core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	101839	102036	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	1	198	GCA_009378535_1_1_85	GCA_009378535_1_1_85	-	173067	.	NF033499	excisionase Xis. Members of this family are excisionases such as Xis from the Gifsy-1 prophage of Salmonella enterica subsp. enterica serovar Typhimurium str. LT2.	MKKYLTSNEICEIFGICKMTLNRWEKRYPHGEPFPRPVMGGGLGGGVKRYLSQEVHAWELKHTAK*	mmseqs_cdd	nonviral_gene	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0001	shell	direct	high	197	0.995	GCA_009378535.1_00087
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	102115	102330	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	277	492	GCA_009378535_1_1_86	GCA_009378535_1_1_86	-	173067	.	.	hypothetical protein	MKKYTDGTRVVEARPMLDTEYFRDFDGDPNYQNSEPKTGMFVVFENNGLRMSYAFYPSQEKFFEKFSEIEE*	.	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0002	cloud	direct	high	215	0.995	GCA_009378535.1_00088
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	102330	102800	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	492	962	GCA_009378535_1_1_87	GCA_009378535_1_1_87	-	173067	.	.	hypothetical protein	MIKQTTFKAGDLVYYPSCGTEIYKLQESNHLNFPLEIKHGQIWVLFRSNDRVNSMSDMTQLFHATEDNCYLLSKLYGIEFEKPRTRQVVEHLLKTHKYVACYTSDFDETPSPDSVKNFITHIRDGVALPFVDDECNMWRYAVPFDIKTGEVITEID*	.	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0003	shell	direct	high	470	0.998	GCA_009378535.1_00089
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	102802	103131	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	964	1293	GCA_009378535_1_1_88	GCA_009378535_1_1_88	-	173067	.	cd22268	double-psi beta-barrel fold of endolytic peptidoglycan transglycosylase RlpA and similar proteins. Endolytic peptidoglycan transglycosylase RlpA (rare lipoprotein A, RlpA) is a lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. It adopts a double-psi beta-barrel (DPBB) fold and is one of four SPOR-domain containing proteins in Escherichia coli (including FtsN, DedA and DamX) that bind peptidoglycan (PG) and are targeted to the septum during division. It directly interacts with the divisome protein FtsK in vitro, and deletion of the rlpA gene partially bypasses the requirement for functional FtsK, a large, multi-spanning membrane protein that facilitates double-stranded DNA translocation during division and sporulation in E. coli and Bacillus subtilis, respectively. In Pseudomonas aeruginosa, RlpA contributes to rod shape maintenance and daughter cell separation. The separation of daughter cells requires extensive PG remodeling. It has been suggested that amidases and RlpA work in tandem to degrade PG in the division septum and lateral wall to facilitate daughter cell separation.	MNKLILLLILVASQAQAHTATWYGGKFHGRLTASGERYNQNALTCASNKYKFGTRLKVTNTANGKSVICRVNDRGGFGKYGTTLDLSKGAFKKIAPLSQGKIKVTIRRL*	mmseqs_cdd	nonviral_gene	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0004	cloud	direct	high	329	0.997	GCA_009378535.1_00090
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	103124	103252	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	1286	1414	GCA_009378535_1_1_89	GCA_009378535_1_1_89	-	173067	.	.	hypothetical protein	MKPKQLKRLKNRHRQQRLSLFLRQACPKSKGVNYLKQESKRE*	.	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0005	cloud	direct	high	128	0.992	GCA_009378535.1_00091
