core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	10401	11609	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	1	1209	GCA_009378225_1_22_9	GCA_009378225_1_22_9	+	165673	.	COG4536	Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains [Inorganic ion transport and metabolism]. 	MPRPRTQNLANLSFVSIAIFTVSVAAIFIPSTAFAAFELGGTPTNLALLIFFICLSLVVSFLCSISEATLLTMTPSYIDTLEEDNPKGAALLKSVKVDHIEKSISAILTLNTVAHTLGSLGAGAQAVIVFGNAWFGVFSGVMTLIILIGTEIIPKTIGTVYWRRFAMPVAYYVRTINVALLPIIWVTEKISRMLTRGNQEIGFNRHEFLALANQGESLGQMSEMETRIIKNSLALGMINVEDILTPRSVVSAFDENMTVGDVFASYPKLPFSRFPIFDEDLDNATGFILKSDLLIAKANQEIHTPIKQFRRDINFVFAKMKLFDLLDLMLKEQVHIALAVGEFGEVKGLVSLEDVLETLLGLEIVDEFDRVDDMQILARQLMDKRMARLGAKLEEDAPFDEK*	mmseqs_cdd	nonviral_gene	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0001	persistent	direct	high	1208	0.999	GCA_009378225.1_01399
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	11715	12320	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	1315	1920	GCA_009378225_1_22_10	GCA_009378225_1_22_10	+	165673	.	PF13474.6	SnoaL-like domain	MAYSFIDKYIEYKGWFMKYSTRSVLRKAVAASMLTAVIRSAIQLTGRSFGKGASIGLFIGMIGVQSLITTNAYAISEQDVSRYASSMSSAANAQNIAQISRLIDDDAIISLSRGGKTTSLDKEGYLQLLQKSWATSSDYRYRINVADVVVTGNQARAQIVTTETWTQDGKPVTIKTASRATFSQVGNNAVLLRSVSQVTVD*	hhsuite_tools	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0002	persistent	direct	moderate	557	0.919	GCA_009378225.1_01400
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	12515	14974	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	2115	4574	GCA_009378225_1_22_11	GCA_009378225_1_22_11	+	165673	.	PDB:5EMI_A	Cell-wall-hydrolase-autolysin	MKKHTKSSISTQILKPLSLAISSCILVACSSTGTPAKPVSQTPKPIPQAKPSQQINISSGNTNLGNTKTGADVDVLDVQMLDALEALLQATDMSMVEGDELAIQRYGNLWDRVRRGYRINEMTNARIEAQKSWFYTRQTYLDRLTARASRYLHHTVAEAERRGIPSELALLPIIESSYDPTATSNAAAAGLWQFIPSTGRIYGLNQSATYDGRRDVIESTRAAYDFLTSLYNQFGSWELALAAYNAGPGRVSRAIKANQDQGLPTDYWSLKLPTETMNYVPRFLAVAQIVRSPNTYGINLPAIANHSHFRTVPVNYGVSLSEVATVTGLSVSELRLLNPALLNFTVDEIGPNRIVIPDSLPNQIDNQLASLKGYGFGGDYIATAPAQSITYVVPKSGATANTSSQQELIAANTLPTTIAQVTPNNTIVQEPALSKSEINLIAAEIQKTSPEVPAISPQDGNIQLNAVQTGQSVLDARGETKMLSFADGPKTQAVAQQPTQPVQVAVTPPAQPVQITVVSPTPEPISQPKPQLPPVTASIPVVSSPPVLVPPPPSRPRPEPASRPKPKPESYTVRAGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKRQPVSAQQTSQATQSTKNNQSTQSTATHRVQSGESLTAIARRYNISLHALAKENGLSVTDGVLIGQTLKLPSDAKAESSTPSRLGNTKNNSTRTPANTNIGITENYTVRSGDSLTMLSNRFGVAIGDLATANGLASNANLRIGQTLKVPKLTTTYTVKAGDGLIALARRYGISTQELAKMNNLEPTADLRIGQVLTVPNK*	common_virus_hmm	common_virus	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0003	persistent	direct	high	2459	1.0	GCA_009378225.1_01401
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	15131	16963	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	4731	6563	GCA_009378225_1_22_12	GCA_009378225_1_22_12	-	165673	.	COG1274	Phosphoenolpyruvate carboxykinase, GTP-dependent [Energy production and conversion]. 	MTAKITAPDFVRHQALIHWVAEIAALTKPAAIEWCDGSEEENQRLIDLMIKNGTMIKLDEDKHPNSYLAFSDPTDVARVEDRTYICSKEEIDAGATNNWVEPSQMRTKLNDLFDGCMAGRTMYVVPFSMGPLGSHIAHIGIEITDSPYVVVSMRKMARMGKEVYDVLGADGEYVPCVHTVGSPLTEGQKDVAWPCNDDKYIVHFPETREIWSYGSGYGGNALLGKKCLALRIASAMGREQGWLAEHMLILGVTNPQGKKHYIAAAFPSACGKTNFAMLIPPAGYEGWKVETVGDDIAWIKPSEDGKLYAINPEAGFFGVAPGTNTKTNSNCMSTLGSDVIYTNVAVTDDGEVWWEGKTKETPANLTNWKREPHTGAERAAHANARFTVSAKQCPSIDPQWENPEGVPISAFIFGGRRADTVPLVSEAFDWVDGVYKAATMGSETTAAATGQQGVVRRDPFAMLPFTGYNMADYFNHWLQMGENLGKKAKAAGNQLPKMFKVNWFRRDTNGDFVWPGFGQNMRVLQWIIERCEGTANAVRTPIGLVPTYDDINWDQSDFTKAQYELVTSQDKDAWIKELESHAELFDKLGERMPTALKAHNAKLKADIEQA*	mmseqs_cdd	nonviral_gene	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0004	persistent	direct	high	1832	0.999	GCA_009378225.1_01402
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	17261	18679	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	6861	8279	GCA_009378225_1_22_13	GCA_009378225_1_22_13	+	165673	.	PDB:3BH0_A	Helicase-ATPase	MAKAKSSYICQNCGAIYGKWAGQCTDCGEWNTLVEAPNTSLPHHHKSKTTTAPRKTANYAGAVSAVMTLDHVGVTLETRMPTGIGEFDRVLGGGLVAGSVVLIGGDPGIGKSTILLQTAINMAAGDSLSGSALYITGEESLSQVAMRAVRLGLPTDRLRVLAETNVDTICAALTTEQPAIAVIDSIQTLFTEAIQSAPGGVAQIRESAAVLTRYAKQTGTALFLVGHVTKEGALAGPRVLEHMVDTVLYFEGESDSRFRMIRAIKNRFGAVNELGIFGMTDTGLKEVANPSAIFLSRYDKPIAGSVVMVSREGTRPLLVEVQALVDDSQGQPRRMALGLDYQRLSMLLAVMHRHGGIHTSGMDVYVNVVGGVKVMETGSDLAVLIACASSIKEKPLPVRLCVFGEVGLSGEIRPVPNGQERLKEAMKHGFTHAIVPRANAPAANHPQFKNIQIIAVDRLDEAIYQAFEINAG*	rep_hall_hmm	common_virus	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0005	persistent	direct	high	1418	0.999	GCA_009378225.1_01403
