core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	96400	96576	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	1	177	GCA_008633045_1_3_88	GCA_008633045_1_3_88	+	301657	.	PRK07597	preprotein translocase subunit SecE; Reviewed	MKFIRDTFQVLKDTTWPTRKQSWVDFISVMEYTAFFVVIIYLFDLFVTRGLVRLLNIF*	mmseqs_cdd	nonviral_gene	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0001	persistent	direct	high	176	0.994	GCA_008633045.1_01479
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	96722	97258	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	323	859	GCA_008633045_1_3_89	GCA_008633045_1_3_89	+	301657	.	COG0250	Transcription antitermination factor NusG [Transcription]. 	MDSFDKGWFVLQTYSGYENKVKENLLQRAQTYNMLENILRVEIPTQTVQVEKNGKTKEVEENRFPGYVLVEMVMTDEAWFVVRNTPNVTGFVGSHGNRSKPTPLLEEEIRQILISMGQTVQEFDIHVKVGDTVRIIDGAFADYTGKITEIDNSKVKMIISMFGNDTVAEVNLSQIAEL*	mmseqs_cdd	nonviral_gene	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0002	persistent	direct	high	536	0.998	GCA_008633045.1_01480
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	97212	97412	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	813	1013	GCA_008633045_1_3_90	GCA_008633045_1_3_90	+	301657	.	.	hypothetical protein	MTRLQKLISAKLQSYNSLKNIKRVGKNFPLFLYAILAYLQVLIFSLRAYALDNDRFPVIENEYIIL*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0003	persistent	ambiguous	low	48	0.239	GCA_008633045.1_01480
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	97465	98250	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	1066	1851	GCA_008633045_1_3_91	GCA_008633045_1_3_91	+	301657	.	.	hypothetical protein	MKTIFENQEVKLNRKNGSTVIVRNDGFSYLDAKSEKKNLNISFDKVSTILSLRYCNSNSSYNLIFRDKNGKNMAEFDTDTTIYNNGHNILETKAILLAFAASKLTKDFPNNLRDLDIILAFSMKEKEIRIASGIIYGSKHKISIEDIRRVQCVTNGTISNLALYKSDKKSFWDIPDMKVPCNEITLPLFEAIVTKNIGKGIDFSRGNGFDQKTSEFMIIRYMDANFFVNSDGTLDKEWQKQIYDRMSAYKYDLANLLEGVL*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0004	persistent	direct	high	785	0.999	GCA_008633045.1_01481
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	98597	99667	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	2198	3268	GCA_008633045_1_3_92	GCA_008633045_1_3_92	-	301657	.	PDB:1Z19_B	Integrase	MASIRKRGKYFEYRVVYRDSLGERHEASSGGFKTKAQARAAGQKREVELRNSPMSNNEVTMLDYYKAWAQLYKKPYIKKKTWNSYKQTENHIIKYFGQIKLKDMTPVRYQEFLNKFGSKYAQDTIERTHYHIKSAVKIAVRDQLIPSNFTEGAVVKSQKEKKPEAESYLEEDEYFYVISKTQENPQYISHMTLYILAISGMRFAEAMGLTWDDIDFKNQVFRVENTWDYSDTEDFSETKNEQSIREIPFNDNVAKVLKNYKKNYWRENKQGRVLFGASNRATNTALKRMVKREVHPHTLRHTYASYLIFKEVPVASISKLLGHKSILITLKVYAHQFEKMKEKHHSEVRNILSEIH*	common_virus_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0005	shell	direct	high	1070	0.999	GCA_008633045.1_01482
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	99787	100056	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	3388	3657	GCA_008633045_1_3_93	GCA_008633045_1_3_93	-	301657	.	PF13783.6	Domain of unknown function (DUF4177)	MGFFDKAKEEGSFSTASGIENLHYVVLQVTLKEKFIGTGSGNLTELENVINKQAKKGYRLHTIATSNGGSKGLVGGDRIQATMVFEKIY*	hhsuite_tools	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0006	cloud	direct	high	269	0.996	GCA_008633045.1_01483
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	100057	100476	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	3658	4077	GCA_008633045_1_3_94	GCA_008633045_1_3_94	-	301657	.	.	hypothetical protein	MKIGIRKPSLKRSLKARTTSKWKRQMKKAVILGYGQKGIGWIKNPKKALYNKVYHKTTFGLSDIVKSSKKKSSAKVKKKAVRQAKDYTVKDYKQAGIVMIILGLLLMFLIPFLGTLLLLFGIISFFVATLFSKKYSRSK*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0007	cloud	direct	high	419	0.998	GCA_008633045.1_01484
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	100492	100878	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	4093	4479	GCA_008633045_1_3_95	GCA_008633045_1_3_95	-	301657	.	PDB:3DTE_A	IrrE-protein	MTEKELCSELGIKFFVFEDTLYKDEAFYIPGLRTMFLSNKVMEEDRVKTILHELGHRNHLPHLYNIFREKYEAQANRNMIHHLMKAELEEYEDKEQFNYLAFMQKYKLKTIADETMVKEEYYNLVNII*	common_virus_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0008	cloud	direct	high	386	0.997	GCA_008633045.1_01485
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	100893	101252	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	4494	4853	GCA_008633045_1_3_96	GCA_008633045_1_3_96	-	301657	.	PDB:1PRA_A	Repressor-protein	MFSTFEKIKELCQKQGISLNQLETKLGFSANYIYSMKRGNPKVENLQKIADFFNVSLDYLLGRTDNPKIADDKEKFYFQGQEVDVEELASTAMRFNGKPLTNKDKKAIQNIIEIYLRKQ*	common_virus_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0009	cloud	direct	high	359	0.997	GCA_008633045.1_01486
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	101541	101705	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	5142	5306	GCA_008633045_1_3_97	GCA_008633045_1_3_97	+	301657	.	.	hypothetical protein	MGIGSMTVTVKIKNMEKFIELSEEFRKKARELEELAHELRTFSFEGEAVSTDSN*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0010	cloud	direct	high	164	0.994	GCA_008633045.1_01487
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	101688	102158	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	5289	5759	GCA_008633045_1_3_98	GCA_008633045_1_3_98	-	301657	.	.	hypothetical protein	MNLNQIRILEACHKFLNGITLLKEELQNDNLVYQYNGKTITFDTYQEYEQLTFIDYNPKFEYVDETRVYISDRQNLIDAFPNKHHLIALQKVSDEDQARIQIFKLLSQVNFEVLSEKYPNVKKDRFGYDFYNFETKESYPIYLFEDNATFELVAIS*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0011	cloud	direct	high	470	0.998	GCA_008633045.1_01488
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	102217	102414	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	5818	6015	GCA_008633045_1_3_99	GCA_008633045_1_3_99	+	301657	.	PFAM:PF10078.8	transcriptional-repressor	MSQQQKLWVALVKERLYNLGWSQTQLAESVGVAKATISELFKYGKGSRQLKQKISEILEIESEEN*	phrogs_hmm	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0012	cloud	direct	high	197	0.995	GCA_008633045.1_01489
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	102415	102612	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	6016	6213	GCA_008633045_1_3_100	GCA_008633045_1_3_100	+	301657	.	.	hypothetical protein	MNNVAEKVTRIDSDAYEAAVAFANEHDLKISRVVSMAVRYFAENAEVREVDVKAEKFCIGDQVIN*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0013	cloud	direct	high	197	0.995	GCA_008633045.1_01490
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	102621	102983	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	6222	6584	GCA_008633045_1_3_101	GCA_008633045_1_3_101	+	301657	.	.	hypothetical protein	MTVSRDMTELEIKVLNGIKNGASFDLPIQASELRISLGLSKRMLEEVIESLRVNFRQPIIAKRTQPSGYYLPRNEEERQAGLAPYKRQIETEQKNLAAVMAVNLDEFWQRKKPDGNQAQK*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0014	shell	direct	high	362	0.997	GCA_008633045.1_01491
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	103005	103289	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	6606	6890	GCA_008633045_1_3_102	GCA_008633045_1_3_102	+	301657	.	PFAM:PF09035.9	Excisionase	MNDLMNQMLNQFEAGLMDRALKVMHVVMDEKRRYPMELNKSQCSEMLLGTKDTGTFDARFNCHKDFPRIEGKRDKFPRDEVIDWYHRNWMKTGG*	common_virus_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0015	shell	direct	high	284	0.996	GCA_008633045.1_01492
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	103293	103454	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	6894	7055	GCA_008633045_1_3_103	GCA_008633045_1_3_103	+	301657	.	.	hypothetical protein	MPNWAKGTLKLRGRRENITSALKDMLLNANVSFEGGCDDDLLVFNSTAHYFYI*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0016	cloud	direct	high	161	0.994	GCA_008633045.1_01493
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	103456	103572	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	7057	7173	GCA_008633045_1_3_104	GCA_008633045_1_3_104	+	301657	.	.	hypothetical protein	MGMEFTQEIEIRKGKIIQDICNEYDDYQWDVPFSNLGG*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0017	.	unmatched_CDS	none	0	0	.