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	103369	105045	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	1531	3207	GCA_009378535_1_1_90	GCA_009378535_1_1_90	-	173067	.	PDB:1RIF_B	DNA-helicase	MYKLRDYQARVKRELYDWFAKHQKGFPIVDACVGAGKSIIIADLCQDMINQASDTRIVMCVASRELCEQNMQKLLAIWPDAPAGICSAALCSKDTDSQIIFATIGTLARRVDELGTVDVMIIDECHNINNANTGMYRKMIETLQDTTCPHMAVIGFTGTPFRGNGVWLWQGKDPIFEGVASRVTMDELLKLGYLAPLVVEPMEAKIDTADVKITAGDYNSKQLSELLDDKDLARACVDDLYIRGQGRKKWLIFCHSIEHANLVLNEVRSFDVTAEMVIGETPSDSREKILKAYKLPHDHSDAINILINVGVLTTGFDAPMIDLIALLRPTKSPVLYVQMAGRGMRIAEGKTDCLWLDYTSTTYELGPVNTIRGRNASPKGETAKGEPCKHCSKCGEKNPVYMSECLSCGEPFSPNQSEKAVGNQSGNAEIIDDGNAKWANVTGLGYVRHTSRKSGKSTLRVDYYTDLQIHPISEYICIEHEGYAFDKACQWWREHNLGPVPTSIDDALHLLHASSLNRPAKIEVKRDGKFWKVIGREFGKVSEIYSKPPSAMIDDMPF*	rep_hall_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0006	shell	direct	high	1676	0.999	GCA_009378535.1_00092
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	105032	105988	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	3194	4150	GCA_009378535_1_1_91	GCA_009378535_1_1_91	-	173067	.	PDB:3SZ4_A	Exonuclease	MTDISQYTIDPTVSAIYKHYQLSRFEGARTYLGASIIGKACARALWMDFRQVKAKMFDGRLYRLFETGHLAEPRFIQNLRDVGVTVFDVDASTGEQWSVSFCGGHFRGHADGVAIGIKGAEKTWHLLEFKTHSEKSFNELKRKGVKTTKPMHYDQMQVYMHGLELTRAYYMAVNKNTDELYGERIKYDADHAKSLIERASRIIYADVPDAPLSDKPSWYECKWCEYQSFCYAGDWELPDVNCRTCIHSTPIADAAWQCERTTPATLINTANPCEHHRFIPHILPNLEFERYANDKVFYRDRSGLVHINQSKGSFDVQA*	common_virus_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0007	shell	direct	high	956	0.999	GCA_009378535.1_00093
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	105985	106191	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	4147	4353	GCA_009378535_1_1_92	GCA_009378535_1_1_92	-	173067	.	.	hypothetical protein	MGNPIKLAKSLLGKERILVKEIEGKVNNVRLVDEILQKNGYRKFFGSTSQFKGWIINSKYLLCTEYVS*	.	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0008	shell	direct	high	206	0.995	GCA_009378535.1_00094
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	106193	106669	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	4355	4831	GCA_009378535_1_1_93	GCA_009378535_1_1_93	-	173067	.	PFAM:PF05037.12	single-strand-DNA-binding-protein	MATLNFGFTQEEVQAAQNDSYAALPAGNYVAQVERSEVKQTKDGTGSYLSLGFKVMDGDYAGRVLFGNITLTNKNSQAQEIGRKQLIKLSTACGLGHLQDSEQLHGIPVMIKVSDSRVYEGEKQNDIKDYKPVQQIQQSGFVQSPPAQTASNKPWVRG*	phrogs_hmm	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0009	shell	direct	high	476	0.998	GCA_009378535.1_00095
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	106672	107355	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	4834	5517	GCA_009378535_1_1_94	GCA_009378535_1_1_94	-	173067	.	PFAM:PF13479.5	AAA-domain-protein	MAIKLTNARAATAKNGIKVCVYGQAGAGKTVLCATTPNLEKTIIISAEAGLLSIAEADIDVIEIKSLQDLQDAYKWLTEDPQGLSYEWVCLDSISEIAEVILNDAKRNSKDPRNAYGEMQEKVETAIRAFRDLPRNVYFSAKMESYQDDVGVVRYQPMLPGKRLPAGLAYFFDEVFLLKVEKDSDGNPIRWLQTQPDTKYHAKDRSGKLSIQEPADLSIIQQKILGV*	common_virus_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0010	shell	direct	high	683	0.999	GCA_009378535.1_00096
