core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	113522	114172	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	1	651	GCA_008373895_1_45_111	GCA_008373895_1_45_111	-	184823	.	COG2258	Uncharacterized conserved protein YiiM, contains MOSC domain [Function unknown]. 	MKVISTNVAVRRPEPHGRHEYTGIDKQPRPFLDLEIPGPNYGDGSGVVGDSIGDHAHHGGAEKAVYAYAREELDYWEGTLNRVLRGGYFGENLTTEGISWPNMLINQQIQVGESVLEVSIPRTPCATFSGWMDEPGWLKSFTERGDCGSYLRIIEPGRITSGDEITLIGRPDHDITMGMAFAAKMGDKELARRVVDAGCLAAVHHDQLVKRLQPRG*	mmseqs_cdd	nonviral_gene	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0001	persistent	direct	high	650	0.998	GCA_008373895.1_02021
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	114202	116742	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	681	3221	GCA_008373895_1_45_112	GCA_008373895_1_45_112	-	184823	.	.	hypothetical protein	MMKQMSAEIYSLPTTPLVTTDLTEQGPRISLRRGSNILMLELPATYPEADLSDPRWVVKSHFIDRPHSVRELATEEPLEVGIPGPFTRIEVTLRDGDEDLIETVTFTGITDEAPFIVYDRTTLIAPQGTLEAAEPLGIWAGWEVGPLPDQVRVPQREPVDVAKHGDFEWDFDVAILPIARGLDNEPVFTKSPRVHLIAEGEWRIDLTYAPLGGEQEEISEQTFDAGIAEPFPGDLYEDPWVGRYKVSLWHDEQLVDVRFISLAEGLHMRATNDGPRGMDFRIIDALGAHSAFSYTLASPPKKPIALEKGLRTFEDTEVSRREVVASEAGYELEFDVWPEALFSRVKRIGLEPTEHSDKPVIFAGQLDQDDMFTVHSPRPLPLAKFVTIDGRQKIKELARTSRTTQAVTSLAVPNAALANAVRKQPTAELFLMWSTLSYEDYLDSLPAGEREAHQARSLERRIVEYEASASTSLIYAALATVRKSPFVSRGLLNGDEIIIEQNAEPQADLVGWAWPLAEPTVTPTQLTPTEEGFELPADLAEQGSLLVDVRELRASSNLAAPARPSSASIVITPEGSPAALASKDWTPEQLWDTFRALHVLSQRSPNPKLQAMFDSTIDRLRAQPEAAVHALARTGVSVNQQARSLARTRLFHSPLEAAAESGVDSYLDLLLDPSASENPELTAVRESGADGLTRPMLLNAATIHSPTPPVDDLMGEAGRVAALRECFANNGALDALGTIEHLRKDATALASLVQNAGVDMSVSHTLIALGAFASGNTADELNAAAWMPYISYAFALASRAAANDIIMESPLLKEDMPMLADVLPLAPRLFFYDLVTAEALFRDRDM*	.	hypothetical_protein	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0002	persistent	direct	high	2540	1.0	GCA_008373895.1_02022
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	116984	117562	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	3463	4041	GCA_008373895_1_45_113	GCA_008373895_1_45_113	+	184823	.	.	hypothetical protein	MRVLGYEVSVSVHRMSDAAAATAARVLLGELASEEPDVKAWIDRFVQWGDAPAGGGSYRALMERAAWASNPYGRQGALHFLPANPITLASAVDASGQPWAMSGAFAAQQVSGQIAGEVEPRSTLIWCTNPADIVPSLPTRIRASAEPVSGGITLVPVAGEEFTGATNEAGIHYVSPHQLAIDVCAENYIGGA*	.	hypothetical_protein	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0003	shell	direct	high	579	1.0	GCA_008373895.1_02023
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	117566	118135	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	4045	4614	GCA_008373895_1_45_114	GCA_008373895_1_45_114	+	184823	.	5JJ6_B	Adenosine monophosphate-protein transferase FICD homolog	MRRATSRVSWEHHERPHVSELGTDRALFRLAKQLPDLVWNAVALEGNTFTLPEVRTLLDAGLFRGEGDAEGDGGGVRLMDGGFIPFDPADELGEAHADLLVSLQGLENPVEQALAYFCSATRSQFYFDGNKRTARLVASGLLLSHGYSALNIPHARQLEFNLALDELFRADDATALMDFLYDCLEESSQ*	hhsuite_tools	hypothetical_protein	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0004	shell	direct	high	569	0.998	GCA_008373895.1_02024
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	118575	119183	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	5054	5662	GCA_008373895_1_45_115	GCA_008373895_1_45_115	-	184823	.	NF038094	CueP family metal-binding protein. Members of this family including CueP itself, a copper-binding periplasmic metallochaperone, as found in Salmonella enterica serovar Typhimurium. Many family members, although not CueP itself, are lipoproteins. Several other members of the family are selenoproteins, including members from Bacillus selenitireducens, Bacillus beveridgei, and others.	MKRLISLAAVCAAAITLSACSTESPGPSEASKSAASSTDIQQVPAEEILAEFDLEGLDGPEIIDKLDHMPKEERPSDLHASVLPNELVLTAEQGQASLPLPEDKFYVSIAPYMTQTHDCFNHSLTTCTGELSKEDIHVTITDDEGNELVNEDTTTFDNGFIGYWLPADKKGTITVEKDGKTGEVPLDTTEEGATCITTLQMT*	mmseqs_cdd	nonviral_gene	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0005	persistent	direct	high	608	0.998	GCA_008373895.1_02025
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	119338	119943	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	5817	6422	GCA_008373895_1_45_116	GCA_008373895_1_45_116	+	184823	.	COG0286	Type I restriction-modification system, DNA methylase subunit [Defense mechanisms]. 	MITGALKNNVDRIWDTFWSGGISNPVSVIEQFTYLLFIKDLDERQVQIDKRRALGDPTATEDIFDASQQDLRWRNLIEDRDIARRKATIITKVFPFIKEMGGTGFQEHMANASFEIESEATLSRVMELIDQLHFSNKDMKGDLYEYMLDKLSTSGTNGQFRTPSHIIELIVALMEPTPQQRIIETFMPRWIQKRADYDLAA*	mmseqs_cdd	nonviral_gene	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0006	persistent	direct	high	606	1.0	GCA_008373895.1_02026
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	119969	120481	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	6448	6960	GCA_008373895_1_45_117	GCA_008373895_1_45_117	-	184823	.	.	hypothetical protein	MSKRPPEPGGRSRSLGVVDRLQLKILQQVEDYVTPFQVVEGFDDRWWHRMAGRVGDDTLGGKEYIQFLADSVEVGRAEVTDWPLSDSYIGVDSTVPTKEIWFFEIRHDLRRQHYGGEFARHLVSHYAGYPLIAFSEGADEFWAGIGWHYYPRKDGDPHYRKLFVSQKIGK*	.	hypothetical_protein	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0007	shell	direct	high	512	0.998	GCA_008373895.1_02027
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	120492	122078	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	6971	8557	GCA_008373895_1_45_118	GCA_008373895_1_45_118	-	184823	.	PDB:4BQQ_A	Integrase	MARTVTAIPATRALHTGAPLGQTTLRRVAGYARVSTDHDDQVTSYEAQVDYYTRYISDHAGWQFVKVYTDEGITGTSTKHRAGFQQMVTDALDGKIDLIITKSVSRFARNTVDSLTTVRALKDKGVEVFFEKEGIWTFDTKGELLITIMSSLAQEEARSISENVTWGHRKRFADGKVTVPYSRFLGYDKGEDGNLLVNPEQAKLVRRIYGMYLEGHSIRHIAHTLTDEPATYTAAGNKTWHYQSVRSILTNEKYKGDALLQKSYTADFLTKKQVINEGEVPQYYVTGNHEAIISPAVWDFVQAEIAKGARDQRTQHRTRPFSSTLICGQCGHFFGSKTWHASSKYEKVIWRCGHKYSGQEKCATGHISDQRLKDMLLKAIRLRFGSPTDTGVNQAVLDALDTSDLEVEAAGLLAQINEVAKKLQSMIARNARVAQDQQVYEKAFNASHEQHQTLLAEHAAVVAEIQNKNNRLAAYHYYRQETANLDLEQLAFSPYLCVALLDKGVVDVDGNVTFQFRDGSTQVVAIKQ*	common_virus_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0008	shell	direct	high	1586	0.999	GCA_008373895.1_02028
