core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	1	867	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	2	868	GCA_005888215_1_12_1	GCA_005888215_1_12_1	-	15125	.	PFAM:PF04233.13	minor-capsid-component	MPSAPKFAIGVEPKQAIEFLRQKKMLASKVLAKEMHDSALARATTIAHLTSLDMTKDIYQSLETAMREGKGFHVWKKELVSEFERKGWIFGKDPSIRGIDGHLLADPKTGEYFGTPRRLNTIYRVNMQSAYSAARYQRLRDNVDNRPYWQYSAVGDARTRPAHLALSGKVYRYDDPFWATFYPPNGFNCRCTVIALGERDLKRRGIDKPDDSSEFLVEVERPADKQGNREKTVGFKLPDGTIRVTDKGFDYNVGRLNYKPNLDLYPEKLAHAFAKVEMKGGEFKHDFEL	hallmark_hmm	common_virus	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0001	persistent	ambiguous	low	16	0.018	GCA_005888215.1_00155
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	851	1501	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	852	1502	GCA_005888215_1_12_2	GCA_005888215_1_12_2	-	15125	.	PDB:5NGD_B	Portal-Protein	MHNEVRRDLMISDAKQIAQTITQQIILPYLQINVDPNIAPHRIPYFEFDTKEYEDLSVFADAIPKLTGIGVQISESWVRDKLGIPEPQEGELILSTPQGEKTEEKTTALSAVLNHGKGCTCGCRAVALSAQNGKKDEQAELDGLIDDALANADFNQQLDPMMKQIVGVVMASESYDEAQEKLIALYPDLTSESHQAYLASAVFLADLLGAANAERT*	hallmark_hmm	common_virus	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0002	persistent	direct	high	650	0.998	GCA_005888215.1_00155
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	1507	2472	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	1508	2473	GCA_005888215_1_12_3	GCA_005888215_1_12_3	-	15125	.	PDB:5NGD_C	Portal-protein	MGFLDKVKGLLKGNETEPTQTDEAEVTATGRVLDDHPSAKITPSKLKQILEDAENGDIQAQHQLFMDIEEQDSSIAANMMTRKRSVLTLDWRIVEPRNATPAEEKLQAEIDELFYQYPNLEDLFMDLMDAVGHGFSALEIQWAQVDGKWVPKGFKPCPQSWFKLDKDDSLLLRTPANQMGEPLRPFGWVVHRHKSRSTQLARDGLYRTLAWLHMYKHYSVRDFAEFLELYGMPIRIGKYGAGATNAEKRTLLRALAEIGHNAAGIMPESMKIELHNVANAGAASGNNPFLQMVDWCEKSIARLILGQTLTSGRMVKAPLMR*	hallmark_hmm	common_virus	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0003	persistent	direct	high	965	0.999	GCA_005888215.1_00156
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	2552	4201	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	2553	4202	GCA_005888215_1_12_4	GCA_005888215_1_12_4	-	15125	.	PDB:4BIL_D	Large-Terminase	MKNKELLAELKAYSDSLRQKVEAKFEGWDDSLAAISERRKKVLDPVSGYDFFVSNYFPHYVRSRSRSQLHNYLFEQLPQVLQQPSSVHLAIAAPRGEAKSTLVSQLFTLYCLVTQKKRYALIVMDSIDQAYPMLEAIKVELEFNQRLRIDFPEMAGQGRVWQAATIITKANQKVQVAGSGKKLRGLRHGAYRPDLVVLDDIENDEQVRSPEQRDKLHDWLKKTVLPLGAAGDKLDVVYIGTILHYDSVLNRTLSSKAWKTAKFKALIRQPDDMSLWDKWEDFYLNEGEAVADAFYTQNQAAMDKGAVVSWAARPILTLMKIRARDGHATFDSEYQNDPLSSDDAMFANSLTYWTELPANLIYFGALDPSLGKAGASRDPSAILVGGYHRETGKLYVVEAQVKKRLPDLIIEDVIRMQKQYHCQRWFVETVQFQEFLKDELVKRSAQRGIPVPATATKPNTDKMLRIESLQPHTVNGLILLHSSQATLISQLRHFPKADHDDGPDALEMLWRNAVGSSAAIEWIGLDQLDTFDVEDEDDEDDDLYSFWRD*	hallmark_hmm	common_virus	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0004	persistent	direct	high	1649	0.999	GCA_005888215.1_00157
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	4351	4851	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	4352	4852	GCA_005888215_1_12_5	GCA_005888215_1_12_5	-	15125	.	pfam08822	Protein of unknown function (DUF1804). This family of bacterial protein is uncharacterized.	MAHDEKTKADVRRYYVFDCLTLELAAEKAGVSYNTARRWKREAEARGDNWDKVRDANTMASGKVEDVARGMLTAFVLYFENTMDEIKRTEALPVSEKAKLIQGLGDSYSKMVASSKRLLPEVSEMATAIKTITMFGDYIQANKPELINEFADLLEGFGKTLDKEFK*	mmseqs_cdd	nonviral_gene	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0005	persistent	direct	high	500	0.998	GCA_005888215.1_00159
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	4853	5119	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	4854	5120	GCA_005888215_1_12_6	GCA_005888215_1_12_6	-	15125	.	.	hypothetical protein	MSARERKRLAQLAEKQEINAKLDEILALSRQANHKIDRLDGRVDDIDTRLAKVEESLAKLGVRAAVIGGLSGLVVSVGFELIKAKFGG*	.	hypothetical_protein	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0006	persistent	direct	high	266	0.996	GCA_005888215.1_00160
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	5119	5376	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	5120	5377	GCA_005888215_1_12_7	GCA_005888215_1_12_7	-	15125	.	PFAM:PF07889.11	lipoprotein	MIDDKVFIGIGTTLIMTLVGWVWKSVNDKVAENEHGIKALEKQMQQDFQSKELAEVKDKHFESILKEVRDQLKEINQKLDKKVDK*	phrogs_hmm	hypothetical_protein	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0007	persistent	direct	high	257	0.996	GCA_005888215.1_00161
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	5500	5757	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	5501	5758	GCA_005888215_1_12_8	GCA_005888215_1_12_8	-	15125	.	PFAM:PF10883.7	Rz-like-spanin	MSMQIILAGLGIFALLGAYVMFKLKQARREIEQLLKTNEQLQMQKAVVETQVKHFEVRKKNEENTRHTSHNDVINRLQQSGDLRD*	phrogs_hmm	hypothetical_protein	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0008	persistent	direct	high	257	0.996	GCA_005888215.1_00162
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	5757	6047	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	5758	6048	GCA_005888215_1_12_9	GCA_005888215_1_12_9	-	15125	.	pfam10841	Protein of unknown function (DUF2644). This family of proteins with unknown function appear to be restricted to Pasteurellaceae.	MNKFFELFTNSDGRASTTGFIQFFGFLVMAGVLIYAVYLDRSTVTDLFFYFACFCGGSAATKGAVMAFQAKQTKLEEQITSETYVEPEQTDRPRGI*	mmseqs_cdd	nonviral_gene	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0009	persistent	direct	high	290	0.997	GCA_005888215.1_00163
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	6201	6704	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	6202	6705	GCA_005888215_1_12_10	GCA_005888215_1_12_10	-	15125	.	CDD:COG3926	Lysozyme	MSLTFTQIFNRLIGHEGGYVNDPRDPGGETHWGMTKRTALANGYQGNMRVMTRDQAFKIYYCAFWLRYQCDKMPEAVAYQFFDAAVNHGLGNASRMLQRAVNVADDGIIGNMTIAAIKQMAISDVIMRLNAERLEFYCKLGTFATFGKGWVRRVAGNLKYGAIDNEV*	common_virus_hmm	common_virus	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0010	shell	direct	high	503	0.998	GCA_005888215.1_00164
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	6785	7213	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	6786	7214	GCA_005888215_1_12_11	GCA_005888215_1_12_11	-	15125	.	PFAM:PF08765.10	late-transcriptional-activator	MVESLEDVAELLPETVQQMVDLVGFAAVEKIITNFGGATFRFTDGVHYFPKLKALIGLESAVKLREVFRGEWLYIPRCQTALRVLRNYRFKADYDYLTQHLNKSGRMAMLELCPKYQLSDRSGWEILAQVRHPEETHNLALF*	phrogs_hmm	hypothetical_protein	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0011	shell	direct	high	428	0.998	GCA_005888215.1_00165
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	7325	7741	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	7326	7742	GCA_005888215_1_12_12	GCA_005888215_1_12_12	-	15125	.	COG1598	Predicted nuclease of the RNAse H fold, HicB family [Defense mechanisms]. 	MFYPATFTPAEEGGYVVTFADLPEAITQGDTIEEAQEMAEDVLISCVEIYFDEERPFPLARACDSDETAVFMPDSVYAKVLLHNAMLAENVSKAQLARLTYIRPPEIQRILAPRHTTKIDTIAKALLGLGKQLQLSVV*	mmseqs_cdd	nonviral_gene	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0012	shell	direct	high	416	0.998	GCA_005888215.1_00166
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	7796	7972	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	7797	7973	GCA_005888215_1_12_13	GCA_005888215_1_12_13	-	15125	.	pfam07927	HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	MKQSEFLKWLKANGVEVENGSKHLKLYYQGKISHLPRHPAQELKKGLVEGIKKQLGLK*	mmseqs_cdd	nonviral_gene	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0013	shell	direct	high	176	0.994	GCA_005888215.1_00167
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	8098	8316	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	8099	8317	GCA_005888215_1_12_14	GCA_005888215_1_12_14	-	15125	.	.	hypothetical protein	MSIGYELEHQFDEIQSSLGGLHCLRQFLEITDNTADTLSYSQLAGMIAVFTAALDCQVSTVRQLVKELPIKA*	.	hypothetical_protein	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0014	shell	direct	high	218	0.995	GCA_005888215.1_00168
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	8327	8968	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	8328	8969	GCA_005888215_1_12_15	GCA_005888215_1_12_15	-	15125	.	COG3561	Phage anti-repressor protein  [Mobilome: prophages, transposons]. 	MTHFNITTFNGSIQNQSVQLINARELHEALKVSTRFQDWIKRRIADYGFTENEDYTCFSNLRSTENTGLNRFWGGQNKIEYHITLDMAKELCMLERSEIGRQARRHFIKMEQHAIALATEMQAQMLAIPTFLRNNPDELARLITTAQTAFLTANPQAKDFLRYREMGLSYREIGTLLGKTKDSVKWMAFKMRNLGFFSSTLPKTTAVQLDLLA*	mmseqs_cdd	common_virus	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0015	shell	direct	high	641	0.998	GCA_005888215.1_00169
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	9505	9708	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	9506	9709	GCA_005888215_1_12_16	GCA_005888215_1_12_16	-	15125	.	pfam04383	KilA-N domain. The amino-terminal module of the D6R/N1R proteins defines a novel, conserved DNA-binding domain (the KilA-N domain) that is found in a wide range of proteins of large bacterial and eukaryotic DNA viruses. The KilA-N domain family also includes the previously defined APSES domain. The KilA-N and APSES domains may also share a common fold with the nucleic acid-binding modules of the LAGLIDADG nucleases and the amino-terminal domains of the tRNA endonuclease.	MKNQIILANEVIALDEHGRISLNTLHKLSGTGKEKQPALWLRLHGTQELIAELDRSTDLKIAYTAKA*	mmseqs_cdd	common_virus	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0016	shell	direct	high	203	0.995	GCA_005888215.1_00171
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	9735	10133	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	9736	10134	GCA_005888215_1_12_17	GCA_005888215_1_12_17	-	15125	.	COG4382	Mu-like prophage protein gp16  [Mobilome: prophages, transposons]. 	MLRKNLIAKIHIGKSQLGLDDETYRQLLVSTTGKTSCTEMTESELQQVLNVMVQKGFKSSSHFWGNRAAPREDKKIYLAKITALLAKHGLPKEYADGIAKRSFKVDFVHWLQPWQLKKVVQMLAVYDRNRQH*	mmseqs_cdd	nonviral_gene	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0017	shell	direct	high	398	0.997	GCA_005888215.1_00172
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	10374	10622	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	10375	10623	GCA_005888215_1_12_18	GCA_005888215_1_12_18	-	15125	.	.	hypothetical protein	MTDQIYEFKQVTDILVLDDKQFERFLADFKEWFHFQKQARAEAEKLKELGLNITLADVIRWKDDDLIGVGSITIDVQKTRDY*	.	hypothetical_protein	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0018	shell	direct	high	248	0.996	GCA_005888215.1_00173
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	10627	10800	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	10628	10801	GCA_005888215_1_12_19	GCA_005888215_1_12_19	-	15125	.	.	hypothetical protein	MSEKKAQVTEQLAQIMEQIEAAKEQWLVDDSKGALLLLQAASREMESVAWRMAPVLG*	.	hypothetical_protein	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0019	shell	direct	high	173	0.994	GCA_005888215.1_00174
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	10797	10961	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	10798	10962	GCA_005888215_1_12_20	GCA_005888215_1_12_20	-	15125	.	.	hypothetical protein	MAKYVARFYCLVEAVVEAENNEQVLELCDLNVCDVNKLPHTITEIDDVVEVEEV*	.	hypothetical_protein	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0020	shell	direct	high	164	0.994	GCA_005888215.1_00175
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	10972	11169	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	10973	11170	GCA_005888215_1_12_21	GCA_005888215_1_12_21	-	15125	.	NF033650	ANR family transcriptional regulator. ANR family transcriptional regulators include the AggR-activated regulator Aar. The name ANR (AraC Negative Regulators) refers to an effect on, rather than homology to, certain AraC family transcriptional regulators.	MNKNIHKFDRFKYYSEQAANSERRGELQDAKAQWAIAELNAPNARNQEWCKHRAAFCDRVLRKPF*	mmseqs_cdd	nonviral_gene	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0021	shell	direct	high	197	0.995	GCA_005888215.1_00176
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	11356	11973	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	11357	11974	GCA_005888215_1_12_22	GCA_005888215_1_12_22	-	15125	.	pfam11363	Protein of unknown function (DUF3164). This family of proteins has no known function.	MKQMIEGKEYWRDARGNLTPAELVKDIDKARDVLVREWVEKGVSLNKEMRNFKDGIFGDIQAFIELSAEKYNAKMGGSKGNITLYSYDGKYKIQRAINDHLQFDERIQAAKVLIDACLNEWSEGSRPELKALIERAFNVDKEGNLNTSRILGLRRVDIQDERWQNAMQAISESVQVVSSKAYVRLYERVGESDQYVPIALDVAGV*	mmseqs_cdd	nonviral_gene	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0022	shell	direct	high	617	0.998	GCA_005888215.1_00177
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	11974	12165	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	11975	12166	GCA_005888215_1_12_23	GCA_005888215_1_12_23	-	15125	.	PFAM:PF04936.11	host-nuclease-inhibitor	MATRRQIYAVYRGEENLGDGTAEELAKKLNVSEKTIYSSATVARCKRDKGKRLVVIKLDKEEL*	phrogs_hmm	hypothetical_protein	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0023	shell	direct	high	191	0.995	GCA_005888215.1_00178
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	12174	12470	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	12175	12471	GCA_005888215_1_12_24	GCA_005888215_1_12_24	-	15125	.	.	hypothetical protein	MLQPNTTKQLNKNNAVMLAYLEQVEKAVRRLNEMGLTVINVHFEKIRPTVRVMNNAVTEKLEKDQQAYVYHVGRDVGRYQEAQFTVEGIRVVWRKYLN*	.	hypothetical_protein	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0024	shell	direct	high	296	0.997	GCA_005888215.1_00179
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	12482	13231	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	12483	13232	GCA_005888215_1_12_25	GCA_005888215_1_12_25	-	15125	.	COG2842	Bacteriophage DNA transposition protein, AAA+ family ATPase  [Mobilome: prophages, transposons]. 	MLDDKVAEYLARQDQKILKAHYNSQFVSTLAARKTMDVMQYAHTEGKIVVVYGAAGLGKTATLKEYAARYPSSMLIETDPGYNPRVLLHKIAETCGVVAQGGNHDVFKKIVEKLDGSERLLIIDEAELLSTRSLEFVRRLHDKTQIGVVLAGMPRLLVNLRGKSGEFAQLYSRVNNTHNFGNALPDKDLAMLIESALGTGEFNDAFIKFSKGNARRLSNLMSGVVRLSKLNECDITYEMIEEYNKMLIS*	mmseqs_cdd	nonviral_gene	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0025	shell	direct	high	749	0.999	GCA_005888215.1_00180
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	13177	13362	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	13178	13363	GCA_005888215_1_12_26	GCA_005888215_1_12_26	-	15125	.	PFAM:PF10078.8	transcriptional-regulator	MKNKELQRFMTNSGMTQKQIAQALSVSVGTISLYLKDQYAGDVQCLMTRWRSIWLAKIRRF*	phrogs_hmm	hypothetical_protein	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0026	shell	direct	high	185	0.995	GCA_005888215.1_00181
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	13414	13812	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	13415	13813	GCA_005888215_1_12_27	GCA_005888215_1_12_27	-	15125	.	.	hypothetical protein	MKNFIEKERKARAKRRFERAQTLIKRDWSKINDFPVWILTPSGVAPNLASQSMALDMNQGTPSYPSLQNQAHQCFVTKDEADRANRPEIEAAQVDPAQQVEQLASELKSVVQQADRLGQKVVAVSLRVEFAA*	.	hypothetical_protein	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0027	shell	direct	high	398	0.997	GCA_005888215.1_00182
GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote	cenote	CDS	13823	15124	GCA_005888215.1	LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215.1_LNKO01000012.1	GCA_005888215.1|LNKO01000012.1	GCA_005888215_1_12	GCA_005888215_1_12@C0	13824	15125	GCA_005888215_1_12_28	GCA_005888215_1_12_28	-	15125	.	PDB:1BCO_A	Mu-Transposase	LAGEPLRLEMKPSIDQVRAALAKLPKHIKEIGRKTGSELRALNTYVKRDWSVLQVNDVWVGDGHAMKLKVAHPEHGRPFIPEVTLIMDTSCRFIVGWSASLAENVLAVADALRYGVERYGIPAIYYSDNGGGEKNWMLDGDITGMLPRLGIKHQTGIPGNPQGRGIIERVHQTILYKIARQFETYHGTGADKDTVRQVSTAVISLDKAKRKGATQLTPKQQWAVGKLPSWNQFLQACQEGIDEYNNKHEHRELGGMTPAQKRRQLMEKMNPDDLVFVTPVEARDLFRPSTLRVAQRGWLQLFNNYYFSAKLLDVDGQKVQVMFDIHDPSQVIVRKQDGTFVCYAELDGNKRDAFPMPFVEKTRQERYARRAKLKQEQLDEINAELNPIITIEHQPDFAVLVPKVKQKIPAKPIFHNLTEKEEWEAEQAKLVNE*	common_virus_hmm	common_virus	C0	15126.0	0	15126	GCA_005888215.1|LNKO01000012.1@region_1_15126@tool_cenote_CDS_0028	shell	direct	high	1301	0.999	GCA_005888215.1_00183
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	2	145	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	3	146	GCA_005888215_1_27_1	GCA_005888215_1_27_1	+	12003	.	pfam08765	Mor transcription activator family. Mor (Middle operon regulator) is a sequence specific DNA binding protein. It mediates transcription activation through its interactions with the C-terminal domains of the alpha and sigma subunits of bacterial RNA polymerase. The N terminal region of Mor is the dimerization region, and the C terminal contains a helix-turn-helix motif which binds DNA.	IFNEFNGSNHRELARKYNVSMQWIYQIVKKVTKEEIARRQFDMFSEK*	mmseqs_cdd	nonviral_gene	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	219	638	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	220	639	GCA_005888215_1_27_2	GCA_005888215_1_27_2	+	12003	.	.	hypothetical protein	MKKWLVITLMMLGITACGEPEDPNAPTQAEKDTLTLAFINKIKKDSSGAVECKTKQVNNRYYVGCALISLDGRGNTYIFLYNKDKDPVKRFYALNGTAMTIYDNYFKNESLLGSYKDTFGLPMEKDIDLSLIQKSFEEK*	.	hypothetical_protein	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0002	shell	direct	high	419	0.998	GCA_005888215.1_00446
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	725	1261	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	726	1262	GCA_005888215_1_27_3	GCA_005888215_1_27_3	+	12003	.	PDB:1M0D_D	endodeoxyribonuclease-I	MAIHHIVIHCSATTNGKPLRTSSQSAAERIDEWHQKRGFKRNPTYIKRFNPHLKHVGYHFIIDTNGTVETGREVGETGAHVKGHNQNSIGICLVGGITGMGKNHGEYTRKQWQALHKLLRKLESRFPSSRICGHRDLSPDLNGDGTITPNEWLKDCPCFDVWEWLDSEQVINDEHLFE*	common_virus_hmm	common_virus	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0003	shell	direct	high	536	0.998	GCA_005888215.1_00447
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	1270	1413	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	1271	1414	GCA_005888215_1_27_4	GCA_005888215_1_27_4	+	12003	.	.	hypothetical protein	MSASIKVKVSRSLKGKSFQKLSNNAKQNQRLNSGVTAANAFYLLWGY*	.	hypothetical_protein	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0004	shell	direct	high	143	0.993	GCA_005888215.1_00448