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	107345	107731	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	5507	5893	GCA_009378535_1_1_95	GCA_009378535_1_1_95	-	173067	.	.	hypothetical protein	MTIKELATQWLDAKRAEQQAAAKRLEIERDLIKHVGVTNEGVVTYQGDVFTIKTTGKLTRTLDDTAVARHWDSLPAEVQACIKWKPALDLKNFRALESMRDDLAPTLHQYLTVKPAKPSVSVEFKNGN*	.	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0011	shell	direct	high	386	0.997	GCA_009378535.1_00097
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	107761	107907	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	5923	6069	GCA_009378535_1_1_96	GCA_009378535_1_1_96	-	173067	.	.	hypothetical protein	MRSTIQTVIFIVIMMFMLKGCLYAFDHECQIQEELGRQYYEEYTSLKP*	.	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0012	shell	direct	high	146	0.993	GCA_009378535.1_00098
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	108158	109210	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	6320	7372	GCA_009378535_1_1_97	GCA_009378535_1_1_97	-	173067	.	.	hypothetical protein	MANTDNKFIISDEQSAILVLEQLLQDDVDIDISLVQFKGWGDFSIRLTGEKFDNSLTPTVMRGIIELQQALYRSYALAVYNDENPNRLTKQERQQLELRVEIKKGSSLINIDVDQAIGDILTAAVSKMSSFQLVGLVIVMGILFFGKTVWVRHVEKSQAIKEKELENENMKAVLEEMNRQTQILQEGNQKTLDVLEKTIEKIPQASQLHHIANQAQHELLRSTKYADTVNIDHAIEMTGESAEFFTQSARKTWQNVRLDGKYRLLKVDSTNVRERKVHLENVATKDVFWATLTDESMDKKHINNLSNAEWSLHPVGLQILAKSLDGKLKDAQIIGVEQVDTSISFKSDSN*	.	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0013	cloud	direct	high	1052	0.999	GCA_009378535.1_00099
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	109242	109964	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	7404	8126	GCA_009378535_1_1_98	GCA_009378535_1_1_98	-	173067	.	PDB:2FJR_A	Repressor-protein-CI	MTPEIRLKNLTLILEKIEKEEGLNSFAKIAKEYDLNSSYLSQLMNGNRQIGERSARSLEEKLKLEKFSLDNCPLQSNINPNFESVTAWDDSAPLDDDEAEIPFYKDIAFACGHGAVNDDVTHETRKLRMGKRTLSNLGVMSENAFAVTARDDSMTPYVQDGDTIYIDKGRKEIKDGRIFAIRFGELCLCKRLYRLPDGGVRIVSDNSDEFPEQIATKQQVIDGEFEVLGWVWSVSRLERW*	common_virus_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0014	shell	direct	high	722	0.999	GCA_009378535.1_00100
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	110090	110329	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	8252	8491	GCA_009378535_1_1_99	GCA_009378535_1_1_99	+	173067	.	PFAM:PF10078.8	transcriptional-repressor	MQIVELRNYLLSMNKQDRIEFAKKCGTTYGQMMQIYRGNRTCHPTLAIEIDKHSKGQVKCDVLSPDTDFNYVRANSESV*	phrogs_hmm	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0015	shell	direct	high	239	0.996	GCA_009378535.1_00101
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	110414	112897	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	8576	11059	GCA_009378535_1_1_100	GCA_009378535_1_1_100	+	173067	.	PFAM:PF08273.11	primase-helicase	MNDYMISQRFKRFQEVLLSDDVITFQTFSNNADNKDISLTCQLHGRFDDVQDNLHALNNRGAGIYFTANKTDGKGRKRENITAVRSLFVDFDIPDSERVARLMALDLPPTLIVESSKDKHHAYWVADGIALDDFTACQKQLISFFTAQGDAPDKAIHDLARVMRLPGFIHQKTKNGVTTDAFTSRVVYVGKRYDKVDLMAWLATMDVVVEQNTPLFQASQKTSYTHTGSASDYVRQQANGRWQYVLARLGYDVGDGRHKPCPHCGGRDRFRFDNHNIKAGDGGWICSQGMGETTGGDGLSFLMDHVGMQPKDALNAVADALGVDLPDERDSVNIDEFISNSQKTDETEADSEPAIPVLENYKTRQTPSELFHLPINPDIDRELTEFIQSHNEQAPAEMILIAKLAILNTLAGRRYLSESNNPTTMNYMVLAGTGAGKNIIRNSIEALLRACNFDHLLSGSGSTSSSAVISSLMTAPNQIQIIDEFGQALKAARASNNNFAKESYAALMEVYGNYNSSIRAKNYSNLADKKKREQTEPPVEVLCPHITLVTMATPMQVINAINTEDLENGFLNRFTVVYVNDKEMSDDDLDNFCITRQKMPKTPSMQLINFCQALRNGDTGNLSGYTIDVYNERPEFKIINWHTEAEDYVNEYYRTIKRQQKESQDEIYNALAQRRVEQMMRLATTLAAADSVSKDTPPVTEPKHVIYAIGFIEYFGLMAHEFFRENLSDNQFTQLRQIILDSLLGIKNKADAERGLTMRELGRMNALFAKTPLHFRAPVIQTMLADGDLLYVEIKAKFGRGGSRARNAFILPQHFNESVMKPIAFKY*	rep_hall_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0016	shell	direct	high	2483	1.0	GCA_009378535.1_00102