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	122079	123569	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	8558	10048	GCA_008373895_1_45_119	GCA_008373895_1_45_119	-	184823	.	PDB:4BQQ_A	Integrase	MYGYNLKPCLTRRNTLKRMEQITPPPISTSPLVKVAAYARISMETERTPLSLSTQVSYYQQLIHDTPGWTFAGVFADSGISGTTTHRPQFQEMLALARKGAIDLILTKSISRFARNTVDLLETVRELKDLGVEVRFEKENISSTSADGELMLTLLASFAQAESEQISQNVKWRIWKGFEEGKANGFHLYGYTDSADGTDVQIIEEEAAVVRWIFDQYMKKISCEKMAAQLIADGRVPHLADNKLPGEWVRHILKNPHYTGDLLLGRWSTPEGKPGRAVRNTGQLPQYLVENAIPAIIDRDTFVAVQTEITRRRELGARANWSIETVALTSKIKCVSCDCSFVRNVRNPKTQNSISTEHWICTERKKGRKTGCGTCEISDTALKGFIARVLGIEAFDEDVFTERIDHIDVQGKDRYTFHYTDGTSSSHTWRPNLKKSSWTPVRKVAWGELVRARWAEAKRLGLDNPRQAPTPPEALAKYRAVAKAEAERLRAERGER*	common_virus_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0009	shell	direct	high	1490	0.999	GCA_008373895.1_02029
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	123535	123750	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	10014	10229	GCA_008373895_1_45_120	GCA_008373895_1_45_120	-	184823	.	.	hypothetical protein	MNMAAELTAHHQLTQVKQLLERGILTPREAITVCQRLDAPDAPLAALQRASFVDYLEGLSDVWIQPETLSD*	.	hypothetical_protein	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0010	shell	direct	high	215	0.995	GCA_008373895.1_02030
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	123747	124157	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	10226	10636	GCA_008373895_1_45_121	GCA_008373895_1_45_121	-	184823	.	PFAM:PF05766.11	HNH-endonuclease	MALNQTDRHHIQMMRAAGVAYSRIAAHLDLNANSVKTYCLRHGITVDPAVEQVTDPVGVWCLHCCKPIELRQGSKFCSTACRRAWWATHRRVVTEELVCANCHRQVTVTRTSQVKRKYCCHPCYVQHRFNTRGGKR*	phrogs_hmm	hypothetical_protein	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0011	shell	direct	high	410	0.998	GCA_008373895.1_02031
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	124369	124557	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	10848	11036	GCA_008373895_1_45_122	GCA_008373895_1_45_122	+	184823	.	.	hypothetical protein	MTDDDGELPVFLDDQSYRTCSECTSVCVPDPFIAGEGQGIKVAFICPSCGVQSVIDPFEDTR*	.	hypothetical_protein	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0012	cloud	direct	high	188	0.995	GCA_008373895.1_02032
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	124641	125483	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	11120	11962	GCA_008373895_1_45_123	GCA_008373895_1_45_123	-	184823	.	PDB:2L47_A	N-acetylmuramoyl-L-alanine-amidase-endolysin	MKNWATLEADENRLMNKHYSAGRSGRKINKVIIHHNAGNLTIKSIWDVWQTRQASAHYQVDSNGRIGQLVWDRDTAWHAGNWDANTTSIGIEHADISSKPWRISEACLDNGAHLVAAICHYYKLGRPVWAKNVFGHKHFSSTECPASLAGSQHAAYMARAQYWYDRMSGTKPAPTPPAKPTPPAPKPSANIDALADAVIRGEYGNGEERKRRLGANYAAVQKRVNEKLTGGNPTKPSVNIDALADAVIRGDYGNGEERKRRLGANYAAVQKRVNEKLGIS*	common_virus_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0013	shell	direct	high	842	0.999	GCA_008373895.1_02033
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	125483	125953	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	11962	12432	GCA_008373895_1_45_124	GCA_008373895_1_45_124	-	184823	.	PFAM:PF05105.11	Bacteriophage-holin	MSLKAIWATIQTGLAGVGAVIGAFLGGLDGLVYALIAFVVFDYITGVLAAIAERRVSSSIGFRGISRKVVIFTLIGLAHLLDVHVIGTPGALRTATVVFYLSNEGISLIENATRLGLPVPDQMRRALDLVTRDVTGKPDLEHHPSQTTTPAEKENL*	common_virus_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0014	shell	direct	high	470	0.998	GCA_008373895.1_02034
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	126046	126243	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	12525	12722	GCA_008373895_1_45_125	GCA_008373895_1_45_125	-	184823	.	.	hypothetical protein	MSEKTSAEAVDGEEVVIHPIEPAQPDPVPVPPTENSPEHVEEVGPSTGSLDLTDTVLDVLTSPNL*	.	hypothetical_protein	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0015	shell	direct	high	197	0.995	GCA_008373895.1_02035
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	126236	126697	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	12715	13176	GCA_008373895_1_45_126	GCA_008373895_1_45_126	-	184823	.	PF07761.12	Protein of unknown function (DUF1617)	MRVLIANRHLGPIHDLLETMSLKPAQSRARSKLLELVKNAQLRFGQDEYDLVTTHAILDEEGKPVISEDGTFQLAGGTDLAEFLTLREQLLDSVAEVDGPTYATHLTDIAQLLADYDEPLAGEQAEAYNVLFDAVEAAQHDAVRTAEVDDTDE*	hhsuite_tools	hypothetical_protein	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0016	shell	direct	high	461	0.998	GCA_008373895.1_02036
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	126713	129628	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	13192	16107	GCA_008373895_1_45_127	GCA_008373895_1_45_127	-	184823	.	PDB:3GS9_A	tail-protein	MLTVHAPTATTFTATGEGVLDPELIDARVIEELGGAYQLTVTYPADGPLASKLAVEAIIAAPVPGTTIRQGFRIHEVTTSLDGLLEVTAFHLFYDLAGNFIADTFVVNKTPKAALDQLLRSATTKHRFTATSSDTATRASARVVRMNLAAAIMNQGSDNTFASRWAGELTRDNWHIHHAATRGADRGVVIRDRKNLTGYTSTIDLTSVVTRIVPVGFDGITLPELYVDSPHVDHYAIPHIKVMRYPDIKAIADAENPREDEVPLPQAHALLRQAARAEYATNHIDTPAASYTVSFVDLASTTEYADLAELETVLLGDTVTVQHADLGVSLSARVVGYEYDPLRQTYISVELGSVAGKFTSITRTITTAQTAAQMAADLAGVALASADGKSTNHYGPTQPAAARLGDTWFKDNGESIEIWIYQVTDTGKPGWVTLATDLNHAQVSAELAEARAEVEAAKTAADDAQAAAAAVGARLTEAEAEIGQAREAASQAEATARQAEAVAGEAGVKVAGIESSVSQARHRADTAYETARQVQTSSEARFTELANADNSLASSLSMMASDLNLRVRSGEIISQINISPETILIDGKRIHITGRTSIDNATITTAMIANAAITDAKIANLSAAKITTGTLSAGRIAAGSITSDKLTIADGFIKTAMIANAAITDAKIGSLSASKITTGTLSAGRIAAGSITSDKLTIANGFIKTAMIAEAAITSAKIAALDAGKITTGTLNAARIGAKSITADKLATNAIQVGLAGWTSSIRITPTQISWYSGSSLEGTITSSGLRFWYGTRYIGEMARRAKKDATDIQGIVNQLAYRGDYVAWTYQTTSTGDYFTCLTLDPKGKFYGRAGIHLGADLRINGNKVYTSDTRYVMFQDVAFSGKGTYATLSGSSGLARIGFHTYDLLITTNGTFYNMSRAFDRLKDLMTRVNEIIRRLNYGWIVSISGSGSNITWTNYNNTGLSAMSTTLV*	hallmark_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0017	shell	direct	high	2915	1.0	GCA_008373895.1_02037