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	103575	103799	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	7176	7400	GCA_008633045_1_3_105	GCA_008633045_1_3_105	+	301657	.	.	hypothetical protein	MQNQKQIRLIMNWERDHYRLGTNYKNKLAKRSVEAVKLELADLSREWDSMTFSVVPKGAMKIEGDKTTIFKKRG*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0018	shell	direct	high	224	0.996	GCA_008633045.1_01494
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	103801	104478	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	7402	8079	GCA_008633045_1_3_106	GCA_008633045_1_3_106	+	301657	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MTEFKVGDEVWVKGVINQIDKGNAWDLYISTRENGVWIDSCLGECIPRNDTDEKPRYLRNVLARLRELPEHDRKVWMDEIMHEFANDYGSVKHTLGYEQGKLDGAVEAEKSNKVVIPRFVAEYIEECKKQRRSLKDSMDKRSAPFKVSIWLMRLGEYYNYKNQELFARAWLDGYDVEREKRYRIKMKNEKYNHTVVIGDYTRKELEDAGFGWVFDCEDVEVQEVE*	mmseqs_cdd	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0019	cloud	direct	high	677	0.999	GCA_008633045.1_01495
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	104478	104621	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	8079	8222	GCA_008633045_1_3_107	GCA_008633045_1_3_107	+	301657	.	.	hypothetical protein	MSRCAGTFKDYCDFCEDRYSGRFKLKENEGLFQAFDRWLEEHKKDIE*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0020	cloud	direct	high	143	0.993	GCA_008633045.1_01496
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	104588	104815	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	8189	8416	GCA_008633045_1_3_108	GCA_008633045_1_3_108	+	301657	.	PF07852.11	Protein of unknown function (DUF1642)	MVRRTQERYRIIKTKTVIPKHVAEWIERCKENELTITQALYRSPKFTEDTYKCIDWALLNQDLFISAWFHGYKIY*	hhsuite_tools	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0021	cloud	ambiguous	low	35	0.154	GCA_008633045.1_01496
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	104827	105258	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	8428	8859	GCA_008633045_1_3_109	GCA_008633045_1_3_109	+	301657	.	TIGR01671	phage uncharacterized protein TIGR01671. This model represents an uncharacterized, well-conserved family of proteins found in bacteriophage and prophage regions of Gram-positive bacteria. [Mobile and extrachromosomal element functions, Prophage functions, Hypothetical proteins, Conserved]	MIPKFRGKSTADENNGEWVYGNLIVDGRQASIVNGIIESTEQYISIGAWCPVDAETVGQSTGFKDKNGVEIFEGDIVKTTRFFGRADETGGFYEYDKKIMGVVKQLEGAWVIDTGSEAVNLWTEIEENSVIGNVWEDGGLIDN*	mmseqs_cdd	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0022	cloud	direct	high	431	0.998	GCA_008633045.1_01497
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	105248	105796	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	8849	9397	GCA_008633045_1_3_110	GCA_008633045_1_3_110	+	301657	.	PFAM:PF01710.15	HNH-endonuclease	MTIKFQKSIKFINECNCVVDFDDLERAILWYQSRPTLSIKKIYLHGNYPAVSIHNEKMHVHRLLMQYWLKTKLPFEYSVHHLNENKLDARKENLSLVFNSAHNSGHNKGKTLSDSHREKIALANKKRKGMKMKKRVHIPADELRTFLNEGNSINWIALHYNCDWSTVRARIYENPELVEGDA*	phrogs_hmm	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0023	cloud	direct	high	548	0.998	GCA_008633045.1_01498
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	105895	106071	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	9496	9672	GCA_008633045_1_3_111	GCA_008633045_1_3_111	+	301657	.	.	hypothetical protein	MFLLVIGMIAGYGKQQTQIKDLQTELERVTNEQNDVNQRQDVMINKFNQMYYEYKHKK*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0024	shell	direct	high	176	0.994	GCA_008633045.1_01499
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	106105	106458	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	9706	10059	GCA_008633045_1_3_112	GCA_008633045_1_3_112	+	301657	.	.	hypothetical protein	MATKDKSGFYNVNEMLSGIYGWTVKDGKVVTPKYEFPEEFKKRIDYFGEYMGDGLTLTGALQAIFTSNDNEKAIEEFEWGGAWLPQTKETQEFIDNSLSIVHCLVALHLLYGVGNNE*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0025	cloud	direct	high	353	0.997	GCA_008633045.1_01500
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	106451	106684	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	10052	10285	GCA_008633045_1_3_113	GCA_008633045_1_3_113	+	301657	.	.	hypothetical protein	MSEILGAVLTLVLVFFLGAFINHLDWRKERKRLDQQAKENERIELEAMYVVCAIEHDRRERMRKLAEARKKKTGWNY*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0026	shell	direct	high	233	0.996	GCA_008633045.1_01501
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	106699	107067	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	10300	10668	GCA_008633045_1_3_114	GCA_008633045_1_3_114	+	301657	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MINNVVLVGRMTRDAELRYTPQNQAVATFTLAVNRNFKNQSGEREADFINVVIWRQQAENLANWAKKGTLIGITGRIQTRTYENQQGQHVYVMEVVADNFQILQNRNKAANADSLYGEEPTY*	common_virus_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0027	persistent	direct	high	368	0.997	GCA_008633045.1_01502
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	107085	107333	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	10686	10934	GCA_008633045_1_3_115	GCA_008633045_1_3_115	+	301657	.	.	hypothetical protein	MRENGKTYNRFITGLKAMIEHLEFLEDEVRRCYHDMEEYEAKIDLLENQKMDLVETLANKTWQDMRQTAFKRRQARKWRAKV*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0028	cloud	direct	high	248	0.996	GCA_008633045.1_01503
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	107330	108079	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	10931	11680	GCA_008633045_1_3_116	GCA_008633045_1_3_116	+	301657	.	PDB:5HFJ_C	Adenine-specific-DNA-methyltransferase	MKCELFHDNFQNYKRYGIPKAQLVIADIPYNLGENAYASSPEWYVDGDNKNGESDKAKSTFFNTDVNFNIAEFMHFCSKMLIKEPKEKGKAPCMIVFCAHQQQQMVIDLAKRYGFQKYIPIVFIKKSSPQVLKANMKIVGAVEYALVLYRDKLPKFNNDGQMVLNHFPWIVDQSYPKIHKTQKPVPVLKRLIEIYTDKGDVVIDPCAGSGATLRAALELERQAYGFEIDRFFYKDAKKKMLTSFQASLF*	common_virus_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0029	cloud	direct	high	749	0.999	GCA_008633045.1_01504
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	108152	109099	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	11753	12700	GCA_008633045_1_3_117	GCA_008633045_1_3_117	+	301657	.	PFAM:PF09681.9	replisome-organiser	MSEIKWIKITTDIFDDEKIRLIDALPEHDAILVIWFKILTLAGRQGGNGLLMMNNKVHYTDEMLAAIFNRPITTIRLALQTFEQFGMIEIINGIISLPNWEKHQNVDGMEKAKEKTRKRVARYREKQKQLLENGNVTCNVTVTPCNATDIDIEIDKDREKDKDKDKDKDNIVVIDKQNFIQEIEANIGRGLVKFEFDMINDYLLNQKVSTELFLEAVKIAVANNVRKFNYIARILDNWINQGIRTPEQAYQAQRDFQAKKNNKVMVKNQKAGNNPDWSNPDYKNETSPEKQAELEKQKQELLKRLEKKDGNSKKV*	rep_hall_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0030	cloud	direct	high	947	0.999	GCA_008633045.1_01505
