core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote	cenote	CDS	208	474	GCA_008085085.1	VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085.1_VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085_1_13	GCA_008085085_1_13	209	475	GCA_008085085_1_13_1	GCA_008085085_1_13_1	+	6747	.	.	hypothetical protein	MSDLTIKYITPKYFYELVKLLKTIKYSVEITDNSLSIRFDTQRDLCVELFDVWQLLKEFEYSSVPVDLEDFLKTYSPVYRYGKRYFRR*	.	hypothetical_protein	NaN	.	0	6747	GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote_CDS_0001	shell	ambiguous	low	3	0.011	GCA_008085085.1_01178
GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote	cenote	CDS	471	719	GCA_008085085.1	VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085.1_VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085_1_13	GCA_008085085_1_13	472	720	GCA_008085085_1_13_2	GCA_008085085_1_13_2	-	6747	.	.	hypothetical protein	MKKIILTLSTIIFTAGFRYDGLREYGAFKYEESPFTQQRTEQFEEHVSKKIVEDFKKPGPKAKIERIGKQEKSDIRKLKGRN*	.	hypothetical_protein	NaN	.	0	6747	GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote_CDS_0002	shell	direct	high	248	0.996	GCA_008085085.1_01178
GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote	cenote	CDS	798	1076	GCA_008085085.1	VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085.1_VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085_1_13	GCA_008085085_1_13	799	1077	GCA_008085085_1_13_3	GCA_008085085_1_13_3	-	6747	.	.	hypothetical protein	MYIVKFVYKKYDVNHIFKRKVLMNKSISDKTVRLKKQEAIELKDLSFELTKKAIGAGHQKIYKESDIVHFLIENLAQKVTINKNGDLEIELS*	.	hypothetical_protein	NaN	.	0	6747	GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote_CDS_0003	shell	direct	moderate	213	0.763	GCA_008085085.1_01179
GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote	cenote	CDS	1143	2288	GCA_008085085.1	VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085.1_VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085_1_13	GCA_008085085_1_13	1144	2289	GCA_008085085_1_13_4	GCA_008085085_1_13_4	+	6747	.	PFAM:PF05144.13	Phage-replication-protein	MNYHIDWLTIEQDFGYQIPDSVVSSIFNFGMVGIHLDTGEMQEGVRTPIYRHRGSYCDEVSIRVSGSVVRVDGNPSRWGKVENLLGFTDIDACVCCFNNILFNLGLPTFSRCTEIFYLNGKDGEKVKKTSNGAIIKRLDITTNKSVGSGNERTFIKALSQMRYRNSIGRLHTNGLTADWLSDKGNANLIYPSCYIKHEEMKLHSYEKIKNKFGIDSNEFQYYDRVFNYCRENGVVRFEQKLKSRYLQRENLCYWGLSDFSKLEKLQEEFCGMYKKLSVNKIELETIAEQLISQGVVDSLRKANTTAFYAMRWASGDDLSDLSIATFKRHRANLRKIGIDIANPCDTEKFQAVQVISCEQIIVRPFKAPDFYQYPSNLRFVA*	rep_hall_hmm	common_virus	NaN	.	0	6747	GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote_CDS_0004	shell	direct	high	1145	0.999	GCA_008085085.1_01180
GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote	cenote	CDS	2309	2638	GCA_008085085.1	VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085.1_VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085_1_13	GCA_008085085_1_13	2310	2639	GCA_008085085_1_13_5	GCA_008085085_1_13_5	+	6747	.	pfam17426	Putative Gamma DNA binding protein G5P. This domain family is found in Gammaproteobacterial proteins. Members of the family are predicted to be G5P DNA binding proteins. Homologous proteins are found in pfam02303	MRTGFYIVGKLLGQRANSFTNRETGEVRERHTLGIQLKEPDGFGGYNTLTQELKIDERSVNQALNATVERLKGKFVMVLVYPREWAMEGGRKGITYNFDENSTIEEVKE*	mmseqs_cdd	nonviral_gene	NaN	.	0	6747	GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote_CDS_0005	shell	direct	high	329	0.997	GCA_008085085.1_01181
GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote	cenote	CDS	2849	3094	GCA_008085085.1	VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085.1_VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085_1_13	GCA_008085085_1_13	2850	3095	GCA_008085085_1_13_6	GCA_008085085_1_13_6	+	6747	.	.	hypothetical protein	MSEQTLIRINAQLCVSDRGCSDVNLNMTQAEAFKIYQLAPSSKGEKVDYSQYKEFWAVSFSATLSLWLIAYFVGRLLKFLK*	.	hypothetical_protein	NaN	.	0	6747	GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote_CDS_0006	.	unmatched_CDS	none	0	0	.
GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote	cenote	CDS	3116	3337	GCA_008085085.1	VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085.1_VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085_1_13	GCA_008085085_1_13	3117	3338	GCA_008085085_1_13_7	GCA_008085085_1_13_7	+	6747	.	PFAM:PF10389.8	virion-structural-protein	MLKTFKKVAGYATALTLTAFASVSSYAAGIGDIATQVDMTQPKEAVIALGVALGGFLVVGLAVRYLLGFFKRA*	phrogs_hmm	hypothetical_protein	NaN	.	0	6747	GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote_CDS_0007	shell	direct	high	221	0.995	GCA_008085085.1_01182
GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote	cenote	CDS	3446	4615	GCA_008085085.1	VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085.1_VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085_1_13	GCA_008085085_1_13	3447	4616	GCA_008085085_1_13_8	GCA_008085085_1_13_8	+	6747	.	.	hypothetical protein	MGYVMCLRGRSRYFRLVLACFLFCFSAYSLAVPACYSRSTIQKGSKPQNSPNALKTSCKLISYGSGYKKCRQPDGDEDLTTIESDDTGLTIHHGKSQDNFFHDGWWTWDEQFSFGSNLKAVYRNALLPSLIKALKNDNCDIANAILDAMQNPNIVKNGDSEFLGFKNGDDKCAVLPDGKTLCKGPSYRLSKTKDGETRLHVDPNNPEWSKSLDDYAGTKQSENNNNPGTPGDNKGDGSGIHQHRGNGSSPDKKGEAEHGNNKPGQKGGDKKGDKPGNGGNGGSGVGNGKGDNDGDGDGDGKDLKDIDKPNLQTPDLERTLRAAKKGLDDRVGSGYELSAGQCEPITVPVFNRTQTIDVHCKIIDKMGATVSPVFTLLWSSLALIIILSA*	.	hypothetical_protein	NaN	.	0	6747	GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote_CDS_0008	shell	direct	moderate	1157	0.989	GCA_008085085.1_01183
GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote	cenote	CDS	4623	4928	GCA_008085085.1	VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085.1_VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085_1_13	GCA_008085085_1_13	4624	4929	GCA_008085085_1_13_9	GCA_008085085_1_13_9	+	6747	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MVKLIIGWIAKNSGGLLKWLFDSVVLKFIVFSLIYLCIQEVVPLLLDIFVGDKFDEIKQLLGQVPENVAYILKMFRVDFAFKVVLSAYLMRFVIRRIPIIG*	hallmark_hmm	common_virus	NaN	.	0	6747	GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote_CDS_0009	shell	direct	high	305	0.997	GCA_008085085.1_01184
GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote	cenote	CDS	4936	6066	GCA_008085085.1	VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085.1_VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085_1_13	GCA_008085085_1_13	4937	6067	GCA_008085085_1_13_10	GCA_008085085_1_13_10	+	6747	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MAISAYVGIPGSGKSYEVVSSVIVENYLKGRRIVTNIEGITDEKVREYCLNKKNAKEDDLGQLIRVSDEDCQRDDFFPYKGSDDNTICKSGDLICIDEVWRIFPTNEIKSNHRSFIAEHRHFTDEETGVCCDLVVINQSVTGIPRFIKDRIETTFLMSRLVSLGLGKRYRVNVYTGVKCNKQGLVAQYQNKYNEDIFKLYKSFDGVNGKQSVVDDRQNFFKSGTFRLMVIFVIGAFSYSFYALKPYIYPDVQDEQAQHQTKNDGTHNQSFINQGPQDVKGAKHIKDNEFADLYEAMTTGDDLKIQQKELLSEKWKITGELSKNGQLFVVLMDTKNNLRLEPRRFFNGEGRELKGVIGGEVVSYYSGVLKNENVFKQ*	hallmark_hmm	common_virus	NaN	.	0	6747	GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote_CDS_0010	shell	direct	high	1130	0.999	GCA_008085085.1_01185
GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote	cenote	CDS	6044	6745	GCA_008085085.1	VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085.1_VSDW01000020.1	GCA_008085085.1|VSDW01000020.1	GCA_008085085_1_13	GCA_008085085_1_13	6045	6746	GCA_008085085_1_13_11	GCA_008085085_1_13_11	+	6747	.	PDB:5WQ8_J	Type-II-secretion-system-protein	MKMFLSNSIKNLLGVLGFLPCFCGAVNVDFKLDAVQLPKAVSMIYGDVLEKPYMLDPQLANDERLISFKVTEKQDFEQFIVRYFGNMNIKTYEKNGVVYIAKIEPKVVRQSFVYSPVYRDVEYLAEFLKHNNNDEKAVSASGDKLVYYGTGEEIARVKSVLKGVDVPGREIVVTGYVFEVQTEEKEGSGINLLAKLLSGKLGINIGVKQNYENFITVNTGNLDAMIELFRTDSR	common_virus_hmm	common_virus	NaN	.	0	6747	GCA_008085085.1|VSDW01000020.1@region_1_6747@tool_cenote_CDS_0011	shell	ambiguous	low	24	0.034	GCA_008085085.1_01185
GCA_008085085.1|VSDW01000004.1@region_177507_182176@tool_cenote	cenote	CDS	177506	177922	GCA_008085085.1	VSDW01000004.1	GCA_008085085.1|VSDW01000004.1	GCA_008085085.1_VSDW01000004.1	GCA_008085085.1|VSDW01000004.1	GCA_008085085_1_19	GCA_008085085_1_19@C7	1	417	GCA_008085085_1_19_166	GCA_008085085_1_19_166	+	182175	.	COG3111	Predicted periplasmic protein YdeI with OB-fold, BOF family [Function unknown]. 	MKKRSLATILVLSTIAATGVFAQGGFQDPNAPKMEHHKKGDFKRGGFVNTDQTVSKASEAGSWQDDQYIILQGNIVKQVGKDDFIFKDASGEIQVEIERKAWRGQDVSPSDEVKLYGEVDKSWNKTEVDIERVEKIVK*	mmseqs_cdd	nonviral_gene	C7	4670.0	177506	182176	GCA_008085085.1|VSDW01000004.1@region_177507_182176@tool_cenote_CDS_0001	persistent	direct	high	416	0.998	GCA_008085085.1_01583
GCA_008085085.1|VSDW01000004.1@region_177507_182176@tool_cenote	cenote	CDS	178056	178388	GCA_008085085.1	VSDW01000004.1	GCA_008085085.1|VSDW01000004.1	GCA_008085085.1_VSDW01000004.1	GCA_008085085.1|VSDW01000004.1	GCA_008085085_1_19	GCA_008085085_1_19@C7	551	883	GCA_008085085_1_19_167	GCA_008085085_1_19_167	+	182175	.	PFAM:PF05100.11	Minor-tail-protein	MVAGLTISAMDGASITVNLPANLPQGWFNAGFIEWQDDGVREVRAVTVHQNNKLTLMGGTQKLSIGTVIKVYPGCDGRAQTCLKKFNNMLNFGGIPHMPTKSPYDGSRVF*	hallmark_hmm	common_virus	C7	4670.0	177506	182176	GCA_008085085.1|VSDW01000004.1@region_177507_182176@tool_cenote_CDS_0002	shell	direct	high	332	0.997	GCA_008085085.1_01584
GCA_008085085.1|VSDW01000004.1@region_177507_182176@tool_cenote	cenote	CDS	178401	178646	GCA_008085085.1	VSDW01000004.1	GCA_008085085.1|VSDW01000004.1	GCA_008085085.1_VSDW01000004.1	GCA_008085085.1|VSDW01000004.1	GCA_008085085_1_19	GCA_008085085_1_19@C7	896	1141	GCA_008085085_1_19_168	GCA_008085085_1_19_168	+	182175	.	.	hypothetical protein	MFASIAWAIVKIVAYAVASYYINRAFGKRGSNGPEAASAKDFNFPQIDEGTPQCVFFGDCWTEDWQVLAYGNYRTSEIKKG*	.	hypothetical_protein	C7	4670.0	177506	182176	GCA_008085085.1|VSDW01000004.1@region_177507_182176@tool_cenote_CDS_0003	shell	direct	high	245	0.996	GCA_008085085.1_01585