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	129713	130399	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	16192	16878	GCA_008373895_1_45_128	GCA_008373895_1_45_128	-	184823	.	PDB:2X8K_A	Distal-Tail-Protein	MHGFTLDKTVSSTSLDLRLTGPVDLPVAERVTDDIEVAGRAGTLTRLGGWHDTSITLPLAIKGDLAAYHKATLALTRATTIHLSTQPGAFHKVKHASISPLRTDMSSWGFFEAHLVCEPFSYLDSGLVTHTLTSSGQITNPGLVDAAPIITIKGTGALTLTINGTTYRVQSPAGQITLDSARLVAHVAGRVQTDALTGTFPILTPGVNRVSLSSGISRVEITGNWRNP*	hallmark_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0018	shell	direct	high	686	0.999	GCA_008373895.1_02038
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	130399	133083	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	16878	19562	GCA_008373895_1_45_129	GCA_008373895_1_45_129	-	184823	.	UniProtKB:E2ZNP7_9FIRM	tail-tape-measure-protein	MADSSFGLKIGLEGEREFKRAITDINREMRVLGSEMKLVSSQFDKNDKSTQALASRNQVLTKEIETQKAKIETLKAALENSAASFGENDSRTRNWQIQLNNAGAELNELEKELKANNDALGEFGDEADGAGDDAKDAAKDAGRLEDAVDDLGDEMDDTGDKTSVFGDVLKANLAAEAIVAGVKGIGKAIASIGRGMADALKDGVEYNARMEQYTTSFTTMLGDQAKAQQLVNDLKAQAAKTPFGMGDLAGSMQTLLAFGISLEDAKKHLTHIGDISQGDAQKMESLTLAFAQMSSTGKLTGQDLMQMINAGFNPLEEISRKTGKSIGELKEEMAKGAISADMVADAFASATEEGGRFHGAMEAQSKTFTGQLSTMRDGIDNLKGLLARGLTDALAGTVMPMVNGWIDELTAAFEQGGAPALIGKLGEILQEALAFIAEQLPMVVETGMSILTALLEGIIEVLPSVAETAVMLIVALVEAIIEALPSLLEAALQIITTLVTGIGEALPELIPAAVEMIVALVQGLVDSLPMILEAALQLILGLAQGLLEAIPVLIEALPQIITSIVEFLVGAIPQIIETGIALLTSLVEALPEIITAIVTVLPQIITGIITTLLSALPQLIEAGVKLLTALIGALPQIISTIVAALPQIIAAIVSAIGGAIPQLVMAGVELLTALITNLPQIISTIVAAIPQIITGIVGAVGQGVGQMASAGADLVRGLWEGIQSLAGWLWDQVSNWCSDIWDGITGFFGINSPSKEMAWVGDMLTRGLAGGIEDTGSRAVAAAEDVAADTLAAMSELTGGIDVPITTSLDPVDLTPTHLQPPPVTTSSSAVGQEAGRAGEVAGIVDQTARTLLEAMDIKVVLNDGTLVGKLAPGINRQLARINSHHTVLATGGA*	hallmark_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0019	cloud	direct	high	2684	1.0	GCA_008373895.1_02039
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	133110	133220	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	19589	19699	GCA_008373895_1_45_130	GCA_008373895_1_45_130	-	184823	.	.	hypothetical protein	MVFGELLDLVDCWRIETGRAKPARVWFIDDIIPPGI*	.	hypothetical_protein	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0020	cloud	direct	high	110	0.991	GCA_008373895.1_02040
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	133304	133714	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	19783	20193	GCA_008373895_1_45_131	GCA_008373895_1_45_131	-	184823	.	PFAM:PF12363.7	tail-protein	MTNTSTLDAAARSARVTIGGSEYELVLTTKATRLIAERYGGLDKLGAALETSEDLGQTLTEVIWLITLLANQSVQIHNLTHRDNPRPQLTEDEVELLTVPADIADYRGAIAEALQRGTRRDILTEPAPKASPAADG*	phrogs_hmm	hypothetical_protein	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0021	cloud	direct	high	410	0.998	GCA_008373895.1_02041
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	133727	134323	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	20206	20802	GCA_008373895_1_45_132	GCA_008373895_1_45_132	-	184823	.	PFAM:PF04630.11	tail-tube-protein	MATIGLDKLYYATITENPTTGEETYASPKPLAKAISAELSVEVAEAILYADDGPSEIVKEFKSGTLTLGVDDLGTEAAAALTGAILDANGVLISSSEDGGTPVAIGFRAARSNGTFQYFWLYRVKFALPSTTLATKADSITFSTPSIEGTILRRNKPDAKGRHPWKAEATEGDPKVKAEIITGWYQSVYEPAATSPGK*	hallmark_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0022	cloud	direct	high	596	0.998	GCA_008373895.1_02042
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	134343	134687	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	20822	21166	GCA_008373895_1_45_133	GCA_008373895_1_45_133	-	184823	.	PFAM:PF05657.10	tail-component	MNAPLLETLTEIADRLDLPIAVSLFSASPAPDTYLVATPIADTLEVFADNTPSVDIEEVRLGLFTAGNYLPWRDRITHALVDAGLGVTARRYIGFEDDTGYHHYSFDISCHHPF*	hallmark_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0023	cloud	direct	high	344	0.997	GCA_008373895.1_02043
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	134684	135121	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	21163	21600	GCA_008373895_1_45_134	GCA_008373895_1_45_134	-	184823	.	PFAM:PF04883.11	type-I-neck-protein	MARVQIRLPNKYIDALEATSRLLDTATDEVLTAGANVVEPRMRANLASAIGRATTLPSRSTGQLLGALGVTSVKVNSRGDHNVKVGFAENRRDGRSNALIASVLEHGRSNQPAHPFLAPTRSQTRRGAVEAMKAVLKAKLDGITP*	hallmark_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0024	cloud	direct	high	437	0.998	GCA_008373895.1_02044
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	135093	135452	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	21572	21931	GCA_008373895_1_45_135	GCA_008373895_1_45_135	-	184823	.	CDD:pfam05521	Head-Tail-Connector-protein	MAGIGSMRETIDLITPVARRDAAGFTGSSEQVVATVRAYREIRHASSAWVNRAAYTQATVLFRIRVIPGLTVSEVMQIAAADGRFVIDTVEAIGGYIEILAHRLQPEGAHHGARPDPTA*	hallmark_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0025	cloud	direct	high	359	0.997	GCA_008373895.1_02045
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	135456	135770	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	21935	22249	GCA_008373895_1_45_136	GCA_008373895_1_45_136	-	184823	.	CDD:cd08054	Head-Tail-Connector-Protein	MNQELVGQVKANLILAHDADDELIAHLVAAATSYATAYQHLPGDYYETREMPGSTRQAIVMLASHFYESRDGSTAGFWSDKPDAAKAMWAAVNTLLRLEREWKV*	hallmark_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0026	cloud	direct	high	314	0.997	GCA_008373895.1_02046
