core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote	cenote	CDS	1566683	1567282	GCA_006094375.1	CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375.1_CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375_1_1	GCA_006094375_1_1@C102	1	600	GCA_006094375_1_1_1434	GCA_006094375_1_1_1434	-	2466502	.	.	hypothetical protein	MFVKEEKPVNKIVEILRKTSSHLFKFHGEVAMHLFLNDDFILPSKIDICVERKKLLEIIRVIPEEFTIHYYDNQLYERLRESLSLSDVEHVKVFKNDTEVMTIFVYDVVNDEWLFRLDHHIRLPKNNIYFHSLSWNVDYIKPEIVLMYDLMSEQKYHQFSNYKAVIDSLSYYQFYILKLVVGEQRIKKAIVNSSTKKIS*	.	hypothetical_protein	C102	13084	1566683	1579767	GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote_CDS_0001	persistent	direct	high	599	0.998	GCA_006094375.1_01515
GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote	cenote	CDS	1567609	1568481	GCA_006094375.1	CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375.1_CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375_1_1	GCA_006094375_1_1@C102	927	1799	GCA_006094375_1_1_1435	GCA_006094375_1_1_1435	+	2466502	.	.	hypothetical protein	MSLTIILSIIIIILIMAMVLNQKFMKDRVETEEYARNQLISKNSILSEENLSLKNQMLSTNNDVGQHAFKNAKRELRKILNRFKEEGRLRSYTIVPTSNLAVKHPLFEYARSFDFIIITDVGLINVDVKNWNQKTFYHFDVPDQHLEEGQPQYNTEKVVGHYISNRYHSQFKTTRSGVYTFIEILQDNRVIYEFYDHDPYDKAANNAKALKDKIENDYNFKIQSIGVIYFSDGSVNIIEGSDESDKYVDTVSTPISLEKVIEEAIDLSKHPLTDKQIEEISENFKQHMNN*	.	hypothetical_protein	C102	13084	1566683	1579767	GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote_CDS_0002	persistent	direct	high	872	0.999	GCA_006094375.1_01516
GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote	cenote	CDS	1569217	1569738	GCA_006094375.1	CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375.1_CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375_1_1	GCA_006094375_1_1@C102	2535	3056	GCA_006094375_1_1_1436	GCA_006094375_1_1_1436	-	2466502	.	PDB:1RKN_A	Thermonuclease	MSSLLVVAMIGILVIIFQFVNHSGPFSGSESQHQSDNSNLNGKDKVYVKRVVDGDTFVAQKNGEEIKVRLIGVDTPETVKPNTPVQPYGKQASNYTKKYLTHQNVYLEYDKEKTDRYGRTLAYVWLKNGDMFNESLVKKGLAREKYFSPNGKYRDTFVNAQEEAKKRKLNIWS*	common_virus_hmm	common_virus	C102	13084	1566683	1579767	GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote_CDS_0003	persistent	direct	high	521	0.998	GCA_006094375.1_01517
GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote	cenote	CDS	1569897	1570106	GCA_006094375.1	CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375.1_CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375_1_1	GCA_006094375_1_1@C102	3215	3424	GCA_006094375_1_1_1437	GCA_006094375_1_1_1437	+	2466502	.	.	hypothetical protein	MMLGVKEMDTSNENKITIIAVIVAIIVGVVLQIVFKLPLIVSLVGSVFLGMFVGFIVYLIQSFRRKKKN*	.	hypothetical_protein	C102	13084	1566683	1579767	GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote_CDS_0004	persistent	direct	moderate	188	0.895	GCA_006094375.1_01518
GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote	cenote	CDS	1570275	1570877	GCA_006094375.1	CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375.1_CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375_1_1	GCA_006094375_1_1@C102	3593	4195	GCA_006094375_1_1_1438	GCA_006094375_1_1_1438	-	2466502	.	cd19930	phosphoacceptor receiver (REC) domain of DesR and similar proteins. This group is composed of Bacillus subtilis DesR, Streptococcus pneumoniae response regulator spr1814, and similar proteins, all containing an N-terminal REC domain and a C-terminal LuxR family helix-turn-helix (HTH) DNA-binding output domain. DesR is a response regulator that, together with its cognate sensor kinase DesK, comprises a two-component regulatory system that controls membrane fluidity. Phosphorylation of the REC domain of DesR is allosterically coupled to two distinct exposed surfaces of the protein, controlling noncanonical dimerization/tetramerization, cooperative activation, and DesK binding. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	MISLVITEDQLMLRKAMVQLIEMHEEMNVIKDFENGVEALEFIENNEPNVAILDIEIPGLTGLEILSYVRKKQLNTRIIIVTTFKRPGYFEKAVANDVDAYVLKERSIDDLIKTIYKVTKGEKEYSPSLMTSLFTESNPLTHKEQVVLREIGNGLSSKEIASKLYLSNGTVRNYTSTIIDKMNSDHRFEAWKKANEKGWI*	mmseqs_cdd	nonviral_gene	C102	13084	1566683	1579767	GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote_CDS_0005	persistent	direct	high	602	0.998	GCA_006094375.1_01519
GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote	cenote	CDS	1570874	1571968	GCA_006094375.1	CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375.1_CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375_1_1	GCA_006094375_1_1@C102	4192	5286	GCA_006094375_1_1_1439	GCA_006094375_1_1_1439	-	2466502	.	COG4585	Signal transduction histidine kinase  [Signal transduction mechanisms]. 	MESRSWGVRIGELSTLIYLIFPILAIFVDKRGNFLTYLIVCTIFIISYVTMIIFYKYLSDSILYSLLVIHYLGIFYFVYSVNPMNSLFFFYSAFALPFIFNVRVVSKEFITFLIAMISCLILTYIFNPTFVVPLSAFYLVILIVAVGNFKNRDERIMKAKLEEKNKYINVLIAQQERNRISQDLHDTLGHVFASLTLKSELAVKLIDTNPKEAKNEMQAINQLSTEALNKVRLIIDDLKIQSFEDEISSLEHLLQNANLHFKFNNKSAAKSLNPAKQSILSMIFREAINNVIKHAHATEVIGELKVHEHQIILKIKDNGVGIENEDASNLKSIKERVDYLNGKLIVQSNNGTLIIVEIPRGDLL*	mmseqs_cdd	nonviral_gene	C102	13084	1566683	1579767	GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote_CDS_0006	persistent	direct	high	1094	0.999	GCA_006094375.1_01520
GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote	cenote	CDS	1571968	1572699	GCA_006094375.1	CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375.1_CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375_1_1	GCA_006094375_1_1@C102	5286	6017	GCA_006094375_1_1_1440	GCA_006094375_1_1_1440	-	2466502	.	COG0842	ABC-type multidrug transport system, permease component [Defense mechanisms]. 	MISTYFKIELKIIFRKKLYLVMSIFLPVVFYLLFTSILDMPEEAKLKFYKEYMYSMTVFSLMNFCLLSFPLDLIEERNQGWYKRLMVTPLSSFQYYLVKISKTMCQFLIAITIIFSVAHFYKDVHMTVFQWIFSALTLWIGVSLFLTLGLIIAQLNDIQKASSFANLLNITLAILGGLWFPVYTFPDWLQSISKHMPTYNLKLLAIDLAQNKGVNIEAFGYLVVYCIIFVSIALFMNKKGDVH*	mmseqs_cdd	nonviral_gene	C102	13084	1566683	1579767	GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote_CDS_0007	persistent	direct	high	731	0.999	GCA_006094375.1_01521
GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote	cenote	CDS	1572696	1573571	GCA_006094375.1	CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375.1_CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375_1_1	GCA_006094375_1_1@C102	6014	6889	GCA_006094375_1_1_1441	GCA_006094375_1_1_1441	-	2466502	.	COG1131	ABC-type multidrug transport system, ATPase component [Defense mechanisms]. 	MIELRHISKSFKEHKVLEDISIDIKNNCCTALIGKNGAGKSTLIDIIVGNNHYDSGQIADKSNLLNRHKMGILFQKTEFPKYIKVCELLHLYQSFYQTFISFHQFKEITQFSDRQMNQFACNLSGGQQRILDFALALVGKPELLILDEPTSAMDVEMRQHFWNVIDKLKMNNTTILYTSHYIEEVERMADQVMMLDKGKIQLDDSPENIKRNQSYSVIRIPCKYQELINQLKHKYEIELIKNRYEIKTTDVSDVLQLLKQYHVNFNKIEILKKSLLEVMFSNDLSKGGNYQ*	mmseqs_cdd	nonviral_gene	C102	13084	1566683	1579767	GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote_CDS_0008	persistent	direct	high	875	0.999	GCA_006094375.1_01522
GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote	cenote	CDS	1573749	1575221	GCA_006094375.1	CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375.1_CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375_1_1	GCA_006094375_1_1@C102	7067	8539	GCA_006094375_1_1_1442	GCA_006094375_1_1_1442	-	2466502	.	PDB:2ZE9_A	Phospholipase-D	MNFGFLGTILTILLVVGFITNVVLAFVIIFLERDRRTASSTWAWLFVLFVLPVIGFILYLFLGRTVSKKKMEKNNGDELHAFEDLVQDQIDSFDKHNYGYINDQVIKHRDLIRMLLMKQDAFLTENNKIDLFTDGHKLYEKVLEDIYNAQDYIHLEYYTFELDGLGKRILDALETKLKEGLEVKLLYDDVGSKKVRLSKFKHFRALGGEVEAFFPSKVPLINFRMNNRNHRKIIIIDGQIGYVGGFNVGDDYLGLGKLGYWRDTHTRVQGECIDALQLRFILDWNSQSHRPQFKFDQKYFPKKNGDKGNAAIQIASSGPAFDLHQIEYGYTKMIMSAKKSIYLQSPYFIPDQSYINALKMAANSGVEVNLMIPCKPDHPFVYWATFSNAADLLDSGVNIYTYQNGFIHSKILMIDDEISSIGSANMDFRSFELNFEVNAFIYDEDIAKQLRQAFEKDIEQSKLLTKEVYDKRPLSIKFKEGLAKLISPIL*	common_virus_hmm	common_virus	C102	13084	1566683	1579767	GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote_CDS_0009	persistent	direct	high	1472	0.999	GCA_006094375.1_01523
GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote	cenote	CDS	1575279	1575476	GCA_006094375.1	CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375.1_CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375_1_1	GCA_006094375_1_1@C102	8597	8794	GCA_006094375_1_1_1443	GCA_006094375_1_1_1443	-	2466502	.	.	hypothetical protein	MQQIKFKTLTEETLESLEKSVNSFLKSQEGNGYKLLNITIKQIEERAFPHNDEDFNAILTLVTEA*	.	hypothetical_protein	C102	13084	1566683	1579767	GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote_CDS_0010	persistent	direct	high	197	0.995	GCA_006094375.1_01524
GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote	cenote	CDS	1575790	1576815	GCA_006094375.1	CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375.1_CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375_1_1	GCA_006094375_1_1@C102	9108	10133	GCA_006094375_1_1_1444	GCA_006094375_1_1_1444	+	2466502	.	COG2008	Threonine aldolase [Amino acid transport and metabolism]. 	MISFENDYLEGAHEKVLNRLVETNRIQAAGYGFDDFSAQAADKIRQRIDCPDATIRFLVGGTQTNQVVINSMLDSYEGVISADTGHVAVHEGGAIEFSGHKVLTIPSQEGKITAQDVENYIETFESDFKKEHMVYPGMVYISHPTEYGTLYTKEELQSLSRVCRRHQIPLFMDGARLGYGLMSNQTNVTIEDVAKYCDVFYIGGTKIGALCGEAIVFTKQNEPKNFTTIIKHHGALLAKGRLTGVQFLELFTDDLYFDISRHAIKMAEKVKKGFIDKGYQVYFDSPTNQQFFILSNDKIEELKQKVKFAVWEKYDNQHRVVRFATSWATTEENVNQLLELI*	mmseqs_cdd	nonviral_gene	C102	13084	1566683	1579767	GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote_CDS_0011	persistent	direct	high	1025	0.999	GCA_006094375.1_01525
GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote	cenote	CDS	1576885	1577568	GCA_006094375.1	CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375.1_CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375_1_1	GCA_006094375_1_1@C102	10203	10886	GCA_006094375_1_1_1445	GCA_006094375_1_1_1445	+	2466502	.	pfam07553	Host cell surface-exposed lipoprotein. This is a family of lipoproteins that is involved in superinfection exclusion. Proteins in this family have been shown to act at the stage of DNA release from the phage head into the cell.	MQQERQSWYQKSWFIILTLLFIFPLGLFLMWRYAHWKNWLKLTVSSVYIISLVLTLLFQVSLLNENKTNQIEHASTMKEKSNINNVKTTKNKNMEKSTQTDKQNSVNLKQNTKDQNNNANDEAASPTSEQNAAIAQAKSYANTLPISKKSLYKQLTSEYGEKYPADIAQYAVDHISVDYKMNALRLAKSYVKNINISNQALYDQLVSENGEGFTPEEAQYAMNHLDR*	mmseqs_cdd	nonviral_gene	C102	13084	1566683	1579767	GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote_CDS_0012	persistent	direct	high	683	0.999	GCA_006094375.1_01526
GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote	cenote	CDS	1577819	1578202	GCA_006094375.1	CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375.1_CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375_1_1	GCA_006094375_1_1@C102	11137	11520	GCA_006094375_1_1_1446	GCA_006094375_1_1_1446	-	2466502	.	PDB:6B0X_d	capsid-scaffolding-protein	MKDAIQEAEKLAKMNKDQKNQYELEKLLKENEELKAEKALSQMKNETRSMLNESGLENFDDQIVNILVNTDAEKTRKNVESFTNLLNQMVKSNVEKALRQDSPVSTQSNKMTKDEESDYLVSGRKCL*	hallmark_hmm	common_virus	C102	13084	1566683	1579767	GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote_CDS_0013	shell	direct	high	383	0.997	GCA_006094375.1_01527
GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote	cenote	CDS	1578199	1578366	GCA_006094375.1	CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375.1_CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375_1_1	GCA_006094375_1_1@C102	11517	11684	GCA_006094375_1_1_1447	GCA_006094375_1_1_1447	-	2466502	.	PFAM:PF14265.5	head-scaffolding-protein	MENNQSNITEETKHNDNLETTYEQTQQKEKTFSQEEVSQMIKDRLARKKRNLNNV*	phrogs_hmm	hypothetical_protein	C102	13084	1566683	1579767	GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote_CDS_0014	shell	direct	high	167	0.994	GCA_006094375.1_01528
GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote	cenote	CDS	1578527	1578721	GCA_006094375.1	CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375.1_CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375_1_1	GCA_006094375_1_1@C102	11845	12039	GCA_006094375_1_1_1448	GCA_006094375_1_1_1448	-	2466502	.	4A54_A	EDC3, MRNA DECAPPING COMPLEX SUBUNIT	MLIKDAYRKNVIVTLKNNEKFKGFVFDYENPLESDTGNYSLDLETDLGIYSIDESEIKSIKLIS*	hhsuite_tools	hypothetical_protein	C102	13084	1566683	1579767	GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote_CDS_0015	shell	direct	high	194	0.995	GCA_006094375.1_01529
GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote	cenote	CDS	1578723	1579076	GCA_006094375.1	CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375.1_CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375_1_1	GCA_006094375_1_1@C102	12041	12394	GCA_006094375_1_1_1449	GCA_006094375_1_1_1449	-	2466502	.	pfam15542	Bacterial toxin 50. A predicted RNase toxin found in bacterial polymorphic toxin systems that is proposed to adopt the BECR (Barnase-EndoU-ColicinE5/D-RelE) fold, and contains two conserved histidine, a serine, two lysine, and a threonine residue and a HxVP motif. In bacterial polymorphic toxin systems, the toxin is usually exported by the type 2, type 6, type 7, and MuF-type secretion systems.	MIRSGKIKLDINPEKQNRHSLNHSLYLKNKNFALKNNERLPSYTTLSINELNRLVQQYSTSGKILINKNGFNHKKVINFERIIGKAFIDGKYIETTFGKVHYSKTDSHIIPFISKEK*	mmseqs_cdd	nonviral_gene	C102	13084	1566683	1579767	GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote_CDS_0016	shell	direct	high	353	0.997	GCA_006094375.1_01530
GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote	cenote	CDS	1579119	1579766	GCA_006094375.1	CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375.1_CP035288.1	GCA_006094375.1|CP035288.1	GCA_006094375_1_1	GCA_006094375_1_1@C102	12437	13084	GCA_006094375_1_1_1450	GCA_006094375_1_1_1450	-	2466502	.	PFAM:PF06152.10	minor-capsid-protein	MKVSREKLLKQQLDLIVKDSALDIHDEIENKLVDREVERQAHILGEHVKIDDTEVKAVVNSNFKGVNWSTRLCQDMAVVQKEVEKTTSNVLLRGRHPNEYVAKFKKQTNTTTYNASRLLVTESACVQAESQKLTYLKDLGEDGEYKYVAKIDKKTSKICHSLNGKVFKVKDMMPGVNAPPMHPWCRSTTVTHVGNWRDRFFTERKGKYQTENKES*	hallmark_hmm	common_virus	C102	13084	1566683	1579767	GCA_006094375.1|CP035288.1@region_1566684_1579767@tool_cenote_CDS_0017	shell	direct	high	647	0.998	GCA_006094375.1_01531