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	113131	113472	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	11293	11634	GCA_009378535_1_1_101	GCA_009378535_1_1_101	+	173067	.	PFAM:PF06356.10	Endonuclease	MSKYKNKKTVFDNITFDSKKEAERYKVLKSMQADGLINDLECQPKFMLIPSQYFETIGRRERGVDYVADFRYKDNLGQIIVEDVKSAITAKDKVYRIKRKLVKYFYDVEIIEV*	common_virus_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0017	shell	direct	high	341	0.997	GCA_009378535.1_00103
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	113469	113654	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	11631	11816	GCA_009378535_1_1_102	GCA_009378535_1_1_102	+	173067	.	.	hypothetical protein	MRYYYSPSTDQYAKVLGEDVKNNVVIAVIDGKQQTINWDEFVGQFNQLVDVNEDSNTNQQR*	.	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0018	cloud	direct	high	185	0.995	GCA_009378535.1_00104
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	113659	113907	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	11821	12069	GCA_009378535_1_1_103	GCA_009378535_1_1_103	+	173067	.	PFAM:PF11753.7	nucelotide-kinase	MMNKLKQTENDAVNHPSHYTSDPSGIECIQITRHRNFNIGNAIKYLWRAGLKDGNSDIQDLQKAVWYIQDEIKRIKGRYERI*	common_virus_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0019	shell	direct	moderate	245	0.984	GCA_009378535.1_00105
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	113894	114265	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	12056	12427	GCA_009378535_1_1_104	GCA_009378535_1_1_104	+	173067	.	PFAM:PF06530.11	anti-termination-protein-Q-like	MNEYREWGKWVSDNPDCLKTKSIWLMVERSKLPANRRVYVMTDDRGLQIDKGVSELARYCPVSANVFMMFYVWGWSHEKIAVRYLSAIGYRGKSRASRHDVRSALIKAESFLAGLLHKLYSFT*	phrogs_hmm	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0020	shell	direct	high	371	0.997	GCA_009378535.1_00106
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	114819	115274	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	12981	13436	GCA_009378535_1_1_105	GCA_009378535_1_1_105	+	173067	.	PFAM:PF05119.11	Small-Terminase	MKGRKPKPTAIKELTGNPGKRALNKNEPKFAQITEIEPPVWMTDTAVTMWRTVMPELLATGVLTVADVHNVEAFCMSYSRWREAEQEVERYGLVIMDDNGKLNKNPALTIINEAKTQMMKFGSLLGLDPSSRTRLTGTANSEPIANPFADL*	hallmark_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0021	shell	direct	high	455	0.998	GCA_009378535.1_00107
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	115271	116965	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	13433	15127	GCA_009378535_1_1_106	GCA_009378535_1_1_106	+	173067	.	PFAM:PF03354.14	Large-Terminase	MTYPNVQKALDYIHAVLSGEIIANKYIKLACQKHLDDLKNSETNPDYPYFFDPAKAEKVAKFIQLLPHTKGKWASKGEKIALEPWQIFACCLPFGWIKRATGFRRYTKILIFVCRKNGKSAIAAGIGNYMFCADDEFGAEVYSGATTEKQAWEVFRPAKIMVERTKALKDFYGIEVNASNMARLADGSRFEPIIGKPGDGSSPSCAIIDEYHEHKNNDLYDTMETGMGAREQPIMLVITTAGSSIGGACHQMVRDAEKMLDRVMDIPDLWAVLYGIDKDDDWTSEIALKKANPNMDISVSAEFLQARQRDAKMSAAKQAIFRTKHLNEWVGAKNAWLNMAKWANGAKRLPLSALTGRPCFIGLDLATKIDMVALILLFPPTADDSNYHVHGRYYLPDVRVLEELDSNTERYRAWDADSLLTLTMGEVVDFDAIKDDLREFYGRFDVQEVAYDPWQATQLAQEMEKEGMVMVELRHTVQNMSEPMKELEALVLQKRLAHGDCPILTWQASNVVATLDKKDNIYPNKERAENKIDGMVALIMALSRAIVHTDTGNVDEFFDNMIIA*	hallmark_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0022	shell	direct	high	1694	0.999	GCA_009378535.1_00108
