core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	2	760	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	3	761	GCA_005888175_1_2_1	GCA_005888175_1_2_1	-	54181	.	CDD:pfam07484	Tail-Collar-Domain	MAGLNETNKWETEIYRIEENDPVHGGEDGITNKPIKQLANRTKYLKTEVEKRYIAQNASTEQTGLVQLDSNTDSDAEDKAATPKAVNVVKALVIAVRNALNNYIPNSKKSNADNSSSSDTIATSYALKKVRDIATKRATDTTAGQTVLSHKTNGTDKSKSASEFALGELNKELAGKGVPLGAVVSFPKGMNPRGYLRAIGGTFNRATYPDLYVANGNSDILPNLHRSDVGMTAYFAVDNIPTGWIAFDSIRTT	common_virus_hmm	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0001	shell	ambiguous	low	198	0.261	GCA_005888175.1_00011
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	792	1361	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	793	1362	GCA_005888175_1_2_2	GCA_005888175_1_2_2	-	54181	.	PFAM:PF09684.9	Tail-protein	MARLRYPDIIARDAKYTALAELGQRLPQFKLSPIMTTLVDLLDDRFIEVLAEKWSVTGYDGLFLATTQESKKGLIKKSVELHRHKGTPWSVREVIRQLGFGEIEIDEGLKNRDYSANTFVNKIPSDERWAYYGIQLSKPVTNEQAVEIRKILRNFVPARCLLGVLDYKSAPVLYNNKVRYNKQYNHGSV*	hallmark_hmm	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0002	shell	direct	high	569	0.998	GCA_005888175.1_00012
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	1354	2460	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	1355	2461	GCA_005888175_1_2_3	GCA_005888175_1_2_3	-	54181	.	CDD:COG3948	baseplate-assembly-protein	MKADDVKIVSEDVKQILADTIADYEKRTGKTLQPAHIERSIIQSYAYRELLVRKGINEAFLNTFPQFAKGLALDLCGEPMGCYRLQDKPARCVLRFSIEATHPLVLIPKGTRVAVDEKLEFITLNDDVITPLITYVEIEAQANIKGPMGNGWEIGRVKTLKSPLMTSLEVKVSNIDVPSGGLVQESDDDYRKRILSAPEAFSTCGSVAAYDYHVRAVSQAIADVNVATPKGGLVRITVLTKEGIPDSRLLNDIKQYVSGEKRRPLCDTVEVKAPTQRDYQITATLKLLDGFREDIVKTKARDALQFYLSDKTKKLGLDVVPSALISALRVEGVYDVTLTSPQKIVVAENEWANCTAISVEVESERTNG*	hallmark_hmm	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0003	shell	direct	high	1106	0.999	GCA_005888175.1_00013
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	2460	2825	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	2461	2826	GCA_005888175_1_2_4	GCA_005888175_1_2_4	-	54181	.	CDD:COG3628	baseplate-assembly-protein	MNTHTHLTTHWQLAPNDEVQSVIQGIDDIHLCIANILNTIKGTDILRPEFGSDHFRYIDQPEDLAVPNFVREITFALQRFEKRIEVDEVKVSGNAPHFTFTIFWSLKEDVYREIYSTEVKG*	common_virus_hmm	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0004	shell	direct	high	365	0.997	GCA_005888175.1_00014
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	2880	3488	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	2881	3489	GCA_005888175_1_2_5	GCA_005888175_1_2_5	-	54181	.	CDD:COG4540	baseplate-assembly-protein	MQTHNFTATYQEGIVSAVDSTKHKVRCKIPALDDLETAWLSYLTPNAGGNQFYCLPDVGELVAIILDARGEGGCVLGAIFNAQDPTPTGDSNIWMKKFSNGTIIKHDRNSGNVEVSAVGEVLIKSPSKVTIDCPATETTGDLMVKGALTYMKGMTGYGGGGATAMINGSLETKGGDIKADNISLKTHKHTEQGDGKDTSIAK*	common_virus_hmm	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0005	shell	direct	high	608	0.998	GCA_005888175.1_00015
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	3475	4539	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	3476	4540	GCA_005888175_1_2_6	GCA_005888175_1_2_6	-	54181	.	PDB:3CDD_F	tail-protein	MSNIAQPDFSLFYEKTNITADIEPHLIELSYTDYLEGQSDELVVQFEDISGKWIRAWFPTQGDKLKGAIGYKGEQLVDIGAFEIDEVEYQYRPSNITLRALSAGVSKNQRTLKPKAYEHTTLAQVIAVVAKRLKLKVVGEIKHIPIARITQYQERDLEFLARLGREYHHSFKVVNDQLVFTAKEKLGESESVLTIEEQDTISISLRDRISSTAKEVNISGYDANGKKVIKKSKKAKAKREDVSQAAKSSEDSLQIVTRGESQEQIDARGEAALAEQNDDQQSGTIKLWGNPKLVAGNTILLRNLGVFSGKYLIKSSRHTIYRNQGYTTTIDVRLLEFIADDLVTQSMEKHNANP*	common_virus_hmm	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0006	shell	direct	high	1064	0.999	GCA_005888175.1_00016
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	4532	4762	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	4533	4763	GCA_005888175_1_2_7	GCA_005888175_1_2_7	-	54181	.	COG5004	P2-like prophage tail protein X  [Mobilome: prophages, transposons]. 	MTQTVLKHIVKQGERWDNLAYHYYGDALEYSRIIDANPHLSFYEVLPTGATVFIPVLQVKPTNNEDMPPWLRGDNE*	mmseqs_cdd	nonviral_gene	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0007	shell	direct	high	230	0.996	GCA_005888175.1_00017
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	4743	5675	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	4744	5676	GCA_005888175_1_2_8	GCA_005888175_1_2_8	-	54181	.	PFAM:PF06995.10	tail-protein	MYLMLGTIALEPIDITDFSEIQAARFAEHQVLKGKPRLQAMGESLAELNLSVRLHHKIGGVERRYQALLAAKAKQDALALIWGRGKFKGNFVITDIHSTTLFTDKYGNVLCRELTINLKEYVGELKNNLLGAALNIGKGSLLGSILPPEFFAGMNAAKEALTKGIDLYNQGKRIVDEVQNTIAIMKQFSQDPATALAYLPSVLGNLDGALGSFSELTGMRELFNGVRSVLPVVSEFSQEVAEIQSGLMAIQSDFQQGSSGSDWSEWFPSANRTMSEVAESFDFLAPRVAEMTAWIVLRNDDEVNNDTDRA*	phrogs_hmm	hypothetical_protein	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0008	shell	direct	high	932	0.999	GCA_005888175.1_00018
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	5675	8266	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	5676	8267	GCA_005888175_1_2_9	GCA_005888175_1_2_9	-	54181	.	PFAM:PF10145.8	minor-tail-protein	MANNLVLGLVIGASLKGSFSAAFGKANKTIENLSNNLGKATQQNEKLGAKMAKWQERQAALHQKMQLAYLSGDQNIGKLTRRYERMQAVIARTAEKQQHFTRAIQSSEKAQRSLSSTLEKQQARKQNRDELKGKLAKSTAITASVALPTWNAVKTYMQQEEAANNLKISMMKADGTFGKFKEIGKIADQLGTDLPGTREDFYKLAKAMKMQGVSDDTLINSGLKTSAKLNVLLEMDQEQGGEFFAKMMESHGLSEAELGASADDLQRAMFAAGMKKDDMYGAMTYYASNVRSMKLTGRENSQKIYAIEGLAAQQGLEGTSFGTNFSTMLDRMSKGPQMIAEAKKGMKAEARDILEKSGVKFNFWDKKGNFKGIDGMVKELEKLQKIRAKFGDQAAQDVADAMFGTEGKRVALLLGEKGTTGLQDFLQKMKDQASIEERVAQKTKTLGSALESLGGAWESAVGNIGSVFADDIKSGAKALQGFVEDTLTPFVSEHKTAIKWIATTVGGFSLLSTGVLATKFAFSGIASIFSAAFMPFKVFKAIKAAKELETLTGTVTKTGRVMKWLGSAFGVVKKAFIGLGKALLTNPIGLTITAIAVAAYLIYDNWEPISAWFANLWTNVTTYFQSFCTWVQGIWNSATEWVSSAWSGVSDYFGQLWNNITTFFNSGIGNITATILNWSPLGLFQQVFSTVLSWFGIDVPAKFTDFGKNMIDGLVNGIRNAWEGAKQIVSDLGDGIKGWFAEKLGIHSPSRVFMGFGENTVQGLAIGINKSLGLAEKASDEMSNAVGIFPHSDYQSLQTTFAQQQSEQAQHGGMTIHFNPTINVNGSSNNQVLNDVKEGLNISLREFETMLARVLDQQKRRAY*	hallmark_hmm	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0009	shell	direct	high	2591	1.0	GCA_005888175.1_00019
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	8312	8626	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	8313	8627	GCA_005888175_1_2_10	GCA_005888175_1_2_10	+	54181	.	.	hypothetical protein	MFDLFKEIIEDWKDYDMVEKAYWSAIGLLFSIGFLAFSWWYWVGMFNATDNFFIAFGVGFILYLVLGAIIALVTAPLMTLLSLSAATITGAIIGLVKFYRQART*	.	hypothetical_protein	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0010	shell	direct	high	314	0.997	GCA_005888175.1_00020
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	8611	8757	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	8612	8758	GCA_005888175_1_2_11	GCA_005888175_1_2_11	-	54181	.	PF06528.12	Phage P2 GpE	METLNNAIADVVWWFGFSAEEINNWTLKELDDWLAQANRQVKAGYVRA*	hhsuite_tools	hypothetical_protein	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0011	shell	direct	high	146	0.993	GCA_005888175.1_00021
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	8741	9025	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	8742	9026	GCA_005888175_1_2_12	GCA_005888175_1_2_12	-	54181	.	PFAM:PF10109.8	tail-protein	MSQKVDAVRTTIKLSSPVQLPDGTTLEELKVREPLVKDFRTASQQGKTNEDREIIVAALCCGLVLEDMDLIKWKDYVQVQRFLFGSDDTDGDVK*	phrogs_hmm	hypothetical_protein	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0012	shell	direct	high	284	0.996	GCA_005888175.1_00022
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	9119	9637	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	9120	9638	GCA_005888175_1_2_13	GCA_005888175_1_2_13	-	54181	.	PDB:5W5E_O	major-tail-protein	MSVAINQIINANVYMDGNSLLGKAKEFKLPDIEFEQIEHKGLGLVGTIKLPSGIAALEGEVTWDSFYPEVRAKAYNPMKNVQLMARSNLQVFDARGLVAEEPMVTIMNVSFSKITGGSLKNKEATEHADTFQVHSIKQTVGGKEIFFYDAFANILRVNGQDVLQKYRTNIGQ*	hallmark_hmm	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0013	shell	direct	high	518	0.998	GCA_005888175.1_00023
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	9648	11033	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	9649	11034	GCA_005888175_1_2_14	GCA_005888175_1_2_14	-	54181	.	PDB:3J9Q_Q	tail-sheath-tube	MAFHHGTETKRVTGGSVAVETVDGAIIGIVGTAPIGPLNELTLCQTKKDFAKFGTILNQGFTLPDAFDVIARYAAGQVYVVNVLDVSKHKSEIQDESITLDETTLLANTQKKGLLSLTLKSNSTPLTLNEDYWVDMQTGEIRLKVSKTSLTATYTYADPSKVTEEDIKGGIESSTGKRKGFELLRDGFNLYGADAKILICPEFDKTASCASALGTLAEQLKAVAYVQLPKGTSLSKAIQGRGPQGTINAKDSTERVRHFFPYALGSSNQLESLAVHAAGLRMKVDVEKGYWHSTSNHQLLGVIGMELPLTARIDDIQSETNRLNAVGITTIFNSFGTGFRLWGNRSSNYPTVTHIINFETALRTGDLIDESIRMVELQYIDRPIDDALIDSLTETVDTYLRALPSIVGYSLGLDYDYDLVDAFSKGQVPIKYDYTPKLPAERITNTSVMTRKYLVNLVSQK*	common_virus_hmm	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0014	shell	direct	high	1385	0.999	GCA_005888175.1_00024
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	11043	11540	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	11044	11541	GCA_005888175_1_2_15	GCA_005888175_1_2_15	-	54181	.	PDB:2GJV_C	tail-completion-protein	MSATQTILNSIQTHLLSQIDRFAIELFPDNPSEYFLRDESGAILIQYAGSKFERINSTDIIQQRRTVTIALTVIARSQHNDDGALAILDQVRLAIVGFRPENCLACALINEEFAGEADGLWQYQLLVQTETWQVEQTKAVDLPKLANVYSRKPTDPLNPILQPKS*	hallmark_hmm	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0015	shell	direct	high	497	0.998	GCA_005888175.1_00025
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	11552	11986	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	11553	11987	GCA_005888175_1_2_16	GCA_005888175_1_2_16	-	54181	.	CDD:cd08053	head-to-tail-adaptor	MYISAQDLTEVLSERSLIELSNDHSRATEYNPLVLDKACQYATETVDGYLRSRYLLPLKSVPTIVRNICLQLARFWLYSRRPEGTGFPENVKDTYAQALKDLERIQSGKLHLGLEELNENGTNALDDVAKFKTRANKKIDLTGY*	hallmark_hmm	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0016	shell	direct	high	434	0.998	GCA_005888175.1_00026
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	11986	12303	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	11987	12304	GCA_005888175_1_2_17	GCA_005888175_1_2_17	-	54181	.	.	hypothetical protein	MNKKMLYAVVGTMAILHNGKRYEKGDKIELTAEEAENLSLYIQLDQSELEKQKEERRLAEEKAEQERLAAEKAQKEAEEKAEKERLVAEKAQKKTEEKTKGKADK*	.	hypothetical_protein	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0017	shell	direct	high	317	0.997	GCA_005888175.1_00027
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	12369	13295	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	12370	13296	GCA_005888175_1_2_18	GCA_005888175_1_2_18	-	54181	.	PFAM:PF03864.14	Major-Capsid-protein	MSDLSKHRVVDPVLTELAQGYYNGNMISEVLFPIAETQKEGGKIPTFGRLAFRLQTTKRELRAASNRLTPEDIGSLTVVLEENDIEYPIDIREVNEGEGVYPLRQYATGVTQDVIVLNREKACADLALNEDNYDASNKITLSGTSQFTDKNSDPISVIKAGIRAIKRATGRKPNVCAISGDVWEVLSEHPKVLEKIKYVATAVLTPEDFAKLVKIDKVIIGEAVYEQSSELKDIWSKAIVLAYVAAASKEKKQNIYEPSYGYTVRRKNGLYVDTYTEVGGKVEIVRTTDINKPYIVGKAAGYLIKGCI*	hallmark_hmm	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0018	shell	direct	high	926	0.999	GCA_005888175.1_00028
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	13314	14417	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	13315	14418	GCA_005888175_1_2_19	GCA_005888175_1_2_19	-	54181	.	PFAM:PF10123.8	head-maturation-protease	MNLIEIFKAGTRKDANGKEVTLTIEDLQQAVQSYNVEFHEAPAVIGHPQHNHPAYAWVKRLELDGDILKAEFDQIDPEFAEMVDKGRFKKVSASFYLANSQANPKQGSLYLRHVGFLGAMPPAVKGLRNPEFAEDEEGVVDFSDWTEATLWRRLRDWFIGKHGQEEADKVLPDYLVGSVQEEAVRNSLQPQKAESPIFNEPTQQQGEPEMSAEEKAELERLKAENQQLKDEKAQAEAQKAEAQLNQTKAENADFAESLVSVGKLAPVSKEKAIELLNCAAVQSAGGVVEFGEGENILTAIKAFLEAQPQIIQFGEVATKDNATTTEDNTVEYAEGTSAEAIDMDKRVRAYMKEHNVSYVTAFNAIHS*	phrogs_hmm	hypothetical_protein	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0019	shell	direct	high	1103	0.999	GCA_005888175.1_00029
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	14660	15160	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	14661	15161	GCA_005888175_1_2_20	GCA_005888175_1_2_20	-	54181	.	PFAM:PF05069.12	virion-morphogenesis-protein	MIKITLNDTQALAKLHSIAQQLQHPRKLYGLLGETLKKIHADRFKAEVAPDGKKWQPLSSITRKIKGNDQILKQGGYLSQKTAYNYDDNRLEFGSDAKYARLHQFGGVIRPKKGKRLKFGKGSNTVYAKQSKIPARPWLGVNAQDEQKLLKKATALLQRQINQNLK*	hallmark_hmm	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0020	shell	direct	high	500	0.998	GCA_005888175.1_00030
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	15224	15421	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	15225	15422	GCA_005888175_1_2_21	GCA_005888175_1_2_21	+	54181	.	.	hypothetical protein	MSNYEDNLLRNIFVAQVATLAKAIKAEKLAQGTRTTSDCYREAIIEIKRNREKILSLLDEIQAHY*	.	hypothetical_protein	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0021	shell	direct	high	197	0.995	GCA_005888175.1_00031
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	15363	15551	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	15364	15552	GCA_005888175_1_2_22	GCA_005888175_1_2_22	-	54181	.	.	hypothetical protein	MTELEERKKALELLPQFQGLTINEIISVLHWLQAYVQDYQRFEISNELVSHQEEIESSHDSV*	.	hypothetical_protein	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0022	shell	direct	high	188	0.995	GCA_005888175.1_00032
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	15738	17015	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	15739	17016	GCA_005888175_1_2_23	GCA_005888175_1_2_23	-	54181	.	PFAM:PF04233.13	minor-capsid-component	MSKFTFQEQSRYFEKKLNLKTNSYLDVLGEEHDYFFVVAGANRNEVINAFREAVDQAIHHGETLESFRQRFDEIVEKTGWDYNGGRNWRTRIIYDTNVYGAYNRGRLQQHLDLADVMPYWEYQHNDNSHPRPEHVALDGTIRPATDQFWKYYYPIKAYGCHCTVIAHDEHDLKAMGKQVSPPVEIEYEDKLVGVRSGSPRLVTLPKGYDVGFAPYNFDDLSSSRNVEIDSILFQKLTTAEPRFASLLIQDVMKNTATVALLNHSMKEMVETVSNEKIARGKMKYVGVIHDEVIDKLTAMDKAPQTAVIAVRDEDVLHALRDTKQAKGINLPIEFWEQLPEKLRNPKAILFQPKESFNDKNAKDTLLFIYDTDHGKVAVKMDYEVKLRDQLTSKKFKANLNVVKTASVIDEDLKKLQQFEVLWGEL*	hallmark_hmm	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0023	shell	direct	high	1277	0.999	GCA_005888175.1_00033
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	17016	18431	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	17017	18432	GCA_005888175_1_2_24	GCA_005888175_1_2_24	-	54181	.	PDB:5NGD_C	Portal-protein	MAKKFDLVKEIAVRSHAIDYFSMGQYLPNPDPVLKKMGRDISAYREVLSDSHVAGCVRRRKAAIKGLEWRITPTGNEKTDEILTALFERLPLPQIITEMLDAALFGYQVLEVMWENQNGLWLPAELIGKPQEWFVFDEQNQLMLRDKENRNGKLVPEKKFLLTTQEANYTNPYGKPDLALCFWAATFKRGGFKFWLEFTEKYGSPWLVGKHPRQAQTHEIEDLLDSLEQMIGTAVAAIPDDSAISMLESASKGGSSQVFDEFLKYCKSEIAIALLGQNQTTEQESNRASATAGLELTKEIRNEDITLVESGFNQLLNWICELNFNVETLPKFELYEQESIDKVQVERDQILSQMGVKFTAQYLHRTYGFEEGDIELTVNNTPKTAEFNEPTLPSNIADGVVEQLEMEGEPYVEDWMQTIKDRLSQAESLEDFRNQLDSLIPELNFAEYGELMAWASTTAFLAGRQSVVEEK*	hallmark_hmm	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0024	shell	direct	high	1415	0.999	GCA_005888175.1_00034
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	18433	19755	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	18434	19756	GCA_005888175_1_2_25	GCA_005888175_1_2_25	-	54181	.	PFAM:PF03354.15	Large-Terminase	MGLTTNTTPRTVLYNYQKRWLQDNSRFKVAMFSRQSGKTFTTTLEIVLDCMACEARGEKTRWVILSRGERQAKEAINEGVKRHLEAVGIACQIMEVPFSPTINALEVIFPNGSKITALPANPDTARGFSANVFLDEFAFHQDSREIWKALFPVISADWKLRVVSTPNGKGNKFYELMTDLNNTEWSRHTVDIYQAVADGLPRNIEQLRKGLNDEDAWAQEFELKWLDEASSWLSYDLIDAVEHHQAGIPELYTGNPCFVGMDIAVRGDLTVIWVIELVGDVYWTREVITLKRVALREQLAELDRVFNQYHVITCYLDQTGMGEKMVEDAQYSHGKRRVQGVLFNVATKLNMATIGKNAFEDRQIRIPQGDTDLREDLHKLKKVTGSNGVPRFIAESDSKGHADRTWACFLALTAAKEGVIMPIKAQSRKPRTSRKMTQGY*	hallmark_hmm	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0025	shell	direct	high	1322	0.999	GCA_005888175.1_00035
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	19739	20287	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	19740	20288	GCA_005888175_1_2_26	GCA_005888175_1_2_26	-	54181	.	pfam11985	Protein of unknown function (DUF3486). This family of proteins is functionally uncharacterized. This protein is found in bacteria and viruses. Proteins in this family are about 190 amino acids in length.	MAPRSSIEQLPEDVRRWLERALTENGFAGYVELEKLLKDKGYSISKSAIHRYGQKIEGRLKAIKESAEIAKLITESVDDDGDSQSDALMRLVQTDLMNILIESRNTEELSVKDKIKLFGNIGKNIAAMTSASVKLKQYQAEHKAKLLAKLDEMAKNAEQEGNDMPTLERVRKGLLETYGLNN*	mmseqs_cdd	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0026	shell	direct	high	548	0.998	GCA_005888175.1_00036
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	20297	20599	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	20298	20600	GCA_005888175_1_2_27	GCA_005888175_1_2_27	-	54181	.	.	hypothetical protein	MMEKARREGMRWQLLNVLHKAMPYTTSEQFLLDVIRGIYPNVTALEIRQQLEYLQDRKLISIDKQPHGVWFADIHRLGVDIVEYTIDCQAGIARPEKYWA*	.	hypothetical_protein	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0027	shell	direct	high	302	0.997	GCA_005888175.1_00037
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	20596	20904	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	20597	20905	GCA_005888175_1_2_28	GCA_005888175_1_2_28	-	54181	.	PFAM:PF07889.11	lipoprotein	MTINVEFWHLVGLLISFLGCCFGFAKMLVAQFQNSLSERHHNQMKVNDKVEDIEKQLNQMQSALPLNYVLRDDYIRGQAILEAKMDALHKTLSDLYKMESTR*	phrogs_hmm	hypothetical_protein	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0028	shell	direct	high	308	0.997	GCA_005888175.1_00038
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	20901	21284	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	20902	21285	GCA_005888175_1_2_29	GCA_005888175_1_2_29	-	54181	.	.	hypothetical protein	MNLQVIVVCTTFFILLCGYVFFRLKQAQRRVEKLIEENAQLQTEKAVAQTQVKHHQVRQKNEENIVSSSRERIIDSLHNKTISVINPSCSGFRLIKASRQDSTETLRQILVHNQTYREICPIQGEKK*	.	hypothetical_protein	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0029	shell	direct	high	383	0.997	GCA_005888175.1_00039