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	135805	137025	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	22284	23504	GCA_008373895_1_45_137	GCA_008373895_1_45_137	-	184823	.	PFAM:PF06673.10	Major-Capsid-protein	MSTMTISDLRARRADTWEKAKAFLDERRGTTTGCLSAEDDQTYARMEADIDKLTNEIARAERAQRLDADLARATNAPLTSMPGQTGEESEPKTGRATASYKRAFWDAMRLNASPMEVRNALSEGVDSEGGYLVPDEFEHTLVQSLVEQNIMRGLANVIQTTSGDRKIPVVSTHGSAGWLDEGKPYTESDETFSQVTLSAFKLGTFLKISEELLGDSVFDVEAYLAAEFARRIGAAEEEAFLVGDGKGKPTGIFDATGGGISDVTTAKATDITADELIDLHYSLRAPYRARVVWLMNDATVKTVRKLKDNQGQYLWQPALTAGAPDMILGKPVHTSTFAPEIKAGAKTVAFGDLSYYWIADRQGRSFKRLNELFATSGQVGFLASQRLDGKLVLPEAVKILTQKTGA*	hallmark_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0027	cloud	direct	high	1220	0.999	GCA_008373895.1_02047
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	137047	137874	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	23526	24353	GCA_008373895_1_45_138	GCA_008373895_1_45_138	-	184823	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MRRFWNWEPPAPDIDSPAGSDTSRVLRINGVIAEESWFDDDITPALFASELAAGSGDVTVWINSPGGDVVAAAQIYNMLIDYPGHVRVHIDGIAASAASVIAMAGEVVAMSPVSMLMIHNPATLAVGDADELGRAIDMLAAVKESIINAYELKTGMSRAKLARLMDQETWMDARAAISMGFADDYLTGSRTPPDPDDEDGEEPDKQKPWPPTSRNPAPLGDAASGVCFARKPAEQRLVAHLTDTPPTTPPPAPEPTRPAGRKVVDLYAALINHTH*	common_virus_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0028	cloud	direct	high	827	0.999	GCA_008373895.1_02048
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	137871	139178	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	24350	25657	GCA_008373895_1_45_139	GCA_008373895_1_45_139	-	184823	.	PFAM:PF06074.12	Portal	MGLFDWLRGTNARQVSNHQLSSSYSFLFGPTSSGRTVTERSAMQMTAVYSCVRILAEAIAGLPLHVYRTEKDGSKVKATDHTLYRLLHDEPNPEMTSFVFRETLMTHLLLWGNAYAQVIRNGLDEVIGLYPLMPNRMSVGRDENGRLYYEYQTTSDEPAGEWSRIRLSPADVLHIPGLGFDGLVGYSPIAMAKNAIGMAQACEDYGASFFANGAAPGGVLEHPGTIKDPSRVRESWQQTFGGARNANKVAVLEEGMKYTPISVSPEQAQFLETRKFQINEIARIFRIPPHMVGDLEKSSFSNIEQQSLEFVKYTLDPWVIRWEQALTKTLLSPREKPSVFVKFNLEGLLRGDYVSRMNGYAVARQNGWMSANDIRALENLDRIAAADGGDLYLVNGNMLPLSMAGAYATTQRTQQDAPPGEEQPSVEQRVERRSR*	hallmark_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0029	cloud	direct	high	1307	0.999	GCA_008373895.1_02049
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	139208	140806	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	25687	27285	GCA_008373895_1_45_140	GCA_008373895_1_45_140	-	184823	.	PDB:6Z6D_A	Large-Terminase	MTSTYQPTRFMADGSTYNQRKADFAVAFIQALRHTKGRWAGTPFTLLGWQEQIVRDLFGTIKPDGYRQFTTAYVEIPKKQGKSELAAAIALLLTCGDGEQAAEVYGCAADRQQASIVFEVAADMIRQSPALSKRVKILSSQKRIIYKPTNSFYQVLSAEAYSKHGFNISGVVFDELHTQPNRALFDVMTKGSGDARTQPLYFLITTAGTDTHSICYEQHQKARDILAGKKHDPTFYPVIYGADLDDDWTDEKVWHKANPSLGVTVPVEKVRAACNSARQNPAEENSFRQLRLNQWVKQSVRWMPMHIWDACADPVDLDELEGRPCYGGLDLASTTDITAFVLVFPPYGEDEKYRIVPWFWIPEDNLKLRVARDHVPYDLWHAQGFLETTQGNVVHYAHIEHLIEQLGERFDIREIAFDRWGAVQMSQNLDDAGFTVVPFGQGFKDMSPPSKELMKLALEGRLAHGGHPVLAWMVDNIHVRTDPAGNIKPDKQKSTEKIDGVVATIMALDRAIRGGSSDTGTSVYDSRGLLVF*	hallmark_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0030	cloud	direct	high	1598	0.999	GCA_008373895.1_02050
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	140916	141206	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	27395	27685	GCA_008373895_1_45_141	GCA_008373895_1_45_141	-	184823	.	.	hypothetical protein	MDATRNLITNHLEIPADAAPHGEIQTAAEIPFSVLDELAEEVGAEKIPIHTLSRIGWHYTKADQIIALARQRGLSDWRYGGFDTDQVVANFRATYC*	.	hypothetical_protein	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0031	cloud	direct	high	290	0.997	GCA_008373895.1_02051
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	141312	142076	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	27791	28555	GCA_008373895_1_45_142	GCA_008373895_1_45_142	+	184823	.	PFAM:PF03050.13	Transposase-IS66-family-protein	MTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQCYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGKALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKILIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALTEAMGMLNHHFAAAA*	common_virus_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0032	cloud	direct	high	764	0.999	GCA_008373895.1_02052
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	141893	142393	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	28372	28872	GCA_008373895_1_45_143	GCA_008373895_1_45_143	-	184823	.	PDB:1ZR4_E	gamma-delta-Resolvase,-site-specific-recombination	MKDKSAAAGLLLGYARVSTDDQDLTNQRAELHAAGCTRIFAEKITGTRRDRPELARVLDHLRPGDVVTVTRLDRLARSTRDLLDIAERALLQRLAAVRGRLSLCADQAAAAKWWLSMPMASVSAEGPMPKALSTRRTSPLMPGCRHQGRACPLRRARMTSNPLIVA*	common_virus_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0033	cloud	direct	high	500	0.998	GCA_008373895.1_02053
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	142684	143697	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	29163	30176	GCA_008373895_1_45_144	GCA_008373895_1_45_144	-	184823	.	PDB:1A0P_A	Recombinase-XerD	MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVNWVRAFIRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPWLQEIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDFDHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQHTHSTDPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATPHTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTMIYTHVLKVGGAGVRSPLDALPPLTSER*	common_virus_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0034	cloud	direct	high	1013	0.999	GCA_008373895.1_02054