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	117042	118244	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	15204	16406	GCA_009378535_1_1_107	GCA_009378535_1_1_107	+	173067	.	PDB:8CEZ_K	Portal-Protein	MNDENWWSRFYARLFGGGKRLDKGSEVAPFNSMHMPSGTAVTAETALKLSAVWACVRLRSQTIASLPLHLKSVSKELATDHHLYRILHDSPNADMTASEFWESVIVSLDLWGNAYVYITRLGGRVVSLDILDPSITVVKRNRDGDISYKVGEDIFGAEDVLHIKGFTMDGLVGLSPIRYQAGVMGAQIDANNAASHTFGNNLKAGGFLQTDNILNSEQRQKLRNNLEYFSKPENAGKYMVLEAGMSVSSSGVKMNPSDAQLLETRYFGIEEICRAFGVPPQLIGHTDKASSWASSLEGMNLGFLTYSLRPTLERIEQAIRKKLLSPSERSQYSPKFSVEGLLRADSQGRANFYTTMLQNGVMTRNEVRALEDLPPMAGGDSLTVQLNLTPLEKLGQDHEN*	hallmark_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0023	shell	direct	high	1202	0.999	GCA_009378535.1_00109
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	118234	118884	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	16396	17046	GCA_009378535_1_1_108	GCA_009378535_1_1_108	+	173067	.	PFAM:PF04586.16	prohead-serine-protease	MKTKSINFEPSIVKDDGFFSGYCNVFDVVDSYGDSVQKGAFVKSLAKFEVRGKMPPILWQHDRAQPIGVWTALKEDEHGLYGEGKLLIDDVPKAREAHALIKAGVIDGLSIGYRVEQADYDNTKEVLLLKELDLFEISVVTFPANDASTVTVVKSALAQGQLPTLSEFEKFLRDAGFSKSQATAIASHGLRQLLGEPAELKDALQIIKSITGDINV*	hallmark_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0024	shell	direct	high	650	0.998	GCA_009378535.1_00110
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	118877	120058	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	17039	18220	GCA_009378535_1_1_109	GCA_009378535_1_1_109	+	173067	.	PDB:3QPR_G	Major-Capsid-Protein	MSDMTKQLATELAKATDYVKGLGEELTGRLEKGESHLSTLKGDVDEALKSMGDVKARLDAVEQKQARRAQNQEPEKSLGERLFESEAFKQFADNPTAGNRAKLNVKATITSATTDTSGAAGALVQTQRLGGIVATPDQRLRVRDLLMQGTTDSNALEYVRETGFTNSAAAQQNEGDKKAQSHIKFDTQSVSVRTLAHYVKASRQILDDASALASYINGRLMYGLKLVEDRQLLNGDGENGNLKGIIPQATAFADKATLSTYTIIDQLRLAQLQAVLAEYPASGIVLNPIDWAKIELEKDADNRHIIGLPQGTANRTLWGVPVVETTAMGTGKFLTGAFNLGAQIFDRQQAAIAVATENEDDFVRNLVTILCEERLALAVYRPEAFIYGDLVAK*	hallmark_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0025	shell	direct	high	1181	0.999	GCA_009378535.1_00111
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	120123	120359	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	18285	18521	GCA_009378535_1_1_110	GCA_009378535_1_1_110	+	173067	.	.	hypothetical protein	MAEYEVLKQHYGDKQYYEGDIRQLDDDFTAKRLIEFGLIGKAHANKKVQSKAKKVPNNKAEPVLENKGDDSDDTEDNT*	.	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0026	shell	direct	high	236	0.996	GCA_009378535.1_00112
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	120337	120624	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	18499	18786	GCA_009378535_1_1_111	GCA_009378535_1_1_111	+	173067	.	PFAM:3JVO_G	Head-Tail-Connector-protein	MTQKITLEMVKHQCRIDHDDEDDLLMHYLNAALIHASNYIDGLLDESNLAVQQAVLLLVGHWYDNREAVNNDYQTPQSIPFGFEALLQPYRNLGV*	hallmark_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0027	shell	direct	high	287	0.997	GCA_009378535.1_00113