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	18721	19440	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	8321	9040	GCA_009378225_1_22_14	GCA_009378225_1_22_14	-	165673	.	COG1118	ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]. 	MSIKIQNIHKTFGDFVALGEISIDISTGELTTLLGPSGCGKTTLLRIIAGLENADNGRIYFDSIDVTDIPVQHRGIGFVFQQYALFRHQTVAQNIAFGLTLLPRNTRPSANTIDRRVDELLDLVQLSHTKTRYPHELSGGQRQRVALARALATEPKLLLLDEPFGALDAKVRKSLRDSLKDIQREIGITSILVTHDQEEAQAISDKIVIMNHGQIEQIGTPSKLFAQPSSDFVVDFLGL*	mmseqs_cdd	nonviral_gene	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0006	persistent	direct	high	719	0.999	GCA_009378225.1_01404
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	19533	20372	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	9133	9972	GCA_009378225_1_22_15	GCA_009378225_1_22_15	-	165673	.	COG4208	ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]. 	MSHTSSYLYQKNPATRDKPWVRWSLIGIAVVFMGVMLVVPLVSVFYEALKEGWQAYQAALLEPDALASIKLTLITAAIILPINTIIGVALAYLITRHQFRGKFVITTLLDLPFAVSPVVAGLMFVLVFGANTRLGGYLESMGIQVIFATTGIVLATLFVTFAFIARELIPLMQAQGDSEEQAALTLGANGWQMFWKVTLPNIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTVPLMIEIAYNEYAFTLAFALSSLLALLALITLVAQGLMSHKK*	mmseqs_cdd	nonviral_gene	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0007	persistent	direct	high	839	0.999	GCA_009378225.1_01405
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	20417	21295	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	10017	10895	GCA_009378225_1_22_16	GCA_009378225_1_22_16	-	165673	.	TIGR02139	sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]	MLNQPIPLKNRARRVMPFFGLSMGISIFALGLLVILPFLMMILTTLQMSFDDIMQTIREPQVFAAIKLSLSMAMLATLTNLIFGTLAAWVLVRYEFWGKSFLNALVDLPFALPTAVTGIALATLYAPNGLFGQWFTHLGILLFNEPIKIAFTPIGIWLALVVVSFPFIVRAVQPVLAELSVEFEEAAAVMGAGRLTTFCRVILPEISPAMLIGAGMMFARATGEYGSVIFIAGNIPMQSEILPLIIVSKLEQFDVAGAACVSLFMLLISLVFLFTMNFIQWKLSARLGAKTN*	mmseqs_cdd	nonviral_gene	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0008	persistent	direct	high	878	0.999	GCA_009378225.1_01406
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	21645	22085	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	11245	11685	GCA_009378225_1_22_17	GCA_009378225_1_22_17	+	165673	.	.	hypothetical protein	MMMKNKWMRGLAILVLSLPTVTYAKTAAPKASEAPEVSLTQEEQMAIDFCDFSAYGVMHIAGDHQGGATKSEALTNHDKRMAELKDLIDLDPETATMLDKYWKGAIDRIFQESVQKTDAEKQAFVMGVGESSFYSCLDQVLKTPKN*	.	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0009	persistent	direct	high	440	0.998	GCA_009378225.1_01407
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	22116	23291	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	11716	12891	GCA_009378225_1_22_18	GCA_009378225_1_22_18	+	165673	.	PDB:1OYW_A	ATP-dependent-DNA-helicase	MTETTVKNFDDLPLSEPILKAVQALKFDQLTPIQAQILPHTLANQDAIGQAQTGTGKTATFLITIIESLLKRPFQADEIRYLGEPRALVLAPTRELAQQILADCRELTRFSQLYNLCITGGSDFDKQLEQLHKRPLDILIGTPGRIIDWVNKGELFLDRVEVFVLDEADRMLDMGFIPDIKRIVRHMPSNTERQSLLFSATFNQDVMNLAYRWLHQPAFVEIAPESKTNQAIDQQFYLVTEREKTSALKQILADDSVKKTIIFANRKDQVKRLYDYLRRHHKVTMLSGDVAQQKRERYLQRFKDGEVNVLVATDVAGRGIHVDDVTHVINYTLPDMPDDYVHRIGRTGRAGLSGVSISFVSENDAFNLPALERHIDQKFKLNQFEFLDEHK*	common_virus_hmm	common_virus	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0010	persistent	direct	high	1175	0.999	GCA_009378225.1_01408
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	23305	24480	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	12905	14080	GCA_009378225_1_22_19	GCA_009378225_1_22_19	+	165673	.	COG0635	Coproporphyrinogen III oxidase or related Fe-S oxidoreductase [Coenzyme transport and metabolism]. 	MYPDLLDPAHIPLSLYIHIPWCVKKCPYCDFNSHALPSQVPFENYIEALLSDAVSQQSLVSNRQIDTVFIGGGTPSLLPIESFKRLFDGLRLIYDFAPTCEITLEANPGTLEHSPFDEYLTIGINRLSIGVQSFDHNALTVLGRIHNPDQASNAIRAARIAGFDRVNADLMYGLPNQNPSKAVNDIQTAIDAGATHLSWYQLTIEPNTTFYCTPPQLPDEEIMAEIETLGQSVLTKHGFYNYEVSAWHGPNDAPCQHNLNYWQFGDYLAIGAGAHGKLTLKNHPDYQDGIYRYQKSRQPKDYLAFEDAPKMVNFERISDDNLPFEFMMNALRLKDGVSTDVFETRTGLLISTIDNEMLPLQHQGLMVLDPLRIAPTRLGFRYVNYLVSQFI*	mmseqs_cdd	nonviral_gene	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0011	persistent	direct	high	1176	1.0	GCA_009378225.1_01409
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	24562	24702	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	14162	14302	GCA_009378225_1_22_20	GCA_009378225_1_22_20	-	165673	.	COG5510	Predicted small secreted protein  [Function unknown]. 	MKKVLVASIAAVVVLTGCNAIKGFGKDVSKAGEAVSDTAQKVEKKI*	mmseqs_cdd	nonviral_gene	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0012	persistent	direct	high	140	0.993	GCA_009378225.1_01410
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	24950	25495	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	14550	15095	GCA_009378225_1_22_21	GCA_009378225_1_22_21	+	165673	.	COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ribosomal structure and biogenesis]. 	MSQFSDALIHIVLFSPKIPNNTGSIIRLCANTGAQLHLVKPLGFELDDTRLKRAGLDYHEYATLSVHDNWQETKSALKSLGVERIVAMTTKFSRPFYEYQFKLDNDQHKVALVFGSETDGLPEEVRADIGANHWLRLPMLPDSRSLNLANSVGICLYEVWRQLGFVGDIGQSVGYHKPTSR*	mmseqs_cdd	nonviral_gene	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0013	persistent	direct	high	545	0.998	GCA_009378225.1_01411