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	21281	21511	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	21282	21512	GCA_005888175_1_2_30	GCA_005888175_1_2_30	-	54181	.	pfam10841	Protein of unknown function (DUF2644). This family of proteins with unknown function appear to be restricted to Pasteurellaceae.	MKKLNELITNTDGRLSTTGTIQFGGALLMAIILAICVYLDRSYVPELFMTFAIFCGGGIATKGFANAMERRQGGRE*	mmseqs_cdd	nonviral_gene	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0030	shell	direct	high	230	0.996	GCA_005888175.1_00040
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	21495	21596	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	21496	21597	GCA_005888175_1_2_31	GCA_005888175_1_2_31	-	54181	.	.	hypothetical protein	MKREIRGITFFSLVWEVMIFGGFIKEPKNEKAE*	.	hypothetical_protein	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0031	shell	direct	high	101	0.99	GCA_005888175.1_00041
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	21599	21742	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	21600	21743	GCA_005888175_1_2_32	GCA_005888175_1_2_32	-	54181	.	.	hypothetical protein	MSASIKVKVSRSLKGKSFQKLSNNAKQNQRLNSGVTAANAFYLLWGY*	.	hypothetical_protein	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0032	shell	direct	high	143	0.993	GCA_005888175.1_00042
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	21751	22287	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	21752	22288	GCA_005888175_1_2_33	GCA_005888175_1_2_33	-	54181	.	PDB:1M0D_D	endodeoxyribonuclease-I	MAIHHIVIHCSATTNGKPLRTSSQSAAERIDEWHQKRGFKRNPTYIKRFNPHLKHVGYHFIIDTNGTVETGREVGETGAHVKGHNQNSIGICLVGGITGMGKNHGEYTRKQWQALHKLLRKLESRFPSSRICGHRDLSPDLNGDGTITPNEWLKDCPCFDVWEWLDSEQVINDEHLFE*	common_virus_hmm	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0033	shell	direct	high	536	0.998	GCA_005888175.1_00043
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	22374	22793	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	22375	22794	GCA_005888175_1_2_34	GCA_005888175_1_2_34	-	54181	.	.	hypothetical protein	MKKWLVITLMMLGITACGEPEDPNAPTQAEKDTLTLAFINKIKKDSSGAVECKTKQVNNRYYVGCALISLDGRGNTYIFLYNKDKDPVKRFYALNGTAMTIYDNYFKNESLLGSYKDTFGLPMEKDIDLSLIQKSFEEK*	.	hypothetical_protein	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0034	shell	direct	high	419	0.998	GCA_005888175.1_00044
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	22867	23241	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	22868	23242	GCA_005888175_1_2_35	GCA_005888175_1_2_35	-	54181	.	pfam08765	Mor transcription activator family. Mor (Middle operon regulator) is a sequence specific DNA binding protein. It mediates transcription activation through its interactions with the C-terminal domains of the alpha and sigma subunits of bacterial RNA polymerase. The N terminal region of Mor is the dimerization region, and the C terminal contains a helix-turn-helix motif which binds DNA.	MSTNADIFDEKAPEILADLAKHIETQLLTKVKSNEFNSELAKQIGIEVASHIAQSWGGEVIYIPRNLVLLLSERDRKIFNEFNGSNHRELARKYNVSMQWIYQIVKKVTKEEIARRQFDMFSEK*	mmseqs_cdd	nonviral_gene	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0035	shell	direct	high	374	0.997	GCA_005888175.1_00045
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	23245	23733	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	23246	23734	GCA_005888175_1_2_36	GCA_005888175_1_2_36	-	54181	.	COG4382	Mu-like prophage protein gp16  [Mobilome: prophages, transposons]. 	MRYTKAKYIQLIHIAKHKLSIDESTYRSLLMNLTGKSTCKQMKVTELDKVLSALETKGFQNNAASFHKKTHTSNYHSPSSGKAVVKHDIALKIRAVWIDMSKQGFLRDGSEEALNQFVRNVINPILKPEKLMVLGVAALDYRQGTIVLERLKKWREREINRS*	mmseqs_cdd	nonviral_gene	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0036	shell	direct	high	488	0.998	GCA_005888175.1_00046
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	23843	24130	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	23844	24131	GCA_005888175_1_2_37	GCA_005888175_1_2_37	-	54181	.	.	hypothetical protein	MAKYLYRYALESNNPTNNDDGNIWGDESLCFDDVALHIAKENAYAWDMFEEPEREVMYVWRDGDFENRLRFLAKFEVIQRLDVIELEEDDDPDDF*	.	hypothetical_protein	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0037	shell	direct	high	287	0.997	GCA_005888175.1_00047
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	24134	24364	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	24135	24365	GCA_005888175_1_2_38	GCA_005888175_1_2_38	-	54181	.	pfam04448	Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	MSENNGWIKCSERLPDTFTGFDLLIRSLPVLVYGKYTAGENNKIFGAQIFGDRWYSADGECAEITHWQPMPQPPEE*	mmseqs_cdd	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0038	shell	direct	high	230	0.996	GCA_005888175.1_00048
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	24365	24739	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	24366	24740	GCA_005888175_1_2_39	GCA_005888175_1_2_39	-	54181	.	.	hypothetical protein	MQTKIIQWLADDENVGLSSKCMAFVIGFDVIPRRKSYPLDPSDLSRCVKLLERVPKMRDYLYKMKEISPIWAKLVEHWDELERLLNEEKGSGRCPKTYQLMKKLTEDDQNVVFRHGGFSIRRGK*	.	hypothetical_protein	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0039	shell	direct	high	374	0.997	GCA_005888175.1_00049
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	24812	25030	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	24813	25031	GCA_005888175_1_2_40	GCA_005888175_1_2_40	-	54181	.	.	hypothetical protein	MTVPTLNLDDITREVADVIGNLELVQSCVLDGDIDTAKTMYARTLEMAKKFGHRFACSEVKLEFGAVFDPNC*	.	hypothetical_protein	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0040	shell	direct	high	218	0.995	GCA_005888175.1_00050
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	25027	25185	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	25028	25186	GCA_005888175_1_2_41	GCA_005888175_1_2_41	-	54181	.	.	hypothetical protein	MADYIVRLYGVIEVKMTAETLEQAIELCDLNTAPSLTGMVVEIDSVIEGEEV*	.	hypothetical_protein	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0041	shell	direct	high	158	0.994	GCA_005888175.1_00051
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	25195	25392	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	25196	25393	GCA_005888175_1_2_42	GCA_005888175_1_2_42	-	54181	.	NF033650	ANR family transcriptional regulator. ANR family transcriptional regulators include the AggR-activated regulator Aar. The name ANR (AraC Negative Regulators) refers to an effect on, rather than homology to, certain AraC family transcriptional regulators.	MNKSINKFDRFKYYSEQAANSERRGELQDAKEQWAIAELNAPNARNQEWCKHRAVFCERALRKPF*	mmseqs_cdd	nonviral_gene	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0042	shell	direct	high	197	0.995	GCA_005888175.1_00052
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	25497	26015	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	25498	26016	GCA_005888175_1_2_43	GCA_005888175_1_2_43	-	54181	.	COG4396	Mu-like prophage host-nuclease inhibitor protein Gam  [Mobilome: prophages, transposons]. 	MAKKATRIKTDTFAVRYQTRDEVEVAIKEIGDLNRELERLAIEQNDKLAAITEEYAPLMNAIKEKLVPKQDAVQAWCESRRDELTQNGKTKTGSFNTGEVQWRQRPPSVGIRGAESVLESLRTLGLVRFIRTKEEVNKEAMLNEPELAATVAGVTIKTGVEDFVITPFEQDI*	mmseqs_cdd	nonviral_gene	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0043	shell	direct	high	518	0.998	GCA_005888175.1_00053
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	26037	26240	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	26038	26241	GCA_005888175_1_2_44	GCA_005888175_1_2_44	-	54181	.	.	hypothetical protein	MKKYLLMIVLLLSACTDVETCNLQCQKERANAEWKQEHSEFQPNLTPEQERYIVEWLVEHYPNGTQP*	.	hypothetical_protein	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0044	shell	direct	high	203	0.995	GCA_005888175.1_00054
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	26240	26692	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	26241	26693	GCA_005888175_1_2_45	GCA_005888175_1_2_45	-	54181	.	COG2842	Bacteriophage DNA transposition protein, AAA+ family ATPase  [Mobilome: prophages, transposons]. 	MIVEKLTGTRGIVIVDESDHLTYDAIEELRYIQEKAEVGFALIGNDRVYTRMQGGINPAHEHARLWSRLGNRCAIKASEKEDIQSVAAAWQLDTKDKELMKALYDIGTKAGGLRALTQYLRLAGIAAKGQGVAINLDLILQAKMHMQGAI*	mmseqs_cdd	nonviral_gene	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0045	shell	direct	high	452	0.998	GCA_005888175.1_00055
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	26740	27156	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	26741	27157	GCA_005888175_1_2_46	GCA_005888175_1_2_46	-	54181	.	COG2842	Bacteriophage DNA transposition protein, AAA+ family ATPase  [Mobilome: prophages, transposons]. 	MTLTQQIQQILERKNITQRELSQQIGMSAGALSAYLKGTYAGNIENIENALENWLKNQDKKIRSFIEAPEFIQTPTAERIFNALEMARFATTIVPIYGASSVGKTKACQEFKKQNQNVWMITISPSRASLNAFYMNLP*	mmseqs_cdd	nonviral_gene	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0046	shell	direct	high	416	0.998	GCA_005888175.1_00056
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	27183	29192	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	27184	29193	GCA_005888175_1_2_47	GCA_005888175_1_2_47	-	54181	.	PDB:1BCO_A	Mu-Transposase	MKNWVTAKEIAGIGGLSKHPTNVNRLARKEKWIFREIQGVQGGGYEYSFSSLPLEVQTEYLLKHSEELKVNKENNDSNQQTMIESAWNVLASATFEQEKRAERRFQAVVKVARLVENKIPLMKAFEQVVALYATDSNDETISKGSLKRWWYKVKTHPQGIWLPLLLDRTERDNSCRWADISDKAWAFFCADYLRKSKPKFSVCYYRLTLAAEENDWTIPSLSSLKRKFYNEFTEAEIALARGGEHELRELTAPQIRTVMDLEAYEIVNGDGYQHNVFVDWYEDGRPPIRPKTWFWQDVRTRRILSYCVDDSENGDQIRQATLRMIKQYGIPKTILMDNTRAASDKQTTQQRKRGKRQTAGIKIDGMFDRLGIKVIRTLVFKGRGNGRAKPIERAFKRDSLPAYVDGDARLEAFFTGWSVTEKTEDYQFKKGVNKALFLEILEQGVRLWNDKAGRETELGQGIFSADQLWARDYAQTRQTFATEEQLRQLMMLGESTKVDKHGRFTLKAGYVLNNQKNVYEAQALIGGNVGSVIVRYDPDDLHGTVHIYDQNGVYLCNGECVEKIAFNSEEGARVQKRLINEQRRITKKMVDNHEKLSEHEMAQYRKQFEQSAADFVEPAEKQVFSWTQFADGNTVKTIKLDHELETETEEQNTLSFEQDLFNGLKQVQK*	common_virus_hmm	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0047	shell	direct	high	2009	1.0	GCA_005888175.1_00057
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	29203	29430	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	29204	29431	GCA_005888175_1_2_48	GCA_005888175_1_2_48	-	54181	.	COG3423	Predicted transcriptional regulator, lambda repressor-like DNA-binding domain [Transcription]. 	MSRNKRSQDMSNHEIRGELMKKGKSLSQLGVENGLAKTTVRNALDKPYPKGERIIAEALGMKPWDIWPSRYLNQD*	mmseqs_cdd	nonviral_gene	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0048	shell	direct	high	227	0.996	GCA_005888175.1_00058
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	29641	30141	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	29642	30142	GCA_005888175_1_2_49	GCA_005888175_1_2_49	+	54181	.	pfam02316	Mu DNA-binding domain. This family consists of MuA-transposase and repressor protein CI. These proteins contain homologous DNA-binding domains at their N-termini which compete for the same DNA site within the Mu bacteriophage genome.	MKSKKEWYLPRDLAGLGDLSPFPSNVTRKAKQEGWIKREAKGIKGGGFEYHYSSLPPAVQQALGFKPNEAKKEPLPAARVGERLKEIDRIMAAISSLEAKVKELEEPTLDSLPDTLDQAEKRLVRWFRQCNKDRQAMLLSSAEVLADMSLKEQKESSEPLENCEVA*	mmseqs_cdd	common_virus	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0049	shell	direct	high	500	0.998	GCA_005888175.1_00059
GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote	cenote	CDS	30138	30281	GCA_005888175.1	LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175.1_LNKQ01000002.1	GCA_005888175.1|LNKQ01000002.1	GCA_005888175_1_2	GCA_005888175_1_2@C0	30139	30282	GCA_005888175_1_2_50	GCA_005888175_1_2_50	-	54181	.	.	hypothetical protein	MQFKLILSIVHKINLPILTLLYNSFYYQGIVQIHRKDLLGLFIFKNL*	.	hypothetical_protein	C0	30282.0	0	30282	GCA_005888175.1|LNKQ01000002.1@region_1_30282@tool_cenote_CDS_0050	shell	ambiguous	low	5	0.035	GCA_005888175.1_00059
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	35831	36844	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	1	1014	GCA_005888175_1_26_30	GCA_005888175_1_26_30	-	61190	.	PDB:5C6K_B	Integrase	MAVRKDTKNGKWLAEVYVNGKRSRKWFLTKGDALRFYNQAKEGAQSAVDSVTVLASDDLPVLSFYVQEWFDVHGKTLSDCEARLAKLKNLCANLGDPPANEFNAEIFADYRKRRLDGEFSVNKNKPPKEATVNREHAYLRAVFNELKSLRKWTAENPLDGVRLFKERETELAFLYERDIYRLLVECDNSRNADLGLIVRICLATGARWSEAETLTQSQVMPYKITFTNTKSKKNRTVPISKELFDMLPKKRGRLFNDAYESFENAVLRAEIELPKGQLTHVLRHTFASHFMMNGGNILVLKEILGHSTIEMTMRYAHFAPSHLESAVKFNPLSNPAQ*	common_virus_hmm	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0001	shell	direct	high	1013	0.999	GCA_005888175.1_00935
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	36847	37140	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	1017	1310	GCA_005888175_1_26_31	GCA_005888175_1_26_31	-	61190	.	6X0A_C	Inosine-guanosine kinase (E.C.2.7.1.73)	MARRLFVNALAGDDLQLIFDYGVERFGQIQAALFLDKFYDAFSLLCEFDVGVACFDIQPNLYRYVVQGYVIFFERTSSALNVLRVLHGSQDVETQFS*	hhsuite_tools	hypothetical_protein	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0002	shell	direct	high	293	0.997	GCA_005888175.1_00936
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	37140	37367	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	1310	1537	GCA_005888175_1_26_32	GCA_005888175_1_26_32	-	61190	.	PF03693.14	Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH	MFTLSLQQSEQFADLMKTGHFKSEHELFDEMLKSFRYQQKLATLRKEIDKAMACEAVEVTDLNAFFDEIKCRGRK*	hhsuite_tools	hypothetical_protein	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0003	shell	direct	high	227	0.996	GCA_005888175.1_00937
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	37404	37607	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	1574	1777	GCA_005888175_1_26_33	GCA_005888175_1_26_33	-	61190	.	COG0759	Membrane-anchored protein YidD, putatitve component of membrane protein insertase Oxa1/YidC/SpoIIIJ [Cell wall/membrane/envelope biogenesis]. 	MVWLSIQFILFYQRIAPRELRGACRFTPSCSNYAILALQKYGFWKGWKMALNRLGRCKYPNGGEDLP*	mmseqs_cdd	nonviral_gene	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0004	shell	direct	high	203	0.995	GCA_005888175.1_00938
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	37607	37849	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	1777	2019	GCA_005888175_1_26_34	GCA_005888175_1_26_34	-	61190	.	PF13783.6	Domain of unknown function (DUF4177)	MAYTYKMIQIPPNIEVDKKHKDTGAATYLERTVNEYAAFGWEFIRVDEIGVQEKPGCLGALSGQKSFPVNYYVITFRKPV*	hhsuite_tools	hypothetical_protein	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0005	shell	direct	high	242	0.996	GCA_005888175.1_00939
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	37890	38063	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	2060	2233	GCA_005888175_1_26_35	GCA_005888175_1_26_35	-	61190	.	.	hypothetical protein	MSKKIITRKENLLLQEDFFRSVTEQITETEQRRKQKREEFENVKQCGANLTKHRFTY*	.	hypothetical_protein	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0006	shell	direct	high	173	0.994	GCA_005888175.1_00940
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	38194	38568	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	2364	2738	GCA_005888175_1_26_36	GCA_005888175_1_26_36	-	61190	.	PFAM:PF10078.8	transcriptional-repressor	MENRIDLNSYEIIERMKKICNVHTDKELATVIGIQPPSVNKWKVRNLVPLGPLLIISNQFSVSLDWLIFGCASNDLSTHEKLALIAFNDLDDHKKLEAIAFMTGLKTSSSQTGAITQHVSGSKK*	phrogs_hmm	hypothetical_protein	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0007	shell	direct	high	374	0.997	GCA_005888175.1_00941
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	38691	38882	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	2861	3052	GCA_005888175_1_26_37	GCA_005888175_1_26_37	+	61190	.	PFAM:PF04221.11	Arc-like-repressor	METNATPIQARKGRNPTLQISLEQKIISKIEALAIKEDRSISSMGRVLINRALAMTAQQEEQQ*	phrogs_hmm	hypothetical_protein	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0008	shell	direct	high	191	0.995	GCA_005888175.1_00942
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	38879	39118	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	3049	3288	GCA_005888175_1_26_38	GCA_005888175_1_26_38	+	61190	.	PFAM:PF11112.7	Cox-like-excisionase-and-repressor	MNKQNTICINIHMEQPYMTREEFAKKLDVSIGTIDRLRQQGVLKCIKMKNDKGEETERGLVLVDLVAIAVRNAKNAFQI*	phrogs_hmm	hypothetical_protein	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0009	shell	direct	high	239	0.996	GCA_005888175.1_00943
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	39251	39754	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	3421	3924	GCA_005888175_1_26_39	GCA_005888175_1_26_39	+	61190	.	.	hypothetical protein	MTKSSFTFFFQEYCEKHNLTNEEIQERFAILQYQAEVERDTTQAHQQLSAIFAKCREGYPRKQANNDETTSQYTGAEHQVIRDLFASLKQSAREAHSLHHQSHQGDVQVHAKSNPSRVLEVPAVTEVDKSVLAYLEAFFASDRSSSEILKLSNRLFNLGQAYNKSGK*	.	hypothetical_protein	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0010	shell	direct	high	503	0.998	GCA_005888175.1_00945
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	39773	40108	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	3943	4278	GCA_005888175_1_26_40	GCA_005888175_1_26_40	+	61190	.	.	hypothetical protein	MYVSENESVVEKWYRENGIPMSKARNSEETLHEMGLSKYPTERAFNHISDEQKGMLKALADIEPFEDYILPDLTGDKLWHYNEKGIDKLTKAFHAMSALRTPFPRALTRRD*	.	hypothetical_protein	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0011	shell	direct	high	335	0.997	GCA_005888175.1_00946