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	143798	144427	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	30277	30906	GCA_008373895_1_45_145	GCA_008373895_1_45_145	+	184823	.	TIGR04431	aminoglycoside N(6')-acetyltransferase, AacA4 family. Members of this family are the aacA4 type of aminoglycoside N(6')-acetyltransferase (EC 2.3.1.82), an enzyme that modifies and inactivates aminoglycoside antibiotics such as kanamycin, neomycin, tobramycin, and amikacin. Members are regularly spread among pathogens into integron, transposon, and plasmid loci, with recombination often happening within the protein-coding region. Most of the region amino-terminal to the recombination site or sites was removed from this model. [Cellular processes, Toxin production and resistance]	MLRSNDVTQQGSRPKTKLGITKYSIVTNSNDSVTLRLMTEHDLAMLYEWLNRSHIVEWWGGEEARPTLADVQEQYLPSVLAQESVTPYIAMLNGEPIGYAQSYVALGSGDGWWEEETDPGVRGIDQLLANASQLGKGLGTKLVRALVELLFNDPEVTKIQTDPSPSNLRAIRCYEKAGFERQGTVTTPDGPAVYMVQTRQAFERTRSVA*	mmseqs_cdd	nonviral_gene	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0035	cloud	direct	high	629	0.998	GCA_008373895.1_02055
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	144509	145285	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	30988	31764	GCA_008373895_1_45_146	GCA_008373895_1_45_146	+	184823	.	PRK13746	aminoglycoside resistance protein; Provisional	MIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPHSDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAKRELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQPVILEARQAYLGQEDRLASRADQLEEFVHYVKGEITKVVGK*	mmseqs_cdd	nonviral_gene	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0036	cloud	direct	high	776	0.999	GCA_008373895.1_02057
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	145449	145796	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	31928	32275	GCA_008373895_1_45_147	GCA_008373895_1_45_147	+	184823	.	pfam00893	Small Multidrug Resistance protein. This family is the Small Multidrug Resistance (SMR) family. Several members have been shown to export a range of toxins, including ethidium bromide and quaternary ammonium compounds, through coupling with proton influx.	MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAFYFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLARSPSWKSLRRPTPW*	mmseqs_cdd	nonviral_gene	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0037	cloud	direct	high	347	0.997	GCA_008373895.1_02058
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	145790	146629	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	32269	33108	GCA_008373895_1_45_148	GCA_008373895_1_45_148	+	184823	.	PRK13753	dihydropteroate synthase; Provisional	MVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDVGPAASHPDARPVSPADEIRRIAPLLDALSDQMHRVSIDSFQPETQRYALKRGVGYLNDIQGFPDPALYPDIAEADCRLVVMHSAQRDGIATRTGHLRPEDALDEIVRFFEARVSALRRSGVAADRLILDPGMGFFLSPAPETSLHVLSNLQKLKSALGLPLLVSVSRKSFLGATVGLPVKDLGPASLAAELHAIGNGADYVRTHAPGDLRSAITFSETLAKFRSRDARDRGLDHA*	mmseqs_cdd	nonviral_gene	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0038	cloud	direct	high	839	0.999	GCA_008373895.1_02059
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	146757	147257	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	33236	33736	GCA_008373895_1_45_149	GCA_008373895_1_45_149	+	184823	.	COG0454	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2) [Transcription, General function prediction only]. 	MDSEEPPNVRVACSGDIDEVVRLMHDAAAWMSAKGTPAWDVARIDRTFAETFVLRSELLVASCSDGIVGCCTLSAEDPEFWPDALKGEAAYLHKLAVRRTHAGRGVSSALIEACRHAARTQGCAKLRLDCHPNLRGLYERLGFTHVDTFNPGWDPTFIAERLELEI*	mmseqs_cdd	nonviral_gene	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0039	cloud	direct	high	500	0.998	GCA_008373895.1_02060
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	147426	148190	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	33905	34669	GCA_008373895_1_45_150	GCA_008373895_1_45_150	+	184823	.	PFAM:PF03050.13	Transposase-IS66-family-protein	MTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQCYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGKALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKILIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALTEAMGMLNHHFAAAA*	common_virus_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0040	cloud	direct	high	764	0.999	GCA_008373895.1_02061
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	148209	148529	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	34688	35008	GCA_008373895_1_45_151	GCA_008373895_1_45_151	-	184823	.	pfam18756	Nucleotide modification associated domain 4. An alpha+beta fold domain typically associated with DNA methylases and likely to be involved in modified nucleotide biosynthesis.	MNTTEKLTTEALQMRVDSYGAILAHGDYTLATFATWTKKDGYGNSAQVYRLTEAPIDGFGPNARGRSECALELIAEADHLFADAGHAIAWALTQIGSVAKIGGSQR*	mmseqs_cdd	nonviral_gene	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0041	shell	direct	high	320	0.997	GCA_008373895.1_02062
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	148745	149395	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	35224	35874	GCA_008373895_1_45_152	GCA_008373895_1_45_152	-	184823	.	PFAM:PF12224.7	amidoligase-enzyme	MSILAFTPHKTGRKKLAQLLADHLGTEATYLGTPSFAYQIADATLDRDWTLYLPDGIEAQAVLESAHKAGFETADPGEVALTVTMPTTGWSERTRANLEALLAAKGPLIAKALGIPATPVQFNDDETVSFPWCESITPETAREAVIPLVAKLCQRAQEATRIRSTPPAPGNDKYTMRCFLLSLGFIGPEHKQARRILLAGLEGDAAWRTPASRKEN*	phrogs_hmm	hypothetical_protein	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0042	shell	direct	high	650	0.998	GCA_008373895.1_02063