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	109077	109268	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	12678	12869	GCA_008633045_1_3_118	GCA_008633045_1_3_118	+	301657	.	.	hypothetical protein	MAIAKKCDRCGKFHEIYNKNDNSRNINSLVTANADEYNKRYHQKLINLCPNCKDSFFNWLKKR*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0031	cloud	direct	high	191	0.995	GCA_008633045.1_01506
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	109273	109710	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	12874	13311	GCA_008633045_1_3_119	GCA_008633045_1_3_119	+	301657	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MPFFPEINEVKTKENARKILRGYPRWRRVANDRNGQRVTTIYSFTPRNPNFTNNSQVEKLAIRKVDAEIELDAIEQAVSNLHNPFYRRILFEKYLKSTPEKDFSIYQNLAISESSYYDLLDKALIAFAEIYRNGEQVAISGENPE*	mmseqs_cdd	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0032	cloud	direct	high	437	0.998	GCA_008633045.1_01507
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	109814	110380	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	13415	13981	GCA_008633045_1_3_120	GCA_008633045_1_3_120	+	301657	.	CDD:cd01192	site-specific-tyrosine-recombinase	MRKVEPIRDLDDIERMKVYLKSKSERNYVVFMFGIYSGLRVSDIIPLKVKDITSNRIEIKEMKTGKIRRFPINPELRKAINQYIKDKNLQSYDYLFPSRKKVKADGVRTQHISRVAVYQFLKEAGNYIGLTNIGTHTMRKTFGYHHYKKNKNVAILMQIFNHSSPDITLGYIGFSQDELDETILNFSY*	common_virus_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0033	cloud	direct	high	566	0.998	GCA_008633045.1_01508
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	110556	110891	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	14157	14492	GCA_008633045_1_3_121	GCA_008633045_1_3_121	+	301657	.	pfam01844	HNH endonuclease. His-Asn-His (HNH) proteins are a very common family of small nucleic acid-binding proteins that are generally associated with endonuclease activity.	MEMRADRSGPHRVAFEKNKKIILKTRNTCGICGQPVDKSLRYPHPLSPVIDHVIPVNKNGHPSDIANLQLAHWQCNRQKSDKLYAEERAVGSVVIGNRNLPQSINWTSYRS*	mmseqs_cdd	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0034	cloud	direct	high	335	0.997	GCA_008633045.1_01509
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	110995	112266	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	14596	15867	GCA_008633045_1_3_122	GCA_008633045_1_3_122	+	301657	.	PDB:2JES_G	Portal-Protein	MSLKGMSYLRKKLLNYKLRVDMRYKQYAMKYNDISVGITIPAEVRMKYRSVLGWAAKGVDSLADRLVFREFANDDFEANEIFNQNNPDVFFDSAVLSALIGSCCFVYISQGATEIPRLQVIEASNATGVLDPITGLLTEGYAVLQRDDYGNPLLEAYFTEDMTWYYPKNEKPYSIHNPAGVPLLVPVIHRPDAVRPFGRSRITRAGMYYQRYAKRTLERADVTAEFYSYPQKYILGMDPSADAMDKWKATVSSLLRIDKDEDGDKPTVGQFTTSSMTPFTEQLKTAAAGFAGEMGLTMDDLGFVSDNPSSVEAIKASHENLRLAGRKAQRSLGSGLLNVAYVAVCLRDEFHYLRSQFVNTNIKWEPLFEADASTLTMIGDGAIKLNQAIPGFLDGEAIRDLTGVKGSGNVAPALPSEKEAVDG*	hallmark_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0035	cloud	direct	moderate	1208	0.95	GCA_008633045.1_01510
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	112259	113653	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	15860	17254	GCA_008633045_1_3_123	GCA_008633045_1_3_123	+	301657	.	PFAM:PF06152.10	minor-head-protein	MDKDIFPELIKSIQDDFERAYGKSEVVRKSFEALKSKKATYTTVNDFAIEIGEILSKALGASLSADKLPDGKLYYNIAKRLLGGTLGRNYELVSSYASDVQKQLNERTNIHLKTQIPALNQDRIDGIVNRVSSEQDFDDIKWILQDPIVNFTQSIVDDSIEKNAEFHHKAGLQPEVVRKSVAKCCDWCQEVQGIYKYPRVPKDIYRRHQRCRCIVDYDPKNGKVQDVWSKIWRKQKDSDKIKERKGLNKEENISVVRKSALQHGIKVNPIKRSKVKKTEEAIIKAVGGGDQTKGSCSSLALAYIGNKAGFDVLDYRDGKSRTFFASMLNIKNISELPSVHSHVVADTNDFTAVKKLIGQMQDDKEYYLATGKHAAIVRKKEGRFQYLELQAPFEGNGFKPITNAVLKERFGCQRSHSVYGQKLQVPNVLIDSDSLGENEEFQKILGFINTKKGQQNKGDKGYVK*	phrogs_hmm	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0036	cloud	direct	high	1394	0.999	GCA_008633045.1_01511
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	113643	113942	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	17244	17543	GCA_008633045_1_3_124	GCA_008633045_1_3_124	+	301657	.	.	hypothetical protein	MSNNDDFLEELSELANQEDDRIWSESHLDGYSDFYKENEASKVWWIDKLDAIGEHLFSFDQKKIYNLFVDYPHNMMDKEVEIFDKENPYWKEFLSNRKK*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0037	cloud	direct	high	299	0.997	GCA_008633045.1_01512
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	113996	114247	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	17597	17848	GCA_008633045_1_3_125	GCA_008633045_1_3_125	+	301657	.	PFAM:PF14083.5	nucleotide-pyrophosphohydrolase	MKYRKKPVVIEAVKWTGNNVKDLADFMGESQINYEIETRKMFIRTLEGIMEASVGDYIIKGVQGEFYPCKPDIFAETYEKTEE*	phrogs_hmm	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0038	cloud	direct	high	251	0.996	GCA_008633045.1_01513
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	114250	114501	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	17851	18102	GCA_008633045_1_3_126	GCA_008633045_1_3_126	+	301657	.	pfam19791	Family of unknown function (DUF6275). This family of proteins is functionally uncharacterized. This family of proteins is found in Firmicute bacteria and their phage. Proteins in this family are approximately 90 amino acids in length.	MLEKAKQLASQEFSRLSGREIKAEECFIVWFSKTLQNWKALVSTNAISSNEKCGDYAEITHNGDKKETYVDVYAKVSNRAIKD*	mmseqs_cdd	nonviral_gene	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0039	cloud	direct	high	251	0.996	GCA_008633045.1_01514
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	114564	115982	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	18165	19583	GCA_008633045_1_3_127	GCA_008633045_1_3_127	+	301657	.	PFAM:PF03354.14	Large-Terminase	MARTKKKLGNQNPTQSVILPYTKKKSLYKEAIDIYERTGLSSYPWQQNLLKAIMAVDKTGVWVHQKFGYSIPRRNGKSEILYILELWGLEHGLNMLHTAHRISTSHSSFEKVKRYLEKMGYEDGEDFNSIRAKGQERIELYKSGGVVQFRTRTSNGGLGEGFDLLIIDEAQEYTTEQESALKYTVTDSDNPMTIMCGTPPTPVSSGTVFTKYREACLFGKGKYSGWAEWSVNEEKEIDDVEAWYNSNPSMGFHLNERKIEAELGEDKLDHNIQRLGFWPTYNQKSAISETEWNALKVEEIPKLSGRLFVGIKYGQDGTNVSMSIAVRTADKRIFIETIDCQSVRNGNHWIVAFLKQADVSQIVVDGASGQKVLDDELKDYKIKNVILPTVKEIITANSLWEQGIYQHTICHNGQPSLAKVATNCDKRNIGSNGGFGYRSHFSDMDISLMDSALLAHWACVTTKPKKKQKISY*	hallmark_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0040	cloud	direct	high	1418	0.999	GCA_008633045.1_01515
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	116062	116520	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	19663	20121	GCA_008633045_1_3_128	GCA_008633045_1_3_128	+	301657	.	PDB:6B0X_d	Major-Capsid-protein	MSEFKAITTQEEFDAAIKSRLVREKEKYSDYDQLKSRVAELETENGGLKSSIEASNQSKADADKQVADLQSQIAGFETEKLRTRVALEHGLPLDLAARLQGDDEEALKADAEKLAGFMKIKKPVPPLKDNEPNLGNDEDAALRGMLRNMRGE*	hallmark_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0041	cloud	direct	high	458	0.998	GCA_008633045.1_01516