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	25611	25826	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	15211	15426	GCA_009378225_1_22_22	GCA_009378225_1_22_22	-	165673	.	.	hypothetical protein	MTDSTTSPARQKATNTYRQKALANIALVISHTEPHVLDALNQIMAHKDCSKAMAIKVALVEYANTLSQTSR*	.	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0014	shell	direct	high	215	0.995	GCA_009378225.1_01412
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	26229	26633	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	15829	16233	GCA_009378225_1_22_23	GCA_009378225_1_22_23	-	165673	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MLYPIAILKGGDKTAHGIFFPDVPNLASACDELQDIHKMALECLDVHFSGLVTDGEEIPLPTNFDAHTQNSQFDGMMWAWVDVDLSKYDVKSHKINITLPNHLIAKIDEKVAAHKSLYKSRSNYLAQLAMADLA*	mmseqs_cdd	nonviral_gene	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0015	shell	direct	high	404	0.998	GCA_009378225.1_01413
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	26845	27042	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	16445	16642	GCA_009378225_1_22_24	GCA_009378225_1_22_24	-	165673	.	PFAM:PF16777.4	transcriptional-regulator	MPKIVANPKTRAQIQKDSDARRGVKPIGFKVPIEFAELLDELAKQSGKTKNIIIMEAVELWAKQL*	phrogs_hmm	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0016	persistent	direct	high	197	0.995	GCA_009378225.1_01414
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	27618	28055	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	17218	17655	GCA_009378225_1_22_25	GCA_009378225_1_22_25	+	165673	.	6AF2_A	HIT domain-containing protein	MFQLHPTLAKDTFLVGDFPLSTVRLMNDCQFPWLILVPRVSGIKEIYELSAADQVQFLRESSWVSSQMAKIFGADKMNVAALGNQVSQLHFHHIVRYQNDAAWPNPVWGHEAMPYTQEVLSHMQQTLMMALRGHHQMPFDWKMDV*	hhsuite_tools	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0017	persistent	direct	high	437	0.998	GCA_009378225.1_01415
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	28209	28871	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	17809	18471	GCA_009378225_1_22_26	GCA_009378225_1_22_26	+	165673	.	PRK00043	thiamine phosphate synthase. 	MTLQSIDKVPKLYLLTNDDELTTLLDKLERVFDTGAVSLLQVRRKSTLKLYDLATVYREAEMIVSLANDYDIKVVMNDSLELASHFGTGLHLGQRDGSVRVAREILGDHVVIGRTCHTDLALFKEAKREGATYGAMGTAFASITKPRAKIISKDILKKACELDFPLCVIGGITLENIHQLRDKLNGAAIDYIAVTADIMGHSVDTIADKCLAWQQKLNTW*	mmseqs_cdd	nonviral_gene	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0018	persistent	direct	high	662	0.998	GCA_009378225.1_01416
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	28876	32430	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	18476	22030	GCA_009378225_1_22_27	GCA_009378225_1_22_27	+	165673	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MIDTFKPKLDLPTKANFKTTLPLLGGADLSFWLALAAKSEERLIVMIANHQNELNQLDTELSFFGIDAHVFPDWEILAYDQLSVHQDIISERIALLTRMPTTGVLLVSTQTLMQRIAPPSWLIGQHFDLAVGDKFDIHEQRLRLTKAGYVQTENVFEPGEFAVRGSIVDIFAVGQSLPFRLDLFDDNIETIKFFDPDSQRTLSDNDLAQLKKDAQAGMNTHHAQKLPSSAKITEFRLLPAREFPLEEGKEMFRQNFASLFPNASARKIEFYNDVMAAIAPQGIEFYAPLFFELDAWMKTGNLFSYLPDDTLVVSHDNLSACHDEYYQQIQARHHSRAHDKSLPIMPPDYLFLANNEFHQVLKAYPRVVINTNHDTAKIGAMESLPPPILPINHQAAKPLSELLSFIKSGQVPILLVAESAGRREIILELLKDKVAVKVVDNYQEFINNLDDFNTDCIALSVAPIECGLWLRDETGGLCIISETQIFGRQVLQTRRRRQSSISQAFLIKSVTELTEGALVVHLEHGIGRYQGLVVLDVGEGEQEFIHLKYADDASIYVPITNLALIGRYSGSDLQTVSLSKIGSGKWEKAKLKALEQIHDVAAELLNVQARRNAKSGISFDIDMSQYELFASQFAFEETIDQAEAIHAVMHDMKQSKPMDRLICGDVGFGKTEVAMRAAFIAVQAGYQVAVLVPTTLLAGQHEDSFLNRFADWPIKIESLSRFGNKKHQDAILAGLADGTVDIVIGTHKLIQDDVKFKQLGLMIIDEEHRFGVRHKERIKALQTNIDSLSMTATPIPRTLNMALSGMQDISIIATPPARRLAIKTFLLPKSDETIKEAILREILRGGQVYYLHNDVASIEAAADTLRELVGEARVAVAHGQMNERELSVVMNDFYHKKFNVLVASTIIETGIDVPNANTIIIHRADKFGIAQLHQLRGRVGRSHHQAYCYLMVPSLKGLSSDAKKRLNAITRANTLGAGFMLASEDLEIRGAGEILGKEQSGNMQTIGFGLYMDMLERATNAIKQGKTPSLATPLDLVSDIDIHASALIPDEYLGDVHERLVFYKRISSLDDVNQLIDIRTEMIDRFGTLPTQTQNLFAVHRIRIRAKALGITKIDATQTTISIEFRADTPIDGLAIIKLIQSNDGYRMNGATAIRYTSQELMDTQARIDKVNELLLYFESTKTA*	common_virus_hmm	common_virus	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0019	persistent	direct	high	3554	1.0	GCA_009378225.1_01417
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	32427	32696	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	22027	22296	GCA_009378225_1_22_28	GCA_009378225_1_22_28	-	165673	.	.	hypothetical protein	MPMSIPTKATVGYTQRRLFMVSMTVGLISLSGCQHIQVTKSPIPIIIHSHTKSPSQPKPTPTDAVPTKNRPISPPTQKSNTIFILEDWF*	.	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0020	persistent	ambiguous	low	5	0.019	GCA_009378225.1_01417