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	1416	1517	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	1417	1518	GCA_005888215_1_27_5	GCA_005888215_1_27_5	+	12003	.	.	hypothetical protein	MKREIRGITFFSLVWEVMIFGGFIKEPKNEKAE*	.	hypothetical_protein	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0005	shell	direct	high	101	0.99	GCA_005888215.1_00449
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	1501	1731	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	1502	1732	GCA_005888215_1_27_6	GCA_005888215_1_27_6	+	12003	.	pfam10841	Protein of unknown function (DUF2644). This family of proteins with unknown function appear to be restricted to Pasteurellaceae.	MKKLNELITNTDGRLSTTGTIQFGGALLMAIILAICVYLDRSYVPELFMTFAIFCGGGIATKGFANAMERRQGGRE*	mmseqs_cdd	nonviral_gene	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0006	shell	direct	high	230	0.996	GCA_005888215.1_00450
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	1728	2111	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	1729	2112	GCA_005888215_1_27_7	GCA_005888215_1_27_7	+	12003	.	.	hypothetical protein	MNLQVIVVCTTFFILLCGYVFFRLKQAQRRVEKLIEENAQLQTEKAVAQTQVKHHQVRQKNEENIVSSSRERIIDSLHNKTISVINPSCSGFRLIKASRQDSTETLRQILVHNQTYREICPIQGEKK*	.	hypothetical_protein	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0007	shell	direct	high	383	0.997	GCA_005888215.1_00451
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	2108	2416	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	2109	2417	GCA_005888215_1_27_8	GCA_005888215_1_27_8	+	12003	.	PFAM:PF07889.11	lipoprotein	MTINVEFWHLVGLLISFLGCCFGFAKMLVAQFQNSLSERHHNQMKVNDKVEDIEKQLNQMQSALPLNYVLRDDYIRGQAILEAKMDALHKTLSDLYKMESTR*	phrogs_hmm	hypothetical_protein	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0008	shell	direct	high	308	0.997	GCA_005888215.1_00452
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	2413	2715	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	2414	2716	GCA_005888215_1_27_9	GCA_005888215_1_27_9	+	12003	.	.	hypothetical protein	MMEKARREGMRWQLLNVLHKAMPYTTSEQFLLDVIRGIYPNVTALEIRQQLEYLQDRKLISIDKQPHGVWFADIHRLGVDIVEYTIDCQAGIARPEKYWA*	.	hypothetical_protein	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0009	shell	direct	high	302	0.997	GCA_005888215.1_00453
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	2725	3273	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	2726	3274	GCA_005888215_1_27_10	GCA_005888215_1_27_10	+	12003	.	pfam11985	Protein of unknown function (DUF3486). This family of proteins is functionally uncharacterized. This protein is found in bacteria and viruses. Proteins in this family are about 190 amino acids in length.	MAPRSSIEQLPEDVRRWLERALTENGFAGYVELEKLLKDKGYSISKSAIHRYGQKIEGRLKAIKESAEIAKLITESVDDDGDSQSDALMRLVQTDLMNILIESRNTEELSVKDKIKLFGNIGKNIAAMTSASVKLKQYQAEHKAKLLAKLDEMAKNAEQEGNDMPTLERVRKGLLETYGLNN*	mmseqs_cdd	common_virus	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0010	shell	direct	high	548	0.998	GCA_005888215.1_00454
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	3257	4579	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	3258	4580	GCA_005888215_1_27_11	GCA_005888215_1_27_11	+	12003	.	PFAM:PF03354.15	Large-Terminase	MGLTTNTTPRTVLYNYQKRWLQDNSRFKVAMFSRQSGKTFTTTLEIVLDCMACEARGEKTRWVILSRGERQAKEAINEGVKRHLEAVGIACQIMEVPFSPTINALEVIFPNGSKITALPANPDTARGFSANVFLDEFAFHQDSREIWKALFPVISADWKLRVVSTPNGKGNKFYELMTDLNNTEWSRHTVDIYQAVADGLPRNIEQLRKGLNDEDAWAQEFELKWLDEASSWLSYDLIDAVEHHQAGIPELYTGNPCFVGMDIAVRGDLTVIWVIELVGDVYWTREVITLKRVALREQLAELDRVFNQYHVITCYLDQTGMGEKMVEDAQYSHGKRRVQGVLFNVATKLNMATIGKNAFEDRQIRIPQGDTDLREDLHKLKKVTGSNGVPRFIAESDSKGHADRTWACFLALTAAKEGVIMPIKAQSRKPRTSRKMTQGY*	hallmark_hmm	common_virus	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0011	shell	direct	high	1322	0.999	GCA_005888215.1_00455
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	4581	5996	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	4582	5997	GCA_005888215_1_27_12	GCA_005888215_1_27_12	+	12003	.	PDB:5NGD_C	Portal-protein	MAKKFDLVKEIAVRSHAIDYFSMGQYLPNPDPVLKKMGRDISAYREVLSDSHVAGCVRRRKAAIKGLEWRITPTGNEKTDEILTALFERLPLPQIITEMLDAALFGYQVLEVMWENQNGLWLPAELIGKPQEWFVFDEQNQLMLRDKENRNGKLVPEKKFLLTTQEANYTNPYGKPDLALCFWAATFKRGGFKFWLEFTEKYGSPWLVGKHPRQAQTHEIEDLLDSLEQMIGTAVAAIPDDSAISMLESASKGGSSQVFDEFLKYCKSEIAIALLGQNQTTEQESNRASATAGLELTKEIRNEDITLVESGFNQLLNWICELNFNVETLPKFELYEQESIDKVQVERDQILSQMGVKFTAQYLHRTYGFEEGDIELTVNNTPKTAEFNEPTLPSNIADGVVEQLEMEGEPYVEDWMQTIKDRLSQAESLEDFRNQLDSLIPELNFAEYGELMAWASTTAFLAGRQSVVEEK*	hallmark_hmm	common_virus	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0012	shell	direct	high	1415	0.999	GCA_005888215.1_00456
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	5997	7274	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	5998	7275	GCA_005888215_1_27_13	GCA_005888215_1_27_13	+	12003	.	PFAM:PF04233.13	minor-capsid-component	MSKFTFQEQSRYFEKKLNLKTNSYLDVLGEEHDYFFVVAGANRNEVINAFREAVDQAIHHGETLESFRQRFDEIVEKTGWDYNGGRNWRTRIIYDTNVYGAYNRGRLQQHLDLADVMPYWEYQHNDNSHPRPEHVALDGTIRPATDQFWKYYYPIKAYGCHCTVIAHDEHDLKAMGKQVSPPVEIEYEDKLVGVRSGSPRLVTLPKGYDVGFAPYNFDDLSSSRNVEIDSILFQKLTTAEPRFASLLIQDVMKNTATVALLNHSMKEMVETVSNEKIARGKMKYVGVIHDEVIDKLTAMDKAPQTAVIAVRDEDVLHALRDTKQAKGINLPIEFWEQLPEKLRNPKAILFQPKESFNDKNAKDTLLFIYDTDHGKVAVKMDYEVKLRDQLTSKKFKANLNVVKTASVIDEDLKKLQQFEVLWGEL*	hallmark_hmm	common_virus	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0013	shell	direct	high	1277	0.999	GCA_005888215.1_00457
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	7461	7649	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	7462	7650	GCA_005888215_1_27_14	GCA_005888215_1_27_14	+	12003	.	.	hypothetical protein	MTELEERKKALELLPQFQGLTINEIISVLHWLQAYVQDYQRFEISNELVSHQEEIESSHDSV*	.	hypothetical_protein	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0014	shell	direct	high	188	0.995	GCA_005888215.1_00458
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	7591	7788	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	7592	7789	GCA_005888215_1_27_15	GCA_005888215_1_27_15	-	12003	.	.	hypothetical protein	MSNYEDNLLRNIFVAQVATLAKAIKAEKLAQGTRTTSDCYREAIIEIKRNREKILSLLDEIQAHY*	.	hypothetical_protein	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0015	shell	direct	high	197	0.995	GCA_005888215.1_00459
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	7852	8352	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	7853	8353	GCA_005888215_1_27_16	GCA_005888215_1_27_16	+	12003	.	PFAM:PF05069.12	virion-morphogenesis-protein	MIKITLNDTQALAKLHSIAQQLQHPRKLYGLLGETLKKIHADRFKAEVAPDGKKWQPLSSITRKIKGNDQILKQGGYLSQKTAYNYDDNRLEFGSDAKYARLHQFGGVIRPKKGKRLKFGKGSNTVYAKQSKIPARPWLGVNAQDEQKLLKKATALLQRQINQNLK*	hallmark_hmm	common_virus	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0016	shell	direct	high	500	0.998	GCA_005888215.1_00460
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	8595	9698	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	8596	9699	GCA_005888215_1_27_17	GCA_005888215_1_27_17	+	12003	.	PFAM:PF10123.8	head-maturation-protease	MNLIEIFKAGTRKDANGKEVTLTIEDLQQAVQSYNVEFHEAPAVIGHPQHNHPAYAWVKRLELDGDILKAEFDQIDPEFAEMVDKGRFKKVSASFYLANSQANPKQGSLYLRHVGFLGAMPPAVKGLRNPEFAEDEEGVVDFSDWTEATLWRRLRDWFIGKHGQEEADKVLPDYLVGSVQEEAVRNSLQPQKAESPIFNEPTQQQGEPEMSAEEKAELERLKAENQQLKDEKAQAEAQKAEAQLNQTKAENADFAESLVSVGKLAPVSKEKAIELLNCAAVQSAGGVVEFGEGENILTAIKAFLEAQPQIIQFGEVATKDNATTTEDNTVEYAEGTSAEAIDMDKRVRAYMKEHNVSYVTAFNAIHS*	phrogs_hmm	hypothetical_protein	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0017	shell	direct	high	1103	0.999	GCA_005888215.1_00461
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	9717	10643	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	9718	10644	GCA_005888215_1_27_18	GCA_005888215_1_27_18	+	12003	.	PFAM:PF03864.14	Major-Capsid-protein	MSDLSKHRVVDPVLTELAQGYYNGNMISEVLFPIAETQKEGGKIPTFGRLAFRLQTTKRELRAASNRLTPEDIGSLTVVLEENDIEYPIDIREVNEGEGVYPLRQYATGVTQDVIVLNREKACADLALNEDNYDASNKITLSGTSQFTDKNSDPISVIKAGIRAIKRATGRKPNVCAISGDVWEVLSEHPKVLEKIKYVATAVLTPEDFAKLVKIDKVIIGEAVYEQSSELKDIWSKAIVLAYVAAASKEKKQNIYEPSYGYTVRRKNGLYVDTYTEVGGKVEIVRTTDINKPYIVGKAAGYLIKGCI*	hallmark_hmm	common_virus	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0018	shell	direct	high	926	0.999	GCA_005888215.1_00462
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	10709	11026	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	10710	11027	GCA_005888215_1_27_19	GCA_005888215_1_27_19	+	12003	.	.	hypothetical protein	MNKKMLYAVVGTMAILHNGKRYEKGDKIELTAEEAENLSLYIQLDQSELEKQKEERRLAEEKAEQERLAAEKAQKEAEEKAEKERLVAEKAQKKTEEKTKGKADK*	.	hypothetical_protein	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0019	shell	direct	high	317	0.997	GCA_005888215.1_00463
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	11026	11460	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	11027	11461	GCA_005888215_1_27_20	GCA_005888215_1_27_20	+	12003	.	CDD:cd08053	head-to-tail-adaptor	MYISAQDLTEVLSERSLIELSNDHSRATEYNPLVLDKACQYATETVDGYLRSRYLLPLKSVPTIVRNICLQLARFWLYSRRPEGTGFPENVKDTYAQALKDLERIQSGKLHLGLEELNENGTNALDDVAKFKTRANKKIDLTGY*	hallmark_hmm	common_virus	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0020	shell	direct	high	434	0.998	GCA_005888215.1_00464
GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote	cenote	CDS	11472	11969	GCA_005888215.1	LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215.1_LNKO01000028.1	GCA_005888215.1|LNKO01000028.1	GCA_005888215_1_27	GCA_005888215_1_27@C0	11473	11970	GCA_005888215_1_27_21	GCA_005888215_1_27_21	+	12003	.	PDB:2GJV_C	tail-completion-protein	MSATQTILNSIQTHLLSQIDRFAIELFPDNPSEYFLRDESGAILIQYAGSKFERINSTDIIQQRRTVTIALTVIARSQHNDDGALAILDQVRLAIVGFRPENCLACALINEEFAGEADGLWQYQLLVQTETWQVEQTKAVDLPKLANVYSRKPTDPLNPILQPKS*	hallmark_hmm	common_virus	C0	12004.0	0	12004	GCA_005888215.1|LNKO01000028.1@region_1_12004@tool_cenote_CDS_0021	shell	direct	high	497	0.998	GCA_005888215.1_00465
GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote	cenote	CDS	2	1360	GCA_005888215.1	LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215.1_LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215_1_28	GCA_005888215_1_28	3	1361	GCA_005888215_1_28_1	GCA_005888215_1_28_1	+	8990	.	PDB:3J9Q_Q	tail-sheath-tube	KRVTGGSVAVETVDGAIIGIVGTAPIGPLNELTLCQTKKDFAKFGTILNQGFTLPDAFDVIARYAAGQVYVVNVLDVSKHKSEIQDESITLDETTLLANTQKKGLLSLTLKSNSTPLTLNEDYWVDMQTGEIRLKVSKTSLTATYTYADPSKVTEEDIKGGIESSTGKRKGFELLRDGFNLYGADAKILICPEFDKTASCASALGTLAEQLKAVAYVQLPKGTSLSKAIQGRGPQGTINAKDSTERVRHFFPYALGSSNQLESLAVHAAGLRMKVDVEKGYWHSTSNHQLLGVIGMELPLTARIDDIQSETNRLNAVGITTIFNSFGTGFRLWGNRSSNYPTVTHIINFETALRTGDLIDESIRMVELQYIDRPIDDALIDSLTETVDTYLRALPSIVGYSLGLDYDYDLVDAFSKGQVPIKYDYTPKLPAERITNTSVMTRKYLVNLVSQK*	common_virus_hmm	common_virus	NaN	.	0	8990	GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote_CDS_0001	shell	direct	moderate	1181	0.869	GCA_005888215.1_00466
GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote	cenote	CDS	1371	1889	GCA_005888215.1	LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215.1_LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215_1_28	GCA_005888215_1_28	1372	1890	GCA_005888215_1_28_2	GCA_005888215_1_28_2	+	8990	.	PDB:5W5E_O	major-tail-protein	MSVAINQIINANVYMDGNSLLGKAKEFKLPDIEFEQIEHKGLGLVGTIKLPSGIAALEGEVTWDSFYPEVRAKAYNPMKNVQLMARSNLQVFDARGLVAEEPMVTIMNVSFSKITGGSLKNKEATEHADTFQVHSIKQTVGGKEIFFYDAFANILRVNGQDVLQKYRTNIGQ*	hallmark_hmm	common_virus	NaN	.	0	8990	GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote_CDS_0002	shell	direct	high	518	0.998	GCA_005888215.1_00467
GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote	cenote	CDS	1983	2267	GCA_005888215.1	LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215.1_LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215_1_28	GCA_005888215_1_28	1984	2268	GCA_005888215_1_28_3	GCA_005888215_1_28_3	+	8990	.	PFAM:PF10109.8	tail-protein	MSQKVDAVRTTIKLSSPVQLPDGTTLEELKVREPLVKDFRTASQQGKTNEDREIIVAALCCGLVLEDMDLIKWKDYVQVQRFLFGSDDTDGDVK*	phrogs_hmm	hypothetical_protein	NaN	.	0	8990	GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote_CDS_0003	shell	direct	high	284	0.996	GCA_005888215.1_00468
GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote	cenote	CDS	2209	2397	GCA_005888215.1	LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215.1_LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215_1_28	GCA_005888215_1_28	2210	2398	GCA_005888215_1_28_4	GCA_005888215_1_28_4	+	8990	.	PF06528.12	Phage P2 GpE	MFRYNDFCLVQMIPMETLNNAIADVVWWFGFSAEEINNWTLKELDDWLAQANRQVKAGYVRA*	hhsuite_tools	hypothetical_protein	NaN	.	0	8990	GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote_CDS_0004	shell	direct	high	188	0.995	GCA_005888215.1_00469
GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote	cenote	CDS	2382	2696	GCA_005888215.1	LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215.1_LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215_1_28	GCA_005888215_1_28	2383	2697	GCA_005888215_1_28_5	GCA_005888215_1_28_5	-	8990	.	.	hypothetical protein	MFDLFKEIIEDWKDYDMVEKAYWSAIGLLFSIGFLAFSWWYWVGMFNATDNFFIAFGVGFILYLVLGAIIALVTAPLMTLLSLSAATITGAIIGLVKFYRQART*	.	hypothetical_protein	NaN	.	0	8990	GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote_CDS_0005	shell	direct	high	314	0.997	GCA_005888215.1_00470
GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote	cenote	CDS	2742	5333	GCA_005888215.1	LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215.1_LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215_1_28	GCA_005888215_1_28	2743	5334	GCA_005888215_1_28_6	GCA_005888215_1_28_6	+	8990	.	PFAM:PF10145.8	minor-tail-protein	MANNLVLGLVIGASLKGSFSAAFGKANKTIENLSNNLGKATQQNEKLGAKMAKWQERQAALHQKMQLAYLSGDQNIGKLTRRYERMQAVIARTAEKQQHFTRAIQSSEKAQRSLSSTLEKQQARKQNRDELKGKLAKSTAITASVALPTWNAVKTYMQQEEAANNLKISMMKADGTFGKFKEIGKIADQLGTDLPGTREDFYKLAKAMKMQGVSDDTLINSGLKTSAKLNVLLEMDQEQGGEFFAKMMESHGLSEAELGASADDLQRAMFAAGMKKDDMYGAMTYYASNVRSMKLTGRENSQKIYAIEGLAAQQGLEGTSFGTNFSTMLDRMSKGPQMIAEAKKGMKAEARDILEKSGVKFNFWDKKGNFKGIDGMVKELEKLQKIRAKFGDQAAQDVADAMFGTEGKRVALLLGEKGTTGLQDFLQKMKDQASIEERVAQKTKTLGSALESLGGAWESAVGNIGSVFADDIKSGAKALQGFVEDTLTPFVSEHKTAIKWIATTVGGFSLLSTGVLATKFAFSGIASIFSAAFMPFKVFKAIKAAKELETLTGTVTKTGRVMKWLGSAFGVVKKAFIGLGKALLTNPIGLTITAIAVAAYLIYDNWEPISAWFANLWTNVTTYFQSFCTWVQGIWNSATEWVSSAWSGVSDYFGQLWNNITTFFNSGIGNITATILNWSPLGLFQQVFSTVLSWFGIDVPAKFTDFGKNMIDGLVNGIRNAWEGAKQIVSDLGDGIKGWFAEKLGIHSPSRVFMGFGENTVQGLAIGINKSLGLAEKASDEMSNAVGIFPHSDYQSLQTTFAQQQSEQAQHGGMTIHFNPTINVNGSSNNQVLNDVKEGLNISLREFETMLARVLDQQKRRAY*	hallmark_hmm	common_virus	NaN	.	0	8990	GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote_CDS_0006	shell	direct	high	2591	1.0	GCA_005888215.1_00471
GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote	cenote	CDS	5333	6265	GCA_005888215.1	LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215.1_LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215_1_28	GCA_005888215_1_28	5334	6266	GCA_005888215_1_28_7	GCA_005888215_1_28_7	+	8990	.	PFAM:PF06995.10	tail-protein	MYLMLGTIALEPIDITDFSEIQAARFAEHQVLKGKPRLQAMGESLAELNLSVRLHHKIGGVERRYQALLAAKAKQDALALIWGRGKFKGNFVITDIHSTTLFTDKYGNVLCRELTINLKEYVGELKNNLLGAALNIGKGSLLGSILPPEFFAGMNAAKEALTKGIDLYNQGKRIVDEVQNTIAIMKQFSQDPATALAYLPSVLGNLDGALGSFSELTGMRELFNGVRSVLPVVSEFSQEVAEIQSGLMAIQSDFQQGSSGSDWSEWFPSANRTMSEVAESFDFLAPRVAEMTAWIVLRNDDEVNNDTDRA*	phrogs_hmm	hypothetical_protein	NaN	.	0	8990	GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote_CDS_0007	shell	direct	high	932	0.999	GCA_005888215.1_00472
GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote	cenote	CDS	6246	6476	GCA_005888215.1	LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215.1_LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215_1_28	GCA_005888215_1_28	6247	6477	GCA_005888215_1_28_8	GCA_005888215_1_28_8	+	8990	.	COG5004	P2-like prophage tail protein X  [Mobilome: prophages, transposons]. 	MTQTVLKHIVKQGERWDNLAYHYYGDALEYSRIIDANPHLSFYEVLPTGATVFIPVLQVKPTNNEDMPPWLRGDNE*	mmseqs_cdd	nonviral_gene	NaN	.	0	8990	GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote_CDS_0008	shell	direct	high	230	0.996	GCA_005888215.1_00473
GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote	cenote	CDS	6469	7533	GCA_005888215.1	LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215.1_LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215_1_28	GCA_005888215_1_28	6470	7534	GCA_005888215_1_28_9	GCA_005888215_1_28_9	+	8990	.	PDB:3CDD_F	tail-protein	MSNIAQPDFSLFYEKTNITADIEPHLIELSYTDYLEGQSDELVVQFEDISGKWIRAWFPTQGDKLKGAIGYKGEQLVDIGAFEIDEVEYQYRPSNITLRALSAGVSKNQRTLKPKAYEHTTLAQVIAVVAKRLKLKVVGEIKHIPIARITQYQERDLEFLARLGREYHHSFKVVNDQLVFTAKEKLGESESVLTIEEQDTISISLRDRISSTAKEVNISGYDANGKKVIKKSKKAKAKREDVSQAAKSSEDSLQIVTRGESQEQIDARGEAALAEQNDDQQSGTIKLWGNPKLVAGNTILLRNLGVFSGKYLIKSSRHTIYRNQGYTTTIDVRLLEFIADDLVTQSMEKHNANP*	common_virus_hmm	common_virus	NaN	.	0	8990	GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote_CDS_0009	shell	direct	high	1064	0.999	GCA_005888215.1_00474
GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote	cenote	CDS	7520	8128	GCA_005888215.1	LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215.1_LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215_1_28	GCA_005888215_1_28	7521	8129	GCA_005888215_1_28_10	GCA_005888215_1_28_10	+	8990	.	CDD:COG4540	baseplate-assembly-protein	MQTHNFTATYQEGIVSAVDSTKHKVRCKIPALDDLETAWLSYLTPNAGGNQFYCLPDVGELVAIILDARGEGGCVLGAIFNAQDPTPTGDSNIWMKKFSNGTIIKHDRNSGNVEVSAVGEVLIKSPSKVTIDCPATETTGDLMVKGALTYMKGMTGYGGGGATAMINGSLETKGGDIKADNISLKTHKHTEQGDGKDTSIAK*	common_virus_hmm	common_virus	NaN	.	0	8990	GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote_CDS_0010	shell	direct	high	608	0.998	GCA_005888215.1_00475
GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote	cenote	CDS	8183	8548	GCA_005888215.1	LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215.1_LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215_1_28	GCA_005888215_1_28	8184	8549	GCA_005888215_1_28_11	GCA_005888215_1_28_11	+	8990	.	CDD:COG3628	baseplate-assembly-protein	MNTHTHLTTHWQLAPNDEVQSVIQGIDDIHLCIANILNTIKGTDILRPEFGSDHFRYIDQPEDLAVPNFVREITFALQRFEKRIEVDEVKVSGNAPHFTFTIFWSLKEDVYREIYSTEVKG*	common_virus_hmm	common_virus	NaN	.	0	8990	GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote_CDS_0011	shell	direct	high	365	0.997	GCA_005888215.1_00476
GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote	cenote	CDS	8548	8988	GCA_005888215.1	LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215.1_LNKO01000029.1	GCA_005888215.1|LNKO01000029.1	GCA_005888215_1_28	GCA_005888215_1_28	8549	8989	GCA_005888215_1_28_12	GCA_005888215_1_28_12	+	8990	.	PFAM:PF04865.13	Baseplate-J-like-protein	MKADDVKIVSEDVKQILADTIADYEKRTGKTLQPAHIERSIIQSYAYRELLVRKGINEAFLNTFPQFAKGLALDLCGEPMGCYRLQDKPARCVLRFSIEATHPLVLIPKGTRVAVDEKLEFITLNDDVITPLITYVEIEAQANIKGP	common_virus_hmm	common_virus	NaN	.	0	8990	GCA_005888215.1|LNKO01000029.1@region_1_8990@tool_cenote_CDS_0012	shell	ambiguous	low	2	0.005	GCA_005888215.1_00476
GCA_005888215.1|LNKO01000030.1@region_1_2020@tool_cenote	cenote	CDS	2	661	GCA_005888215.1	LNKO01000030.1	GCA_005888215.1|LNKO01000030.1	GCA_005888215.1_LNKO01000030.1	GCA_005888215.1|LNKO01000030.1	GCA_005888215_1_29	GCA_005888215_1_29	3	662	GCA_005888215_1_29_1	GCA_005888215_1_29_1	+	2020	.	CDD:COG3948	baseplate-assembly-protein	NGWEIGRVKTLKSPLMTSLEVKVSNIDVPSGGLVQESDDDYRKRILSAPEAFSTCGSVAAYDYHVRAVSQAIADVNVATPKGGLVRITVLTKEGIPDSRLLNDIKQYVSGEKRRPLCDTVEVKAPTQRDYQITATLKLLDGFREDIVKTKARDALQFYLSDKTKKLGLDVVPSALISALRVEGVYDVTLTSPQKIVVAENEWANCTAISVEVESERTNG*	hallmark_hmm	common_virus	NaN	.	0	2020	GCA_005888215.1|LNKO01000030.1@region_1_2020@tool_cenote_CDS_0001	shell	direct	moderate	614	0.93	GCA_005888215.1_00477
GCA_005888215.1|LNKO01000030.1@region_1_2020@tool_cenote	cenote	CDS	654	1223	GCA_005888215.1	LNKO01000030.1	GCA_005888215.1|LNKO01000030.1	GCA_005888215.1_LNKO01000030.1	GCA_005888215.1|LNKO01000030.1	GCA_005888215_1_29	GCA_005888215_1_29	655	1224	GCA_005888215_1_29_2	GCA_005888215_1_29_2	+	2020	.	PFAM:PF09684.9	Tail-protein	MARLRYPDIIARDAKYTALAELGQRLPQFKLSPIMTTLVDLLDDRFIEVLAEKWSVTGYDGLFLATTQESKKGLIKKSVELHRHKGTPWSVREVIRQLGFGEIEIDEGLKNRDYSANTFVNKIPSDERWAYYGIQLSKPVTNEQAVEIRKILRNFVPARCLLGVLDYKSAPVLYNNKVRYNKQYNHGSV*	hallmark_hmm	common_virus	NaN	.	0	2020	GCA_005888215.1|LNKO01000030.1@region_1_2020@tool_cenote_CDS_0002	shell	direct	high	569	0.998	GCA_005888215.1_00478
GCA_005888215.1|LNKO01000030.1@region_1_2020@tool_cenote	cenote	CDS	1255	2019	GCA_005888215.1	LNKO01000030.1	GCA_005888215.1|LNKO01000030.1	GCA_005888215.1_LNKO01000030.1	GCA_005888215.1|LNKO01000030.1	GCA_005888215_1_29	GCA_005888215_1_29	1256	2020	GCA_005888215_1_29_3	GCA_005888215_1_29_3	+	2020	.	CDD:pfam07484	Tail-Collar-Domain	MAGLNETNKWETEIYRIEENDPVHGGEDGITNKPIKQLANRTKYLKTEVEKRYIAQNASTEQTGLVQLDSNTDSDAEDKAATPKAVNVVKALVIAVRNALNNYIPNSKKSNADNSSSSDTIATSYALKKVRDIATKRATDTTAGQTVLSHKTNGTDKSKSASEFALGELNKELAGKGVPLGAVVSFPKGMNPRGYLRAIGGTFNRATYPDLYVANGNSDILPNLHRSDVGMTAYFAVDNIPTGWIAFDSIRTTVT	common_virus_hmm	common_virus	NaN	.	0	2020	GCA_005888215.1|LNKO01000030.1@region_1_2020@tool_cenote_CDS_0003	shell	ambiguous	low	198	0.259	GCA_005888215.1_00479
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	640	1074	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	641	1075	GCA_005888215_1_44_1	GCA_005888215_1_44_1	-	42467	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MARNTNTVILVGHLGSDPEIRQFQNGGQIATFNLAIGDDYRDKQGNTVKRTHWIPIVVHGNSADVARQYLQKGSKICVTGKLVQESWLDQNGNNRTALKVATQSFEMLDSKVSNETQQPSKDKEKPDPLSAAAEQDGFDDDIPF*	common_virus_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0001	persistent	direct	high	434	0.998	GCA_005888215.1_00697
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	1074	1718	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	1075	1719	GCA_005888215_1_44_2	GCA_005888215_1_44_2	-	42467	.	PDB:3SZ4_A	Exonuclease	MYQLKARCSGLADLMVKPKSGNGISATAKSAVRKIVKFDLFGYQDFEGNKYTEKGIALEEQAIKLSGRKRGLPLKKNTERRENDWITGECDIYVPSRKLIIDTKCSWDIGSHPFFADEAEEKAKKAGYDAQMQGYMWLWDCDEAHIDFILLPTPYDQLSSYDDPSRYIDLVEQIPQEKRITTVTIKRDEKIIEKIKERVEIAQEYYQQLIQEMH*	common_virus_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0002	persistent	direct	high	644	0.998	GCA_005888215.1_00698
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	1927	2610	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	1928	2611	GCA_005888215_1_44_3	GCA_005888215_1_44_3	-	42467	.	pfam10548	P22AR C-terminal domain. This domain was identified by Iyer and colleagues. It is found associated with pfam10547.	MTNLTILNNSIRSYGNLYSLNDLHQASGGLDKHSPFRFMRNESTQELISEMKNEMNTKSGVQKEAQGSDLIFKTLRGRNIQGTWVCEELVLSYAMWISPKFHLIVLRAFLAMHRNQPQQLALPEPEKKYTREFTEHDLQQLVWAWFALLRGTELCQVLHPALKQIGSHYAASVYSMAYEYRSTLRHAHNVLTRITEQFECEQGNNWRVLKYLRAYNPKATGFQLDIL*	mmseqs_cdd	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0003	shell	direct	high	683	0.999	GCA_005888215.1_00699
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	3151	3324	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	3152	3325	GCA_005888215_1_44_4	GCA_005888215_1_44_4	+	42467	.	PFAM:PF16777.4	transcriptional-regulator	MAMTKKEIQDRSDKKRGVRMVGFKLKEDIIQQLNALSERTGKSKTALIEEMILNYQG*	phrogs_hmm	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0004	shell	direct	moderate	167	0.96	GCA_005888215.1_00701
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	3538	4050	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	3539	4051	GCA_005888215_1_44_5	GCA_005888215_1_44_5	-	42467	.	PF15956.5	Domain of unknown function (DUF4760)	MDLNVIAGLGTCLFTGYLALFAWSQLKEQRKQHKQKATIELLINNNSNSYYRRRRQVYMKMRDQGTNFTSLACALSPNCSSDNEIKRQNFIVLDVLNSIEFICVGIKENLFDEAVYKRMSKSSVIKDWQTLKPYIMELRRINNNNTKLFCEFEWLATKWEQEKRKANNHC*	hhsuite_tools	nonviral_gene	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0005	shell	direct	high	512	0.998	GCA_005888215.1_00703
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	4267	5073	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	4268	5074	GCA_005888215_1_44_6	GCA_005888215_1_44_6	-	42467	.	.	hypothetical protein	MRTTKAELLELKQETESELEKLKLANELYQRNKKQAEEIEQWHKQADSITDDLIEWHKLGADRSKSIELLSKQSEIDKPKLERYKQEIEEMIALFKKQKQDIQDIIDDANRASMAGSFKTQSDDINRKMKWADGFLIGSLLATAGISYWGFYTSFNAENLFLWGQFVAKATISLPLLIVAWIKAKERAYLFRMREDYAYKYSAAMAFEGYKKQIQEQDPELQQQLLQIAIDNLGKNPTSVFDKELQSTPLETIIEGVGKRIDQAIAKN*	.	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0006	shell	direct	high	806	0.999	GCA_005888215.1_00704
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	5193	5327	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	5194	5328	GCA_005888215_1_44_7	GCA_005888215_1_44_7	-	42467	.	.	hypothetical protein	MYLDKSDIAIRIIEIGRAVLLGYFAGVNRGKAQILEQQNRSKED*	.	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0007	shell	direct	high	134	0.993	GCA_005888215.1_00705
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	5501	5602	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	5502	5603	GCA_005888215_1_44_8	GCA_005888215_1_44_8	-	42467	.	.	hypothetical protein	MSSENFPQEIENRDEFIKEFFAIQQQEVAVKRD*	.	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0008	shell	direct	high	101	0.99	GCA_005888215.1_00706
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	5909	6853	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	5910	6854	GCA_005888215_1_44_9	GCA_005888215_1_44_9	-	42467	.	PFAM:PF03837.13	RecT-protein	MTNQVQHQQNKQPPALKTFFESANVQNKIKELVGKNAATFATSVMQIANSNAMLKTADPMSIFNAACMAATLNLPLQNGLGFAYIVPFRNNKEKKTKAQFQIGYKGFIQLAQRSGQFKRLVALPVYKKQLIKKDFINGFEFDWEQEPEEAELPIGYYAYFKLMNEFSAELYMTHEEINAHAKKYSQTYRTYLDKKAKGQWAESVWAENFEAMALKTVIKRLLSKQAPLSVEMQQAVLADQAVVKDVENQEFNYTDNIQEAEFLAVVDEATFEQCKQSITNGETTLQELCDSGAYEFSQEQIAELEKVEKANLTQ*	common_virus_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0009	persistent	direct	high	944	0.999	GCA_005888215.1_00708
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	6866	7159	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	6867	7160	GCA_005888215_1_44_10	GCA_005888215_1_44_10	-	42467	.	.	hypothetical protein	MKPYADYYAQLNAAHQGKVDWQAGYEIALDEVATEIDNDLQQGDQTHYHELTEMLCDNDNFWLAIGSGASYEPYRQEAIKKIAERELNDRMNDYDPD*	.	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0010	persistent	direct	high	293	0.997	GCA_005888215.1_00709
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	7156	7503	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	7157	7504	GCA_005888215_1_44_11	GCA_005888215_1_44_11	-	42467	.	.	hypothetical protein	MKHSKTPLRQEKQSFTHFMKGSEKWLTRISYFLAALVISLIVGGISLDADANPTDWHDNELSLQIQQEAREKAKAQWREENGIYQANLTPQVNADIYRYVEQKQAEINRTLGEKQ*	.	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0011	shell	direct	high	347	0.997	GCA_005888215.1_00710
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	7587	8225	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	7588	8226	GCA_005888215_1_44_12	GCA_005888215_1_44_12	-	42467	.	PFAM:PF04383.12	KilA-protein	MSNLAILNTSIRSHENLFSLNDLHVASGGKDKHRPSFFIRLDTTKDLIAEIEQDNSNALKVIRGTQGGTYACEELVIAYAMWISPKFHLIVLRAFLAMHRNQPQQLALPEPQKFTFEFIEHDLQQLVWAWFALLRGMELCQILHPALKQIGSHYAASVYSMAYEYRSTLRHAHNVLTRITEQFECEQGNNWRVLKHLRAYNPKATGFQLDIL*	common_virus_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0012	shell	direct	high	638	0.998	GCA_005888215.1_00711
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	8535	8627	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	8536	8628	GCA_005888215_1_44_13	GCA_005888215_1_44_13	-	42467	.	.	hypothetical protein	MAENKPNAKELKRQAMLASRLAYQKARNQS*	.	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0013	shell	direct	moderate	92	0.989	GCA_005888215.1_00712
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	8841	9122	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	8842	9123	GCA_005888215_1_44_14	GCA_005888215_1_44_14	-	42467	.	.	hypothetical protein	MTELFIESEYHSIPHQFAEFRVANVDYIIDFSSDNDVIESLFSLDERLVPLLKNRKTYSVKFGIKEYYESTDPNIDLYAPPLNHQLKKQIFNT*	.	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0014	shell	direct	high	281	0.996	GCA_005888215.1_00713
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	9999	10943	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	10000	10944	GCA_005888215_1_44_15	GCA_005888215_1_44_15	-	42467	.	.	hypothetical protein	MVLNEQELSITFPQNLYYSTTKPLHIDDVIKSLRGLNALVKSTKPTLNTLFDVDIHNIELYVKSIEEGSLLEETFIKLFFNSQDEYNAFLQQIHNKFGDKAMKTTGAIILAVVSCFTIYGVYKAATAGSDNGTIAIDSYNTINNYYVDSSVWKQGAELAKMEPEEFKKTIEQNVRNRKAVAQNSLDVMYPVKDDDNAELFIGLDHKAELPIMPKDIAQATPHGRIEFASIEDVVDYDDIDIKIRALDLDNPKKGWAGIIPNIIDYRVKIEIANGVNTTKLKINKTIRADVSVEMKKDSSTGDLKATKIIIHKLR*	.	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0015	shell	direct	high	944	0.999	GCA_005888215.1_00714
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	11075	11767	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	11076	11768	GCA_005888215_1_44_16	GCA_005888215_1_44_16	-	42467	.	PDB:2FJR_A	Repressor-protein-CI	MSSLANRLKIARKAAGLTQDQLGKLVGVSQNAIQKIEAGGETKYTLALASVLGVDPIWLQSGEGKTPEKTTALSTELVTTQRDNEHRHRIDYLDVYLAAGISGIENSDYPEIISTLFLSDEGMARLVGKRSSQGVSIVNVPTDSMEPTIRKGDIVFIDTTINCYIGDGIYAFSINGELYIKRIQKLMSGGYRMISDNQAYPSEIISDEIYASAQFVGKFIRTVHIDVMNL*	common_virus_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0016	shell	direct	high	692	0.999	GCA_005888215.1_00715
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	11873	12121	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	11874	12122	GCA_005888215_1_44_17	GCA_005888215_1_44_17	+	42467	.	pfam15943	Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	MVVFIYCEKYKAMNEFVQKAIDTLGKQQILAEACGVSQNAVSKWLNGGAISLENALRIEKATQGKVKAEDISPEFSHLLSRT*	mmseqs_cdd	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0017	shell	direct	high	248	0.996	GCA_005888215.1_00716
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	12142	12438	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	12143	12439	GCA_005888215_1_44_18	GCA_005888215_1_44_18	+	42467	.	PFAM:PF10078.8	CII-like-regulator	MARNKLTRSARVLSDQVIEKYYKQKQYEVAEGMETTPSTLSRFISNEEFTQTFNFIAACQFGVFDTDTHIAIEKSEFEMLLLASQGFDQRLREKYLGK*	phrogs_hmm	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0018	shell	direct	high	296	0.997	GCA_005888215.1_00717
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	12486	13154	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	12487	13155	GCA_005888215_1_44_19	GCA_005888215_1_44_19	+	42467	.	COG3645	Phage antirepressor protein YoqD, KilAC domain [Mobilome: prophages, transposons]. 	MNQLLTITKENASILTMSSREIAEITHKEHKNVLRVIRDLIEQNLVAQIEPLKFEYRNQWFDYYELNKRDTFVVVARLSPEFTAAVVDRWQALENRQKPTALIPQSFSEALMLAAQLQAEKERNAPKVAFVDHYVEVGTSKSFRETAKILKMPERALVNRLVEDKYLYRQSGVLLPYQSAHTKDLFTVKTGTAEHGHNYTQTRVTSKGIEFIASRYASELML*	mmseqs_cdd	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0019	persistent	direct	high	668	0.999	GCA_005888215.1_00718
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	13151	13909	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	13152	13910	GCA_005888215_1_44_20	GCA_005888215_1_44_20	+	42467	.	pfam13730	Helix-turn-helix domain. 	MSMRLMVQAMNCKVGNPARKLVLLKLADNANDDGICFPSYQYIADKCEMTRRSAISHIECLIKMGLVSKKERKNKDGSISNLYFLHLEQGSENFALGGENISLGSEKFALGGSENISPITSHSLEPVNEPKKTTQKSESEMLLERFGITGQLAKDFIAHRKTKRGAISETQLSRLQKQADKAGISICEVVEICIERNWQGFNAAWDWRDEKLRPNSPHLGQSHPNKPKFDDTQTGWSAGMNFTVDGTQWQIP*	mmseqs_cdd	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0020	persistent	direct	high	758	0.999	GCA_005888215.1_00719
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	13894	14535	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	13895	14536	GCA_005888215_1_44_21	GCA_005888215_1_44_21	+	42467	.	PFAM:PF06992.10	Replication-protein-P	MANSITQNQINTLPPERAQRAEETINWLFNELKSIFPGWRAAFETEADYLSAKKTWLRVLVREKITRPQLENGLCEAEKSLDKFLPSVGLFVYWCKAYDYHALGLPNEAELYQRYNTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKAIPKLLTKAAEKVRSNFPFEDIPKMIPTKPRFYDKAKADKARDSLMAMMKGKGALQ*	rep_hall_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0021	shell	direct	high	641	0.998	GCA_005888215.1_00720
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	14532	14756	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	14533	14757	GCA_005888215_1_44_22	GCA_005888215_1_44_22	+	42467	.	.	hypothetical protein	MTSYKCPKCGAELEDFYTPDYFISSSEWEDDRFRCNGHLIEPIPFPQVSKYSAVNRTKSCGYFGLEDLGVEYKE*	.	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0022	persistent	direct	high	224	0.996	GCA_005888215.1_00721
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	14793	15209	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	14794	15210	GCA_005888215_1_44_23	GCA_005888215_1_44_23	+	42467	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPIDDKKPLVVKIQPITRSLGQNSKLHALLSDISKQCEFNGKKRDIDTWKMIMVSAHKIATGGQAEMVIGLEGEVINLRESTAQMSVKRLASLIEYITSWGVQNGVRFNDRWGL*	mmseqs_cdd	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0023	shell	direct	high	416	0.998	GCA_005888215.1_00722
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	15302	15844	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	15303	15845	GCA_005888215_1_44_24	GCA_005888215_1_44_24	+	42467	.	PFAM:PF05766.11	NinG-recombination-protein	MAKEYKCKVCAQPFVKTFSSTQKVCSPECAIKLARDNAQKAQERAEKKKQRERKDKLKSRSEWLKEAQSVFNKFIRLRDKDQPCISCGRYHQGKYDAGHYRSVGACPELRFCELNVHKQCAPCNDHKSGNIIEYRINLVNKIGADKVAWLERQDHEPKKYTIEDCKAMIKYYKAKIKELT*	common_virus_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0024	shell	direct	high	542	0.998	GCA_005888215.1_00724
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	15841	16212	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	15842	16213	GCA_005888215_1_44_25	GCA_005888215_1_44_25	+	42467	.	PFAM:PF06530.11	anti-termination-protein-Q-like	MNIDVISVEFGYWATPRYETEFPRVAAGFAEMKCDARYAEKYRMRPISDELGMEIDGYLGVIRKVTPELYDVFVLTYIKRWEKQEIWRYLHISRREYFNRLKTVKTSLLLLLSTEGKQCLFIA*	phrogs_hmm	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0025	shell	direct	high	371	0.997	GCA_005888215.1_00725
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	16312	16494	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	16313	16495	GCA_005888215_1_44_26	GCA_005888215_1_44_26	+	42467	.	COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family [General function prediction only]. 	MHSGGLIKELKANGCYFVRHGKGDHQIWFSPKTGKRFPVPHPKQDLAIGTLKSIKKSAGL*	mmseqs_cdd	nonviral_gene	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0026	shell	direct	high	182	0.995	GCA_005888215.1_00726
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	16526	16975	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	16527	16976	GCA_005888215_1_44_27	GCA_005888215_1_44_27	+	42467	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MIFTVGVETPENENQAYGMIVPALCQLDYGCFSGADDVDDLLPMVTEAITMMLEAMVEDGFDLTTLKDKGVTHYKADPEYAYFDTWLLVDVDISEYLGKKQRINVSLPEYLLTRIDRRVAAMGNYYKDRSHFLANAAHRELHAHSNKEM*	mmseqs_cdd	nonviral_gene	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0027	shell	direct	high	449	0.998	GCA_005888215.1_00727
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	17020	17202	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	17021	17203	GCA_005888215_1_44_28	GCA_005888215_1_44_28	-	42467	.	PFAM:PF16777.4	transcriptional-regulator	MAMTRAEINAKSDKKRSVRLQSYKLHEDIIKLLAELSEKTGKSKTAIVTEGILAMEKAYK*	phrogs_hmm	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0028	shell	direct	high	182	0.995	GCA_005888215.1_00728
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	17451	17678	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	17452	17679	GCA_005888215_1_44_29	GCA_005888215_1_44_29	-	42467	.	.	hypothetical protein	MAIKLNENTNFTHKKTAMLSGADFRFVLRLRALIKIIMKNPLGCQGAFCNYSLLILGVRLWITTTKYDKKTCVDL*	.	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0029	.	unmatched_CDS	none	0	0	.