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	40169	42508	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	4339	6678	GCA_005888175_1_26_41	GCA_005888175_1_26_41	+	61190	.	PFAM:PF05840.12	Rep-protein	MQSMWEQQRDNTVSAKKAHMAVVACERYQAAENGHKFDRTSLPFDERYYTPLQLELFATNPVDFEFIEQKLENLPRQRQREYFRKLYIKAYRSVKDDGSIVFALGNKQRRYANDYLRNVLDVRLQKVFSQYNVNVDFLQTFINTPQWLLSVKDEMQQAVQFSTVPTREELSKHYNELHYSGFHFQLFGIQQKQKQLPFYLITERKLKKMAYEMAAAFIRFQCDCSHFLKNGIEKDNEGDIQGYFYQLYKWCGEIALSAGFKIPHWEKIENDKRIKGEYIDSTLLRLTCEKWWFKQMRDIQKRMVEHIAIACGEVRANAASYISNQSFQEWQLQQRKNHDYLRAMIIENIDNPEEQVELFDMFLKSSSNPALRRNEMMVRLRGLEEWAEENNNEALFLTLTAPSSFHAGNGNKKWSGVNPRDTQNYLNKVWQQFRALLSKRNIKFYGMRVAEPHKDGTPHWHALFYVQAEHKEEVIRLFKQKALELDGNEKGAAEHRCKVEECDKTKGSATAYIAKYIAKNIDGFALAGEVSDEDPTLSLHDNALRVRAWASRWGIRQFQFYGGASISVWRELRRLISGQADDEIINKAQAAAGIANDYAAYMEIQGGALAKRTDQPIKLDYETKPANKYGEQRKAIIGLANRFSLKQVISRTKKWQIKKRPQDFAQRAESMVEHSSTASNSARSAPWTWTWTCVSNCNRSILEQKIKLLIQSICAPLSAQKLDYLFKYKRLIIDKYTAIELTENDVQLVKRNQNMMTSLSPVPRNIQKLKDFHKNNRIQ*	rep_hall_hmm	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0012	shell	direct	high	2339	1.0	GCA_005888175.1_00947
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	42520	42825	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	6690	6995	GCA_005888175_1_26_42	GCA_005888175_1_26_42	+	61190	.	.	hypothetical protein	MNKRKQKQLRRIMAAKRAEKCGQIDLKNLQAQVWDLAVQSQQTASWVKTQGETHRLLYRYFSKEIARLEKRRTPELILLAMASGFLGGAVVGYVLWLLAIL*	.	hypothetical_protein	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0013	shell	direct	high	305	0.997	GCA_005888175.1_00948
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	42835	43353	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	7005	7523	GCA_005888175_1_26_43	GCA_005888175_1_26_43	+	61190	.	PFAM:PF05869.10	Adenine-specific-DNA-methyltransferase	MNKSNTKKSDKDLWATPWWVFYYAEQYFNIKFDLDACAMEHNTKVKNFISPEQDTLTADWQGRYCWMNPPYSNPLPFVLRAISQSVLHNKTVVMLLNVDGSTKWFDMCVRNAKEIVYITNSRIPFINNETGEETDQNNKPQMLVLFEPKAPYGSLKSSYVSLHTMKESNNKK*	common_virus_hmm	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0014	shell	direct	high	518	0.998	GCA_005888175.1_00949
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	43433	43612	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	7603	7782	GCA_005888175_1_26_44	GCA_005888175_1_26_44	+	61190	.	COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family [General function prediction only]. 	MNSAKIIKQIEDDGWYLVNVVGSHHQFKHPTKKGRVTVPHPKKDLQIKTVKSILKQAGI*	mmseqs_cdd	nonviral_gene	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0015	shell	direct	high	179	0.994	GCA_005888175.1_00950
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	43676	44083	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	7846	8253	GCA_005888175_1_26_45	GCA_005888175_1_26_45	+	61190	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MLYPIGIEMGDENHTYGVVVPDVPGCFSAGDTLEEAFINAKEAITFHIEGLLEDGEEIPQPTSLQEHVKNPEYEGFTFSFVDVDLTHLMGKAEKINVTLPSLLIKRIDSFVATHPEYKNRSNFLAQVVTNKLLAA*	mmseqs_cdd	nonviral_gene	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0016	shell	direct	high	407	0.998	GCA_005888175.1_00951
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	44456	45490	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	8626	9660	GCA_005888175_1_26_46	GCA_005888175_1_26_46	-	61190	.	CDD:PHA02536	portal-vertex-protein	MKTNVTDNKKGIVIAPINDRTFSLNEISASPALDYVGIGFDENYNCYLPPVNRHALAKLPHQNAQHGGILHSRANMVSALYEGGKALSRMDMRALCLNLIQFGDVGLLKVRNGFGQVVRLVPLSSLYLRVRKDGGYSYLMKKSLYDTAQEIYRYDAKDIIFIKLYDPMQQVYGSPDYVGGIQSALLNSDATVFRRRYFSNGGHMGFILYSTDPDLTEEMEEEIAKKISESKGVGNFRSMFVNIAGGHPDGLKVIPIGDTGTKDEFANIKNISAQDVLTAHRFPAGLSGIIPTNTGGLGDPLKYREVYHYDEVMPLQEIIAETINQDPEIKNLLKIKFREQNFAK*	hallmark_hmm	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0017	shell	direct	high	1034	0.999	GCA_005888175.1_00952
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	45480	45617	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	9650	9787	GCA_005888175_1_26_47	GCA_005888175_1_26_47	-	61190	.	PHA02535	terminase ATPase subunit; Provisional	MTFTAERTVKTQHADVFFAICNAINKKSLSDKPRKRRGWSVLNEN*	mmseqs_cdd	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0018	shell	direct	high	137	0.993	GCA_005888175.1_00953
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	45614	47284	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	9784	11454	GCA_005888175_1_26_48	GCA_005888175_1_26_48	-	61190	.	CDD:PHA02535	terminase-ATPase-subunit	MTESKLRKRKTKRYDDEVIYAAKFLYLKKYTPKEIAEELGLNSTRPIYYWAEKYNWRNLISESGIEELIALRIITLTERENKSDQEIKELEALIDKDIQYKKQRVATVAKVTAKSAVNSADVSGNERAFADSGDGDERKKKKRVKNDISHVTPEMCQPFIDSLFDYQKHIRANKHHDVRNILKSRQIGATYYFSFEALEDAIFSGDNQIFLSASKRQAEIFKNYIVKMAREYFGVELTGNPIILSNGAELHFLSTNKNTSQGNSGHVYGDEYAWIRDFQRFNDVASAMATHEKWRETYFSTPSSKFHESYSFWSGDNWRDGDPKRKNVSFPTFAELRDGGRLCPDGQWRYVVTIEDALKGGAGTLFNIEKLKQRYSKYAFNQLYMCVWIDDADSIFTVHQLLKCGVDISKWKDFNPKADRPFGDREVWGGFDPAHSGDGASFVIIAPPALPSEKYRVLARYQWQGLSYVYQANQIRALYEKYNMTYIGIDATGVGYGVYELVKEFARRAATAIIYNPESKTGMVLKVHDLVEHGQIEWSEKELDILSTNQQNLAIR*	hallmark_hmm	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0019	shell	direct	high	1670	0.999	GCA_005888175.1_00954
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	47488	48375	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	11658	12545	GCA_005888175_1_26_49	GCA_005888175_1_26_49	+	61190	.	CDD:PHA02529	capsid-scaffolding-protein	MNKSKLKTDFICIATSGYTVDGRQITAQELHEMAETYDPEHYTANLWPEHRRYFSCGEVLEVKAEEQENGEVKLFAKIAPNQQLIDFNRDGQKLFTSVEIAGNFRNSGKAYLSGLGVTDSPASVGTTKLDFFNHQDKVQCSEFINIDFTEQKNDEEKMTRSFFNAIKQFFSSSEQQEEQSTPHNNNNKEDDAMNDKQFEQLIEAVNGLGAKIDNHFSAKVETKEPKNKPEEKKDEQPQSVTAEQFNQLLTTVQALDKKFNELSQEQTTVPSGVPTVESENVYSLNGYNIDLSKGF*	hallmark_hmm	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0020	shell	direct	high	887	0.999	GCA_005888175.1_00955
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	48379	49389	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	12549	13559	GCA_005888175_1_26_50	GCA_005888175_1_26_50	+	61190	.	CDD:TIGR01551	phage-major-capsid-protein,-P2-family	MNKQAYYALVAALAKHFNQPMDSILRGESFSLKAPEAALLGENIQQRSDFLKQINMVQVAHIKGQKLFGATEKGITGRKQTGRNLANLDHTQNGFELSETDSGIIVPWALFDSFAIFKDRLVELYSEYFQNQVALDILQIGWNGQSVANNTTKTDLSDVNKGWLKLLQEQRAANFMTESTKSSGKITIFGDNADYANLDDLAFDLKQGLDFRHQNRNDLVFLVGADLVSKETKLIQKKHGLTPTEKAALGSHNLMGSFGGMNAITPPNFPARAAAVTTLKNLSVYTEAESVRRSLRNDEDKKGVVTSYYRQEGYVVEDLGLMTAIDHTKVKLNGEA*	hallmark_hmm	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0021	shell	direct	high	1010	0.999	GCA_005888175.1_00956
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	49430	50248	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	13600	14418	GCA_005888175_1_26_51	GCA_005888175_1_26_51	+	61190	.	CDD:PHA02537	terminase-endonuclease-subunit	MQALAEINQVSESNTQQSAVATHGNDYAVLEIALQNDVNAVRAFQTRAEKLDYKRNRFLPKWLPFVNEYLDKGAIYQNDYLVYCIVYLFDIADFDRALSLAEKAIEQNQSMPQGWQTTLPNFVADQIYNWTDKTAAAGQSVEPYFTQTFKNVATQWKLHEIVTAKWLKLAAALLLRSPQGKVQASGIDDAETLVLAIQLCNRAFQLNQKAGVKNMIERCVMRLNALAKSGDYDPNRLPQVAGLSLEPSQIDFDLVIKKLTARPLQNSEEGNV*	hallmark_hmm	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0022	shell	direct	high	818	0.999	GCA_005888175.1_00957
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	50241	50693	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	14411	14863	GCA_005888175_1_26_52	GCA_005888175_1_26_52	+	61190	.	PFAM:PF05926.10	head-completion-protein	MFNGRTQDYDDTVITNNGFWSDIYVEEFQKQRAIPLQIPVEMVKTALIAAMQGVNLDLAEVEENHRKSAVNSVTEISSSLINGENYAETLYKKAVFARAKAELLPEFNTLSGREIHQNRDYVTEQKSLLAEATHAIRTLKGKKRGSVWLL*	hallmark_hmm	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0023	shell	direct	high	452	0.998	GCA_005888175.1_00958
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	50681	51163	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	14851	15333	GCA_005888175_1_26_53	GCA_005888175_1_26_53	+	61190	.	PFAM:PF06891.10	phage-tail-completion-protein	MATVKKMRYQQLTAFLLTKLPKRYHGNFYSWIEDGKLLNEGRQVTENGIEVCHLSYNGVFHFEALPFNEISPAYLMAHIQVWVNENDPMRDVLDESEIPFDLDIIDDNTADLIFTIAFREPLTAMEDSEGELKIEGVNYRLDDIDVFTAEYIDVVVTVEQ*	hallmark_hmm	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0024	shell	direct	high	482	0.998	GCA_005888175.1_00959
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	51172	51885	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	15342	16055	GCA_005888175_1_26_54	GCA_005888175_1_26_54	+	61190	.	PFAM:PF05069.12	Virion-morphogenesis-family	MGLKPGTVEKLKHTLLYLRLTPKMRNQVMQKVLWRLKKNAEKNVSHQQSPDGKTWTPRKKKLKGGVRKNKLLKESATNLNSKLEQQGERGKLFYKNPHWAKVRAIHQYGLEVPVEQTEKDKKALAKLLAQNNQPATPQQARRLRELGYQVRNGKTKTGKQKYKKVRLKSIRQTMSRGQAGLIIRMMEKQKGINIRRGLASYKMAKREFLDENPKRNADIITEELLKGFEKAGYHLQP*	hallmark_hmm	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0025	shell	direct	high	713	0.999	GCA_005888175.1_00960
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	52015	52143	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	16185	16313	GCA_005888175_1_26_55	GCA_005888175_1_26_55	+	61190	.	.	hypothetical protein	MKQYGLFKTIFGLGLLVIMARFPETIDSIANMISLLTTIRGQ*	.	hypothetical_protein	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0026	shell	direct	high	128	0.992	GCA_005888175.1_00961
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	52147	53277	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	16317	17447	GCA_005888175_1_26_56	GCA_005888175_1_26_56	+	61190	.	PDB:3J9Q_Q	tail-sheath	MFPSVQINALNQLSGETKEIERHALFVGIGTTNQGKLLALTPDSDFDKVFGETDTDLKKQVRAAMLNAGQNWFAHVYIAQEDGYDFVECVKKANQTASFEYCVNTRYLGVDKASIGKLQECYAELLAKFGRRTFFIQAVQGINRNTSDGETWDQYVQKLTTLQQTLVADHVCLVPLLFGNEAGVLAGRLANRAVTVADSPARVQTGALVSLGSANKPLDKDGNELTLAHLKSLETARYSVPMWYPDYDGYYWADGRTLDVEGGDYQVIENVRVVDKVARKVRLLAIAKIADRSFNSTISSTEYHKNYFAKPLRDMSKSATINGKDFPGECMPPKDDAITIVWQSKTKVTIYIKVRPYDCPKEITANIFLDLDSLGE*	hallmark_hmm	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0027	shell	direct	high	1130	0.999	GCA_005888175.1_00962
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	53281	53733	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	17451	17903	GCA_005888175_1_26_57	GCA_005888175_1_26_57	+	61190	.	PFAM:PF10772.8	major-tail-protein	MERISGMSFDFYLFGLPIHAESISLSITDNSAVVQTRGIPDGWASGDVTAEGEIELDAKNFSKLSAAAAAAGSYRSLPETDFTFFAQRGGIRDKVETFGNKIILTDVLSIDPKGGAKSTKKLKYFVTSPDFVRINGVPYLSDEDTRDLLG*	hallmark_hmm	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0028	shell	direct	high	452	0.998	GCA_005888175.1_00963
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	53820	54056	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	17990	18226	GCA_005888175_1_26_58	GCA_005888175_1_26_58	+	61190	.	pfam16080	Bacteriophage holin family HP1. Phage_holin_2_3 is a family of small hydrophobic phage proteins called holins with one transmembrane domain. Holins are produced by double-stranded DNA bacteriophages that use an endolysin-holin strategy to achieve lysis of their hosts. The endolysins are peptidoglycan-degrading enzymes that are usually accumulated in the cytosol until access to the cell wall substrate is provided by the holin membrane lesion.	MNSKIDSTIPFIGSLTALISGYSLHEWASLFGILFGAVSVWFAYRKYKEDVQARKDELAYKMLAAKIEAKKLGIAIDE*	mmseqs_cdd	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0029	shell	direct	high	236	0.996	GCA_005888175.1_00964
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	54049	54609	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	18219	18779	GCA_005888175_1_26_59	GCA_005888175_1_26_59	+	61190	.	CDD:cd16901	P1-lysozyme	MSKKLGAMILCSAAAVVTAFFAQQKDLPAQQQNQVSLKAVSMIVNLEGCVRNPYKCPADVWTNGVGNTHNVDKTKILTIDEVAVDLRQNIKQAENCINADFNGRKMNQDQYDAMISLAFNVGCGNIKTYYSKTQGKRVATTLYRAAQAENWILMCNRIEDFNKSAGRVLKGLQIRRAKEKALCLGE*	common_virus_hmm	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0030	shell	direct	high	560	0.998	GCA_005888175.1_00965
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	54609	54941	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	18779	19111	GCA_005888175_1_26_60	GCA_005888175_1_26_60	+	61190	.	PFAM:PF10828.7	Rz-like-spanin	MEFKALFMGVFLMVFVGCIGSTLHYKKQAETTALLLKQNEQTIEQNKVMLQRYERQHAKLTYQLNHANKKAEQRSQQLKDVLNNAENKNWTNERVPNDVAGVLNQRTTTK*	phrogs_hmm	hypothetical_protein	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0031	shell	direct	high	332	0.997	GCA_005888175.1_00966
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	54898	55119	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	19068	19289	GCA_005888175_1_26_61	GCA_005888175_1_26_61	+	61190	.	PFAM:PF08139.11	Rz-like-spanin	MMLLACSTSVPQRNNLKLICPQTTECRALSVNIRINGDLAESLNQALDRLEICTTAYTAITKCITDFNNQKEN*	phrogs_hmm	hypothetical_protein	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0032	shell	ambiguous	low	45	0.203	GCA_005888175.1_00966
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	55122	55430	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	19292	19600	GCA_005888175_1_26_62	GCA_005888175_1_26_62	+	61190	.	pfam10963	Phage tail assembly chaperone. This is a family of phage tail assembly chaperone proteins.	MEKTQAQTLLEKLTGNLKDSVTLNIAGVDFTFIRDNAAYDQMLNDIESNNKVTPIKDYLLAIVAREQKEALLEIIHVPTLAAQLAAKVNEVFVPEIQITVKN*	mmseqs_cdd	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0033	shell	direct	high	308	0.997	GCA_005888175.1_00967
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	55617	57893	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	19787	22063	GCA_005888175_1_26_63	GCA_005888175_1_26_63	+	61190	.	PFAM:PF10145.8	tail-tape-measure-protein-	MSAVQGLEYIISLTDQLSAPLKGVMKSIDDLGKRGEAAMKKIGLGVAGIVGAGFALKSALDPAIELNRAIGEVRSLGVADDALEKLSKTALNFSSQYGESAVDFVRSSYDIQSAIAGLNGNELAEFTKTSNLLAKGTKASAATITNYMGTMYGIFAEDATKLGNANWVNKIAGQTALAVKMFKTSGDGMSAAFKSLGAAAKSAKIDVAEQVGVLGNLQASMSGSEAGTKYKAFLAGVGATQKELGLSFVDTNGDMLDMVTILNKIKGKFGDTLDVAQATKLKKAFGSDQAVDLIKFLLPKTKELKNNIADIAKVSDTKALAQMARSMVDPWSRLSQIITGVKTAIGGEILKKLDPIMHKVADLGQEFIDWLKTYKNIARWIGYIIGASIGFAAVAATISLVSGAMGLLKVGAIAAFAPIRGLLSLMSLLGKPLVLIRSAIMLIFAGFKTLISVVWAVINPLKMLRLVFAFAFSPLSILLLAGLAIYKFRHQLKDLWNGVKQGFGSLESHLAPLYRAFDIVKSAGQKVSNAIGRIAGLFSANAESAMLFQNVGVAVGQAIGFAFDVVLFVIELIARQIEAVATIFSNVADVIIATWHNVIDDWESKSAWDIFKGLATGIGQIFTTILKGIKDQFINTINWIIDKVNIVSGKIGFELPKIPNTWLSDHAQVTTVTAASNISSLGLNAAVDNASWKKSPSIDLPNNLKPQLNSMPQGSVTKTLTQNRTEQRTINYGGLAFYGYDKREITQELRNKEQLAAG*	hallmark_hmm	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0034	shell	direct	high	2276	1.0	GCA_005888175.1_00968
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	57897	58232	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	22067	22402	GCA_005888175_1_26_64	GCA_005888175_1_26_64	+	61190	.	pfam10761	Protein of unknown function (DUF2590). This family of proteins has no known function.	MEKLYLDLLITGEDMTRDSGNQPLICDNRISIAQDIKHAILESGLATQLIAERSRIFRRDIILQMVLLVEEDARLIPGTVSISEARLGQLFITAETYEFGRLDELELRLNE*	mmseqs_cdd	nonviral_gene	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0035	shell	direct	high	335	0.997	GCA_005888175.1_00969
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	58225	59394	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	22395	23564	GCA_005888175_1_26_65	GCA_005888175_1_26_65	+	61190	.	PFAM:PF04865.13	Baseplate-J-like-protein	MSENFKQMLAESGLPTEETQIRQEFERLTAEEGLITNTSRMSPFWRLITAIAVKPVKWLTDHLIAEILPNLFVKTAKDSWLQLQAWTVGLDFKAATKAEGVVHFTKESDVTDLTIKAGTVIQTERINDVIFRLIVTKDTIIPKGVLRAPVPVIAEQAGANFNLATGYYRILPESIAGISAVENLGDWLTSPGADRETNDELRERYRTQFSSVGQHHIDSVYKGMIAKVAALSVDRIYFKHDAPRGPGTANAYLLLDTGVTSQPFIDKVNRHVRDEGFHGHGDDLLCFAMPETRHNVTCTIYFHSTIFVGDVRRQEILSQVENMIRAAFRENNNYNVTKTYPFRRFSWSKLGEEIHDSIGEIASIVWGQADIQSELSIPRIQQLSVTVQK*	hallmark_hmm	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0036	shell	direct	high	1169	0.999	GCA_005888175.1_00970
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	59404	59928	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	23574	24098	GCA_005888175_1_26_66	GCA_005888175_1_26_66	+	61190	.	PFAM:PF09684.9	Tail-protein	MKIKLPFWMDKGELNKVAVLFGKWWDYVLSAVKFPFNILDEEHCSERILNLIAYQRDVERFEGEPLELFRKRVKYAFLNAKDAGSKAGFIRIFERLGIGYVEIEERFDRENWDVIKIRISDSQLAKKTALLNLIIRKYSRTCRRYTFEVITKETVSIYHGEFNHDHQSFYVKVN*	hallmark_hmm	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0037	shell	direct	high	524	0.998	GCA_005888175.1_00971
GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote	cenote	CDS	59955	61187	GCA_005888175.1	LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175.1_LNKQ01000026.1	GCA_005888175.1|LNKQ01000026.1	GCA_005888175_1_26	GCA_005888175_1_26@C1	24125	25357	GCA_005888175_1_26_67	GCA_005888175_1_26_67	+	61190	.	UniProtKB:R9TNR5_9VIRU	Tail-fiber-protein-	MASLITPQFERYVAEQTIARGTVQFDEFIFANIPGLNEHNLAQYLTMPTSAQIVHRQAVSQSGVINENAVVYSVTIGTEVGDFDFNFIGLINRSKNLLAVAVQTDTVKKIRNKNAVQGNSITRNILLEFSGAKALTGINVNANTWQIDFTVRLHGLDEKIRLTNRDLYGRAVFFDDSFLVKRKTGHQFTIQPGTAYVEGVRMDLGAEHHLTANSLPCSIYADVVHHCTVTGEYQTEIKYLTQSKADYVDTVNRQHYVQILADIDSQGNVTDRRLLSPFLGMNPLTLDDTTENNKDKQGHTHKLPIASLVKKGIVKLFSGYDSDAEDMAATSKAVKIAYDKAVEAKTTADGKVGLNGNESINGEKSFENRIVAKRNIRISDNPIYASRGDYLNIGANDGDCWFEYKSSNREI	hallmark_hmm	common_virus	C1	25360.0	35831	61191	GCA_005888175.1|LNKQ01000026.1@region_35832_61191@tool_cenote_CDS_0038	.	unmatched_CDS	none	0	0	.
