core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	genomad_gene	genomad_length	genomad_strand	genomad_gc_content	genomad_genetic_code	genomad_rbs_motif	genomad_marker	genomad_evalue	genomad_bitscore	genomad_uscg	genomad_plasmid_hallmark	genomad_virus_hallmark	genomad_taxid	genomad_taxname	genomad_annotation_conjscan	genomad_annotation_amr	genomad_annotation_accessions	genomad_annotation_description	genomad_element_name_std	genomad_element_name_orig	genomad_element_gene_wrt_to_contig	genomad_element_gene_wrt_to_element	genomad_element_gene_start	genomad_element_gene_end	genomad_protein_translation	genomad_phage_region_id	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	genomad	CDS	2072306	2072749	GCA_007990545.2	AP019829.2	GCA_007990545.2|AP019829.2	GCA_007990545.2_AP019829.2	GCA_007990545.2|AP019829.2|provirus_2072306_2081737_1924	444	1	0.365	11	AGxAGG/AGGxGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	GCA_007990545.2|AP019829.2	1924	1	1	444	MVKRNKKQIAKAPKNHKTETQIQSVSIRSAPIPTYQELQGYENIEKGLASRIVAMAERQQKNRQKIEMQESQTFQRNQEKLVNGAIVSKILGQIIGGIAVLSAIIGSIYLLSIGKSLEGYASMIGAIGMLAVSLGLRNKDKGNKEKE	GCA_007990545.2|AP019829.2|provirus_2072306_2081737	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad_CDS_0001	cloud	direct	high	444	1.0	GCA_007990545.2_01930
GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	genomad	CDS	2073918	2074568	GCA_007990545.2	AP019829.2	GCA_007990545.2|AP019829.2	GCA_007990545.2_AP019829.2	GCA_007990545.2|AP019829.2|provirus_2072306_2081737_1925	651	-1	0.264	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	GCA_007990545.2|AP019829.2	1925	2	1613	2263	MEKKEEFIDFEHLGKAVKFFRKSRKMTQKELAEKLNKTPYTIKRYEKDGKIPLEVAKEIIEILHIPKLLLAGFIIDIPGLSNEVLDVETRKELFFDNDKEKMEKENREDILEKLIVSFGYKIYMNADTLGEENNLYIKRNEEKYATSLDNFGCILEKLIDIIEYHFKLELSNYKVEELPPDDNEPVIPAESLKNFLFDKMNEALYRSTNKKEKDTD	GCA_007990545.2|AP019829.2|provirus_2072306_2081737	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad_CDS_0002	cloud	direct	high	651	1.0	GCA_007990545.2_01931
GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	genomad	CDS	2074739	2074939	GCA_007990545.2	AP019829.2	GCA_007990545.2|AP019829.2	GCA_007990545.2_AP019829.2	GCA_007990545.2|AP019829.2|provirus_2072306_2081737_1926	201	1	0.244	11	AGGAG	GENOMAD.088459.VV	5.258e-05	41	0	0	1	1246	Caudoviricetes	NA	NA	PF06892;TIGR02147;COG5606;K07727	TIGR02147 family protein	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	GCA_007990545.2|AP019829.2	1926	3	2434	2634	MVNNKLKGKLKEYSFNYDNFSKVIGLSKTAFTNKINGKGFKDKEIARMKKIFNLTNDEVVEIFINE	GCA_007990545.2|AP019829.2|provirus_2072306_2081737	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad_CDS_0003	cloud	direct	high	201	1.0	GCA_007990545.2_01932
GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	genomad	CDS	2074953	2075159	GCA_007990545.2	AP019829.2	GCA_007990545.2|AP019829.2	GCA_007990545.2_AP019829.2	GCA_007990545.2|AP019829.2|provirus_2072306_2081737_1927	207	1	0.280	11	AGGAG	GENOMAD.069284.VV	5.074e-06	44	0	0	0	1246	Caudoviricetes	NA	NA	PF05339;COG5606;TIGR00673;K07727	Predicted DNA-binding protein, XRE-type HTH domain	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	GCA_007990545.2|AP019829.2	1927	4	2648	2854	MIQKNILKSKLSLKEKTQKDLAKALGLSKVSVSKKVNGLLRFSLPEVKKVKDYLDLTNDEVVEIFING	GCA_007990545.2|AP019829.2|provirus_2072306_2081737	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad_CDS_0004	cloud	direct	high	207	1.0	GCA_007990545.2_01933
GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	genomad	CDS	2075172	2076005	GCA_007990545.2	AP019829.2	GCA_007990545.2|AP019829.2	GCA_007990545.2_AP019829.2	GCA_007990545.2|AP019829.2|provirus_2072306_2081737_1928	834	1	0.323	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	GCA_007990545.2|AP019829.2	1928	5	2867	3700	MKELAILAGNNKIMINGIEIETKEYKGQRVITAWDIAKLHEREPREITQNFKYIKDKMILGLDYFTISRNEISKSKIMIQDFIPNNVKKIQLFTERGYLKLTKTFTDELSWKIQDMLVESYFIVVTGKIQPKQLTKIEVLKMALETELENERLRNENKAQCEIIKGLNGELEPYQLEDIINRIIRATGGNYGAKYNEVYRVFKERYHIDLKTRMTNYNKTVRAKDRFKSVLKYALANNYGKDLLNVVTTLFPESVRIVMDGINQNTGLGKDEPLLLD	GCA_007990545.2|AP019829.2|provirus_2072306_2081737	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad_CDS_0005	cloud	direct	high	834	1.0	GCA_007990545.2_01934
GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	genomad	CDS	2076224	2076397	GCA_007990545.2	AP019829.2	GCA_007990545.2|AP019829.2	GCA_007990545.2_AP019829.2	GCA_007990545.2|AP019829.2|provirus_2072306_2081737_1929	174	1	0.333	11	AGGA	GENOMAD.223072.VP	6.382e-13	63	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	GCA_007990545.2|AP019829.2	1929	6	3919	4092	MKTVRNAKVIFSKMGNGKGVRLNLSVPLLKSLGIDENNRDVTVEYDDETKTVIIKKS	GCA_007990545.2|AP019829.2|provirus_2072306_2081737	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad_CDS_0006	cloud	direct	high	174	1.0	GCA_007990545.2_01935
GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	genomad	CDS	2076675	2076836	GCA_007990545.2	AP019829.2	GCA_007990545.2|AP019829.2	GCA_007990545.2_AP019829.2	GCA_007990545.2|AP019829.2|provirus_2072306_2081737_1930	162	1	0.296	11	None	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	GCA_007990545.2|AP019829.2	1930	7	4370	4531	MLERLNLNIEMEWWKMKHKFEALEMVNKNSEKAREKEAKKIINRLKRMIKGIN	GCA_007990545.2|AP019829.2|provirus_2072306_2081737	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad_CDS_0007	cloud	direct	moderate	117	0.722	GCA_007990545.2_01936
GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	genomad	CDS	2076902	2077237	GCA_007990545.2	AP019829.2	GCA_007990545.2|AP019829.2	GCA_007990545.2_AP019829.2	GCA_007990545.2|AP019829.2|provirus_2072306_2081737_1931	336	1	0.268	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	GCA_007990545.2|AP019829.2	1931	8	4597	4932	MKMNERKEFFEDVVMEVTDEILESGTHGESESRLLKKDEKIKDKLAELFTYVKIAINEMRDETSRKSEKEIYEKYRKNIEKMYVDEVLCNSVIAVDILEKAEKITKKAFNK	GCA_007990545.2|AP019829.2|provirus_2072306_2081737	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad_CDS_0008	cloud	direct	high	336	1.0	GCA_007990545.2_01937
GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	genomad	CDS	2077250	2077471	GCA_007990545.2	AP019829.2	GCA_007990545.2|AP019829.2	GCA_007990545.2_AP019829.2	GCA_007990545.2|AP019829.2|provirus_2072306_2081737_1932	222	1	0.320	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	GCA_007990545.2|AP019829.2	1932	9	4945	5166	MEAKAEGMEESIIEWASFEFEVENKEKLDIIFNELKSNKKASDLLVHLINGVQDTFFELGKQVAKIENMKMRG	GCA_007990545.2|AP019829.2|provirus_2072306_2081737	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad_CDS_0009	cloud	direct	high	222	1.0	GCA_007990545.2_01938
GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	genomad	CDS	2077568	2078476	GCA_007990545.2	AP019829.2	GCA_007990545.2|AP019829.2	GCA_007990545.2_AP019829.2	GCA_007990545.2|AP019829.2|provirus_2072306_2081737_1933	909	1	0.328	11	AGGAG	GENOMAD.072903.VV	7.854e-15	78	0	0	0	1246	Caudoviricetes	NA	NA	COG3646	Phage regulatory protein Rha	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	GCA_007990545.2|AP019829.2	1933	10	5263	6171	MKAIQKNKTITSLELLKKINELREKEYLEKAKAGTLTEAERKKGKAVKLKHKSFLNVIRDEFENEITGQNILLSENLESNNEKTGLQNILETSQQKLLSVNKKITNVKIYVSKYKDKSGKENEMFVLALNQAKQVLMRESKYVRKAVIGYIDYLENQNRQLEELARLQARELAKATRNIETLNIKALLYYGKVSKPKQKFHYIHYTNLARDIAGIPKGLKRDELTQGQLGILQQVELIMSAVINECINEQIPFTLIYQEVRERTEIKARVLLKALQKIESVDNGPVWSLEYSENKGGNSYEQ	GCA_007990545.2|AP019829.2|provirus_2072306_2081737	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad_CDS_0010	cloud	direct	high	909	1.0	GCA_007990545.2_01939
GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	genomad	CDS	2078466	2078618	GCA_007990545.2	AP019829.2	GCA_007990545.2|AP019829.2	GCA_007990545.2_AP019829.2	GCA_007990545.2|AP019829.2|provirus_2072306_2081737_1934	153	1	0.301	11	AGxAGG/AGGxGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	GCA_007990545.2|AP019829.2	1934	11	6161	6313	MNSNERAKVIIEGFKKLTLEQMEQMLIKLGIPTDRKIGSDENGGKEYAKR	GCA_007990545.2|AP019829.2|provirus_2072306_2081737	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad_CDS_0011	cloud	direct	high	153	1.0	GCA_007990545.2_01940
GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	genomad	CDS	2078590	2078790	GCA_007990545.2	AP019829.2	GCA_007990545.2|AP019829.2	GCA_007990545.2_AP019829.2	GCA_007990545.2|AP019829.2|provirus_2072306_2081737_1935	201	1	0.323	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	GCA_007990545.2|AP019829.2	1935	12	6285	6485	MVEKNMQSVKRSVKRIMDHKNYNEDIQAVLDKLNEEIDDYRLYERHLRSVYELMELGIRITVAAYN	GCA_007990545.2|AP019829.2|provirus_2072306_2081737	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad_CDS_0012	cloud	direct	high	201	1.0	GCA_007990545.2_01941
GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	genomad	CDS	2078813	2078995	GCA_007990545.2	AP019829.2	GCA_007990545.2|AP019829.2	GCA_007990545.2_AP019829.2	GCA_007990545.2|AP019829.2|provirus_2072306_2081737_1936	183	1	0.317	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	GCA_007990545.2|AP019829.2	1936	13	6508	6690	MIEFEILKEVTLAINQDREKKKAEKIKEWKARANNVSEYICSLPISHSQRNQLVDKIPIY	GCA_007990545.2|AP019829.2|provirus_2072306_2081737	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad_CDS_0013	cloud	direct	high	183	1.0	GCA_007990545.2_01942
GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	genomad	CDS	2079123	2079275	GCA_007990545.2	AP019829.2	GCA_007990545.2|AP019829.2	GCA_007990545.2_AP019829.2	GCA_007990545.2|AP019829.2|provirus_2072306_2081737_1937	153	1	0.327	11	None	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	GCA_007990545.2|AP019829.2	1937	14	6818	6970	MKEVHCKHCGAFLFGIESDCKYYVTKCKKCGVINRGSTSQVFKPKKKNEK	GCA_007990545.2|AP019829.2|provirus_2072306_2081737	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad_CDS_0014	.	unmatched_CDS	none	0	0	.
GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	genomad	CDS	2079798	2080550	GCA_007990545.2	AP019829.2	GCA_007990545.2|AP019829.2	GCA_007990545.2_AP019829.2	GCA_007990545.2|AP019829.2|provirus_2072306_2081737_1938	753	1	0.305	11	AGGA	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	GCA_007990545.2|AP019829.2	1938	15	7493	8245	MEKKGNYPKRYRYTEAETDRIIEILEIIEEYRKTNEVDEIMECINNELLYGSGEINYVTRCKRQTCPLCRENRKYKTYLKLKEKVAKQNGIRYILMTFNGREIGDLTKLSDEVGENNSIVARIVRKKSIQAIMLGYIKIVEISYNKYSKRLLPHVHLLLAVKEDFKEHWIRKKEIDKLEKTWKKWKKETITNAIDVKIVKDTEKDIDTVLKYITIVNKKRIMNLNDMEIRAFFEMINERKRLFTTSGIFK	GCA_007990545.2|AP019829.2|provirus_2072306_2081737	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad_CDS_0015	cloud	direct	high	753	1.0	GCA_007990545.2_01943
GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	genomad	CDS	2080667	2081737	GCA_007990545.2	AP019829.2	GCA_007990545.2|AP019829.2	GCA_007990545.2_AP019829.2	GCA_007990545.2|AP019829.2|provirus_2072306_2081737_1939	1071	1	0.345	11	None	GENOMAD.006149.VV	8.155e-16	82	0	0	0	1246	Caudoviricetes	NA	NA	PF00589;TIGR02249;COG4974	integron integrase	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad	GCA_007990545.2|AP019829.2	1939	16	8362	9432	MKRKKKANRQGSVTKTKKNKPYWVRVTDPATGKRKSLGMYATRTEAQEILNNYLVNPYEIDNSKIIFSELYKLFISNQREMVKKATLDSYKNSYKRCEPLHSLVFREIKGPQMQQAINNLNTSSATKQITKNFLTTLFNYGMELEIITVNRAKYIKIPKESVQKEKNIFSSYEIQKLWNNISTQWVDYILIMIYTGMRIGELAGLKKENVDLLQGFINGGNKTEKGKHRQIPIHKDIFQLIKGLYEKSPTDYLLYNQNWVFKKKEKENKPLRINFFREHFYKTLESLGMNHKPHDCRKTLSTLMSRQQLTTTAITNILGHENIETTNKFYIKTDKENLKAEMNNIKFYSDESNMTN	GCA_007990545.2|AP019829.2|provirus_2072306_2081737	GCA_007990545.2|AP019829.2@region_2072306_2081737@tool_genomad_CDS_0016	cloud	direct	high	1071	1.0	GCA_007990545.2_01944