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	17840	18739	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	17841	18740	GCA_005888215_1_44_30	GCA_005888215_1_44_30	+	42467	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MTNQISTQTVSFNNQSLITIEQNGVHYVAMKPICENIGLAWEPQVLRIKRDEVLSQGMIVMIMVAEDGKKREMICLPIEYLNGWLFGIDINRCKPEIRGTLIKYKKECYQALHDYWFNGKAERKTTVDDRTGLRNAVNMLVSKKGLIYSEAYHLIHQRFNVESIEDLTLEQLPEAVEYVHRIILEGELITEAELPNREKKYTREFTEHDLQQLVWAWFALLRGMELCQVLHPALKQIGSHYAASVYSMAYEYRSTLRHAHNVLTRITEQFECEQGNNWRVLKHLRAYNPKATGFQLDIL*	common_virus_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0030	shell	direct	high	899	0.999	GCA_005888215.1_00730
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	19357	19530	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	19358	19531	GCA_005888215_1_44_31	GCA_005888215_1_44_31	+	42467	.	.	hypothetical protein	MIKYNRTKLKIHPKEGLNMETYSTPVIRGAIAFAIVALAVGICLLFATPFISAVRWW*	.	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0031	shell	direct	high	173	0.994	GCA_005888215.1_00733
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	19726	20082	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	19727	20083	GCA_005888215_1_44_32	GCA_005888215_1_44_32	+	42467	.	TIGR01594	phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions]	MPIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPAIRYVLIDAAMCASIAGVAVPICTHLFGHTEYSSFLGTMIGFVGTEKIREFLFKFINRRIEKDDNDDFRRDI*	mmseqs_cdd	nonviral_gene	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0032	persistent	direct	high	356	0.997	GCA_005888215.1_00735
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	20060	20653	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	20061	20654	GCA_005888215_1_44_33	GCA_005888215_1_44_33	+	42467	.	PDB:3WH1_A	Chitinase-	MISEETFNKIFPHAVKGVYQAISTQIEKAGCVNKMQQAMFLAQCGHESGGFTRFKENLNYSWLGLSKTFRKYFPDPLIAKKYERKPELIANRVYANRLGNGDEKSGDGWKYRGRGLIQITGKDNYAAFRKWLGRDIEPEDVAGNLDLSVKTAVWYWKCYELAELNSVEKVTRRINGGLNGIDERCKLYRALMVTDND*	common_virus_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0033	persistent	direct	high	594	1.0	GCA_005888215.1_00736
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	20646	20969	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	20647	20970	GCA_005888215_1_44_34	GCA_005888215_1_44_34	+	42467	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MTKYIYIALGAVVVVLIGVLRYQSSVIDELEITTKQQENTIQQQEDANKSLSLALQQERYAIIEQQERNNEIERIATENAESVKTIIKTQPCAHTRLPQSVLDRLHE*	mmseqs_cdd	nonviral_gene	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0034	persistent	direct	high	323	0.997	GCA_005888215.1_00737
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	20920	21162	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	20921	21163	GCA_005888215_1_44_35	GCA_005888215_1_44_35	+	42467	.	PDB:5CYB_A	Lipoprotein	MLTLVCLSLFLTACTNKITTKPEYIYPLQAYTAPCVKTAFTGETYGDVVIQLVKVTAERDKCASQVDHLNKWINQAKGGK*	common_virus_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0035	persistent	ambiguous	low	51	0.21	GCA_005888215.1_00737
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	21164	21541	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	21165	21542	GCA_005888215_1_44_36	GCA_005888215_1_44_36	-	42467	.	COG1396	Transcriptional regulator, contains XRE-family HTH domain [Transcription]. 	MFLLKRLKKEMNALTNIQYINNEQGVPAFAVMPIATLNWLKEKANFSDPIETGIPESVAKLALLNDYSALRAWREHLGLTQAEVASRLGISQAAYSQHENSQTLRKSTRIKIATALGINSAQLDF*	mmseqs_cdd	nonviral_gene	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0036	persistent	direct	moderate	348	0.921	GCA_005888215.1_00738
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	21809	22324	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	21810	22325	GCA_005888215_1_44_37	GCA_005888215_1_44_37	+	42467	.	PFAM:PF03592.15	Terminase-small-subunit	MSDVKGKSTSGRGLTPKQEKFCQLYIELGNASEAYRQSYDCSKMTTEVINVKASELLNKNGKITVRVEELRQAHQQRHNLTLDNIIADLQEYRDICMGRKPLTITTVVKNAQEGTAQSVNTECFVFEPTGANKALELLGKHLGMFTNKVDVTTDGKPLPTVINVTFSDEPA*	hallmark_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0037	persistent	direct	high	515	0.998	GCA_005888215.1_00739
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	22311	23654	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	22312	23655	GCA_005888215_1_44_38	GCA_005888215_1_44_38	+	42467	.	PDB:4IDH_A	Large-Terminase	MSQLNIQFPTKFRPLFESIWRFIIFYGGRGSGKSFSIARALVLRAYQSPVRVLCCREIQKSISDSVIQMLADQIEMLGLQAFFDVQKTQIIGQNGSRFTFAGLKTNITSIKSMTGIDVVWVEEGENVSKESWDILIPTIREDGSQIIVSFNPKNILDDTYQRFVIHPPERCKSVLVNWQDNPYFPKELMEDMEQMRERDYELYRHVYEGEPVADSDLAIIKPVWIESAVDAHLKLGFTTKGMKKVGFDVADEGADANANAFVHGSVVLGVEVWKNGDVIDSANRTNQSAVKFKADLIIFDSIGVGAGVKAHFKRLPKSLQVEGFNAGGAVAYPEREYIKDKKNQDMFSNIKAQSWWALRDRFYKTYRAVKYGDVYPDDELISLSSKIKELEYLKAELSRPRVDYDNNGRVKVESKKDMKKRGIPSPNMADALVMCYAPTKPKSLLDL*	hallmark_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0038	persistent	direct	high	1343	0.999	GCA_005888215.1_00740
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	23656	24987	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	23657	24988	GCA_005888215_1_44_39	GCA_005888215_1_44_39	+	42467	.	PDB:8HDS_J	Portal-Protein	MNILDGIKSLALKLGSKQDQTYYARGLSLTDDLMQIEALWRDNWIANKVCIKRSEDMVRNWRDIFSNDLKSEQLDEFTKLERRLKLRETLTKALQWSSLYGAVGLLVVTDTINITSPLQPTERLKRLIILPKWKISPTGQRDDDVFSPNFGRYSEYTIIGGTQSVLVHHSRLLIINANDAPLSDNDVWGVSDLEKIIDVLKRFDSASANVGDLIFESKIDIFKIAGLSDKISAGLENDVAHVISAVQSIKSATNSLLLDAENEYDRKELSFGGLKDLLTEFRNAVAGAADMPVTILFGQSVSGLASGDEDIQNYHESIHRLQETRLRPVLEVLDTLLCNELFGGQPDDWWFEFLPLTVVKQEQQVNMLNTFATAANTLIQNGVVNEYQVANELRESGLFANISADDIEEMKNADELARNFEEPEGESTQVQASEDEQENGALV*	hallmark_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0039	persistent	direct	high	1331	0.999	GCA_005888215.1_00741
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	25016	26449	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	25017	26450	GCA_005888215_1_44_40	GCA_005888215_1_44_40	+	42467	.	PFAM:PF04233.13	Minor-capsid-component	MTDDVERALQQPQGSFFMDDAKGFQAISAKALMKVLEKYEKSDRTSQAENIANGFVGRGDAQNHAEVSTNLKNQTGIDLSAYLRNSPNIAERVNALTAGNIQLIKSIRSQYLDKVQNAVMQAMVRGSLNKDLTAQIKDLGKTTEKRAMFIARDQSSKLNAALTQARHEEVGIKKYMWSASLDERVRESHAEKDGQIFEYSNPPADTGHPGHDFNCRCVQIPVLDNNEQIVKNSPIVSQQEKQQMRSEWSDDFPDTIIDRKLGDATSHPLYENAKKGSIEDAYQLAKDLVTDDAVNKLKQLVGNKNAILIPVHAEEAVGQNMIPVAIATVLSKKLHIPVDLSIVQATKVSRTGGDGWHRLVYSPAFDGIVPKDKYAIILDDTQTQGGTLASLKGYIEENKGKVIASYALTGKQYSVQLRLSKDTLAELRSKYGELESWWKKEFGYDFSRFTEWEARFIINSRKTPDEVRNTILARKQA*	hallmark_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0040	persistent	direct	high	1433	0.999	GCA_005888215.1_00742
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	26728	27084	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	26729	27085	GCA_005888215_1_44_41	GCA_005888215_1_44_41	+	42467	.	pfam10711	Hypothetical protein (DUF2513). This family is found in bacteria. The function is not known.	MKRNWDLIRSILLKLESQSEARGSLLPDGFTGFDSETVSYHFKLLQSAELIEAIDYSSLNEMSLIARSLTWQGHELLDKIRNDTVWNSLKTTIKSKSLDLSLDTIKQVAQTIISQMLA*	mmseqs_cdd	nonviral_gene	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0041	persistent	direct	high	356	0.997	GCA_005888215.1_00743
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	27146	28246	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	27147	28247	GCA_005888215_1_44_42	GCA_005888215_1_44_42	+	42467	.	PFAM:PF09979.8	head-maturation-protease	MKFTDKTTQAVTQRTITKDGFLVVPATISKVGVFDYLATELGLKEDGIKKVARTEKSLFSDETIKSFENATLTVGHPKDGVNAKNWKQLSVGVVRNVKRVGDELTAEAWIYDEQAIKTVQEHGVEQLSCGYDCDIKPSTVQDADFEMSPMIGNHVAIVAKGRCGGSVKLADEDKTIMGKTAKILDAFLGAFGIKLSDEQKKQIEDEEKSGSEEGKEPKGEQPTEPKEKQSKPEDKKDEEVNKEEFEKQLKAKDAEIQQLKDAQAKRDAEVKQAAVLADAKTAFKEVNFADNATVREIQESAVVAQGIFTKDEAAKLSDEEISGAYQTAKAVVAKLADERKSLGSILLGDAESKAAPKIDFNKTYNS*	phrogs_hmm	nonviral_gene	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0042	persistent	direct	high	1100	0.999	GCA_005888215.1_00744
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	28259	28699	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	28260	28700	GCA_005888215_1_44_43	GCA_005888215_1_44_43	+	42467	.	PFAM:PF11133.7	virion-structural-protein	MSYAYEQAPARAGELGKGNLASAKTTAEKVTGKVKAGEFVALNPTGGVKALSAKKDILAGVVLASRIRDEWPEGELVDVMHIGAGDAIWVNIASEKTVSRGSKVFVLTTGGEGKAGAIQGETDANAIETGYTVIDVKGQLAMITKL*	phrogs_hmm	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0043	persistent	direct	high	440	0.998	GCA_005888215.1_00745
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	28709	29623	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	28710	29624	GCA_005888215_1_44_44	GCA_005888215_1_44_44	+	42467	.	PDB:5WK1_D	Major-Capsid-protein	MSLLTYVQNGLTAVSKEISETKYPEIVFPQFVYVDQQAAVGITEKLHYGADEHGSLDDGLISTGTSTLDQVEVGFTPTRSYIVQWAKSVTWATPELEQGKLLGLALDTAKIMVLNQNAQQTLQKVAFLGHAKDTRLTGLLNNPSVEVYNIKGTSANTKVQAMDFDKSVAFFKEMFLAGMEKTKRIEAPNTFAIDLLDLAHLALTQRNNTDTTALEFLTKSLSAAAGRDVAIKALPSNFGNRVTSGKTRAMVYVNSKEHVIFDVPMSPTVLAAQPKGLLAYESGLRMAFGGVTFMEPDSALYVDY*	hallmark_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0044	persistent	direct	high	914	0.999	GCA_005888215.1_00746
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	29633	29995	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	29634	29996	GCA_005888215_1_44_45	GCA_005888215_1_44_45	+	42467	.	PFAM:PF13262.5	head-to-tail-adaptor	MPTFETYVFIERYPEFKEVDYEKIDLFLSDAEMEVSQSRWGKLYQRGVLTLTAHLLRLSLWTTEGGGGANRNLASESAGELSVSYAVPTLTGTDADYQLTAYGQEYLRLRKLVGIGVMVA*	hallmark_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0045	persistent	direct	high	362	0.997	GCA_005888215.1_00747
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	29996	30442	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	29997	30443	GCA_005888215_1_44_46	GCA_005888215_1_44_46	+	42467	.	PFAM:PF05069.12	Virion-morphogenesis-family	MAVQITGNLAQAKALIERLRADKDKAVYIGFPAEFDKPVEGAENFNLASLAAVLEFGNERIPSRPFLRQTLSENQEKYTALFTQLFKQGLQIERIYEQLALVAQGDVQLNIARGNWVANAKSTIKQKGSSKPLIDTGKMRQSVKGIVK*	hallmark_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0046	persistent	direct	high	446	0.998	GCA_005888215.1_00748
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	30734	31237	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	30735	31238	GCA_005888215_1_44_47	GCA_005888215_1_44_47	+	42467	.	PDB:5A21_G	tail-completion-protein	MDTTTISALDTAKLRKWIQQALQLPNGAVIGGWLPENPLPAFITVDLMMSNEIGQATREFDGKRERIIQSMQSTVSLSCFGRNSLAQCYKLKAIFQSSAFLSFLKSNHWGVIRFSDVRNLTATVGADYEERGQFDVVFSHHHIVDTPLDPIANVEQRTNHLIQQIGG*	hallmark_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0047	persistent	direct	moderate	359	0.712	GCA_005888215.1_00750
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	31242	32750	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	31243	32751	GCA_005888215_1_44_48	GCA_005888215_1_44_48	+	42467	.	PDB:5LI4_E	tail-sheath	MALSISQIVNVQLNTMPKSAARKSFGIVALFTPEAGQAFADATTRYVYVENQRDVEQLFGTNSETAKAAQPFFAQSPRAKQLIIARWQKEPATIDATKNTLSGATLSDDLERFKAVVNGRFTLTIGAETKKVNGLSFADASDFNAIATKIQAKLTALSSSLSISYDSVGQRFIITSNTSGEDKATEIHYAFNGGGDGEYIGSLLKLENGQASRKVGKASISLKKETVAEALFNVAEVNNAWYGFTFAAQLTDGEVESAAKYAQANTKMFGANVIRVEQLEWSANNIYKKLYDAGLDHTLAMFDKNDMYPASSALARLLSTNFAANNSTLTLKFKQQPTITADEITATEFSKAKRLGINVYTYFDDVAMIAEGTVMGGKFADEIVILDWFTDAVQKEVFARLYKSPTKIPLTDKGQAVLIAAVEKVCLEGVNNGAFAPGQWTGDSFGNLTTGDYLEKGYYVWAAPMDTLSDSDREQRRATPIQTAVKLAGAIHSSDVIVNYNR*	hallmark_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0048	persistent	direct	high	1508	0.999	GCA_005888215.1_00751
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	32995	33426	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	32996	33427	GCA_005888215_1_44_49	GCA_005888215_1_44_49	+	42467	.	PFAM:PF11681.7	virion-structural-protein	MAVFDPKQVVVLLDGKEMSDWADGSDVINATNQVDAGQMVIGANGTGVFIANPDQSGKLTLKIKQHSEDNAYLSKLFNQQKTSIKTYLPMTLAIRDLINDDVVTASKGYFTTPAAYMRGNGHNATTWTIVFEKMTMNLEKGVQ*	phrogs_hmm	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0049	persistent	direct	high	431	0.998	GCA_005888215.1_00753
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	33426	33836	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	33427	33837	GCA_005888215_1_44_50	GCA_005888215_1_44_50	+	42467	.	PFAM:PF10876.7	Phage-tail-assembly-chaperone-protein	MESKQINIENVTYTMTPANAMTAWTALKNAMKLLQSVDLSSLGNNKKLGASVLTTVLANLGDTSIKELEDIVLKHTSCEQDGKLYRLSERFDSHFNQHRGHLIPVLKEGLMYQFADFFIGGGGLLSNIQPNLKATK*	hallmark_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0050	persistent	direct	high	410	0.998	GCA_005888215.1_00754
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	33987	36077	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	33988	36078	GCA_005888215_1_44_51	GCA_005888215_1_44_51	+	42467	.	UniProt:tr|A0A0A0YSN4_9CAUD	Tail-length-tape-measure-protein-	MLLDELLIKIGIDADSQAMQQFEQFLNVIGDGTESAAENLGTFAEVLERAVDDATEQIKAAPEFESFFDSLEKLQAETENLSEDDALDEWVQKLIEGDKLLSEFGESFLQNTEQLSKELQEAGLSAEQVEKVIGKLKSAIEQKTDATEKDTKAVEDNAKSTENLSDNIIDLWATQYGAVGLLNKFELLGISINKTTLKVAAFGAAFYAATIGVKNFVDANLDALDEIKQLSAVTGESADQIYNLGKVAEVNGSSAQAAQSSIEGLSRVIGEAAAGIGRGAKSFEQYGLSAKKANGEVKTSSEMLGEISDKMKAMGEQEQIAMLAKLGIDSSMIQTLRLGNDELKEQIALASVLTLGVGNAENAKTAASFKDALTQVSQAFRAIGEYVSLRVAPSIQRLAERFTKWFTENNDFIKATLNGFGKILSFLFELAAAIDNVVEHTIGWKNLIYALGAALLWFSRRMLLAFATNPVTLIIAAIAGLFLLVDDFITYLESGETALGEFWKPFKTALLWVKSTWKNFVDNFSVDPIGETLSLITDMLELPFKLGLALVVGLWNLFTGEQLDLDVIETKFAQVTDWIKKPFQSAFDWVKGYYDQYIAPIVDTVKGWFIDSGEKVGTASQNTKAYDTMMYDPSYTSAPQVAAVGAKSQTSNADNRVTNSNNKITITQHIQGTDNPKAVADQSVRVINHQLSSVVG*	hallmark_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0051	persistent	direct	high	2090	1.0	GCA_005888215.1_00755
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	36083	36859	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	36084	36860	GCA_005888215_1_44_52	GCA_005888215_1_44_52	+	42467	.	PFAM:PF06995.10	tail-fiber-protein	MLNFAQVSNRKIGKITFDVVTTEDHQSDLFITENPIESGAAIADHAVIQPKQVTINGVMVDHDHSTFGLDLPFIGNIRGGIDFLNNFPLPVKVITQTSQSIARAGRVISQVSGAYSQAKRTLNQARIIAPFLPDFGLGGLLDSSAGDSRVQKCYADLVACQKSGETIDIQTGINLYKNMLIQSVAVNQSQDGSATFTITAREIFIVETQTAQSKSSASGKRKSGRSSIQSATKSQQGSTQPKNDTPKRTSSLFNLFKW*	phrogs_hmm	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0052	persistent	direct	high	776	0.999	GCA_005888215.1_00756
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	36865	37173	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	36866	37174	GCA_005888215_1_44_53	GCA_005888215_1_44_53	+	42467	.	7KH1_B4	Myoviridae, Phage, Baseplate complex, VIRUS	MLKIPLTQHPYQEQTFEFNGIKIRLTLRFNSIGQFWAMDVFESVNQKQICRGHAIACGVPLLARTTQPYFFYLDDESGAELDPMSMEDLGTRCFLYIGEKAS*	hhsuite_tools	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0053	persistent	direct	high	309	1.0	GCA_005888215.1_00757
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	37256	37435	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	37257	37436	GCA_005888215_1_44_54	GCA_005888215_1_44_54	+	42467	.	.	hypothetical protein	MSKYSKTKLKIHLKEGLEMETNASPIMRGAIAFSIVIVALGLFALCITPLANVLIELAK*	.	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0054	shell	direct	high	179	0.994	GCA_005888215.1_00758
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	37450	38322	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	37451	38323	GCA_005888215_1_44_55	GCA_005888215_1_44_55	+	42467	.	PDB:1WRU_A	Tail-protein	MKQFGRRWKLDISNDQETLSIEQLRVAFEIDKTINEKPNPAKIQVWNLNRDHINQLLSQDYKKVALSVGYGELRQIYAGDITKTRIQREGLDFVLTLECSDGHQAYTQSRAKTTLKAGATDKQIVEELQKTMPKVQSGAIDIPNQRKLPRGRVLNGNSRDILNKIARNNKADWSIQDGALIFLPKDKVLNDDAVLISQDTGMINAPEQTDEGLELTCLLNPALQIGGLVKVESIIEYFNGEYKIVKLAHSGDGIGGDWHSKMTVVGGKFQKVEKEKGSQTSNKQSKDKNK*	hallmark_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0055	persistent	direct	high	872	0.999	GCA_005888215.1_00759
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	38319	38963	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	38320	38964	GCA_005888215_1_44_56	GCA_005888215_1_44_56	+	42467	.	PDB:4RU3_A	phage-baseplate	MNYAQILATPETATDHQIQQNQLNLHTALPAKVVSFDPAKQTVSLAIQIKMQLVDGSGADIPPLLDVPVSFPRGGGFAVTFPLKAGDEGIAIFSERCIDGWWQNGSVSTPLDFRLHDLSDAMFIPGICSVPKAIGGFFTDGLSMQTLDGSTYIRIKNGSILIKGNIEHQGDTSQTGSHSSTGVISSDTDVTAGGISGKTHKHTGDSGGKTGVPE*	common_virus_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0056	persistent	direct	high	644	0.998	GCA_005888215.1_00760
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	38960	39313	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	38961	39314	GCA_005888215_1_44_57	GCA_005888215_1_44_57	+	42467	.	PFAM:PF10934.7	baseplate-wedge-subunit	MSVRRLNKEHDWTFGQGFSNYASESDAIVQNVQTRLWSFANDWFLDLEHGLPWLEQMGRGVNMAGWEIKIKRYVLETEGVSRITDYQANFDTDTRKLTISIDYQDIYGQQQTARYDA*	phrogs_hmm	hypothetical_protein	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0057	persistent	direct	high	353	0.997	GCA_005888215.1_00761
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	39498	40016	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	39499	40017	GCA_005888215_1_44_58	GCA_005888215_1_44_58	+	42467	.	pfam10547	P22_AR N-terminal domain. This domain was identified by Iyer and colleagues.	MQTLTAEFLGKEVTLVDNNGVAYVAMREIVEGIGLDWKGQHKKLMEQSEKFNCGHITTVAKDGKNREMLCIPIKKLNGWLFGLNPNKVRADLKERLENYQEECFLALWDYWTEGIARRDEVKNKLALWQQKKAEYTQRATERGKLLQQCKSEKQALERELLQIKQLDLFVNL*	mmseqs_cdd	nonviral_gene	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0058	shell	direct	high	518	0.998	GCA_005888215.1_00762
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	40059	41201	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	40060	41202	GCA_005888215_1_44_59	GCA_005888215_1_44_59	+	42467	.	PFAM:PF04865.13	Baseplate-J-like-protein	MAKLIETGIQIERLNEIVARFEDGFRQIYGQNIDLSPNSPDGQMVGLLAQMKMDIEELAENVYRQLDPDVATGAWLDQRVAYAGLRRRAASYSYLRSVILTGEPLTHLYAGIVVSDPHKVRWVLTADVQLDSNGSARADFRSEELGAFNLIKNTNLTIETVTLGLNSATTFENAEIGEEEETDLQLRERFFISRTKNAQNSADAIQSKIAALPDVRQVKVLENNTKQRDKYGVEPNSLNIIVDGGADEQIAHVIYENKGAGVGLQGATETTLTVNGERRALRFDRATPVDVQVSMRCVRYEDFTEVDKDEIKRLLSIQHFEIGQNLSLSRLYSPINEVGGFWVKELKIGRKGRSLTTENITAQPRELIRILATDITIEVE*	hallmark_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0059	persistent	direct	high	1142	0.999	GCA_005888215.1_00763
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	41201	41776	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	41202	41777	GCA_005888215_1_44_60	GCA_005888215_1_44_60	+	42467	.	pfam11041	Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	MGYSDLLIWQYRNKPKAVSTIKLFESIIGQGFIDLYRLQDVLNIETATGHQLDLVGKHVGQFRVINGYQLRKFFGFRNSPNALGFSQKRLGGAQWYRKRDPLSDSVRLSDDDYRFLIKCRILKNYQIGTLPNLIEACLFIFGEDCHIVDNYDMTVSISVPSASTSDFKRFAINHLDILPRQAGVQYLFNLI*	mmseqs_cdd	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0060	persistent	direct	high	575	0.998	GCA_005888215.1_00764
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	CDS	41786	42466	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	41787	42467	GCA_005888215_1_44_61	GCA_005888215_1_44_61	+	42467	.	PDB:2FKK_A	Baseplate-protein-	MALVNKPDESIFASSAKQGEVDNFPDLLRGWGITLDQTQGIPPMEWFNFLFKRLDEKHTYLMQRGLPEWSATQDYTKGSCVQFNGISYRALKNSKNNSPNESDSQYWVRWGFALSEIARATLQQYGIVQLSSATNSDSETEAATSKAVKTAYDKAVEAKTTADGKVGLNGNESINGEKTFENRIVAKRNIRISDSPHYASRGDYLNIGANDGDCWFEYKSSNREIGT	hallmark_hmm	common_virus	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_CDS_0061	.	unmatched_CDS	none	0	0	.