GCA_005888175.1|LNKQ01000027.1@region_1_4366@tool_cenote	cenote	CDS	2	334	GCA_005888175.1	LNKQ01000027.1	GCA_005888175.1|LNKQ01000027.1	GCA_005888175.1_LNKQ01000027.1	GCA_005888175.1|LNKQ01000027.1	GCA_005888175_1_27	GCA_005888175_1_27	3	335	GCA_005888175_1_27_1	GCA_005888175_1_27_1	-	4366	.	pfam13018	Extended Signal Peptide of Type V secretion system. This conserved domain is called ESPR for Extended Signal Peptide Region. It is present at the N-terminus of the signal peptides of proteins belonging to the Type V secretion systems, including the autotransporters (T5aSS), TpsA exoproteins of the two-partner system (T5bSS) and trimeric autotransporters (TAAs). So far, the ESPR is present only in Gram-negative bacterial proteins originating from the classes Beta- and Gamma-proteobacteria. ESPR severely impairs inner membrane translocation, suggesting that it adopts a particular conformation or it interacts with a cytoplasmic or inner membrane co-factor, prior to exportation. Deletion of ESPR causes mis-folding of the TAAs passenger domain in the periplasm, substantially impairing its translocation across the outer membrane.	MNKIYRLKFSKRLNQLVAVSEITAGHDRHSGCQNAVDTTSSFQMTKWLKLKPLASLISLLSFGFATQTAMANGLQGMEVVSGSASMSINGKSTTITNSPNAIINWKQFNIN	mmseqs_cdd	nonviral_gene	NaN	.	0	4366	GCA_005888175.1|LNKQ01000027.1@region_1_4366@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_005888175.1|LNKQ01000027.1@region_1_4366@tool_cenote	cenote	CDS	717	938	GCA_005888175.1	LNKQ01000027.1	GCA_005888175.1|LNKQ01000027.1	GCA_005888175.1_LNKQ01000027.1	GCA_005888175.1|LNKQ01000027.1	GCA_005888175_1_27	GCA_005888175_1_27	718	939	GCA_005888175_1_27_2	GCA_005888175_1_27_2	-	4366	.	PDB:3FZ2_G	tail-completion-protein	MITQIENALVERLQRGLGRLVNTVKSYGGELDDESLGTSRLPMCLVTFGGARIERMGTNLKRHQSTCLFCKRH*	hallmark_hmm	common_virus	NaN	.	0	4366	GCA_005888175.1|LNKQ01000027.1@region_1_4366@tool_cenote_CDS_0002	shell	direct	high	221	0.995	GCA_005888175.1_00972
GCA_005888175.1|LNKQ01000027.1@region_1_4366@tool_cenote	cenote	CDS	922	1353	GCA_005888175.1	LNKQ01000027.1	GCA_005888175.1|LNKQ01000027.1	GCA_005888175.1_LNKQ01000027.1	GCA_005888175.1|LNKQ01000027.1	GCA_005888175_1_27	GCA_005888175_1_27	923	1354	GCA_005888175_1_27_3	GCA_005888175_1_27_3	-	4366	.	CDD:cd08053	head-to-tail-adaptor	MHYASAEDFVLRVGEVQAIELTDRDLTGQVNDNLLDVALSDSSSQIDGYLAARYTLPLVSVPQNLVRLCCDLARYRLASMSHVTITEEIITRYKLSLKELEDISMGKISLGLPPTENNDANEHDNGVIFTNPKNRIFARDHSN*	hallmark_hmm	common_virus	NaN	.	0	4366	GCA_005888175.1|LNKQ01000027.1@region_1_4366@tool_cenote_CDS_0003	shell	direct	high	431	0.998	GCA_005888175.1_00973
GCA_005888175.1|LNKQ01000027.1@region_1_4366@tool_cenote	cenote	CDS	1363	1698	GCA_005888175.1	LNKQ01000027.1	GCA_005888175.1|LNKQ01000027.1	GCA_005888175.1_LNKQ01000027.1	GCA_005888175.1|LNKQ01000027.1	GCA_005888175_1_27	GCA_005888175_1_27	1364	1699	GCA_005888175_1_27_4	GCA_005888175_1_27_4	-	4366	.	PF17891.1	Mu-like prophage FluMu N-terminal domain	MAKKNQKDDVTQDVQTAPDEQAQPQVETSADNAESAVEKYDESDDKEGQVIVPIGYSVKLREIHPQATYGRCGYRFNKESAVEIPVENLTSEQVIMLAEDPWLELIPICEK*	hhsuite_tools	hypothetical_protein	NaN	.	0	4366	GCA_005888175.1|LNKQ01000027.1@region_1_4366@tool_cenote_CDS_0004	shell	direct	high	335	0.997	GCA_005888175.1_00974
GCA_005888175.1|LNKQ01000027.1@region_1_4366@tool_cenote	cenote	CDS	1734	2654	GCA_005888175.1	LNKQ01000027.1	GCA_005888175.1|LNKQ01000027.1	GCA_005888175.1_LNKQ01000027.1	GCA_005888175.1|LNKQ01000027.1	GCA_005888175_1_27	GCA_005888175_1_27	1735	2655	GCA_005888175_1_27_5	GCA_005888175_1_27_5	-	4366	.	PFAM:PF10124.8	Major-Capsid-protein	MSINKAQVLNHITEAFRKEFIKGLENHPTQWAKIAMEISSTTKTNTYGFLGTFPKMREWVGQRQIQSMQAQGTSITNKKFESTVGIPREDIEDDQVGLYTPMMQLAGQSAAELPDDEVFSLLKKGKSTLCYDGQNFFDTDHPVFEKVDGTGNSTTQVNLTVGTDNDAPTFYIVDARLPIKPLIWQKRTAPEIEPKFDPAKSEHVFMEDEYLWGVRARGAAGFGFWQLIHRVEKTNLTKENVQKVIQTMKGLKGDGGKALNIQPNLILVPTNLEYAAKELFKTKQINGTTNILESELDVLASPFINE*	hallmark_hmm	common_virus	NaN	.	0	4366	GCA_005888175.1|LNKQ01000027.1@region_1_4366@tool_cenote_CDS_0005	shell	direct	high	920	0.999	GCA_005888175.1_00975
GCA_005888175.1|LNKQ01000027.1@region_1_4366@tool_cenote	cenote	CDS	2654	3589	GCA_005888175.1	LNKQ01000027.1	GCA_005888175.1|LNKQ01000027.1	GCA_005888175.1_LNKQ01000027.1	GCA_005888175.1|LNKQ01000027.1	GCA_005888175_1_27	GCA_005888175_1_27	2655	3590	GCA_005888175_1_27_6	GCA_005888175_1_27_6	-	4366	.	pfam10123	Mu-like prophage I protein. Members of this family of proteins comprise various viral Mu-like prophage I proteins.	MEAWYVTDTNGADVVALANNQRNPLPIDYEHQIIHSLKNGKEAPSAGWMEYFYFTPQGIFADVRWTDKAADYIKNGEYRYISAVFAYDTDGYVRKIFHAALTNTPALDGMDEAMVAASVNLLQEDNPMDKKLLAALCSLFVLKADASEADITEKVTALSAAKGDSPVDVLDVYAKLAEKEQSVAALSTQVGNPDPAKFVPVEQVAALQADFNALKTSVEADKKAALITAALSQGKLAPALKDWAQSLSIEALTGYLDKATPIAALAGGHQANEDPDKGNVAALTAEQQAAAKMLGMNDADYIKKYQSQEAK*	mmseqs_cdd	common_virus	NaN	.	0	4366	GCA_005888175.1|LNKQ01000027.1@region_1_4366@tool_cenote_CDS_0006	shell	direct	high	935	0.999	GCA_005888175.1_00976
GCA_005888175.1|LNKQ01000027.1@region_1_4366@tool_cenote	cenote	CDS	3531	3884	GCA_005888175.1	LNKQ01000027.1	GCA_005888175.1|LNKQ01000027.1	GCA_005888175.1_LNKQ01000027.1	GCA_005888175.1|LNKQ01000027.1	GCA_005888175_1_27	GCA_005888175_1_27	3532	3885	GCA_005888175_1_27_7	GCA_005888175_1_27_7	-	4366	.	CDD:TIGR01635	phage-virion-morphogenesis-protein	MIDIEINNAQEIASALERLAQATAHRAPLMRSIAGTMESAVLQNFDVGGRPKWLGLKYRQGTPLVDTENLMASITSEYRSYPTFTLWQISRYRRQTNRCGGMVCNRYKWRGCGGVGK*	hallmark_hmm	common_virus	NaN	.	0	4366	GCA_005888175.1|LNKQ01000027.1@region_1_4366@tool_cenote_CDS_0007	shell	direct	high	353	0.997	GCA_005888175.1_00977
GCA_005888175.1|LNKQ01000027.1@region_1_4366@tool_cenote	cenote	CDS	4027	4365	GCA_005888175.1	LNKQ01000027.1	GCA_005888175.1|LNKQ01000027.1	GCA_005888175.1_LNKQ01000027.1	GCA_005888175.1|LNKQ01000027.1	GCA_005888175_1_27	GCA_005888175_1_27	4028	4366	GCA_005888175_1_27_8	GCA_005888175_1_27_8	-	4366	.	PF18812.1	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	AAGVLSAESKDLLKSKTGTVWLSDDTLIKQFNSRDGQDFGLESYALFPDLFNQPDIVLQDNDRFYFIKNFEKQRILGVIKHLSKFNEIFVLSAREINIKEVEKMKGKLAVIK*	hhsuite_tools	hypothetical_protein	NaN	.	0	4366	GCA_005888175.1|LNKQ01000027.1@region_1_4366@tool_cenote_CDS_0008	shell	direct	moderate	327	0.965	GCA_005888175.1_00978
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	1	777	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	2	778	GCA_005888175_1_28_1	GCA_005888175_1_28_1	-	208040	.	PFAM:PF04233.13	minor-capsid-component	MPSAPKFAIGVEPKQAIEFLRQKKMLASKVLAKEMHDSALARATTIAHLTSLDMTKDIYQSLETAMREGKGFHVWKKELVSEFERKGWIFGKDPSIRGIDGHLLADPKTGEYFGTPRRLNTIYRVNMQSAYSAARYQRLRDNVDNRPYWQYSAVGDARTRPAHLALSGKVYRYDDPFWATFYPPNGFNCRCTVIALGERDLKRRGIDKPDDSSEFLVEVERPADKQGNREKTVGFKLPDGTIRVTDKGFDYNVGRLNYK	hallmark_hmm	common_virus	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0001	persistent	ambiguous	low	16	0.021	GCA_005888175.1_00979
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	761	1411	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	762	1412	GCA_005888175_1_28_2	GCA_005888175_1_28_2	-	208040	.	PDB:5NGD_B	Portal-Protein	MHNEVRRDLMISDAKQIAQTITQQIILPYLQINVDPNIAPHRIPYFEFDTKEYEDLSVFADAIPKLTGIGVQISESWVRDKLGIPEPQEGELILSTPQGEKTEEKTTALSAVLNHGKGCTCGCRAVALSAQNGKKDEQAELDGLIDDALANADFNQQLDPMMKQIVGVVMASESYDEAQEKLIALYPDLTSESHQAYLASAVFLADLLGAANAERT*	hallmark_hmm	common_virus	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0002	persistent	direct	high	650	0.998	GCA_005888175.1_00979
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	1417	2382	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	1418	2383	GCA_005888175_1_28_3	GCA_005888175_1_28_3	-	208040	.	PDB:5NGD_C	Portal-protein	MGFLDKVKGLLKGNETEPTQTDEAEVTATGRVLDDHPSAKITPSKLKQILEDAENGDIQAQHQLFMDIEEQDSSIAANMMTRKRSVLTLDWRIVEPRNATPAEEKLQAEIDELFYQYPNLEDLFMDLMDAVGHGFSALEIQWAQVDGKWVPKGFKPCPQSWFKLDKDDSLLLRTPANQMGEPLRPFGWVVHRHKSRSTQLARDGLYRTLAWLHMYKHYSVRDFAEFLELYGMPIRIGKYGAGATNAEKRTLLRALAEIGHNAAGIMPESMKIELHNVANAGAASGNNPFLQMVDWCEKSIARLILGQTLTSGRMVKAPLMR*	hallmark_hmm	common_virus	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0003	persistent	direct	high	965	0.999	GCA_005888175.1_00980
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	2462	4111	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	2463	4112	GCA_005888175_1_28_4	GCA_005888175_1_28_4	-	208040	.	PDB:4BIL_D	Large-Terminase	MKNKELLAELKAYSDSLRQKVEAKFEGWDDSLAAISERRKKVLDPVSGYDFFVSNYFPHYVRSRSRSQLHNYLFEQLPQVLQQPSSVHLAIAAPRGEAKSTLVSQLFTLYCLVTQKKRYALIVMDSIDQAYPMLEAIKVELEFNQRLRIDFPEMAGQGRVWQAATIITKANQKVQVAGSGKKLRGLRHGAYRPDLVVLDDIENDEQVRSPEQRDKLHDWLKKTVLPLGAAGDKLDVVYIGTILHYDSVLNRTLSSKAWKTAKFKALIRQPDDMSLWDKWEDFYLNEGEAVADAFYTQNQAAMDKGAVVSWAARPILTLMKIRARDGHATFDSEYQNDPLSSDDAMFANSLTYWTELPANLIYFGALDPSLGKAGASRDPSAILVGGYHRETGKLYVVEAQVKKRLPDLIIEDVIRMQKQYHCQRWFVETVQFQEFLKDELVKRSAQRGIPVPATATKPNTDKMLRIESLQPHTVNGLILLHSSQATLISQLRHFPKADHDDGPDALEMLWRNAVGSSAAIEWIGLDQLDTFDVEDEDDEDDDLYSFWRD*	hallmark_hmm	common_virus	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0004	persistent	direct	high	1649	0.999	GCA_005888175.1_00981
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	4261	4761	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	4262	4762	GCA_005888175_1_28_5	GCA_005888175_1_28_5	-	208040	.	pfam08822	Protein of unknown function (DUF1804). This family of bacterial protein is uncharacterized.	MAHDEKTKADVRRYYVFDCLTLELAAEKAGVSYNTARRWKREAEARGDNWDKVRDANTMASGKVEDVARGMLTAFVLYFENTMDEIKRTEALPVSEKAKLIQGLGDSYSKMVASSKRLLPEVSEMATAIKTITMFGDYIQANKPELINEFADLLEGFGKTLDKEFK*	mmseqs_cdd	nonviral_gene	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0005	persistent	direct	high	500	0.998	GCA_005888175.1_00983
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	4763	5029	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	4764	5030	GCA_005888175_1_28_6	GCA_005888175_1_28_6	-	208040	.	.	hypothetical protein	MSARERKRLAQLAEKQEINAKLDEILALSRQANHKIDRLDGRVDDIDTRLAKVEESLAKLGVRAAVIGGLSGLVVSVGFELIKAKFGG*	.	hypothetical_protein	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0006	persistent	direct	high	266	0.996	GCA_005888175.1_00984
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	5029	5286	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	5030	5287	GCA_005888175_1_28_7	GCA_005888175_1_28_7	-	208040	.	PFAM:PF07889.11	lipoprotein	MIDDKVFIGIGTTLIMTLVGWVWKSVNDKVAENEHGIKALEKQMQQDFQSKELAEVKDKHFESILKEVRDQLKEINQKLDKKVDK*	phrogs_hmm	hypothetical_protein	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0007	persistent	direct	high	257	0.996	GCA_005888175.1_00985
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	5410	5667	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	5411	5668	GCA_005888175_1_28_8	GCA_005888175_1_28_8	-	208040	.	PFAM:PF10883.7	Rz-like-spanin	MSMQIILAGLGIFALLGAYVMFKLKQARREIEQLLKTNEQLQMQKAVVETQVKHFEVRKKNEENTRHTSHNDVINRLQQSGDLRD*	phrogs_hmm	hypothetical_protein	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0008	persistent	direct	high	257	0.996	GCA_005888175.1_00986
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	5667	5957	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	5668	5958	GCA_005888175_1_28_9	GCA_005888175_1_28_9	-	208040	.	pfam10841	Protein of unknown function (DUF2644). This family of proteins with unknown function appear to be restricted to Pasteurellaceae.	MNKFFELFTNSDGRASTTGFIQFFGFLVMAGVLIYAVYLDRSTVTDLFFYFACFCGGSAATKGAVMAFQAKQTKLEEQITSETYVEPEQTDRPRGI*	mmseqs_cdd	nonviral_gene	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0009	persistent	direct	high	290	0.997	GCA_005888175.1_00987
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	6111	6614	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	6112	6615	GCA_005888175_1_28_10	GCA_005888175_1_28_10	-	208040	.	CDD:COG3926	Lysozyme	MSLTFTQIFNRLIGHEGGYVNDPRDPGGETHWGMTKRTALANGYQGNMRVMTRDQAFKIYYCAFWLRYQCDKMPEAVAYQFFDAAVNHGLGNASRMLQRAVNVADDGIIGNMTIAAIKQMAISDVIMRLNAERLEFYCKLGTFATFGKGWVRRVAGNLKYGAIDNEV*	common_virus_hmm	common_virus	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0010	shell	direct	high	503	0.998	GCA_005888175.1_00988
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	6695	7123	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	6696	7124	GCA_005888175_1_28_11	GCA_005888175_1_28_11	-	208040	.	PFAM:PF08765.10	late-transcriptional-activator	MVESLEDVAELLPETVQQMVDLVGFAAVEKIITNFGGATFRFTDGVHYFPKLKALIGLESAVKLREVFRGEWLYIPRCQTALRVLRNYRFKADYDYLTQHLNKSGRMAMLELCPKYQLSDRSGWEILAQVRHPEETHNLALF*	phrogs_hmm	hypothetical_protein	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0011	shell	direct	high	428	0.998	GCA_005888175.1_00989
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	7235	7651	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	7236	7652	GCA_005888175_1_28_12	GCA_005888175_1_28_12	-	208040	.	COG1598	Predicted nuclease of the RNAse H fold, HicB family [Defense mechanisms]. 	MFYPATFTPAEEGGYVVTFADLPEAITQGDTIEEAQEMAEDVLISCVEIYFDEERPFPLARACDSDETAVFMPDSVYAKVLLHNAMLAENVSKAQLARLTYIRPPEIQRILAPRHTTKIDTIAKALLGLGKQLQLSVV*	mmseqs_cdd	nonviral_gene	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0012	shell	direct	high	416	0.998	GCA_005888175.1_00990