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	116525	117415	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	20126	21016	GCA_008633045_1_3_129	GCA_008633045_1_3_129	+	301657	.	PDB:3JB5_B	Major-Capsid-protein	MATLQSGDLFPVQTVQDIFSKVKGHSTLAKLTTQEPIPFTGTEVFVFNLEGNAEIVGEGNPSSAGNATMKPKVIKPVLITYQARVSEEFVHCSEEKQLSYLKSFIDGLAKKVAQAIDIASFHGLEPKSMTDASFKATNSFDGLITGNVVTFETDKIDENIDAAVATITANDCEVNGIALSPAAGAALGKIKVNGVVQYPEYRFGQNPDSFYGMKSDVNKTLTTVASTAKKDHVIVGDFENAVKWGYAENIPLEIIEYGDPDGAGRDLKRYREVCLRTEVYAGWGILDEQAFARVEA*	hallmark_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0042	cloud	direct	high	890	0.999	GCA_008633045.1_01517
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	117417	117623	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	21018	21224	GCA_008633045_1_3_130	GCA_008633045_1_3_130	+	301657	.	cd12935	LEM-like domain of lamina-associated polypeptide 2 (LAP2) and similar proteins. LAP2, also termed thymopoietin (TP), or thymopoietin-related peptide (TPRP), is composed of isoform alpha and isoforms beta/gamma and may be involved in chromatin organization and postmitotic reassembly. Some of the LAP2 isoforms are inner nuclear membrane proteins that can bind to nuclear lamins and chromatin, while others are nonmembrane nuclear polypeptides. All LAP2 isoforms contain an N-terminal lamina-associated polypeptide-Emerin-MAN1 (LEM)-domain that is connected to a highly divergent LEM-like domain by an unstructured linker. Both LEM and LEM-like domains share the same structural fold, mainly composed of two large parallel alpha helices. However, their biochemical nature of the solvent-accessible residues is completely different, which indicates the two domains may target different protein surfaces. The LEM domain is responsible for the interaction with the nonspecific DNA binding protein barrier-to-autointegration factor (BAF), and the LEM-like domain is involved in chromosome binding. The family also includes the yeast helix-extension-helix domain-containing proteins, Heh1p (formerly called Src1p) and Heh2p, and their uncharacterized homologs found mainly in fungi and several in bacteria. Heh1p and Heh2p are inner nuclear membrane proteins that might interact with nuclear pore complexes (NPCs). Heh1p is involved in mitosis. It functions at the interface between subtelomeric gene expression and transcription export (TREX)-dependent messenger RNA export through NPCs. The function of Heh2p remains ill-defined. Both Heh1p and Heh2p contain a LEM-like domain (also termed HeH domain), but lack a LEM domain.	MEYINKETLASIETDCELGGDWVPASELKEDYKLTVPEIKSKLDELGIEYDSKAVKSDLIALLEQHEG*	mmseqs_cdd	nonviral_gene	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0043	cloud	direct	high	206	0.995	GCA_008633045.1_01518
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	117629	118024	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	21230	21625	GCA_008633045_1_3_131	GCA_008633045_1_3_131	+	301657	.	PFAM:PF09355.9	head-to-tail-adaptor	MKNFATVDELQELWRPLKLDEQKRAEALLKVVSASLRVEAEKVGKDLDKLFVANESYACVVKSVVVDVVARTLMTSTDQEPMTQVSEGALGYTWSGSYLVPGGGLFIKDSELKRLGLKKQRYGVIDIYGTD*	hallmark_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0044	cloud	direct	high	395	0.997	GCA_008633045.1_01519
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	118011	118352	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	21612	21953	GCA_008633045_1_3_132	GCA_008633045_1_3_132	+	301657	.	PFAM:PF10665.8	Minor-capsid-protein	MARIKGIPVVLIDKVKTGQDDFGHSIFEDKEIEVENVLVSPATSEDITTQLNLTGRKADYTLAIPKGDTHDWENKEVRFFGKRWQVFGLPLEGIEDLIPLDWNKKVTVERYEI*	hallmark_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0045	cloud	direct	high	341	0.997	GCA_008633045.1_01520
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	118342	118569	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	21943	22170	GCA_008633045_1_3_133	GCA_008633045_1_3_133	+	301657	.	Uniprot:A0A0C5ADH8_9CAUD	type-I-neck-protein	MKFKLNRAGVADLMKSGAMQTVLNKHASNIKNRCGDGYEQDVYVGRNRANAMVSAKTVKAKKDNLKNNTLLKAVR*	hallmark_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0046	cloud	direct	high	227	0.996	GCA_008633045.1_01521
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	118570	118905	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	22171	22506	GCA_008633045_1_3_134	GCA_008633045_1_3_134	+	301657	.	PDB:2LFP_A	tail-completion-protein	MIEIIIKKYLDGHLDVPSFFEHETKMPDSFILIEKTSGSERDHSKSATFAFQSYASSMQKAAELNEKVKEVVKEMAELNSISGVHLNSDYNYTDTETKRYRYQAVFDINYF*	hallmark_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0047	cloud	direct	high	335	0.997	GCA_008633045.1_01522
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	118921	119472	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	22522	23073	GCA_008633045_1_3_135	GCA_008633045_1_3_135	+	301657	.	UniProtKB:F8S0S2_9CAUD	tail-protein-	MSKSSNVTTAKPKVGGAIYSAPLGTELPTDATTALNAAFKSLGYISEDGMTNTNSPESEDIKAWGGDVVNSSQTEKKDTFGFTLIEALNVEVLKEVYGSENVSGDLSTGIEVKANSKELKDHCLVAEIVMKNGVLKRIVVPQGKVTEIGEISYKDGETVGYQTTVTAFPDKDQNTHYEYIKGA*	hallmark_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0048	cloud	direct	high	551	0.998	GCA_008633045.1_01523
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	119475	119813	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	23076	23414	GCA_008633045_1_3_136	GCA_008633045_1_3_136	+	301657	.	.	hypothetical protein	MSKSKKNKVKTPSKQVTKMNLPELNSNVIKGTTSTGFKFEVLKERLANYELVEAIAEVDENPLVLPKVVKNLLGPQAEDLKEHVRDENGLVPLNRLMAEIEEIFNSKTSLKN*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0049	cloud	direct	high	338	0.997	GCA_008633045.1_01524
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	119828	120202	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	23429	23803	GCA_008633045_1_3_137	GCA_008633045_1_3_137	+	301657	.	pfam17318	Family of unknown function (DUF5361). This is a family of unknown function found in Bacteria.	MIKADENALICDLAETYHIYDYRQLPALKVAVFSIGLRDDSRIKMKLSNQKVSTETLLLAGIFDRLSILAWFKTADGQKGTNRPESIVEQLTAEPKERKEMVFTSGEEFERARKEILEKIGGEH*	mmseqs_cdd	nonviral_gene	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0050	cloud	direct	high	374	0.997	GCA_008633045.1_01525