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	32696	33958	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	22296	23558	GCA_009378225_1_22_29	GCA_009378225_1_22_29	-	165673	.	TIGR02800	tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MKSPITKVCLALTISFSAALTHTYADDELIVISEQVAPSQYPVAVMPFSEAHQMSHYLSLAGLGTTHQNLPQHTQTNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEIIDTANGLVSVKHTQISDNHPASIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNKISSLKLIDPSGQLIRTLDTVNGSIITQTFSPDGLSIAYSVQTKNNLPIIYIVSVSGGTPKLVTPFWGHNLAPSFSPDGGSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPNYLADASGFIYTADKGTRRQSLYRYDFATTHSTQIASYATNPRLSPDGSKLVYLSGGQIIIANTKGRIQQSFRVLGTDVSASFSPSGTRIIYTSNQGNKNQLMIRSLSSNAIRTIPTSGTVRDPIWSK*	mmseqs_cdd	nonviral_gene	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0021	persistent	direct	high	1262	0.999	GCA_009378225.1_01418
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	33975	34769	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	23575	24369	GCA_009378225_1_22_30	GCA_009378225_1_22_30	-	165673	.	4G7X_B	Putative uncharacterized protein, TolA protein	MRLSDNHPTVNFDKSVLILPILASVLLHTVIIIAVAAPLITPPTKPNTTIQTALVGQEAFNRVKTALSNHHANQNKPTATNTSSTITANDNAFMQAQNQHRYHPQVSTSATTTQAYHPPPNSAPFESNSPNIQNQPTNAHAKLAEYSNHVSDLEQSSHTESTPSRAQINAAITSVKHRIEAIWQRYPKQPNQTITFQVNMNQQGDVTSIQFGGGHPDLRESVEAAVYAAAPFYELGGMRDSIRLQFTTEQLIMDNNQTTNEPNH*	hhsuite_tools	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0022	persistent	direct	high	794	0.999	GCA_009378225.1_01419
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	34800	35234	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	24400	24834	GCA_009378225_1_22_31	GCA_009378225_1_22_31	-	165673	.	TIGR02801	TolR protein. The model describes the inner membrane protein TolR, part of the TolR/TolQ complex that transduces energy from the proton-motive force, through TolA, to an outer membrane complex made up of TolB and Pal (peptidoglycan-associated lipoprotein). The complex is required to maintain outer membrane integrity, and defects may cause a defect in the import of some organic compounds in addition to the resulting morphologic. While several gene pairs homologous to talR and tolQ may be found in a single genome, but the scope of this model is set to favor finding only bone fide TolR, supported by operon structure as well as by score. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MVTSNRFARRQRPLNSDMNVVPYIDVMLVLLVIFIVTAPMLATGIEVSLPKEQTKPITQADKLPVIVSIQADGNLYVSHKNAIDVPITPDKLDTLLRQMHQDNTDLQVMVNADADNAYSRIMQIMALIQNVGITQVSLLSESVQ*	mmseqs_cdd	nonviral_gene	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0023	persistent	direct	high	434	0.998	GCA_009378225.1_01420
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	35260	35949	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	24860	25549	GCA_009378225_1_22_32	GCA_009378225_1_22_32	-	165673	.	TIGR02796	TolQ protein. TolQ is one of the essential components of the Tol-Pal system. Together with TolR, it harnesses protonmotive force to energize TolA, which spans the periplasm to reach the complex of TolB and Pal at the outer member. The tol-pal system proves to be important for maintaining outer membrane integrity. Gene pairs similar to the TolQ and TolR gene pair often number several per genome, but this model describes specificially TolQ per se, as found in tol-pal operons. A close homolog, excluded from this model, is ExbB of the ExbB/ExbD/TonB protein complex, which powers transport of siderophores and vitamin B12 across the bacterial outer membrane. The Tol-Pal system is exploited by colicin and filamentous phage DNA to enter the cell. It is also implicated in pathogenesis in several bacterial species [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MNESISLISLVIEASVVVKLVMAILLLLSTISWVLIFHLGTKIGGIAKFDERFERWFWTDDIDHQLSVVQAESERAGLELIFYTGFYDQNHQDQDSSLSDDKKVQIVERRLRMALGSEQVHLEKGLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQAESVGLATVAPSIAEALIATALGLFVAIPATMAYNHFATKSNTLYENRSLFCEGLISALVTNLAKKNTASTL*	mmseqs_cdd	nonviral_gene	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0024	persistent	direct	high	689	0.999	GCA_009378225.1_01421