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	7706	7882	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	7707	7883	GCA_005888175_1_28_13	GCA_005888175_1_28_13	-	208040	.	pfam07927	HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	MKQSEFLKWLKANGVEVENGSKHLKLYYQGKISHLPRHPAQELKKGLVEGIKKQLGLK*	mmseqs_cdd	nonviral_gene	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0013	shell	direct	high	176	0.994	GCA_005888175.1_00991
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	8008	8226	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	8009	8227	GCA_005888175_1_28_14	GCA_005888175_1_28_14	-	208040	.	.	hypothetical protein	MSIGYELEHQFDEIQSSLGGLHCLRQFLEITDNTADTLSYSQLAGMIAVFTAALDCQVSTVRQLVKELPIKA*	.	hypothetical_protein	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0014	shell	direct	high	218	0.995	GCA_005888175.1_00992
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	8237	8878	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	8238	8879	GCA_005888175_1_28_15	GCA_005888175_1_28_15	-	208040	.	COG3561	Phage anti-repressor protein  [Mobilome: prophages, transposons]. 	MTHFNITTFNGSIQNQSVQLINARELHEALKVSTRFQDWIKRRIADYGFTENEDYTCFSNLRSTENTGLNRFWGGQNKIEYHITLDMAKELCMLERSEIGRQARRHFIKMEQHAIALATEMQAQMLAIPTFLRNNPDELARLITTAQTAFLTANPQAKDFLRYREMGLSYREIGTLLGKTKDSVKWMAFKMRNLGFFSSTLPKTTAVQLDLLA*	mmseqs_cdd	common_virus	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0015	shell	direct	high	641	0.998	GCA_005888175.1_00993
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	9415	9618	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	9416	9619	GCA_005888175_1_28_16	GCA_005888175_1_28_16	-	208040	.	pfam04383	KilA-N domain. The amino-terminal module of the D6R/N1R proteins defines a novel, conserved DNA-binding domain (the KilA-N domain) that is found in a wide range of proteins of large bacterial and eukaryotic DNA viruses. The KilA-N domain family also includes the previously defined APSES domain. The KilA-N and APSES domains may also share a common fold with the nucleic acid-binding modules of the LAGLIDADG nucleases and the amino-terminal domains of the tRNA endonuclease.	MKNQIILANEVIALDEHGRISLNTLHKLSGTGKEKQPALWLRLHGTQELIAELDRSTDLKIAYTAKA*	mmseqs_cdd	common_virus	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0016	shell	direct	high	203	0.995	GCA_005888175.1_00995
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	9645	10043	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	9646	10044	GCA_005888175_1_28_17	GCA_005888175_1_28_17	-	208040	.	COG4382	Mu-like prophage protein gp16  [Mobilome: prophages, transposons]. 	MLRKNLIAKIHIGKSQLGLDDETYRQLLVSTTGKTSCTEMTESELQQVLNVMVQKGFKSSSHFWGNRAAPREDKKIYLAKITALLAKHGLPKEYADGIAKRSFKVDFVHWLQPWQLKKVVQMLAVYDRNRQH*	mmseqs_cdd	nonviral_gene	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0017	shell	direct	high	398	0.997	GCA_005888175.1_00996
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	10284	10532	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	10285	10533	GCA_005888175_1_28_18	GCA_005888175_1_28_18	-	208040	.	.	hypothetical protein	MTDQIYEFKQVTDILVLDDKQFERFLADFKEWFHFQKQARAEAEKLKELGLNITLADVIRWKDDDLIGVGSITIDVQKTRDY*	.	hypothetical_protein	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0018	shell	direct	high	248	0.996	GCA_005888175.1_00997
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	10537	10710	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	10538	10711	GCA_005888175_1_28_19	GCA_005888175_1_28_19	-	208040	.	.	hypothetical protein	MSEKKAQVTEQLAQIMEQIEAAKEQWLVDDSKGALLLLQAASREMESVAWRMAPVLG*	.	hypothetical_protein	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0019	shell	direct	high	173	0.994	GCA_005888175.1_00998
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	10707	10871	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	10708	10872	GCA_005888175_1_28_20	GCA_005888175_1_28_20	-	208040	.	.	hypothetical protein	MAKYVARFYCLVEAVVEAENNEQVLELCDLNVCDVNKLPHTITEIDDVVEVEEV*	.	hypothetical_protein	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0020	shell	direct	high	164	0.994	GCA_005888175.1_00999
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	10882	11079	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	10883	11080	GCA_005888175_1_28_21	GCA_005888175_1_28_21	-	208040	.	NF033650	ANR family transcriptional regulator. ANR family transcriptional regulators include the AggR-activated regulator Aar. The name ANR (AraC Negative Regulators) refers to an effect on, rather than homology to, certain AraC family transcriptional regulators.	MNKNIHKFDRFKYYSEQAANSERRGELQDAKAQWAIAELNAPNARNQEWCKHRAAFCDRVLRKPF*	mmseqs_cdd	nonviral_gene	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0021	shell	direct	high	197	0.995	GCA_005888175.1_01000
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	11266	11883	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	11267	11884	GCA_005888175_1_28_22	GCA_005888175_1_28_22	-	208040	.	pfam11363	Protein of unknown function (DUF3164). This family of proteins has no known function.	MKQMIEGKEYWRDARGNLTPAELVKDIDKARDVLVREWVEKGVSLNKEMRNFKDGIFGDIQAFIELSAEKYNAKMGGSKGNITLYSYDGKYKIQRAINDHLQFDERIQAAKVLIDACLNEWSEGSRPELKALIERAFNVDKEGNLNTSRILGLRRVDIQDERWQNAMQAISESVQVVSSKAYVRLYERVGESDQYVPIALDVAGV*	mmseqs_cdd	nonviral_gene	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0022	shell	direct	high	617	0.998	GCA_005888175.1_01001
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	11884	12075	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	11885	12076	GCA_005888175_1_28_23	GCA_005888175_1_28_23	-	208040	.	PFAM:PF04936.11	host-nuclease-inhibitor	MATRRQIYAVYRGEENLGDGTAEELAKKLNVSEKTIYSSATVARCKRDKGKRLVVIKLDKEEL*	phrogs_hmm	hypothetical_protein	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0023	shell	direct	high	191	0.995	GCA_005888175.1_01002
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	12084	12380	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	12085	12381	GCA_005888175_1_28_24	GCA_005888175_1_28_24	-	208040	.	.	hypothetical protein	MLQPNTTKQLNKNNAVMLAYLEQVEKAVRRLNEMGLTVINVHFEKIRPTVRVMNNAVTEKLEKDQQAYVYHVGRDVGRYQEAQFTVEGIRVVWRKYLN*	.	hypothetical_protein	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0024	shell	direct	high	296	0.997	GCA_005888175.1_01003
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	12392	13141	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	12393	13142	GCA_005888175_1_28_25	GCA_005888175_1_28_25	-	208040	.	COG2842	Bacteriophage DNA transposition protein, AAA+ family ATPase  [Mobilome: prophages, transposons]. 	MLDDKVAEYLARQDQKILKAHYNSQFVSTLAARKTMDVMQYAHTEGKIVVVYGAAGLGKTATLKEYAARYPSSMLIETDPGYNPRVLLHKIAETCGVVAQGGNHDVFKKIVEKLDGSERLLIIDEAELLSTRSLEFVRRLHDKTQIGVVLAGMPRLLVNLRGKSGEFAQLYSRVNNTHNFGNALPDKDLAMLIESALGTGEFNDAFIKFSKGNARRLSNLMSGVVRLSKLNECDITYEMIEEYNKMLIS*	mmseqs_cdd	nonviral_gene	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0025	shell	direct	high	749	0.999	GCA_005888175.1_01004
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	13087	13272	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	13088	13273	GCA_005888175_1_28_26	GCA_005888175_1_28_26	-	208040	.	PFAM:PF10078.8	transcriptional-regulator	MKNKELQRFMTNSGMTQKQIAQALSVSVGTISLYLKDQYAGDVQCLMTRWRSIWLAKIRRF*	phrogs_hmm	hypothetical_protein	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0026	shell	direct	high	185	0.995	GCA_005888175.1_01005
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	13324	13722	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	13325	13723	GCA_005888175_1_28_27	GCA_005888175_1_28_27	-	208040	.	.	hypothetical protein	MKNFIEKERKARAKRRFERAQTLIKRDWSKINDFPVWILTPSGVAPNLASQSMALDMNQGTPSYPSLQNQAHQCFVTKDEADRANRPEIEAAQVDPAQQVEQLASELKSVVQQADRLGQKVVAVSLRVEFAA*	.	hypothetical_protein	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0027	shell	direct	high	398	0.997	GCA_005888175.1_01006
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	13733	15718	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	13734	15719	GCA_005888175_1_28_28	GCA_005888175_1_28_28	-	208040	.	PDB:1BCO_A	Mu-Transposase	MNEISLKTHYPIAELLKLKLLNMPTAHKNALALFERENVEWRKRVGKGGGKEYALSSMPQALQDEIRNKFAVSIVKAKPKSLPADLRQVELKTLTEKQREVAGARMALVAQVAQLEQAQPRYKAIKFFCEQIKHGGISSDLMRLVEIANNKKGKNRTLSDRTLNQWVLDYEKADTPEERLKALAPMQRVAKKAEEIVWLPDFLAIYRQTNGINVAEAYHYFSAEWDARFADEPLRLEMKPSIDQVRAALAKLPKHIKEIGRKTGSELRALNTYVKRDWSVLQVNDVWVGDGHAMKLKVAHPEHGRPFIPEVTLIMDTSCRFIVGWSASLAENVLAVADALRYGVERYGIPAIYYSDNGGGEKNWMLDGDITGMLPRLGIKHQTGIPGNPQGRGIIERVHQTILYKIARQFETYHGTGADKDTVRQVSTAVISLDKAKRKGATQLTPKQQWAVGKLPSWNQFLQACQEGIDEYNNKHEHRELGGMTPAQKRRQLMEKMNPDDLVFVTPVEARDLFRPSTLRVAQRGWLQLFNNYYFSAKLLDVDGQKVQVMFDIHDPSQVIVRKQDGTFVCYAELDGNKRDAFPMPFVEKTRQERYARRAKLKQEQLDEINAELNPIITIEHQPDFAVLVPKVKQKIPAKPIFHNLTEKEEWEAEQAKLVNE*	common_virus_hmm	common_virus	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0028	shell	direct	high	1985	0.999	GCA_005888175.1_01007
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	15762	16040	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	15763	16041	GCA_005888175_1_28_29	GCA_005888175_1_28_29	-	208040	.	COG3423	Predicted transcriptional regulator, lambda repressor-like DNA-binding domain [Transcription]. 	MSVLSDTKKTAICDWHRADILAALRKNGWSLRSLAEAGNVSYNTLKTALDKPYPKMERLIANAVGVAPEEIWAARSRERIERNRRPVLTNKF*	mmseqs_cdd	nonviral_gene	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0029	shell	direct	high	278	0.996	GCA_005888175.1_01008
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	16216	16932	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	16217	16933	GCA_005888175_1_28_30	GCA_005888175_1_28_30	+	208040	.	PDB:2FJR_A	Repressor-protein-CI	MSKPNIYDTGFSERMTKIIEKEGVSINSFAQKLGVSPPTISRWMKGEADPTRSNLIKLAEQTGINIEWLAIGAGPKYWQNPITEEIILRGQPQPIESSNDETFSVIEDCREVRISAGGGGFNDEYKPYQTTKVEKAWLDSRRLKAEDCAMFLVSGDSMYPTLKDGEEIIVDRSKKELKDGKIFVLNNEGAMLVKKVQITYNGITLISQNTEYAPIELNVEQANNLIVIGQVVRGYRDF*	common_virus_hmm	common_virus	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0030	shell	direct	high	716	0.999	GCA_005888175.1_01009
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	17549	17959	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	17550	17960	GCA_005888175_1_28_31	GCA_005888175_1_28_31	+	208040	.	TIGR02085	23S rRNA (uracil-5-)-methyltransferase RumB. This family consists of RNA methyltransferases designated RumB, formerly YbjF. Members act on 23S rRNA U747 and the equivalent position in other proteobacterial species. This family is homologous to the other 23S rRNA methyltransferase RumA and to the tRNA methyltransferase TrmA. [Protein synthesis, tRNA and rRNA base modification]	MQEKWGKPIKLTGIEISSSAILAASHSAKILGLEHVNFQSLDAASVIENKNKNKNKNKPDLVIVNPPRRGIGKELSEFLNQIQPHFILYSSCNAMTMGKDLQHLTCYKPLKIQLFDMFPQTSHYEVLVLLERKKIN*	mmseqs_cdd	nonviral_gene	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0031	persistent	direct	high	410	0.998	GCA_005888175.1_01010
GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote	cenote	CDS	18324	18998	GCA_005888175.1	LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175.1_LNKQ01000028.1	GCA_005888175.1|LNKQ01000028.1	GCA_005888175_1_28	GCA_005888175_1_28@C0	18325	18999	GCA_005888175_1_28_32	GCA_005888175_1_28_32	-	208040	.	PRK11753	cAMP-activated global transcriptional regulator CRP. 	MSNELTEIDEVVTSSQEEATQRDPVLDWFLTHCHLHKYPAKSTLIHAGEDATTLYYVIKGSVMVSSKDDEGKEMILTYLGAGQFFGEAGLFDEGSKRSAWVKTKTTCEIAEISYKKYRQLIQANPEILMFLTAQLARRLQNTSRQVTNLAFLDVAGRIAQTLMNLAKQPEAMTHPDGMQIKITRQEIGQMVGCSRETVGRIIKMLEDQNLIHAHGKTIVVYGAR*	mmseqs_cdd	nonviral_gene	C0	18999.0	0	18999	GCA_005888175.1|LNKQ01000028.1@region_1_18999@tool_cenote_CDS_0032	persistent	direct	high	674	0.999	GCA_005888175.1_01011
GCA_005888175.1|LNKQ01000038.1@region_1_1972@tool_cenote	cenote	CDS	1	728	GCA_005888175.1	LNKQ01000038.1	GCA_005888175.1|LNKQ01000038.1	GCA_005888175.1_LNKQ01000038.1	GCA_005888175.1|LNKQ01000038.1	GCA_005888175_1_37	GCA_005888175_1_37	1	729	GCA_005888175_1_37_1	GCA_005888175_1_37_1	+	1972	.	COG3475	Phosphorylcholine metabolism protein LicD [Lipid transport and metabolism]. 	CEKHQIRYSLGGGTLIGAIRHQGFIPWDDDIDVYMHRDEYQKFINAWLHEKHERYSIGTAEDILASNTGEMTKIFDNKTKTIDINGNENKIFIDIFIYDGIPNNKKIIYTIIKKYRKRKNRFASCKKRWIRASQNSLKYTILNWLSNLLFHRMQNYLSEIQKLHPINTSENIGLLMTEYRNWNKAYMPRAYFNHVIYKEFEGRQFQVMNGYHEHLTQYYGDYMKLPPEEDQKPHHIQEAYIL*	mmseqs_cdd	nonviral_gene	NaN	.	0	1972	GCA_005888175.1|LNKQ01000038.1@region_1_1972@tool_cenote_CDS_0001	persistent	direct	moderate	626	0.86	GCA_005888175.1_01375
GCA_005888175.1|LNKQ01000038.1@region_1_1972@tool_cenote	cenote	CDS	766	942	GCA_005888175.1	LNKQ01000038.1	GCA_005888175.1|LNKQ01000038.1	GCA_005888175.1_LNKQ01000038.1	GCA_005888175.1|LNKQ01000038.1	GCA_005888175_1_37	GCA_005888175_1_37	767	943	GCA_005888175_1_37_2	GCA_005888175_1_37_2	-	1972	.	TIGR00705	signal peptide peptidase SppA, 67K type. This model represents the signal peptide peptidase A (SppA, protease IV) as found in E. coli, Treponema pallidum, Mycobacterium leprae, and several other species, in which it has a molecular mass around 67 kDa and a duplication such that the N-terminal half shares extensive homology with the C-terminal half. This enzyme was shown in E. coli to form homotetramers. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both. [Protein fate, Degradation of proteins, peptides, and glycopeptides]	MGNSQDFRFLTFNGYVSQNLRTATSAPIQKLQKELNVLTKFNDPKGQYLYCLNCGKVK*	mmseqs_cdd	nonviral_gene	NaN	.	0	1972	GCA_005888175.1|LNKQ01000038.1@region_1_1972@tool_cenote_CDS_0002	.	unmatched_CDS	none	0	0	.