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	149392	149577	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	35871	36056	GCA_008373895_1_45_153	GCA_008373895_1_45_153	-	184823	.	.	hypothetical protein	MSELHIEISELIAAGVNVYDPEETLRVARARGYQLVVRVIEYDPTRFLSMVAAWFEKEVVA*	.	hypothetical_protein	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0043	shell	direct	high	185	0.995	GCA_008373895.1_02064
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	149726	150976	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	36205	37455	GCA_008373895_1_45_154	GCA_008373895_1_45_154	-	184823	.	PDB:5HFJ_C	Adenine-specific-DNA-methyltransferase	MLIKQLPISELKPADYNPRKDLKPGDADYEKLKRSLTEFGYVEPVIYNHTTGHVVGGHQRLKVLADLGHTDVDCVVVELDETREKALNVALNKISGDWDESKLALLIADLDAADFDAELTGFDDDEIQAMIGSLDDDEVTDDGFDLTAALEAASFVQRGDIWTIGRHRLVCGDATNADDVAVLMDGKSANLVLTDPPYNVAFESSDGLTIKNDAMKADSFYEFLLTAFTNMAGVLDKGGSAYVFHADTEGLNFRKAFIDAGFKLSGCCIWVKDSLVLGRSPYQWQHEPVLYGWKQGAKHKWFADRKQTTIWNFAKPRKNSDHPTSKPLDLLAYPIRNSTQANAIILDTFAGSGSTLMAAEQTDRIAYLMELDEKYASVILRRYAEATGDAAGITCQRGNTQYTYLDLVKQVDRDRE*	common_virus_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0044	shell	direct	high	1250	0.999	GCA_008373895.1_02065
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	150948	152138	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	37427	38617	GCA_008373895_1_45_155	GCA_008373895_1_45_155	-	184823	.	PDB:5H9U_C	S-adenosylmethionine-synthase	MSVVRSAESVCIGHPDKLCDLIADHILDDILTRDPAARVAVEVMASGRRIIVTGEITTTIRPQLRACAREALRRAGYNPNRFLIYVWVRRQSADIGAGVTTSIEARAGDESAYASLGAGDQGTVYGYATNETPQRLPLPLVLAHEICRRLDTARTDGTIRGIGPDGKSQVSVVYDELGTPVGIDTVIVSIQHDANKDTGVLEREVRTLVVAPAIEAHLPGATAERVLVNPSGRFVTGGPTADTGLTGRKLMVDTYGGLGPHGGGAFSGKDPSKVDRTGAYMARLIAKTVVDARLAEECHVAISYAIGKADPVAFHIDTFGTGQHSDWLLTDAAQAIFPLRPAAMIERLGLRAPIYAKLATCGHMGHGLSEWEWTLPYADKLATEVTRRAHQAATHQ*	common_virus_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0045	shell	direct	high	1190	0.999	GCA_008373895.1_02066
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	152227	152802	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	38706	39281	GCA_008373895_1_45_156	GCA_008373895_1_45_156	-	184823	.	CDD:pfam05119	Small-Terminase	MAKDGTNRGGRRVRAGAKPEALNDKLASGRPATRLTTPAELDVFDLDGTDIGDGALLAGEPMPEPGEYLSAEQRDGQPLGADLVYRETWSWLDERGCTEFVSKRLIEQYAQAFARYIQCEQAISKFGLLGKHPTTGAAIASPFVAMSQSFGKQANVYWYEIFDIVRATCTTDYSGTTPGDEVMEQLLKASS*	hallmark_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0046	shell	direct	high	575	0.998	GCA_008373895.1_02067
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	152830	153276	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	39309	39755	GCA_008373895_1_45_157	GCA_008373895_1_45_157	-	184823	.	PFAM:PF13340.5	Putative-transposase-of-IS4-5-family-(DUF4096)	MTTKIHLVCDGRARPLAFVLTGGQVADTSVFTCVLDEIRVPGRGQARTRPDRVLADKGYPSKKNRAWLRERGIKATIPERADQIEKRQKRPGRPIDFGNEQRERYKGRNVIERCFNAVKQWRGLASRFDKTARSYAAGIYLSATLQWI*	common_virus_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0047	shell	direct	moderate	393	0.879	GCA_008373895.1_02068
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	153273	153740	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	39752	40219	GCA_008373895_1_45_158	GCA_008373895_1_45_158	-	184823	.	PFAM:PF13340.5	Putative-transposase-of-IS4-5-family-(DUF4096)	MLLNGVPGCVGDAGVMSRGVITDEVWELIGDVFPAVNTRGRPPVGRRTVVEATAWRFRTGSAWRDLPERFGNWNTIYKNFRRWATEGVWEDLLTHVQRRASLAGEVDWVVSVDSSIARVHQHGATLPRGTGGLHRTTRDPGRSRVTTRSAGHEVV*	common_virus_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0048	shell	direct	high	467	0.998	GCA_008373895.1_02069
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	153780	154346	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	40259	40825	GCA_008373895_1_45_159	GCA_008373895_1_45_159	+	184823	.	PF08020.11	Protein of unknown function (DUF1706)	MARAKTKTELLTATTSQWDVLQSLIDSMRPEIESVGLFFGADFDRPEPHWGRDKNLRDVLAHLYAWQKMLFDFVDANQNGTARPFLPAPHTWRTTPSLNMEIWEHYQDTSLGDIQDMLGSSHSQIIELIESFTDEELFTKKYFPWTGTTSLGSYLVSAAPSHYDWAIKKLRTHQKANKASPKAPNQTP*	hhsuite_tools	nonviral_gene	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0049	shell	direct	high	566	0.998	GCA_008373895.1_02070
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	154566	154943	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	41045	41422	GCA_008373895_1_45_160	GCA_008373895_1_45_160	-	184823	.	PDB:5H0M_A	HNH-endonuclease	MPFKPKRPCSHPGCPELTGTRFCPAHAKEEDARYRNYQRDPKINRRYDHRWRKIRAAYVEAHPLCEDCLARGRYTPVAEVHHVIPLDHGGTHDESNLRSLCKPCHSRQSALDGDRWRQAPRVYSY*	common_virus_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0050	shell	direct	high	377	0.997	GCA_008373895.1_02071
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	155100	155564	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	41579	42043	GCA_008373895_1_45_161	GCA_008373895_1_45_161	-	184823	.	PFAM:PF05263.10	transcriptional-activator	MNDHPIWDYFDYRKAAIGVLQDYATQAVILQQGDGYANELKASLTSIGSPRFDGLPRGNNPHAGEARVCSTLDNLDALKARNQKAQAYMDWFNPAWESLSDDDRLVLEVFFLDDLSAEDAAVKVAEHFYVERKTAFAKKQRALARFARLLFGRD*	phrogs_hmm	hypothetical_protein	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0051	shell	direct	high	464	0.998	GCA_008373895.1_02072
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	155561	156922	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	42040	43401	GCA_008373895_1_45_162	GCA_008373895_1_45_162	-	184823	.	PDB:1Z6A_A	Helicase-of-the-snf2-family	MRYEPHDYQQLATAFIEDHSQAAILLGMGLGKTVITLTAIWNLLLDSFQARRVLIVAPLRVARDTWPAEATKWDHLAGLTIAVAVGSKAQRVDALAAQAMVTVINRENVPWLVRHLGKAWPFDMVVIDELSSFKNHRAQRFKALAAVRPRLTRIVGLTGTPAANGLMDLWAQFRLLDEGQRLGRFITHYRNRWFVPDRRNGQQIFTYKPAPGAEDEIYEAISDITLSMRTTDYLRLPELTVTTKLVDLEPKERKAYERLRDEMVLDLDGQVIDAANAAALSGKLLQLASGAIYDEDGNTVVVHDRKLDALEDLVEAANGQPLLVAYWFKHDRERITERFPQARELTTSTDIEAWNAREIPLALIHPASAGHGLNLQQGGNLLVWFSLTWSLELYQQTNARLYRQGQDQPVTITHLAAGHTLDEAVLAALDNKDMTQAALINAVADTLGKQAHS*	rep_hall_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0052	shell	direct	high	1361	0.999	GCA_008373895.1_02073