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	1	1418	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	1	1419	GCA_005888215_1_61_1	GCA_005888215_1_61_1	-	28128	.	PDB:1OCY_A	Tail-fiber	MKLKLIDLFKRITWAKNGDLTDFSQTNYEAGWAHLGDDTPTVQDFNYVQQMNDKKDQWLFNQLKAVLEKANIEPTEENVNSLRDAILALSKGYSHPKSLTADTVNFVDEQGHTHEIAKATLQQQGITQLYTGYNSQREDLALTPKTAYQLKQLIDSNTRSLDNVIPNSKKSSAVNSNSADTVANSAAVKTAYDKAVEAKTTAESKVGLRGNESIQGTKSFESKIIGFRGIGVADSQTYANANHLLNMGANDGDGWIEYKKSNRVIGTIRIRANGELSYNNQKIYHAGAKPQFNTDIEGKPNTLAGYGIGNFKVEEFRGNLNTLKTDGIYAITQASRSQNLPVSTSCHIQVIAGGDGAWCRQLAYVAYSTDVYERHQTSYQTDSWSAWKKLNTDGIPTGAVVSFPRAVTNPVGFLKASGSTFNQQTFPDLYRVLGNSNKLPDLTRSDVGMTAYFAVDNIPTGWIAFDSIRTTVT	hallmark_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	1428	2042	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	1429	2043	GCA_005888215_1_61_2	GCA_005888215_1_61_2	-	28128	.	pfam11041	Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	MKDILTALNDDFKQLGRERLLSQFNYSPNLNAFLSLLLLPHHEIQATLKQMLTERHIDTAIGKQLDGVGDIVGMPRPFARVNGDWYFGFSGQSKAKPFSRAPIRDLATQTNSRDFNYMLDEHYRRLIKWKVIANHSHGTLDDVIEACRAIFLAERVSITEGQDADVHITITRMAKNRLDAVEQEPVLWIPTAAGVKVTVEFINA*	mmseqs_cdd	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0002	shell	direct	high	614	0.998	GCA_005888215.1_00975
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	2051	3487	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	2052	3488	GCA_005888215_1_61_3	GCA_005888215_1_61_3	-	28128	.	PDB:5IV5_GD	Baseplate-wedge-protein	MANYGLTRSGFVRKRMPEQLKELYENAKKMFGEDIDLSPETVMGMMLNIESERFATLWELIESVYSAMYPMSATGANLDRAVSFTGVTRLQAEHSTVPVIFYGNAGVEIPQYTAVRNAATQTLYYSDEDARIDSNQAAYARIELNSNTINVGDVFSVVVNGVTYRFTAMRSSSASIIQGLANQLKAISYADVSNDNVIIEISAQSIPHFSISVSQNLTLSRLGVRCMLSTESPSEDKADIGQMIELVNMIDGVVEVNNVVEGASGRLEESDIELYQRYHRGVWQNGAGTIDSLYANLSKVAGVHSLRIYENDADQTINGIPKRSLYAVVKGGLDTDIASTLLKFKPLGIGTHGQTEVTVRDSQNQPHLIKFSRPTKCYIWLKVTIETFVDEDEIARAGYIVSALNNILKYGKSLGVGADVIHQRLIAACIAVQGVGKVTVQIGKTNNITDPEPRYQEQNITIAPDEEAIFDPSIIVMS*	hallmark_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0003	shell	direct	high	1436	0.999	GCA_005888215.1_00976
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	3480	3845	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	3481	3846	GCA_005888215_1_61_4	GCA_005888215_1_61_4	-	28128	.	PDB:5IV5_BD	Baseplate-wedge-protein	MIDLKLSGQHDLMIKDRKLVLVDGVNQKAQQIKVVLLTFLGEWFLDTTIGLPYFDEILTKNPDNARIQSIFRKKIMGVKGVLAVERLSLEFHLKDRVLAVQFSARTNEGVVKDKVSIKRNG*	common_virus_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0004	shell	direct	high	365	0.997	GCA_005888215.1_00977
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	3842	4513	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	3843	4514	GCA_005888215_1_61_5	GCA_005888215_1_61_5	-	28128	.	PDB:4RU3_A	phage-baseplate	MTDILTALSEINVSLPGKIVSYDAGTVRATVQPSIPKRLANGEVLNAPQIVNVPVMFPMADINGAVAQVTLPVKVGDGCLLIFSQRSLENWLSGSNDAPDDPRMFDLSDAFCVMGGNSHSPNADVENLCIKYGSGKIKIAPNGNITINSPDVRVTTDNFTVTAPTSTFNGNVIVNGGISTAGDSGSVSVSGSLTTTGDVMADGVSLQSHKHKGDSGGTTGAPL*	common_virus_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0005	shell	direct	high	671	0.999	GCA_005888215.1_00978
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	4510	5472	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	4511	5473	GCA_005888215_1_61_6	GCA_005888215_1_61_6	-	28128	.	PDB:1WRU_A	tail-protein	MSYRFLRSYKLMIGKKGQKDAIVIEPPMRIEFDIEKDCEAEPNENTIKIYNVASTTRKTIEQPDMRCVLYAGYEQEGNVLLCSGDIATAYSYHQGADWVTELYVLDGLVEIRDTAVSLGYGGGVSSTQITNDIAAKMGVTVVGADNLKSRTWANGFSFYGAARKALDKVVAGTGLEWSIQNSELQIVNRNGVTKRSGYVLAKDSGLIGFPERTREAARSKKQDTPNKKQDEKFAFDRQARDGWNVKSLLLPMVNPCDKIKLESVTVTNWFRVEKIKHSGDSHSGDWQSELHLVDLNAPTKEQMKAQSKHRKKRKKKDEQK*	hallmark_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0006	shell	direct	high	962	0.999	GCA_005888215.1_00979
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	5469	5783	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	5470	5784	GCA_005888215_1_61_7	GCA_005888215_1_61_7	-	28128	.	7KH1_B4	Myoviridae, Phage, Baseplate complex, VIRUS	MITINLANKNDFITEVNLDDEVFFLHFSWNDTIGFWSLTIENTYNDELVSSIVILPNRPLIAPVRRDELPLGELIAVRDDNLQTIGRDDFINGKAVLIYIGVDE*	hhsuite_tools	hypothetical_protein	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0007	shell	direct	high	314	0.997	GCA_005888215.1_00980
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	5780	6361	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	5781	6362	GCA_005888215_1_61_8	GCA_005888215_1_61_8	-	28128	.	PFAM:PF06995.10	tail-fiber-protein	MSIVNLLFSALSGKRTTIGVLELDALLTENTSLSSQITEYPIEDGTVISDHITRESERLSLSGVITGAGTLFNVGLGKYKLIAAKETLRELHAKRELVTIVTGLDVYEDFAIESLEIERNSDDGERLNISAEFRKIQKVTLRKEEIPPEKAAPNAKGKAGQTKAKTGKAQTGKPTNTQAQKITKLGEWSGKKQ*	phrogs_hmm	hypothetical_protein	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0008	shell	direct	high	581	0.998	GCA_005888215.1_00981
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	6649	7245	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	6650	7246	GCA_005888215_1_61_9	GCA_005888215_1_61_9	+	28128	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MNTQIQFSTFNFKDLPVRVISDPKGEFWFCGTDVCAILGYTNSRKALQDHCKQGGVTKRYTPTKSADQEMTFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQLALPMVNDDFKQAMAKMVTYASQYANFQQAITSAQLEKQKRLVEFFFSSIPNGDSYLFVFNKNIQQDIQQASDLLHKLITQ*	common_virus_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0009	shell	direct	high	596	0.998	GCA_005888215.1_00983
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	7320	9737	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	7321	9738	GCA_005888215_1_61_10	GCA_005888215_1_61_10	-	28128	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MNAIRELVTLLRYKVDNSGLKAYVVQTQQAAKGIRSNLNNAVDGLRAKFSEAAVSAKGVGNNLNDAKNQMLSLRNLVAGYFAMIAGGNVIKIADDWAAVDSRVKLATKSAEEHKYALSQIFDLSQRSGQDYLASADLFSKVNRSAGDLGLSLDDTLNLTEIIGQTMTIGGGDQGAQQAALMQLGQALGSGALRGDELNSIIEQAPRLANAIADSFGVPIGQLKDLGKEGKLTSKELAQGLLKQADKIQKEFDQMPKTFGRGMTILKNKAGQLIDVAVNKVSKLGAAFYNAAEWVTENIRLVGFLAGTVIGGKLMFALAAAKKSLRQLLMMGARAVAPYLAMAAAAGVVALVLEDIYGWTQGDLSFTGALVGRYEVWADKFAALGKLADKLWINVRGLLKDLSRMAGVEINFDSWQAFATDVLEYIIAAVRNLINTVSGMVRIIRALINGDYAGAWSSAGDMIDGLSLKFLPLYSVGLMVLGGILSAVWALFSPFRAFFGLLKGGFRSVMFVAKPFIKVAKGIASPFIWAQKHFKLFSRVGSGAFSLLKRAAVKFTVYGLKAFKWLAIKGINGFFGILRAAVKFGMIFKSVVGTVVKGIFAIGRAMFMAVASNPILLAISAVIGLVILLVVYWDEVKAFAIAAWEAISKKAAEIWQSIITGASEMWDNITNKAAESWDNVKKDAVEKWNSVTTMFKNAWQKSIDTVVGWFNSLIPSWIRDLFSDGAKAEVKLSGEALTTPVSGHVSPQRLGYGGRPIFAPNQNMTQTNNFNIQGSANPSGVANAVSDKLSRGSSTSFGMGAIEYAG*	hallmark_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0010	shell	direct	high	2417	1.0	GCA_005888215.1_00984
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	9734	9886	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	9735	9887	GCA_005888215_1_61_11	GCA_005888215_1_61_11	-	28128	.	.	hypothetical protein	MIAWRPFLAGKVTLTELNTAGLTDMGELLKINRLLDAVDAMEAKQMEKNR*	.	hypothetical_protein	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0011	shell	direct	high	152	0.993	GCA_005888215.1_00985
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	9922	10404	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	9923	10405	GCA_005888215_1_61_12	GCA_005888215_1_61_12	-	28128	.	PFAM:PF10876.7	Tail-assembly-chaperone	MARSEIQIGESTFFVQKFSVMDQLRIFGDLQKTLIPSLAKVIGFSDEKPKDATSAQLAELAQKSAANFAQGLQDLSQQLSGAELVKLADMLIKPELVTVQRDDFNNGTDKKLSKTDFDLVFDDMSELIELVIFILQLNFSSFFTKFLARLGSVQELVKKS*	hallmark_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0012	shell	direct	high	482	0.998	GCA_005888215.1_00986
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	10404	10829	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	10405	10830	GCA_005888215_1_61_13	GCA_005888215_1_61_13	-	28128	.	PFAM:PF11681.7	virion-structural-protein	MALATYAPDEVSIVIGAVIVSGFADGTFIDIEEMSDGVSSVAGADGEVARATSADPRKKVTLTLLQTSDTNDVLSELYAADKVSKNATFPIAVKDLRGRSLFAASTAWVVKSAKLELGKEVGSREWTLETADGKLFVGGND*	phrogs_hmm	hypothetical_protein	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0013	shell	direct	high	425	0.998	GCA_005888215.1_00987
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	10875	11948	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	10876	11949	GCA_005888215_1_61_14	GCA_005888215_1_61_14	-	28128	.	PDB:3J9Q_C	tail-sheath	MAKIDRLVNVAIDLNTTTIAGKSFSDLLILGEHTLNNSARLLVVTDPNELLDLGLKSNNPLYIAVATAFAQPSHVAQVFIGRKAQDESVTDALAAVARENNSWYGLALVSREDSDVMLAAAWAETNGKLFVTASADEKLPQSAEKTDIASKLEAKQYYRSAVMYSHKATEEYPEIALMSYSFTFYPGSETWNLKKLAGVSYSPLMEGEYLACAKKNATTFEKFNDSFAVTQGGKVAAGEWIDIIRFRDWLVQEVQINVTSVLINAYGKVPYTDKGIQLIGAAVRQALDLGVARGGIAPTELDDNNKEIPSYVISLPLAAKVSNNNKGKRLLQDVKFSARLAGAIHLTEIKGNLAYSL*	hallmark_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0014	shell	direct	high	1073	0.999	GCA_005888215.1_00988
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	11935	12444	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	11936	12445	GCA_005888215_1_61_15	GCA_005888215_1_61_15	-	28128	.	PDB:5A21_G	tail-completion-protein	MLERLYDLLGDLSDRPFIRAYENGREPEKPFFTYELKFERTPEHFHYSAVNDEGNQTVKTHIDAVLELNYFGGNSLQALRDVCMRLSMQSCRERWLNDGVALIRIGRITHLAFLNEQREYEDRAMVEIEIRYAASVQDIVGIIEQVEVTANIGRASEKNLIGVNKNGEN*	hallmark_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0015	shell	direct	high	509	0.998	GCA_005888215.1_00989
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	12446	12805	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	12447	12806	GCA_005888215_1_61_16	GCA_005888215_1_61_16	-	28128	.	PFAM:PF10665.8	Minor-capsid-protein	MQVFSSQSSFRKPYKILVRSDGEYVKGKWVKGGEIEQMLMASIQPLNGAEMDRLVVSMQGRRVSSAVKIYTDQKLTVAGENAHNGTVVLFDGERYEVISRASYHSGVLSHHRYVAIRVK*	hallmark_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0016	shell	direct	high	359	0.997	GCA_005888215.1_00990
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	12805	13263	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	12806	13264	GCA_005888215_1_61_17	GCA_005888215_1_61_17	-	28128	.	PFAM:PF05069.12	Virion-morphogenesis-family	MSSVVKVKINNKGLEKELELINKIGKARVKVGVQADAGVHSESGESLVDIGIWNEYGTAHIPSRPFIRQTFEDNQQAVAQYLGRVVENVAKGADLVQELSKLGQWYQDKQKKTLKSYPWTPNAPSTRKRKKSSKPLVDTSQLVNSIRYKVEI*	hallmark_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0017	shell	direct	high	458	0.998	GCA_005888215.1_00991
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	13256	13606	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	13257	13607	GCA_005888215_1_61_18	GCA_005888215_1_61_18	-	28128	.	PFAM:PF13262.5	head-to-tail-adaptor	MSAYSLLNLFYPLSQQMPEDIVNKALSVADNKRPDCLSDEKQDEAVAWYAAYLLAQSIESGVNAAGLRREREGDLEREYFSSSDKGGNAERFLAKYNELNNICVRLGAITVGSHCV*	hallmark_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0018	shell	direct	high	350	0.997	GCA_005888215.1_00992
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	13610	13798	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	13611	13799	GCA_005888215_1_61_19	GCA_005888215_1_61_19	-	28128	.	.	hypothetical protein	MIVRNIEARLIRVGGEFIAPNQEVEIADDAVGLDRLIERGVLIDVTPKAEEPKKDGKSKKQE*	.	hypothetical_protein	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0019	shell	direct	high	188	0.995	GCA_005888215.1_00993
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	13801	14748	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	13802	14749	GCA_005888215_1_61_20	GCA_005888215_1_61_20	-	28128	.	PDB:8HDT_C	Major-Capsid-Protein	MTDIRQDAFELNAINTCLNAVGVFNQDAGLFTQRQLEFVRNKIYEEKLPGMNGLSLVPVSSEAPEWAETVTERIYDMVGMAKVIANYADDLPRADVAMTERAVKVKNIGAAYGYNLQELKAAAANQTDLPSSKARAARRAVEVKMNEIALLGDKEFGLNGFINHPNLGETSVTGSWKTATADAVLADLDNLHDTVVLQSKGVHQPTHLLLSLTDYQTLSSKYMNTADKVDVLTFFKRKHPNLTIQGLWELEKAGTGNKNLAICYEKSLDNLTLETPQDFTQLPAQERNLELVVNCVARVGGVFLRYPLSATKAEI*	hallmark_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0020	shell	direct	high	947	0.999	GCA_005888215.1_00994