GCA_005888175.1|LNKQ01000038.1@region_1_1972@tool_cenote	cenote	CDS	1102	1518	GCA_005888175.1	LNKQ01000038.1	GCA_005888175.1|LNKQ01000038.1	GCA_005888175.1_LNKQ01000038.1	GCA_005888175.1|LNKQ01000038.1	GCA_005888175_1_37	GCA_005888175_1_37	1103	1519	GCA_005888175_1_37_3	GCA_005888175_1_37_3	-	1972	.	CDD:TIGR01635	phage-virion-morphogenesis-protein	MIEIEINNAQEIASALERLAQATAHRAPLMRSIAGTMESAVAQNFEVGGRPAWKKLKIRQGTPLVDTENLMASITSEYNNNEAIVGTNEPYAAIHQFGGKAGRGRKVAIPARPFLILTPQDEADILEDIQDYFQRLIN*	hallmark_hmm	common_virus	NaN	.	0	1972	GCA_005888175.1|LNKQ01000038.1@region_1_1972@tool_cenote_CDS_0003	persistent	direct	high	416	0.998	GCA_005888175.1_01376
GCA_005888175.1|LNKQ01000038.1@region_1_1972@tool_cenote	cenote	CDS	1642	1971	GCA_005888175.1	LNKQ01000038.1	GCA_005888175.1|LNKQ01000038.1	GCA_005888175.1_LNKQ01000038.1	GCA_005888175.1|LNKQ01000038.1	GCA_005888175_1_37	GCA_005888175_1_37	1643	1972	GCA_005888175_1_37_4	GCA_005888175_1_37_4	-	1972	.	.	hypothetical protein	AAGVLSAESKDLLKSKTGTVWLSDDTLIKQFNSRDGQDFGIDEYESLPDIINALEHLLQVKDFADRYTFIRQGKMLVVKILPKEIFVLSFRRIKDKELKKLLEKDYALR*	.	hypothetical_protein	NaN	.	0	1972	GCA_005888175.1|LNKQ01000038.1@region_1_1972@tool_cenote_CDS_0004	.	unmatched_CDS	none	0	0	.
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	1	539	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	1	540	GCA_005888175_1_46_1	GCA_005888175_1_46_1	-	27417	.	PFAM:PF06992.10	Replication-protein-P	MANSITENQINTLPPERAQRAEETINWLFQELKSIFLGWRAAFETEADYLSAKKTWLRVLVREKITRPQLENGLYKAENSLDKFLPSVGLFVFWCKAYDYHALGLPNEAELYQRYNTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKTIPKLLTEAAEKVRSNFPFEDIP	rep_hall_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0001	shell	ambiguous	low	15	0.028	GCA_005888175.1_01596
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	524	1354	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	525	1355	GCA_005888175_1_46_2	GCA_005888175_1_46_2	-	27417	.	PFAM:PF06970.10	replication-initiation-O-like	MHAQAKYIKRILWRYEMSVELMTKAFKSKTGNPLTKLVLVKLADNANDDGVCYPSYKRIAIQCEVSRPTAISHVKKLEAMKYLSIRERKTENGNATNVYILHPENWEEVEPFTSKPALPPLVNELNQPSKPALPPLVNELNPEPSIEPSDNHHIKKTTQKSEAEMLLEQFGITGQLAKDFIAHRKAKKGVINQTQLNRLQKQADKAGISICEAVEICIERNWQGFNASWDWRDEKLRPNSPHLGQSHPNKPKFDDTQTGWSAGMNFTVDGTQWQIP*	phrogs_hmm	hypothetical_protein	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0002	shell	direct	high	830	0.999	GCA_005888175.1_01596
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	1308	1541	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	1309	1542	GCA_005888175_1_46_3	GCA_005888175_1_46_3	-	27417	.	pfam14090	Helix-turn-helix domain. This helix-turn-helix domain is often found in phage proteins and is likely to be DNA-binding.	MENTNPNEKISQSQCDRILRYLQSGKRLTSLEALDKFGCLRLSARILDLKNRGHQISDEFVHDARTGKVYKAYFMAV*	mmseqs_cdd	nonviral_gene	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0003	shell	direct	high	233	0.996	GCA_005888175.1_01597
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	1587	2039	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	1588	2040	GCA_005888175_1_46_4	GCA_005888175_1_46_4	-	27417	.	pfam06892	Phage regulatory protein CII (CP76). This family consists of several phage regulatory protein CII (CP76) sequences which are thought to be DNA binding proteins which are involved in the establishment of lysogeny.	MNSKDIQRTLHRDCKNASGGITTLALTLGKSPNILGNKLNVECENNHLSFIEALDLIEITNSTRTVAAIADKIDHLIVPMPKCASCCADVVQGFLDITTNAGKIGEQIKSAVHPNSDLGRELSNKEKQTISASIDALIESALCLKWELEQ*	mmseqs_cdd	nonviral_gene	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0004	shell	direct	high	452	0.998	GCA_005888175.1_01598
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	2083	2289	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	2084	2290	GCA_005888175_1_46_5	GCA_005888175_1_46_5	-	27417	.	pfam15943	Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	MINKTIKIAIDECGGQAKLAKLCSVAQPTVFAWLHRGGISGKYIPLIAKASNGKVTETDILRSLTKSQ*	mmseqs_cdd	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0005	.	unmatched_CDS	none	0	0	.
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	2423	3391	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	2424	3392	GCA_005888175_1_46_6	GCA_005888175_1_46_6	+	27417	.	PDB:2FJR_A	Repressor-protein-CI	MTTLGERLKFLLIERNVTQAELAEMVGTTQGAISNIVKGETQKPRNILEIANALGVDPNWLKYGSTKMTTLSERLKALLVEKGINQTEFANMIGIAQPSMQKILAGETRNPRKIVEIAKELGTTPDYLLYGDMTVSHSTLENSQINNNQGQTVNNFFDSGSDELREMLQKQQVSLKTKPTEEWVFALDVNRLAETDIINAHFPRPFEALHLSQDGMMDLLKLRSTANVAMITMFNESMSPVINKKDLMFVDTTCKQYAGEGIYLFVMNNELYVRRLYQTPSGVLNVVAENERVGSSFEIDDLSRLNVLGRCVRKFSIIAEDL*	common_virus_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0006	shell	direct	high	968	0.999	GCA_005888175.1_01599
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	3642	3803	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	3643	3804	GCA_005888175_1_46_7	GCA_005888175_1_46_7	+	27417	.	.	hypothetical protein	MIKYTPKHQVKVGGKMSEKDAGIVGNKLANSAIIASIGFAVGFILIGLGYFLK*	.	hypothetical_protein	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0007	shell	direct	high	161	0.994	GCA_005888175.1_01600
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	3814	4140	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	3815	4141	GCA_005888175_1_46_8	GCA_005888175_1_46_8	+	27417	.	PFAM:PF05106.11	holin	MPTKDPTNWESFLRWLPLVFIGLFAGVAKYASDIQAGKLHFSVGLFLCQVLVSMFAGWIGGLICLSSGLDSDLVYVGSGLSGYGGGAVLNAIWRGFFASKLGIKDEQV*	phrogs_hmm	hypothetical_protein	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0008	shell	direct	high	326	0.997	GCA_005888175.1_01601
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	4127	4531	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	4128	4532	GCA_005888175_1_46_9	GCA_005888175_1_46_9	+	27417	.	PDB:2MXZ_A	L-alanyl-D-glutamate-peptidase-endolysin	MSKFKLSAASEEKLVGVHADLVKVVHRAIELSVVDFKVIEGKRTLERQKELFAKKATKTMNSRHLTGHAVDLVPLPVNWNDREPFKTVASAMFQAAKQLGVAIRWGGDWNMNERSDDERFYDGPHFELLRSVYP*	common_virus_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0009	shell	direct	high	404	0.998	GCA_005888175.1_01602
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	4528	4917	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	4529	4918	GCA_005888175_1_46_10	GCA_005888175_1_46_10	+	27417	.	PFAM:PF10828.7	Rz-like-spanin	MTWWLFVIKKLGLNVLSHGCKHFNKVVAVFAGVFILALLYMQHTNKLNIERQSAVIDSLHEKVIKRDKIIDELHEDVDEQRKIAEKRLAQEQLIREQSYAQIQSIKKILESNQCSRATLPSGVAAELRK*	phrogs_hmm	hypothetical_protein	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0010	shell	direct	high	389	0.997	GCA_005888175.1_01603
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	5131	6489	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	5132	6490	GCA_005888175_1_46_11	GCA_005888175_1_46_11	+	27417	.	PDB:1Z6A_A	Helicase-of-the-snf2-family	MMNKDLNIEYISTDVLKPYVNNSRTHSDEQIDQICESIEEFGFTNPILIDENNGIIAGHGRLLAAIKLNLYTVPTIRLTGLSDIQKKAYVIADNSLALNAGWNFELLSLELNELKDLGFDIDLLGFDDDFLKSLDGDLLADISGDSNSKEKLDLKQAFLAPPFSILNSREGWWQDRKRKWKALGIDSGSGRDSGMQRGMNSMARYNSKEDTSMSESDDSIFDPVLCEILYSWFSPKGCQILDPFAGGSVRGIVASKLNRNYIGVDLRAEQIEANLKQRNLVCSNDELQPIWICGDSINIDKLANGVSADLVFSCPPYADLEVYSNNPNDLSNMDYDNFKKAYFEIIKKSCDMLKDNRFACFVVGEVRDKKGNYYNFVGDTIQAFLEAGLSYYNEMILVNVCGTMPMRAATPFKGSRKIGKVHQNVLVFVKGNPKIAAEYCGDVDVYIPNEDN*	rep_hall_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0011	shell	direct	high	1358	0.999	GCA_005888175.1_01604
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	6486	6707	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	6487	6708	GCA_005888175_1_46_12	GCA_005888175_1_46_12	-	27417	.	.	hypothetical protein	MMKKIDVLKDLMAKNEWKKAISLASKFPRLGNAKDAIKSAQMAYTNPNFVRQIKKDPDKLIYQGIQALIAKYG*	.	hypothetical_protein	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0012	shell	direct	high	221	0.995	GCA_005888175.1_01605
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	6765	7133	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	6766	7134	GCA_005888175_1_46_13	GCA_005888175_1_46_13	+	27417	.	PFAM:PF07141.10	Small-Terminase	MSKKKTKPKIEIDLSMVESLAAQGLTNQQIADSLGISERTLQNRKKDNAEFAEAIKKGKAKGIAVVTNALMKKIKSGNVTAMIFFLKTQGGWKENNQLEIEMKKEKKLPTLAELFGDETDPD*	hallmark_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0013	shell	direct	high	368	0.997	GCA_005888175.1_01606
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	7114	8463	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	7115	8464	GCA_005888175_1_46_14	GCA_005888175_1_46_14	+	27417	.	PDB:4IDH_A	Large-Terminase	MRQTLIKPLKPMIKPCRYKILYGGRGSGKSWGVAQLLVEIAVRTKVRVFCGRELQNSMSDSVIKLIADTIEDLGYLEDFEVQRNAIYCLKTGSEFMFYGIKNNPNKIKSLEGIDLVWIEEAENVSNESWDILIPTIRKERSEIWVTFNPKNILDPTYQRFVIAPPKNSFVRKINYDENPYFPETLRLEMEECKERDYELYRHIWLGEPVADSDKVIIKPVWIECAVDAHKKLGFLPAGRKIVGFDVADDGVDSNANAFVHGSVVLRVDEWRGEDVIGSADRTRLNALEFGANEIVYDSIGVGAGVKAHYHRLDDKSIRINGFNAGGAVFEPDAEYVYGKTNRDMFANIKAQAWWCLRDRFYKTYRAITYEEQYPVDEMISLSSDIRDLEYLKAELARPYVDYDGNGRVKVESKKDMKKRGIPSPNKADALIMCFAPKEDVLSRFIGLGS*	hallmark_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0014	shell	direct	high	1349	0.999	GCA_005888175.1_01607
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	8465	9781	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	8466	9782	GCA_005888175_1_46_15	GCA_005888175_1_46_15	+	27417	.	PFAM:PF06381.11	Portal	MEFNQDGYAEALGINHFARNSANSTALFDLTLYELGGLAARVVDMPADAAISRSIEIQGDQDDAISNEIERLKILPALADMVRWSRFFGGAVMVLLTDDGARLSEPLEPSRITRIDEVRVFDLSQISPTANRYSDPTKPNYGRYSSYRLNIGTIAGSLDSQVEIHESRLLFMGGDSLPERLKNGLHWIGRSAVRSVYPKIRDYQKSLMWASLILERKQQAVHKMKGLALAIDNGLEPVIRERINLVERGRSLLNGVAVDSEDDYNILNADLGGIVDVLDEFKVAISADVNIPVAILFGQSAKGMNATGQSDFESYYDLVESIQQHKIKPVLEKLIELLMFQKHIKPFENWKIKFPSLNTPTDKEIADVRKTNADAAKIELDRLINLVDSGALSTDELRTQIAGEFGIQADKLPQVDDDDVEKYQEEQKAKGVVVSSRN*	hallmark_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0015	shell	direct	high	1316	0.999	GCA_005888175.1_01608
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	9762	10979	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	9763	10980	GCA_005888175_1_46_16	GCA_005888175_1_46_16	+	27417	.	PFAM:PF04233.13	Minor-capsid-component	MFPHAIEREYVGYLRGVARNINTMVNQKFVEIRPHFKANIRQDSFSDTLERWLIELLQAVLIFVDEKEITQFVRGYIHQTANFNGKQFHKVLKSVYSVDVFTTEPWLDDALKIAEWENIRLIKSLPTQTLEKLRSRFTQAVRGGWRWESVVDDVKSILNTNEKRATLIARDQIGKLNSHLTKLRQQNIGVKSYIWRGMLDERERAHHVDREGKQFDWDNPPDDGHPGEPILCRCYAEAVFPEFEDLGRDDAEPIDPISTIKTGKMNLDELFDNSLSGGGNKSFSNFGSVGPALVTLAKESIGLDISGWQHSIDESSIRHILKQHGNEKAENKRGQRAVTKADILMLPQIVSSFDSIDYTGTSDAGSETFLLRKEIGDEIFCVQEVRKRHKKIAVKTMWIRKKKKP*	hallmark_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0016	shell	direct	high	1218	1.0	GCA_005888175.1_01609
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	11105	12178	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	11106	12179	GCA_005888175_1_46_17	GCA_005888175_1_46_17	+	27417	.	PFAM:PF09979.8	head-maturation-protease	MVMRYDRRGIQARRDDNGFIYDTPILTRSGVFVYELPNGKTRREYRPPDEVFKADSLRAYKGLPITEDHHGLVTKNNAHLVVGSILTEGKQDGQNLTADIVIHNTKAVDFGKKELSVGYKVDIDETSGTTEDGEPYDVIQRNIRPNHLAIVTVGRAGNAALNLDAADAVEFNEDGENPMSNTQTTLSDIRLDSGITYQAAPEVIVELNKLKQDAKDAVTAKDKEAARADAAEAKVKELETQVEQIKQDAVSQAKVRVELENVAKVHKVEVKADSTDRALREAVIKAIRQDNADLSQKSDGYIEAAFDIAVSDAKQRADAAGVQRQQLTPSATNQPTFTQDSQTKLTGRAAMIASRNQ*	phrogs_hmm	nonviral_gene	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0017	shell	direct	high	1073	0.999	GCA_005888175.1_01610
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	12191	12610	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	12192	12611	GCA_005888175_1_46_18	GCA_005888175_1_46_18	+	27417	.	PFAM:PF11133.7	virion-structural-protein	MSMYDQLQQKAFAGMKGDSRYDLVETFAAENEIPFGVVITQGTSATQAKLGGTKPIGIALHSHAVVGGYAKFDAVSVLRKGVAWCVVKDGETITAGSAVSFDPASGKVAKTGTALPNATFKTAVVDCGKYGKLALVELA*	phrogs_hmm	hypothetical_protein	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0018	shell	direct	high	419	0.998	GCA_005888175.1_01611
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	12672	13619	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	12673	13620	GCA_005888175_1_46_19	GCA_005888175_1_46_19	+	27417	.	PDB:8HDT_C	Major-Capsid-Protein	MTDIRQDAFELNAINTCLNAVGVFNQDAGLFTQRQLEFVRNKIYEEKLPGMNGLSLVPVSSEAPEWAETVTERIYDMVGMAKVIANYADDLPRADVAMTERAVKVKNIGAAYGYNLQELKAAAANQTDLPSSKARAARRAVEVKMNEIALLGDKEFGLNGFINHPNLGETSVTGSWKTATADAVLADLDNLHDTVVLQSKGVHQPTHLLLSLTDYQTLSSKYMNTADKVDVLTFFKRKHPNLTIQGLWELEKAGTGNKNLAICYEKSLDNLTLETPQDFTQLPAQERNLELVVNCVARVGGVFLRYPLSATKAEI*	hallmark_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0019	shell	direct	high	947	0.999	GCA_005888175.1_01612
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	13622	13810	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	13623	13811	GCA_005888175_1_46_20	GCA_005888175_1_46_20	+	27417	.	.	hypothetical protein	MIVRNIEARLIRVGGEFIAPNQEVEIADDAVGLDRLIERGVLIDVTPKAEEPKKDGKSKKQE*	.	hypothetical_protein	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0020	shell	direct	high	188	0.995	GCA_005888175.1_01613
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	13814	14164	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	13815	14165	GCA_005888175_1_46_21	GCA_005888175_1_46_21	+	27417	.	PFAM:PF13262.5	head-to-tail-adaptor	MSAYSLLNLFYPLSQQMPEDIVNKALSVADNKRPDCLSDEKQDEAVAWYAAYLLAQSIESGVNAAGLRREREGDLEREYFSSSDKGGNAERFLAKYNELNNICVRLGAITVGSHCV*	hallmark_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0021	shell	direct	high	350	0.997	GCA_005888175.1_01614
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	14157	14615	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	14158	14616	GCA_005888175_1_46_22	GCA_005888175_1_46_22	+	27417	.	PFAM:PF05069.12	Virion-morphogenesis-family	MSSVVKVKINNKGLEKELELINKIGKARVKVGVQADAGVHSESGESLVDIGIWNEYGTAHIPSRPFIRQTFEDNQQAVAQYLGRVVENVAKGADLVQELSKLGQWYQDKQKKTLKSYPWTPNAPSTRKRKKSSKPLVDTSQLVNSIRYKVEI*	hallmark_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0022	shell	direct	high	458	0.998	GCA_005888175.1_01615
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	14615	14974	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	14616	14975	GCA_005888175_1_46_23	GCA_005888175_1_46_23	+	27417	.	PFAM:PF10665.8	Minor-capsid-protein	MQVFSSQSSFRKPYKILVRSDGEYVKGKWVKGGEIEQMLMASIQPLNGAEMDRLVVSMQGRRVSSAVKIYTDQKLTVAGENAHNGTVVLFDGERYEVISRASYHSGVLSHHRYVAIRVK*	hallmark_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0023	shell	direct	high	359	0.997	GCA_005888175.1_01616
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	14976	15485	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	14977	15486	GCA_005888175_1_46_24	GCA_005888175_1_46_24	+	27417	.	PDB:5A21_G	tail-completion-protein	MLERLYDLLGDLSDRPFIRAYENGREPEKPFFTYELKFERTPEHFHYSAVNDEGNQTVKTHIDAVLELNYFGGNSLQALRDVCMRLSMQSCRERWLNDGVALIRIGRITHLAFLNEQREYEDRAMVEIEIRYAASVQDIVGIIEQVEVTANIGRASEKNLIGVNKNGEN*	hallmark_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0024	shell	direct	high	509	0.998	GCA_005888175.1_01617
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	15472	16545	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	15473	16546	GCA_005888175_1_46_25	GCA_005888175_1_46_25	+	27417	.	PDB:3J9Q_Q	tail-sheath	MAKIDRLVNVAIDLNTTTIAGKSFSDLLILGEHTLNNSARLLVVTDPNELLDLGLKSNNPLYIAVATAFAQPSHVAQVFIGRKAQDESVTDALAAVARENNSWYGLALVSREDSDVMLAAAWAETNGKLFVTASADEKLPQSAEKTDIASKLEAKQYYRSAVMYSHKATEEYPEIALMSYSFTFYPGSETWNLKKLAGVSYSPLMEGEYLACAKKNATTFEKFNDSFAVTQGGKVAAGEWIDIIRFRDWLVQEVQINVTSVLINAYGKVPYTDKGIQLIGAAVRQALDLGVARGGIAPTELDDNNKEIPSYVISLPLAAKVSNNNKGKRLLQDVKFSARLAGAIHLTEIKGNLAYSL*	hallmark_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0025	shell	direct	high	1073	0.999	GCA_005888175.1_01618