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	36226	40398	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	25826	29998	GCA_009378225_1_22_33	GCA_009378225_1_22_33	+	165673	.	PDB:5XDR_A	Replicative-polyprotein	MHSTDNLPVLAKDRHYLNKLKQKMNSTTGDLKTKCKIRYDAIYERSAEQVANRMDSIPKNLSEKLNHDLPVTAEADTLIQAIRDHQVVIIAGETGSGKTTQLPKLAMMAGRGITGQIGHTQPRRLAARSVAMRIAEELGEPLGQTVSFKIRFTEEGGKHSIVKLMTDGILLAELGSDKFLANYDTIIIDEAHERSLNIDFIMGYLKRLLPKRPDLKVIITSATLDTQRFSDYFAANGKPAPVYIVEGRSYPVEVRYHPLTDTIVSSQDDDAFDDIEDNLPRALTAAVNECFEDARTKGHPDQADILIFAATEAEIRELQEVLMLYAPAHTEILPLFARQSYGEQQKIFAPSGKGRRIIIATNVAETALTVPNIRYVIDLGFARISRYNYRSRIQRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFNSRPEFTEPEILRTNLASVILQMERLQLGDVNAFDFITPPDLRLVNDGRKLLIELGALDDKSFTKTRTKKGRTQLSSLTKIGQQMAKMPIDPRLARMLVAGDAFDCLADILIIVSALAVQDVRERPINKHAQADQKHALFRKEDSDFLFYLELFAALFDQHSTNDNQALSSNARRNFAKKHYLSYARIREWQKTHRQLSEMMAEMGFEINKQKNHQNDVKIDTKKGVRLSLKSGTSHQKSIKQALVGAKALKNDIDNKTSIHYANIHRALLSALLSFVAHKTDTVGEYLMARSQKARIFPASTLHKKGAQWVMAFEVVETSQVYMRTLAKIEPEWIIKAAPNLLKYHYFEPHWSKKAGRVRAYAQISLFGLIVIAKELVNFEQIDLVQAREIFIRDALVANQYGMQMKFLADNANKIKDIERIEDKLRRRDLLVDEESLYQFYDAKIPNHIASRKSFEEFYYDAENKTPNFLHFSDEDVLNEAVDDSREFPESWHLGGVRLPLSYVFDPAADNDGVTVHVPIKALAQVDPVALLWGISGWRYELVLQLLKTLPKEIRRQIVPIPDTCQKIFHQLDASSKMGLLDQLVAALKTLGVQAHAQDFAPDKVEDYLRPLICVVDDKNRVIEKSRDLPKLQARHRKTSVQSIAIEQGVHHHFPNHFNFVKNKHTSGIVMQEFSALKADAAQSAVFIATFTEINAALAEHKKGVLTLIKGHLGAKQKQLTGQIDKAFKLAFAPLGDLEKLKNIVVHATLEACLYDYGPDFDHKPVSQHVDHARAAIAGLITQNNQWLISHLPLDEREFDDCQDLILKNFLLVGQEILRNLKEIYTAWQTARGKLLMLDQEIFGENIEDIEDQLDDLQLANFVYQTDYQHWRQYPRYLQALNIRLDRLQHNLEADLDAVYLLDTHMERLARCVKNPKFAEYRWLVEEYRINLFAQPMKTVQPVSAKRLETLWANLTTQ*	common_virus_hmm	common_virus	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0025	persistent	direct	high	4172	1.0	GCA_009378225.1_01422
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	40661	42157	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	30261	31757	GCA_009378225_1_22_34	GCA_009378225_1_22_34	+	165673	.	5NSW_C	Multidrug efflux outer membrane protein	MSIKCQLVAIDNIIKPCYDKILNFVYFSTMKMPYFLLLGLLLVQQANADYSLLDAQKQLMSSSPAIQASHALYQADVLQAESLQKLHYPRISLNAHAFALQQNSSIPLDNIKEQTAQHINTHFDHRFGSAPDGLLDALHDSTQTALDRLPDHQDVKLRHDGITPNITATMPIYTGGLISSSKNIANLQAQRGKFGLQERISLAKLNLIRHYFNVQLQKQLTDTQQNMLSAMQLHVDNAYKLEQQGFISRGQRMQFEVARNRVQRLYQSTQNQHQNSIYELAVLLGLPHIEPLSTPLFINTQHRPNWQALLKDSQNTPLNQKLKTDTQLADENIALRQSTKKPKIAAVARYTLDDKPDWFAGVAVSYNLFLGIDRDKQIEAAHLQKQAAQLGHEQVNEHITTTMHTAYGEMVLAQKTHALLQQNRQAAKENLRIQTLSFQEGFGTVAGVVDAQSALSQIDSETALNAYRYLLALATLLHHTGTIDDFDDYLSLDDAHKL*	hhsuite_tools	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0026	persistent	direct	high	1496	0.999	GCA_009378225.1_01423
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	42204	43367	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	31804	32967	GCA_009378225_1_22_35	GCA_009378225_1_22_35	+	165673	.	COG1566	Multidrug resistance efflux pump [Defense mechanisms]. 	MTDKTDDVKPDTDGNHSKKQKPHTQAKSKPRPLALFLLLALIGSVLLVIIFGLIQSYGTPQNLPTANAIGSTNEPPKGVIAHLRQKIAGPATFSIQGRVEGETVNISTKLPSRVAAIYVKEGQAVRAGEPLVQLISPEIDAKKQQAAAMLQSALAFQSSTDRGTRQENVDTLYANWQSAKAQATLAEESYRRGEYLYQEGVISRQRRDEMRAAKQSSAQIAQAAQQQYLKAERGRTDELKSSADAQVQIARAAVAEADALDAETMLYAPIDGTVSKIYIQSSELVMPAVPVMSLLDNHPTITISVQENQYSHVHALPKLTGFIPALNKTADFKIVHTDDEGEFATIKNTRQTGGYDIHSFKTKLEPITPIEGLKVGMSVIFDITVLP*	mmseqs_cdd	nonviral_gene	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0027	persistent	direct	high	1163	0.999	GCA_009378225.1_01424
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	43395	44573	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	32995	34173	GCA_009378225_1_22_36	GCA_009378225_1_22_36	+	165673	.	PF12698.7	ABC-2 family transporter protein	MIVRFIRAFCQAFLRELNRLSCNRFDLAMVMIAPLVIIVLFGAMFYHGKAHHLPVALVDEDNSELSHLIYQHIHHNETIKTVLILDNVQDAHHAINRLDVGGYIHIPKDAQNHLVRGENTGIHIAYNQSFFSIGSAISSALSKSTKGGIAKFIQTKHLTGVLPHLSGNMPHVKISVLFNPNLSYEFFLEPFLVAAVLHLLLCCLVAHAIGQEFHEHSVHEWLCHSPFGALFGKISVYVLIISLWHGLWQAWLIGVRGWFVAGSLFVLIIGQLLFYLAYALFGAMVVLKTQNINKSYGILAVYGGSSMSFAGVTLPLNNAPSFTQFWSQIIPFTPFARLQVEQWVIGSPFIITLAHLNSLLIFVLIFAIGSLLLLRRINKTLIAMPNTPKDDS*	hhsuite_tools	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0028	persistent	direct	high	1178	0.999	GCA_009378225.1_01425
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	44573	45673	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	34173	35273	GCA_009378225_1_22_37	GCA_009378225_1_22_37	+	165673	.	COG0842	ABC-type multidrug transport system, permease component [Defense mechanisms]. 	MRRFIKQYLTIWLDVIKDRSIFLTMVLSVVFYGFFYPFAYQAQRPADLPIVIVDEEQSPLTQAIIHTTSHTPNIHVLAVVSDFRQAQMLVQSAKADGILLLPDNLSQSIHHGQTGGVGLYLSSAYFLRTQNIGAGLVSSLQATIIQELGQVTQTRHKPMPELIHQSALFNPLSGYGSYIFPAVAPIIVYQTIVLGLAMLVAGYRQRLWRASACDFLAIYAVALTIGCLSCFYLFGFVFWWHDYPRGGNFWGMMLGVPIFVSCAIGVALLIASWVADGAKVGVLLIFSSVPLFMLTGLAYPLMAMPKFLQPLAHALPTTQGVQMFIQLNQMGVSIQDVWQKMAYLASVAVLCLGVAFWRLRLVNKSV*	mmseqs_cdd	nonviral_gene	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0029	persistent	direct	high	1100	0.999	GCA_009378225.1_01426
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	45998	46117	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	35598	35717	GCA_009378225_1_22_38	GCA_009378225_1_22_38	-	165673	.	PDB:2MXZ_A	L-alanyl-D-glutamate-peptidase-endolysin	MAQASGKLGVNVRWGGAWMVITGKAGTPQEWVKDYRAGG*	common_virus_hmm	common_virus	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0030	.	unmatched_CDS	none	0	0	.
