDYEENYLNNLSTRQKEYIDNHKHYFDREGNIHV . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 12696 14180 . + 0 GCA_005502385.1_00510 GCA_005502385.1_00510_gene,GCA_005502385.1_00510_mRNA GCA_005502385.1_00510 Amidophosphoribosyltransferase GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MFNYSGLNEECGVFGIWNHSEAAQLTYMGLHSLQHRGQEGAGIVVSDEDTLKGERGLGLLTEAIKEPQLNKLKDGNHAIGHVRYATSGNKGIENIQPFLYHFYDMSVAICHNGNLINAQTLRQYLEKHGAIFHSSSDTEVIMHLIRRSKAPTFEEALKESLRQIKGGFTFAILTKDALYGAVDPNAIRPLVVGKMQDGTYILASETCAIDVLGAEYVQDIHAGEYVVINHNGIEVKSYTSHTNTAISAMEYIYFARPDSTIAGKNVHAVRKVSGKKLAQESPAQADMVIGVPNSSLSAASGYAEEIQLPYEMGLVKNQYVARTFIQPTQELREQGVRVKLSAVKDIVEGKDIILVDDSIVRGTTSKRIVKMLKDAGANKIHVRIASPEFMFPSFYGIDVSTTAELISASKSPEEICEYIGADSLAYLSVEGLIESIGLDFDAPYSGLCVESFTGDYPAGLFDYEENYLNNLSTRQKEYIDNHKHYFDREGNIHV persistent 494 purF amidophosphoribosyltransferase 2.4.2.14 GO:0004044,GO:0009113 COG0034,F WP_017175768.1 UPI0003074110 UniRef100_A0A3S7GXR1,UniRef50_Q5HQA0,UniRef90_A0A2A1K525 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 14173 15201 . + . GCA_005502385.1_00511_gene GCA_005502385.1_00511 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSKAYEQSGVDIHAGYEAVERMSSHVQRTMRKEVLGGLGGFGATFDLSQLNMKAPVLVSGTDGVGTKLKLAIDNNKHDTIGIDAVAMCVNDILTTGAEPLYFLDYIATNKVVPEVIEQIVKGVSDGCEATHTALIGGETAEMGEMYHEGEYDLAGFAVGAVEKDEYIDGSEVEEGQIIIGLASNGIHSNGYSLVRKLIQESGINLNDSFDGSTYLDTFLAPTQLYVKPILTLKEKVKIKGMNHITGGGFYENIPRGLPNGLAAKIDTQSFPTPKVFEWLQQQADIETSEMYNVFNMGIGYTVIVNKEDVSKALDILKEQDIAAYQIGEIVKSNDAPIYLEGV . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 14173 15201 . + . GCA_005502385.1_00511_mRNA GCA_005502385.1_00511 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSKAYEQSGVDIHAGYEAVERMSSHVQRTMRKEVLGGLGGFGATFDLSQLNMKAPVLVSGTDGVGTKLKLAIDNNKHDTIGIDAVAMCVNDILTTGAEPLYFLDYIATNKVVPEVIEQIVKGVSDGCEATHTALIGGETAEMGEMYHEGEYDLAGFAVGAVEKDEYIDGSEVEEGQIIIGLASNGIHSNGYSLVRKLIQESGINLNDSFDGSTYLDTFLAPTQLYVKPILTLKEKVKIKGMNHITGGGFYENIPRGLPNGLAAKIDTQSFPTPKVFEWLQQQADIETSEMYNVFNMGIGYTVIVNKEDVSKALDILKEQDIAAYQIGEIVKSNDAPIYLEGV . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 14173 15201 . + 0 GCA_005502385.1_00511 GCA_005502385.1_00511_gene,GCA_005502385.1_00511_mRNA GCA_005502385.1_00511 Phosphoribosylformylglycinamidine cyclo-ligase GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSKAYEQSGVDIHAGYEAVERMSSHVQRTMRKEVLGGLGGFGATFDLSQLNMKAPVLVSGTDGVGTKLKLAIDNNKHDTIGIDAVAMCVNDILTTGAEPLYFLDYIATNKVVPEVIEQIVKGVSDGCEATHTALIGGETAEMGEMYHEGEYDLAGFAVGAVEKDEYIDGSEVEEGQIIIGLASNGIHSNGYSLVRKLIQESGINLNDSFDGSTYLDTFLAPTQLYVKPILTLKEKVKIKGMNHITGGGFYENIPRGLPNGLAAKIDTQSFPTPKVFEWLQQQADIETSEMYNVFNMGIGYTVIVNKEDVSKALDILKEQDIAAYQIGEIVKSNDAPIYLEGV persistent 342 Phosphoribosylformylglycinamidine cyclo-ligase WP_017175767.1 UPI0002E01019 UniRef100_A0A4V2KXH3,UniRef50_Q8Y6C3,UniRef90_A0A6N0I3K7 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 15204 15770 . + . GCA_005502385.1_00512_gene GCA_005502385.1_00512 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MTKVAIFASGSGSNFENIVSKVDKGHLNNIEITSLYTDHHDAYCIERAKQLKVMVHINEPKDFENKAEYEQKLIQLLHSEEVEWIILAGYMRLVGPDLLNAYEGKILNIHPSLLPKYKGKDAIGQAFNSGDKETGSTVHYVDSGMDTGEIIEQRKCDIKPDDTKEALEERVKQLEYELYPSVIAKVIK . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 15204 15770 . + . GCA_005502385.1_00512_mRNA GCA_005502385.1_00512 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MTKVAIFASGSGSNFENIVSKVDKGHLNNIEITSLYTDHHDAYCIERAKQLKVMVHINEPKDFENKAEYEQKLIQLLHSEEVEWIILAGYMRLVGPDLLNAYEGKILNIHPSLLPKYKGKDAIGQAFNSGDKETGSTVHYVDSGMDTGEIIEQRKCDIKPDDTKEALEERVKQLEYELYPSVIAKVIK . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 15204 15770 . + 0 GCA_005502385.1_00512 GCA_005502385.1_00512_gene,GCA_005502385.1_00512_mRNA GCA_005502385.1_00512 Phosphoribosylglycinamide formyltransferase GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MTKVAIFASGSGSNFENIVSKVDKGHLNNIEITSLYTDHHDAYCIERAKQLKVMVHINEPKDFENKAEYEQKLIQLLHSEEVEWIILAGYMRLVGPDLLNAYEGKILNIHPSLLPKYKGKDAIGQAFNSGDKETGSTVHYVDSGMDTGEIIEQRKCDIKPDDTKEALEERVKQLEYELYPSVIAKVIK persistent 188 purN phosphoribosylglycinamide formyltransferase 2.1.2.2 GO:0004644,GO:0006189 WP_017175766.1 UPI00031F4624 UniRef100_A0A8X8GPZ6,UniRef50_Q5HQ98,UniRef90_A0A6N0I3S3 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 15786 17264 . + . GCA_005502385.1_00513_gene GCA_005502385.1_00513 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MKKAIISVSNKSGVVEFAKSLTQLDYELYSTGGTKRALEEANVTVKSVSELTQFPEIMDGRVKTLHPAVHGGILADRNKPEHLEQLSEQHIDLIDMVVVNLYPFQQTVANPDVTEDDAIENIDIGGPTMLRAAAKNFKHVTTIVHPSDYNEVIQRIKEHRLDESYRKSLMIKVFEHTNEYDHAIVSFFKGDSEELRYGENPQQSARFVRTSNSKHTIAGAKQLHGKALSFNNIKDADSALALVKKFKEPAAVAVKHMNPCGVGIGTDIETAFKHAYDADNQSIFGGIIALNRTVTKDLAETLHSIFLEVVIAPKFDKEALDILTQKKNIRLLEIDMTIDNREEEFVSVSGGYLVQDKDNYEVSKEEMKVVTDVEPTDAQWEAMLLGWKVIPSVKSNAIILSNNKQTVGIGAGQMNRVGAAKIALERAIEINDNVVMISDGFFPMDDTVELAAKHGIKAIIQPGGSIKDQDSIDMANKHGIAMVTTGMRHFKH . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 15786 17264 . + . GCA_005502385.1_00513_mRNA GCA_005502385.1_00513 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MKKAIISVSNKSGVVEFAKSLTQLDYELYSTGGTKRALEEANVTVKSVSELTQFPEIMDGRVKTLHPAVHGGILADRNKPEHLEQLSEQHIDLIDMVVVNLYPFQQTVANPDVTEDDAIENIDIGGPTMLRAAAKNFKHVTTIVHPSDYNEVIQRIKEHRLDESYRKSLMIKVFEHTNEYDHAIVSFFKGDSEELRYGENPQQSARFVRTSNSKHTIAGAKQLHGKALSFNNIKDADSALALVKKFKEPAAVAVKHMNPCGVGIGTDIETAFKHAYDADNQSIFGGIIALNRTVTKDLAETLHSIFLEVVIAPKFDKEALDILTQKKNIRLLEIDMTIDNREEEFVSVSGGYLVQDKDNYEVSKEEMKVVTDVEPTDAQWEAMLLGWKVIPSVKSNAIILSNNKQTVGIGAGQMNRVGAAKIALERAIEINDNVVMISDGFFPMDDTVELAAKHGIKAIIQPGGSIKDQDSIDMANKHGIAMVTTGMRHFKH . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 15786 17264 . + 0 GCA_005502385.1_00513 GCA_005502385.1_00513_gene,GCA_005502385.1_00513_mRNA GCA_005502385.1_00513 Bifunctional purine biosynthesis protein PurH GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MKKAIISVSNKSGVVEFAKSLTQLDYELYSTGGTKRALEEANVTVKSVSELTQFPEIMDGRVKTLHPAVHGGILADRNKPEHLEQLSEQHIDLIDMVVVNLYPFQQTVANPDVTEDDAIENIDIGGPTMLRAAAKNFKHVTTIVHPSDYNEVIQRIKEHRLDESYRKSLMIKVFEHTNEYDHAIVSFFKGDSEELRYGENPQQSARFVRTSNSKHTIAGAKQLHGKALSFNNIKDADSALALVKKFKEPAAVAVKHMNPCGVGIGTDIETAFKHAYDADNQSIFGGIIALNRTVTKDLAETLHSIFLEVVIAPKFDKEALDILTQKKNIRLLEIDMTIDNREEEFVSVSGGYLVQDKDNYEVSKEEMKVVTDVEPTDAQWEAMLLGWKVIPSVKSNAIILSNNKQTVGIGAGQMNRVGAAKIALERAIEINDNVVMISDGFFPMDDTVELAAKHGIKAIIQPGGSIKDQDSIDMANKHGIAMVTTGMRHFKH persistent 492 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2.1.2.3,3.5.4.10 GO:0003824,GO:0003937,GO:0004643,GO:0005829,GO:0006164,GO:0006189 COG0138,F WP_017175765.1 UPI0002D67AC7 UniRef100_A0A4Q9WVI7,UniRef50_P67543,UniRef90_Q4L582 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 17300 18538 . + . GCA_005502385.1_00514_gene GCA_005502385.1_00514 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MNVLVIGAGGREHALVSKLHQSPLIEKLYAIPGNDAMTHLAEIHTEIAETDHKAILQFVHQHHIEWVIIGPEQPLIDGLSNKLRDNHVKVFGPNKEAAQIEGSKSFAKRVMEKYDIPTADYKEIDNKTEALNYVNDCELPIVVKKDGLAAGKGVIIANTRDEAIEAVEVLYPQEDGKVVFEQFLEGEEFSLMTFINGDYAVPFDCIAQDHKRAYDNDEGPNTGGMGAYCPVPHISNDVLERTNKDIAQPIARALKEEGYDYFGLLYIGAILTKEGPKVIEFNARFGDPEAQVLLSRLESDLMAQIVALDRKEPIRFQWINDYVVGVMLASKGYPGSYDKGAEVSGFELNNHYFVSGLKKENDTFLTSGGRVVLAIGKGKTIQQAQKDAYGNVEKIKSDQLFYRKDIGNKALK . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 17300 18538 . + . GCA_005502385.1_00514_mRNA GCA_005502385.1_00514 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MNVLVIGAGGREHALVSKLHQSPLIEKLYAIPGNDAMTHLAEIHTEIAETDHKAILQFVHQHHIEWVIIGPEQPLIDGLSNKLRDNHVKVFGPNKEAAQIEGSKSFAKRVMEKYDIPTADYKEIDNKTEALNYVNDCELPIVVKKDGLAAGKGVIIANTRDEAIEAVEVLYPQEDGKVVFEQFLEGEEFSLMTFINGDYAVPFDCIAQDHKRAYDNDEGPNTGGMGAYCPVPHISNDVLERTNKDIAQPIARALKEEGYDYFGLLYIGAILTKEGPKVIEFNARFGDPEAQVLLSRLESDLMAQIVALDRKEPIRFQWINDYVVGVMLASKGYPGSYDKGAEVSGFELNNHYFVSGLKKENDTFLTSGGRVVLAIGKGKTIQQAQKDAYGNVEKIKSDQLFYRKDIGNKALK . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 17300 18538 . + 0 GCA_005502385.1_00514 GCA_005502385.1_00514_gene,GCA_005502385.1_00514_mRNA GCA_005502385.1_00514 Phosphoribosylamine--glycine ligase GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MNVLVIGAGGREHALVSKLHQSPLIEKLYAIPGNDAMTHLAEIHTEIAETDHKAILQFVHQHHIEWVIIGPEQPLIDGLSNKLRDNHVKVFGPNKEAAQIEGSKSFAKRVMEKYDIPTADYKEIDNKTEALNYVNDCELPIVVKKDGLAAGKGVIIANTRDEAIEAVEVLYPQEDGKVVFEQFLEGEEFSLMTFINGDYAVPFDCIAQDHKRAYDNDEGPNTGGMGAYCPVPHISNDVLERTNKDIAQPIARALKEEGYDYFGLLYIGAILTKEGPKVIEFNARFGDPEAQVLLSRLESDLMAQIVALDRKEPIRFQWINDYVVGVMLASKGYPGSYDKGAEVSGFELNNHYFVSGLKKENDTFLTSGGRVVLAIGKGKTIQQAQKDAYGNVEKIKSDQLFYRKDIGNKALK persistent 412 Phosphoribosylamine--glycine ligase WP_017175764.1 UPI00030C20CB UniRef100_A0A3S7GTF2,UniRef50_P65895,UniRef90_A0A3S7GTF2 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 18688 19497 . - . GCA_005502385.1_00515_gene GCA_005502385.1_00515 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MFERWKKRHTLVDDVNIITKLILGVLLFIFIIFVHNFDYMIYITLLMFIFLLSFNGTAFKVIAAFLSATILFALLSSLFMILYGDGTHMLFEWGIIHISTESIVRGLHLSLRTITVSMFGVLIALTSQIVMIFYSLMQHLKVKPKIAYAFMAAIRMVPLIFTSFIQLRRSLKMRYQMIDASNYRGFKRIKHLLIPVLSQNIRRAHQLSVAMESKGFKDGPRTYYYKAPFSYKDILFIGMTIALLIIAFYLSQYFPITGIKDARVSEMLE . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 18688 19497 . - . GCA_005502385.1_00515_mRNA GCA_005502385.1_00515 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MFERWKKRHTLVDDVNIITKLILGVLLFIFIIFVHNFDYMIYITLLMFIFLLSFNGTAFKVIAAFLSATILFALLSSLFMILYGDGTHMLFEWGIIHISTESIVRGLHLSLRTITVSMFGVLIALTSQIVMIFYSLMQHLKVKPKIAYAFMAAIRMVPLIFTSFIQLRRSLKMRYQMIDASNYRGFKRIKHLLIPVLSQNIRRAHQLSVAMESKGFKDGPRTYYYKAPFSYKDILFIGMTIALLIIAFYLSQYFPITGIKDARVSEMLE . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 18688 19497 . - 0 GCA_005502385.1_00515 GCA_005502385.1_00515_gene,GCA_005502385.1_00515_mRNA GCA_005502385.1_00515 Energy-coupling factor transporter transmembrane protein EcfT GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MFERWKKRHTLVDDVNIITKLILGVLLFIFIIFVHNFDYMIYITLLMFIFLLSFNGTAFKVIAAFLSATILFALLSSLFMILYGDGTHMLFEWGIIHISTESIVRGLHLSLRTITVSMFGVLIALTSQIVMIFYSLMQHLKVKPKIAYAFMAAIRMVPLIFTSFIQLRRSLKMRYQMIDASNYRGFKRIKHLLIPVLSQNIRRAHQLSVAMESKGFKDGPRTYYYKAPFSYKDILFIGMTIALLIIAFYLSQYFPITGIKDARVSEMLE persistent 269 ecfT Energy-coupling factor transporter transmembrane protein EcfT WP_002448247.1 UPI00019FC890 UniRef100_A0A6N0I3U0,UniRef50_S2XR66,UniRef90_A0A6N0I3U0 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 19490 20893 . - . GCA_005502385.1_00516_gene GCA_005502385.1_00516 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MLKVKNLRLKYPNGDRKIFDNLNIEIKDKEKVLLLGPSGSGKSTLLNVLSGIVPNLIELPMKYDELDIDPNSGVIFQDPDTQFCMPKVYEELAFVLENQQVPREDMDEQIKKALASVDLDVDNSTFVNNLSGGMKQKLAIVETILQKADTLFLDEPTAMLDVQATADLWQRLIQLWTDQTVLIVEHKVEHIWHHVDRVILMNYDGEIIADNTPEYILKHCESLLTEFGVWHPHAWDYAPIRTDLTPQTSKTLFKFQNGQIIRSKNTLFEVSELNIHPGEWITITGKNGAGKTTLLESMMQLVKYNGTMFYENRLLKKIKDAAQNMYLVYQNPELQFITNSVYDEINIHYNHLDKAKSKEETEHLLKLLHLEKVKHHHPFEISTGQKRRLSVATALSSKAEIILLDEPTFGLDSHNTFQLIKLFEERVEQGQSIVMVTHDPEIIHRYPTRRLVVENHKLLEMAGESNV . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 19490 20893 . - . GCA_005502385.1_00516_mRNA GCA_005502385.1_00516 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MLKVKNLRLKYPNGDRKIFDNLNIEIKDKEKVLLLGPSGSGKSTLLNVLSGIVPNLIELPMKYDELDIDPNSGVIFQDPDTQFCMPKVYEELAFVLENQQVPREDMDEQIKKALASVDLDVDNSTFVNNLSGGMKQKLAIVETILQKADTLFLDEPTAMLDVQATADLWQRLIQLWTDQTVLIVEHKVEHIWHHVDRVILMNYDGEIIADNTPEYILKHCESLLTEFGVWHPHAWDYAPIRTDLTPQTSKTLFKFQNGQIIRSKNTLFEVSELNIHPGEWITITGKNGAGKTTLLESMMQLVKYNGTMFYENRLLKKIKDAAQNMYLVYQNPELQFITNSVYDEINIHYNHLDKAKSKEETEHLLKLLHLEKVKHHHPFEISTGQKRRLSVATALSSKAEIILLDEPTFGLDSHNTFQLIKLFEERVEQGQSIVMVTHDPEIIHRYPTRRLVVENHKLLEMAGESNV . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 19490 20893 . - 0 GCA_005502385.1_00516 GCA_005502385.1_00516_gene,GCA_005502385.1_00516_mRNA GCA_005502385.1_00516 Putative HMP/thiamine import ATP-binding protein YkoD GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MLKVKNLRLKYPNGDRKIFDNLNIEIKDKEKVLLLGPSGSGKSTLLNVLSGIVPNLIELPMKYDELDIDPNSGVIFQDPDTQFCMPKVYEELAFVLENQQVPREDMDEQIKKALASVDLDVDNSTFVNNLSGGMKQKLAIVETILQKADTLFLDEPTAMLDVQATADLWQRLIQLWTDQTVLIVEHKVEHIWHHVDRVILMNYDGEIIADNTPEYILKHCESLLTEFGVWHPHAWDYAPIRTDLTPQTSKTLFKFQNGQIIRSKNTLFEVSELNIHPGEWITITGKNGAGKTTLLESMMQLVKYNGTMFYENRLLKKIKDAAQNMYLVYQNPELQFITNSVYDEINIHYNHLDKAKSKEETEHLLKLLHLEKVKHHHPFEISTGQKRRLSVATALSSKAEIILLDEPTFGLDSHNTFQLIKLFEERVEQGQSIVMVTHDPEIIHRYPTRRLVVENHKLLEMAGESNV persistent 467 ccmA heme ABC exporter ATP-binding protein CcmA 7.6.2.5 GO:0015439,GO:0015886,GO:0017004,GO:0022857,GO:0043190 WP_049420036.1 UPI00066B6B37 UniRef100_UPI00066B6B37,UniRef50_S2XKC2,UniRef90_A0A6N0I3R6 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 20906 21481 . - . GCA_005502385.1_00517_gene GCA_005502385.1_00517 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSKGLKLSEILVTVLIAVIFAIIYNLWWLPYNLAQVAGIHLEQLTYGIWFMAAIVAYLIIPKPGIALIAEFAAGAGETIVMGKFDIPTIVYAILQGLACEVVFAIFKYKSRSLMVAMLAGLVTALVSFPVDYFYGYLNEVAGWNLLLFIIFRAISGIVLSGILSYLIVKALDQTGVTKLFRPASQKDYDNL . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 20906 21481 . - . GCA_005502385.1_00517_mRNA GCA_005502385.1_00517 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSKGLKLSEILVTVLIAVIFAIIYNLWWLPYNLAQVAGIHLEQLTYGIWFMAAIVAYLIIPKPGIALIAEFAAGAGETIVMGKFDIPTIVYAILQGLACEVVFAIFKYKSRSLMVAMLAGLVTALVSFPVDYFYGYLNEVAGWNLLLFIIFRAISGIVLSGILSYLIVKALDQTGVTKLFRPASQKDYDNL . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 20906 21481 . - 0 GCA_005502385.1_00517 GCA_005502385.1_00517_gene,GCA_005502385.1_00517_mRNA GCA_005502385.1_00517 Putative HMP/thiamine permease protein YkoE GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSKGLKLSEILVTVLIAVIFAIIYNLWWLPYNLAQVAGIHLEQLTYGIWFMAAIVAYLIIPKPGIALIAEFAAGAGETIVMGKFDIPTIVYAILQGLACEVVFAIFKYKSRSLMVAMLAGLVTALVSFPVDYFYGYLNEVAGWNLLLFIIFRAISGIVLSGILSYLIVKALDQTGVTKLFRPASQKDYDNL persistent 191 ykoE Thiamine ABC transporter permease COG4721,H WP_002448226.1 UPI00019FC892 UniRef100_A0A1L8Y6K8,UniRef50_Q2FZI2,UniRef90_A0A2A1K8Z9 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 21574 21675 . - . GCA_005502385.1_00518_gene GCA_005502385.1_00518 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 21574 21675 . - . GCA_005502385.1_00518_mRNA GCA_005502385.1_00518 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 . . . . . . . GCA_005502385.1|SCOV01000019.1 Infernal:001001 misc_RNA 21574 21675 71.3 - . GCA_005502385.1_00518 GCA_005502385.1_00518_gene,GCA_005502385.1_00518_mRNA GCA_005502385.1_00518 TPP GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 21941 22060 . - . GCA_005502385.1_00519_gene GCA_005502385.1_00519 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MTHEDAKKAKEYEEKLKEQKEEKTDDIEQTKQDVQNTLD . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 21941 22060 . - . GCA_005502385.1_00519_mRNA GCA_005502385.1_00519 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MTHEDAKKAKEYEEKLKEQKEEKTDDIEQTKQDVQNTLD . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 21941 22060 . - 0 GCA_005502385.1_00519 GCA_005502385.1_00519_gene,GCA_005502385.1_00519_mRNA GCA_005502385.1_00519 hypothetical protein GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MTHEDAKKAKEYEEKLKEQKEEKTDDIEQTKQDVQNTLD persistent 39 graF glycopeptide resistance-associated protein GraF WP_002448238.1 UPI00019FC893 UniRef100_A0A4Q9WZT4,UniRef50_A0A4Q9WZT4,UniRef90_A0A4Q9WZT4 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 22213 23508 . + . GCA_005502385.1_00520_gene GCA_005502385.1_00520 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSFVKKHAEIIYSYLIGIVSLFTGLIILINLPLIHKLKNKDKIDLKIHNIWDFLNAFFSEIIRVMSRFIGNFPVVSAVIIILFGILVILIGYTLFRTTKYDYDISIFFLVIGILYFLITITLMTQVYGFWAIIFIIPFVIHTGYIVYKDELYQENRKVHYLWIIISYGISYLITQLSLYGKIDANEIEPIDILSVNTFFIIMWLLAQAAIWNFLFLRRALPLTKEELGEEEPELSRTQKGNVSTQSKVHFKQLQDKTSEYAHKTRRSVDLDKIRSKRDKFKSKFKNIVDIEEDDIPKWMRRPKWIKPAYVEIFCGFILFLFTFIEFNNRNALFVSGEWKLSQTQYVIEWITLLILLFIIIIYIATTFTHFLRGKFYYLQLFMISILFFKLLTEFINIMIHGLLLSIFITPTLIIMLIPVIIAFSLQLKEKP . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 22213 23508 . + . GCA_005502385.1_00520_mRNA GCA_005502385.1_00520 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSFVKKHAEIIYSYLIGIVSLFTGLIILINLPLIHKLKNKDKIDLKIHNIWDFLNAFFSEIIRVMSRFIGNFPVVSAVIIILFGILVILIGYTLFRTTKYDYDISIFFLVIGILYFLITITLMTQVYGFWAIIFIIPFVIHTGYIVYKDELYQENRKVHYLWIIISYGISYLITQLSLYGKIDANEIEPIDILSVNTFFIIMWLLAQAAIWNFLFLRRALPLTKEELGEEEPELSRTQKGNVSTQSKVHFKQLQDKTSEYAHKTRRSVDLDKIRSKRDKFKSKFKNIVDIEEDDIPKWMRRPKWIKPAYVEIFCGFILFLFTFIEFNNRNALFVSGEWKLSQTQYVIEWITLLILLFIIIIYIATTFTHFLRGKFYYLQLFMISILFFKLLTEFINIMIHGLLLSIFITPTLIIMLIPVIIAFSLQLKEKP . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 22213 23508 . + 0 GCA_005502385.1_00520 GCA_005502385.1_00520_gene,GCA_005502385.1_00520_mRNA GCA_005502385.1_00520 hypothetical protein GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSFVKKHAEIIYSYLIGIVSLFTGLIILINLPLIHKLKNKDKIDLKIHNIWDFLNAFFSEIIRVMSRFIGNFPVVSAVIIILFGILVILIGYTLFRTTKYDYDISIFFLVIGILYFLITITLMTQVYGFWAIIFIIPFVIHTGYIVYKDELYQENRKVHYLWIIISYGISYLITQLSLYGKIDANEIEPIDILSVNTFFIIMWLLAQAAIWNFLFLRRALPLTKEELGEEEPELSRTQKGNVSTQSKVHFKQLQDKTSEYAHKTRRSVDLDKIRSKRDKFKSKFKNIVDIEEDDIPKWMRRPKWIKPAYVEIFCGFILFLFTFIEFNNRNALFVSGEWKLSQTQYVIEWITLLILLFIIIIYIATTFTHFLRGKFYYLQLFMISILFFKLLTEFINIMIHGLLLSIFITPTLIIMLIPVIIAFSLQLKEKP persistent 431 auxA lipoteichoic acid stability factor AuxA WP_049420037.1 UPI00066B33FB UniRef100_UPI00066B33FB,UniRef50_A0A1E9A5G9,UniRef90_A0A3S7GT34 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 22966 23093 . - . GCA_005502385.1_00521_gene GCA_005502385.1_00521 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 22966 23093 . - . GCA_005502385.1_00521_mRNA GCA_005502385.1_00521 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 . . . . . . . GCA_005502385.1|SCOV01000019.1 Infernal:001001 misc_RNA 22966 23093 95.0 - . GCA_005502385.1_00521 GCA_005502385.1_00521_gene,GCA_005502385.1_00521_mRNA GCA_005502385.1_00521 sau-59 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 23662 24834 . + . GCA_005502385.1_00522_gene GCA_005502385.1_00522 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MKIATLNKGKETKYLNQYPLVEEEDIFQHDHLKEGDLFNIVTENNQYIATAYVGRQHKGIGWVITYSQEEDINITFFENLFKKALEEREYYYNIEGTNAFRLFNAEGDGVGGLTIDNYNGHLLIQWYSKGIYKFRYIIIEAIKKVFKFESVFEKMRFKDTEYTGGHVLGKTPEFPIVIEENFTFYNVDLNDGLMTGIFLDQKEVRKKLRDYFAENRSILNLFSYTGAFSVVASKNAKVTTSVDLANRSRTLTEENFGLNGVDPKSQYIYVMDTFDFYNYAARHGKQYDTIVIDPPSFARNKKKTFSVQKNYDDLINGALEVLAPDGTLLLCTNSSAFSLKAFKNVIKKTLEQANVEYEIEEVMGLPKDFKTHPHYKPSKYLKAVFINIKH . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 23662 24834 . + . GCA_005502385.1_00522_mRNA GCA_005502385.1_00522 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MKIATLNKGKETKYLNQYPLVEEEDIFQHDHLKEGDLFNIVTENNQYIATAYVGRQHKGIGWVITYSQEEDINITFFENLFKKALEEREYYYNIEGTNAFRLFNAEGDGVGGLTIDNYNGHLLIQWYSKGIYKFRYIIIEAIKKVFKFESVFEKMRFKDTEYTGGHVLGKTPEFPIVIEENFTFYNVDLNDGLMTGIFLDQKEVRKKLRDYFAENRSILNLFSYTGAFSVVASKNAKVTTSVDLANRSRTLTEENFGLNGVDPKSQYIYVMDTFDFYNYAARHGKQYDTIVIDPPSFARNKKKTFSVQKNYDDLINGALEVLAPDGTLLLCTNSSAFSLKAFKNVIKKTLEQANVEYEIEEVMGLPKDFKTHPHYKPSKYLKAVFINIKH . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 23662 24834 . + 0 GCA_005502385.1_00522 GCA_005502385.1_00522_gene,GCA_005502385.1_00522_mRNA GCA_005502385.1_00522 Ribosomal RNA large subunit methyltransferase I GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MKIATLNKGKETKYLNQYPLVEEEDIFQHDHLKEGDLFNIVTENNQYIATAYVGRQHKGIGWVITYSQEEDINITFFENLFKKALEEREYYYNIEGTNAFRLFNAEGDGVGGLTIDNYNGHLLIQWYSKGIYKFRYIIIEAIKKVFKFESVFEKMRFKDTEYTGGHVLGKTPEFPIVIEENFTFYNVDLNDGLMTGIFLDQKEVRKKLRDYFAENRSILNLFSYTGAFSVVASKNAKVTTSVDLANRSRTLTEENFGLNGVDPKSQYIYVMDTFDFYNYAARHGKQYDTIVIDPPSFARNKKKTFSVQKNYDDLINGALEVLAPDGTLLLCTNSSAFSLKAFKNVIKKTLEQANVEYEIEEVMGLPKDFKTHPHYKPSKYLKAVFINIKH persistent 390 Class I SAM-dependent rRNA methyltransferase WP_061544577.1 UPI000778DCDF UniRef100_UPI000778DCDF,UniRef50_Q2FZH8,UniRef90_A0A3S7GSX3 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 24900 25442 . + . GCA_005502385.1_00523_gene GCA_005502385.1_00523 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSIINKITNGVTDKVGKKVLDIEEINEKDILPKNEEEIAQRREKAKAVVKKKSLLSSGMSVVPIPGLDFGVDIKLMKDIIEDINKIYGLDQKQVNSLGEDVKERILSAAAIQGSSMIGEKVTSGALKLIIRDVAKRTAAKQTKWFPIVGQAVSASISYYFMNKLGQDHIEKCEKVLRDII . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 24900 25442 . + . GCA_005502385.1_00523_mRNA GCA_005502385.1_00523 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSIINKITNGVTDKVGKKVLDIEEINEKDILPKNEEEIAQRREKAKAVVKKKSLLSSGMSVVPIPGLDFGVDIKLMKDIIEDINKIYGLDQKQVNSLGEDVKERILSAAAIQGSSMIGEKVTSGALKLIIRDVAKRTAAKQTKWFPIVGQAVSASISYYFMNKLGQDHIEKCEKVLRDII . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 24900 25442 . + 0 GCA_005502385.1_00523 GCA_005502385.1_00523_gene,GCA_005502385.1_00523_mRNA GCA_005502385.1_00523 hypothetical protein GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSIINKITNGVTDKVGKKVLDIEEINEKDILPKNEEEIAQRREKAKAVVKKKSLLSSGMSVVPIPGLDFGVDIKLMKDIIEDINKIYGLDQKQVNSLGEDVKERILSAAAIQGSSMIGEKVTSGALKLIIRDVAKRTAAKQTKWFPIVGQAVSASISYYFMNKLGQDHIEKCEKVLRDII persistent 180 DUF697 domain-containing protein WP_049420039.1 UPI00066D570B UniRef100_UPI00066D570B,UniRef50_A0AAE5M2R9,UniRef90_A0A4Q9WTN9 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 25715 25981 . + . GCA_005502385.1_00524_gene GCA_005502385.1_00524 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MEQKSYVIVDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLKSIMGVMSLGVGKDAEITIYADGSDEQDAIQAISEVLSKEGLTE . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 25715 25981 . + . GCA_005502385.1_00524_mRNA GCA_005502385.1_00524 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MEQKSYVIVDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLKSIMGVMSLGVGKDAEITIYADGSDEQDAIQAISEVLSKEGLTE . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 25715 25981 . + 0 GCA_005502385.1_00524 GCA_005502385.1_00524_gene,GCA_005502385.1_00524_mRNA GCA_005502385.1_00524 Phosphocarrier protein HPr GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MEQKSYVIVDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLKSIMGVMSLGVGKDAEITIYADGSDEQDAIQAISEVLSKEGLTE persistent 88 ptsH phosphocarrier protein HPr GO:0005737,GO:0009401 COG1925,TG WP_002448249.1 UPI00019FC948 UniRef100_A0A1L8Y6M8,UniRef50_Q9F166,UniRef90_P23534 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 25984 27699 . + . GCA_005502385.1_00525_gene GCA_005502385.1_00525 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSKLIKGIAASDGVAIAKAYLLVEPDLSFTNEKITDTDAEIKKFRNALEASKIELTKIRNNAEKSLGADKAAIFDAHLLVLDDPELIQPIEDKIANEKVNAPEALNEVTTQFITIFESMDNEYMRERAADIRDVSKRVLAHLLGVELPNPSMIDESVVIIGNDLTPSDTAQLNKEFVQGFVTNIGGRTSHSAIMSRSLEIAAVVGTKSITHEVKQGDMVIVDGITGDVIIDPTEDELIAYQNKRERFFEDKKELQKLRDAETVTVDGEHAELAANIGTPDDLYGVMENGAEGIGLYRTEFLYMGRDQMPTEDEQFEAYKKVLETMKDKRVVVRTLDIGGDKELPYLNLPKEMNPFLGYRAIRLCLDQQDIFRTQLRALLRASAYGKLNIMFPMVATIKEFRDAKAILLEEKDKLTSEGQEVADDIEVGIMVEIPSTAALADIFAKEVDFFSIGTNDLIQYTMAADRMSERVSYLYQPYNPAILRLVKQVIEASHKEGKWTGMCGEMAGDETAIPLLLGLGLDEFSMSATSILKARRQINGLSKNEMAELANRAINCATQDEVKELVHRISK . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 25984 27699 . + . GCA_005502385.1_00525_mRNA GCA_005502385.1_00525 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSKLIKGIAASDGVAIAKAYLLVEPDLSFTNEKITDTDAEIKKFRNALEASKIELTKIRNNAEKSLGADKAAIFDAHLLVLDDPELIQPIEDKIANEKVNAPEALNEVTTQFITIFESMDNEYMRERAADIRDVSKRVLAHLLGVELPNPSMIDESVVIIGNDLTPSDTAQLNKEFVQGFVTNIGGRTSHSAIMSRSLEIAAVVGTKSITHEVKQGDMVIVDGITGDVIIDPTEDELIAYQNKRERFFEDKKELQKLRDAETVTVDGEHAELAANIGTPDDLYGVMENGAEGIGLYRTEFLYMGRDQMPTEDEQFEAYKKVLETMKDKRVVVRTLDIGGDKELPYLNLPKEMNPFLGYRAIRLCLDQQDIFRTQLRALLRASAYGKLNIMFPMVATIKEFRDAKAILLEEKDKLTSEGQEVADDIEVGIMVEIPSTAALADIFAKEVDFFSIGTNDLIQYTMAADRMSERVSYLYQPYNPAILRLVKQVIEASHKEGKWTGMCGEMAGDETAIPLLLGLGLDEFSMSATSILKARRQINGLSKNEMAELANRAINCATQDEVKELVHRISK . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 25984 27699 . + 0 GCA_005502385.1_00525 GCA_005502385.1_00525_gene,GCA_005502385.1_00525_mRNA GCA_005502385.1_00525 Phosphoenolpyruvate-protein phosphotransferase GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSKLIKGIAASDGVAIAKAYLLVEPDLSFTNEKITDTDAEIKKFRNALEASKIELTKIRNNAEKSLGADKAAIFDAHLLVLDDPELIQPIEDKIANEKVNAPEALNEVTTQFITIFESMDNEYMRERAADIRDVSKRVLAHLLGVELPNPSMIDESVVIIGNDLTPSDTAQLNKEFVQGFVTNIGGRTSHSAIMSRSLEIAAVVGTKSITHEVKQGDMVIVDGITGDVIIDPTEDELIAYQNKRERFFEDKKELQKLRDAETVTVDGEHAELAANIGTPDDLYGVMENGAEGIGLYRTEFLYMGRDQMPTEDEQFEAYKKVLETMKDKRVVVRTLDIGGDKELPYLNLPKEMNPFLGYRAIRLCLDQQDIFRTQLRALLRASAYGKLNIMFPMVATIKEFRDAKAILLEEKDKLTSEGQEVADDIEVGIMVEIPSTAALADIFAKEVDFFSIGTNDLIQYTMAADRMSERVSYLYQPYNPAILRLVKQVIEASHKEGKWTGMCGEMAGDETAIPLLLGLGLDEFSMSATSILKARRQINGLSKNEMAELANRAINCATQDEVKELVHRISK persistent 571 ptsA Phosphoenolpyruvate-protein phosphotransferase COG1080,G WP_049416172.1 UPI00066C1F74 UniRef100_UPI00066C1F74,UniRef50_P23533,UniRef90_A0A1K2A0V1 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 27752 27985 . - . GCA_005502385.1_00526_gene GCA_005502385.1_00526 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSKIIIYTQDDCPPCNFIKNYLTEHHINFIEKNIKHPSYRNEMLEYDAFSTPFILLNEEPMYHVDLEKINRIFDIQL . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 27752 27985 . - . GCA_005502385.1_00526_mRNA GCA_005502385.1_00526 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSKIIIYTQDDCPPCNFIKNYLTEHHINFIEKNIKHPSYRNEMLEYDAFSTPFILLNEEPMYHVDLEKINRIFDIQL . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 27752 27985 . - 0 GCA_005502385.1_00526 GCA_005502385.1_00526_gene,GCA_005502385.1_00526_mRNA GCA_005502385.1_00526 hypothetical protein """""" GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MSKIIIYTQDDCPPCNFIKNYLTEHHINFIEKNIKHPSYRNEMLEYDAFSTPFILLNEEPMYHVDLEKINRIFDIQL persistent 77 NrdH-redoxin WP_049382531.1 UPI00066A3342 UniRef100_UPI00066A3342,UniRef50_Q2FZH4,UniRef90_A0A4Q9WU22 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 28181 29527 . + . GCA_005502385.1_00527_gene GCA_005502385.1_00527 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MNSVEISRFLTGMTLGVHIIFATIGVGMPLMFAIAEFLGIKKKDPKYIALAKRWSKGYTITVAVGVVTGTIIGLQLSLVWPTFMKMGGHVIALPLFMETFAFFFEAIFLSIYLYTWNRFKNQWIHFLISLPVIIGGSFSAFFITSVNSFMNTPAGFEMKKGKMVNVQPFEAMFNSSFLVRAFHVVATAGMTMAFILAAIAAFKLLKNKYSEDAPYHKKALKMTMILGFIQTLLSMLAGDLSAKFLHKVQPEKLAAYEWHFDTRSKADLVFFGVLNENTQEVSGAIKIPGLLSFLADNNINTKVKGLNEFPKNDLPPLIVHYFFDLMVAMGIFCFIVSGIFILALLIKKLRPIITKKVMLYAVLLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVSQAATQAGGITLVTILFGLLYFVLLFTSAYVLLRMFRNKPAREDIDKVIGGQE . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 28181 29527 . + . GCA_005502385.1_00527_mRNA GCA_005502385.1_00527 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MNSVEISRFLTGMTLGVHIIFATIGVGMPLMFAIAEFLGIKKKDPKYIALAKRWSKGYTITVAVGVVTGTIIGLQLSLVWPTFMKMGGHVIALPLFMETFAFFFEAIFLSIYLYTWNRFKNQWIHFLISLPVIIGGSFSAFFITSVNSFMNTPAGFEMKKGKMVNVQPFEAMFNSSFLVRAFHVVATAGMTMAFILAAIAAFKLLKNKYSEDAPYHKKALKMTMILGFIQTLLSMLAGDLSAKFLHKVQPEKLAAYEWHFDTRSKADLVFFGVLNENTQEVSGAIKIPGLLSFLADNNINTKVKGLNEFPKNDLPPLIVHYFFDLMVAMGIFCFIVSGIFILALLIKKLRPIITKKVMLYAVLLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVSQAATQAGGITLVTILFGLLYFVLLFTSAYVLLRMFRNKPAREDIDKVIGGQE . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 28181 29527 . + 0 GCA_005502385.1_00527 GCA_005502385.1_00527_gene,GCA_005502385.1_00527_mRNA GCA_005502385.1_00527 Putative cytochrome bd menaquinol oxidase subunit I GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MNSVEISRFLTGMTLGVHIIFATIGVGMPLMFAIAEFLGIKKKDPKYIALAKRWSKGYTITVAVGVVTGTIIGLQLSLVWPTFMKMGGHVIALPLFMETFAFFFEAIFLSIYLYTWNRFKNQWIHFLISLPVIIGGSFSAFFITSVNSFMNTPAGFEMKKGKMVNVQPFEAMFNSSFLVRAFHVVATAGMTMAFILAAIAAFKLLKNKYSEDAPYHKKALKMTMILGFIQTLLSMLAGDLSAKFLHKVQPEKLAAYEWHFDTRSKADLVFFGVLNENTQEVSGAIKIPGLLSFLADNNINTKVKGLNEFPKNDLPPLIVHYFFDLMVAMGIFCFIVSGIFILALLIKKLRPIITKKVMLYAVLLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVSQAATQAGGITLVTILFGLLYFVLLFTSAYVLLRMFRNKPAREDIDKVIGGQE persistent 448 Cytochrome ubiquinol oxidase subunit I 7.1.1.7 WP_049420040.1 UPI00066D7A2D UniRef100_UPI00066D7A2D,UniRef50_A0A2S5D5L8,UniRef90_A0A974KX44 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 29527 30543 . + . GCA_005502385.1_00528_gene GCA_005502385.1_00528 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MDYTGIGITVLWTFLFCYIIVASIDFGAGFLTLHTKLTGEEKKINHLIERYLNPVWEVTNVFFVFFFVGFVGFFPDSALYLGTVLLVPGSIALILISIRSSFYAFEHYGQDNKLPWIFLYGITGLLIPAALATVLTISEGGYINEQGNHFDLDWVQLLLSPFAWSVVFLAIVSVLYISSGFLTYYASKAKDKVAYKFMRQWFMFWGPPMIIISLFVFLSLRIQNSNHFYNAITHYWWMFAISFIFFLIAGILNMIKKYHGLAFIMVILQMAFAFYGYGMSKLPYILYPYIKISDSGVNSSMGLALTIVFILGLLLLLPSLILLLRLFVFDKQYVEGKK . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 29527 30543 . + . GCA_005502385.1_00528_mRNA GCA_005502385.1_00528 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MDYTGIGITVLWTFLFCYIIVASIDFGAGFLTLHTKLTGEEKKINHLIERYLNPVWEVTNVFFVFFFVGFVGFFPDSALYLGTVLLVPGSIALILISIRSSFYAFEHYGQDNKLPWIFLYGITGLLIPAALATVLTISEGGYINEQGNHFDLDWVQLLLSPFAWSVVFLAIVSVLYISSGFLTYYASKAKDKVAYKFMRQWFMFWGPPMIIISLFVFLSLRIQNSNHFYNAITHYWWMFAISFIFFLIAGILNMIKKYHGLAFIMVILQMAFAFYGYGMSKLPYILYPYIKISDSGVNSSMGLALTIVFILGLLLLLPSLILLLRLFVFDKQYVEGKK . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 29527 30543 . + 0 GCA_005502385.1_00528 GCA_005502385.1_00528_gene,GCA_005502385.1_00528_mRNA GCA_005502385.1_00528 Putative cytochrome bd menaquinol oxidase subunit II GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MDYTGIGITVLWTFLFCYIIVASIDFGAGFLTLHTKLTGEEKKINHLIERYLNPVWEVTNVFFVFFFVGFVGFFPDSALYLGTVLLVPGSIALILISIRSSFYAFEHYGQDNKLPWIFLYGITGLLIPAALATVLTISEGGYINEQGNHFDLDWVQLLLSPFAWSVVFLAIVSVLYISSGFLTYYASKAKDKVAYKFMRQWFMFWGPPMIIISLFVFLSLRIQNSNHFYNAITHYWWMFAISFIFFLIAGILNMIKKYHGLAFIMVILQMAFAFYGYGMSKLPYILYPYIKISDSGVNSSMGLALTIVFILGLLLLLPSLILLLRLFVFDKQYVEGKK persistent 338 Cytochrome D Ubiquinol oxidase subunit II 7.1.1.7 WP_017175752.1 UPI00031D35D7 UniRef100_A0A1L8Y6K6,UniRef50_A0AAJ5RM05,UniRef90_A0A1L8Y6K6 . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka gene 30667 31326 . + . GCA_005502385.1_00529_gene GCA_005502385.1_00529 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MEKEYVVIGLGRFGGSIVRELNALDMDVMAIDRDEARVNEYSEIATHAVVADTTDEAVMKSLGIRNFDHVIVAIGENIQSSTLTTLILKELGVKKVTAKAQNDYHAKILNKIGADTVVHPERDMGRRIAHNVASASVLDYLELADEHSLVELKVSEKLTGQTIRDLDIRAQFGINIIAIKRGREIIVSPDPNMNIEIGDIMIMIGHDNDLNRFEKKIVR . . . . . . . GCA_005502385.1|SCOV01000019.1 prokka mRNA 30667 31326 . + . GCA_005502385.1_00529_mRNA GCA_005502385.1_00529 GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MEKEYVVIGLGRFGGSIVRELNALDMDVMAIDRDEARVNEYSEIATHAVVADTTDEAVMKSLGIRNFDHVIVAIGENIQSSTLTTLILKELGVKKVTAKAQNDYHAKILNKIGADTVVHPERDMGRRIAHNVASASVLDYLELADEHSLVELKVSEKLTGQTIRDLDIRAQFGINIIAIKRGREIIVSPDPNMNIEIGDIMIMIGHDNDLNRFEKKIVR . . . . . . . GCA_005502385.1|SCOV01000019.1 Prodigal:002006 CDS 30667 31326 . + 0 GCA_005502385.1_00529 GCA_005502385.1_00529_gene,GCA_005502385.1_00529_mRNA GCA_005502385.1_00529 Ktr system potassium uptake protein A GCA_005502385.1 SCOV01000019.1 GCA_005502385.1|SCOV01000019.1 GCA_005502385.1_SCOV01000019.1 MEKEYVVIGLGRFGGSIVRELNALDMDVMAIDRDEARVNEYSEIATHAVVADTTDEAVMKSLGIRNFDHVIVAIGENIQSSTLTTLILKELGVKKVTAKAQNDYHAKILNKIGADTVVHPERDMGRRIAHNVASASVLDYLELADEHSLVELKVSEKLTGQTIRDLDIRAQFGINIIAIKRGREIIVSPDPNMNIEIGDIMIMIGHDNDLNRFEKKIVR persistent 219 trkA TrkA family potassium uptake protein WP_002448135.1 UPI00019FC94D UniRef100_A0A1L8Y6L1,UniRef50_O32080,UniRef90_A0A1L8Y6L1 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 40 113 . + . GCA_005502385.1_00902_gene GCA_005502385.1_00902 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 40 113 . + . GCA_005502385.1_00902_mRNA GCA_005502385.1_00902 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 . . . . . . . GCA_005502385.1|SCOV01000020.1 Aragorn:001002 tRNA 40 113 . + . GCA_005502385.1_00902 GCA_005502385.1_00902_gene,GCA_005502385.1_00902_mRNA GCA_005502385.1_00902 tRNA-Glu(ttc) GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 120 195 . + . GCA_005502385.1_00903_gene GCA_005502385.1_00903 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 120 195 . + . GCA_005502385.1_00903_mRNA GCA_005502385.1_00903 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 . . . . . . . GCA_005502385.1|SCOV01000020.1 Aragorn:001002 tRNA 120 195 . + . GCA_005502385.1_00903 GCA_005502385.1_00903_gene,GCA_005502385.1_00903_mRNA GCA_005502385.1_00903 tRNA-Val(tac) GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 206 289 . + . GCA_005502385.1_00904_gene GCA_005502385.1_00904 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 206 289 . + . GCA_005502385.1_00904_mRNA GCA_005502385.1_00904 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 . . . . . . . GCA_005502385.1|SCOV01000020.1 Aragorn:001002 tRNA 206 289 . + . GCA_005502385.1_00904 GCA_005502385.1_00904_gene,GCA_005502385.1_00904_mRNA GCA_005502385.1_00904 tRNA-Tyr(gta) GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 296 370 . + . GCA_005502385.1_00905_gene GCA_005502385.1_00905 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 296 370 . + . GCA_005502385.1_00905_mRNA GCA_005502385.1_00905 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 . . . . . . . GCA_005502385.1|SCOV01000020.1 Aragorn:001002 tRNA 296 370 . + . GCA_005502385.1_00905 GCA_005502385.1_00905_gene,GCA_005502385.1_00905_mRNA GCA_005502385.1_00905 tRNA-Gln(ttg) GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 374 447 . + . GCA_005502385.1_00906_gene GCA_005502385.1_00906 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 374 447 . + . GCA_005502385.1_00906_mRNA GCA_005502385.1_00906 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 . . . . . . . GCA_005502385.1|SCOV01000020.1 Aragorn:001002 tRNA 374 447 . + . GCA_005502385.1_00906 GCA_005502385.1_00906_gene,GCA_005502385.1_00906_mRNA GCA_005502385.1_00906 tRNA-Lys(ttt) GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 599 1405 . + . GCA_005502385.1_00907_gene GCA_005502385.1_00907 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MDFSNFFNNLSTLKIITSILDILIVWYVLYLLITVFKGTKAIQLLKGILFIVIGQQVSKLLNLTATSKLFDIVIQWGVLALIVIFQPEIRRALEQLGRGSLFKRYTNTYSHDEEKLIQSVSKAVQYMAKRRIGALIVFEKETGLQDYIETGISMNSAISQELLINVFIPNTPLHDGAMIIQNTKIASAACYLPLSDSNKISKSLGTRHRAAVGISEVSDSFTVVVSEETGSISVTFDGKLRRDVSDEVFEELLAEHWFGTRAQKKGVK . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 599 1405 . + . GCA_005502385.1_00907_mRNA GCA_005502385.1_00907 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MDFSNFFNNLSTLKIITSILDILIVWYVLYLLITVFKGTKAIQLLKGILFIVIGQQVSKLLNLTATSKLFDIVIQWGVLALIVIFQPEIRRALEQLGRGSLFKRYTNTYSHDEEKLIQSVSKAVQYMAKRRIGALIVFEKETGLQDYIETGISMNSAISQELLINVFIPNTPLHDGAMIIQNTKIASAACYLPLSDSNKISKSLGTRHRAAVGISEVSDSFTVVVSEETGSISVTFDGKLRRDVSDEVFEELLAEHWFGTRAQKKGVK . . . . . . . GCA_005502385.1|SCOV01000020.1 Prodigal:002006 CDS 599 1405 . + 0 GCA_005502385.1_00907 GCA_005502385.1_00907_gene,GCA_005502385.1_00907_mRNA GCA_005502385.1_00907 Cyclic di-AMP synthase CdaA GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MDFSNFFNNLSTLKIITSILDILIVWYVLYLLITVFKGTKAIQLLKGILFIVIGQQVSKLLNLTATSKLFDIVIQWGVLALIVIFQPEIRRALEQLGRGSLFKRYTNTYSHDEEKLIQSVSKAVQYMAKRRIGALIVFEKETGLQDYIETGISMNSAISQELLINVFIPNTPLHDGAMIIQNTKIASAACYLPLSDSNKISKSLGTRHRAAVGISEVSDSFTVVVSEETGSISVTFDGKLRRDVSDEVFEELLAEHWFGTRAQKKGVK persistent 268 cdaA diadenylate cyclase CdaA 2.7.7.85 GO:0004016,GO:0006171 COG1642,T WP_017176078.1 UPI0002DA8A54 UniRef100_A0A2A1M6F3,UniRef50_A0A223KXB4,UniRef90_A0A2A1M6F3 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 1407 2339 . + . GCA_005502385.1_00908_gene GCA_005502385.1_00908 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MLESKWGLRFFALILAIFFYLSVNNVFGNIFNNDNLAQNSSKTIEDVPVEILYNTKNLHVTKSPDTVDVTISGPQSKLLKIESSDDIKVTVNLSNAKSGNYKEDYIVKGLSNDISYNVKPKHAYITLEDKDTKTMHVQPDISQNNVDSNYKVSETSLNKDTVQVTGGKKQLDKIAYLKATFKNATNISENTTDVAEITAFDKQLNKLNVQIKPNNIKMSVKLEPYSKKVKIKTVKKGSLPDDESLDSIKLNENEVEIYGNKDDLKDINDIEADVNLDDITESTDKTLQLKIPKQVKKSEFNEVTAHVNLK . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 1407 2339 . + . GCA_005502385.1_00908_mRNA GCA_005502385.1_00908 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MLESKWGLRFFALILAIFFYLSVNNVFGNIFNNDNLAQNSSKTIEDVPVEILYNTKNLHVTKSPDTVDVTISGPQSKLLKIESSDDIKVTVNLSNAKSGNYKEDYIVKGLSNDISYNVKPKHAYITLEDKDTKTMHVQPDISQNNVDSNYKVSETSLNKDTVQVTGGKKQLDKIAYLKATFKNATNISENTTDVAEITAFDKQLNKLNVQIKPNNIKMSVKLEPYSKKVKIKTVKKGSLPDDESLDSIKLNENEVEIYGNKDDLKDINDIEADVNLDDITESTDKTLQLKIPKQVKKSEFNEVTAHVNLK . . . . . . . GCA_005502385.1|SCOV01000020.1 Prodigal:002006 CDS 1407 2339 . + 0 GCA_005502385.1_00908 GCA_005502385.1_00908_gene,GCA_005502385.1_00908_mRNA GCA_005502385.1_00908 CdaA regulatory protein CdaR GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MLESKWGLRFFALILAIFFYLSVNNVFGNIFNNDNLAQNSSKTIEDVPVEILYNTKNLHVTKSPDTVDVTISGPQSKLLKIESSDDIKVTVNLSNAKSGNYKEDYIVKGLSNDISYNVKPKHAYITLEDKDTKTMHVQPDISQNNVDSNYKVSETSLNKDTVQVTGGKKQLDKIAYLKATFKNATNISENTTDVAEITAFDKQLNKLNVQIKPNNIKMSVKLEPYSKKVKIKTVKKGSLPDDESLDSIKLNENEVEIYGNKDDLKDINDIEADVNLDDITESTDKTLQLKIPKQVKKSEFNEVTAHVNLK persistent 310 YbbR-like domain-containing protein WP_017176079.1 UPI0003046E5D UniRef100_A0A4Q9WSG4,UniRef50_A0A2T4S925,UniRef90_A0AAE5JLM4 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 2368 3720 . + . GCA_005502385.1_00909_gene GCA_005502385.1_00909 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MGKYFGTDGVRGVANKELTPELAFKLGRYGGYVLAHNEGEKHPRVLVGRDTRVSGEMLESALIAGLASIGAEVMRLGVISTPGVAYLTREMGAQLGVMISASHNPVADNGIKFFGADGFKLSDKQEEEIEQLLDQEQPDLPRPAGKDIMHFSDYYEGAQKYLSYLKSTIDINLDGLKITLDGANGSTSSLAPFLFGDLEATTVTIGCNPDGYNINDECGSTHPEHLAEKVVETESDFGLAFDGDGDRLIAVDEKGNIIDGDQIMFIIGQEMHKNHELNNNMIVSTVMSNLGFYKALETEDIQSNKTKVGDRYVVEEMRRGHYNLGGEQSGHIVMMDYNTTGDGLLTGVQLAAIIKSSGKTLSELAAQMKKYPQSLINVKVTDKHHVSENEDVKAVMNEVENEMNGEGRILVRPSGTEPLVRVMVEAATNEDAERYAQTIADKVKEKMGLN . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 2368 3720 . + . GCA_005502385.1_00909_mRNA GCA_005502385.1_00909 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MGKYFGTDGVRGVANKELTPELAFKLGRYGGYVLAHNEGEKHPRVLVGRDTRVSGEMLESALIAGLASIGAEVMRLGVISTPGVAYLTREMGAQLGVMISASHNPVADNGIKFFGADGFKLSDKQEEEIEQLLDQEQPDLPRPAGKDIMHFSDYYEGAQKYLSYLKSTIDINLDGLKITLDGANGSTSSLAPFLFGDLEATTVTIGCNPDGYNINDECGSTHPEHLAEKVVETESDFGLAFDGDGDRLIAVDEKGNIIDGDQIMFIIGQEMHKNHELNNNMIVSTVMSNLGFYKALETEDIQSNKTKVGDRYVVEEMRRGHYNLGGEQSGHIVMMDYNTTGDGLLTGVQLAAIIKSSGKTLSELAAQMKKYPQSLINVKVTDKHHVSENEDVKAVMNEVENEMNGEGRILVRPSGTEPLVRVMVEAATNEDAERYAQTIADKVKEKMGLN . . . . . . . GCA_005502385.1|SCOV01000020.1 Prodigal:002006 CDS 2368 3720 . + 0 GCA_005502385.1_00909 GCA_005502385.1_00909_gene,GCA_005502385.1_00909_mRNA GCA_005502385.1_00909 Phosphoglucosamine mutase GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MGKYFGTDGVRGVANKELTPELAFKLGRYGGYVLAHNEGEKHPRVLVGRDTRVSGEMLESALIAGLASIGAEVMRLGVISTPGVAYLTREMGAQLGVMISASHNPVADNGIKFFGADGFKLSDKQEEEIEQLLDQEQPDLPRPAGKDIMHFSDYYEGAQKYLSYLKSTIDINLDGLKITLDGANGSTSSLAPFLFGDLEATTVTIGCNPDGYNINDECGSTHPEHLAEKVVETESDFGLAFDGDGDRLIAVDEKGNIIDGDQIMFIIGQEMHKNHELNNNMIVSTVMSNLGFYKALETEDIQSNKTKVGDRYVVEEMRRGHYNLGGEQSGHIVMMDYNTTGDGLLTGVQLAAIIKSSGKTLSELAAQMKKYPQSLINVKVTDKHHVSENEDVKAVMNEVENEMNGEGRILVRPSGTEPLVRVMVEAATNEDAERYAQTIADKVKEKMGLN persistent 450 glmM phosphoglucosamine mutase 5.4.2.10 GO:0000287,GO:0005975,GO:0008966,GO:0009252 WP_049434880.1 UPI00066A300D UniRef100_UPI00066A300D,UniRef50_P0C0V7,UniRef90_A0A6B8SPG9 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 3931 4141 . + . GCA_005502385.1_00910_gene GCA_005502385.1_00910 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 3931 4141 . + . GCA_005502385.1_00910_mRNA GCA_005502385.1_00910 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 . . . . . . . GCA_005502385.1|SCOV01000020.1 Infernal:001001 misc_RNA 3931 4141 110.6 + . GCA_005502385.1_00910 GCA_005502385.1_00910_gene,GCA_005502385.1_00910_mRNA GCA_005502385.1_00910 glmS GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 4261 6066 . + . GCA_005502385.1_00911_gene GCA_005502385.1_00911 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MCGIVGYIGFDNAKELLLSGLEKLEYRGYDSAGIAVVNDEGTTVFKEKGRIAELRKVADSNDIDGHIGIGHTRWATHGVPSHINSHPHQSNNGRFTLVHNGVIENYEELKSEYLSDVTFKSETDTEVIVQLVEYFSNKGLETEEAFTKAVSLLDGSYALGMLDSEDEDTIYVAKNKSPLLVGIGDDFNVIASDALAMIKVTNQYKEIHDHEIVIVKKESVTIKDKDGNIQDRPTYTAQIDASDAEKGIYDHYMLKEINEQPAVMRRIIQEYEDENGDLNIDSEIIKDVSNADRIYIIAAGTSYHAGLVGKEYLEKLSGVPTEVHVASEFVYNMPLLSEKPLFIYISQSGETADSRAVLVETNKLGHKSLTITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQVVAKAHGRNNGIDLLRELAKVTTAIETIVDDAPVMEKITKEFLETTRNAFFIGRAMDYNVSLEGALKLKEISYIQAEGFAGGELKHGTIALIEDDTPVIALATQENVNLSIRGNVKEVVARGAKPCIISMEGLEKDGDTYVIPHVHELLTPLVSVVALQLIAYYAALHRGLDVDKPRNLAKSVTVE . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 4261 6066 . + . GCA_005502385.1_00911_mRNA GCA_005502385.1_00911 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MCGIVGYIGFDNAKELLLSGLEKLEYRGYDSAGIAVVNDEGTTVFKEKGRIAELRKVADSNDIDGHIGIGHTRWATHGVPSHINSHPHQSNNGRFTLVHNGVIENYEELKSEYLSDVTFKSETDTEVIVQLVEYFSNKGLETEEAFTKAVSLLDGSYALGMLDSEDEDTIYVAKNKSPLLVGIGDDFNVIASDALAMIKVTNQYKEIHDHEIVIVKKESVTIKDKDGNIQDRPTYTAQIDASDAEKGIYDHYMLKEINEQPAVMRRIIQEYEDENGDLNIDSEIIKDVSNADRIYIIAAGTSYHAGLVGKEYLEKLSGVPTEVHVASEFVYNMPLLSEKPLFIYISQSGETADSRAVLVETNKLGHKSLTITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQVVAKAHGRNNGIDLLRELAKVTTAIETIVDDAPVMEKITKEFLETTRNAFFIGRAMDYNVSLEGALKLKEISYIQAEGFAGGELKHGTIALIEDDTPVIALATQENVNLSIRGNVKEVVARGAKPCIISMEGLEKDGDTYVIPHVHELLTPLVSVVALQLIAYYAALHRGLDVDKPRNLAKSVTVE . . . . . . . GCA_005502385.1|SCOV01000020.1 Prodigal:002006 CDS 4261 6066 . + 0 GCA_005502385.1_00911 GCA_005502385.1_00911_gene,GCA_005502385.1_00911_mRNA GCA_005502385.1_00911 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MCGIVGYIGFDNAKELLLSGLEKLEYRGYDSAGIAVVNDEGTTVFKEKGRIAELRKVADSNDIDGHIGIGHTRWATHGVPSHINSHPHQSNNGRFTLVHNGVIENYEELKSEYLSDVTFKSETDTEVIVQLVEYFSNKGLETEEAFTKAVSLLDGSYALGMLDSEDEDTIYVAKNKSPLLVGIGDDFNVIASDALAMIKVTNQYKEIHDHEIVIVKKESVTIKDKDGNIQDRPTYTAQIDASDAEKGIYDHYMLKEINEQPAVMRRIIQEYEDENGDLNIDSEIIKDVSNADRIYIIAAGTSYHAGLVGKEYLEKLSGVPTEVHVASEFVYNMPLLSEKPLFIYISQSGETADSRAVLVETNKLGHKSLTITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQVVAKAHGRNNGIDLLRELAKVTTAIETIVDDAPVMEKITKEFLETTRNAFFIGRAMDYNVSLEGALKLKEISYIQAEGFAGGELKHGTIALIEDDTPVIALATQENVNLSIRGNVKEVVARGAKPCIISMEGLEKDGDTYVIPHVHELLTPLVSVVALQLIAYYAALHRGLDVDKPRNLAKSVTVE persistent 601 glmS glutamine--fructose-6-phosphate transaminase (isomerizing) 2.6.1.16 GO:0004360,GO:1901137 COG0449,M WP_017176081.1 UPI00030F917E UniRef100_A0A4Q9WQ53,UniRef50_Q88YE7,UniRef90_A0A7T8ZLC7 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 6087 6947 . + . GCA_005502385.1_00912_gene GCA_005502385.1_00912 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MTCLSFLFDLLNNQNHHTIILSRGDHLINLKHIYKKKHGKTIINDLNWHIEAGDNWILYGLNGAGKTTLLNIMNSYESVSQGEIELFEMIPGKKGYSAENVRQHIGFVSHSLLEKFQDGEKVIDVVLSGIFKSIGLYKEYSDEHTKEAEKLLNLVGMLSYKDQYLGYLSTGQKQKVMIARALIHQPDVLILDEPASGLDFLAREQLLYLLENLNKTYAHLTMIYVTHVIEEIIPLFSKIFLLKEGSCFGKGITKDILTDSMMSKFFNNQIEVIQYRNRYHLYIKHN . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 6087 6947 . + . GCA_005502385.1_00912_mRNA GCA_005502385.1_00912 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MTCLSFLFDLLNNQNHHTIILSRGDHLINLKHIYKKKHGKTIINDLNWHIEAGDNWILYGLNGAGKTTLLNIMNSYESVSQGEIELFEMIPGKKGYSAENVRQHIGFVSHSLLEKFQDGEKVIDVVLSGIFKSIGLYKEYSDEHTKEAEKLLNLVGMLSYKDQYLGYLSTGQKQKVMIARALIHQPDVLILDEPASGLDFLAREQLLYLLENLNKTYAHLTMIYVTHVIEEIIPLFSKIFLLKEGSCFGKGITKDILTDSMMSKFFNNQIEVIQYRNRYHLYIKHN . . . . . . . GCA_005502385.1|SCOV01000020.1 Prodigal:002006 CDS 6087 6947 . + 0 GCA_005502385.1_00912 GCA_005502385.1_00912_gene,GCA_005502385.1_00912_mRNA GCA_005502385.1_00912 putative ABC transporter ATP-binding protein YlmA GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MTCLSFLFDLLNNQNHHTIILSRGDHLINLKHIYKKKHGKTIINDLNWHIEAGDNWILYGLNGAGKTTLLNIMNSYESVSQGEIELFEMIPGKKGYSAENVRQHIGFVSHSLLEKFQDGEKVIDVVLSGIFKSIGLYKEYSDEHTKEAEKLLNLVGMLSYKDQYLGYLSTGQKQKVMIARALIHQPDVLILDEPASGLDFLAREQLLYLLENLNKTYAHLTMIYVTHVIEEIIPLFSKIFLLKEGSCFGKGITKDILTDSMMSKFFNNQIEVIQYRNRYHLYIKHN persistent 286 ABC transporter ATP-binding protein WP_017176082.1 UPI000382A50B UniRef100_A0A3S7GWF4,UniRef50_A0A6N0I1Z1,UniRef90_A0A6N0I1Z1 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 7010 7870 . + . GCA_005502385.1_00913_gene GCA_005502385.1_00913 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MALENIKAIFLDMDGTLLHEDNKATVKTKEVIDQLREKNYKVFLATGRSYSEIHSLVPKGFKVDGMISSNGTRGDIEDTILFKHSLTIDSVKKIVQLAQQQHIYYEVFPFEGDRISLIEDQSWMEDMIDSERPQNEVSESEWKSRRDAMNGKINWRKDIPNDDYSKIYLFNKKLNKIKTFRDELIQNKVLLNISVSNSSRFNAETMAYQVDKGTGIKEMIDHFDIKQEETLVIGDSDNDRAMFEFGGYTVSMKNARPEIQSITDDTTQYTNEEDGAALYLEQHLLN . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 7010 7870 . + . GCA_005502385.1_00913_mRNA GCA_005502385.1_00913 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MALENIKAIFLDMDGTLLHEDNKATVKTKEVIDQLREKNYKVFLATGRSYSEIHSLVPKGFKVDGMISSNGTRGDIEDTILFKHSLTIDSVKKIVQLAQQQHIYYEVFPFEGDRISLIEDQSWMEDMIDSERPQNEVSESEWKSRRDAMNGKINWRKDIPNDDYSKIYLFNKKLNKIKTFRDELIQNKVLLNISVSNSSRFNAETMAYQVDKGTGIKEMIDHFDIKQEETLVIGDSDNDRAMFEFGGYTVSMKNARPEIQSITDDTTQYTNEEDGAALYLEQHLLN . . . . . . . GCA_005502385.1|SCOV01000020.1 Prodigal:002006 CDS 7010 7870 . + 0 GCA_005502385.1_00913 GCA_005502385.1_00913_gene,GCA_005502385.1_00913_mRNA GCA_005502385.1_00913 Sugar phosphatase YidA GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MALENIKAIFLDMDGTLLHEDNKATVKTKEVIDQLREKNYKVFLATGRSYSEIHSLVPKGFKVDGMISSNGTRGDIEDTILFKHSLTIDSVKKIVQLAQQQHIYYEVFPFEGDRISLIEDQSWMEDMIDSERPQNEVSESEWKSRRDAMNGKINWRKDIPNDDYSKIYLFNKKLNKIKTFRDELIQNKVLLNISVSNSSRFNAETMAYQVDKGTGIKEMIDHFDIKQEETLVIGDSDNDRAMFEFGGYTVSMKNARPEIQSITDDTTQYTNEEDGAALYLEQHLLN persistent 286 Cof-type HAD-IIB family hydrolase WP_049379493.1 UPI00066EAC14 UniRef100_UPI00066EAC14,UniRef50_Q2FWA2,UniRef90_A0A3S7GWK5 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 7927 8979 . - . GCA_005502385.1_00914_gene GCA_005502385.1_00914 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MFKFHSLAFKNAKSQLIKTILFSLVSFIIVFVAFVIARTFFVQNFMQMQLAAQFQQSAGASLSMIILVLVLGLLFFILAGYQLLAGAFNIMAKAIEKEAVQFSDLFFAFKKGKYVKSLLLAFITIIVYAVLYLITLGLNFLFNKALTPLFTSIQQSVSTSDHAIGILLTVQIILIIIMGFILSIVYWFFFILMINYTVSFARKNDLSAIGHFKDGFKGIKNGRKTWFKFFLAILLINLLIIIITQPLGTILTVLTGNMSQNVAQVILIIAQTLIIIVRLILYFVILMGIVQYFLRRGENVNRPVKEKKKSKRKEKNHKKEALKNDPSSFNETKNHVKEDLNHQKNLNNDK . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 7927 8979 . - . GCA_005502385.1_00914_mRNA GCA_005502385.1_00914 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MFKFHSLAFKNAKSQLIKTILFSLVSFIIVFVAFVIARTFFVQNFMQMQLAAQFQQSAGASLSMIILVLVLGLLFFILAGYQLLAGAFNIMAKAIEKEAVQFSDLFFAFKKGKYVKSLLLAFITIIVYAVLYLITLGLNFLFNKALTPLFTSIQQSVSTSDHAIGILLTVQIILIIIMGFILSIVYWFFFILMINYTVSFARKNDLSAIGHFKDGFKGIKNGRKTWFKFFLAILLINLLIIIITQPLGTILTVLTGNMSQNVAQVILIIAQTLIIIVRLILYFVILMGIVQYFLRRGENVNRPVKEKKKSKRKEKNHKKEALKNDPSSFNETKNHVKEDLNHQKNLNNDK . . . . . . . GCA_005502385.1|SCOV01000020.1 Prodigal:002006 CDS 7927 8979 . - 0 GCA_005502385.1_00914 GCA_005502385.1_00914_gene,GCA_005502385.1_00914_mRNA GCA_005502385.1_00914 hypothetical protein GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MFKFHSLAFKNAKSQLIKTILFSLVSFIIVFVAFVIARTFFVQNFMQMQLAAQFQQSAGASLSMIILVLVLGLLFFILAGYQLLAGAFNIMAKAIEKEAVQFSDLFFAFKKGKYVKSLLLAFITIIVYAVLYLITLGLNFLFNKALTPLFTSIQQSVSTSDHAIGILLTVQIILIIIMGFILSIVYWFFFILMINYTVSFARKNDLSAIGHFKDGFKGIKNGRKTWFKFFLAILLINLLIIIITQPLGTILTVLTGNMSQNVAQVILIIAQTLIIIVRLILYFVILMGIVQYFLRRGENVNRPVKEKKKSKRKEKNHKKEALKNDPSSFNETKNHVKEDLNHQKNLNNDK persistent 350 Lytic transglycosylase WP_061544539.1 UPI0007657031 UniRef100_UPI0007657031,UniRef50_A0A2A1K6G5,UniRef90_A0A3S7GZW9 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 9108 9842 . + . GCA_005502385.1_00915_gene GCA_005502385.1_00915 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MVKFAILTDVHGNFDALQTVLDDIDNREDIDQIFNLGDNIGIGHETNKVLDTIFDRDDMEIISGNHDEAIMSIVNGTPYPEDLKNKFYEHHQWIESRMDEDYYDVLNTLPRYLEKTICGKKCLFIHYEIENQRLEEGIDKQPFEPIVDNQKEEIGKLFEDKDADFIAFGHNHQLHLYDDNNKTYFNPGSVGLNNGKYAVYGIVTINENEFSVERVKLPYDNEEFLQGFDEKHVPGKQFIFDHFI . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 9108 9842 . + . GCA_005502385.1_00915_mRNA GCA_005502385.1_00915 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MVKFAILTDVHGNFDALQTVLDDIDNREDIDQIFNLGDNIGIGHETNKVLDTIFDRDDMEIISGNHDEAIMSIVNGTPYPEDLKNKFYEHHQWIESRMDEDYYDVLNTLPRYLEKTICGKKCLFIHYEIENQRLEEGIDKQPFEPIVDNQKEEIGKLFEDKDADFIAFGHNHQLHLYDDNNKTYFNPGSVGLNNGKYAVYGIVTINENEFSVERVKLPYDNEEFLQGFDEKHVPGKQFIFDHFI . . . . . . . GCA_005502385.1|SCOV01000020.1 Prodigal:002006 CDS 9108 9842 . + 0 GCA_005502385.1_00915 GCA_005502385.1_00915_gene,GCA_005502385.1_00915_mRNA GCA_005502385.1_00915 hypothetical protein """""" GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MVKFAILTDVHGNFDALQTVLDDIDNREDIDQIFNLGDNIGIGHETNKVLDTIFDRDDMEIISGNHDEAIMSIVNGTPYPEDLKNKFYEHHQWIESRMDEDYYDVLNTLPRYLEKTICGKKCLFIHYEIENQRLEEGIDKQPFEPIVDNQKEEIGKLFEDKDADFIAFGHNHQLHLYDDNNKTYFNPGSVGLNNGKYAVYGIVTINENEFSVERVKLPYDNEEFLQGFDEKHVPGKQFIFDHFI persistent 244 Metallophosphatase family protein WP_080983432.1 UPI00092AAC0C UniRef100_UPI00092AAC0C,UniRef50_A0AAP8PQK9,UniRef90_A0A2A1M7N2 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 9928 10881 . - . GCA_005502385.1_00916_gene GCA_005502385.1_00916 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MSNHTHHHNHTHNHVHTNNKKVLAISFIIIGLFMIVEILGGFIANSLALLSDGLHMFSDTVSLGVALIAFIYAEKNATSTKTFGYKRFEVLAALFNGITLLIISGVIIIEAIRRFFNPIKVQSTEMFIISVIGLIVNIIVAIIMFKSGDTSHNLNMRGAFIHVLGDLLGSLGAIIASILIYVFNFTIADPIASILVSIIILKSAIGISRSSLNILMEGTPSDVNLDKIISTITNHNEIYNVHDYHVWTISNDMNALSCHAVVSETMSVQDCEGLLKKIEHELLHLNIQHMTIQLETAQHDHDTSVLCSGLHKEHTHH . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 9928 10881 . - . GCA_005502385.1_00916_mRNA GCA_005502385.1_00916 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MSNHTHHHNHTHNHVHTNNKKVLAISFIIIGLFMIVEILGGFIANSLALLSDGLHMFSDTVSLGVALIAFIYAEKNATSTKTFGYKRFEVLAALFNGITLLIISGVIIIEAIRRFFNPIKVQSTEMFIISVIGLIVNIIVAIIMFKSGDTSHNLNMRGAFIHVLGDLLGSLGAIIASILIYVFNFTIADPIASILVSIIILKSAIGISRSSLNILMEGTPSDVNLDKIISTITNHNEIYNVHDYHVWTISNDMNALSCHAVVSETMSVQDCEGLLKKIEHELLHLNIQHMTIQLETAQHDHDTSVLCSGLHKEHTHH . . . . . . . GCA_005502385.1|SCOV01000020.1 Prodigal:002006 CDS 9928 10881 . - 0 GCA_005502385.1_00916 GCA_005502385.1_00916_gene,GCA_005502385.1_00916_mRNA GCA_005502385.1_00916 Cadmium%2C cobalt and zinc/H(+)-K(+) antiporter GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MSNHTHHHNHTHNHVHTNNKKVLAISFIIIGLFMIVEILGGFIANSLALLSDGLHMFSDTVSLGVALIAFIYAEKNATSTKTFGYKRFEVLAALFNGITLLIISGVIIIEAIRRFFNPIKVQSTEMFIISVIGLIVNIIVAIIMFKSGDTSHNLNMRGAFIHVLGDLLGSLGAIIASILIYVFNFTIADPIASILVSIIILKSAIGISRSSLNILMEGTPSDVNLDKIISTITNHNEIYNVHDYHVWTISNDMNALSCHAVVSETMSVQDCEGLLKKIEHELLHLNIQHMTIQLETAQHDHDTSVLCSGLHKEHTHH persistent 317 czrB CDF family zinc efflux transporter CzrB WP_061544540.1 UPI00077891FF UniRef100_UPI00077891FF,UniRef50_A0A7U7JQM3,UniRef90_A0A3S7GWJ6 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 10885 11211 . - . GCA_005502385.1_00917_gene GCA_005502385.1_00917 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MSNTNKDRDIFIDEYMLNRLTETFKALSDYNRLRILELLYKGEASVGHITHTLKLTQSSVSHQLKSLKQAGLVKSSRHGQSMIYSIDDQHVSTLLKQAIQHAHHQRGE . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 10885 11211 . - . GCA_005502385.1_00917_mRNA GCA_005502385.1_00917 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MSNTNKDRDIFIDEYMLNRLTETFKALSDYNRLRILELLYKGEASVGHITHTLKLTQSSVSHQLKSLKQAGLVKSSRHGQSMIYSIDDQHVSTLLKQAIQHAHHQRGE . . . . . . . GCA_005502385.1|SCOV01000020.1 Prodigal:002006 CDS 10885 11211 . - 0 GCA_005502385.1_00917 GCA_005502385.1_00917_gene,GCA_005502385.1_00917_mRNA GCA_005502385.1_00917 HTH-type transcriptional repressor CzrA GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MSNTNKDRDIFIDEYMLNRLTETFKALSDYNRLRILELLYKGEASVGHITHTLKLTQSSVSHQLKSLKQAGLVKSSRHGQSMIYSIDDQHVSTLLKQAIQHAHHQRGE persistent 108 arsR ArsR family transcriptional regulator WP_061544541.1 UPI000778D589 UniRef100_UPI000778D589,UniRef50_Q2FWB0,UniRef90_A0A2A1M9M2 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 11367 12023 . + . GCA_005502385.1_00918_gene GCA_005502385.1_00918 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MSILVIGANGGVGSKLVNQLKEDQVDFTAGVRKEEQESALKDQGVNAILIDVEKDSIDDLTEKFKGFDKVIFSVGSGGSTGADKTIIVDLDGAVKTIEASKKANVKHYVMVSTYDSRREAFDASGDLKPYTIAKHYADNHLRNSGLTYTIVHPGGLEDKSGTGEIKADLYFDEGSTIPREDVASVLKHVVTSEDKFENKEFQILSGDQSIQEALSRFE . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 11367 12023 . + . GCA_005502385.1_00918_mRNA GCA_005502385.1_00918 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MSILVIGANGGVGSKLVNQLKEDQVDFTAGVRKEEQESALKDQGVNAILIDVEKDSIDDLTEKFKGFDKVIFSVGSGGSTGADKTIIVDLDGAVKTIEASKKANVKHYVMVSTYDSRREAFDASGDLKPYTIAKHYADNHLRNSGLTYTIVHPGGLEDKSGTGEIKADLYFDEGSTIPREDVASVLKHVVTSEDKFENKEFQILSGDQSIQEALSRFE . . . . . . . GCA_005502385.1|SCOV01000020.1 Prodigal:002006 CDS 11367 12023 . + 0 GCA_005502385.1_00918 GCA_005502385.1_00918_gene,GCA_005502385.1_00918_mRNA GCA_005502385.1_00918 putative sugar epimerase YhfK GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MSILVIGANGGVGSKLVNQLKEDQVDFTAGVRKEEQESALKDQGVNAILIDVEKDSIDDLTEKFKGFDKVIFSVGSGGSTGADKTIIVDLDGAVKTIEASKKANVKHYVMVSTYDSRREAFDASGDLKPYTIAKHYADNHLRNSGLTYTIVHPGGLEDKSGTGEIKADLYFDEGSTIPREDVASVLKHVVTSEDKFENKEFQILSGDQSIQEALSRFE persistent 218 NAD(P)-dependent oxidoreductase WP_049416377.1 UPI00066B81C4 UniRef100_UPI00066B81C4,UniRef50_A0A1W7A9I9,UniRef90_A0A2A1M6G6 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 12365 13297 . + . GCA_005502385.1_00919_gene GCA_005502385.1_00919 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MPLFLKPIFFEKIWGGNKLNQFNYDIPSEQTGECWGISAHPNGKNMIENGQYAGQTLDQVWNEHRELFGDFPSKDFPLLCKIVDARHPLSIHVHPDNSYAYEFENGQYGKSECWYIIDAEEDAEIILGTSADSKETFENKIKEDAVLDAVERIKVKPGEFYFIPAGMLHSIGSGVLVYETMQSSDISYRVYDYERNRTDGSSLEVSKALDVIQFTANAPTIVPETTIVENHKRSQIVSNDFFTMVKWEISGTLNYMKPREFCLISVLEGRGQVITDGEIFKLEKGSNFILTSEDLDSVFEGEFTLIISYI . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 12365 13297 . + . GCA_005502385.1_00919_mRNA GCA_005502385.1_00919 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MPLFLKPIFFEKIWGGNKLNQFNYDIPSEQTGECWGISAHPNGKNMIENGQYAGQTLDQVWNEHRELFGDFPSKDFPLLCKIVDARHPLSIHVHPDNSYAYEFENGQYGKSECWYIIDAEEDAEIILGTSADSKETFENKIKEDAVLDAVERIKVKPGEFYFIPAGMLHSIGSGVLVYETMQSSDISYRVYDYERNRTDGSSLEVSKALDVIQFTANAPTIVPETTIVENHKRSQIVSNDFFTMVKWEISGTLNYMKPREFCLISVLEGRGQVITDGEIFKLEKGSNFILTSEDLDSVFEGEFTLIISYI . . . . . . . GCA_005502385.1|SCOV01000020.1 Prodigal:002006 CDS 12365 13297 . + 0 GCA_005502385.1_00919 GCA_005502385.1_00919_gene,GCA_005502385.1_00919_mRNA GCA_005502385.1_00919 putative mannose-6-phosphate isomerase GmuF GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MPLFLKPIFFEKIWGGNKLNQFNYDIPSEQTGECWGISAHPNGKNMIENGQYAGQTLDQVWNEHRELFGDFPSKDFPLLCKIVDARHPLSIHVHPDNSYAYEFENGQYGKSECWYIIDAEEDAEIILGTSADSKETFENKIKEDAVLDAVERIKVKPGEFYFIPAGMLHSIGSGVLVYETMQSSDISYRVYDYERNRTDGSSLEVSKALDVIQFTANAPTIVPETTIVENHKRSQIVSNDFFTMVKWEISGTLNYMKPREFCLISVLEGRGQVITDGEIFKLEKGSNFILTSEDLDSVFEGEFTLIISYI persistent 310 manA mannose-6-phosphate isomerase, class I 5.3.1.8 GO:0004476,GO:0005975,GO:0008270 WP_061544546.1 UPI0007789633 UniRef100_UPI0007789633,UniRef50_A0A0A8HNJ1,UniRef90_A0A3S7GX74 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 13696 15069 . + . GCA_005502385.1_00920_gene GCA_005502385.1_00920 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MAEEVNYFWLNCGYTRWNHNEPLVGQTTLFESGAQFNPTQGFRAFKKAKIGDQVIFYQVQTDTGLLGIGEIISVQTGAQNKIRVEFKFNEELKPLTTDYLKRSEVLDYRMNNMRETLINQLTKEEFQLIVELGKGNIQLPRYFFLSETEKFEPDTHYTIFTHTYNGIKRNGYHFYNQLEVGDNLIFYDKNSNQSVVGIGEVSRHIHEKPPIPGRTNSTAIEIYYEKNITPVTLGALNKHPKLKNLYFLQENAKQAIASMSQAQYDAIIDMSENDGIRTPFETIKKPGFNTDHDETIKPFILLVVDKREEGLKAANNLLQKTNANPVITSGHPDFSEDMLYGKYLPNETGALYYREGFITQLMPKNDKSYLVIDNFNRLDPDIFQTYINVLEGYEVTLPRYNKDGNMITWSREKNSFYHFNPNWHIIGVTYEKLEDIKNKYSQQFLKYTRIVKVNHDA . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 13696 15069 . + . GCA_005502385.1_00920_mRNA GCA_005502385.1_00920 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MAEEVNYFWLNCGYTRWNHNEPLVGQTTLFESGAQFNPTQGFRAFKKAKIGDQVIFYQVQTDTGLLGIGEIISVQTGAQNKIRVEFKFNEELKPLTTDYLKRSEVLDYRMNNMRETLINQLTKEEFQLIVELGKGNIQLPRYFFLSETEKFEPDTHYTIFTHTYNGIKRNGYHFYNQLEVGDNLIFYDKNSNQSVVGIGEVSRHIHEKPPIPGRTNSTAIEIYYEKNITPVTLGALNKHPKLKNLYFLQENAKQAIASMSQAQYDAIIDMSENDGIRTPFETIKKPGFNTDHDETIKPFILLVVDKREEGLKAANNLLQKTNANPVITSGHPDFSEDMLYGKYLPNETGALYYREGFITQLMPKNDKSYLVIDNFNRLDPDIFQTYINVLEGYEVTLPRYNKDGNMITWSREKNSFYHFNPNWHIIGVTYEKLEDIKNKYSQQFLKYTRIVKVNHDA . . . . . . . GCA_005502385.1|SCOV01000020.1 Prodigal:002006 CDS 13696 15069 . + 0 GCA_005502385.1_00920 GCA_005502385.1_00920_gene,GCA_005502385.1_00920_mRNA GCA_005502385.1_00920 hypothetical protein GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MAEEVNYFWLNCGYTRWNHNEPLVGQTTLFESGAQFNPTQGFRAFKKAKIGDQVIFYQVQTDTGLLGIGEIISVQTGAQNKIRVEFKFNEELKPLTTDYLKRSEVLDYRMNNMRETLINQLTKEEFQLIVELGKGNIQLPRYFFLSETEKFEPDTHYTIFTHTYNGIKRNGYHFYNQLEVGDNLIFYDKNSNQSVVGIGEVSRHIHEKPPIPGRTNSTAIEIYYEKNITPVTLGALNKHPKLKNLYFLQENAKQAIASMSQAQYDAIIDMSENDGIRTPFETIKKPGFNTDHDETIKPFILLVVDKREEGLKAANNLLQKTNANPVITSGHPDFSEDMLYGKYLPNETGALYYREGFITQLMPKNDKSYLVIDNFNRLDPDIFQTYINVLEGYEVTLPRYNKDGNMITWSREKNSFYHFNPNWHIIGVTYEKLEDIKNKYSQQFLKYTRIVKVNHDA persistent 457 EVE domain protein WP_049382646.1 UPI00066DBEA7 UniRef100_UPI00066DBEA7,UniRef50_Q49Z89,UniRef90_A0A380FWV2 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 15220 15615 . + . GCA_005502385.1_00921_gene GCA_005502385.1_00921 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MPIVYYDGNCVYCYNYCIWLIQHGLPKNYEFATLKGEAGQHLFKQHPEAKNKNSVILQEGDRLYYETTAVAKLITTLSSKKWLGILLRVMPLPIRNLGYRLFANNRDKMWKTHWHKPNAYEKSFFIDDDRQ . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 15220 15615 . + . GCA_005502385.1_00921_mRNA GCA_005502385.1_00921 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MPIVYYDGNCVYCYNYCIWLIQHGLPKNYEFATLKGEAGQHLFKQHPEAKNKNSVILQEGDRLYYETTAVAKLITTLSSKKWLGILLRVMPLPIRNLGYRLFANNRDKMWKTHWHKPNAYEKSFFIDDDRQ . . . . . . . GCA_005502385.1|SCOV01000020.1 Prodigal:002006 CDS 15220 15615 . + 0 GCA_005502385.1_00921 GCA_005502385.1_00921_gene,GCA_005502385.1_00921_mRNA GCA_005502385.1_00921 hypothetical protein GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MPIVYYDGNCVYCYNYCIWLIQHGLPKNYEFATLKGEAGQHLFKQHPEAKNKNSVILQEGDRLYYETTAVAKLITTLSSKKWLGILLRVMPLPIRNLGYRLFANNRDKMWKTHWHKPNAYEKSFFIDDDRQ persistent 131 DUF393 domain-containing protein WP_019835530.1 UPI0003670A41 UniRef100_A0A8I0WBM6,UniRef50_Q2FWB6,UniRef90_A0AAE5JKN3 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 15826 16266 . + . GCA_005502385.1_00922_gene GCA_005502385.1_00922 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MTQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHEKFEELYNEASQYVDDLAERILAIGGNPVATLKESLELSIVKEAETHYTAEEMVKAFSEDLTQISKQLGKAIEVAGEAGDDVSEDMFIGMQTSVDKHNWMFKSYLV . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 15826 16266 . + . GCA_005502385.1_00922_mRNA GCA_005502385.1_00922 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MTQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHEKFEELYNEASQYVDDLAERILAIGGNPVATLKESLELSIVKEAETHYTAEEMVKAFSEDLTQISKQLGKAIEVAGEAGDDVSEDMFIGMQTSVDKHNWMFKSYLV . . . . . . . GCA_005502385.1|SCOV01000020.1 Prodigal:002006 CDS 15826 16266 . + 0 GCA_005502385.1_00922 GCA_005502385.1_00922_gene,GCA_005502385.1_00922_mRNA GCA_005502385.1_00922 General stress protein 20U GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MTQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHEKFEELYNEASQYVDDLAERILAIGGNPVATLKESLELSIVKEAETHYTAEEMVKAFSEDLTQISKQLGKAIEVAGEAGDDVSEDMFIGMQTSVDKHNWMFKSYLV persistent 146 DNA starvation/stationary phase protection protein WP_017176090.1 UPI0002FAACE4 UniRef100_A0A3S7H0C4,UniRef50_Q8RPQ2,UniRef90_A0A657M2N5 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 16352 17062 . - . GCA_005502385.1_00923_gene GCA_005502385.1_00923 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MTNGTPHIQPNGTKIAKTVLMPGDPLRAKYIADNFLENVEQFNEVRNMFGYTGTYKGKEISVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVDQFNIPGHFAPIADFELITKAKQVADDIGAVTHVGNILSSDTFYNADKHFNDSWKNMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATSAEERQTSFTQMMEIALEIAE . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 16352 17062 . - . GCA_005502385.1_00923_mRNA GCA_005502385.1_00923 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MTNGTPHIQPNGTKIAKTVLMPGDPLRAKYIADNFLENVEQFNEVRNMFGYTGTYKGKEISVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVDQFNIPGHFAPIADFELITKAKQVADDIGAVTHVGNILSSDTFYNADKHFNDSWKNMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATSAEERQTSFTQMMEIALEIAE . . . . . . . GCA_005502385.1|SCOV01000020.1 Prodigal:002006 CDS 16352 17062 . - 0 GCA_005502385.1_00923 GCA_005502385.1_00923_gene,GCA_005502385.1_00923_mRNA GCA_005502385.1_00923 Purine nucleoside phosphorylase DeoD-type GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MTNGTPHIQPNGTKIAKTVLMPGDPLRAKYIADNFLENVEQFNEVRNMFGYTGTYKGKEISVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVDQFNIPGHFAPIADFELITKAKQVADDIGAVTHVGNILSSDTFYNADKHFNDSWKNMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATSAEERQTSFTQMMEIALEIAE persistent 236 deoD purine-nucleoside phosphorylase 2.4.2.1 GO:0004731,GO:0006139 COG0813,F WP_017176091.1 UPI00031D735F UniRef100_A0A8X8KJI8,UniRef50_A0A1C5V1M1,UniRef90_A0A2K4AEZ2 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 17209 17871 . + . GCA_005502385.1_00924_gene GCA_005502385.1_00924 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MEYSKYIDHTLLKPESTRQQIDKIISEAKAYHFKSICVNPTHVKYASEQLVNSYVLVCTVIGFPLGATTTATKIFETEDAIKNGASEIDMVINIGALKDGRYEDVQKDIEGVVGAANGKIVKVIIETVLLTDDEKVKASELAKAAGADFVKTSTGFAGGGATPEDVKLMKDTVGDELEVKASGGVRNLEDFNKMIDAGATRIGASAGVQIIQGLESDSDY . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 17209 17871 . + . GCA_005502385.1_00924_mRNA GCA_005502385.1_00924 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MEYSKYIDHTLLKPESTRQQIDKIISEAKAYHFKSICVNPTHVKYASEQLVNSYVLVCTVIGFPLGATTTATKIFETEDAIKNGASEIDMVINIGALKDGRYEDVQKDIEGVVGAANGKIVKVIIETVLLTDDEKVKASELAKAAGADFVKTSTGFAGGGATPEDVKLMKDTVGDELEVKASGGVRNLEDFNKMIDAGATRIGASAGVQIIQGLESDSDY . . . . . . . GCA_005502385.1|SCOV01000020.1 Prodigal:002006 CDS 17209 17871 . + 0 GCA_005502385.1_00924 GCA_005502385.1_00924_gene,GCA_005502385.1_00924_mRNA GCA_005502385.1_00924 Deoxyribose-phosphate aldolase 1 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MEYSKYIDHTLLKPESTRQQIDKIISEAKAYHFKSICVNPTHVKYASEQLVNSYVLVCTVIGFPLGATTTATKIFETEDAIKNGASEIDMVINIGALKDGRYEDVQKDIEGVVGAANGKIVKVIIETVLLTDDEKVKASELAKAAGADFVKTSTGFAGGGATPEDVKLMKDTVGDELEVKASGGVRNLEDFNKMIDAGATRIGASAGVQIIQGLESDSDY persistent 220 deoC deoxyribose-phosphate aldolase 4.1.2.4 GO:0004139,GO:0005737,GO:0009264 UniRef50_Q4L819,UniRef90_A0A6N0I1S8 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 17933 19234 . + . GCA_005502385.1_00925_gene GCA_005502385.1_00925 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MRMIDIIEKKRDGKSLSKEEIEFFIKGYTEGDIPDYQASSLAMAIFFQDMNEEERAALTMAMVNSGDVIDLSKVNGIKVDKHSTGGVGDTTTLVLAPLVAAVGVPVAKMSGRGLGHTGGTIDKLESIDGFHVEISEADFIKLVNEDQVAVIGQTGNLTPADKKLYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGNGAFMKTLEDAEALAHAMVSIGNNVGRNTMAIISDMSQPLGRAIGNALELKEAIDTLNGQGPEDLTELVLTLGSQMVVLAERASTLEEARQLLNEAIENGSALDKFKTFLENQGGDASVVDSPELLPTAEYQIDYKAKSSGVVSELIANEIGVASMMLGAGRQTKEDDIDLSVGIVLNKKVGDNVNEGESLLTIHSNRENVDDVIKKLDESIEIKAQAKTPTLIHKIITE . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 17933 19234 . + . GCA_005502385.1_00925_mRNA GCA_005502385.1_00925 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MRMIDIIEKKRDGKSLSKEEIEFFIKGYTEGDIPDYQASSLAMAIFFQDMNEEERAALTMAMVNSGDVIDLSKVNGIKVDKHSTGGVGDTTTLVLAPLVAAVGVPVAKMSGRGLGHTGGTIDKLESIDGFHVEISEADFIKLVNEDQVAVIGQTGNLTPADKKLYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGNGAFMKTLEDAEALAHAMVSIGNNVGRNTMAIISDMSQPLGRAIGNALELKEAIDTLNGQGPEDLTELVLTLGSQMVVLAERASTLEEARQLLNEAIENGSALDKFKTFLENQGGDASVVDSPELLPTAEYQIDYKAKSSGVVSELIANEIGVASMMLGAGRQTKEDDIDLSVGIVLNKKVGDNVNEGESLLTIHSNRENVDDVIKKLDESIEIKAQAKTPTLIHKIITE . . . . . . . GCA_005502385.1|SCOV01000020.1 Prodigal:002006 CDS 17933 19234 . + 0 GCA_005502385.1_00925 GCA_005502385.1_00925_gene,GCA_005502385.1_00925_mRNA GCA_005502385.1_00925 Pyrimidine-nucleoside phosphorylase GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MRMIDIIEKKRDGKSLSKEEIEFFIKGYTEGDIPDYQASSLAMAIFFQDMNEEERAALTMAMVNSGDVIDLSKVNGIKVDKHSTGGVGDTTTLVLAPLVAAVGVPVAKMSGRGLGHTGGTIDKLESIDGFHVEISEADFIKLVNEDQVAVIGQTGNLTPADKKLYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGNGAFMKTLEDAEALAHAMVSIGNNVGRNTMAIISDMSQPLGRAIGNALELKEAIDTLNGQGPEDLTELVLTLGSQMVVLAERASTLEEARQLLNEAIENGSALDKFKTFLENQGGDASVVDSPELLPTAEYQIDYKAKSSGVVSELIANEIGVASMMLGAGRQTKEDDIDLSVGIVLNKKVGDNVNEGESLLTIHSNRENVDDVIKKLDESIEIKAQAKTPTLIHKIITE persistent 433 pdp pyrimidine-nucleoside phosphorylase 2.4.2.2 GO:0004645,GO:0004850,GO:0005829,GO:0006206,GO:0006213,GO:0009032,GO:0016154,GO:0046872,GO:0047847 COG0213,F WP_017176093.1 UPI00036B92F3 UniRef100_A0A4Q9WNX5,UniRef50_Q99SC3,UniRef90_Q4L818 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 19246 20430 . + . GCA_005502385.1_00926_gene GCA_005502385.1_00926 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MTTPFKRVHLIVMDSVGIGEAPDAAAFNDEGSHTLKHTLEGFNQSLPNLEKLGLGNIEDLPVVNKVEQPGAFYTKLSEASVGKDTMTGHWEIMGLNIMQPFKVYPNGFPDELIQEIEEMTGRKVVANKPASGTAIIDELGEHQMKTGDLIVYTSADPVLQIAAHEDIIPLEELYDICEKVRELTKDPKYLIGRVIARPYVGEPGNFTRTSNRHDYALKPFGKTVMNTLKDSDYDVIAIGKINDIYDGEGVTEAIRTKNNMDGMDKLIEVVKKDFNGLSFLNLVDFDALYGHRRDKEGYAQAIKDFDERLPELIDNLQEDDLVIITADHGNDPIAEGTDHTREYIPVLMFSPKIDAYHELSGDTTFSSIGATIADNFNVELPKYGKSYLKEMGVE . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 19246 20430 . + . GCA_005502385.1_00926_mRNA GCA_005502385.1_00926 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MTTPFKRVHLIVMDSVGIGEAPDAAAFNDEGSHTLKHTLEGFNQSLPNLEKLGLGNIEDLPVVNKVEQPGAFYTKLSEASVGKDTMTGHWEIMGLNIMQPFKVYPNGFPDELIQEIEEMTGRKVVANKPASGTAIIDELGEHQMKTGDLIVYTSADPVLQIAAHEDIIPLEELYDICEKVRELTKDPKYLIGRVIARPYVGEPGNFTRTSNRHDYALKPFGKTVMNTLKDSDYDVIAIGKINDIYDGEGVTEAIRTKNNMDGMDKLIEVVKKDFNGLSFLNLVDFDALYGHRRDKEGYAQAIKDFDERLPELIDNLQEDDLVIITADHGNDPIAEGTDHTREYIPVLMFSPKIDAYHELSGDTTFSSIGATIADNFNVELPKYGKSYLKEMGVE . . . . . . . GCA_005502385.1|SCOV01000020.1 Prodigal:002006 CDS 19246 20430 . + 0 GCA_005502385.1_00926 GCA_005502385.1_00926_gene,GCA_005502385.1_00926_mRNA GCA_005502385.1_00926 Phosphopentomutase GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MTTPFKRVHLIVMDSVGIGEAPDAAAFNDEGSHTLKHTLEGFNQSLPNLEKLGLGNIEDLPVVNKVEQPGAFYTKLSEASVGKDTMTGHWEIMGLNIMQPFKVYPNGFPDELIQEIEEMTGRKVVANKPASGTAIIDELGEHQMKTGDLIVYTSADPVLQIAAHEDIIPLEELYDICEKVRELTKDPKYLIGRVIARPYVGEPGNFTRTSNRHDYALKPFGKTVMNTLKDSDYDVIAIGKINDIYDGEGVTEAIRTKNNMDGMDKLIEVVKKDFNGLSFLNLVDFDALYGHRRDKEGYAQAIKDFDERLPELIDNLQEDDLVIITADHGNDPIAEGTDHTREYIPVLMFSPKIDAYHELSGDTTFSSIGATIADNFNVELPKYGKSYLKEMGVE persistent 394 deoB phosphopentomutase 5.4.2.7 GO:0000287,GO:0005737,GO:0005829,GO:0006015,GO:0006018,GO:0008973,GO:0009117,GO:0030145,GO:0043094 COG1015,G WP_019835529.1 UPI000372872B UniRef100_UPI000372872B,UniRef50_Q8DQD0,UniRef90_Q8CNH9 . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka gene 20433 20783 . + . GCA_005502385.1_00927_gene GCA_005502385.1_00927 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MKIMRYLLGLAFGTAGILHFTKERQFRSIVPEYLPLRKTAVLVTGVFEMFFGVMLLAKKPADWLKKGINAFLLAVFPGNIYMARKQLPLGNKSIPKWALYLRLPLQFILIAIVKKL . . . . . . . GCA_005502385.1|SCOV01000020.1 prokka mRNA 20433 20783 . + . GCA_005502385.1_00927_mRNA GCA_005502385.1_00927 GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MKIMRYLLGLAFGTAGILHFTKERQFRSIVPEYLPLRKTAVLVTGVFEMFFGVMLLAKKPADWLKKGINAFLLAVFPGNIYMARKQLPLGNKSIPKWALYLRLPLQFILIAIVKKL . . . . . . . GCA_005502385.1|SCOV01000020.1 Prodigal:002006 CDS 20433 20783 . + 0 GCA_005502385.1_00927 GCA_005502385.1_00927_gene,GCA_005502385.1_00927_mRNA GCA_005502385.1_00927 hypothetical protein GCA_005502385.1 SCOV01000020.1 GCA_005502385.1|SCOV01000020.1 GCA_005502385.1_SCOV01000020.1 MKIMRYLLGLAFGTAGILHFTKERQFRSIVPEYLPLRKTAVLVTGVFEMFFGVMLLAKKPADWLKKGINAFLLAVFPGNIYMARKQLPLGNKSIPKWALYLRLPLQFILIAIVKKL persistent 116 doxX DoxX family membrane protein WP_017176095.1 UPI0002EC9FC6 UniRef100_A0A3S7GX25,UniRef50_B9DJX6,UniRef90_A0A533IWP5 . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka gene 86 1408 . - . GCA_005502385.1_00928_gene GCA_005502385.1_00928 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MTMKHMHLSVLAYSTGLHPASWRLPHSYVEEVGDINFQIKLAKLAEKGKLDAFFLGDGQYISGEETGHISYYFEPLTALAAISRETHSIGLIGTISSSFYEPYLAARMLSSLHQISHGRIGANIVTSQFDLEAQNYSMQALPHLEKRYERADEFINVMKKLWESFTVEAIVNHKDSGIGLNHQYIHPLHYQGKYFQVAGAINIPTPKYGRPRLFQAGTSIPGRDLAVRHVDAIFSIAWNLQDGQQFRQDIHQRAMEANRQPPLVLPGLTVYVDENEEDAYKLKQQLDDMIPLEKRKKQLSKAIGLDISEWKLDEVVPSLPPYDALEKKVVKSVYEAVQRAVMTEHLTLRDVLDRFGTWVGHKTIVGTPEQVADEMIEWFEKEACDGFMLMSPTYPNAFEKFIDLVIPVLQARGVFRKEYESHMLKDHLNINTSPGHKVSR . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka mRNA 86 1408 . - . GCA_005502385.1_00928_mRNA GCA_005502385.1_00928 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MTMKHMHLSVLAYSTGLHPASWRLPHSYVEEVGDINFQIKLAKLAEKGKLDAFFLGDGQYISGEETGHISYYFEPLTALAAISRETHSIGLIGTISSSFYEPYLAARMLSSLHQISHGRIGANIVTSQFDLEAQNYSMQALPHLEKRYERADEFINVMKKLWESFTVEAIVNHKDSGIGLNHQYIHPLHYQGKYFQVAGAINIPTPKYGRPRLFQAGTSIPGRDLAVRHVDAIFSIAWNLQDGQQFRQDIHQRAMEANRQPPLVLPGLTVYVDENEEDAYKLKQQLDDMIPLEKRKKQLSKAIGLDISEWKLDEVVPSLPPYDALEKKVVKSVYEAVQRAVMTEHLTLRDVLDRFGTWVGHKTIVGTPEQVADEMIEWFEKEACDGFMLMSPTYPNAFEKFIDLVIPVLQARGVFRKEYESHMLKDHLNINTSPGHKVSR . . . . . . . GCA_005502385.1|SCOV01000021.1 Prodigal:002006 CDS 86 1408 . - 0 GCA_005502385.1_00928 GCA_005502385.1_00928_gene,GCA_005502385.1_00928_mRNA GCA_005502385.1_00928 Nitrilotriacetate monooxygenase component A GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MTMKHMHLSVLAYSTGLHPASWRLPHSYVEEVGDINFQIKLAKLAEKGKLDAFFLGDGQYISGEETGHISYYFEPLTALAAISRETHSIGLIGTISSSFYEPYLAARMLSSLHQISHGRIGANIVTSQFDLEAQNYSMQALPHLEKRYERADEFINVMKKLWESFTVEAIVNHKDSGIGLNHQYIHPLHYQGKYFQVAGAINIPTPKYGRPRLFQAGTSIPGRDLAVRHVDAIFSIAWNLQDGQQFRQDIHQRAMEANRQPPLVLPGLTVYVDENEEDAYKLKQQLDDMIPLEKRKKQLSKAIGLDISEWKLDEVVPSLPPYDALEKKVVKSVYEAVQRAVMTEHLTLRDVLDRFGTWVGHKTIVGTPEQVADEMIEWFEKEACDGFMLMSPTYPNAFEKFIDLVIPVLQARGVFRKEYESHMLKDHLNINTSPGHKVSR persistent 440 NtaA/DmoA family FMN-dependent monooxygenase UniRef50_A0A0D0RRV9,UniRef90_A0A8X8KLF3 . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka gene 1498 2532 . - . GCA_005502385.1_00929_gene GCA_005502385.1_00929 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MINIHNIYYMLSYAFTVLNKKGYQHIATESFNNVADLYSALLIKGVSSQLKYGLQHDYLEHNDSLNVIRGKINVTASIKQGTMMHKRLNCTYDEFSINTYMNQILKTTMLNVLKLDISRTRKKALKRLLIYFKHVDILDYRHIDWQLRFDRHHETYRMLMAICYLVTQGRIQSERSGSRETMMFEDEQQMARLYERFVRAYYKKEFPQLKVTASHIPWAIDDDHRHMLPTMRSDVMLTYGKQCLIIDTKYYTSTLQQYFDTRTIHSGNLYQIFAYVKNEALHLKPKQINVAGMLLYAKTDEQLVPDNTFQMSGNTISVKTLDLNQDFIHIAKQLDNIVYNYFKI . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka mRNA 1498 2532 . - . GCA_005502385.1_00929_mRNA GCA_005502385.1_00929 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MINIHNIYYMLSYAFTVLNKKGYQHIATESFNNVADLYSALLIKGVSSQLKYGLQHDYLEHNDSLNVIRGKINVTASIKQGTMMHKRLNCTYDEFSINTYMNQILKTTMLNVLKLDISRTRKKALKRLLIYFKHVDILDYRHIDWQLRFDRHHETYRMLMAICYLVTQGRIQSERSGSRETMMFEDEQQMARLYERFVRAYYKKEFPQLKVTASHIPWAIDDDHRHMLPTMRSDVMLTYGKQCLIIDTKYYTSTLQQYFDTRTIHSGNLYQIFAYVKNEALHLKPKQINVAGMLLYAKTDEQLVPDNTFQMSGNTISVKTLDLNQDFIHIAKQLDNIVYNYFKI . . . . . . . GCA_005502385.1|SCOV01000021.1 Prodigal:002006 CDS 1498 2532 . - 0 GCA_005502385.1_00929 GCA_005502385.1_00929_gene,GCA_005502385.1_00929_mRNA GCA_005502385.1_00929 Protein McrC GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MINIHNIYYMLSYAFTVLNKKGYQHIATESFNNVADLYSALLIKGVSSQLKYGLQHDYLEHNDSLNVIRGKINVTASIKQGTMMHKRLNCTYDEFSINTYMNQILKTTMLNVLKLDISRTRKKALKRLLIYFKHVDILDYRHIDWQLRFDRHHETYRMLMAICYLVTQGRIQSERSGSRETMMFEDEQQMARLYERFVRAYYKKEFPQLKVTASHIPWAIDDDHRHMLPTMRSDVMLTYGKQCLIIDTKYYTSTLQQYFDTRTIHSGNLYQIFAYVKNEALHLKPKQINVAGMLLYAKTDEQLVPDNTFQMSGNTISVKTLDLNQDFIHIAKQLDNIVYNYFKI persistent 344 mcrC 5-methylcytosine-specific restriction endonuclease system specificity protein McrC 3.1.21.- GO:0009307 WP_017174729.1 UPI0002ECC1E3 UniRef100_A0A3S7GVI5,UniRef50_A0A0C7NT27,UniRef90_A0A3S7GVI5 . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka gene 2529 4649 . - . GCA_005502385.1_00930_gene GCA_005502385.1_00930 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MDYKIDKTWAIFYKALAHKLLEYQNCRDQLIEKIRELYINTQIHMPKLEINNEIIDMDPFTVFGLFNKSSMTKKNRIKIIEEMAKLFDVKADIPRNFDGIPTVMNLRATFYNFKNDREAQDIENLWSLFEIALLYSSDKSEDNENNFKRKFNQVMAQPGIGMGKLTSGLFWIDSDTFANLDSRAIWYIFEESEISTKYINFEVNLKKSLTATTYLMMIEKLKLFLKDDNYLNDFIDLSYEAWRKSKEIKQSSKVKDIDADKDLEVVNYWIYSPKPQDVDFASFIENGEMSIGYNELEDFSNYASKEEINQKLQQLNHNQHHYIHTVNAIWEFSKEMKRGDIVYVKKGQTDIVGWGVVSSNHQYKNHKNIIQLVWKEKGNWKIPSKTLNKTLTKITPYSETIRKFNELFSVEHSDGLVATQTTYPVYTAEQFLDDVFMNEEDYDTLVQLIRRKKNVILQGPPGVGKTYAAKRLAYSMMGVKDKERVKLVQFHQSYAYEDFVMGYRPTETGFELRTGAFYNFCKQAEEDSEKDYFFIIDEINRGNLSKIFGELFMLIENDKRGMEIELLYADEKFCVPDNVYIIGMMNTADRSLAILDYALRRRFAFFDMKPAFETIQFKQYQENLKNPQFEALIDAIEALNVDIREDDMLGEGFVIGHSYFSNIVNITESELSNIIEFEIIPLLKEYWFDDSSKVDIWKVRLRDAIQ . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka mRNA 2529 4649 . - . GCA_005502385.1_00930_mRNA GCA_005502385.1_00930 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MDYKIDKTWAIFYKALAHKLLEYQNCRDQLIEKIRELYINTQIHMPKLEINNEIIDMDPFTVFGLFNKSSMTKKNRIKIIEEMAKLFDVKADIPRNFDGIPTVMNLRATFYNFKNDREAQDIENLWSLFEIALLYSSDKSEDNENNFKRKFNQVMAQPGIGMGKLTSGLFWIDSDTFANLDSRAIWYIFEESEISTKYINFEVNLKKSLTATTYLMMIEKLKLFLKDDNYLNDFIDLSYEAWRKSKEIKQSSKVKDIDADKDLEVVNYWIYSPKPQDVDFASFIENGEMSIGYNELEDFSNYASKEEINQKLQQLNHNQHHYIHTVNAIWEFSKEMKRGDIVYVKKGQTDIVGWGVVSSNHQYKNHKNIIQLVWKEKGNWKIPSKTLNKTLTKITPYSETIRKFNELFSVEHSDGLVATQTTYPVYTAEQFLDDVFMNEEDYDTLVQLIRRKKNVILQGPPGVGKTYAAKRLAYSMMGVKDKERVKLVQFHQSYAYEDFVMGYRPTETGFELRTGAFYNFCKQAEEDSEKDYFFIIDEINRGNLSKIFGELFMLIENDKRGMEIELLYADEKFCVPDNVYIIGMMNTADRSLAILDYALRRRFAFFDMKPAFETIQFKQYQENLKNPQFEALIDAIEALNVDIREDDMLGEGFVIGHSYFSNIVNITESELSNIIEFEIIPLLKEYWFDDSSKVDIWKVRLRDAIQ . . . . . . . GCA_005502385.1|SCOV01000021.1 Prodigal:002006 CDS 2529 4649 . - 0 GCA_005502385.1_00930 GCA_005502385.1_00930_gene,GCA_005502385.1_00930_mRNA GCA_005502385.1_00930 hypothetical protein """""" GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MDYKIDKTWAIFYKALAHKLLEYQNCRDQLIEKIRELYINTQIHMPKLEINNEIIDMDPFTVFGLFNKSSMTKKNRIKIIEEMAKLFDVKADIPRNFDGIPTVMNLRATFYNFKNDREAQDIENLWSLFEIALLYSSDKSEDNENNFKRKFNQVMAQPGIGMGKLTSGLFWIDSDTFANLDSRAIWYIFEESEISTKYINFEVNLKKSLTATTYLMMIEKLKLFLKDDNYLNDFIDLSYEAWRKSKEIKQSSKVKDIDADKDLEVVNYWIYSPKPQDVDFASFIENGEMSIGYNELEDFSNYASKEEINQKLQQLNHNQHHYIHTVNAIWEFSKEMKRGDIVYVKKGQTDIVGWGVVSSNHQYKNHKNIIQLVWKEKGNWKIPSKTLNKTLTKITPYSETIRKFNELFSVEHSDGLVATQTTYPVYTAEQFLDDVFMNEEDYDTLVQLIRRKKNVILQGPPGVGKTYAAKRLAYSMMGVKDKERVKLVQFHQSYAYEDFVMGYRPTETGFELRTGAFYNFCKQAEEDSEKDYFFIIDEINRGNLSKIFGELFMLIENDKRGMEIELLYADEKFCVPDNVYIIGMMNTADRSLAILDYALRRRFAFFDMKPAFETIQFKQYQENLKNPQFEALIDAIEALNVDIREDDMLGEGFVIGHSYFSNIVNITESELSNIIEFEIIPLLKEYWFDDSSKVDIWKVRLRDAIQ persistent 706 AAA family ATPase WP_037541667.1 UPI000450C735 UniRef100_A0A3S7GVB6,UniRef50_A0A3S7GVB6,UniRef90_A0A3S7GVB6 . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka gene 4786 6144 . - . GCA_005502385.1_00931_gene GCA_005502385.1_00931 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MKQKLTFKENLFIGSMLFGLFFGAGNLIFPLHLGQMAGANVLLANLGFLITAIGLPFLGIIAIGISKTNGVFEISSRVSKIYAYIFTIGLYLVIGPFFALPRLATTSYEIAFSPFVSPSSGKWILPVFSILFFIVAWFFARKPSKILDYIGKFLNPVFLILLGIVVVLVFIHPMGGISHAPISPDYNKSVLLKGFIDGYNTLDALASLAFGIIIVTTIKKLGITNPNDIAKETVKSGAISIIGMGVIYTLLAVMGTMSLGEFKVSENGGIALAQIAQHYLGDFGIIVLSLIIIVACLKTAIGLITAFSETFTELFPKTNYIVLATIVSVLAFIFANVGLTKIIMYSLPVLMFIYPLAITLILLTLVSHLFNNSPIVYRFTTLFTVIAAFFDGIKASPEPFVKTNFAQSLIGFAENYLPFFDIGMGWIVPALIGFIIGLIVYKFRGNKHEVQA . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka mRNA 4786 6144 . - . GCA_005502385.1_00931_mRNA GCA_005502385.1_00931 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MKQKLTFKENLFIGSMLFGLFFGAGNLIFPLHLGQMAGANVLLANLGFLITAIGLPFLGIIAIGISKTNGVFEISSRVSKIYAYIFTIGLYLVIGPFFALPRLATTSYEIAFSPFVSPSSGKWILPVFSILFFIVAWFFARKPSKILDYIGKFLNPVFLILLGIVVVLVFIHPMGGISHAPISPDYNKSVLLKGFIDGYNTLDALASLAFGIIIVTTIKKLGITNPNDIAKETVKSGAISIIGMGVIYTLLAVMGTMSLGEFKVSENGGIALAQIAQHYLGDFGIIVLSLIIIVACLKTAIGLITAFSETFTELFPKTNYIVLATIVSVLAFIFANVGLTKIIMYSLPVLMFIYPLAITLILLTLVSHLFNNSPIVYRFTTLFTVIAAFFDGIKASPEPFVKTNFAQSLIGFAENYLPFFDIGMGWIVPALIGFIIGLIVYKFRGNKHEVQA . . . . . . . GCA_005502385.1|SCOV01000021.1 Prodigal:002006 CDS 4786 6144 . - 0 GCA_005502385.1_00931 GCA_005502385.1_00931_gene,GCA_005502385.1_00931_mRNA GCA_005502385.1_00931 Branched-chain amino acid transport system 2 carrier protein GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MKQKLTFKENLFIGSMLFGLFFGAGNLIFPLHLGQMAGANVLLANLGFLITAIGLPFLGIIAIGISKTNGVFEISSRVSKIYAYIFTIGLYLVIGPFFALPRLATTSYEIAFSPFVSPSSGKWILPVFSILFFIVAWFFARKPSKILDYIGKFLNPVFLILLGIVVVLVFIHPMGGISHAPISPDYNKSVLLKGFIDGYNTLDALASLAFGIIIVTTIKKLGITNPNDIAKETVKSGAISIIGMGVIYTLLAVMGTMSLGEFKVSENGGIALAQIAQHYLGDFGIIVLSLIIIVACLKTAIGLITAFSETFTELFPKTNYIVLATIVSVLAFIFANVGLTKIIMYSLPVLMFIYPLAITLILLTLVSHLFNNSPIVYRFTTLFTVIAAFFDGIKASPEPFVKTNFAQSLIGFAENYLPFFDIGMGWIVPALIGFIIGLIVYKFRGNKHEVQA persistent 452 brnQ branched-chain amino acid transport system II carrier protein GO:0015658,GO:0015803,GO:0016020 WP_079335344.1 UPI0009A2F59E UniRef100_UPI0009A2F59E,UniRef50_A0A133CF62,UniRef90_A0A6N0I2P3 . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka gene 6359 6583 . - . GCA_005502385.1_00932_gene GCA_005502385.1_00932 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MNIYRLRYQHHKDIVDDNILTVFVLAKNEEDVRKFAKTVNYKVEDVKHTTYEAYEEAKAKGETYRLEHADTYIS . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka mRNA 6359 6583 . - . GCA_005502385.1_00932_mRNA GCA_005502385.1_00932 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MNIYRLRYQHHKDIVDDNILTVFVLAKNEEDVRKFAKTVNYKVEDVKHTTYEAYEEAKAKGETYRLEHADTYIS . . . . . . . GCA_005502385.1|SCOV01000021.1 Prodigal:002006 CDS 6359 6583 . - 0 GCA_005502385.1_00932 GCA_005502385.1_00932_gene,GCA_005502385.1_00932_mRNA GCA_005502385.1_00932 hypothetical protein GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MNIYRLRYQHHKDIVDDNILTVFVLAKNEEDVRKFAKTVNYKVEDVKHTTYEAYEEAKAKGETYRLEHADTYIS persistent 74 DUF1447 domain-containing protein WP_002449204.1 UPI00019FC8D8 UniRef100_A0A1J6DV39,UniRef50_A0A1J6DV39,UniRef90_A0A1J6DV39 . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka gene 6769 7761 . - . GCA_005502385.1_00933_gene GCA_005502385.1_00933 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MIKKSLMLVFISILTLSLVACGTSNSGSDKDKKSENNEKLEVKTTVYPLKSFAQQIGGKYVHVESVYPNGMDPHTYEPSQKQMVDIGKSDLFVYTGDNLDPVAKKIANAVNDKNKTLSLESSLNKADLLKGEEDEHEHGEHEEHGEHEEHEHHHGKYDPHVWLDPVLSQQFAKDIKDEFVKKDAKHKDDYEKNYKKLVSDLKDLDKDMKRAVKGQEGKTVYISHDSIGYLADRYGFKQEGIENMNAEEPSQKDLTTIVKQIKEDKVNYILAEENVSNKVADTVRKETHAKTISFYNMGSHTKQQDNDSNTYQSFMKKNIKAIEKALKNES . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka mRNA 6769 7761 . - . GCA_005502385.1_00933_mRNA GCA_005502385.1_00933 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MIKKSLMLVFISILTLSLVACGTSNSGSDKDKKSENNEKLEVKTTVYPLKSFAQQIGGKYVHVESVYPNGMDPHTYEPSQKQMVDIGKSDLFVYTGDNLDPVAKKIANAVNDKNKTLSLESSLNKADLLKGEEDEHEHGEHEEHGEHEEHEHHHGKYDPHVWLDPVLSQQFAKDIKDEFVKKDAKHKDDYEKNYKKLVSDLKDLDKDMKRAVKGQEGKTVYISHDSIGYLADRYGFKQEGIENMNAEEPSQKDLTTIVKQIKEDKVNYILAEENVSNKVADTVRKETHAKTISFYNMGSHTKQQDNDSNTYQSFMKKNIKAIEKALKNES . . . . . . . GCA_005502385.1|SCOV01000021.1 Prodigal:002006 CDS 6769 7761 . - 0 GCA_005502385.1_00933 GCA_005502385.1_00933_gene,GCA_005502385.1_00933_mRNA GCA_005502385.1_00933 High-affinity zinc uptake system binding-protein ZnuA GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MIKKSLMLVFISILTLSLVACGTSNSGSDKDKKSENNEKLEVKTTVYPLKSFAQQIGGKYVHVESVYPNGMDPHTYEPSQKQMVDIGKSDLFVYTGDNLDPVAKKIANAVNDKNKTLSLESSLNKADLLKGEEDEHEHGEHEEHGEHEEHEHHHGKYDPHVWLDPVLSQQFAKDIKDEFVKKDAKHKDDYEKNYKKLVSDLKDLDKDMKRAVKGQEGKTVYISHDSIGYLADRYGFKQEGIENMNAEEPSQKDLTTIVKQIKEDKVNYILAEENVSNKVADTVRKETHAKTISFYNMGSHTKQQDNDSNTYQSFMKKNIKAIEKALKNES persistent 330 ABC transporter substrate-binding protein WP_017174727.1 UPI0002D76B81 UniRef100_A0A3S7GYT7,UniRef50_B9DL09,UniRef90_A0A974KX41 . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka gene 8237 8875 . + . GCA_005502385.1_00934_gene GCA_005502385.1_00934 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MSAREWRLIVISILLLICWSTEKVLHPIDSASVTLIALGMMLMPKIGVITWKGVEKKIPWGTIIVFGVGISLGNVLLKTGATQWLSDKTFGLMGLKGLPIIATIALITLFNILIHLGFASATSLSSALIPVFISLNSTLGLGDHSIGFVLIQQFVISFGFLLPVSAPQNMLAYGTDTFTVKDFLKSGIPLTIIGYILVILFSLTYWKWLGLV . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka mRNA 8237 8875 . + . GCA_005502385.1_00934_mRNA GCA_005502385.1_00934 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MSAREWRLIVISILLLICWSTEKVLHPIDSASVTLIALGMMLMPKIGVITWKGVEKKIPWGTIIVFGVGISLGNVLLKTGATQWLSDKTFGLMGLKGLPIIATIALITLFNILIHLGFASATSLSSALIPVFISLNSTLGLGDHSIGFVLIQQFVISFGFLLPVSAPQNMLAYGTDTFTVKDFLKSGIPLTIIGYILVILFSLTYWKWLGLV . . . . . . . GCA_005502385.1|SCOV01000021.1 Prodigal:002006 CDS 8237 8875 . + 0 GCA_005502385.1_00934 GCA_005502385.1_00934_gene,GCA_005502385.1_00934_mRNA GCA_005502385.1_00934 hypothetical protein GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MSAREWRLIVISILLLICWSTEKVLHPIDSASVTLIALGMMLMPKIGVITWKGVEKKIPWGTIIVFGVGISLGNVLLKTGATQWLSDKTFGLMGLKGLPIIATIALITLFNILIHLGFASATSLSSALIPVFISLNSTLGLGDHSIGFVLIQQFVISFGFLLPVSAPQNMLAYGTDTFTVKDFLKSGIPLTIIGYILVILFSLTYWKWLGLV persistent 212 SLC13 family permease UniRef50_UPI0030D873A6,UniRef90_UPI0030D873A6 . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka gene 8915 9313 . + . GCA_005502385.1_00935_gene GCA_005502385.1_00935 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MTKKTIYFICTGNSCRSQMAEGFGKAILGDEWNVYSGGIETHGVNPKAVKAMKEVGIDISTHTSDLIDDTILKQSDLVVTLCSHADAHCPTIPSGVKKEHWSFDDPAGKNWSEFQRVRDDIKNAIEQFKYRT . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka mRNA 8915 9313 . + . GCA_005502385.1_00935_mRNA GCA_005502385.1_00935 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MTKKTIYFICTGNSCRSQMAEGFGKAILGDEWNVYSGGIETHGVNPKAVKAMKEVGIDISTHTSDLIDDTILKQSDLVVTLCSHADAHCPTIPSGVKKEHWSFDDPAGKNWSEFQRVRDDIKNAIEQFKYRT . . . . . . . GCA_005502385.1|SCOV01000021.1 Prodigal:002006 CDS 8915 9313 . + 0 GCA_005502385.1_00935 GCA_005502385.1_00935_gene,GCA_005502385.1_00935_mRNA GCA_005502385.1_00935 Arsenate reductase GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MTKKTIYFICTGNSCRSQMAEGFGKAILGDEWNVYSGGIETHGVNPKAVKAMKEVGIDISTHTSDLIDDTILKQSDLVVTLCSHADAHCPTIPSGVKKEHWSFDDPAGKNWSEFQRVRDDIKNAIEQFKYRT persistent 132 arsC arsenate reductase (thioredoxin) 1.20.4.4 GO:0004725,GO:0030612,GO:0046685 UniRef50_Q49WS7,UniRef90_A0A3S7GUS2 . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka gene 9374 9574 . - . GCA_005502385.1_00936_gene GCA_005502385.1_00936 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MWVKDFYYDGNEYINKTVWEYMCKDNVTFDKAIEVLNLNYKDAVANERDIPNLDIERKSIVTSDFW . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka mRNA 9374 9574 . - . GCA_005502385.1_00936_mRNA GCA_005502385.1_00936 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MWVKDFYYDGNEYINKTVWEYMCKDNVTFDKAIEVLNLNYKDAVANERDIPNLDIERKSIVTSDFW . . . . . . . GCA_005502385.1|SCOV01000021.1 Prodigal:002006 CDS 9374 9574 . - 0 GCA_005502385.1_00936 GCA_005502385.1_00936_gene,GCA_005502385.1_00936_mRNA GCA_005502385.1_00936 hypothetical protein GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MWVKDFYYDGNEYINKTVWEYMCKDNVTFDKAIEVLNLNYKDAVANERDIPNLDIERKSIVTSDFW persistent 66 xkdX XkdX family protein WP_017174724.1 UPI000312451A UniRef100_A0A3S7GZD6,UniRef50_A0A6N0I2M6,UniRef90_A0A6N0I2M6 . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka gene 9769 10647 . - . GCA_005502385.1_00937_gene GCA_005502385.1_00937 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MNQMKQLFIKFVEPLTKIEFYQSLLANILIIIAYILLGMIVIAISRKVVTKFFKVNEKKKTRYKIKRSETLSTLVQNLISYVVWFIVLTSVLSRFGISVSAILAGAGVVGLAVGFGAQTVVKDIITGFFVIFEGQFDVSDYVQINSSGVTIAEGTVQTIGLRSTRIQSDTGEVYTLPNGTISEIVNYSKTDVSPLIAIPISPNEDYDVIEKELKAFLPTLKDKYDMFVAAPDLLGLDSIDGNEMVIKLLAHVKPGMHFPGQRLLRKEIISYFNDVGIHTPKPTLVKLEDEEK . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka mRNA 9769 10647 . - . GCA_005502385.1_00937_mRNA GCA_005502385.1_00937 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MNQMKQLFIKFVEPLTKIEFYQSLLANILIIIAYILLGMIVIAISRKVVTKFFKVNEKKKTRYKIKRSETLSTLVQNLISYVVWFIVLTSVLSRFGISVSAILAGAGVVGLAVGFGAQTVVKDIITGFFVIFEGQFDVSDYVQINSSGVTIAEGTVQTIGLRSTRIQSDTGEVYTLPNGTISEIVNYSKTDVSPLIAIPISPNEDYDVIEKELKAFLPTLKDKYDMFVAAPDLLGLDSIDGNEMVIKLLAHVKPGMHFPGQRLLRKEIISYFNDVGIHTPKPTLVKLEDEEK . . . . . . . GCA_005502385.1|SCOV01000021.1 Prodigal:002006 CDS 9769 10647 . - 0 GCA_005502385.1_00937 GCA_005502385.1_00937_gene,GCA_005502385.1_00937_mRNA GCA_005502385.1_00937 Small-conductance mechanosensitive channel GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MNQMKQLFIKFVEPLTKIEFYQSLLANILIIIAYILLGMIVIAISRKVVTKFFKVNEKKKTRYKIKRSETLSTLVQNLISYVVWFIVLTSVLSRFGISVSAILAGAGVVGLAVGFGAQTVVKDIITGFFVIFEGQFDVSDYVQINSSGVTIAEGTVQTIGLRSTRIQSDTGEVYTLPNGTISEIVNYSKTDVSPLIAIPISPNEDYDVIEKELKAFLPTLKDKYDMFVAAPDLLGLDSIDGNEMVIKLLAHVKPGMHFPGQRLLRKEIISYFNDVGIHTPKPTLVKLEDEEK persistent 292 mscS Mechanosensitive ion channel protein MscS UniRef50_Q5HKC7,UniRef90_A0AAE5JKD7 . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka gene 10835 11347 . - . GCA_005502385.1_00938_gene GCA_005502385.1_00938 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MLSYKNILIAVDGSNEAEWAFNKAVEVAKRNDAKLTIVHVIDTRTYTAYEVYASQFDPSKEYSEKLLEGYKELAVKEGVTNVETRLELGPPKLLIPKNLANELNVDLIMCGASGLNAVERFMIGSVSEAIVRHAPCDVLVVRTEEIPEDFESKVATPEFRRRYFESSEHK . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka mRNA 10835 11347 . - . GCA_005502385.1_00938_mRNA GCA_005502385.1_00938 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MLSYKNILIAVDGSNEAEWAFNKAVEVAKRNDAKLTIVHVIDTRTYTAYEVYASQFDPSKEYSEKLLEGYKELAVKEGVTNVETRLELGPPKLLIPKNLANELNVDLIMCGASGLNAVERFMIGSVSEAIVRHAPCDVLVVRTEEIPEDFESKVATPEFRRRYFESSEHK . . . . . . . GCA_005502385.1|SCOV01000021.1 Prodigal:002006 CDS 10835 11347 . - 0 GCA_005502385.1_00938 GCA_005502385.1_00938_gene,GCA_005502385.1_00938_mRNA GCA_005502385.1_00938 Putative universal stress protein GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MLSYKNILIAVDGSNEAEWAFNKAVEVAKRNDAKLTIVHVIDTRTYTAYEVYASQFDPSKEYSEKLLEGYKELAVKEGVTNVETRLELGPPKLLIPKNLANELNVDLIMCGASGLNAVERFMIGSVSEAIVRHAPCDVLVVRTEEIPEDFESKVATPEFRRRYFESSEHK persistent 170 Universal stress protein WP_070468486.1 UPI0008A4FD47 UniRef100_UPI0008A4FD47,UniRef50_Q2FXL6,UniRef90_A0A8X8GKG5 . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka gene 11712 12044 . + . GCA_005502385.1_00939_gene GCA_005502385.1_00939 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MPNENYRESDILGGISYLSVFFAPVLFPLIVWIVAQPPASTHARNALFNHIMSWVMVVLGVVTLSISPAFVNSEHGIGWIIAILIAVIFFIWALVLFLKNIIRGIKLMMS . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka mRNA 11712 12044 . + . GCA_005502385.1_00939_mRNA GCA_005502385.1_00939 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MPNENYRESDILGGISYLSVFFAPVLFPLIVWIVAQPPASTHARNALFNHIMSWVMVVLGVVTLSISPAFVNSEHGIGWIIAILIAVIFFIWALVLFLKNIIRGIKLMMS . . . . . . . GCA_005502385.1|SCOV01000021.1 Prodigal:002006 CDS 11712 12044 . + 0 GCA_005502385.1_00939 GCA_005502385.1_00939_gene,GCA_005502385.1_00939_mRNA GCA_005502385.1_00939 hypothetical protein GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MPNENYRESDILGGISYLSVFFAPVLFPLIVWIVAQPPASTHARNALFNHIMSWVMVVLGVVTLSISPAFVNSEHGIGWIIAILIAVIFFIWALVLFLKNIIRGIKLMMS persistent 110 DUF4870 domain-containing protein WP_061815554.1 UPI00076573B0 UniRef100_UPI00076573B0,UniRef50_Q5HKR9,UniRef90_A0A6N0I2I6 . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka gene 12262 13461 . - . GCA_005502385.1_00940_gene GCA_005502385.1_00940 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MSKIPVTVLSGYLGSGKTTLLNHILNHREGRRIAVIVNDMSEVNIDKDLVADGGGLSRTDEKLVELSNGCICCTLRDDLLKEVERLVHKGNIDYIVIESTGISEPVPVAQTFSYIDEAMGIDLTSICRLDTMVTVVDANRFVNDIHSEDLLVDRNQGADVTDERSIADLLIDQVEFCDVLVLNKTDLVTNEALDKLEHILRTLQPDAKIIKTTQSQVDINDVLDTGRFDFEKASNSAGWIKELTEGGHEAHTPETEEYGMSSFVYSRRLPFHAKRFNDWLEQMPQNIVRSKGIVWLAQYNEVACLLSQAGSSCNISPVTYWVASMPKEKREEILAQRRDVAESWDIEYGDRKTQFVIIGTDLDQEKIEKELDECLLNSSEINSDWHQLEDSYHWKIRKP . . . . . . . GCA_005502385.1|SCOV01000021.1 prokka mRNA 12262 13461 . - . GCA_005502385.1_00940_mRNA GCA_005502385.1_00940 GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MSKIPVTVLSGYLGSGKTTLLNHILNHREGRRIAVIVNDMSEVNIDKDLVADGGGLSRTDEKLVELSNGCICCTLRDDLLKEVERLVHKGNIDYIVIESTGISEPVPVAQTFSYIDEAMGIDLTSICRLDTMVTVVDANRFVNDIHSEDLLVDRNQGADVTDERSIADLLIDQVEFCDVLVLNKTDLVTNEALDKLEHILRTLQPDAKIIKTTQSQVDINDVLDTGRFDFEKASNSAGWIKELTEGGHEAHTPETEEYGMSSFVYSRRLPFHAKRFNDWLEQMPQNIVRSKGIVWLAQYNEVACLLSQAGSSCNISPVTYWVASMPKEKREEILAQRRDVAESWDIEYGDRKTQFVIIGTDLDQEKIEKELDECLLNSSEINSDWHQLEDSYHWKIRKP . . . . . . . GCA_005502385.1|SCOV01000021.1 Prodigal:002006 CDS 12262 13461 . - 0 GCA_005502385.1_00940 GCA_005502385.1_00940_gene,GCA_005502385.1_00940_mRNA GCA_005502385.1_00940 Putative metal chaperone YciC GCA_005502385.1 SCOV01000021.1 GCA_005502385.1|SCOV01000021.1 GCA_005502385.1_SCOV01000021.1 MSKIPVTVLSGYLGSGKTTLLNHILNHREGRRIAVIVNDMSEVNIDKDLVADGGGLSRTDEKLVELSNGCICCTLRDDLLKEVERLVHKGNIDYIVIESTGISEPVPVAQTFSYIDEAMGIDLTSICRLDTMVTVVDANRFVNDIHSEDLLVDRNQGADVTDERSIADLLIDQVEFCDVLVLNKTDLVTNEALDKLEHILRTLQPDAKIIKTTQSQVDINDVLDTGRFDFEKASNSAGWIKELTEGGHEAHTPETEEYGMSSFVYSRRLPFHAKRFNDWLEQMPQNIVRSKGIVWLAQYNEVACLLSQAGSSCNISPVTYWVASMPKEKREEILAQRRDVAESWDIEYGDRKTQFVIIGTDLDQEKIEKELDECLLNSSEINSDWHQLEDSYHWKIRKP persistent 399 GTP-binding protein UniRef50_C0ZJT8,UniRef90_A0A6N0I2J3 . . . . . . . GCA_005502385.1|SCOV01000022.1 prokka gene 1268 2146 . - . GCA_005502385.1_00941_gene GCA_005502385.1_00941 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MTEFDLSTREGRWKHFGSVDPIKGTKPTTKNEMTDLQSTHKNFLFEIEEVGIKNLVYPVKIDQFQTAGTFSFSTSLNKDEKGINMSRILESVEKHYNNGLELDFDTLYQVLRTLQDNMKQNAAGVDVSGKWFFDRYSPVTHIKAVGSANVTYGLAIHKDQVTRKELTITATVTTLCPCSKEISEYSAHNQRGVVTVKVYLDKNSEMIDDYKEKILDAMEANASSILYPILKRPDEKRVTERAYENPRFVEDLIRLIAADLVDFDWIDGFDIECRNEESIHQHDAFARLKYRK . . . . . . . GCA_005502385.1|SCOV01000022.1 prokka mRNA 1268 2146 . - . GCA_005502385.1_00941_mRNA GCA_005502385.1_00941 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MTEFDLSTREGRWKHFGSVDPIKGTKPTTKNEMTDLQSTHKNFLFEIEEVGIKNLVYPVKIDQFQTAGTFSFSTSLNKDEKGINMSRILESVEKHYNNGLELDFDTLYQVLRTLQDNMKQNAAGVDVSGKWFFDRYSPVTHIKAVGSANVTYGLAIHKDQVTRKELTITATVTTLCPCSKEISEYSAHNQRGVVTVKVYLDKNSEMIDDYKEKILDAMEANASSILYPILKRPDEKRVTERAYENPRFVEDLIRLIAADLVDFDWIDGFDIECRNEESIHQHDAFARLKYRK . . . . . . . GCA_005502385.1|SCOV01000022.1 Prodigal:002006 CDS 1268 2146 . - 0 GCA_005502385.1_00941 GCA_005502385.1_00941_gene,GCA_005502385.1_00941_mRNA GCA_005502385.1_00941 GTP cyclohydrolase FolE2 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MTEFDLSTREGRWKHFGSVDPIKGTKPTTKNEMTDLQSTHKNFLFEIEEVGIKNLVYPVKIDQFQTAGTFSFSTSLNKDEKGINMSRILESVEKHYNNGLELDFDTLYQVLRTLQDNMKQNAAGVDVSGKWFFDRYSPVTHIKAVGSANVTYGLAIHKDQVTRKELTITATVTTLCPCSKEISEYSAHNQRGVVTVKVYLDKNSEMIDDYKEKILDAMEANASSILYPILKRPDEKRVTERAYENPRFVEDLIRLIAADLVDFDWIDGFDIECRNEESIHQHDAFARLKYRK persistent 292 folE2 GTP cyclohydrolase FolE2 3.5.4.16 GO:0003933,GO:0003934,GO:0046654 COG1469,H WP_049415310.1 UPI00066DAAF1 UniRef100_UPI00066DAAF1,UniRef50_Q2G0L1,UniRef90_Q4L3P5 . . . . . . . GCA_005502385.1|SCOV01000022.1 prokka gene 2174 2839 . - . GCA_005502385.1_00942_gene GCA_005502385.1_00942 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MKDERHVLMIFPHPDDETFSSAGTIASYIENGVPVTYACLTLGQMGRNLGNPPFATRESLPYIREKELEDAMKVIGITDLRKMGLRDKTVEFEPHEQMDDMVKTLIEETNPSVIISFYPKFAVHPDHEATAEAVVRTVGRMPKEERPRLQLVAFSNDAPDILGEPDILNDISQYKEIKLKAFEAHKSQTGPFLKQLASPEVGGETQSFLEVEPYWTYHFDN . . . . . . . GCA_005502385.1|SCOV01000022.1 prokka mRNA 2174 2839 . - . GCA_005502385.1_00942_mRNA GCA_005502385.1_00942 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MKDERHVLMIFPHPDDETFSSAGTIASYIENGVPVTYACLTLGQMGRNLGNPPFATRESLPYIREKELEDAMKVIGITDLRKMGLRDKTVEFEPHEQMDDMVKTLIEETNPSVIISFYPKFAVHPDHEATAEAVVRTVGRMPKEERPRLQLVAFSNDAPDILGEPDILNDISQYKEIKLKAFEAHKSQTGPFLKQLASPEVGGETQSFLEVEPYWTYHFDN . . . . . . . GCA_005502385.1|SCOV01000022.1 Prodigal:002006 CDS 2174 2839 . - 0 GCA_005502385.1_00942 GCA_005502385.1_00942_gene,GCA_005502385.1_00942_mRNA GCA_005502385.1_00942 putative N-acetyl-alpha-D-glucosaminyl L-malate deacetylase 2 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MKDERHVLMIFPHPDDETFSSAGTIASYIENGVPVTYACLTLGQMGRNLGNPPFATRESLPYIREKELEDAMKVIGITDLRKMGLRDKTVEFEPHEQMDDMVKTLIEETNPSVIISFYPKFAVHPDHEATAEAVVRTVGRMPKEERPRLQLVAFSNDAPDILGEPDILNDISQYKEIKLKAFEAHKSQTGPFLKQLASPEVGGETQSFLEVEPYWTYHFDN persistent 221 bshB2 bacillithiol biosynthesis deacetylase BshB2 3.5.1.- GO:0019213 COG2120,G WP_049382087.1 UPI00066BBE56 UniRef100_A0AAE5JMA6,UniRef50_A0A8J4SJ37,UniRef90_Q4L3P6 . . . . . . . GCA_005502385.1|SCOV01000022.1 prokka gene 2853 3215 . - . GCA_005502385.1_00943_gene GCA_005502385.1_00943 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MLEPIKAEEVQRLLTTFENKPVYLHVETTNGAYANHFDQRVFNAGTFLRNIQVTYEHAQLKGGDKDPFRVGLKLRDGGWVYVQGLTHYEINDNNEFLIAGFNYEGQLAATIEISEQPFTV . . . . . . . GCA_005502385.1|SCOV01000022.1 prokka mRNA 2853 3215 . - . GCA_005502385.1_00943_mRNA GCA_005502385.1_00943 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MLEPIKAEEVQRLLTTFENKPVYLHVETTNGAYANHFDQRVFNAGTFLRNIQVTYEHAQLKGGDKDPFRVGLKLRDGGWVYVQGLTHYEINDNNEFLIAGFNYEGQLAATIEISEQPFTV . . . . . . . GCA_005502385.1|SCOV01000022.1 Prodigal:002006 CDS 2853 3215 . - 0 GCA_005502385.1_00943 GCA_005502385.1_00943_gene,GCA_005502385.1_00943_mRNA GCA_005502385.1_00943 putative protein YojF GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MLEPIKAEEVQRLLTTFENKPVYLHVETTNGAYANHFDQRVFNAGTFLRNIQVTYEHAQLKGGDKDPFRVGLKLRDGGWVYVQGLTHYEINDNNEFLIAGFNYEGQLAATIEISEQPFTV persistent 120 DUF1806 domain-containing protein WP_002488035.1 UPI00024E1ABE UniRef100_A0A8X8GIB5,UniRef50_A0A7U7JT15,UniRef90_A0A2A1K988 . . . . . . . GCA_005502385.1|SCOV01000022.1 prokka gene 3401 4033 . + . GCA_005502385.1_00944_gene GCA_005502385.1_00944 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MELQLAIDLLNKEEAAKLAKKVEEYVDIVEIGTPIVINEGLPAVQHLNENINNAKVLADLKIMDAADYEVSQAIKFGADVVTILGVAEDASIKGAVEEAHKHGKQLLVDMIAVQDLEKRAKELDEMGADYIAVHTGYDLQAEGQSPLESLRTVKSVIKNSKVAVAGGIKPETIKEIVAEEPDLVIVGGGIANADDPVEAAKQCREAIEGK . . . . . . . GCA_005502385.1|SCOV01000022.1 prokka mRNA 3401 4033 . + . GCA_005502385.1_00944_mRNA GCA_005502385.1_00944 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MELQLAIDLLNKEEAAKLAKKVEEYVDIVEIGTPIVINEGLPAVQHLNENINNAKVLADLKIMDAADYEVSQAIKFGADVVTILGVAEDASIKGAVEEAHKHGKQLLVDMIAVQDLEKRAKELDEMGADYIAVHTGYDLQAEGQSPLESLRTVKSVIKNSKVAVAGGIKPETIKEIVAEEPDLVIVGGGIANADDPVEAAKQCREAIEGK . . . . . . . GCA_005502385.1|SCOV01000022.1 Prodigal:002006 CDS 3401 4033 . + 0 GCA_005502385.1_00944 GCA_005502385.1_00944_gene,GCA_005502385.1_00944_mRNA GCA_005502385.1_00944 3-hexulose-6-phosphate synthase GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MELQLAIDLLNKEEAAKLAKKVEEYVDIVEIGTPIVINEGLPAVQHLNENINNAKVLADLKIMDAADYEVSQAIKFGADVVTILGVAEDASIKGAVEEAHKHGKQLLVDMIAVQDLEKRAKELDEMGADYIAVHTGYDLQAEGQSPLESLRTVKSVIKNSKVAVAGGIKPETIKEIVAEEPDLVIVGGGIANADDPVEAAKQCREAIEGK persistent 210 ulaD 3-hexulose-6-phosphate synthase 4.1.2.43 GO:0004590,GO:0006207,GO:0006730,GO:0019647,GO:0019854,GO:0033982,GO:0043801 COG0269,G WP_002455709.1 UPI0001EF553A UniRef100_A0A533IXK2,UniRef50_P42405,UniRef90_Q2G0K7 . . . . . . . GCA_005502385.1|SCOV01000022.1 prokka gene 4035 4583 . + . GCA_005502385.1_00945_gene GCA_005502385.1_00945 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MPTFNNYHLILEEIDNTLSHLEDNDYGRFANEVVGASRIFTAGKGRSGYVANSFAMRLNQLGKDASAIGEATTPSIKEHDLLIIISGSGSTEHLRLLAEKAHSVGAKIALITTKKESKIGDVADTVITLPAGTKHEAEGSEQPLGSLFEQSSHIFLDSVVIGLMDAFNINEEAMQDNHANLE . . . . . . . GCA_005502385.1|SCOV01000022.1 prokka mRNA 4035 4583 . + . GCA_005502385.1_00945_mRNA GCA_005502385.1_00945 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MPTFNNYHLILEEIDNTLSHLEDNDYGRFANEVVGASRIFTAGKGRSGYVANSFAMRLNQLGKDASAIGEATTPSIKEHDLLIIISGSGSTEHLRLLAEKAHSVGAKIALITTKKESKIGDVADTVITLPAGTKHEAEGSEQPLGSLFEQSSHIFLDSVVIGLMDAFNINEEAMQDNHANLE . . . . . . . GCA_005502385.1|SCOV01000022.1 Prodigal:002006 CDS 4035 4583 . + 0 GCA_005502385.1_00945 GCA_005502385.1_00945_gene,GCA_005502385.1_00945_mRNA GCA_005502385.1_00945 3-hexulose-6-phosphate isomerase GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MPTFNNYHLILEEIDNTLSHLEDNDYGRFANEVVGASRIFTAGKGRSGYVANSFAMRLNQLGKDASAIGEATTPSIKEHDLLIIISGSGSTEHLRLLAEKAHSVGAKIALITTKKESKIGDVADTVITLPAGTKHEAEGSEQPLGSLFEQSSHIFLDSVVIGLMDAFNINEEAMQDNHANLE persistent 182 6-phospho-3-hexuloisomerase 5.3.1.27 UniRef50_A0A380G9B8,UniRef90_A0A3S7GU45 . . . . . . . GCA_005502385.1|SCOV01000022.1 prokka gene 4703 6085 . + . GCA_005502385.1_00946_gene GCA_005502385.1_00946 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MLEILNKLNHYSIEQPDMIALSFEEDVLTYQQLYTEIQQLKSVFMYLPKGSRVGLLSKNPLHNMLNYFAILEQGSIPCFLDDQWSEVTIHQLIETYHIDYLVDEQHRLIKTTSSETYPTYLNEQSQVHQLLHIGFTSGTTGLPKAYYRNEPSWLASYKENEKLLRHKENILVAPGPLAHSLSLYTCIYALYTGRTFIGQTRFNASKLVSKMKQQTTNSALFLVPTMLHAITKINHDHLHLTTILSSGAKLSSSLFKRIAETFQHANIIEFFGTSEASFISYNINRKASVDSVGYIFQNVTIGLEGKDKNHIGLLNVKSNMIFSGYVNQSVVLPETWIKTGDYAYIKDNQLYLVSRQNERLIIGGKNVYPQVIEQMIKNIDGVEEAIVIGEPHPRFGEIAVLLYTGSIELEYQTVRQHIMKVLSRYDVPSKFIKVDSMQYTQSGKVARNKMRTAYVKGDFK . . . . . . . GCA_005502385.1|SCOV01000022.1 prokka mRNA 4703 6085 . + . GCA_005502385.1_00946_mRNA GCA_005502385.1_00946 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MLEILNKLNHYSIEQPDMIALSFEEDVLTYQQLYTEIQQLKSVFMYLPKGSRVGLLSKNPLHNMLNYFAILEQGSIPCFLDDQWSEVTIHQLIETYHIDYLVDEQHRLIKTTSSETYPTYLNEQSQVHQLLHIGFTSGTTGLPKAYYRNEPSWLASYKENEKLLRHKENILVAPGPLAHSLSLYTCIYALYTGRTFIGQTRFNASKLVSKMKQQTTNSALFLVPTMLHAITKINHDHLHLTTILSSGAKLSSSLFKRIAETFQHANIIEFFGTSEASFISYNINRKASVDSVGYIFQNVTIGLEGKDKNHIGLLNVKSNMIFSGYVNQSVVLPETWIKTGDYAYIKDNQLYLVSRQNERLIIGGKNVYPQVIEQMIKNIDGVEEAIVIGEPHPRFGEIAVLLYTGSIELEYQTVRQHIMKVLSRYDVPSKFIKVDSMQYTQSGKVARNKMRTAYVKGDFK . . . . . . . GCA_005502385.1|SCOV01000022.1 Prodigal:002006 CDS 4703 6085 . + 0 GCA_005502385.1_00946 GCA_005502385.1_00946_gene,GCA_005502385.1_00946_mRNA GCA_005502385.1_00946 putative acyl--CoA ligase YhfT GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MLEILNKLNHYSIEQPDMIALSFEEDVLTYQQLYTEIQQLKSVFMYLPKGSRVGLLSKNPLHNMLNYFAILEQGSIPCFLDDQWSEVTIHQLIETYHIDYLVDEQHRLIKTTSSETYPTYLNEQSQVHQLLHIGFTSGTTGLPKAYYRNEPSWLASYKENEKLLRHKENILVAPGPLAHSLSLYTCIYALYTGRTFIGQTRFNASKLVSKMKQQTTNSALFLVPTMLHAITKINHDHLHLTTILSSGAKLSSSLFKRIAETFQHANIIEFFGTSEASFISYNINRKASVDSVGYIFQNVTIGLEGKDKNHIGLLNVKSNMIFSGYVNQSVVLPETWIKTGDYAYIKDNQLYLVSRQNERLIIGGKNVYPQVIEQMIKNIDGVEEAIVIGEPHPRFGEIAVLLYTGSIELEYQTVRQHIMKVLSRYDVPSKFIKVDSMQYTQSGKVARNKMRTAYVKGDFK persistent 460 vraA Putative long chain fatty acid-CoA ligase VraA UniRef50_Q4L3Q0,UniRef90_A0A3S7GU34 . . . . . . . GCA_005502385.1|SCOV01000022.1 prokka gene 6082 7230 . + . GCA_005502385.1_00947_gene GCA_005502385.1_00947 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MMNQPVIIWAKRTPFGKYGGKLKHLEPETLLMPLFEEMNSTFPKIIPDIDDVVIGNIVGNGGNIARKALLEAGLAESIPGVTMDRQCGSGLESIIYACRMVQAGAGHIYIAGGVESTSRAPWKIKRPQSVYDTQLPEFYERASFAPKGQDPSMIEAAENVAQYYHITRKQQDAFAIRSHHLTHQYYKNGSISNEIVSLNIKGHLFDKDESIKPTLTEQRLNRLRPLLANGTVTVGNSCMKNDGAALALVMNQETALQYGISEGMMFTDAVTIGVNPKRLGIGPVPAVTKLLKKQNLKISDIDAIELNEAFSSQVLASIQELKLNINQVNQWGGAIASGHPYSASGVALITRLLNMTHWKRGVATMGIGGGMGNAILFERWSL . . . . . . . GCA_005502385.1|SCOV01000022.1 prokka mRNA 6082 7230 . + . GCA_005502385.1_00947_mRNA GCA_005502385.1_00947 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MMNQPVIIWAKRTPFGKYGGKLKHLEPETLLMPLFEEMNSTFPKIIPDIDDVVIGNIVGNGGNIARKALLEAGLAESIPGVTMDRQCGSGLESIIYACRMVQAGAGHIYIAGGVESTSRAPWKIKRPQSVYDTQLPEFYERASFAPKGQDPSMIEAAENVAQYYHITRKQQDAFAIRSHHLTHQYYKNGSISNEIVSLNIKGHLFDKDESIKPTLTEQRLNRLRPLLANGTVTVGNSCMKNDGAALALVMNQETALQYGISEGMMFTDAVTIGVNPKRLGIGPVPAVTKLLKKQNLKISDIDAIELNEAFSSQVLASIQELKLNINQVNQWGGAIASGHPYSASGVALITRLLNMTHWKRGVATMGIGGGMGNAILFERWSL . . . . . . . GCA_005502385.1|SCOV01000022.1 Prodigal:002006 CDS 6082 7230 . + 0 GCA_005502385.1_00947 GCA_005502385.1_00947_gene,GCA_005502385.1_00947_mRNA GCA_005502385.1_00947 3-oxoadipyl-CoA/3-oxo-5%2C6-dehydrosuberyl-CoA thiolase GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MMNQPVIIWAKRTPFGKYGGKLKHLEPETLLMPLFEEMNSTFPKIIPDIDDVVIGNIVGNGGNIARKALLEAGLAESIPGVTMDRQCGSGLESIIYACRMVQAGAGHIYIAGGVESTSRAPWKIKRPQSVYDTQLPEFYERASFAPKGQDPSMIEAAENVAQYYHITRKQQDAFAIRSHHLTHQYYKNGSISNEIVSLNIKGHLFDKDESIKPTLTEQRLNRLRPLLANGTVTVGNSCMKNDGAALALVMNQETALQYGISEGMMFTDAVTIGVNPKRLGIGPVPAVTKLLKKQNLKISDIDAIELNEAFSSQVLASIQELKLNINQVNQWGGAIASGHPYSASGVALITRLLNMTHWKRGVATMGIGGGMGNAILFERWSL persistent 382 vraB Putative acetyl-CoA C-acetyltransferase VraB UniRef50_Q7A2W9,UniRef90_A0A3S7GXX8 . . . . . . . GCA_005502385.1|SCOV01000022.1 prokka gene 7199 7579 . + . GCA_005502385.1_00948_gene GCA_005502385.1_00948 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MRYSSNDGACEKIEIYFNEQEVREYCEVVERTYKGVVPSLMCANVWPKFKLFQKFQQENILLVRTTCEEFEPLKCRLKYEAYLTHKSTKKFKTYIQYIYELKIYKDNRQCIFIRQTFIKKEVNDEV . . . . . . . GCA_005502385.1|SCOV01000022.1 prokka mRNA 7199 7579 . + . GCA_005502385.1_00948_mRNA GCA_005502385.1_00948 