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	16591	17016	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	16592	17017	GCA_005888175_1_46_26	GCA_005888175_1_46_26	+	27417	.	PFAM:PF11681.7	virion-structural-protein	MALATYAPDEVSIVIGAVIVSGFADGTFIDIEEMSDGVSSVAGADGEVARATSADPRKKVTLTLLQTSDTNDVLSELYAADKVSKNATFPIAVKDLRGRSLFAASTAWVVKSAKLELGKEVGSREWTLETADGKLFVGGND*	phrogs_hmm	hypothetical_protein	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0026	shell	direct	high	425	0.998	GCA_005888175.1_01619
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	17016	17498	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	17017	17499	GCA_005888175_1_46_27	GCA_005888175_1_46_27	+	27417	.	PFAM:PF10876.7	Tail-assembly-chaperone	MARSEIQIGESTFFVQKFSVMDQLRIFGDLQKTLIPSLAKVIGFSDEKPKDATSAQLAELAQKSAANFAQGLQDLSQQLSGAELVKLADMLIKPELVTVQRDDFNNGTDKKLSKTDFDLVFDDMSELIELVIFILQLNFSSFFTKFLARLGSVQELVKKS*	hallmark_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0027	shell	direct	high	482	0.998	GCA_005888175.1_01620
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	17534	17686	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	17535	17687	GCA_005888175_1_46_28	GCA_005888175_1_46_28	+	27417	.	.	hypothetical protein	MIAWRPFLAGKVTLTELNTAGLTDMGELLKINRLLDAVDAMEAKQMEKNR*	.	hypothetical_protein	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0028	shell	direct	high	152	0.993	GCA_005888175.1_01621
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	17683	20100	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	17684	20101	GCA_005888175_1_46_29	GCA_005888175_1_46_29	+	27417	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MNAIRELVTLLRYKVDNSGLKAYVVQTQQAAKGIRSNLNNAVDGLRAKFSEAAVSAKGVGNNLNDAKNQMLSLRNLVAGYFAMIAGGNVIKIADDWAAVDSRVKLATKSAEEHKYALSQIFDLSQRSGQDYLASADLFSKVNRSAGDLGLSLDDTLNLTEIIGQTMTIGGGDQGAQQAALMQLGQALGSGALRGDELNSIIEQAPRLANAIADSFGVPIGQLKDLGKEGKLTSKELAQGLLKQADKIQKEFDQMPKTFGRGMTILKNKAGQLIDVAVNKVSKLGAAFYNAAEWVTENIRLVGFLAGTVIGGKLMFALAAAKKSLRQLLMMGARAVAPYLAMAAAAGVVALVLEDIYGWTQGDLSFTGALVGRYEVWADKFAALGKLADKLWINVRGLLKDLSRMAGVEINFDSWQAFATDVLEYIIAAVRNLINTVSGMVRIIRALINGDYAGAWSSAGDMIDGLSLKFLPLYSVGLMVLGGILSAVWALFSPFRAFFGLLKGGFRSVMFVAKPFIKVAKGIASPFIWAQKHFKLFSRVGSGAFSLLKRAAVKFTVYGLKAFKWLAIKGINGFFGILRAAVKFGMIFKSVVGTVVKGIFAIGRAMFMAVASNPILLAISAVIGLVILLVVYWDEVKAFAIAAWEAISKKAAEIWQSIITGASEMWDNITNKAAESWDNVKKDAVEKWNSVTTMFKNAWQKSIDTVVGWFNSLIPSWIRDLFSDGAKAEVKLSGEALTTPVSGHVSPQRLGYGGRPIFAPNQNMTQTNNFNIQGSANPSGVANAVSDKLSRGSSTSFGMGAIEYAG*	hallmark_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0029	shell	direct	high	2417	1.0	GCA_005888175.1_01622
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	20175	20771	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	20176	20772	GCA_005888175_1_46_30	GCA_005888175_1_46_30	-	27417	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MNTQIQFSTFNFKDLPVRVISDPKGEFWFCGTDVCAILGYTNSRKALQDHCKQGGVTKRYTPTKSADQEMTFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQLALPMVNDDFKQAMAKMVTYASQYANFQQAITSAQLEKQKRLVEFFFSSIPNGDSYLFVFNKNIQQDIQQASDLLHKLITQ*	common_virus_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0030	shell	direct	high	596	0.998	GCA_005888175.1_01623
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	21059	21640	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	21060	21641	GCA_005888175_1_46_31	GCA_005888175_1_46_31	+	27417	.	PFAM:PF06995.10	tail-fiber-protein	MSIVNLLFSALSGKRTTIGVLELDALLTENTSLSSQITEYPIEDGTVISDHITRESERLSLSGVITGAGTLFNVGLGKYKLIAAKETLRELHAKRELVTIVTGLDVYEDFAIESLEIERNSDDGERLNISAEFRKIQKVTLRKEEIPPEKAAPNAKGKAGQTKAKTGKAQTGKPTNTQAQKITKLGEWSGKKQ*	phrogs_hmm	hypothetical_protein	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0031	shell	direct	high	581	0.998	GCA_005888175.1_01625
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	21637	21951	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	21638	21952	GCA_005888175_1_46_32	GCA_005888175_1_46_32	+	27417	.	7KH1_B4	Myoviridae, Phage, Baseplate complex, VIRUS	MITINLANKNDFITEVNLDDEVFFLHFSWNDTIGFWSLTIENTYNDELVSSIVILPNRPLIAPVRRDELPLGELIAVRDDNLQTIGRDDFINGKAVLIYIGVDE*	hhsuite_tools	hypothetical_protein	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0032	shell	direct	high	314	0.997	GCA_005888175.1_01626
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	21948	22910	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	21949	22911	GCA_005888175_1_46_33	GCA_005888175_1_46_33	+	27417	.	PDB:1WRU_A	tail-protein	MSYRFLRSYKLMIGKKGQKDAIVIEPPMRIEFDIEKDCEAEPNENTIKIYNVASTTRKTIEQPDMRCVLYAGYEQEGNVLLCSGDIATAYSYHQGADWVTELYVLDGLVEIRDTAVSLGYGGGVSSTQITNDIAAKMGVTVVGADNLKSRTWANGFSFYGAARKALDKVVAGTGLEWSIQNSELQIVNRNGVTKRSGYVLAKDSGLIGFPERTREAARSKKQDTPNKKQDEKFAFDRQARDGWNVKSLLLPMVNPCDKIKLESVTVTNWFRVEKIKHSGDSHSGDWQSELHLVDLNAPTKEQMKAQSKHRKKRKKKDEQK*	hallmark_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0033	shell	direct	high	962	0.999	GCA_005888175.1_01627
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	22907	23578	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	22908	23579	GCA_005888175_1_46_34	GCA_005888175_1_46_34	+	27417	.	PDB:4RU3_A	phage-baseplate	MTDILTALSEINVSLPGKIVSYDAGTVRATVQPSIPKRLANGEVLNAPQIVNVPVMFPMADINGAVAQVTLPVKVGDGCLLIFSQRSLENWLSGSNDAPDDPRMFDLSDAFCVMGGNSHSPNADVENLCIKYGSGKIKIAPNGNITINSPDVRVTTDNFTVTAPTSTFNGNVIVNGGISTAGDSGSVSVSGSLTTTGDVMADGVSLQSHKHKGDSGGTTGAPL*	common_virus_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0034	shell	direct	high	671	0.999	GCA_005888175.1_01628
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	23575	23940	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	23576	23941	GCA_005888175_1_46_35	GCA_005888175_1_46_35	+	27417	.	PDB:5IV5_BD	Baseplate-wedge-protein	MIDLKLSGQHDLMIKDRKLVLVDGVNQKAQQIKVVLLTFLGEWFLDTTIGLPYFDEILTKNPDNARIQSIFRKKIMGVKGVLAVERLSLEFHLKDRVLAVQFSARTNEGVVKDKVSIKRNG*	common_virus_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0035	shell	direct	high	365	0.997	GCA_005888175.1_01629
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	23933	25369	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	23934	25370	GCA_005888175_1_46_36	GCA_005888175_1_46_36	+	27417	.	PDB:5IV5_GD	Baseplate-wedge-protein	MANYGLTRSGFVRKRMPEQLKELYENAKKMFGEDIDLSPETVMGMMLNIESERFATLWELIESVYSAMYPMSATGANLDRAVSFTGVTRLQAEHSTVPVIFYGNAGVEIPQYTAVRNAATQTLYYSDEDARIDSNQAAYARIELNSNTINVGDVFSVVVNGVTYRFTAMRSSSASIIQGLANQLKAISYADVSNDNVIIEISAQSIPHFSISVSQNLTLSRLGVRCMLSTESPSEDKADIGQMIELVNMIDGVVEVNNVVEGASGRLEESDIELYQRYHRGVWQNGAGTIDSLYANLSKVAGVHSLRIYENDADQTINGIPKRSLYAVVKGGLDTDIASTLLKFKPLGIGTHGQTEVTVRDSQNQPHLIKFSRPTKCYIWLKVTIETFVDEDEIARAGYIVSALNNILKYGKSLGVGADVIHQRLIAACIAVQGVGKVTVQIGKTNNITDPEPRYQEQNITIAPDEEAIFDPSIIVMS*	hallmark_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0036	shell	direct	high	1436	0.999	GCA_005888175.1_01630
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	25378	25992	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	25379	25993	GCA_005888175_1_46_37	GCA_005888175_1_46_37	+	27417	.	pfam11041	Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	MKDILTALNDDFKQLGRERLLSQFNYSPNLNAFLSLLLLPHHEIQATLKQMLTERHIDTAIGKQLDGVGDIVGMPRPFARVNGDWYFGFSGQSKAKPFSRAPIRDLATQTNSRDFNYMLDEHYRRLIKWKVIANHSHGTLDDVIEACRAIFLAERVSITEGQDADVHITITRMAKNRLDAVEQEPVLWIPTAAGVKVTVEFINA*	mmseqs_cdd	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0037	shell	direct	high	614	0.998	GCA_005888175.1_01631
GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote	cenote	CDS	26002	27414	GCA_005888175.1	LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175.1_LNKQ01000048.1	GCA_005888175.1|LNKQ01000048.1	GCA_005888175_1_46	GCA_005888175_1_46@C0	26003	27415	GCA_005888175_1_46_38	GCA_005888175_1_46_38	+	27417	.	PDB:1OCY_A	Tail-fiber	MKLKLIDLFKRITWAKNGDLTDFSQTNYEAGWAHLGDDTPTVQDFNYVQQMNDKKDQWLFNQLKAVLEKANIEPTEENVNSLRDAILALSKGYSHPKSLTADTVNFVDEQGHTHEIAKATLQQQGITQLYTGYNSQREDLALTPKTAYQLKQLIDSNTRSLDNVIPNSKKSSAVNSNSADTVANSAAVKTAYDKAVEAKTTAESKVGLRGNESIQGTKSFESKIIGFRGIGVADSQTYANANHLLNMGANDGDGWIEYKKSNRVIGTIRIRANGELSYNNQKIYHAGAKPQFNTDIEGKPNTLAGYGIGNFKVEEFRGNLNTLKTDGIYAITQASRSQNLPVSTSCHIQVIAGGDGAWCRQLAYVAYSTDVYERHQTSYQTDSWSAWKKLNTDGIPTGAVVSFPRAVTNPVGFLKASGSTFNQQTFPDLYRVLGNSNKLPDLTRSDVGMTAYFAVDNIPTGWIAFDSIRTT	hallmark_hmm	common_virus	C0	27418.0	0	27418	GCA_005888175.1|LNKQ01000048.1@region_1_27418@tool_cenote_CDS_0038	.	unmatched_CDS	none	0	0	.
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	2	676	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	3	677	GCA_005888175_1_60_1	GCA_005888175_1_60_1	-	27390	.	PDB:2FKK_A	Baseplate-protein-	MALVNKPDESIFASSAKQGEVDNFPDLLRGWGITLDQTQGIPPMEWFNFLFKRLDEKHTYLMQRGLPEWSATQDYTKGSCVQFNGISYRALKNSKNNSPNESDSQYWVRWGFALSEIARATLQQYGIVQLSSATNSDSETEAATSKAVKTAYDKAVEAKTTADGKVGLNGNESINGEKTFENRIVAKRNIRISDSPHYASRGDYLNIGANDGDCWFEYKSSNREI	hallmark_hmm	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	686	1261	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	687	1262	GCA_005888175_1_60_2	GCA_005888175_1_60_2	-	27390	.	pfam11041	Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	MGYSDLLIWQYRNKPKAVSTIKLFESIIGQGFIDLYRLQDVLNIETATGHQLDLVGKHVGQFRVINGYQLRKFFGFRNSPNALGFSQKRLGGAQWYRKRDPLSDSVRLSDDDYRFLIKCRILKNYQIGTLPNLIEACLFIFGEDCHIVDNYDMTVSISVPSASTSDFKRFAINHLDILPRQAGVQYLFNLI*	mmseqs_cdd	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0002	persistent	direct	high	575	0.998	GCA_005888175.1_01908
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	1261	2403	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	1262	2404	GCA_005888175_1_60_3	GCA_005888175_1_60_3	-	27390	.	PFAM:PF04865.13	Baseplate-J-like-protein	MAKLIETGIQIERLNEIVARFEDGFRQIYGQNIDLSPNSPDGQMVGLLAQMKMDIEELAENVYRQLDPDVATGAWLDQRVAYAGLRRRAASYSYLRSVILTGEPLTHLYAGIVVSDPHKVRWVLTADVQLDSNGSARADFRSEELGAFNLIKNTNLTIETVTLGLNSATTFENAEIGEEEETDLQLRERFFISRTKNAQNSADAIQSKIAALPDVRQVKVLENNTKQRDKYGVEPNSLNIIVDGGADEQIAHVIYENKGAGVGLQGATETTLTVNGERRALRFDRATPVDVQVSMRCVRYEDFTEVDKDEIKRLLSIQHFEIGQNLSLSRLYSPINEVGGFWVKELKIGRKGRSLTTENITAQPRELIRILATDITIEVE*	hallmark_hmm	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0003	persistent	direct	high	1142	0.999	GCA_005888175.1_01909
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	2446	2964	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	2447	2965	GCA_005888175_1_60_4	GCA_005888175_1_60_4	-	27390	.	pfam10547	P22_AR N-terminal domain. This domain was identified by Iyer and colleagues.	MQTLTAEFLGKEVTLVDNNGVAYVAMREIVEGIGLDWKGQHKKLMEQSEKFNCGHITTVAKDGKNREMLCIPIKKLNGWLFGLNPNKVRADLKERLENYQEECFLALWDYWTEGIARRDEVKNKLALWQQKKAEYTQRATERGKLLQQCKSEKQALERELLQIKQLDLFVNL*	mmseqs_cdd	nonviral_gene	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0004	shell	direct	high	518	0.998	GCA_005888175.1_01910
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	3149	3502	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	3150	3503	GCA_005888175_1_60_5	GCA_005888175_1_60_5	-	27390	.	PFAM:PF10934.7	baseplate-wedge-subunit	MSVRRLNKEHDWTFGQGFSNYASESDAIVQNVQTRLWSFANDWFLDLEHGLPWLEQMGRGVNMAGWEIKIKRYVLETEGVSRITDYQANFDTDTRKLTISIDYQDIYGQQQTARYDA*	phrogs_hmm	hypothetical_protein	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0005	persistent	direct	high	353	0.997	GCA_005888175.1_01911
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	3499	4143	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	3500	4144	GCA_005888175_1_60_6	GCA_005888175_1_60_6	-	27390	.	PDB:4RU3_A	phage-baseplate	MNYAQILATPETATDHQIQQNQLNLHTALPAKVVSFDPAKQTVSLAIQIKMQLVDGSGADIPPLLDVPVSFPRGGGFAVTFPLKAGDEGIAIFSERCIDGWWQNGSVSTPLDFRLHDLSDAMFIPGICSVPKAIGGFFTDGLSMQTLDGSTYIRIKNGSILIKGNIEHQGDTSQTGSHSSTGVISSDTDVTAGGISGKTHKHTGDSGGKTGVPE*	common_virus_hmm	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0006	persistent	direct	high	644	0.998	GCA_005888175.1_01912
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	4140	5012	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	4141	5013	GCA_005888175_1_60_7	GCA_005888175_1_60_7	-	27390	.	PDB:1WRU_A	Tail-protein	MKQFGRRWKLDISNDQETLSIEQLRVAFEIDKTINEKPNPAKIQVWNLNRDHINQLLSQDYKKVALSVGYGELRQIYAGDITKTRIQREGLDFVLTLECSDGHQAYTQSRAKTTLKAGATDKQIVEELQKTMPKVQSGAIDIPNQRKLPRGRVLNGNSRDILNKIARNNKADWSIQDGALIFLPKDKVLNDDAVLISQDTGMINAPEQTDEGLELTCLLNPALQIGGLVKVESIIEYFNGEYKIVKLAHSGDGIGGDWHSKMTVVGGKFQKVEKEKGSQTSNKQSKDKNK*	hallmark_hmm	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0007	persistent	direct	high	872	0.999	GCA_005888175.1_01913
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	5027	5206	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	5028	5207	GCA_005888175_1_60_8	GCA_005888175_1_60_8	-	27390	.	.	hypothetical protein	MSKYSKTKLKIHLKEGLEMETNASPIMRGAIAFSIVIVALGLFALCITPLANVLIELAK*	.	hypothetical_protein	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0008	shell	direct	high	179	0.994	GCA_005888175.1_01914
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	5289	5597	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	5290	5598	GCA_005888175_1_60_9	GCA_005888175_1_60_9	-	27390	.	7KH1_B4	Myoviridae, Phage, Baseplate complex, VIRUS	MLKIPLTQHPYQEQTFEFNGIKIRLTLRFNSIGQFWAMDVFESVNQKQICRGHAIACGVPLLARTTQPYFFYLDDESGAELDPMSMEDLGTRCFLYIGEKAS*	hhsuite_tools	hypothetical_protein	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0009	persistent	direct	high	308	0.997	GCA_005888175.1_01915
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	5603	6379	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	5604	6380	GCA_005888175_1_60_10	GCA_005888175_1_60_10	-	27390	.	PFAM:PF06995.10	tail-fiber-protein	MLNFAQVSNRKIGKITFDVVTTEDHQSDLFITENPIESGAAIADHAVIQPKQVTINGVMVDHDHSTFGLDLPFIGNIRGGIDFLNNFPLPVKVITQTSQSIARAGRVISQVSGAYSQAKRTLNQARIIAPFLPDFGLGGLLDSSAGDSRVQKCYADLVACQKSGETIDIQTGINLYKNMLIQSVAVNQSQDGSATFTITAREIFIVETQTAQSKSSASGKRKSGRSSIQSATKSQQGSTQPKNDTPKRTSSLFNLFKW*	phrogs_hmm	hypothetical_protein	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0010	persistent	direct	high	776	0.999	GCA_005888175.1_01916
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	6385	8475	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	6386	8476	GCA_005888175_1_60_11	GCA_005888175_1_60_11	-	27390	.	UniProt:tr|A0A0A0YSN4_9CAUD	Tail-length-tape-measure-protein-	MLLDELLIKIGIDADSQAMQQFEQFLNVIGDGTESAAENLGTFAEVLERAVDDATEQIKAAPEFESFFDSLEKLQAETENLSEDDALDEWVQKLIEGDKLLSEFGESFLQNTEQLSKELQEAGLSAEQVEKVIGKLKSAIEQKTDATEKDTKAVEDNAKSTENLSDNIIDLWATQYGAVGLLNKFELLGISINKTTLKVAAFGAAFYAATIGVKNFVDANLDALDEIKQLSAVTGESADQIYNLGKVAEVNGSSAQAAQSSIEGLSRVIGEAAAGIGRGAKSFEQYGLSAKKANGEVKTSSEMLGEISDKMKAMGEQEQIAMLAKLGIDSSMIQTLRLGNDELKEQIALASVLTLGVGNAENAKTAASFKDALTQVSQAFRAIGEYVSLRVAPSIQRLAERFTKWFTENNDFIKATLNGFGKILSFLFELAAAIDNVVEHTIGWKNLIYALGAALLWFSRRMLLAFATNPVTLIIAAIAGLFLLVDDFITYLESGETALGEFWKPFKTALLWVKSTWKNFVDNFSVDPIGETLSLITDMLELPFKLGLALVVGLWNLFTGEQLDLDVIETKFAQVTDWIKKPFQSAFDWVKGYYDQYIAPIVDTVKGWFIDSGEKVGTASQNTKAYDTMMYDPSYTSAPQVAAVGAKSQTSNADNRVTNSNNKITITQHIQGTDNPKAVADQSVRVINHQLSSVVG*	hallmark_hmm	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0011	persistent	direct	high	2090	1.0	GCA_005888175.1_01917
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	8626	9036	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	8627	9037	GCA_005888175_1_60_12	GCA_005888175_1_60_12	-	27390	.	PFAM:PF10876.7	Phage-tail-assembly-chaperone-protein	MESKQINIENVTYTMTPANAMTAWTALKNAMKLLQSVDLSSLGNNKKLGASVLTTVLANLGDTSIKELEDIVLKHTSCEQDGKLYRLSERFDSHFNQHRGHLIPVLKEGLMYQFADFFIGGGGLLSNIQPNLKATK*	hallmark_hmm	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0012	persistent	direct	high	410	0.998	GCA_005888175.1_01918