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	120202	123189	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	23803	26790	GCA_008633045_1_3_138	GCA_008633045_1_3_138	+	301657	.	UniProtKB:R2PRN9_9ENTE	tail-tape-measure-protein-	MATELGQAYVQIMPSAKGISGSIQSALAPEATAAGNSAGSSIGYTLVKAATGIIAAAGIGRAFSAAINEGAALQQSLGGIETLFKGSADKVKAYANEAYRTTGLSANTYMENVTGFSASLLQSLGGDTNKAAEIANMAMVDMSDNANKMGTSMDRIQDAYQGFAKQNYTMLDNLKLGYGGTKTEMERLLADATKLTGVKYDINNLSDVYQAIHAIQGKLDITGTTAKEAATTFSGSFASMKAAAQNVLGKLALGEDIMPSLKALAETTSTFLFKNFIPMIGNILRGLPTVIGTVLKEGIAAIFGDGIAKSITDKIYDIYTNVSGVLNALSDMIFGSGDKADNKDFLKSYLGLDEKTASSIVNIGENIRVTFENIGSTIGNIAGIIGSFVSDLLGIAGGEKSVNAIGSEFESVTGFIKSASGAIKNFTTWLKSNETAMAVLKSTMAGLLAGFLAFKTVATIKAIISGFTVAISAAKVAVLAFNAAIVANPIGAIAAAIAAVVAGLVWFFTQTKIGQKIWAGFVSWIKNAWQGIADFFVGIWSGISDGAKNLWNGVTDTWNAVVDTIKNAWNGIVEFFSNLWSGITSGVSAAWTAITQTIMTIVQPFIDGFINIWNGIKDGLSQMWEGVKMIFQGAWDFIKSIVLGAVLIVLDIITGNFGKLGEDLGLIWQGISDAVSTIWEGIKTYFMGVVSAIVGYGQSVFENFSNALAAIWDFIKNTASAAWEWIKTTISNLITGLVQGAQNILNGLMSFLSSLWNFITSVAVGAWNGLKSSVQAIINGIVQGAQNAWNSMKQGVSNLVSGIANIFNGLRNINLWSAGRAILDGFLGGLKSAWQGVTDFVGGIAGWIRDHKGPIEYDRKLLIPAGRAIMNGLDEGLRNQFRSVKSTVSNMAGEITDSLEDQPLSIGLSGFESVNPQMDVSNAILTTKMANVAQPQSREIELLSIIAKLANRPTIVSQELDKREISRIIAEPVAEEQARKQAILNAVDGLGWQMN*	hallmark_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0051	cloud	direct	high	2987	1.0	GCA_008633045.1_01526
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	123174	124697	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	26775	28298	GCA_008633045_1_3_139	GCA_008633045_1_3_139	+	301657	.	PDB:5LY8_A	Distal-Tail-protein	MANELIKVYFNDVELTKWITVLDGFTALGGADYDPTFHNYPILNGSEFIKTRKKLKKIPVPFYVKYEGVADYDALQTSLNVDEPKKLIFSHLPDRVFYAIPSGDLDFKEIKFSGKGTINFSIVDGLAHSKNPRYFEFKKNEQGILEAEIENNGSEEIPVNYRIKLKRESGFVGITSRYGAMQFGKIEETDSVEDKKNVLLSANGTGDFSNWTDGTVFYENQNKKVVTKMTADTNLGGRLGVLSADFTNTADGAYFGAVKELNLSQQAKDWYIWARAWFETGYVSQTGAWCLSVVDSDNHFIAGMAIEKSERTRNKALVVFLMGDGAGGSRVVKSIEFSPTLWVKDNPYSLEGKDQNRNMFDLRKEGDKITYFWYGSYHSFFESKIKDKQAAKVQFFVGQYKGRNSTINELVTHHYLNDFAIYKLNVPYWRDVPNRYPTGAELFIDSTGEVNPEEKGRLYVNNLLAPDDEILGTDYFKVPPGKTKVQLLVSSFAEVESARAEIEEAWI*	hallmark_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0052	cloud	direct	high	1523	0.999	GCA_008633045.1_01527
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	124697	129037	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	28298	32638	GCA_008633045_1_3_140	GCA_008633045_1_3_140	+	301657	.	PDB:3GUD_A	Neck-appendage-protein	MKRNVRIAIRDTTDTHVVGFFDNKSGIKYNAANLTQFLKGSCSVLVLAYHSKKMVAQSGQKLAFRFKDKDFWLNINSVKKTGYNIELTAYSLSLEANKEKRGPHKPASAMTIKQYIDYYDSENSFVIGINEVADKSLKLEWSGTDTILARLYSVANGFGAELEFVTELNNDYSLKRHIINIYREGNLGKDKTGLPVRVGEKLKVINYSDNMDDFYTGIRRTGKDGLTIAGLNKKIYDDKGNLLFYSSGDTLYAPQARDKYPSIARKTNDGYIVNEDSGTEYANKEALFGYMLSELKKHCELKVDYEVEGAVDGNIGDKKTLIDAQHFDPPLYVQARISEQTESLLETSAVKTSLSNYVRKSSQIANELLQKVEQLALEATPYTIKLATNNGIIFKNNQGQSTVYPTLKKGNKTVECTWQWLVDNQSFGTSATFEVRAAGMSNKLVLTAIALIDGKEVAREQVTFSNVNDGKNGSNGEKGEDGKSLRLFTTQYKYAQKFINQYSADGYTGDWSVIENTAGLKAGDSVQIRVFNTDKQCDSWIVASVSAIMGENRIKTVSKGLIEKGDQGERGPKGATGEKGDKGDPGKPADPAPINQLKQDMELTKKDLSAVKSDLLREKSESSAKIDQVKQDVGAIRNQQTAYEQSNTQNLARITGQLGDKASKSEVKQTADGIREEISHLSTASRNYILNSDMTTATDRTTGTGLPLSSDLIRTLNAERSFTLSVDVVAQNMVAKNDKKRFGISYELKFSDGSNLWTEVFQTSDTALKRISQNFVLPAGKQIVSIAGGLYFQATGQIKLSRPKWGIGHNNKEWIKAVEDTDEQITAARTTFEKTAEGLKTDMAAVKSYVADDGKRREQLEQYTRTETARSAEALRKQASESYVAKSQYSEDARGVARRFEELNLNGTNLLPNTDFKNLIDVGNQFTVSGKTYKVKTLDKWYSSYNDGIPNPKTNYHGYFNETKFSETVFEFNESNGVREWKGLPIFITNDSRYTIGKYIFSADVNATGLGTHLEVGFYYYNKAGVRYFHGGLVKKAVTSVNVWSRISLELKINDDVDFSKEMGFYIYGYGFTSNSVLYFKRPKLTNTNWTPSVEDNKKYTETKLAEYKQTVDGQLAAVKQDVNGKVSQATFEQRANQITQTVQELNDNVVKKNQIRVNENGIVSTAEKVVNGQTLASMIAQHPEWVEIIAKLLKVKADMIVNGAITADKLNVKELSALASDLGKITAGEIEFTARFRNSPSHDTWGTVPGEYNYDATVLINSSGIYSNGKIGRENKEDKTPTITPVSYFKNGELFFANLEAGHSLKYMEMNGIHPFVRGGSSLMYFGKKEDGKDALYITCRNAELYLKSDNYTDWKQSEVNNKVRWKVQGSLVLVDFNLQFDRDGDYHLADIPKQYVPSNKMFPVQAWSLDRNKDRTAQLNVGGDLHIIGAERGIPYLGQIIWTY*	hallmark_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0053	cloud	direct	high	4340	1.0	GCA_008633045.1_01528
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	129058	129606	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	32659	33207	GCA_008633045_1_3_141	GCA_008633045_1_3_141	+	301657	.	PF07104.11	Protein of unknown function (DUF1366)	MKFRVANKYLREANKTFVAIRCDEPYTAYDRVLEGDRMNDSDEILTDAVLKMVATELDPTGAIAEMQQKLDKTSDATNKNKDSVERTSKLTDVLILLAISIEGGMQQDLYKKVASLLPTLTDGVRYSFGDIVSAPYPYDTNPKYPQGTPVILKFLDNWTHKGQPLQELLQKGACTTIMPKLN*	hhsuite_tools	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0054	shell	direct	high	548	0.998	GCA_008633045.1_01529
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	129623	129853	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	33224	33454	GCA_008633045_1_3_142	GCA_008633045_1_3_142	+	301657	.	.	hypothetical protein	MAPDVVNAVVTISASLIGTFGGIVTSAKLTTFRIQELEKKVEKHNSVVERTYRLEERTNYFDERIDKLESKIEKEK*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0055	cloud	direct	high	230	0.996	GCA_008633045.1_01530
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	129855	130139	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	33456	33740	GCA_008633045_1_3_143	GCA_008633045_1_3_143	+	301657	.	PFAM:PF06946.10	holin	MQQILITAGVVAPIISAIVNVAKAQFKLDGKQVSTLALVLGVVVGLTYAATIVRGDYAVYGWGGLIAGLSAIGYYELAFKNKKGDTTDDTKKEN*	phrogs_hmm	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0056	cloud	direct	high	284	0.996	GCA_008633045.1_01531
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	130117	131418	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	33718	35019	GCA_008633045_1_3_144	GCA_008633045_1_3_144	+	301657	.	CDD:cd06415	Cpl-1-lysin	MTQKKKIKQLLAISAIFIGFIAPTVAQAAVGDQGVDWSVYQGTNGIFGYGHDKFAIIQIGGINAYGMYGQSTYETQVASAIAQGKRAHTYVWYEVGGNAALGEQVLNTFLPQVQTPKGSIVALDYESGASASKEANTNAILHGMRMIKAAGYTPMYYSYKPYTLDHVDYNRILAEFPNSLWIAAYPDYNVTPSPNYNFFPSLPGIAIFQFTSTYIAGGLDGNVDLTGITDNGYGRKNTPKTQTPAIKEGEKADNTPKGDIKAGDTVKVNFSATNWATGEGIPDWVKGRSYQVAEVSGDKVLLAGINSWIYKRNVEIISTTNSQPQAPAVPSAGSYTVQPGNTLSGIAAKYGTTYQQLAALNGISNPNYIYVGQVLKVSGQGQSSPQNVVYHTAQWGDTLSGMASKYGTTVENIQALNGLSGDLIYAGVTYRIK*	common_virus_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0057	cloud	direct	high	1301	0.999	GCA_008633045.1_01532
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	131569	132030	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	35170	35631	GCA_008633045_1_3_145	GCA_008633045_1_3_145	+	301657	.	COG3600	Uncharacterized phage-associated protein  [Mobilome: prophages, transposons]. 	MITALDVANTFLARAKKEKIDISPMKLQKLIYILYKNYLKETKKKLFSDKFEVWKYGPVISEVYQAFKEYRSNRITEFYLNRDGSYNTVKLGNNSHFDKIFEKVWNEYRLIDGIYLSQLTHQRNTAWSKADDRDDIFLNDHDIFEEEEYEIVI*	mmseqs_cdd	nonviral_gene	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0058	cloud	direct	high	461	0.998	GCA_008633045.1_01533
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	132014	132331	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	35615	35932	GCA_008633045_1_3_146	GCA_008633045_1_3_146	+	301657	.	.	hypothetical protein	MKLSSKKENMEDIPVEEDVPKDNHFPIDNSNSIKPNEVTKDVFNTIKGHNLLGWCVAILVVIYLFEFFRNQGKISEAGGKILEIFKLLIFSLTGYLFGTNANKDD*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0059	cloud	direct	high	317	0.997	GCA_008633045.1_01534