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	46309	46722	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	35909	36322	GCA_009378225_1_22_39	GCA_009378225_1_22_39	+	165673	.	COG1598	Predicted nuclease of the RNAse H fold, HicB family [Defense mechanisms]. 	MHYPVTLTPDTDGFCVTFRDIPEAISQGDTTDEALDMAQDALMVAMEFYFEDNRAVPMPSQAQDGEHLVSLPPSVWVKVLLLNEMIAQNVSQAELAKRMGIVPQSLTRLVDLSHTTKIDTLANAFAKLGKQLQVGLT*	mmseqs_cdd	nonviral_gene	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0031	shell	direct	high	413	0.998	GCA_009378225.1_01427
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	46702	47520	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	36302	37120	GCA_009378225_1_22_40	GCA_009378225_1_22_40	-	165673	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MGGFLLEKFMRVTKTIKEAIHAHAKICYPAECCGLIIDGQYYPCDNVAVNPTEHFEIDPKDFARAESMGQIQAIVHSHPDGNAEPSEIDRVQMSIHGIDWVICAFGYHADGKEYFDVKCHKPKAYQAPLLGREYHHGVQDCYSLVRDYYHRELDIHLPDFHRTDGWWEKEHHLPLYENNFTKAGFIKMQDKNDLQKHDVILCRVGRTHHVNHALIYVGDGKLKSETTPDCVGNALILHHPHGSLSVREIYGDNWQRRTAMVVRHQALSQTNL*	mmseqs_cdd	common_virus	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0032	shell	direct	high	818	0.999	GCA_009378225.1_01428
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	47551	47961	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	37151	37561	GCA_009378225_1_22_41	GCA_009378225_1_22_41	-	165673	.	PFAM:PF11008.7	lipoprotein	MKSIIALTLLFVLTACSTKPIVNYTETVSLVDNNVTSDRSTIVVRRDMGFMGSGCPVEIYLNGVKYARLQSSQSINIHTTAGTHILSAKFTGRGFCQDRLNETEVTIQKNESKYYRLAMNANGDFHIFPTLSTPIQ*	phrogs_hmm	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0033	shell	direct	high	410	0.998	GCA_009378225.1_01429
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	48022	48690	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	37622	38290	GCA_009378225_1_22_42	GCA_009378225_1_22_42	-	165673	.	PFAM:PF05100.11	minor-tail-protein-	MSFNTDIQQTTVQGFITLYELDARKLGGEIYRFHGHNDGVIRWQGQDFHPIAIKADGLEMRSDGRASTPKLSIGDKINGIQGAVSALCRLYDDFARAKLTVTHTLQAYLDSHDAQNYRQQEWYIEQKVSENPSLGIVEFELSNPVDFEGQKIPVRQITTYCNEAVCGRYRGEVCGYTGTARFTHDGKPTDDPTLDRCSGLLAHCKLRDNEGSFCGFPAAGLV*	hallmark_hmm	common_virus	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0034	shell	direct	high	668	0.999	GCA_009378225.1_01430
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	48833	49216	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	38433	38816	GCA_009378225_1_22_43	GCA_009378225_1_22_43	-	165673	.	.	hypothetical protein	MSETTLTELSRTEATVLQSFIAQVDFWKNQHGDKAATIEVIYYPEDDGFEVSNNEPNNGVLKRNRTTAFRADLLAWASNQLRQLQGWDNSQTVTEFSLSYKNDRYGVRAALASEATDKADDGAEQTQ*	.	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0035	persistent	direct	high	383	0.997	GCA_009378225.1_01431
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	49320	49478	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	38920	39078	GCA_009378225_1_22_44	GCA_009378225_1_22_44	-	165673	.	.	hypothetical protein	MKTFTWDIGVEPFTFAPIKGEPAIKVRLDGEISRQKTGGDVWQIGFTLKQVF*	.	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0036	shell	direct	high	158	0.994	GCA_009378225.1_01432
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	49581	53567	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	39181	43167	GCA_009378225_1_22_45	GCA_009378225_1_22_45	-	165673	.	PFAM:PF10145.8	minor-tail-protein	MGGFLLGEFMSNTYRLDIQVNADSANTALGNLKEHFDKIEQSSGKAGVGIDGFSDKADKASKSSKKAGDEAKKASNAQKGLAASFKEATAVAAVGFAAISGTVALSIGKANEFESALAGISKVVDFKSPDGLKDMRAELEALSTQIPLTFTELAQITAAGGQLGVAEENLIAFTKLTADMATAFDISAESAGDSMAKLANIFSKPIEEMGEFGDMINTISNNMPAKASEIVESLTRIGGTAKAFGLAEKEAVALTSAMISLGKAPEVASTAINSMLTTLSTLDVADKDVAASLKAMGLNAQEFGKTIREDGYKAIMQLLEGIEQLPKDQKIGIVTDLFGKNFGDDIVQLAGAPDVLEKINELLAEQQGYIGSMAQEAKNVSSTSEARNQMFLNSLENASAALGEVFKPALDSVRDAVIPVLNAFADFTKENPTFVAAIVGIAGAFTGVLTILGGVLAVLPILASGWAILTAGATVAVAPILGVVAAIAAVVAVGALLYDNWDLIKAKGQEIWAAVSDYASQAWESIQQAWQGIGEWFGRLWGKVKQTFFNWLSQMPKPVQEMVANIGEIFSTIGEVVGAVWDGIANIAKSVWHAITEFVSYAIDKIKPIIKSVLEFFKNAWDGLVSIAKTVWQAVVSVVSHVFDKISGIISTQFEAMKAIFMAGVTIFASIFNAGFEMVKTIFSTAFKVITAVLTGDMQGVKDAIKDGFQKAVDILKKLVGNIVDALKKLGKDLLQVGRDAMQGFINGISEKIDAAVSKAKEMASSVKNAVTGFFDIHSPSRVMKQVGGWISEGLAIGIAYKAPIAAKEAKNLAKSVKNALESDLQKTAEEIFLTKQHIKGNPYAQLTKDIAFGKYGKQDTSRLQKLAQEQILQSNILTLTQQLHEAQQNLANVGLTSIEIMQRQYDETDKSVRASLDLFEQVKKTSQELIDATNRHEATQEFESTLKDIKKQMAIMGSQDPLAEFLYDLQNAEKYAYYTTEQLATLKDEMIKLQAAKDAKQASDGIEESLKDINKQLALLGSNHPLDDFFYELEQTDKYAHATTDEINELIDAIFKLQNAKDALNAKQAFDTLMKDTALANETPAQRLQREYDEKMAVIDRYEQMHSDKLENATSLRQQITERYEQAEKDAKVKNYQEHLTAFAGFLKNTAGEQSKAYRVMFAASKAYALADVGVKMGKAVADAWADPSAVTIWQKLANVAKVSLEQGHVLSMINAISPKGFATGGYTGNMGINQVAGVVHGQEYVLNAKATKRIGVGNLERLNRGDGIGGHVNHINVHVTVNSDGSNVQADTQMGKTMGEAMAKIARQVVIQESKQNGHLDRLYRR*	hallmark_hmm	common_virus	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0037	shell	direct	high	3986	1.0	GCA_009378225.1_01433
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	53600	54436	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	43200	44036	GCA_009378225_1_22_46	GCA_009378225_1_22_46	-	165673	.	.	hypothetical protein	MAQESPTTESLFDFLYLDSIKIRSFYAQLTGFGSLASIKANNALNSSLASEGALGVNAMAKIDAKVNYATGENQSSEKTYDATPTLPREMIDKLDELGFISRELGENSAGNLVLLNGVLSITDIETLQNLLEPTMHFATEEEYKQLYGDRKRQAVKKKLEENKPVVQLIKAIPYALEARLKVGEDMVWMTLNRGEMVGNPHDINLKHGKVLFGEYYVLGVLDAIPNDDMNIDMTTGSFGDVILELSQSLKETMGRNTSSYGITPIAIFRVIRTNQQAK*	.	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0038	shell	direct	high	836	0.999	GCA_009378225.1_01434
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	54399	54581	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	43999	44181	GCA_009378225_1_22_47	GCA_009378225_1_22_47	-	165673	.	.	hypothetical protein	MQDNAKKSDATHHSAQLLRDMFSCLNQAMSRETEKFHQEQKKVKEEINHGARITNHRISL*	.	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0039	shell	direct	high	182	0.995	GCA_009378225.1_01435