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	9036	9467	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	9037	9468	GCA_005888175_1_60_13	GCA_005888175_1_60_13	-	27390	.	PFAM:PF11681.7	virion-structural-protein	MAVFDPKQVVVLLDGKEMSDWADGSDVINATNQVDAGQMVIGANGTGVFIANPDQSGKLTLKIKQHSEDNAYLSKLFNQQKTSIKTYLPMTLAIRDLINDDVVTASKGYFTTPAAYMRGNGHNATTWTIVFEKMTMNLEKGVQ*	phrogs_hmm	hypothetical_protein	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0013	persistent	direct	high	431	0.998	GCA_005888175.1_01919
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	9712	11220	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	9713	11221	GCA_005888175_1_60_14	GCA_005888175_1_60_14	-	27390	.	PDB:5LI4_E	tail-sheath	MALSISQIVNVQLNTMPKSAARKSFGIVALFTPEAGQAFADATTRYVYVENQRDVEQLFGTNSETAKAAQPFFAQSPRAKQLIIARWQKEPATIDATKNTLSGATLSDDLERFKAVVNGRFTLTIGAETKKVNGLSFADASDFNAIATKIQAKLTALSSSLSISYDSVGQRFIITSNTSGEDKATEIHYAFNGGGDGEYIGSLLKLENGQASRKVGKASISLKKETVAEALFNVAEVNNAWYGFTFAAQLTDGEVESAAKYAQANTKMFGANVIRVEQLEWSANNIYKKLYDAGLDHTLAMFDKNDMYPASSALARLLSTNFAANNSTLTLKFKQQPTITADEITATEFSKAKRLGINVYTYFDDVAMIAEGTVMGGKFADEIVILDWFTDAVQKEVFARLYKSPTKIPLTDKGQAVLIAAVEKVCLEGVNNGAFAPGQWTGDSFGNLTTGDYLEKGYYVWAAPMDTLSDSDREQRRATPIQTAVKLAGAIHSSDVIVNYNR*	hallmark_hmm	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0014	persistent	direct	high	1508	0.999	GCA_005888175.1_01921
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	11225	11728	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	11226	11729	GCA_005888175_1_60_15	GCA_005888175_1_60_15	-	27390	.	PDB:5A21_G	tail-completion-protein	MDTTTISALDTAKLRKWIQQALQLPNGAVIGGWLPENPLPAFITVDLMMSNEIGQATREFDGKRERIIQSMQSTVSLSCFGRNSLAQCYKLKAIFQSSAFLSFLKSNHWGVIRFSDVRNLTATVGADYEERGQFDVVFSHHHIVDTPLDPIANVEQRTNHLIQQIGG*	hallmark_hmm	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0015	persistent	direct	moderate	360	0.714	GCA_005888175.1_01922
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	12020	12466	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	12021	12467	GCA_005888175_1_60_16	GCA_005888175_1_60_16	-	27390	.	PFAM:PF05069.12	Virion-morphogenesis-family	MAVQITGNLAQAKALIERLRADKDKAVYIGFPAEFDKPVEGAENFNLASLAAVLEFGNERIPSRPFLRQTLSENQEKYTALFTQLFKQGLQIERIYEQLALVAQGDVQLNIARGNWVANAKSTIKQKGSSKPLIDTGKMRQSVKGIVK*	hallmark_hmm	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0016	persistent	direct	high	446	0.998	GCA_005888175.1_01924
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	12467	12829	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	12468	12830	GCA_005888175_1_60_17	GCA_005888175_1_60_17	-	27390	.	PFAM:PF13262.5	head-to-tail-adaptor	MPTFETYVFIERYPEFKEVDYEKIDLFLSDAEMEVSQSRWGKLYQRGVLTLTAHLLRLSLWTTEGGGGANRNLASESAGELSVSYAVPTLTGTDADYQLTAYGQEYLRLRKLVGIGVMVA*	hallmark_hmm	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0017	persistent	direct	high	362	0.997	GCA_005888175.1_01925
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	12839	13753	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	12840	13754	GCA_005888175_1_60_18	GCA_005888175_1_60_18	-	27390	.	PDB:5WK1_D	Major-Capsid-protein	MSLLTYVQNGLTAVSKEISETKYPEIVFPQFVYVDQQAAVGITEKLHYGADEHGSLDDGLISTGTSTLDQVEVGFTPTRSYIVQWAKSVTWATPELEQGKLLGLALDTAKIMVLNQNAQQTLQKVAFLGHAKDTRLTGLLNNPSVEVYNIKGTSANTKVQAMDFDKSVAFFKEMFLAGMEKTKRIEAPNTFAIDLLDLAHLALTQRNNTDTTALEFLTKSLSAAAGRDVAIKALPSNFGNRVTSGKTRAMVYVNSKEHVIFDVPMSPTVLAAQPKGLLAYESGLRMAFGGVTFMEPDSALYVDY*	hallmark_hmm	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0018	persistent	direct	high	914	0.999	GCA_005888175.1_01926
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	13763	14203	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	13764	14204	GCA_005888175_1_60_19	GCA_005888175_1_60_19	-	27390	.	PFAM:PF11133.7	virion-structural-protein	MSYAYEQAPARAGELGKGNLASAKTTAEKVTGKVKAGEFVALNPTGGVKALSAKKDILAGVVLASRIRDEWPEGELVDVMHIGAGDAIWVNIASEKTVSRGSKVFVLTTGGEGKAGAIQGETDANAIETGYTVIDVKGQLAMITKL*	phrogs_hmm	hypothetical_protein	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0019	persistent	direct	high	440	0.998	GCA_005888175.1_01927
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	14216	15316	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	14217	15317	GCA_005888175_1_60_20	GCA_005888175_1_60_20	-	27390	.	PFAM:PF09979.8	head-maturation-protease	MKFTDKTTQAVTQRTITKDGFLVVPATISKVGVFDYLATELGLKEDGIKKVARTEKSLFSDETIKSFENATLTVGHPKDGVNAKNWKQLSVGVVRNVKRVGDELTAEAWIYDEQAIKTVQEHGVEQLSCGYDCDIKPSTVQDADFEMSPMIGNHVAIVAKGRCGGSVKLADEDKTIMGKTAKILDAFLGAFGIKLSDEQKKQIEDEEKSGSEEGKEPKGEQPTEPKEKQSKPEDKKDEEVNKEEFEKQLKAKDAEIQQLKDAQAKRDAEVKQAAVLADAKTAFKEVNFADNATVREIQESAVVAQGIFTKDEAAKLSDEEISGAYQTAKAVVAKLADERKSLGSILLGDAESKAAPKIDFNKTYNS*	phrogs_hmm	nonviral_gene	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0020	persistent	direct	high	1100	0.999	GCA_005888175.1_01928
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	15378	15734	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	15379	15735	GCA_005888175_1_60_21	GCA_005888175_1_60_21	-	27390	.	pfam10711	Hypothetical protein (DUF2513). This family is found in bacteria. The function is not known.	MKRNWDLIRSILLKLESQSEARGSLLPDGFTGFDSETVSYHFKLLQSAELIEAIDYSSLNEMSLIARSLTWQGHELLDKIRNDTVWNSLKTTIKSKSLDLSLDTIKQVAQTIISQMLA*	mmseqs_cdd	nonviral_gene	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0021	persistent	direct	high	356	0.997	GCA_005888175.1_01929
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	16013	17446	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	16014	17447	GCA_005888175_1_60_22	GCA_005888175_1_60_22	-	27390	.	PFAM:PF04233.13	Minor-capsid-component	MTDDVERALQQPQGSFFMDDAKGFQAISAKALMKVLEKYEKSDRTSQAENIANGFVGRGDAQNHAEVSTNLKNQTGIDLSAYLRNSPNIAERVNALTAGNIQLIKSIRSQYLDKVQNAVMQAMVRGSLNKDLTAQIKDLGKTTEKRAMFIARDQSSKLNAALTQARHEEVGIKKYMWSASLDERVRESHAEKDGQIFEYSNPPADTGHPGHDFNCRCVQIPVLDNNEQIVKNSPIVSQQEKQQMRSEWSDDFPDTIIDRKLGDATSHPLYENAKKGSIEDAYQLAKDLVTDDAVNKLKQLVGNKNAILIPVHAEEAVGQNMIPVAIATVLSKKLHIPVDLSIVQATKVSRTGGDGWHRLVYSPAFDGIVPKDKYAIILDDTQTQGGTLASLKGYIEENKGKVIASYALTGKQYSVQLRLSKDTLAELRSKYGELESWWKKEFGYDFSRFTEWEARFIINSRKTPDEVRNTILARKQA*	hallmark_hmm	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0022	persistent	direct	high	1433	0.999	GCA_005888175.1_01930
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	17475	18806	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	17476	18807	GCA_005888175_1_60_23	GCA_005888175_1_60_23	-	27390	.	PDB:8HDS_J	Portal-Protein	MNILDGIKSLALKLGSKQDQTYYARGLSLTDDLMQIEALWRDNWIANKVCIKRSEDMVRNWRDIFSNDLKSEQLDEFTKLERRLKLRETLTKALQWSSLYGAVGLLVVTDTINITSPLQPTERLKRLIILPKWKISPTGQRDDDVFSPNFGRYSEYTIIGGTQSVLVHHSRLLIINANDAPLSDNDVWGVSDLEKIIDVLKRFDSASANVGDLIFESKIDIFKIAGLSDKISAGLENDVAHVISAVQSIKSATNSLLLDAENEYDRKELSFGGLKDLLTEFRNAVAGAADMPVTILFGQSVSGLASGDEDIQNYHESIHRLQETRLRPVLEVLDTLLCNELFGGQPDDWWFEFLPLTVVKQEQQVNMLNTFATAANTLIQNGVVNEYQVANELRESGLFANISADDIEEMKNADELARNFEEPEGESTQVQASEDEQENGALV*	hallmark_hmm	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0023	persistent	direct	high	1331	0.999	GCA_005888175.1_01931
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	18808	20151	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	18809	20152	GCA_005888175_1_60_24	GCA_005888175_1_60_24	-	27390	.	PDB:4IDH_A	Large-Terminase	MSQLNIQFPTKFRPLFESIWRFIIFYGGRGSGKSFSIARALVLRAYQSPVRVLCCREIQKSISDSVIQMLADQIEMLGLQAFFDVQKTQIIGQNGSRFTFAGLKTNITSIKSMTGIDVVWVEEGENVSKESWDILIPTIREDGSQIIVSFNPKNILDDTYQRFVIHPPERCKSVLVNWQDNPYFPKELMEDMEQMRERDYELYRHVYEGEPVADSDLAIIKPVWIESAVDAHLKLGFTTKGMKKVGFDVADEGADANANAFVHGSVVLGVEVWKNGDVIDSANRTNQSAVKFKADLIIFDSIGVGAGVKAHFKRLPKSLQVEGFNAGGAVAYPEREYIKDKKNQDMFSNIKAQSWWALRDRFYKTYRAVKYGDVYPDDELISLSSKIKELEYLKAELSRPRVDYDNNGRVKVESKKDMKKRGIPSPNMADALVMCYAPTKPKSLLDL*	hallmark_hmm	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0024	persistent	direct	high	1343	0.999	GCA_005888175.1_01932
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	20138	20653	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	20139	20654	GCA_005888175_1_60_25	GCA_005888175_1_60_25	-	27390	.	PFAM:PF03592.15	Terminase-small-subunit	MSDVKGKSTSGRGLTPKQEKFCQLYIELGNASEAYRQSYDCSKMTTEVINVKASELLNKNGKITVRVEELRQAHQQRHNLTLDNIIADLQEYRDICMGRKPLTITTVVKNAQEGTAQSVNTECFVFEPTGANKALELLGKHLGMFTNKVDVTTDGKPLPTVINVTFSDEPA*	hallmark_hmm	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0025	persistent	direct	high	515	0.998	GCA_005888175.1_01933
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	20921	21298	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	20922	21299	GCA_005888175_1_60_26	GCA_005888175_1_60_26	+	27390	.	COG1396	Transcriptional regulator, contains XRE-family HTH domain [Transcription]. 	MFLLKRLKKEMNALTNIQYINNEQGVPAFAVMPIATLNWLKEKANFSDPIETGIPESVAKLALLNDYSALRAWREHLGLTQAEVASRLGISQAAYSQHENSQTLRKSTRIKIATALGINSAQLDF*	mmseqs_cdd	nonviral_gene	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0026	persistent	direct	moderate	347	0.918	GCA_005888175.1_01934
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	21300	21542	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	21301	21543	GCA_005888175_1_60_27	GCA_005888175_1_60_27	-	27390	.	PDB:5CYB_A	Lipoprotein	MLTLVCLSLFLTACTNKITTKPEYIYPLQAYTAPCVKTAFTGETYGDVVIQLVKVTAERDKCASQVDHLNKWINQAKGGK*	common_virus_hmm	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0027	persistent	ambiguous	low	49	0.202	GCA_005888175.1_01935
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	21493	21816	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	21494	21817	GCA_005888175_1_60_28	GCA_005888175_1_60_28	-	27390	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MTKYIYIALGAVVVVLIGVLRYQSSVIDELEITTKQQENTIQQQEDANKSLSLALQQERYAIIEQQERNNEIERIATENAESVKTIIKTQPCAHTRLPQSVLDRLHE*	mmseqs_cdd	nonviral_gene	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0028	persistent	direct	high	323	0.997	GCA_005888175.1_01935
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	21809	22402	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	21810	22403	GCA_005888175_1_60_29	GCA_005888175_1_60_29	-	27390	.	PDB:3WH1_A	Chitinase-	MISEETFNKIFPHAVKGVYQAISTQIEKAGCVNKMQQAMFLAQCGHESGGFTRFKENLNYSWLGLSKTFRKYFPDPLIAKKYERKPELIANRVYANRLGNGDEKSGDGWKYRGRGLIQITGKDNYAAFRKWLGRDIEPEDVAGNLDLSVKTAVWYWKCYELAELNSVEKVTRRINGGLNGIDERCKLYRALMVTDND*	common_virus_hmm	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0029	persistent	direct	high	593	0.998	GCA_005888175.1_01936
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	22380	22736	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	22381	22737	GCA_005888175_1_60_30	GCA_005888175_1_60_30	-	27390	.	TIGR01594	phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions]	MPIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPAIRYVLIDAAMCASIAGVAVPICTHLFGHTEYSSFLGTMIGFVGTEKIREFLFKFINRRIEKDDNDDFRRDI*	mmseqs_cdd	nonviral_gene	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0030	persistent	direct	high	356	0.997	GCA_005888175.1_01937
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	22932	23105	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	22933	23106	GCA_005888175_1_60_31	GCA_005888175_1_60_31	-	27390	.	.	hypothetical protein	MIKYNRTKLKIHPKEGLNMETYSTPVIRGAIAFAIVALAVGICLLFATPFISAVRWW*	.	hypothetical_protein	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0031	shell	direct	high	173	0.994	GCA_005888175.1_01939
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	23723	24622	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	23724	24623	GCA_005888175_1_60_32	GCA_005888175_1_60_32	-	27390	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MTNQISTQTVSFNNQSLITIEQNGVHYVAMKPICENIGLAWEPQVLRIKRDEVLSQGMIVMIMVAEDGKKREMICLPIEYLNGWLFGIDINRCKPEIRGTLIKYKKECYQALHDYWFNGKAERKTTVDDRTGLRNAVNMLVSKKGLIYSEAYHLIHQRFNVESIEDLTLEQLPEAVEYVHRIILEGELITEAELPNREKKYTREFTEHDLQQLVWAWFALLRGMELCQVLHPALKQIGSHYAASVYSMAYEYRSTLRHAHNVLTRITEQFECEQGNNWRVLKHLRAYNPKATGFQLDIL*	common_virus_hmm	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0032	shell	direct	high	899	0.999	GCA_005888175.1_01942
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	24784	25011	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	24785	25012	GCA_005888175_1_60_33	GCA_005888175_1_60_33	+	27390	.	.	hypothetical protein	MAIKLNENTNFTHKKTAMLSGADFRFVLRLRALIKIIMKNPLGCQGAFCNYSLLILGVRLWITTTKYDKKTCVDL*	.	hypothetical_protein	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0033	.	unmatched_CDS	none	0	0	.
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	25260	25442	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	25261	25443	GCA_005888175_1_60_34	GCA_005888175_1_60_34	+	27390	.	PFAM:PF16777.4	transcriptional-regulator	MAMTRAEINAKSDKKRSVRLQSYKLHEDIIKLLAELSEKTGKSKTAIVTEGILAMEKAYK*	phrogs_hmm	hypothetical_protein	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0034	shell	direct	high	182	0.995	GCA_005888175.1_01944
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	25487	25936	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	25488	25937	GCA_005888175_1_60_35	GCA_005888175_1_60_35	-	27390	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MIFTVGVETPENENQAYGMIVPALCQLDYGCFSGADDVDDLLPMVTEAITMMLEAMVEDGFDLTTLKDKGVTHYKADPEYAYFDTWLLVDVDISEYLGKKQRINVSLPEYLLTRIDRRVAAMGNYYKDRSHFLANAAHRELHAHSNKEM*	mmseqs_cdd	nonviral_gene	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0035	shell	direct	high	449	0.998	GCA_005888175.1_01945
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	25968	26150	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	25969	26151	GCA_005888175_1_60_36	GCA_005888175_1_60_36	-	27390	.	COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family [General function prediction only]. 	MHSGGLIKELKANGCYFVRHGKGDHQIWFSPKTGKRFPVPHPKQDLAIGTLKSIKKSAGL*	mmseqs_cdd	nonviral_gene	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0036	shell	direct	high	182	0.995	GCA_005888175.1_01946
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	26250	26621	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	26251	26622	GCA_005888175_1_60_37	GCA_005888175_1_60_37	-	27390	.	PFAM:PF06530.11	anti-termination-protein-Q-like	MNIDVISVEFGYWATPRYETEFPRVAAGFAEMKCDARYAEKYRMRPISDELGMEIDGYLGVIRKVTPELYDVFVLTYIKRWEKQEIWRYLHISRREYFNRLKTVKTSLLLLLSTEGKQCLFIA*	phrogs_hmm	hypothetical_protein	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0037	shell	direct	high	371	0.997	GCA_005888175.1_01947
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	26618	27160	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	26619	27161	GCA_005888175_1_60_38	GCA_005888175_1_60_38	-	27390	.	PFAM:PF05766.11	NinG-recombination-protein	MAKEYKCKVCAQPFVKTFSSTQKVCSPECAIKLARDNAQKAQERAEKKKQRERKDKLKSRSEWLKEAQSVFNKFIRLRDKDQPCISCGRYHQGKYDAGHYRSVGACPELRFCELNVHKQCAPCNDHKSGNIIEYRINLVNKIGADKVAWLERQDHEPKKYTIEDCKAMIKYYKAKIKELT*	common_virus_hmm	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0038	shell	direct	high	542	0.998	GCA_005888175.1_01948
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	CDS	27253	27387	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	27254	27388	GCA_005888175_1_60_39	GCA_005888175_1_60_39	-	27390	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	LEGEVINLRESTAQMSVKRLASLIEYITSWGVQNGVRFNDRWGL*	mmseqs_cdd	common_virus	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_CDS_0039	.	unmatched_CDS	none	0	0	.
GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote	cenote	tRNA	22801	22871	GCA_005888175.1	LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175.1_LNKQ01000062.1	GCA_005888175.1|LNKQ01000062.1	GCA_005888175_1_60	GCA_005888175_1_60@C0	22802	22872	tRNA-Trp	tRNA-Trp	-	27390	.	tRNAscan-SE score: 35.1	Trp	NA	tRNAscan-SE	.	C0	27391.0	0	27391	GCA_005888175.1|LNKQ01000062.1@region_1_27391@tool_cenote_tRNA_0001	.	.	.	.	.	.