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	120624	120950	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	18786	19112	GCA_009378535_1_1_112	GCA_009378535_1_1_112	+	173067	.	PDB:2KZ4_A	Head-tail-adaptor	MQAGKLKDRVSFMQHLQSRSQTGATKRTWSVIDTVWGQFTPVSAKDVIAGKAAGVEILARLKIRYRDDIKRNMRVVCRGKTYDIIGEPLADNKSGKEYLTLLLQGAEQ*	hallmark_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0028	shell	direct	high	326	0.997	GCA_009378535.1_00114
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	120947	121459	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	19109	19621	GCA_009378535_1_1_113	GCA_009378535_1_1_113	+	173067	.	PFAM:PF04883.11	tail-component	MKLIGAEELGKKLKQAREEITNKQAGSALYSSLMYASLPMYKYVRSQAPMTKAPYRRYMSYGQGPGKKRAKRGTGKYEIQESGLYHKSIKRRRLTRGESANLDGAAIAIYVAEGSGKTHGSAYYWFFNEYGTKYQAARPIFRPAFDSGAEDAADRFKNKLGERIDKIMGG*	hallmark_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0029	shell	direct	high	512	0.998	GCA_009378535.1_00115
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	121459	121806	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	19621	19968	GCA_009378535_1_1_114	GCA_009378535_1_1_114	+	173067	.	PFAM:PF05657.10	tail-component	MIASKRIFGLLGELVNDRVYPLFVPETADSTPPFMVYTLVSNVPDNTLDGATGHEWVGVQIDIYAADYDETIALAQEAVKRLNTIKPSEYGGVVYVHDDGLYRAIIEYEFWQTII*	hallmark_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0030	shell	direct	high	347	0.997	GCA_009378535.1_00116
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	121816	122262	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	19978	20424	GCA_009378535_1_1_115	GCA_009378535_1_1_115	+	173067	.	PFAM:PF16461.4	tail-tube-protein	MAETNTVENAKDSFYQLFVSATNTSSSFKKIERLTSCGVPSEAKVLDDITATDDRRQVNAVVDYKENSEVEFEYVLLPDDETHKLLQKSFESGRELYFQLKFMEATSESRQFKGIIAELTTDAEDTKKKLRKKGRITITGDTTKELTA*	hallmark_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0031	shell	direct	high	446	0.998	GCA_009378535.1_00117
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	122308	122637	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	20470	20799	GCA_009378535_1_1_116	GCA_009378535_1_1_116	+	173067	.	CDD:pfam16459	Tail-assembly-chaperone	MSNLKNDLLKALSNLGTPIAYDIDGIGTVHIKKLTVEEQGKLMHDKGDDVKSSLRLVTFSVCDEEGKRVFAENDIKDLGKMHADTLTKLIEAIREVNGFYAKVDDLKKD*	hallmark_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0032	shell	direct	high	329	0.997	GCA_009378535.1_00118
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	122688	122960	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	20850	21122	GCA_009378535_1_1_117	GCA_009378535_1_1_117	+	173067	.	PFAM:PF06223.11	tail-protein	MTVAELASKMSYVEFLEWQAFHDIDPIGGYRGDIQAAMIAASMGGGKLSDYMIIDPNPMTDEQRQEYEQQREAQKARIQVAEMIAMFNSM*	phrogs_hmm	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0033	shell	direct	high	272	0.996	GCA_009378535.1_00119
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	123020	123199	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	21182	21361	GCA_009378535_1_1_118	GCA_009378535_1_1_118	+	173067	.	7MUC_IN	Legionella, Dot/Icm, Secretion, T4SS, TRANSLOCASE	MNKFLSVLSAFATVFVLSSTPAMAKNTPCSGKKGGVSHCSNGKFVCKDGSISASKKVCK*	hhsuite_tools	nonviral_gene	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0034	shell	direct	high	179	0.994	GCA_009378535.1_00120