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	54739	55530	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	44339	45130	GCA_009378225_1_22_48	GCA_009378225_1_22_48	-	165673	.	PFAM:PF10547.8	P22_AR-protein	MSNISIFNFESTKQVRTAIRNGGDIWFCLPDVANILAISNANPSRFNLSEAGVHKMYISYESGKKQVTFINEPNLYRVIFRSNKAEAVKFQNWVFDEVLPAIRKTGQYRHTISVEQQAQISQAVARRCQSNRRHYQTIYSALHQKFNIPRYSELLASDFDTAMSFIRNYGFNNNGDNNGYEQLYIALTDSVTNIRKYLKLIKSLKGLPFMDENVAQKMYHDGQDTILRIAKIAQALDLQNTQGRPMFEPGRLNYYGGATLIYR*	common_virus_hmm	common_virus	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0040	shell	direct	high	791	0.999	GCA_009378225.1_01436
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	55828	56280	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	45428	45880	GCA_009378225_1_22_49	GCA_009378225_1_22_49	-	165673	.	pfam12869	tRNA_anti-like. This is a family of bacterial, archeael and viral proteins that is related to the tRNA_anti family pfam01336. The major characteristic of families like tRNA_anti is their OB-fold, and many of them bind DNA.	MKKLFKFILIAVIALIGLGIIIGMLSGGDNNNQSASNNTAEPAAPAEPPMMVSATEIASDYDDNEVAADQKYKGKMLEVSGNVARIDSGVGDKAIVQLVGKNEFQTVSAQGNNDFTQYATTLKKGQDIVLVCKGDGEVIGSPQLKNCQPK*	mmseqs_cdd	nonviral_gene	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0041	shell	direct	high	452	0.998	GCA_009378225.1_01438
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	56646	57107	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	46246	46707	GCA_009378225_1_22_50	GCA_009378225_1_22_50	-	165673	.	.	hypothetical protein	MAFDLTLLKKDAKMSAKREIEFDGLELTLEIQASEAFKRAAAEVQKIANTPKKVTKDSLKRDSQDEIGEYEAMLFILGEYCISQWNVTADGEPLAINGDNFLILLDQGFEKDKLTQFITLLFETYASLSQEFEDNKAKLVKKSTTATNGKKSG*	.	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0042	shell	direct	high	461	0.998	GCA_009378225.1_01439
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	57159	57305	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	46759	46905	GCA_009378225_1_22_51	GCA_009378225_1_22_51	-	165673	.	.	hypothetical protein	MEYITIIVDFMKYLIEKHGLFVIWLMVASLITLYKLDMILTAVHLFFN*	.	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0043	shell	direct	high	146	0.993	GCA_009378225.1_01440
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	57389	58297	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	46989	47897	GCA_009378225_1_22_52	GCA_009378225_1_22_52	-	165673	.	PDB:5NGJ_B	Tail-tube-protein	MSSGAFVKTAYAKQTGETLPKTGWKTLPNISNGLTVATELTNSEMLSGSRMAKAGMVTSASVQGDIETELMFGAYDELIAAAFWSEWSAGASPNTLSVGATKTQFAIAKDFSDINVNHVFTGCVVSSFGLSVDTSSLIKLKFGMTGLGYQESKTTSFAKTPTAQADTAKASGLSIGEIKVNGTKLDVCVESFSFELDNQTEVQKCLGDNIYGGNILAMLTNITGSMTIAYSQKAHEMISNQMTGTTLSLELPIKFGNSKYVIKIPKFQVSGEIPSPSGTDLVTVDLSYTVVDESPVIEKHTA*	hallmark_hmm	common_virus	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0044	shell	direct	high	908	0.999	GCA_009378225.1_01441
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	58301	58489	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	47901	48089	GCA_009378225_1_22_53	GCA_009378225_1_22_53	-	165673	.	.	hypothetical protein	MPKNRHRRLLQLYGEINELGAILDAPRPKDIHPHEWVLMKDQIYYMRQYYRVLKQRTDDTEN*	.	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0045	shell	direct	high	188	0.995	GCA_009378225.1_01442
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	58489	58872	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	48089	48472	GCA_009378225_1_22_54	GCA_009378225_1_22_54	-	165673	.	PDB:2L25_A	tail-completion-protein	MNSFHIEQTLLTHIKSWEHFDDIPLAKENRNFKPPDGIWGRVTILGGINQVRSISDKPDILQQGTLVIQLFCPQDLGTVAIKQKADSLANHLQTRRFGRLETLTASIINAGFHDCYQINVSVAWRYY*	hallmark_hmm	common_virus	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0046	shell	direct	high	383	0.997	GCA_009378225.1_01443
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	59243	59443	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	48843	49043	GCA_009378225_1_22_55	GCA_009378225_1_22_55	+	165673	.	PFAM:PF16777.4	transcriptional-regulator	MPKITSTPKSQTQRTADSDAKRGFKTKGLKLHIDDISLIENLSKRLNIPQNQLIMDAVRAYQRQLD*	phrogs_hmm	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0047	shell	direct	high	200	0.995	GCA_009378225.1_01444
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	59440	59673	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	49040	49273	GCA_009378225_1_22_56	GCA_009378225_1_22_56	-	165673	.	PFAM:PF04883.11	tail-component	MRKGRYKNAHHISIGSPSYAETGGGIELVLGLPKHTYPLIYIQNNLPYALRLEHGWSQQAPTGVYGNAFNSAIANLG*	hallmark_hmm	common_virus	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0048	persistent	direct	high	233	0.996	GCA_009378225.1_01445
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	59778	60137	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	49378	49737	GCA_009378225_1_22_57	GCA_009378225_1_22_57	-	165673	.	PFAM:PF12206.7	head-closure-Hc1	MRQEITADIANAFNTDLADAVKDFTAKRVILSDDDWAVNDTQVLSTINYSGRGVFTGFYAHEIDNKTIMQQDTKLICLQSELTDRPQMNDSINQMKVMNISQDPAGICYFIQLRGTNGD*	phrogs_hmm	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0049	persistent	direct	high	359	0.997	GCA_009378225.1_01446
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	60134	60484	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	49734	50084	GCA_009378225_1_22_58	GCA_009378225_1_22_58	-	165673	.	CDD:cd08053	Head-Tail-Connector-Protein	MLDDLPIDTPDKERVLMVVNAYLINKGVKFVGDVPEPIKQAGLELAHAFMNGELLAGRTEGVVTSKSSKAGDVSVSKTYADGADGQAMGQHEMIALALMQPYIKKSYGVNALVGRL*	hallmark_hmm	common_virus	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0050	shell	direct	high	350	0.997	GCA_009378225.1_01447