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	133025	133807	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	36626	37408	GCA_008633045_1_3_147	GCA_008633045_1_3_147	+	301657	.	PRK05299	30S ribosomal protein S2; Provisional	MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKFADQAYDFMRDAAANDAVILFVGTKKQAADAVKDEAERAGQYYINHRWLGGTLTNWETIQKRVARLKEIKRMEEDGIFDVLPKKEVALLNKQRARLEKFLGGIEEMPRIPDVMYVVDPHKEQIAVKEAKKLGIPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAIIEGRQGEDNVESVEAELAATDTQADSIEEIVEVVEGTNE*	mmseqs_cdd	nonviral_gene	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0060	persistent	direct	high	782	0.999	GCA_008633045.1_01536
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	133890	134933	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	37491	38534	GCA_008633045_1_3_148	GCA_008633045_1_3_148	+	301657	.	COG0264	Translation elongation factor EF-Ts [Translation, ribosomal structure and biogenesis]. 	MAEITAKLVKELREKSGAGVMDAKKALVEVDGDIEKAIELLREKGMAKAAKKADRVAAEGLTGVYVSCNIAAIVEVNSETDFVAKNAQFVELVNETAKVIAEGKPANNEEALALIMPSGETLEAAYVSATATIGEKISFRRFAVVEKADDQVFGAYQHNGGRIGVITVLSGSDEDLAKHVAMHVAAMKPSVLSYKELSEEFIHDELAQMNHKIDQDNESRAMVGKPALPHYKFGSKLQLTDEVIAQAEEDIKAGLAAEGKPEKIWDKIIPGKMDRFMLDNTKVDQQYTLLAQVYIMDDSKTVEAFLESQGVTIAGFTRFEVGDGIEKAANDFESEVAATMAAALGQN*	mmseqs_cdd	nonviral_gene	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0061	persistent	direct	high	1043	0.999	GCA_008633045.1_01537
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	135009	135359	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	38610	38960	GCA_008633045_1_3_149	GCA_008633045_1_3_149	-	301657	.	.	hypothetical protein	MKMDWFKYTRHVLVWWFSTLFFFTIISANYVDVQVATLVACLFAPFLFEPSSIKPKTKWIIDLAIIVISVFAVLFTQTYRIAFTYSEITYLLISLIILILIDLVISHKGFTKRIVK*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0062	persistent	direct	high	350	0.997	GCA_008633045.1_01538
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	135618	136079	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	39219	39680	GCA_008633045_1_3_150	GCA_008633045_1_3_150	+	301657	.	COG4463	Transcriptional regulator CtsR [Transcription]. 	MSSKNTSDSIEEYIKTLLAQAGIAELKRSEIADVFQVVPSQINYVIKTRFTESRGYIVESKRGGGGYIRIGRIEFSNHHELLCDLLHSVGEQISHQVFTDIIQLLFDEQIMTEREGNLLLATTTDRVLGTNAAQIRARMLKKILQQVDRKGKN*	mmseqs_cdd	nonviral_gene	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0063	persistent	direct	high	461	0.998	GCA_008633045.1_01539
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	136083	138512	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	39684	42113	GCA_008633045_1_3_151	GCA_008633045_1_3_151	+	301657	.	PDB:4M4W_K	Replicative-helicase	MKYSKALTESIESAQLLASHFETDYLESWQLLIAMANNPYSVAGSVLNDYPLEIDDFEKAAFHITGKVYQQEGDFTIWPFSYRMKVLFLTAEQIAGAVHANNLGTEHILLAMLFDRGSLAARILEFIGFSYEDKEGVLRMTDLRKNLEHKASWNKEDLKAIRHLNKSAAATRQTMANMMGMPPATSGGLEDYTRDLTEMAHMGLLEPVIGRDKEISRILQILSRKTKNNPVLVGDAGVGKTALALGLAQHVADGQVPNELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEADGHVILFIDELHTIMGSGSGIDSTLDAANILKPALAKGTLRTIGATTQEEYQKYIEKDAALSRRFAKVTIEEPTVADSIAILQGLKKSYEDHHKVVITDSAIETAVKYAHRYLTSKHLPDSAIDLLDEAAARVQNKSPQNHVKAELSAADEALMAGDWNKVDTLLEKESQPIVYKLRVKDEDVLATLSSLSGIPVQKLTQTDAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGSFLFLGPTGVGKTELAKALAEVLFDDETALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATSLRDDKTVGFGARDVRFDHENMEKRMMEELKKAYRPEFINRIDEKVVFHSLTSEDMQEVVKIMVQPLISSLAEKGIKLKFQPSALKLLAQEGYDPEMGARPLRRILQTRVEDHLSELLLSGELKMGQSLKVGVKAGKLKFEVL*	rep_hall_hmm	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0064	persistent	direct	high	2429	1.0	GCA_008633045.1_01540
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	138559	138999	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	42160	42600	GCA_008633045_1_3_152	GCA_008633045_1_3_152	+	301657	.	PRK03624	putative acetyltransferase; Provisional	MNIREMIEEDYDQVYQLWLSCAGMGLNHLDDSKEGIAQFLKRNPQTCLVAVENQIIIGAILVGFDGRRAYIYHTAVHPNYRRRGIARQLVETVLTVLDELKIHKVALVVFKRNEEGNKFWEKLGFSVREDLIYRNQARIEMVRLDT*	mmseqs_cdd	nonviral_gene	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0065	persistent	direct	high	440	0.998	GCA_008633045.1_01541
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	139070	140041	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	42671	43642	GCA_008633045_1_3_153	GCA_008633045_1_3_153	-	301657	.	COG0042	tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]. 	MTNLNTPFLIGDVKIPNRTVLAPMAGVTNSAFRTIAKELGAGLVVMEMVSDKGIQYNNKKTLHMLHIDEEEHPVSIQLFGSDEDSLARAAEFIQENTQTDIVDINMGCPVNKIVKNEAGAKWLKDPEKIYSIINKVRSVLDIPLTVKMRTGWADASLAVENALAAEAAGVAALAMHGRTREQMYTGHADLEALHNVAQALTKIPFIANGDIRTVQDAQQRIEEVGADAVMIGRAAMGNPYLFHQINHYFETGEILPDLSFEDKIQVAYDHLKRLIDLKGEHIAVREFRGLAPHYLRGTAGAAKLRGAIAQANSLVEIEALLQV*	mmseqs_cdd	nonviral_gene	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0066	persistent	direct	high	971	0.999	GCA_008633045.1_01542
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	140028	140990	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	43629	44591	GCA_008633045_1_3_154	GCA_008633045_1_3_154	-	301657	.	PRK00114	Hsp33 family molecular chaperone HslO. 	MVRGRTTKSLSYEILIFVPLPFLFYVTIKGMDKIIKTISENGAFRAYVLDSTETVRTAQEKHQTLASSTVALGRTLIASQILAANEKGDTKITVKVLGTSSLGAIITVADTKGTVKGYVQNSGVDIKKTATGEVLVGPFVGNGEFLVITDYGTGNPYHSMTPLVSGEIGEDLAFYLTESQQTPSAIGLNVLLDTNDKVKVAGGFLLQVLPGAKEEEITRFEKRIQEMPAISTLLESENHIEALLSAIYGNEPYKRLSEEELRFQCDCSKERFLNALSSLPKSDLEEMRDEDHGAEITCQFCQSTYHFDEKDLEELIRDKS*	mmseqs_cdd	nonviral_gene	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0067	persistent	direct	high	962	0.999	GCA_008633045.1_01543
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	141109	142380	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	44710	45981	GCA_008633045_1_3_155	GCA_008633045_1_3_155	-	301657	.	PFAM:PF05816.10	tellurite-resistance	MSQEFNFDIDKIANNAISKTDRTAEIIESTETQANGQMNFLEKLTPEQQDAIIAKAPQLVDNFISDQNTLLDFGQAAVEEVNNTVNRILAEQKKLQIPQVDELLKNTNKELNGFVAKYKDTQIAELDKKPNFLEKLFKQSKNTLQEFYFDSQNIEQKMDSMAATVVKQEDLLARNIVSAEMLIEDNTKSIENLVGVISFIEATQKEAGARASTLQNEVAQLDTATLDYQTKSQELARLTEVVNTLEQQHTEYISRLYVAWATTPQMRNLVKVSSDMRQKLGMLRRNTIPTMKLSIAQLGILQQSMKSGQVADAISNANNAALQMLAETSKEVIPQMERISQNPTIAVESVTKLAESLVAQNQGIISAIDKGREKRALLEATVIKSAETINDSVKLRDQKIIQALLDQGKEIQKEVDKPTTSET*	phrogs_hmm	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0068	persistent	direct	high	1271	0.999	GCA_008633045.1_01544