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	156903	157181	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	43382	43660	GCA_008373895_1_45_163	GCA_008373895_1_45_163	-	184823	.	PDB:4QBL_E	Nuclease	MNEQAIEQHLKKAVEAIGGLCWKFTSSGTAGVPDRICIHRGRVIFVELKAPGRLPRPIQRRRIQQLKDHGVDAVVVDNIDAIQEVADALRAA*	common_virus_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0053	shell	direct	high	278	0.996	GCA_008373895.1_02074
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	157318	159582	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	43797	46061	GCA_008373895_1_45_164	GCA_008373895_1_45_164	-	184823	.	PFAM:PF04735.11	dsDNA-helicase	MKAMTMFTAQVAGQQNNAHYPNPHTVTTAADLEAVARLDHVVAEYVGGRRSAGSFVTSNCLVMDVDNSHTEEQAEWVTPESLIKRLEGVALMTATSRNHQRAKGAQSARPRFHVYFPIDPVTDAEAYAGLKKQLAARFEFFDPNAIDAGRFIYGHTNPSITVVEGERTIDTWLADTVDEDVFAQWDEGTKAIEEGSRNATLSRFAGRLLIRLGTTDEARDLFDRKAARCNPPLPEAEVESIWRSATRFAKTVENQPGYVPPEDFEASLDSVRPADYSDVGQAHALSKAYPDSLRYSEATDWLVYYDGVWYESAPAAQAVAQELTERQLAEAHELLEDAKDQLAATGAAMLLASMSKAKAQAMFNAAQQEAFAAFEDAKTYAAYALKRRESRGITNCLKEARPMLLTTPEQLDADPYLLNTPSGTYDLRHGTMSRHDHDPADLVTKQTSLDPGTDGAHLWQEALEVFFQGDAELIAYVQRIVGLAAIGQVFVEALVIAYGDGRNGKSTFWNTIARVLGTYAGNMSADVLTIGGMRNVKPELAEAKGKRLIISAESEEGVRMSTSVVKQLASTDQIYAEKKYKAPFAFTPSHTLILYTNHLPRVGAMDAGIWRRLIVIPFEAKIEGTSDIKNYADYLYTQAGGAILAWIMEGARLIHAEDYHLKAPARVVEASAAYREENNWFAQFLDANCDLDPGLSERAGDLYQAYRAWAMSTSGWARPMVDFNATVEHHGFTRKRTMHGMFVHGLALKNEFDN*	rep_hall_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0054	shell	direct	high	2264	1.0	GCA_008373895.1_02075
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	159579	160022	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	46058	46501	GCA_008373895_1_45_165	GCA_008373895_1_45_165	-	184823	.	PFAM:PF09152.9	nucleoside-2-deoxyribosyltransferase	MTTTALTADLGFSPHNTEGYPDPTSYKALKNLQRAEYGYRPLVYICSPYSGDIENNVELARALCAHAVSRHKIPLAPHLLFPQFMDDTDASERELAMFFNRILLSKCEAIWVYTARVSTGMRSEIEWAHHLELPITYLDADFQEVTL*	phrogs_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0055	shell	direct	high	443	0.998	GCA_008373895.1_02076
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	160019	160786	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	46498	47265	GCA_008373895_1_45_166	GCA_008373895_1_45_166	-	184823	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MATRDLQVFTNDAFGTIRTVEHEDKVYFCGRDVATALGYKDPVNAIKQHGRGVAFHHPITDALGRTQEARFITEGDLYRLIFSSKLPAAQDFEAWVVNEVLPTIRRHGVYAIDELLDNDEFLEHAIIQLRSERAKRLAAEQALLEAAPKVSYYDVVLQSDSLLSITEIAKDYGLSAKKLNTLLHEAGVQFKQSGRWFLYARFAEQGYTQSKTHEYDEGKTRTHMYWTQKGRLFVYDLLKNQFDLLPVIEQDGGAA*	common_virus_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0056	shell	direct	high	767	0.999	GCA_008373895.1_02077
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	160950	161771	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	47429	48250	GCA_008373895_1_45_167	GCA_008373895_1_45_167	+	184823	.	pfam09509	Protein of unknown function (Hypoth_ymh). This entry consists of a relatively rare prokaryotic protein family (about 8 occurrences per 200 genomes). Genes for members of this family appear to be associated variously with phage and plasmid regions, restriction system loci, transposons, and housekeeping genes. Their function is unknown.	MQSDSFSQRSTIRSIANVLASTDLPGLSGSQIDELLLDIGAPPRVAGSKREGLFGALTEGMSAAQAGQLTREFITTAMSPARHTTDRQRWNDLRRLLNKVLATEGWHIDDAGELTQLAEAARTFDDIERLTSSLVEELQRRGTHERLMEYCSQELIAESLFHAISEAAKSIPDRIRILTSLTDDGQELFDAALGTNNSAPKLVINSFSTESEKSEHKGFKNLLIGIHGHYRNPRAHKTRLGSEEGKHDFLDAFSLFSYVHRRLDSAQQYQSFM*	mmseqs_cdd	nonviral_gene	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0057	shell	direct	high	821	0.999	GCA_008373895.1_02078
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	161756	163717	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	48235	50196	GCA_008373895_1_45_168	GCA_008373895_1_45_168	-	184823	.	CDD:cd08642	DNA-Polymerase-I	MHELFVDLETFSPVNLTKSGVYPYAEHPDFDVLLFGYSIDGNPVKVVDVASSEQLPAEVAEALVDPGVTKWAFNAAFERVCLSAWLARHHPDLIAGRNFLDPAQWRCTMVWSAYLGLPMSLDQVATVLDLPVRKDSAGEKLIRQFCTPATPSVFNQGGMRNPPASDPDGWEQFISYNRRDVEVELAIHDRLAGFPMPEAEWDTYALDQNVNDTGIRLDRVLVDNAVACDRQHRAATLTRAQELTGLENPNSPIQLKEWLADHGTPLQSLTKDEVAAALDTATGQVREVLLLRGELAKSSVKKYEAMQHVAGRDGRGRGFLQFYGAGRTGRFAGRLVQVQNLPRNYLPDLSEARSLVRTGNYDAVELLYDSVPDTLSQLIRTAFIPADGHRFVVADFSAIEARVIAWLAGEATTLEAFRDGKDLYCETASRMFGVPVDKHGANAELRQKGKIAVLACGYQGGVGALKAMGALRMGLAESELQPLVDAWRAANPNVVQLWADINAAAIEAISTRLPTSVGALTFTVESGIMFIRLPSGRRLAYVKPKLGENRFGGTAITHEGITTGRKWGQLETYGGKLTENIVQAVARDLLTFGMHQVDRAGHRIVMHVHDEIVVETATATVDEICKLMAITPDWATGLPLAADGYVCDFYMKD*	rep_hall_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0058	shell	direct	high	1961	0.999	GCA_008373895.1_02079
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	163796	164005	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	50275	50484	GCA_008373895_1_45_169	GCA_008373895_1_45_169	-	184823	.	.	hypothetical protein	MNECYSAALWAGTTLIVAWAIGSIVGHLLGAWLASWLENRAIRKERQCVTQLMADAEAQREQYPTPAEQ*	.	hypothetical_protein	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0059	cloud	direct	high	209	0.995	GCA_008373895.1_02080