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	60541	60783	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	50141	50383	GCA_009378225_1_22_59	GCA_009378225_1_22_59	-	165673	.	PFAM:PF10281.8	Arc-like-repressor	MERILYFTDDFSQENQAYAKQHGLIIRNAKAYGAVDYLEQCDKVCGQVPIAYEHLPRFELDDNVSDDDTKPKRTRKPKEE*	phrogs_hmm	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0051	shell	direct	high	242	0.996	GCA_009378225.1_01448
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	60793	61746	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	50393	51346	GCA_009378225_1_22_60	GCA_009378225_1_22_60	-	165673	.	PDB:4AN5_F	Major-Capsid-protein	MAFDLVKFNQETHLVMTETIAQQVDKFNAQSNSTIQLIAKPFKGDFDVASSFKAIANLVRHRDVENGQNNISSARLTQHKNVAVKIAAGTPEILWEAAQYNWTMQNPQLAAIKIGEQLGRATIADMLNTAIKCGVSAIKGNTALVEGDGTTALDFASLTKGASRFGDRSQAIGAWVMHSGALTNLQLKALGNNERLFTYENVSVLRDPQGRLFIVTDCPDLVDESTKHNILGLTEGGLIVHNQNDFNSVIVPKTGTENITNAYQAEWSYGASVKGYTWDMTAGGANPNAGALATPTNWKKTASSDKDTAGVLVVAKA*	hallmark_hmm	common_virus	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0052	shell	direct	high	953	0.999	GCA_009378225.1_01449
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	61749	62483	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	51349	52083	GCA_009378225_1_22_61	GCA_009378225_1_22_61	-	165673	.	PFAM:PF06810.10	minor-structural-protein-	MQLKTDENGNVVVQDGKPVYMYDDGQEIAFDAMQNMAKISQLNAEAKQHREAKEKAETLLKAFDGLNADDAKKALETVKNLDDKRLIDAGEVEKVKAEAKKAFDEQLAEKDAQINKIKQEYNNAVIGGAFARSSFIKDKTLLPSDIVQSSFGSHFTMENGKIVANLGGNPIYSRKNPGELADFDEALETIISQYPHKDSILRGSGASGAGATQAGVGKNTPKSLADCKTDEERVAWLNEQNNGE*	hallmark_hmm	common_virus	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0053	shell	direct	high	734	0.999	GCA_009378225.1_01450
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	62555	63517	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	52155	53117	GCA_009378225_1_22_62	GCA_009378225_1_22_62	-	165673	.	PFAM:PF06152.10	minor-capsid-protein	MKHLINLERFKVHLANKFKTTLNEIDEFLQLVVFRHEISELNYKEFELLIGESKQKLLGFLAGYALELTQDWQELYDYSYTLETKMIDDDKPDTLNMNEPQFDADSPIKLSAQVGVTLNQILAKFGDEQSTKISNAISYAYANGLPNQELVRIIRGTRKNRYQDGILQITTRHAKTIAHTGTAIVANQAKQQFIHDNKDIIKGIKVIATLDLRTSGICRHLDGEIMPIDKAVYPPYHYNCRTSFEIVYDGYQTPKQRASMDGVVKNQSYYEWLKNQPKAYQVEVLGKKKAKLFQESSVDEFKEFDKNLRPMTLDEIKAQL*	hallmark_hmm	common_virus	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0054	shell	direct	high	962	0.999	GCA_009378225.1_01451
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	63890	64186	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	53490	53786	GCA_009378225_1_22_63	GCA_009378225_1_22_63	-	165673	.	.	hypothetical protein	MNEFIIPNSNSVSNDFNYSRTDLDAQEQQIAEFIKKGGKVINLDNSEQPKKKSAKKRDFNNQRINSKMHLVLCYLKRSGKRMTGLQIQEKRHIGNNFR*	.	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0055	shell	direct	high	296	0.997	GCA_009378225.1_01452
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	64272	64511	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	53872	54111	GCA_009378225_1_22_64	GCA_009378225_1_22_64	-	165673	.	PFAM:PF10078.8	transcriptional-repressor	MQIVELRNYLLSMNKQDRIEFAKKCGTTYGQMMQIYRGNRTCHPTLAIEIDKHSKGCVKCDVLSPDTDFNYVRANSESV*	phrogs_hmm	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0056	shell	direct	high	239	0.996	GCA_009378225.1_01453
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	64638	65360	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	54238	54960	GCA_009378225_1_22_65	GCA_009378225_1_22_65	+	165673	.	PDB:2FJR_A	Repressor-protein-CI	MTPEIRLKNLTLVLEKIEKEKGLNSFAKIAKEYDLNASYLSQLMNGNRQIGERSARSLEKKLKLEKFSLDNCPLQSNINPDFESITEWDNGAPLDDDEAEIPFYKDIAFACGHGAVNGDAPLEGRKLRMGRRTLSNLGVMPINAYAVTACDDSMTPYVQDGDTIYIDKGRKEVKDGRIFAIRFGELCLCKRLYRLPDGGVRIVSDNAAEFPEQVATKQQISDGEFEVIGWVWSVSRLERW*	common_virus_hmm	common_virus	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0057	shell	direct	high	722	0.999	GCA_009378225.1_01454
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	65412	66308	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	55012	55908	GCA_009378225_1_22_66	GCA_009378225_1_22_66	+	165673	.	PF14337.6	Domain of unknown function (DUF4393)	MTAETFHLIPAITGAVSGAASVGLLNGPLQTLQDIWFVVYGHKWHYKVESIKAQQAMNIQAMQNNIQTGIEKIPANALKDPNVAIIGPALEASRFHMNEENIREMFANLIVSAMDERKDGQVHHAFVEIIKSLSPLDAKNLEYLSQSGDAPIVNIVKEASYGFHMLHQHVFLGNRQVLDPNLITPSIDNLARLKLIDVTYTEHLTHEPVYDPFYHSALYQEKVSELGKELKLRRLDISKLQDLTRPVELDGKVLNKDERTEQIELINKELESKIEIQKGIIKLTAFGKNFLSVCSPTT*	hhsuite_tools	nonviral_gene	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0058	shell	direct	high	896	0.999	GCA_009378225.1_01455
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	66337	66543	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	55937	56143	GCA_009378225_1_22_67	GCA_009378225_1_22_67	-	165673	.	.	hypothetical protein	MALAINIVLGANTVHFSRNIQKATQNAKKYLQGFALLAYMQAADKDKSVQDFLIIDPNPMTDEQKSLY*	.	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0059	shell	direct	high	206	0.995	GCA_009378225.1_01456
GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote	cenote	CDS	66606	66992	GCA_009378225.1	NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225.1_NXCG01000006.1	GCA_009378225.1|NXCG01000006.1	GCA_009378225_1_22	GCA_009378225_1_22@C1	56206	56592	GCA_009378225_1_22_68	GCA_009378225_1_22_68	-	165673	.	.	hypothetical protein	MFGIKLLHSDDFIKSASSFGCFLAIMDKQTNKNHVYNLSTQVQRFELIDIDQVANLANSVQNGAISATVGTLFVGAGVLPALVALSIGAGLPNRTKDAYVCHIEFDDGKSAILQLSKHKYQQFLKHIA*	.	hypothetical_protein	C1	56592	10401	66993	GCA_009378225.1|NXCG01000006.1@region_10402_66993@tool_cenote_CDS_0060	shell	direct	high	386	0.997	GCA_009378225.1_01457