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	142399	143217	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	46000	46818	GCA_008633045_1_3_156	GCA_008633045_1_3_156	-	301657	.	PF10112.9	5-bromo-4-chloroindolyl phosphate hydrolysis protein	MPRRNYNNVRSRRWIGILLILIAVGIIIQYLIPILLSIGIGYGIYYYATHKPKKITEPSASQQIEDLKKEIRAADSRIKQLDNYLKEKSYANYQQLADQLLPQLSYIQGRANTLKKYISPEIYQRIQRKVQNVTTDIHEQLHNLHAQTSESLKPNLEELAPELLETIHNIQIDHEAILKKISQSESNNKEELTAIHQSQMEHYEDILEGYLKIKTSPKDFYNAEERLSSAKAAIEQFDLDLDETLRQLNEADLRDFDISLRILSKKEPNTEL*	hhsuite_tools	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0069	persistent	direct	high	818	0.999	GCA_008633045.1_01545
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	143459	143695	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	47060	47296	GCA_008633045_1_3_157	GCA_008633045_1_3_157	+	301657	.	cd08287	formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family.  The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones.  FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.	MKAAVFVEPGKMEVREVARPGAVVGRVGVPHTGDINIGDYWMVNLAMAGGPASCTTYDKEVLLKAVLDGQINPGKVFT*	mmseqs_cdd	nonviral_gene	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0070	shell	direct	high	236	0.996	GCA_008633045.1_01546
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	144053	144907	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	47654	48508	GCA_008633045_1_3_158	GCA_008633045_1_3_158	+	301657	.	TIGR01716	transcriptional activator, Rgg/GadR/MutR family, C-terminal domain. This model describes the whole, except for a 60 residue N-terminal helix-turn-helix DNA-binding domain (pfam01381) of the family of proteins related to the transcriptional regulator Rgg, also called RopB. Rgg is required for secretion of several proteins, including a cysteine proteinase associated with virulence. GadR is a positive regulator of a glutamate-dependent acid resistance mechanism. MutR is a transcriptional activator for mutacin biosynthesis genes in Streptococcus mutans. This family appears restricted to the low-GC Gram-positive bacteria, including at least eight members in Lactococcus lactis. [Regulatory functions, DNA interactions]	MTHFGKIFKKFRQSRGIKLKDVAKHGLSKSQLSRFERGETDLTITKFMRALQVINMPIDEFMYAVHDFRRDELNELLERIRVYITTRDILNLKKLLIEQQEKIPEHQIFHELNIILIKIKLQDISGEDSVSEQDIKHLIDYLFSVEFWGNYEILLFANTLDVFNHETFMVLSREMVRRSDFYKEIPNNRRIISTLLLNSYITCIERCELMDAVYFEKQLKACFFIETEIYERLVFQYAKELYKLKKTNDTRSIIEMKKYIAALKLAGSNGLAETFDIHLTKLLK*	mmseqs_cdd	nonviral_gene	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0071	shell	direct	high	854	0.999	GCA_008633045.1_01547
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	144923	145099	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	48524	48700	GCA_008633045_1_3_159	GCA_008633045_1_3_159	+	301657	.	.	hypothetical protein	MWEFILFKVDRSIIELSNKEYIVMKLDMKPNQKLDLSVKKVDLSVAVLTRDSSKAHGH*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0072	shell	direct	moderate	107	0.605	GCA_008633045.1_01548
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	145170	146240	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	48771	49841	GCA_008633045_1_3_160	GCA_008633045_1_3_160	+	301657	.	COG0535	Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family [General function prediction only]. 	MDERLWLTNWNSLYIQNDIFFTDAIKPVYVGFKITENCNQRCSHCWAGKNLTINHSFDEIIAALNKIKILNPLHITITGGEPLVHEHWLDILGYAKKNFPIVELFTNAVLFSEKSIKKLSSLFGDLDFIQVSLDGLRTTYKKQRGSDDFQKVIENIKLIVKYNLNIRVNMTITHLNIEEMIDVYELVDSIGITSFSISPVYPLRRGKKLVSLVDYTQYLHKGKLIEKMHAKRKSQMNLTVIYPMEVLSEKATYTQESTYFQRFNTDLLHWTIDGRGDIFHFMDQFIYKELKVGNIYENTIEELEANDYTIQKNVLEHSNQGLKCMNCSLVESCPAYAKSYPEIAFSYKRCVFNEKQ*	mmseqs_cdd	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0073	shell	direct	high	1070	0.999	GCA_008633045.1_01549
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	146227	147309	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	49828	50910	GCA_008633045_1_3_161	GCA_008633045_1_3_161	+	301657	.	COG0535	Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family [General function prediction only]. 	MKNNNLLKISQDLGNDFDLPYYIYTKVKTDTNEKVSAPLKIGLKLTNACHFRCPYCFVYKDNDYVDFDNLKLIFQKLPQLPFEVYLTGGEATLHPQFSEIVDYLTNLGILVKLHTTGVINMQSRNYILNNLSKFSSIQISIDSIKNFDKLRPNIIDKDPLERIISFVKQCKEKKYKNLLVNTVISSLNVNELDEIMEFCLCHNLFKVQLSTIFTTSKRLLVSDEIYAKHYNQIITKYSKKGLCFQNSPFCHPWSYAIKHNLKYDSPMYCPAQKTEFEIDMQGNVYPCPFLHDETHKMGNLLSDTFDEVWNSGVKELNKASWSENKKCKSCALFKDCGGGCYALAYVSQLNYDKRCILHEN*	mmseqs_cdd	common_virus	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0074	shell	direct	high	1082	0.999	GCA_008633045.1_01550
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	147299	147559	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	50900	51160	GCA_008633045_1_3_162	GCA_008633045_1_3_162	+	301657	.	.	hypothetical protein	MKISKNWFVRFEPNFQSSQKTILYNKLNGDLYELSEVYFDFINNINQKKEFSILIMKKYNINQSDVEQISKTILENLISLGVILND*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0075	shell	direct	high	260	0.996	GCA_008633045.1_01551
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	147552	148448	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	51153	52049	GCA_008633045_1_3_163	GCA_008633045_1_3_163	+	301657	.	COG1131	ABC-type multidrug transport system, ATPase component [Defense mechanisms]. 	MTDISISNLKKVFHGKVVLDIPQFTASKSEIISVLGVNGAGKSTFIKTISGLLLQDEGQVNICGYSNFSPKIHQVTKFVLESGKGYYDYLTANQNIDYFLKLNKASRSDLALNIAVLFQKLDFQQHADTLVSELSQGTRQKLSLIIALLCRPEVLCLDEPTNGLDVIAKKQLAQILLGLSKGKNTIVLLTTHDISFARDISSRVLVMDNGRIKKDDSFEHVFSRKNTWKKYEIVLPLSFQNIIERSFQNLHYVIQDEEMIIQTQEKDVKDRLLKETDIVRFEEIEQDIEEILYEVLSK*	mmseqs_cdd	nonviral_gene	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0076	shell	direct	high	896	0.999	GCA_008633045.1_01552
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	148445	149182	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	52046	52783	GCA_008633045_1_3_164	GCA_008633045_1_3_164	+	301657	.	5DO7_A	ATP-binding cassette sub-family G member	MMKDVKREFLRQIQETMQFKFNLFFANFSIFIMVSSYLHYFEESQNKFTLFCLLFTWYFTSHSITHPTFFIEDDIYDRTLISVIQSKKSVVHVLLFKILVQILIDLIKAIPIFLILSFLSDITFPASIVEIFVIVLICLLVILILYGLGFCLSSFCLTLNRTSSFTSLLSYFILFFTGILKPFDGFLGILGHIFPFYTLREFIHRPSITEVLIILWYGVVYWSIGFVLFHIFLKMAKKKGNIFHV*	hhsuite_tools	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0077	shell	direct	high	737	0.999	GCA_008633045.1_01553