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	123208	123660	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	21370	21822	GCA_009378535_1_1_119	GCA_009378535_1_1_119	+	173067	.	.	hypothetical protein	MKKLLKWFGIIFAVFLGIGALAVALETPEQKAEREAQAAEEKAQREADKAEREHLEAQKAAEKAEKEKQKHLQSLQSELLAYCQIEIKKYLHNKKSMDTDYKTVRIWESDIGTYRVGFEFNATNLYGAEVTHKAVCEFDKDKKLINKEVA*	.	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0035	cloud	direct	high	452	0.998	GCA_009378535.1_00121
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	123956	124837	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	22118	22999	GCA_009378535_1_1_120	GCA_009378535_1_1_120	+	173067	.	PFAM:PF10547.8	P22_AR-protein	MQTQISIFNFESTKQVRTAIRDGGDIWFCLPDVANILAISNANPSRFNLSEAGVHKMYISYESGKKQVTFINEPNLYRVIFRSNKAEAVKFQNWVFDEVLPTIRKTGRYVAKSTVSDRTPLRQAVSMLVSRCGLDYGTAYTMVNQYMGTQHIDEIDLADLPRAIAYTHSLMIKPDAKEQGEFQITCHQATSQAMNYLHGLHAEIKRLGGVAPSLDIDEDEIARAIITRMVQGKRFMVNLDYWNTKPNVSIIDQKSWVVQSDDIAKIIADPAGVPKDVLPSIIQAALKRSGLTV*	common_virus_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0036	shell	direct	high	881	0.999	GCA_009378535.1_00123
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	124997	125179	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	23159	23341	GCA_009378535_1_1_121	GCA_009378535_1_1_121	+	173067	.	.	hypothetical protein	MQDNAKKSDATHHSAQLLRDMFSCLNQAMSRETEKFHQEQKKVKEEINRGARITNHRISL*	.	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0037	shell	direct	high	182	0.995	GCA_009378535.1_00124
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	125142	125978	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	23304	24140	GCA_009378535_1_1_122	GCA_009378535_1_1_122	+	173067	.	.	hypothetical protein	MAQELPTTESLFDFLYLDSIKIRSFYAQLTGFGSLASIKANNALNSSLASEGALGVNAMAKIDAKVNYATGENQSSEKTYDATPTLPREMIDKLDELGFISRELGENSAGNLVLLNGVLSITDIETLQNLLEPTMYFVTEEECKQLYGDRKRQAVKKKLEENKPVVQLIKAIPYALEARLKVGEDMVWMTLNRGEMVGNPHDINLKHGKVLFGEYYVLGVLDAIPNDDMNIDMTTGSFGDVILELSQSLKETMGRNTSSYGITPIAIFRVIRTNQQAK*	.	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0038	shell	direct	high	836	0.999	GCA_009378535.1_00125
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	126036	129707	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	24198	27869	GCA_009378535_1_1_123	GCA_009378535_1_1_123	+	173067	.	PFAM:PF10145.8	minor-tail-protein	MAVVSKLQIVLEATTTAFDRGLKQASENLNAFAKKNEEIHNRLERFNRKHEQALSTMRGIGAASAAAMAAVGYGIKSSVNEAIKFESALAEVKKVVDFDSPEGLVNMRRELENLSTQVPIAFDGLAKIAAAAGQSGIAADEIVKFTEAAAKMGTAFDISAEEAGQAMAEMRTAFKMSQLEVETLADKINYLGNNSPNAAANIMQVVQTIGPLGEIAGVSSDQIAAMAASLTGVKPDVAATGLKNMMIQLTKGDSLAKSAKTSFTQLGLSYTNVAKGMQKDSVGTINKVLEAIKKLPAEAQTASINAIFGAEALPVVSQLVTGTETLTKHLQAMGDATKYAGSMNAEAANINATAAAQMEMFKNATQNAKAAIGEAFIPALAGIVEKLTPTINSIKEFAQENPKLISTITAVTGVILSLGVAIGAIGLAVPVVTTAFGGLSDIGKLLGNAISGISLPMLGIGVAIAGLIVIGVLLYKNWDTIKAKATEIFNNLPEPIKTAIDNIKSYFSGMMATLEVVLDTAKAFWHGFSTIPLAAFEVIKASVSFGMNAILSIIKAVLTGIAAAFNFGFSIAKAIVETALGVIKGIINGDMNAVVNAIKNGLKTAGNAFNQLRTDVVTTIKQLGTDLYQAGKDAVDGLVKGINDKISSAVAKSKELASGVKNAVTGFFDIRSPSRVMMQVGYWIADGLAVGIKKGAAKTKKEAKKMAEDIKEAIDDERINTAKSVYKLQQELKGNPYADFLTDIAFGKYGDAKKFLKSKDYAQISQLKEAEKRLQNIISINDELDGLRESVRSFGMDEIERLEHAYKTSQKYYSATEDDMLEHIGLLKEIQNLEFGNKIDEIREQRNLIGKTEVEQLEYKLKYYREYRHISDVLKKAMIDEMKLKEFETLQSEKQLDLEKKLHMLRGGTETSWLLKQSQFTEEQKKQIEQLTKQIELTEQLAELREKLKDKSVFDVKDAVKSGSFGEGLGGVLEGITTLGNINAGAIENYAKIEEVFAEEKAKLEKARQVDLENEAYYYEQSKVLAEQYAEAKEKLLLNATQSTLGGITAITKSAFGEQSKLYRTILAFENGVAISRSIIAIKTAMALASANPFPANLGAMATIASQTANIISAIKSVVMPVGQAHDGIMSVPKSGTWNLEKGERVLPRHTAKALDDKLASMSNGGGQVVINQHITINADGSHDVRDDSQNQMGQALKTGVLAIVHGEMRQGRSIYNFVKNGR*	hallmark_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0039	shell	direct	high	3671	1.0	GCA_009378535.1_00126