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	14810	15229	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	14811	15230	GCA_005888215_1_61_21	GCA_005888215_1_61_21	-	28128	.	PFAM:PF11133.7	virion-structural-protein	MSMYDQLQQKAFAGMKGDSRYDLVETFAAENEIPFGVVITQGTSATQAKLGGTKPIGIALHSHAVVGGYAKFDAVSVLRKGVAWCVVKDGETITAGSAVSFDPASGKVAKTGTALPNATFKTAVVDCGKYGKLALVELA*	phrogs_hmm	hypothetical_protein	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0021	shell	direct	high	419	0.998	GCA_005888215.1_00995
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	15242	16315	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	15243	16316	GCA_005888215_1_61_22	GCA_005888215_1_61_22	-	28128	.	PFAM:PF09979.8	head-maturation-protease	MVMRYDRRGIQARRDDNGFIYDTPILTRSGVFVYELPNGKTRREYRPPDEVFKADSLRAYKGLPITEDHHGLVTKNNAHLVVGSILTEGKQDGQNLTADIVIHNTKAVDFGKKELSVGYKVDIDETSGTTEDGEPYDVIQRNIRPNHLAIVTVGRAGNAALNLDAADAVEFNEDGENPMSNTQTTLSDIRLDSGITYQAAPEVIVELNKLKQDAKDAVTAKDKEAARADAAEAKVKELETQVEQIKQDAVSQAKVRVELENVAKVHKVEVKADSTDRALREAVIKAIRQDNADLSQKSDGYIEAAFDIAVSDAKQRADAAGVQRQQLTPSATNQPTFTQDSQTKLTGRAAMIASRNQ*	phrogs_hmm	nonviral_gene	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0022	shell	direct	high	1073	0.999	GCA_005888215.1_00996
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	16441	17658	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	16442	17659	GCA_005888215_1_61_23	GCA_005888215_1_61_23	-	28128	.	PFAM:PF04233.13	Minor-capsid-component	MFPHAIEREYVGYLRGVARNINTMVNQKFVEIRPHFKANIRQDSFSDTLERWLIELLQAVLIFVDEKEITQFVRGYIHQTANFNGKQFHKVLKSVYSVDVFTTEPWLDDALKIAEWENIRLIKSLPTQTLEKLRSRFTQAVRGGWRWESVVDDVKSILNTNEKRATLIARDQIGKLNSHLTKLRQQNIGVKSYIWRGMLDERERAHHVDREGKQFDWDNPPDDGHPGEPILCRCYAEAVFPEFEDLGRDDAEPIDPISTIKTGKMNLDELFDNSLSGGGNKSFSNFGSVGPALVTLAKESIGLDISGWQHSIDESSIRHILKQHGNEKAENKRGQRAVTKADILMLPQIVSSFDSIDYTGTSDAGSETFLLRKEIGDEIFCVQEVRKRHKKIAVKTMWIRKKKKP*	hallmark_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0023	shell	direct	high	1217	0.999	GCA_005888215.1_00997
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	17639	18955	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	17640	18956	GCA_005888215_1_61_24	GCA_005888215_1_61_24	-	28128	.	PFAM:PF06381.11	Portal	MEFNQDGYAEALGINHFARNSANSTALFDLTLYELGGLAARVVDMPADAAISRSIEIQGDQDDAISNEIERLKILPALADMVRWSRFFGGAVMVLLTDDGARLSEPLEPSRITRIDEVRVFDLSQISPTANRYSDPTKPNYGRYSSYRLNIGTIAGSLDSQVEIHESRLLFMGGDSLPERLKNGLHWIGRSAVRSVYPKIRDYQKSLMWASLILERKQQAVHKMKGLALAIDNGLEPVIRERINLVERGRSLLNGVAVDSEDDYNILNADLGGIVDVLDEFKVAISADVNIPVAILFGQSAKGMNATGQSDFESYYDLVESIQQHKIKPVLEKLIELLMFQKHIKPFENWKIKFPSLNTPTDKEIADVRKTNADAAKIELDRLINLVDSGALSTDELRTQIAGEFGIQADKLPQVDDDDVEKYQEEQKAKGVVVSSRN*	hallmark_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0024	shell	direct	high	1316	0.999	GCA_005888215.1_00998
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	18957	20306	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	18958	20307	GCA_005888215_1_61_25	GCA_005888215_1_61_25	-	28128	.	PDB:4IDH_A	Large-Terminase	MRQTLIKPLKPMIKPCRYKILYGGRGSGKSWGVAQLLVEIAVRTKVRVFCGRELQNSMSDSVIKLIADTIEDLGYLEDFEVQRNAIYCLKTGSEFMFYGIKNNPNKIKSLEGIDLVWIEEAENVSNESWDILIPTIRKERSEIWVTFNPKNILDPTYQRFVIAPPKNSFVRKINYDENPYFPETLRLEMEECKERDYELYRHIWLGEPVADSDKVIIKPVWIECAVDAHKKLGFLPAGRKIVGFDVADDGVDSNANAFVHGSVVLRVDEWRGEDVIGSADRTRLNALEFGANEIVYDSIGVGAGVKAHYHRLDDKSIRINGFNAGGAVFEPDAEYVYGKTNRDMFANIKAQAWWCLRDRFYKTYRAITYEEQYPVDEMISLSSDIRDLEYLKAELARPYVDYDGNGRVKVESKKDMKKRGIPSPNKADALIMCFAPKEDVLSRFIGLGS*	hallmark_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0025	shell	direct	high	1349	0.999	GCA_005888215.1_00999
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	20287	20655	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	20288	20656	GCA_005888215_1_61_26	GCA_005888215_1_61_26	-	28128	.	PFAM:PF07141.10	Small-Terminase	MSKKKTKPKIEIDLSMVESLAAQGLTNQQIADSLGISERTLQNRKKDNAEFAEAIKKGKAKGIAVVTNALMKKIKSGNVTAMIFFLKTQGGWKENNQLEIEMKKEKKLPTLAELFGDETDPD*	hallmark_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0026	shell	direct	high	368	0.997	GCA_005888215.1_01000
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	20713	20934	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	20714	20935	GCA_005888215_1_61_27	GCA_005888215_1_61_27	+	28128	.	.	hypothetical protein	MMKKIDVLKDLMAKNEWKKAISLASKFPRLGNAKDAIKSAQMAYTNPNFVRQIKKDPDKLIYQGIQALIAKYG*	.	hypothetical_protein	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0027	shell	direct	high	221	0.995	GCA_005888215.1_01001
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	20931	22289	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	20932	22290	GCA_005888215_1_61_28	GCA_005888215_1_61_28	-	28128	.	PDB:1Z6A_A	Helicase-of-the-snf2-family	MMNKDLNIEYISTDVLKPYVNNSRTHSDEQIDQICESIEEFGFTNPILIDENNGIIAGHGRLLAAIKLNLYTVPTIRLTGLSDIQKKAYVIADNSLALNAGWNFELLSLELNELKDLGFDIDLLGFDDDFLKSLDGDLLADISGDSNSKEKLDLKQAFLAPPFSILNSREGWWQDRKRKWKALGIDSGSGRDSGMQRGMNSMARYNSKEDTSMSESDDSIFDPVLCEILYSWFSPKGCQILDPFAGGSVRGIVASKLNRNYIGVDLRAEQIEANLKQRNLVCSNDELQPIWICGDSINIDKLANGVSADLVFSCPPYADLEVYSNNPNDLSNMDYDNFKKAYFEIIKKSCDMLKDNRFACFVVGEVRDKKGNYYNFVGDTIQAFLEAGLSYYNEMILVNVCGTMPMRAATPFKGSRKIGKVHQNVLVFVKGNPKIAAEYCGDVDVYIPNEDN*	rep_hall_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0028	shell	direct	high	1358	0.999	GCA_005888215.1_01002
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	22503	22892	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	22504	22893	GCA_005888215_1_61_29	GCA_005888215_1_61_29	-	28128	.	PFAM:PF10828.7	Rz-like-spanin	MTWWLFVIKKLGLNVLSHGCKHFNKVVAVFAGVFILALLYMQHTNKLNIERQSAVIDSLHEKVIKRDKIIDELHEDVDEQRKIAEKRLAQEQLIREQSYAQIQSIKKILESNQCSRATLPSGVAAELRK*	phrogs_hmm	hypothetical_protein	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0029	shell	direct	high	389	0.997	GCA_005888215.1_01003
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	22889	23293	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	22890	23294	GCA_005888215_1_61_30	GCA_005888215_1_61_30	-	28128	.	PDB:2MXZ_A	L-alanyl-D-glutamate-peptidase-endolysin	MSKFKLSAASEEKLVGVHADLVKVVHRAIELSVVDFKVIEGKRTLERQKELFAKKATKTMNSRHLTGHAVDLVPLPVNWNDREPFKTVASAMFQAAKQLGVAIRWGGDWNMNERSDDERFYDGPHFELLRSVYP*	common_virus_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0030	shell	direct	high	404	0.998	GCA_005888215.1_01004
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	23280	23606	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	23281	23607	GCA_005888215_1_61_31	GCA_005888215_1_61_31	-	28128	.	PFAM:PF05106.11	holin	MPTKDPTNWESFLRWLPLVFIGLFAGVAKYASDIQAGKLHFSVGLFLCQVLVSMFAGWIGGLICLSSGLDSDLVYVGSGLSGYGGGAVLNAIWRGFFASKLGIKDEQV*	phrogs_hmm	hypothetical_protein	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0031	shell	direct	high	326	0.997	GCA_005888215.1_01005
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	23617	23778	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	23618	23779	GCA_005888215_1_61_32	GCA_005888215_1_61_32	-	28128	.	.	hypothetical protein	MIKYTPKHQVKVGGKMSEKDAGIVGNKLANSAIIASIGFAVGFILIGLGYFLK*	.	hypothetical_protein	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0032	shell	direct	high	161	0.994	GCA_005888215.1_01006
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	24029	24997	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	24030	24998	GCA_005888215_1_61_33	GCA_005888215_1_61_33	-	28128	.	PDB:2FJR_A	Repressor-protein-CI	MTTLGERLKFLLIERNVTQAELAEMVGTTQGAISNIVKGETQKPRNILEIANALGVDPNWLKYGSTKMTTLSERLKALLVEKGINQTEFANMIGIAQPSMQKILAGETRNPRKIVEIAKELGTTPDYLLYGDMTVSHSTLENSQINNNQGQTVNNFFDSGSDELREMLQKQQVSLKTKPTEEWVFALDVNRLAETDIINAHFPRPFEALHLSQDGMMDLLKLRSTANVAMITMFNESMSPVINKKDLMFVDTTCKQYAGEGIYLFVMNNELYVRRLYQTPSGVLNVVAENERVGSSFEIDDLSRLNVLGRCVRKFSIIAEDL*	common_virus_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0033	shell	direct	high	968	0.999	GCA_005888215.1_01007
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	25131	25337	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	25132	25338	GCA_005888215_1_61_34	GCA_005888215_1_61_34	+	28128	.	pfam15943	Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	MINKTIKIAIDECGGQAKLAKLCSVAQPTVFAWLHRGGISGKYIPLIAKASNGKVTETDILRSLTKSQ*	mmseqs_cdd	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0034	shell	direct	high	206	0.995	GCA_005888215.1_01008
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	25381	25833	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	25382	25834	GCA_005888215_1_61_35	GCA_005888215_1_61_35	+	28128	.	pfam06892	Phage regulatory protein CII (CP76). This family consists of several phage regulatory protein CII (CP76) sequences which are thought to be DNA binding proteins which are involved in the establishment of lysogeny.	MNSKDIQRTLHRDCKNASGGITTLALTLGKSPNILGNKLNVECENNHLSFIEALDLIEITNSTRTVAAIADKIDHLIVPMPKCASCCADVVQGFLDITTNAGKIGEQIKSAVHPNSDLGRELSNKEKQTISASIDALIESALCLKWELEQ*	mmseqs_cdd	nonviral_gene	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0035	shell	direct	high	452	0.998	GCA_005888215.1_01009
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	25879	26112	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	25880	26113	GCA_005888215_1_61_36	GCA_005888215_1_61_36	+	28128	.	pfam14090	Helix-turn-helix domain. This helix-turn-helix domain is often found in phage proteins and is likely to be DNA-binding.	MENTNPNEKISQSQCDRILRYLQSGKRLTSLEALDKFGCLRLSARILDLKNRGHQISDEFVHDARTGKVYKAYFMAV*	mmseqs_cdd	nonviral_gene	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0036	shell	direct	high	233	0.996	GCA_005888215.1_01010
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	26066	26896	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	26067	26897	GCA_005888215_1_61_37	GCA_005888215_1_61_37	+	28128	.	PFAM:PF06970.10	replication-initiation-O-like	MHAQAKYIKRILWRYEMSVELMTKAFKSKTGNPLTKLVLVKLADNANDDGVCYPSYKRIAIQCEVSRPTAISHVKKLEAMKYLSIRERKTENGNATNVYILHPENWEEVEPFTSKPALPPLVNELNQPSKPALPPLVNELNPEPSIEPSDNHHIKKTTQKSEAEMLLEQFGITGQLAKDFIAHRKAKKGVINQTQLNRLQKQADKAGISICEAVEICIERNWQGFNASWDWRDEKLRPNSPHLGQSHPNKPKFDDTQTGWSAGMNFTVDGTQWQIP*	phrogs_hmm	hypothetical_protein	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0037	shell	direct	moderate	767	0.923	GCA_005888215.1_01011
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	26881	27522	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	26882	27523	GCA_005888215_1_61_38	GCA_005888215_1_61_38	+	28128	.	PFAM:PF06992.10	Replication-protein-P	MANSITENQINTLPPERAQRAEETINWLFQELKSIFLGWRAAFETEADYLSAKKTWLRVLVREKITRPQLENGLYKAENSLDKFLPSVGLFVFWCKAYDYHALGLPNEAELYQRYNTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKTIPKLLTEAAEKVRSNFPFEDIPKMIPTKPRFYDKAKADKARDSLMAMMKGKGALQ*	rep_hall_hmm	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0038	shell	direct	high	641	0.998	GCA_005888215.1_01012
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	27519	27743	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	27520	27744	GCA_005888215_1_61_39	GCA_005888215_1_61_39	+	28128	.	.	hypothetical protein	MTSYKCPKCGAELEDFYTPDYFISSSEWDDDRFRCNGHLIEPIPFPQVSKYSAVNRTKSCGYFGLEDLGVEYKE*	.	hypothetical_protein	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0039	persistent	direct	high	224	0.996	GCA_005888215.1_01013
GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote	cenote	CDS	27780	28127	GCA_005888215.1	LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215.1_LNKO01000062.1	GCA_005888215.1|LNKO01000062.1	GCA_005888215_1_61	GCA_005888215_1_61@C0	27781	28128	GCA_005888215_1_61_40	GCA_005888215_1_61_40	+	28128	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPIDDKKPLVVKIQPITRSLEQNSKLHALLSDISKQCEFNGKKRDIDTWKMIMVSAHKIATGGQAEMVIGLEGEVINLRESTAQMSVKRLAS	mmseqs_cdd	common_virus	C0	28129.0	0	28129	GCA_005888215.1|LNKO01000062.1@region_1_28129@tool_cenote_CDS_0040	.	unmatched_CDS	none	0	0	.
GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote	cenote	CDS	1	875	GCA_005888215.1	LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215.1_LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215_1_66	GCA_005888215_1_66	1	876	GCA_005888215_1_66_1	GCA_005888215_1_66_1	+	7765	.	.	hypothetical protein	KKVKTEFNSDFELCGFVNSEKKDRFYNDFFKVADYNIDLQIDDEKDDVPFGYVYGLSDCDEQAKGKLSMIQFDGFIQIPSRTINETAQKIILDKFSSYRFLNNEFGDLNHNFGLNFDFPNNYLDVPTQYTYVLIEQLKEIIDFHQDEQLKKQSNDSIDSTELQAEKAKNTQLQAENESLKAELKAQQDRMAELEQKLQQSAVDSEPVLGNGKAYDVRERETHLLMIGALSNLLAGYKQSYQKGSNRINQSAISRGIEHEIIKLLQPETKTRTLDTIRPRIREALNLITKAE*	.	hypothetical_protein	NaN	.	0	7765	GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote_CDS_0001	shell	direct	moderate	671	0.767	GCA_005888215.1_01069
GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote	cenote	CDS	1082	1330	GCA_005888215.1	LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215.1_LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215_1_66	GCA_005888215_1_66	1083	1331	GCA_005888215_1_66_2	GCA_005888215_1_66_2	+	7765	.	PFAM:PF10013.8	excisionase-and-transcriptional-regulator	MPDKTTTPSNDTEQAPRFLKRKSTAERLGVSLTTLDDWRNPKAKRYRPDFPKAIKVANGATCFLESEINAYVLKLANECRVS*	phrogs_hmm	hypothetical_protein	NaN	.	0	7765	GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote_CDS_0002	shell	direct	high	248	0.996	GCA_005888215.1_01070
GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote	cenote	CDS	1338	1601	GCA_005888215.1	LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215.1_LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215_1_66	GCA_005888215_1_66	1339	1602	GCA_005888215_1_66_3	GCA_005888215_1_66_3	+	7765	.	pfam14090	Helix-turn-helix domain. This helix-turn-helix domain is often found in phage proteins and is likely to be DNA-binding.	MMAINTTSTHEQQKYILQRLSVRPHSTNELRELGIYFPPARIKELRDKGFHIDTFYRKETDSSGLAHRVGVYVLHQNEVSQNYQYND*	mmseqs_cdd	nonviral_gene	NaN	.	0	7765	GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote_CDS_0003	shell	direct	moderate	260	0.985	GCA_005888215.1_01071
GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote	cenote	CDS	1617	1910	GCA_005888215.1	LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215.1_LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215_1_66	GCA_005888215_1_66	1618	1911	GCA_005888215_1_66_4	GCA_005888215_1_66_4	+	7765	.	.	hypothetical protein	MTNTNQQTHTEKCKHATLWTISRTLDRLRYITDTAINGTILDYPDKDGNRPPATPKQIYKLILEEVDCAIEQVNDLKRQIEALAIHQEYKADASYLP*	.	hypothetical_protein	NaN	.	0	7765	GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote_CDS_0004	shell	direct	high	293	0.997	GCA_005888215.1_01072
GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote	cenote	CDS	1891	2358	GCA_005888215.1	LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215.1_LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215_1_66	GCA_005888215_1_66	1892	2359	GCA_005888215_1_66_5	GCA_005888215_1_66_5	+	7765	.	PFAM:PF03592.15	Terminase-small-subunit	MRVIYRELLNKAKEEEMMNELTVKQSDFCLFYIETGNASEAYRRAYDAENMKPETVNRRAFDLMENSKIKARIEALRAEHRKEHNITVSDIMNKLEDIYSEAMKKGNLSSAVSAVMGQAKVLGFDKQTINLEGDIKPLPTVINVTFSDEPQEENL*	hallmark_hmm	common_virus	NaN	.	0	7765	GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote_CDS_0005	shell	direct	moderate	419	0.895	GCA_005888215.1_01073
GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote	cenote	CDS	2358	2654	GCA_005888215.1	LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215.1_LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215_1_66	GCA_005888215_1_66	2359	2655	GCA_005888215_1_66_6	GCA_005888215_1_66_6	+	7765	.	.	hypothetical protein	MKCTIAKHNSLLLQQAIQHYRKSHQIFTFMSLYDDNEPYPIDDVIQVLENRLNVIKRQIDSFTKMTAGLRKNERLETSFYTTKKHLEMMRKRKQEIGD*	.	hypothetical_protein	NaN	.	0	7765	GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote_CDS_0006	shell	ambiguous	low	2	0.007	GCA_005888215.1_01073
GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote	cenote	CDS	2915	3877	GCA_005888215.1	LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215.1_LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215_1_66	GCA_005888215_1_66	2916	3878	GCA_005888215_1_66_7	GCA_005888215_1_66_7	+	7765	.	PF10554.9	Ash protein family	MQPIKLGINMNLIHKHYSNDENFYNSNPLQSAVNFGIISPQSQKTIAEPGNSTYLQLAQSTPKACFFMRNIRTPQNKLRILFQHLSTIYSSMVACSGKGSPFAVFQLSQFSRPLHVTAKAWKLYAVTLKCLQLELRKMYQFIFALSRAPQIKIRLLADNEQQARSRFTDGDTLLFVGRINQNPLKNNRTFSTNGKNHSLPKCEDAGSIESTETKDGNRNRHLSGIFLPKIHSLHAPKKLGALSYIEFAVRATHGNKALSTNNVGYSLVAVEPLSHPIQGDNSLLTKPKRNPTMKIYPKNNRTLATFPTLSVSATQGGANV*	hhsuite_tools	hypothetical_protein	NaN	.	0	7765	GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote_CDS_0007	shell	direct	high	962	0.999	GCA_005888215.1_01074
GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote	cenote	CDS	3870	4241	GCA_005888215.1	LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215.1_LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215_1_66	GCA_005888215_1_66	3871	4242	GCA_005888215_1_66_8	GCA_005888215_1_66_8	+	7765	.	.	hypothetical protein	MFNQSILSALQEMADFNDINNYKQIPVPMSKEKLKDLRSESKNLCESIEYGLMHLGDLMQTLGNLADTEQDFTREAMSNDNVKHIGGLIKANAYLLNALRETASLSEYYLAGGLDGEIERNDD*	.	hypothetical_protein	NaN	.	0	7765	GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote_CDS_0008	persistent	direct	high	371	0.997	GCA_005888215.1_01077
GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote	cenote	CDS	4213	4434	GCA_005888215.1	LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215.1_LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215_1_66	GCA_005888215_1_66	4214	4435	GCA_005888215_1_66_9	GCA_005888215_1_66_9	+	7765	.	.	hypothetical protein	MGRLKEMMIKPNLPYQLIFVYDNGDQFIAGEYGTLREALQAKIKCKHEIGQTDICGRVLEVITILKGEENETN*	.	hypothetical_protein	NaN	.	0	7765	GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote_CDS_0009	persistent	direct	moderate	203	0.914	GCA_005888215.1_01078
GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote	cenote	CDS	4439	5104	GCA_005888215.1	LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215.1_LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215_1_66	GCA_005888215_1_66	4440	5105	GCA_005888215_1_66_10	GCA_005888215_1_66_10	+	7765	.	.	hypothetical protein	MAQLEQWKKNNQQRKINQFVNEMNRTKNLASDSSVSANGVHPNELKNELVKDCESKLRNAEAICESGKTIKSAVKKLGNLKIEEISKTQQEAQGEAKSKYQGKLWANPLAFQFAQLTRQFKLILDSNRKCLDVYPDDFHHKLKMRDEMMDLIDRLKAGGKLFNALAKSQGVTCCRDNQATLKDFNQANGYLIHKFGEVVAQIERLNIERIEGEKLQGVSYE*	.	hypothetical_protein	NaN	.	0	7765	GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote_CDS_0010	persistent	direct	high	666	1.0	GCA_005888215.1_01079
GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote	cenote	CDS	5097	5489	GCA_005888215.1	LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215.1_LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215_1_66	GCA_005888215_1_66	5098	5490	GCA_005888215_1_66_11	GCA_005888215_1_66_11	+	7765	.	.	hypothetical protein	MSKTAFVLTAGVHVFEGSFMPIVIATGESKEAILSFHRTYTLQGKLTNIKEINLNHYTLEISLGNAQAPIIHAKGKRSRADLEEAIEHFQILYPTAQIRVIQFKDAFLFKQCAGIRLGIDAAQGGKKWLN*	.	hypothetical_protein	NaN	.	0	7765	GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote_CDS_0011	persistent	direct	high	392	0.997	GCA_005888215.1_01080
GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote	cenote	CDS	5477	7669	GCA_005888215.1	LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215.1_LNKO01000068.1	GCA_005888215.1|LNKO01000068.1	GCA_005888215_1_66	GCA_005888215_1_66	5478	7670	GCA_005888215_1_66_12	GCA_005888215_1_66_12	+	7765	.	COG5519	Uncharcterized protein, DUF927 family [Function unknown]. 	MAKLINAPYAKQQDPTGQSLVTICIGTQAQTIAKHFNEMGKSAVEIELENTLGEQGKSFPCVVVDSEILEHIERYRIAPKNTQSIRLIQANNGMALSNETLERVYLNIAQSTSAESVIYCNEAGEVLEEVSRYIQRLRNGDTYHGEIKPICESIRDNHQPYTEKRKENGIEGLFRVVPKLDKDTGEMMDKCEWLADCVDVVGIGLSDSDYFSMLSFQAQGKSEPILIALPWADIGERAGWQLLKQNGLRITNSQRLKPHLADFLQDTQNKPIYQIVNETGWQSDFNAYVLPSGEVLGKPERPIYFNSKSTTSAGYQAKGTLSEWQREIGQYLRGNHSMMLGVACSLSAPLIGLIGAESFGVHLFGKSSAGKTTIANIASSIYGEPDLIRLSWNGTSLGLINEAATRNDGFIPLDEIGQGASKKHVEQTAYTLFNGVGKIQGAKDGGNRELNRWRILVFSTGEQDLELYLKQDNIKTNAGQLVRLLNIPITPSSTFYHFGNGKAHADHLNAMTRRYYGTMGRAWIEWLLENKSAVTAEYECLSEQWQAMLPNDASPQVKRVAGRFAILETALQLAAHLTGWETSENKTALLHGFNEWINEYGLHSREEKQIIEQVNGWLLRNGARFLDFPFNPNQKEPNDTAGYRQLADSKEQQEGDKYWVFPQVYIQDVIKGFNEKQANEILLGAGMLIQGKERGRKYLNRLPKTISGGKTIRCYVLEILNEDEESEDIE*	mmseqs_cdd	nonviral_gene	NaN	.	0	7765	GCA_005888215.1|LNKO01000068.1@region_1_7765@tool_cenote_CDS_0012	persistent	direct	high	2192	1.0	GCA_005888215.1_01081
GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote	cenote	CDS	60	239	GCA_005888215.1	LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215.1_LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215_1_86	GCA_005888215_1_86@C0	61	240	GCA_005888215_1_86_1	GCA_005888215_1_86_1	+	10924	.	COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family [General function prediction only]. 	MNSAKIIKQIEDDGWYLVNVVGSHHQFKHPTKKGRVTVPHPKKDLQIKTVKSILKQAGI*	mmseqs_cdd	nonviral_gene	C0	10925.0	0	10925	GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote_CDS_0001	shell	direct	high	179	0.994	GCA_005888215.1_01327
GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote	cenote	CDS	303	710	GCA_005888215.1	LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215.1_LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215_1_86	GCA_005888215_1_86@C0	304	711	GCA_005888215_1_86_2	GCA_005888215_1_86_2	+	10924	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MLYPIGIEMGDENHTYGVVVPDVPGCFSAGDTLEEAFINAKEAITFHIEGLLEDGEEIPQPTSLQEHVKNPEYEGFTFSFVDVDLTHLMGKAEKINVTLPSLLIKRIDSFVATHPEYKNRSNFLAQVVTNKLLAA*	mmseqs_cdd	nonviral_gene	C0	10925.0	0	10925	GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote_CDS_0002	shell	direct	high	407	0.998	GCA_005888215.1_01328
GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote	cenote	CDS	1083	2117	GCA_005888215.1	LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215.1_LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215_1_86	GCA_005888215_1_86@C0	1084	2118	GCA_005888215_1_86_3	GCA_005888215_1_86_3	-	10924	.	CDD:PHA02536	portal-vertex-protein	MKTNVTDNKKGIVIAPINDRTFSLNEISASPALDYVGIGFDENYNCYLPPVNRHALAKLPHQNAQHGGILHSRANMVSALYEGGKALSRMDMRALCLNLIQFGDVGLLKVRNGFGQVVRLVPLSSLYLRVRKDGGYSYLMKKSLYDTAQEIYRYDAKDIIFIKLYDPMQQVYGSPDYVGGIQSALLNSDATVFRRRYFSNGGHMGFILYSTDPDLTEEMEEEIAKKISESKGVGNFRSMFVNIAGGHPDGLKVIPIGDTGTKDEFANIKNISAQDVLTAHRFPAGLSGIIPTNTGGLGDPLKYREVYHYDEVMPLQEIIAETINQDPEIKNLLKIKFREQNFAK*	hallmark_hmm	common_virus	C0	10925.0	0	10925	GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote_CDS_0003	shell	direct	high	1034	0.999	GCA_005888215.1_01329
GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote	cenote	CDS	2107	2244	GCA_005888215.1	LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215.1_LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215_1_86	GCA_005888215_1_86@C0	2108	2245	GCA_005888215_1_86_4	GCA_005888215_1_86_4	-	10924	.	PHA02535	terminase ATPase subunit; Provisional	MTFTAERTVKTQHADVFFAICNAINKKSLSDKPRKRRGWSVLNEN*	mmseqs_cdd	common_virus	C0	10925.0	0	10925	GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote_CDS_0004	shell	direct	high	137	0.993	GCA_005888215.1_01330
GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote	cenote	CDS	2241	3911	GCA_005888215.1	LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215.1_LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215_1_86	GCA_005888215_1_86@C0	2242	3912	GCA_005888215_1_86_5	GCA_005888215_1_86_5	-	10924	.	CDD:PHA02535	terminase-ATPase-subunit	MTESKLRKRKTKRYDDEVIYAAKFLYLKKYTPKEIAEELGLNSTRPIYYWAEKYNWRNLISESGIEELIALRIITLTERENKSDQEIKELEALIDKDIQYKKQRVATVAKVTAKSAVNSADVSGNERAFADSGDGDERKKKKRVKNDISHVTPEMCQPFIDSLFDYQKHIRANKHHDVRNILKSRQIGATYYFSFEALEDAIFSGDNQIFLSASKRQAEIFKNYIVKMAREYFGVELTGNPIILSNGAELHFLSTNKNTSQGNSGHVYGDEYAWIRDFQRFNDVASAMATHEKWRETYFSTPSSKFHESYSFWSGDNWRDGDPKRKNVSFPTFAELRDGGRLCPDGQWRYVVTIEDALKGGAGTLFNIEKLKQRYSKYAFNQLYMCVWIDDADSIFTVHQLLKCGVDISKWKDFNPKADRPFGDREVWGGFDPAHSGDGASFVIIAPPALPSEKYRVLARYQWQGLSYVYQANQIRALYEKYNMTYIGIDATGVGYGVYELVKEFARRAATAIIYNPESKTGMVLKVHDLVEHGQIEWSEKELDILSTNQQNLAIR*	hallmark_hmm	common_virus	C0	10925.0	0	10925	GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote_CDS_0005	shell	direct	high	1670	0.999	GCA_005888215.1_01331
GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote	cenote	CDS	4115	5002	GCA_005888215.1	LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215.1_LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215_1_86	GCA_005888215_1_86@C0	4116	5003	GCA_005888215_1_86_6	GCA_005888215_1_86_6	+	10924	.	CDD:PHA02529	capsid-scaffolding-protein	MNKSKLKTDFICIATSGYTVDGRQITAQELHEMAETYDPEHYTANLWPEHRRYFSCGEVLEVKAEEQENGEVKLFAKIAPNQQLIDFNRDGQKLFTSVEIAGNFRNSGKAYLSGLGVTDSPASVGTTKLDFFNHQDKVQCSEFINIDFTEQKNDEEKMTRSFFNAIKQFFSSSEQQEEQSTPHNNNNKEDDAMNDKQFEQLIEAVNGLGAKIDNHFSAKVETKEPKNKPEEKKDEQPQSVTAEQFNQLLTTVQALDKKFNELSQEQTTVPSGVPTVESENVYSLNGYNIDLSKGF*	hallmark_hmm	common_virus	C0	10925.0	0	10925	GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote_CDS_0006	shell	direct	high	887	0.999	GCA_005888215.1_01332
GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote	cenote	CDS	5006	6016	GCA_005888215.1	LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215.1_LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215_1_86	GCA_005888215_1_86@C0	5007	6017	GCA_005888215_1_86_7	GCA_005888215_1_86_7	+	10924	.	CDD:TIGR01551	phage-major-capsid-protein,-P2-family	MNKQAYYALVAALAKHFNQPMDSILRGESFSLKAPEAALLGENIQQRSDFLKQINMVQVAHIKGQKLFGATEKGITGRKQTGRNLANLDHTQNGFELSETDSGIIVPWALFDSFAIFKDRLVELYSEYFQNQVALDILQIGWNGQSVANNTTKTDLSDVNKGWLKLLQEQRAANFMTESTKSSGKITIFGDNADYANLDDLAFDLKQGLDFRHQNRNDLVFLVGADLVSKETKLIQKKHGLTPTEKAALGSHNLMGSFGGMNAITPPNFPARAAAVTTLKNLSVYTEAESVRRSLRNDEDKKGVVTSYYRQEGYVVEDLGLMTAIDHTKVKLNGEA*	hallmark_hmm	common_virus	C0	10925.0	0	10925	GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote_CDS_0007	shell	direct	high	1010	0.999	GCA_005888215.1_01333
GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote	cenote	CDS	6057	6875	GCA_005888215.1	LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215.1_LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215_1_86	GCA_005888215_1_86@C0	6058	6876	GCA_005888215_1_86_8	GCA_005888215_1_86_8	+	10924	.	CDD:PHA02537	terminase-endonuclease-subunit	MQALAEINQVSESNTQQSAVATHGNDYAVLEIALQNDVNAVRAFQTRAEKLDYKRNRFLPKWLPFVNEYLDKGAIYQNDYLVYCIVYLFDIADFDRALSLAEKAIEQNQSMPQGWQTTLPNFVADQIYNWTDKTAAAGQSVEPYFTQTFKNVATQWKLHEIVTAKWLKLAAALLLRSPQGKVQASGIDDAETLVLAIQLCNRAFQLNQKAGVKNMIERCVMRLNALAKSGDYDPNRLPQVAGLSLEPSQIDFDLVIKKLTARPLQNSEEGNV*	hallmark_hmm	common_virus	C0	10925.0	0	10925	GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote_CDS_0008	shell	direct	high	818	0.999	GCA_005888215.1_01334
GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote	cenote	CDS	6868	7320	GCA_005888215.1	LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215.1_LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215_1_86	GCA_005888215_1_86@C0	6869	7321	GCA_005888215_1_86_9	GCA_005888215_1_86_9	+	10924	.	PFAM:PF05926.10	head-completion-protein	MFNGRTQDYDDTVITNNGFWSDIYVEEFQKQRAIPLQIPVEMVKTALIAAMQGVNLDLAEVEENHRKSAVNSVTEISSSLINGENYAETLYKKAVFARAKAELLPEFNTLSGREIHQNRDYVTEQKSLLAEATHAIRTLKGKKRGSVWLL*	hallmark_hmm	common_virus	C0	10925.0	0	10925	GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote_CDS_0009	shell	direct	high	452	0.998	GCA_005888215.1_01335
GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote	cenote	CDS	7308	7790	GCA_005888215.1	LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215.1_LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215_1_86	GCA_005888215_1_86@C0	7309	7791	GCA_005888215_1_86_10	GCA_005888215_1_86_10	+	10924	.	PFAM:PF06891.10	phage-tail-completion-protein	MATVKKMRYQQLTAFLLTKLPKRYHGNFYSWIEDGKLLNEGRQVTENGIEVCHLSYNGVFHFEALPFNEISPAYLMAHIQVWVNENDPMRDVLDESEIPFDLDIIDDNTADLIFTIAFREPLTAMEDSEGELKIEGVNYRLDDIDVFTAEYIDVVVTVEQ*	hallmark_hmm	common_virus	C0	10925.0	0	10925	GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote_CDS_0010	shell	direct	high	482	0.998	GCA_005888215.1_01336
GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote	cenote	CDS	7799	8512	GCA_005888215.1	LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215.1_LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215_1_86	GCA_005888215_1_86@C0	7800	8513	GCA_005888215_1_86_11	GCA_005888215_1_86_11	+	10924	.	PFAM:PF05069.12	Virion-morphogenesis-family	MGLKPGTVEKLKHTLLYLRLTPKMRNQVMQKVLWRLKKNAEKNVSHQQSPDGKTWTPRKKKLKGGVRKNKLLKESATNLNSKLEQQGERGKLFYKNPHWAKVRAIHQYGLEVPVEQTEKDKKALAKLLAQNNQPATPQQARRLRELGYQVRNGKTKTGKQKYKKVRLKSIRQTMSRGQAGLIIRMMEKQKGINIRRGLASYKMAKREFLDENPKRNADIITEELLKGFEKAGYHLQP*	hallmark_hmm	common_virus	C0	10925.0	0	10925	GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote_CDS_0011	shell	direct	high	713	0.999	GCA_005888215.1_01337
GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote	cenote	CDS	8642	8770	GCA_005888215.1	LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215.1_LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215_1_86	GCA_005888215_1_86@C0	8643	8771	GCA_005888215_1_86_12	GCA_005888215_1_86_12	+	10924	.	.	hypothetical protein	MKQYGLFKTIFGLGLLVIMARFPETIDSIANMISLLTTIRGQ*	.	hypothetical_protein	C0	10925.0	0	10925	GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote_CDS_0012	shell	direct	high	128	0.992	GCA_005888215.1_01338
GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote	cenote	CDS	8774	9904	GCA_005888215.1	LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215.1_LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215_1_86	GCA_005888215_1_86@C0	8775	9905	GCA_005888215_1_86_13	GCA_005888215_1_86_13	+	10924	.	PDB:3J9Q_Q	tail-sheath	MFPSVQINALNQLSGETKEIERHALFVGIGTTNQGKLLALTPDSDFDKVFGETDTDLKKQVRAAMLNAGQNWFAHVYIAQEDGYDFVECVKKANQTASFEYCVNTRYLGVDKASIGKLQECYAELLAKFGRRTFFIQAVQGINRNTSDGETWDQYVQKLTTLQQTLVADHVCLVPLLFGNEAGVLAGRLANRAVTVADSPARVQTGALVSLGSANKPLDKDGNELTLAHLKSLETARYSVPMWYPDYDGYYWADGRTLDVEGGDYQVIENVRVVDKVARKVRLLAIAKIADRSFNSTISSTEYHKNYFAKPLRDMSKSATINGKDFPGECMPPKDDAITIVWQSKTKVTIYIKVRPYDCPKEITANIFLDLDSLGE*	hallmark_hmm	common_virus	C0	10925.0	0	10925	GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote_CDS_0013	shell	direct	high	1130	0.999	GCA_005888215.1_01339
GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote	cenote	CDS	9908	10360	GCA_005888215.1	LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215.1_LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215_1_86	GCA_005888215_1_86@C0	9909	10361	GCA_005888215_1_86_14	GCA_005888215_1_86_14	+	10924	.	PFAM:PF10772.8	major-tail-protein	MERISGMSFDFYLFGLPIHAESISLSITDNSAVVQTRGIPDGWASGDVTAEGEIELDAKNFSKLSAAAAAAGSYRSLPETDFTFFAQRGGIRDKVETFGNKIILTDVLSIDPKGGAKSTKKLKYFVTSPDFVRINGVPYLSDEDTRDLLG*	hallmark_hmm	common_virus	C0	10925.0	0	10925	GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote_CDS_0014	shell	direct	high	452	0.998	GCA_005888215.1_01340
GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote	cenote	CDS	10447	10683	GCA_005888215.1	LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215.1_LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215_1_86	GCA_005888215_1_86@C0	10448	10684	GCA_005888215_1_86_15	GCA_005888215_1_86_15	+	10924	.	pfam16080	Bacteriophage holin family HP1. Phage_holin_2_3 is a family of small hydrophobic phage proteins called holins with one transmembrane domain. Holins are produced by double-stranded DNA bacteriophages that use an endolysin-holin strategy to achieve lysis of their hosts. The endolysins are peptidoglycan-degrading enzymes that are usually accumulated in the cytosol until access to the cell wall substrate is provided by the holin membrane lesion.	MNSKIDSTIPFIGSLTALISGYSLHEWASLFGILFGAVSVWFAYRKYKEDVQARKDELAYKMLAAKIEAKKLGIAIDE*	mmseqs_cdd	common_virus	C0	10925.0	0	10925	GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote_CDS_0015	shell	direct	high	236	0.996	GCA_005888215.1_01341
GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote	cenote	CDS	10676	10921	GCA_005888215.1	LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215.1_LNKO01000089.1	GCA_005888215.1|LNKO01000089.1	GCA_005888215_1_86	GCA_005888215_1_86@C0	10677	10922	GCA_005888215_1_86_16	GCA_005888215_1_86_16	+	10924	.	CDD:cd16901	P1-lysozyme	MSKKLGAMILCSAAAVVTAFFAQQKDLPAQQQNQVSLKAVSMIVNLEGCVRNPYKCPADVWTNGVGNTHNVDKTKILTIDEV	common_virus_hmm	common_virus	C0	10925.0	0	10925	GCA_005888215.1|LNKO01000089.1@region_1_10925@tool_cenote_CDS_0016	shell	ambiguous	low	9	0.037	GCA_005888215.1_01341
GCA_005888215.1|LNKO01000091.1@region_1_5363@tool_cenote	cenote	CDS	2	2062	GCA_005888215.1	LNKO01000091.1	GCA_005888215.1|LNKO01000091.1	GCA_005888215.1_LNKO01000091.1	GCA_005888215.1|LNKO01000091.1	GCA_005888215_1_88	GCA_005888215_1_88	3	2063	GCA_005888215_1_88_1	GCA_005888215_1_88_1	+	5363	.	PFAM:PF10145.8	tail-tape-measure-protein-	VRSLGVADDALEKLSKTALNFSSQYGESAVDFVRSSYDIQSAIAGLNGNELAEFTKTSNLLAKGTKASAATITNYMGTMYGIFAEDATKLGNANWVNKIAGQTALAVKMFKTSGDGMSAAFKSLGAAAKSAKIDVAEQVGVLGNLQASMSGSEAGTKYKAFLAGVGATQKELGLSFVDTNGDMLDMVTILNKIKGKFGDTLDVAQATKLKKAFGSDQAVDLIKFLLPKTKELKNNIADIAKVSDTKALAQMARSMVDPWSRLSQIITGVKTAIGGEILKKLDPIMHKVADLGQEFIDWLKTYKNIARWIGYIIGASIGFAAVAATISLVSGAMGLLKVGAIAAFAPIRGLLSLMSLLGKPLVLIRSAIMLIFAGFKTLISVVWAVINPLKMLRLVFAFAFSPLSILLLAGLAIYKFRHQLKDLWNGVKQGFGSLESHLAPLYRAFDIVKSAGQKVSNAIGRIAGLFSANAESAMLFQNVGVAVGQAIGFAFDVVLFVIELIARQIEAVATIFSNVADVIIATWHNVIDDWESKSAWDIFKGLATGIGQIFTTILKGIKDQFINTINWIIDKVNIVSGKIGFELPKIPNTWLSDHAQVTTVTAASNISSLGLNAAVDNASWKKSPSIDLPNNLKPQLNSMPQGSVTKTLTQNRTEQRTINYGGLAFYGYDKREITQELRNKEQLAAG*	hallmark_hmm	common_virus	NaN	.	0	5363	GCA_005888215.1|LNKO01000091.1@region_1_5363@tool_cenote_CDS_0001	shell	direct	moderate	1964	0.953	GCA_005888215.1_01345
GCA_005888215.1|LNKO01000091.1@region_1_5363@tool_cenote	cenote	CDS	2066	2401	GCA_005888215.1	LNKO01000091.1	GCA_005888215.1|LNKO01000091.1	GCA_005888215.1_LNKO01000091.1	GCA_005888215.1|LNKO01000091.1	GCA_005888215_1_88	GCA_005888215_1_88	2067	2402	GCA_005888215_1_88_2	GCA_005888215_1_88_2	+	5363	.	pfam10761	Protein of unknown function (DUF2590). This family of proteins has no known function.	MEKLYLDLLITGEDMTRDSGNQPLICDNRISIAQDIKHAILESGLATQLIAERSRIFRRDIILQMVLLVEEDARLIPGTVSISEARLGQLFITAETYEFGRLDELELRLNE*	mmseqs_cdd	nonviral_gene	NaN	.	0	5363	GCA_005888215.1|LNKO01000091.1@region_1_5363@tool_cenote_CDS_0002	shell	direct	high	335	0.997	GCA_005888215.1_01346
GCA_005888215.1|LNKO01000091.1@region_1_5363@tool_cenote	cenote	CDS	2394	3563	GCA_005888215.1	LNKO01000091.1	GCA_005888215.1|LNKO01000091.1	GCA_005888215.1_LNKO01000091.1	GCA_005888215.1|LNKO01000091.1	GCA_005888215_1_88	GCA_005888215_1_88	2395	3564	GCA_005888215_1_88_3	GCA_005888215_1_88_3	+	5363	.	PFAM:PF04865.13	Baseplate-J-like-protein	MSENFKQMLAESGLPTEETQIRQEFERLTAEEGLITNTSRMSPFWRLITAIAVKPVKWLTDHLIAEILPNLFVKTAKDSWLQLQAWTVGLDFKAATKAEGVVHFTKESDVTDLTIKAGTVIQTERINDVIFRLIVTKDTIIPKGVLRAPVPVIAEQAGANFNLATGYYRILPESIAGISAVENLGDWLTSPGADRETNDELRERYRTQFSSVGQHHIDSVYKGMIAKVAALSVDRIYFKHDAPRGPGTANAYLLLDTGVTSQPFIDKVNRHVRDEGFHGHGDDLLCFAMPETRHNVTCTIYFHSTIFVGDVRRQEILSQVENMIRAAFRENNNYNVTKTYPFRRFSWSKLGEEIHDSIGEIASIVWGQADIQSELSIPRIQQLSVTVQK*	hallmark_hmm	common_virus	NaN	.	0	5363	GCA_005888215.1|LNKO01000091.1@region_1_5363@tool_cenote_CDS_0003	shell	direct	high	1169	0.999	GCA_005888215.1_01347
GCA_005888215.1|LNKO01000091.1@region_1_5363@tool_cenote	cenote	CDS	3597	4097	GCA_005888215.1	LNKO01000091.1	GCA_005888215.1|LNKO01000091.1	GCA_005888215.1_LNKO01000091.1	GCA_005888215.1|LNKO01000091.1	GCA_005888215_1_88	GCA_005888215_1_88	3598	4098	GCA_005888215_1_88_4	GCA_005888215_1_88_4	+	5363	.	PFAM:PF09684.9	Tail-protein	MDKGELNKVAVLFGKWWDYVLSAVKFPFNILDEEHCSERILNLIAYQRDVERFEGEPLELFRKRVKYAFLNAKDAGSKAGFIRIFERLGIGYVEIEERFDRENWDVIKIRISDSQLAKKTALLNLIIRKYSRTCRRYTFEVITKETVSIYHGEFNHDHQSFYVKVN*	hallmark_hmm	common_virus	NaN	.	0	5363	GCA_005888215.1|LNKO01000091.1@region_1_5363@tool_cenote_CDS_0004	shell	direct	high	501	1.0	GCA_005888215.1_01348
GCA_005888215.1|LNKO01000091.1@region_1_5363@tool_cenote	cenote	CDS	4124	5362	GCA_005888215.1	LNKO01000091.1	GCA_005888215.1|LNKO01000091.1	GCA_005888215.1_LNKO01000091.1	GCA_005888215.1|LNKO01000091.1	GCA_005888215_1_88	GCA_005888215_1_88	4125	5363	GCA_005888215_1_88_5	GCA_005888215_1_88_5	+	5363	.	UniProtKB:R9TNR5_9VIRU	Tail-fiber-protein-	MASLITPQFERYVAEQTIARGTVQFDEFIFANIPGLNEHNLAQYLTMPTSAQIVHRQAVSQSGVINENAVVYSVTIGTEVGDFDFNFIGLINRSKNLLAVAVQTDTVKKIRNKNAVQGNSITRNILLEFSGAKALTGINVNANTWQIDFTVRLHGLDEKIRLTNRDLYGRAVFFDDSFLVKRKTGHQFTIQPGTAYVEGVRMDLGAEHHLTANSLPCSIYADVVHHCTVTGEYQTEIKYLTQSKADYVDTVNRQHYVQILADIDSQGNVTDRRLLSPFLGMNPLTLDDTTENNKDKQGHTHKLPIASLVKKGIVKLFSGYDSDAEDMAATSKAVKIAYDKAVEAKTTADGKVGLNGNESINGEKSFENRIVAKRNIRISDNPIYASRGDYLNIGANDGDCWFEYKSSNREIGT	hallmark_hmm	common_virus	NaN	.	0	5363	GCA_005888215.1|LNKO01000091.1@region_1_5363@tool_cenote_CDS_0005	.	unmatched_CDS	none	0	0	.
GCA_005888215.1|LNKO01000009.1@region_1_4374@tool_cenote	cenote	CDS	1	342	GCA_005888215.1	LNKO01000009.1	GCA_005888215.1|LNKO01000009.1	GCA_005888215.1_LNKO01000009.1	GCA_005888215.1|LNKO01000009.1	GCA_005888215_1_9	GCA_005888215_1_9	2	343	GCA_005888215_1_9_1	GCA_005888215_1_9_1	+	4374	.	PF18812.1	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	FAAGVLSAESKDLLKSKTGTVWLSDDTLIKQFNSRDGQDFGLESYALFPDLFNQPDIVLQDNDRFYFIKNFEKQRILGVIKHLSKFNEIFVLSAREINIKEVEKMKGKLAVIK*	hhsuite_tools	hypothetical_protein	NaN	.	0	4374	GCA_005888215.1|LNKO01000009.1@region_1_4374@tool_cenote_CDS_0001	shell	direct	moderate	326	0.953	GCA_005888215.1_00139
GCA_005888215.1|LNKO01000009.1@region_1_4374@tool_cenote	cenote	CDS	485	838	GCA_005888215.1	LNKO01000009.1	GCA_005888215.1|LNKO01000009.1	GCA_005888215.1_LNKO01000009.1	GCA_005888215.1|LNKO01000009.1	GCA_005888215_1_9	GCA_005888215_1_9	486	839	GCA_005888215_1_9_2	GCA_005888215_1_9_2	+	4374	.	CDD:TIGR01635	phage-virion-morphogenesis-protein	MIDIEINNAQEIASALERLAQATAHRAPLMRSIAGTMESAVLQNFDVGGRPKWLGLKYRQGTPLVDTENLMASITSEYRSYPTFTLWQISRYRRQTNRCGGMVCNRYKWRGCGGVGK*	hallmark_hmm	common_virus	NaN	.	0	4374	GCA_005888215.1|LNKO01000009.1@region_1_4374@tool_cenote_CDS_0002	shell	direct	high	353	0.997	GCA_005888215.1_00140
GCA_005888215.1|LNKO01000009.1@region_1_4374@tool_cenote	cenote	CDS	780	1715	GCA_005888215.1	LNKO01000009.1	GCA_005888215.1|LNKO01000009.1	GCA_005888215.1_LNKO01000009.1	GCA_005888215.1|LNKO01000009.1	GCA_005888215_1_9	GCA_005888215_1_9	781	1716	GCA_005888215_1_9_3	GCA_005888215_1_9_3	+	4374	.	pfam10123	Mu-like prophage I protein. Members of this family of proteins comprise various viral Mu-like prophage I proteins.	MEAWYVTDTNGADVVALANNQRNPLPIDYEHQIIHSLKNGKEAPSAGWMEYFYFTPQGIFADVRWTDKAADYIKNGEYRYISAVFAYDTDGYVRKIFHAALTNTPALDGMDEAMVAASVNLLQEDNPMDKKLLAALCSLFVLKADASEADITEKVTALSAAKGDSPVDVLDVYAKLAEKEQSVAALSTQVGNPDPAKFVPVEQVAALQADFNALKTSVEADKKAALITAALSQGKLAPALKDWAQSLSIEALTGYLDKATPIAALAGGHQANEDPDKGNVAALTAEQQAAAKMLGMNDADYIKKYQSQEAK*	mmseqs_cdd	common_virus	NaN	.	0	4374	GCA_005888215.1|LNKO01000009.1@region_1_4374@tool_cenote_CDS_0003	shell	direct	high	935	0.999	GCA_005888215.1_00141
GCA_005888215.1|LNKO01000009.1@region_1_4374@tool_cenote	cenote	CDS	1715	2635	GCA_005888215.1	LNKO01000009.1	GCA_005888215.1|LNKO01000009.1	GCA_005888215.1_LNKO01000009.1	GCA_005888215.1|LNKO01000009.1	GCA_005888215_1_9	GCA_005888215_1_9	1716	2636	GCA_005888215_1_9_4	GCA_005888215_1_9_4	+	4374	.	PFAM:PF10124.8	Major-Capsid-protein	MSINKAQVLNHITEAFRKEFIKGLENHPTQWAKIAMEISSTTKTNTYGFLGTFPKMREWVGQRQIQSMQAQGTSITNKKFESTVGIPREDIEDDQVGLYTPMMQLAGQSAAELPDDEVFSLLKKGKSTLCYDGQNFFDTDHPVFEKVDGTGNSTTQVNLTVGTDNDAPTFYIVDARLPIKPLIWQKRTAPEIEPKFDPAKSEHVFMEDEYLWGVRARGAAGFGFWQLIHRVEKTNLTKENVQKVIQTMKGLKGDGGKALNIQPNLILVPTNLEYAAKELFKTKQINGTTNILESELDVLASPFINE*	hallmark_hmm	common_virus	NaN	.	0	4374	GCA_005888215.1|LNKO01000009.1@region_1_4374@tool_cenote_CDS_0004	shell	direct	high	920	0.999	GCA_005888215.1_00142
GCA_005888215.1|LNKO01000009.1@region_1_4374@tool_cenote	cenote	CDS	2671	3006	GCA_005888215.1	LNKO01000009.1	GCA_005888215.1|LNKO01000009.1	GCA_005888215.1_LNKO01000009.1	GCA_005888215.1|LNKO01000009.1	GCA_005888215_1_9	GCA_005888215_1_9	2672	3007	GCA_005888215_1_9_5	GCA_005888215_1_9_5	+	4374	.	PF17891.1	Mu-like prophage FluMu N-terminal domain	MAKKNQKDDVTQDVQTAPDEQAQPQVETSADNAESAVEKYDESDDKEGQVIVPIGYSVKLREIHPQATYGRCGYRFNKESAVEIPVENLTSEQVIMLAEDPWLELIPICEK*	hhsuite_tools	hypothetical_protein	NaN	.	0	4374	GCA_005888215.1|LNKO01000009.1@region_1_4374@tool_cenote_CDS_0005	shell	direct	high	335	0.997	GCA_005888215.1_00143
GCA_005888215.1|LNKO01000009.1@region_1_4374@tool_cenote	cenote	CDS	3016	3447	GCA_005888215.1	LNKO01000009.1	GCA_005888215.1|LNKO01000009.1	GCA_005888215.1_LNKO01000009.1	GCA_005888215.1|LNKO01000009.1	GCA_005888215_1_9	GCA_005888215_1_9	3017	3448	GCA_005888215_1_9_6	GCA_005888215_1_9_6	+	4374	.	CDD:cd08053	head-to-tail-adaptor	MHYASAEDFVLRVGEVQAIELTDRDLTGQVNDNLLDVALSDSSSQIDGYLAARYTLPLVSVPQNLVRLCCDLARYRLASMSHVTITEEIITRYKLSLKELEDISMGKISLGLPPTENNDANEHDNGVIFTNPKNRIFARDHSN*	hallmark_hmm	common_virus	NaN	.	0	4374	GCA_005888215.1|LNKO01000009.1@region_1_4374@tool_cenote_CDS_0006	shell	direct	high	431	0.998	GCA_005888215.1_00144
GCA_005888215.1|LNKO01000009.1@region_1_4374@tool_cenote	cenote	CDS	3431	3652	GCA_005888215.1	LNKO01000009.1	GCA_005888215.1|LNKO01000009.1	GCA_005888215.1_LNKO01000009.1	GCA_005888215.1|LNKO01000009.1	GCA_005888215_1_9	GCA_005888215_1_9	3432	3653	GCA_005888215_1_9_7	GCA_005888215_1_9_7	+	4374	.	PDB:3FZ2_G	tail-completion-protein	MITQIENALVERLQRGLGRLVNTVKSYGGELDDESLGTSRLPMCLVTFGGARIERMGTNLKRHQSTCLFCKRH*	hallmark_hmm	common_virus	NaN	.	0	4374	GCA_005888215.1|LNKO01000009.1@region_1_4374@tool_cenote_CDS_0007	shell	direct	high	221	0.995	GCA_005888215.1_00145
GCA_005888215.1|LNKO01000009.1@region_1_4374@tool_cenote	cenote	CDS	4035	4373	GCA_005888215.1	LNKO01000009.1	GCA_005888215.1|LNKO01000009.1	GCA_005888215.1_LNKO01000009.1	GCA_005888215.1|LNKO01000009.1	GCA_005888215_1_9	GCA_005888215_1_9	4036	4374	GCA_005888215_1_9_8	GCA_005888215_1_9_8	+	4374	.	pfam13018	Extended Signal Peptide of Type V secretion system. This conserved domain is called ESPR for Extended Signal Peptide Region. It is present at the N-terminus of the signal peptides of proteins belonging to the Type V secretion systems, including the autotransporters (T5aSS), TpsA exoproteins of the two-partner system (T5bSS) and trimeric autotransporters (TAAs). So far, the ESPR is present only in Gram-negative bacterial proteins originating from the classes Beta- and Gamma-proteobacteria. ESPR severely impairs inner membrane translocation, suggesting that it adopts a particular conformation or it interacts with a cytoplasmic or inner membrane co-factor, prior to exportation. Deletion of ESPR causes mis-folding of the TAAs passenger domain in the periplasm, substantially impairing its translocation across the outer membrane.	MNKIYRLKFSKRLNQLVAVSEITAGHDRHSGCQNAVDTTSSFQMTKWLKLKPLASLISLLSFGFATQTAMANGLQGMEVVSGSASMSINGKSTTITNSPNAIINWKQFNINQD	mmseqs_cdd	nonviral_gene	NaN	.	0	4374	GCA_005888215.1|LNKO01000009.1@region_1_4374@tool_cenote_CDS_0008	.	unmatched_CDS	none	0	0	.
GCA_005888215.1|LNKO01000104.1@region_1_1980@tool_cenote	cenote	CDS	1	333	GCA_005888215.1	LNKO01000104.1	GCA_005888215.1|LNKO01000104.1	GCA_005888215.1_LNKO01000104.1	GCA_005888215.1|LNKO01000104.1	GCA_005888215_1_99	GCA_005888215_1_99	2	334	GCA_005888215_1_99_1	GCA_005888215_1_99_1	+	1980	.	.	hypothetical protein	FAAGVLSAESKDLLKSKTGTVWLSDDTLIKQFNSRDGQDFGIDEYESLPDIINALEHLLQVKDFADRYTFIRQGKMLVVKILPKEIFVLSFRRIKDKELKKLLEKDYALR*	.	hypothetical_protein	NaN	.	0	1980	GCA_005888215.1|LNKO01000104.1@region_1_1980@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_005888215.1|LNKO01000104.1@region_1_1980@tool_cenote	cenote	CDS	457	873	GCA_005888215.1	LNKO01000104.1	GCA_005888215.1|LNKO01000104.1	GCA_005888215.1_LNKO01000104.1	GCA_005888215.1|LNKO01000104.1	GCA_005888215_1_99	GCA_005888215_1_99	458	874	GCA_005888215_1_99_2	GCA_005888215_1_99_2	+	1980	.	CDD:TIGR01635	phage-virion-morphogenesis-protein	MIEIEINNAQEIASALERLAQATAHRAPLMRSIAGTMESAVAQNFEVGGRPAWKKLKIRQGTPLVDTENLMASITSEYNNNEAIVGTNEPYAAIHQFGGKAGRGRKVAIPARPFLILTPQDEADILEDIQDYFQRLIN*	hallmark_hmm	common_virus	NaN	.	0	1980	GCA_005888215.1|LNKO01000104.1@region_1_1980@tool_cenote_CDS_0002	persistent	direct	high	416	0.998	GCA_005888215.1_01654
GCA_005888215.1|LNKO01000104.1@region_1_1980@tool_cenote	cenote	CDS	1033	1209	GCA_005888215.1	LNKO01000104.1	GCA_005888215.1|LNKO01000104.1	GCA_005888215.1_LNKO01000104.1	GCA_005888215.1|LNKO01000104.1	GCA_005888215_1_99	GCA_005888215_1_99	1034	1210	GCA_005888215_1_99_3	GCA_005888215_1_99_3	+	1980	.	TIGR00705	signal peptide peptidase SppA, 67K type. This model represents the signal peptide peptidase A (SppA, protease IV) as found in E. coli, Treponema pallidum, Mycobacterium leprae, and several other species, in which it has a molecular mass around 67 kDa and a duplication such that the N-terminal half shares extensive homology with the C-terminal half. This enzyme was shown in E. coli to form homotetramers. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both. [Protein fate, Degradation of proteins, peptides, and glycopeptides]	MGNSQDFRFLTFNGYVSQNLRTATSAPIQKLQKELNVLTKFNDPKGQYLYCLNCGKVK*	mmseqs_cdd	nonviral_gene	NaN	.	0	1980	GCA_005888215.1|LNKO01000104.1@region_1_1980@tool_cenote_CDS_0003	.	unmatched_CDS	none	0	0	.
GCA_005888215.1|LNKO01000104.1@region_1_1980@tool_cenote	cenote	CDS	1247	1978	GCA_005888215.1	LNKO01000104.1	GCA_005888215.1|LNKO01000104.1	GCA_005888215.1_LNKO01000104.1	GCA_005888215.1|LNKO01000104.1	GCA_005888215_1_99	GCA_005888215_1_99	1248	1979	GCA_005888215_1_99_4	GCA_005888215_1_99_4	-	1980	.	COG3475	Phosphorylcholine metabolism protein LicD [Lipid transport and metabolism]. 	LCEKHQIRYSLGGGTLIGAIRHQGFIPWDDDIDVYMHRDEYQKFINAWLHEKHERYSIGTAEDILASNTGEMTKIFDNKTKTIDINGNENKIFIDIFIYDGIPNNKKIIYTIIKKYRKRKNRFASCKKRWIRASQNSLKYTILNWLSNLLFHRMQNYLSEIQKLHPINTSENIGLLMTEYRNWNKAYMPRAYFNHVIYKEFEGRQFQVMNGYHEHLTQYYGDYMKLPPEEDQKPHHIQEAYIL*	mmseqs_cdd	nonviral_gene	NaN	.	0	1980	GCA_005888215.1|LNKO01000104.1@region_1_1980@tool_cenote_CDS_0004	persistent	direct	moderate	627	0.857	GCA_005888215.1_01655
GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote	cenote	tRNA	19591	19661	GCA_005888215.1	LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215.1_LNKO01000045.1	GCA_005888215.1|LNKO01000045.1	GCA_005888215_1_44	GCA_005888215_1_44@C0	19592	19662	tRNA-Trp	tRNA-Trp	+	42467	.	tRNAscan-SE score: 35.1	Trp	NA	tRNAscan-SE	.	C0	42468.0	0	42468	GCA_005888215.1|LNKO01000045.1@region_1_42468@tool_cenote_tRNA_0001	.	.	.	.	.	.