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	164023	164580	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	50502	51059	GCA_008373895_1_45_170	GCA_008373895_1_45_170	-	184823	.	PDB:1JE5_B	DNA-Helix-Destabilizing-Protein	MSATTNPTRVVTGEVRLSYANIFEAKSIQGGKPKYSVSLIIPKSDTETLAKIERAIDAAIDAGIGKFGGKRPNKAALKLPLRDGDIDRDDAAYANAMFVNANSTTPPQVVGTDLQPILDATEVYSGCYARVSISFYAFNTNGNRGIACGLGNIQKLRDGEPLGGNRISAEADFGGLTTASDDFLN*	common_virus_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0060	shell	direct	high	557	0.998	GCA_008373895.1_02081
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	164606	165739	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	51085	52218	GCA_008373895_1_45_171	GCA_008373895_1_45_171	-	184823	.	PFAM:PF12705.6	PD-(D-E)XK-nuclease-superfamily	MPDQHALLSASGAHRWLACPPSATLEAGLPESSSQAAEQGTAAHALAEWKLRRALHDALTTKPVSSWHDEQMDALTDDYVAFVQERVRDVRQACADPQVLIEQRLDFSHVVPGGFGTGDCVIIAEPTLQIIDLKYGQGVMVEAEHNPQLMLYALGALNAFGSLYDITEVAVTIFQPRRSNVSTWTIPVFELEAWAEQVVKPRAALAASGDGEFAPGEWCRFCKLSPTCRTRAEANLALAKHEFAPPAELTDAEIAQVLAQLPDLKAWAADVEAYALSLAVNQGKNWLGFKLVEGRSIRKYSDESAVAQTAEAAGVDVWDRKLKTITALERQLGKKRFSDLLGGLVVKPAGKPTLVPESDKRPALEIQSATDEFTAIK*	common_virus_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0061	shell	direct	high	1133	0.999	GCA_008373895.1_02082
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	165732	166142	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	52211	52621	GCA_008373895_1_45_172	GCA_008373895_1_45_172	-	184823	.	.	hypothetical protein	MNVTEANRYIPALNRIAEGVTMLASAIEEAAWESFEDHPGMSGARPIAAAQLAQPALEAAAEEYEAAHQPPAPAPAPEVVPVSLEQVRTVLARLSQAGHTAQVRELIQAAGANKLSEVDPSKFGRLLEQAEAIADA*	.	hypothetical_protein	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0062	shell	direct	high	410	0.998	GCA_008373895.1_02083
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	166139	166381	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	52618	52860	GCA_008373895_1_45_173	GCA_008373895_1_45_173	-	184823	.	.	hypothetical protein	MSNHRLKVTLTDQPEPDAAVSTRKVSIRSRIARKLLGNPQQLTVLVPGNQVRSVEIIRPDDDLMALARAVGVTQSGGDAA*	.	hypothetical_protein	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0063	shell	direct	high	242	0.996	GCA_008373895.1_02084
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	166444	167070	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	52923	53549	GCA_008373895_1_45_174	GCA_008373895_1_45_174	-	184823	.	PF07638.11	ECF sigma factor	MSHRPHKPHHAPYSVRTKKVDGKVYTQIYVPSSISKDGTQNYAWIELVDPPTGDERLGMSADEVLGLLYDPTYVPEWKVAYLRTAYRSFRAAENARNRGDLSYSDWEVEVHDGPQYLNVSVHEDQIDSELVVDWLLAQVSAKQTEHIRLHVFEGFSFVQIAREELPGADEADVAKRANSIGRSVKRALKKLREFIEQECPDLAPVGGV*	hhsuite_tools	hypothetical_protein	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0064	shell	direct	high	626	0.998	GCA_008373895.1_02085
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	167646	168617	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	54125	55096	GCA_008373895_1_45_175	GCA_008373895_1_45_175	+	184823	.	pfam20282	hypothetical protein	MAQMTPFRRVVDVVRPLMKGTRNLGVFTAGLIDMGMQAAQDSRGERSALQLRSAASWKGYANGSSPLPSNLASEIASRWDEVTFGGNVTENYGETALISLATNLHQLDPSINKGNCAEGLGRLLYNTFLELSGAQTAALPPEDQAVQRIEHSGNPYFDSKTNRIRFGEYSTAAAAARCEVPDEVRDEELAYVTPLLEAYCEQQYKDGIPVTVVDIPDRFTRHFQDQRKAFYSAEWLRETSWNCFHEDQAVFEIWLDNMYAGVSDTPLRSYSSAVERLLATLEQATQVQLDRIPLAQIIDLIDVWVRKGSCHELAAQQKLRWAD*	mmseqs_cdd	nonviral_gene	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0065	cloud	direct	high	971	0.999	GCA_008373895.1_02086
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	168617	169054	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	55096	55533	GCA_008373895_1_45_176	GCA_008373895_1_45_176	+	184823	.	.	hypothetical protein	MTTSLLDSAFEAELRALIFLFLLDEPVDADYLGALDTLAINQRTFGIGSNNLNGTHRLAAGELRARTALMSQALKQLTLSRLATFDTSAESAGFRITDQGAHIVNQLRSDYAERFFNAALDTIEVTGYANTSHLAKIITSVEAAS*	.	hypothetical_protein	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0066	cloud	direct	high	437	0.998	GCA_008373895.1_02087
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	169051	170925	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	55530	57404	GCA_008373895_1_45_177	GCA_008373895_1_45_177	+	184823	.	PDB:4UX3_A	Chromosome-Mainenance-protein	MTPKFWISSVTVAGHPLKPDSSVQFTRGLNVICGPSNSGKSWVLDCIDYAFGKESSKFALDESNGYTEVRLRLRTSEGTITLKRPIGKGNTNVEVTSTNPSIESGTYKSRHTRNHRSVDSILLQLIGYEDPEKLMVITSQDFKTKAFTWRTFWPACYADEDRITIKTPVLLPTQNTSATAAKCALASLITSRDYAAWARDESTDTKKLKNNAVIEYLEQQPEKLATRIESIERALGTSNEDEIKHRISEISQRMDQVQQRIALAMAEGRRIVGQLQQVREDLAESSALGARYEELAASYQARIDRLDFVQQGMHLLSEHPPAHSCPVCDRELDPATPNDVPDPNPTERDELSQRLADLNQTLRQMGDDQGELRLEQEALQEQADQINQLIRGELQPELNSLRTALDNHTALVAMRAERDELMSQQGRIAEEIKERREKQFTKGTFSPLGEFPEGFWTAMGTNLLDTLGACAFPALKTATFSRQLFDATINGKSKAKQGKGYRSFVNTAVMLSLRDYLASDEASHNPGLLVIDTPLLGLDDQQLDQELMDVREKIPQALYEHFINVQDQGQIIIADNTKFMPDLNSIDSACNVIRFTRRTDQGRFGFLIDMTDEDLKDQENTDGN*	common_virus_hmm	common_virus	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0067	cloud	direct	high	1874	0.999	GCA_008373895.1_02088
GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote	cenote	CDS	170915	171151	GCA_008373895.1	RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895.1_RAQW01000005.1	GCA_008373895.1|RAQW01000005.1	GCA_008373895_1_45	GCA_008373895_1_45@C9	57394	57630	GCA_008373895_1_45_178	GCA_008373895_1_45_178	+	184823	.	COG3655	DNA-binding transcriptional regulator, XRE family  [Transcription]. 	MATSRTFSYKPLWKLLIDKDLNKTQLQDLAGLSPATMAKLGKGANVTTDVLARICEVLDCGIADICEVLETPENNDCR*	mmseqs_cdd	nonviral_gene	C9	57630	113522	171152	GCA_008373895.1|RAQW01000005.1@region_113523_171152@tool_cenote_CDS_0068	cloud	direct	high	236	0.996	GCA_008373895.1_02089