GCA_008085085.1|VSDW01000004.1@region_177507_182176@tool_cenote	cenote	CDS	178650	178856	GCA_008085085.1	VSDW01000004.1	GCA_008085085.1|VSDW01000004.1	GCA_008085085.1_VSDW01000004.1	GCA_008085085.1|VSDW01000004.1	GCA_008085085_1_19	GCA_008085085_1_19@C7	1145	1351	GCA_008085085_1_19_169	GCA_008085085_1_19_169	+	182175	.	.	hypothetical protein	MDSIIITMQDMRRVDFCPYGVEAFFMREGLDYADFLQHGIDSRVLLNTGSVFARKCVAAALEANEGDK*	.	hypothetical_protein	C7	4670.0	177506	182176	GCA_008085085.1|VSDW01000004.1@region_177507_182176@tool_cenote_CDS_0004	shell	direct	high	206	0.995	GCA_008085085.1_01586
GCA_008085085.1|VSDW01000004.1@region_177507_182176@tool_cenote	cenote	CDS	178856	181636	GCA_008085085.1	VSDW01000004.1	GCA_008085085.1|VSDW01000004.1	GCA_008085085.1_VSDW01000004.1	GCA_008085085.1|VSDW01000004.1	GCA_008085085_1_19	GCA_008085085_1_19@C7	1351	4131	GCA_008085085_1_19_170	GCA_008085085_1_19_170	+	182175	.	PFAM:PF13550.5	Putative-phage-tail-protein	MGGKKGKSVTVGYRYYWDIQSGLGRGPVDEIVELRVDDKTAYVGKPGELTHSQAIYVDKPNLFGGDNTGGEGGIQGRMEILMGEPDQKPTQMLINLLKGVYNPSAANNQTGRGRKRFKKDGQHNKFFRPGNVSPGNVATDETIPGFRGIVTTVFSGLISCYNAYPKKHSYRVRRAHKGWHNGVVWYAEKAKILLRNDNLKIKGLTAEQEQNVRQIHAMNPAHILVECATNKSWGGKKDLSELDLDSYKKAADTLFDEGFGLCIRYNRQTSIKDFIKQIVDHIGAAQYDNVETGKQAIKLIRQDYNVADLPLFSYDKGIVAVLDDDSAATDKQANQVIVKYREPVTNREDQAIANNIAAVQMHGVISKTVEYKGVPTFDLAARLAQRDLEMIASGLTRLKITFDMRDSELRPGDVIRVNLPDRDIVDVVFRVGELKNGNEGEIVATCLQDVYGMPAANYSTQKGESLYVPPDYTAKPIDSARLFEVPYHVLPLVLSDAERAFIKPTDCFVWSLGAQPTALSVGYDLIVDAGAGFEHATEGSFTPSVVLDEDIAPYQTQVRFVTDGDYSGLSGAEALMIDDEIVKIDSVNFTKSILTIGRGCADTIPQSHKRGARAWCYLIAAGTNETKYTVNEKIKAKLLTRTQQETLSEDKAQELVIVTRKRQARPYPPGKVQADGIYSDTIADGSKFKLTWAHRDRDIQADKLIAHTEDSTILGDGVSYQIALLDGSNIVRTITTTDTEFLYPDEAKKEGEQFNRITLSAVKNGLSSLFNYQFNVAGAMQLLYDWDYKAKFTQGDNYLNRYDDGYFGGLPYFMLSSSLSPTSELYRDFAVTPGEFGRFALNYKILSYSQRRGKCKVIVQLLNSDNLVKSIDSGLLGDYPTDDWHPQQVTDILPPQVTSIRFKIVVQDSIANNALAFRDITIRVGK*	hallmark_hmm	common_virus	C7	4670.0	177506	182176	GCA_008085085.1|VSDW01000004.1@region_177507_182176@tool_cenote_CDS_0005	shell	direct	high	2780	1.0	GCA_008085085.1_01587
GCA_008085085.1|VSDW01000004.1@region_177507_182176@tool_cenote	cenote	CDS	181811	182173	GCA_008085085.1	VSDW01000004.1	GCA_008085085.1|VSDW01000004.1	GCA_008085085.1_VSDW01000004.1	GCA_008085085.1|VSDW01000004.1	GCA_008085085_1_19	GCA_008085085_1_19@C7	4306	4668	GCA_008085085_1_19_171	GCA_008085085_1_19_171	+	182175	.	PFAM:PF00145.16	DNA-methyltransferase	MKNNLSSYKQAPLPFIGQKQQFLTHYTTILNQHIQDEGKGWTIIDAFGGSGLLSHTAKQLKPAARVIYNDFDDYVMRLKHIDDINRLRGKIYTLLDGVPRQKRITDHLLKTKIIKVIETFD	phrogs_hmm	hypothetical_protein	C7	4670.0	177506	182176	GCA_008085085.1|VSDW01000004.1@region_177507_182176@tool_cenote_CDS_0006	.	unmatched_CDS	none	0	0	.