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MRYSSNDGACEKIEIYFNEQEVREYCEVVERTYKGVVPSLMCANVWPKFKLFQKFQQENILLVRTTCEEFEPLKCRLKYEAYLTHKSTKKFKTYIQYIYELKIYKDNRQCIFIRQTFIKKEVNDEV . . . . . . . GCA_005502385.1|SCOV01000022.1 Prodigal:002006 CDS 7199 7579 . + 0 GCA_005502385.1_00948 GCA_005502385.1_00948_gene,GCA_005502385.1_00948_mRNA GCA_005502385.1_00948 hypothetical protein GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MRYSSNDGACEKIEIYFNEQEVREYCEVVERTYKGVVPSLMCANVWPKFKLFQKFQQENILLVRTTCEEFEPLKCRLKYEAYLTHKSTKKFKTYIQYIYELKIYKDNRQCIFIRQTFIKKEVNDEV persistent 126 vraC Protein VraC UniRef50_A0A6N0I362,UniRef90_A0A6N0I362 . . . . . . . GCA_005502385.1|SCOV01000022.1 prokka gene 7569 7847 . + . GCA_005502385.1_00949_gene GCA_005502385.1_00949 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MKFSHDKVSHYLRLVNDKNELHSTIVPGQLVVDCVLAYFQIEWTQFNVKYKRTIDIDEEVTFKKVSHNEINVFGLNGEEKIVITKKSNHTDL . . . . . . . GCA_005502385.1|SCOV01000022.1 prokka mRNA 7569 7847 . + . GCA_005502385.1_00949_mRNA GCA_005502385.1_00949 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MKFSHDKVSHYLRLVNDKNELHSTIVPGQLVVDCVLAYFQIEWTQFNVKYKRTIDIDEEVTFKKVSHNEINVFGLNGEEKIVITKKSNHTDL . . . . . . . GCA_005502385.1|SCOV01000022.1 Prodigal:002006 CDS 7569 7847 . + 0 GCA_005502385.1_00949 GCA_005502385.1_00949_gene,GCA_005502385.1_00949_mRNA GCA_005502385.1_00949 hypothetical protein GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MKFSHDKVSHYLRLVNDKNELHSTIVPGQLVVDCVLAYFQIEWTQFNVKYKRTIDIDEEVTFKKVSHNEINVFGLNGEEKIVITKKSNHTDL persistent 92 Phage protein WP_002488040.1 UPI00024E1ABA UniRef100_A0A3S7GTU0,UniRef50_A0A380G2P5,UniRef90_A0A3S7GTU0 . . . . . . . GCA_005502385.1|SCOV01000022.1 prokka gene 8140 8301 . - . GCA_005502385.1_00950_gene GCA_005502385.1_00950 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MIIYKQNIENGIPIYEIITKTFKTITVKFDETFSKNDIYKLLSLLESDVDNMN . . . . . . . GCA_005502385.1|SCOV01000022.1 prokka mRNA 8140 8301 . - . GCA_005502385.1_00950_mRNA GCA_005502385.1_00950 GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MIIYKQNIENGIPIYEIITKTFKTITVKFDETFSKNDIYKLLSLLESDVDNMN . . . . . . . GCA_005502385.1|SCOV01000022.1 Prodigal:002006 CDS 8140 8301 . - 0 GCA_005502385.1_00950 GCA_005502385.1_00950_gene,GCA_005502385.1_00950_mRNA GCA_005502385.1_00950 hypothetical protein GCA_005502385.1 SCOV01000022.1 GCA_005502385.1|SCOV01000022.1 GCA_005502385.1_SCOV01000022.1 MIIYKQNIENGIPIYEIITKTFKTITVKFDETFSKNDIYKLLSLLESDVDNMN persistent 53 vraX Protein VraX WP_017176053.1 UPI0003819278 UniRef100_A0A8X8GIC5,UniRef50_Q5HRG9,UniRef90_A0A8X8GIC5 . . . . . . . GCA_005502385.1|SCOV01000023.1 prokka gene 1196 2140 . - . GCA_005502385.1_00951_gene GCA_005502385.1_00951 GCA_005502385.1 SCOV01000023.1 GCA_005502385.1|SCOV01000023.1 GCA_005502385.1_SCOV01000023.1 MYKNNHANHSNHLENHDLDNFSKTGYSNSRLDAHTVCISDPKLSFDAMTIVGNLNRDNAQALSKFMSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADSWDRRNMRIEFNPNKLTRDEMIWLKQNIISYMEDDGFTRLDLAFDFEDDLSDYYAMSDKAVKKTIFYGRNGKPETKYFGVRDSNRFIRIYNKKQERKDNADAEVMSEHLWRVEIELKRDMVDYWNDCFSDLHILQPDWKTIQRTADRAIVFMLLSDEEEWGKLHRNSRTKYKNLIKEISPVDLTDLMKSTLKANEKQLQKQIDFWQHEFKFWK . . . . . . . GCA_005502385.1|SCOV01000023.1 prokka mRNA 1196 2140 . - . GCA_005502385.1_00951_mRNA GCA_005502385.1_00951 GCA_005502385.1 SCOV01000023.1 GCA_005502385.1|SCOV01000023.1 GCA_005502385.1_SCOV01000023.1 MYKNNHANHSNHLENHDLDNFSKTGYSNSRLDAHTVCISDPKLSFDAMTIVGNLNRDNAQALSKFMSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADSWDRRNMRIEFNPNKLTRDEMIWLKQNIISYMEDDGFTRLDLAFDFEDDLSDYYAMSDKAVKKTIFYGRNGKPETKYFGVRDSNRFIRIYNKKQERKDNADAEVMSEHLWRVEIELKRDMVDYWNDCFSDLHILQPDWKTIQRTADRAIVFMLLSDEEEWGKLHRNSRTKYKNLIKEISPVDLTDLMKSTLKANEKQLQKQIDFWQHEFKFWK . . . . . . . GCA_005502385.1|SCOV01000023.1 Prodigal:002006 CDS 1196 2140 . - 0 GCA_005502385.1_00951 GCA_005502385.1_00951_gene,GCA_005502385.1_00951_mRNA GCA_005502385.1_00951 Replication initiation protein GCA_005502385.1 SCOV01000023.1 GCA_005502385.1|SCOV01000023.1 GCA_005502385.1_SCOV01000023.1 MYKNNHANHSNHLENHDLDNFSKTGYSNSRLDAHTVCISDPKLSFDAMTIVGNLNRDNAQALSKFMSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADSWDRRNMRIEFNPNKLTRDEMIWLKQNIISYMEDDGFTRLDLAFDFEDDLSDYYAMSDKAVKKTIFYGRNGKPETKYFGVRDSNRFIRIYNKKQERKDNADAEVMSEHLWRVEIELKRDMVDYWNDCFSDLHILQPDWKTIQRTADRAIVFMLLSDEEEWGKLHRNSRTKYKNLIKEISPVDLTDLMKSTLKANEKQLQKQIDFWQHEFKFWK shell 314 repC Replication initiation protein GO:0006260 WP_000277654.1 UPI00000AF732 UniRef100_Q57010,UniRef50_P19529,UniRef90_P03064 . . . . . . . GCA_005502385.1|SCOV01000023.1 prokka gene 2235 2329 . + . GCA_005502385.1_00952_gene GCA_005502385.1_00952 GCA_005502385.1 SCOV01000023.1 GCA_005502385.1|SCOV01000023.1 GCA_005502385.1_SCOV01000023.1 . . . . . . . GCA_005502385.1|SCOV01000023.1 prokka mRNA 2235 2329 . + . GCA_005502385.1_00952_mRNA GCA_005502385.1_00952 GCA_005502385.1 SCOV01000023.1 GCA_005502385.1|SCOV01000023.1 GCA_005502385.1_SCOV01000023.1 . . . . . . . GCA_005502385.1|SCOV01000023.1 Infernal:001001 misc_RNA 2235 2329 104.0 + . GCA_005502385.1_00952 GCA_005502385.1_00952_gene,GCA_005502385.1_00952_mRNA GCA_005502385.1_00952 ctRNA_pT181 GCA_005502385.1 SCOV01000023.1 GCA_005502385.1|SCOV01000023.1 GCA_005502385.1_SCOV01000023.1 . . . . . . . GCA_005502385.1|SCOV01000023.1 prokka gene 2667 3908 . - . GCA_005502385.1_00953_gene GCA_005502385.1_00953 GCA_005502385.1 SCOV01000023.1 GCA_005502385.1|SCOV01000023.1 GCA_005502385.1_SCOV01000023.1 MSYSIVRVSKVKSGTNTTGIQKHVQRENNNYENEDIDHSKTYLNYDLVNANKQNFNNLIDEKIEQNYTGKRKIRTDAIKHIDGLITSDNDFFDNQTPEDTKQFFEYAKEFLEQEYGKDNLLYATVHMDEKTPHMHYGVVPITDDGRLSAKEVVGNKKALTAFQDRFNEHVKQRGYDLERGQSRQVTNAKHEQISQYKQKTEYHKQEYERESQKTDHIKQKNDKLMQEYQKSLNTLKKPINVPYEQETEKVGGLFSKEIQETGNVVISQKDFNEFQKQIKAAQDISEDYEYIKSGRALDDKDKEIREKDDLLNKAVERIENADDNFNQLYENAKPLKENIEIALKLLKILLKELERVLGRNTFAERVNKLTEDEPKLNGLAGNLDKKMNPELYSEQEQQQEQQKNQKRDRGMHL . . . . . . . GCA_005502385.1|SCOV01000023.1 prokka mRNA 2667 3908 . - . GCA_005502385.1_00953_mRNA GCA_005502385.1_00953 GCA_005502385.1 SCOV01000023.1 GCA_005502385.1|SCOV01000023.1 GCA_005502385.1_SCOV01000023.1 MSYSIVRVSKVKSGTNTTGIQKHVQRENNNYENEDIDHSKTYLNYDLVNANKQNFNNLIDEKIEQNYTGKRKIRTDAIKHIDGLITSDNDFFDNQTPEDTKQFFEYAKEFLEQEYGKDNLLYATVHMDEKTPHMHYGVVPITDDGRLSAKEVVGNKKALTAFQDRFNEHVKQRGYDLERGQSRQVTNAKHEQISQYKQKTEYHKQEYERESQKTDHIKQKNDKLMQEYQKSLNTLKKPINVPYEQETEKVGGLFSKEIQETGNVVISQKDFNEFQKQIKAAQDISEDYEYIKSGRALDDKDKEIREKDDLLNKAVERIENADDNFNQLYENAKPLKENIEIALKLLKILLKELERVLGRNTFAERVNKLTEDEPKLNGLAGNLDKKMNPELYSEQEQQQEQQKNQKRDRGMHL . . . . . . . GCA_005502385.1|SCOV01000023.1 Prodigal:002006 CDS 2667 3908 . - 0 GCA_005502385.1_00953 GCA_005502385.1_00953_gene,GCA_005502385.1_00953_mRNA GCA_005502385.1_00953 hypothetical protein GCA_005502385.1 SCOV01000023.1 GCA_005502385.1|SCOV01000023.1 GCA_005502385.1_SCOV01000023.1 MSYSIVRVSKVKSGTNTTGIQKHVQRENNNYENEDIDHSKTYLNYDLVNANKQNFNNLIDEKIEQNYTGKRKIRTDAIKHIDGLITSDNDFFDNQTPEDTKQFFEYAKEFLEQEYGKDNLLYATVHMDEKTPHMHYGVVPITDDGRLSAKEVVGNKKALTAFQDRFNEHVKQRGYDLERGQSRQVTNAKHEQISQYKQKTEYHKQEYERESQKTDHIKQKNDKLMQEYQKSLNTLKKPINVPYEQETEKVGGLFSKEIQETGNVVISQKDFNEFQKQIKAAQDISEDYEYIKSGRALDDKDKEIREKDDLLNKAVERIENADDNFNQLYENAKPLKENIEIALKLLKILLKELERVLGRNTFAERVNKLTEDEPKLNGLAGNLDKKMNPELYSEQEQQQEQQKNQKRDRGMHL cloud 413 mobV MobV family relaxase GO:0003677,GO:0006310 WP_000122374.1 UPI00000B73EA UniRef100_Q5DU99,UniRef50_P03864,UniRef90_P03864 . . . . . . . GCA_005502385.1|SCOV01000023.1 prokka gene 4095 4526 . - . GCA_005502385.1_00954_gene GCA_005502385.1_00954 GCA_005502385.1 SCOV01000023.1 GCA_005502385.1|SCOV01000023.1 GCA_005502385.1_SCOV01000023.1 MDRKGSLFVFILGSLSISISFLTIAFFVEFSMWLTTFMFIFVMGGLSFTKTVISKIVSSSLSEEEVASGMSLLNFTSFLSEGTGIAIVGGLLSLQLINRKLVLEFINYSSGVYSNILVAMAILIILCCLLTIIVFKRSEKQFE . . . . . . . GCA_005502385.1|SCOV01000023.1 prokka mRNA 4095 4526 . - . GCA_005502385.1_00954_mRNA GCA_005502385.1_00954 GCA_005502385.1 SCOV01000023.1 GCA_005502385.1|SCOV01000023.1 GCA_005502385.1_SCOV01000023.1 MDRKGSLFVFILGSLSISISFLTIAFFVEFSMWLTTFMFIFVMGGLSFTKTVISKIVSSSLSEEEVASGMSLLNFTSFLSEGTGIAIVGGLLSLQLINRKLVLEFINYSSGVYSNILVAMAILIILCCLLTIIVFKRSEKQFE . . . . . . . GCA_005502385.1|SCOV01000023.1 Prodigal:002006 CDS 4095 4526 . - 0 GCA_005502385.1_00954 GCA_005502385.1_00954_gene,GCA_005502385.1_00954_mRNA GCA_005502385.1_00954 hypothetical protein GCA_005502385.1 SCOV01000023.1 GCA_005502385.1|SCOV01000023.1 GCA_005502385.1_SCOV01000023.1 MDRKGSLFVFILGSLSISISFLTIAFFVEFSMWLTTFMFIFVMGGLSFTKTVISKIVSSSLSEEEVASGMSLLNFTSFLSEGTGIAIVGGLLSLQLINRKLVLEFINYSSGVYSNILVAMAILIILCCLLTIIVFKRSEKQFE cloud 143 MFS transporter UniRef50_A0A433RP66,UniRef90_UPI001654CD8F . . . . . . . GCA_005502385.1|SCOV01000024.1 prokka gene 202 726 . + . GCA_005502385.1_00955_gene GCA_005502385.1_00955 GCA_005502385.1 SCOV01000024.1 GCA_005502385.1|SCOV01000024.1 GCA_005502385.1_SCOV01000024.1 MKLKKSFGTLVMSAVLLSTISPIAGASESIESHKSVSKSNTEIEKDNKVLDDLFQNPKFVTEQTVNNLPSNLKEGTSERVGGSFAVKKGIKAMIKNKKAVFSGVKKISPRAGKSLEKRWDKYVEPALNNILKQEQATWGNVEGQVAQALMGTGIKDSTARSIAYWVSVVGQTLV . . . . . . . GCA_005502385.1|SCOV01000024.1 prokka mRNA 202 726 . + . GCA_005502385.1_00955_mRNA GCA_005502385.1_00955 GCA_005502385.1 SCOV01000024.1 GCA_005502385.1|SCOV01000024.1 GCA_005502385.1_SCOV01000024.1 MKLKKSFGTLVMSAVLLSTISPIAGASESIESHKSVSKSNTEIEKDNKVLDDLFQNPKFVTEQTVNNLPSNLKEGTSERVGGSFAVKKGIKAMIKNKKAVFSGVKKISPRAGKSLEKRWDKYVEPALNNILKQEQATWGNVEGQVAQALMGTGIKDSTARSIAYWVSVVGQTLV . . . . . . . GCA_005502385.1|SCOV01000024.1 Prodigal:002006 CDS 202 726 . + 0 GCA_005502385.1_00955 GCA_005502385.1_00955_gene,GCA_005502385.1_00955_mRNA GCA_005502385.1_00955 hypothetical protein GCA_005502385.1 SCOV01000024.1 GCA_005502385.1|SCOV01000024.1 GCA_005502385.1_SCOV01000024.1 MKLKKSFGTLVMSAVLLSTISPIAGASESIESHKSVSKSNTEIEKDNKVLDDLFQNPKFVTEQTVNNLPSNLKEGTSERVGGSFAVKKGIKAMIKNKKAVFSGVKKISPRAGKSLEKRWDKYVEPALNNILKQEQATWGNVEGQVAQALMGTGIKDSTARSIAYWVSVVGQTLV cloud 174 RxLR effector protein WP_018113541.1 UPI0003822CB6 UniRef100_UPI0003822CB6,UniRef50_A0A9X6AL11,UniRef90_UPI00195C6B39 . . . . . . . GCA_005502385.1|SCOV01000024.1 prokka gene 742 1071 . + . GCA_005502385.1_00956_gene GCA_005502385.1_00956 GCA_005502385.1 SCOV01000024.1 GCA_005502385.1|SCOV01000024.1 GCA_005502385.1_SCOV01000024.1 MNNEELESKLLLIKQSIDALQEELAPNLKTKDLVLLRYGYNVDEIKKLNDYLFKLTMNKNRVTKKEFEEFLCSIRNVPEIPNRQVIDILEGYKNSDLYVDLIDYILNSD . . . . . . . GCA_005502385.1|SCOV01000024.1 prokka mRNA 742 1071 . + . GCA_005502385.1_00956_mRNA GCA_005502385.1_00956 GCA_005502385.1 SCOV01000024.1 GCA_005502385.1|SCOV01000024.1 GCA_005502385.1_SCOV01000024.1 MNNEELESKLLLIKQSIDALQEELAPNLKTKDLVLLRYGYNVDEIKKLNDYLFKLTMNKNRVTKKEFEEFLCSIRNVPEIPNRQVIDILEGYKNSDLYVDLIDYILNSD . . . . . . . GCA_005502385.1|SCOV01000024.1 Prodigal:002006 CDS 742 1071 . + 0 GCA_005502385.1_00956 GCA_005502385.1_00956_gene,GCA_005502385.1_00956_mRNA GCA_005502385.1_00956 hypothetical protein GCA_005502385.1 SCOV01000024.1 GCA_005502385.1|SCOV01000024.1 GCA_005502385.1_SCOV01000024.1 MNNEELESKLLLIKQSIDALQEELAPNLKTKDLVLLRYGYNVDEIKKLNDYLFKLTMNKNRVTKKEFEEFLCSIRNVPEIPNRQVIDILEGYKNSDLYVDLIDYILNSD cloud 109 Phage protein WP_018113542.1 UPI000362DA96 UniRef100_UPI000F5D4BDF,UniRef50_A0A6G4N846,UniRef90_UPI00187A5465 . . . . . . . GCA_005502385.1|SCOV01000024.1 prokka gene 1604 2602 . + . GCA_005502385.1_00957_gene GCA_005502385.1_00957 GCA_005502385.1 SCOV01000024.1 GCA_005502385.1|SCOV01000024.1 GCA_005502385.1_SCOV01000024.1 MQFNTTRYIDENQENKTLKDMTKSGKQRPWREKKIDNVSYADILEILKIKKAFNVKQCGNVLEFKPTDEGYLKLYKTWFCKSKLCPVCNWRRSMKNSYQAQKVIEAVVKEKPKARWLFLTLSTKNAIDGDTLEQSLKHLTESFRRLFKYKKVSKNLIGFMRSTEVTVNKNDGSYNQHMHVLLCVENSYFKNKANYITQEEWINLWQKALQVDYKPVANIKAIKPNKKGDKDIQAAIKETSKYSVKSSDYLTGNHEKDAEIVQDLEQGLYRKRMLSYGGLLKQKHKLLNLDDAEDGNLIQTSDEEKTTEEEQKAHSITAIWNFEKQNYFLKNL . . . . . . . GCA_005502385.1|SCOV01000024.1 prokka mRNA 1604 2602 . + . GCA_005502385.1_00957_mRNA GCA_005502385.1_00957 GCA_005502385.1 SCOV01000024.1 GCA_005502385.1|SCOV01000024.1 GCA_005502385.1_SCOV01000024.1 MQFNTTRYIDENQENKTLKDMTKSGKQRPWREKKIDNVSYADILEILKIKKAFNVKQCGNVLEFKPTDEGYLKLYKTWFCKSKLCPVCNWRRSMKNSYQAQKVIEAVVKEKPKARWLFLTLSTKNAIDGDTLEQSLKHLTESFRRLFKYKKVSKNLIGFMRSTEVTVNKNDGSYNQHMHVLLCVENSYFKNKANYITQEEWINLWQKALQVDYKPVANIKAIKPNKKGDKDIQAAIKETSKYSVKSSDYLTGNHEKDAEIVQDLEQGLYRKRMLSYGGLLKQKHKLLNLDDAEDGNLIQTSDEEKTTEEEQKAHSITAIWNFEKQNYFLKNL . . . . . . . GCA_005502385.1|SCOV01000024.1 Prodigal:002006 CDS 1604 2602 . + 0 GCA_005502385.1_00957 GCA_005502385.1_00957_gene,GCA_005502385.1_00957_mRNA GCA_005502385.1_00957 hypothetical protein GCA_005502385.1 SCOV01000024.1 GCA_005502385.1|SCOV01000024.1 GCA_005502385.1_SCOV01000024.1 MQFNTTRYIDENQENKTLKDMTKSGKQRPWREKKIDNVSYADILEILKIKKAFNVKQCGNVLEFKPTDEGYLKLYKTWFCKSKLCPVCNWRRSMKNSYQAQKVIEAVVKEKPKARWLFLTLSTKNAIDGDTLEQSLKHLTESFRRLFKYKKVSKNLIGFMRSTEVTVNKNDGSYNQHMHVLLCVENSYFKNKANYITQEEWINLWQKALQVDYKPVANIKAIKPNKKGDKDIQAAIKETSKYSVKSSDYLTGNHEKDAEIVQDLEQGLYRKRMLSYGGLLKQKHKLLNLDDAEDGNLIQTSDEEKTTEEEQKAHSITAIWNFEKQNYFLKNL shell 332 Replication protein UniRef50_E4PYC6,UniRef90_K9ATE6 . . . . . . . GCA_005502385.1|SCOV01000025.1 prokka gene 142 2838 . + . GCA_005502385.1_00958_gene GCA_005502385.1_00958 GCA_005502385.1 SCOV01000025.1 GCA_005502385.1|SCOV01000025.1 GCA_005502385.1_SCOV01000025.1 . . . . . . . GCA_005502385.1|SCOV01000025.1 prokka mRNA 142 2838 . + . GCA_005502385.1_00958_mRNA GCA_005502385.1_00958 GCA_005502385.1 SCOV01000025.1 GCA_005502385.1|SCOV01000025.1 GCA_005502385.1_SCOV01000025.1 . . . . . . . GCA_005502385.1|SCOV01000025.1 barrnap:0.9 rRNA 142 2838 0 + . GCA_005502385.1_00958 GCA_005502385.1_00958_gene,GCA_005502385.1_00958_mRNA GCA_005502385.1_00958 23S ribosomal RNA GCA_005502385.1 SCOV01000025.1 GCA_005502385.1|SCOV01000025.1 GCA_005502385.1_SCOV01000025.1 . . . . . . . GCA_005502385.1|SCOV01000028.1 prokka gene 32 1579 . + . GCA_005502385.1_00959_gene GCA_005502385.1_00959 GCA_005502385.1 SCOV01000028.1 GCA_005502385.1|SCOV01000028.1 GCA_005502385.1_SCOV01000028.1 . . . . . . . GCA_005502385.1|SCOV01000028.1 prokka mRNA 32 1579 . + . GCA_005502385.1_00959_mRNA GCA_005502385.1_00959 GCA_005502385.1 SCOV01000028.1 GCA_005502385.1|SCOV01000028.1 GCA_005502385.1_SCOV01000028.1 . . . . . . . GCA_005502385.1|SCOV01000028.1 barrnap:0.9 rRNA 32 1579 0 + . GCA_005502385.1_00959 GCA_005502385.1_00959_gene,GCA_005502385.1_00959_mRNA GCA_005502385.1_00959 16S ribosomal RNA GCA_005502385.1 SCOV01000028.1 GCA_005502385.1|SCOV01000028.1 GCA_005502385.1_SCOV01000028.1 . . . . . . .