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	149175	149765	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	52776	53366	GCA_008633045_1_3_165	GCA_008633045_1_3_165	+	301657	.	PF01061.24	ABC-2 type transporter	MFNELKRYFYYRKQYKFDSLCDAIYTLIFIVGIIMIFSGQTLLNILYFYIYFLVTNITLLANEELEYEIRTSQYDNLITSKYKVKRIYLRRIVAYLVWSSILFIISLFVSNVFGSSTHFVFPKMSIFGAIVFVSINLVLFLVFYMGVIKLTEKFKRVSVLLNFLNTIFLFYSGLVFPTSFETFADMLNKILSLGNN*	hhsuite_tools	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0078	shell	direct	high	590	0.998	GCA_008633045.1_01554
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	149997	150554	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	53598	54155	GCA_008633045_1_3_166	GCA_008633045_1_3_166	+	301657	.	PFAM:PF06852.11	acetyltransferase	MSLTSQIITAEFPDLEKVEQLNTEAFPEEERAPLSELLRYGDGEYSHFFAFYDGDEFVGFAFSVYNERAFYISFFAIMPHLRSHGYGGKIIDKLVDFYQRTMILEVERLDEPCDNLEQRKARMDFYKRNGFRSSHAYLEYDGLSFEILYKGPFFDEEAYRDIFKKIQEDGYFEFEIKHGHGRDWE*	phrogs_hmm	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0079	persistent	direct	high	557	0.998	GCA_008633045.1_01555
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	150824	151408	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	54425	55009	GCA_008633045_1_3_167	GCA_008633045_1_3_167	-	301657	.	PRK02471	bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB. 	MNINHLLEKIAVDAPILQATFGKDKSIVIKPKSTNFGLGISIFQEPTNLDSSQKALEIAFLEDSSVLGEEFIAGTEYCFFVLDGKCEAVLLRLPANVRGDGRHTIRELVATKNANPLRSRDHRSPLERIKLGEIELFMLEQQGYKADDILPKGVQVFLRCNSNISTGGDSVDVTEIMHTSYKELAAEMATAMGA*	mmseqs_cdd	nonviral_gene	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0080	persistent	direct	high	584	0.998	GCA_008633045.1_01556
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	151698	152990	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	55299	56591	GCA_008633045_1_3_168	GCA_008633045_1_3_168	+	301657	.	PRK01117	adenylosuccinate synthetase; Provisional	MTSVVVVGTQWGDEGKGKITDFLSANAEVIARYQGGDNAGHTIVIGGKKYKLHLIPSGIFFPDKISVIGNGMVVNPKSLVRELTYLHEEGVTTDNLRISDRAHVILPYHIELDRLQEEAKGDNKIGTTIKGIGPAYMDKAARVGIRIADLLDKDIFRERLERNLAEKNRLFEKLYDSTAIRFDDMFEEYYAYGQQIKQYVTDTSVILNDALDQGKRVLFEGAQGVMLDIDQGTYPFVTSSNPVAGGVTIGSGVGPSKIDKVVGVCKAYTSRVGDGPFPTELFDEVGNRIREVGHEYGTTTGRPRRVGWFDSVVMRHSRRVSGITNLSLNSIDVLTGLDTVKICVAYDLDGERIDYYPASLEQLKRCKPIYEELPGWSEDITGVRSLEELPENARNYVRRVSELVGVRISTFSVGPGREQTNILESVWSSL*	mmseqs_cdd	nonviral_gene	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0081	persistent	direct	high	1292	0.999	GCA_008633045.1_01557
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	153245	153526	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	56846	57127	GCA_008633045_1_3_169	GCA_008633045_1_3_169	+	301657	.	.	hypothetical protein	MNFTDLSNKEQEKIMISKIIRNLKKLGGYATKRELLDAIKKGENTIDENFFEEEKVSQKSGKFINLVITLLIFLPKVCLPRVIFLNQSNRLLN*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0082	persistent	direct	high	281	0.996	GCA_008633045.1_01559
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	153523	153870	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	57124	57471	GCA_008633045_1_3_170	GCA_008633045_1_3_170	+	301657	.	.	hypothetical protein	MTELGRKVKLDEHFASDIQQKAIQFWKNEKKLKQFFKLSFEKELKHSLDDSKENWRVELTRALKSMSPQKFETFARGLVKEMGVKLDEKIEVSYTNDGGLDGFILLVQMTSEPIV*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0083	persistent	direct	high	347	0.997	GCA_008633045.1_01560
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	153936	154139	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	57537	57740	GCA_008633045_1_3_171	GCA_008633045_1_3_171	+	301657	.	COG1715	Restriction endonuclease Mrr [Defense mechanisms]. 	MDKYNAEYGIFITTSDFSRSAIEAARQGTRVITLINSEDIADLVAKYKLHVKEVTTYELGDFYYTED*	mmseqs_cdd	nonviral_gene	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0084	persistent	direct	high	203	0.995	GCA_008633045.1_01561
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	154151	154618	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	57752	58219	GCA_008633045_1_3_172	GCA_008633045_1_3_172	+	301657	.	COG0590	tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]. 	MNYTVEEKEFFMREALKEAEIALANDEIPIGCVIVKDGKVIGRGHNAREELQRAVMHAEVMAIEKANQHEHSWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIYGAKNPKFGAAGSLYDILTDERLNHRVELETGILEVECAQMMQDFFRKRRQR*	mmseqs_cdd	nonviral_gene	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0085	persistent	direct	high	467	0.998	GCA_008633045.1_01562
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	154615	155157	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	58216	58758	GCA_008633045_1_3_173	GCA_008633045_1_3_173	+	301657	.	.	hypothetical protein	MKRWLSILFFLLTLLFIGLLIGNVEFQAWAFTRHQNQLSWYIRPILILPIIYFSYRKSLLGISASIFALFTSMIWFWEPKTTSPLVKEFLTYEQDFLQADWNLKKILFVFLVISFFLLLIRATWLHSWKLLAILLILTAFLKILWSYLDSGRAGLTIVVPAILGLFICLFFLSFWMKGKS*	.	hypothetical_protein	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0086	persistent	direct	high	542	0.998	GCA_008633045.1_01563
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	CDS	155383	156249	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	58984	59850	GCA_008633045_1_3_174	GCA_008633045_1_3_174	+	301657	.	TIGR01716	transcriptional activator, Rgg/GadR/MutR family, C-terminal domain. This model describes the whole, except for a 60 residue N-terminal helix-turn-helix DNA-binding domain (pfam01381) of the family of proteins related to the transcriptional regulator Rgg, also called RopB. Rgg is required for secretion of several proteins, including a cysteine proteinase associated with virulence. GadR is a positive regulator of a glutamate-dependent acid resistance mechanism. MutR is a transcriptional activator for mutacin biosynthesis genes in Streptococcus mutans. This family appears restricted to the low-GC Gram-positive bacteria, including at least eight members in Lactococcus lactis. [Regulatory functions, DNA interactions]	MYYMGEIFRELRTGRHISLKEATGEEFSYSMLSKFENGTSDISASKLLIGLENIRTELEEFVYLVRGFQPTSYTLLKNKLWEAQEQKDIKTLWEMYNNEIDQYQSKKEEEHILNAIVIKGHMFFLDETIQATEVELNFLYDYFFSVEIWGEYELRLFSDIAALFPIDLYFRYTREMLQRVDFLGDLQKNKNYIYTILLNGLFKAIDKKSLNKAAYFDKKIKEKFFDENEAYLRIVYLFADGQHDYILGQRNEGLTKMKNAISTLEIIGCEHSANYYSKNMSEWLKEFE*	mmseqs_cdd	nonviral_gene	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_CDS_0087	persistent	direct	high	866	0.999	GCA_008633045.1_01565
GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote	cenote	tRNA	132656	132727	GCA_008633045.1	BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045.1_BHYP01000003.1	GCA_008633045.1|BHYP01000003.1	GCA_008633045_1_3	GCA_008633045_1_3@C1	36257	36328	tRNA-Cys	tRNA-Cys	-	301657	.	tRNAscan-SE score: 55.6	Cys	NA	tRNAscan-SE	.	C1	59850	96400	156250	GCA_008633045.1|BHYP01000003.1@region_96401_156250@tool_cenote_tRNA_0001	.	.	.	.	.	.