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	129718	130047	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	27880	28209	GCA_009378535_1_1_124	GCA_009378535_1_1_124	+	173067	.	PFAM:PF05939.12	minor-tail-protein	MKTFNWRMNMGASAEVHHAITKTQFGDGYTQRVSLGINNQRTDWSGSKTGDWQTVILPIKTFLDEHKGVIPFLWTNPHGQTKKYVCENYEISQKKGNFWEIGLKFEQVF*	hallmark_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0040	shell	direct	high	329	0.997	GCA_009378535.1_00127
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	130140	130526	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	28302	28688	GCA_009378535_1_1_125	GCA_009378535_1_1_125	+	173067	.	.	hypothetical protein	MSEPTLTELSRTEAQVLQSFIGQVDYWKIQHGDKAATIEITYYPEDDGFEVSNNEANNGVLKRNRTTVFRADLLAWASNQLRQLQGYDNSQTVTAFILSFKDNRYGVRAALASEAKDKADDTKAPNEA*	.	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0041	persistent	direct	high	386	0.997	GCA_009378535.1_00128
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	130580	131293	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	28742	29455	GCA_009378535_1_1_126	GCA_009378535_1_1_126	+	173067	.	PFAM:PF05100.11	minor-tail-protein-	MSLNSDFQKATVDGLITLFELDASKLGAGILRFHGHNHERNDGVITFRGKAYNPQALNVTGLEMRSDGRASTPTLTLANNIAGVQGAVSAYCLQFNDFATAKLRVITTLAKYLDPINFDNGNPTASDECKEQLWFVEQKTSENAQQVTFELSNPIDLEGQKIPVREITNYCHWAVVGKYRGEECGYTGAAMFDEHDNPTDNPIMDKCGGRMKSCVCRFGKNKPLPFGGCPASSLIGS*	hallmark_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0042	shell	direct	high	713	0.999	GCA_009378535.1_00129
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	131302	132090	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	29464	30252	GCA_009378535_1_1_127	GCA_009378535_1_1_127	+	173067	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MKLTKQLKADIISHALDCYPAECCGLIVDKKYIPCTNKATDDEQFILCPKDFAKAESIGEIQAIVHSHPDGGVLPSDLDKLQIELHGVPWVIVAVSKQEYADEPAFGVYEPCGYRPPLLGRSYIHGVQDCYSLVRDYYSRELDIHLPDFERTDTWWEHENYEPLYEQNFEKAGFVAMDKSVGNLQKHDVILCRVGRTHHVNHALIWLGDDGALKSETTPDCVGNALILHHPYGRQSVREIYGKGWADRTVLVVRHQSMQEQS*	mmseqs_cdd	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0043	shell	direct	high	788	0.999	GCA_009378535.1_00130
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	132087	132662	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	30249	30824	GCA_009378535_1_1_128	GCA_009378535_1_1_128	+	173067	.	PFAM:PF06805.11	tail-assembly-protein-I	MKTIILHGILAKKFGKTFKLSVNSTKEAMRALCVQLSGFEAFMMNAHRQGLRFAVFHDKHNVGENELEMNHTAKIIRVVPVVEGSKKEGVLETVIGAVLVVAGVVATGMGFAPAGAALIGAGVGLMVGGISQMLMPKVDAQDNNQDGNKANKGFGGAVTTIAQGNPVPILYGEREIGGFIMSASQLPEDML*	hallmark_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0044	shell	direct	high	575	0.998	GCA_009378535.1_00131
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	132677	138511	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	30839	36673	GCA_009378535_1_1_129	GCA_009378535_1_1_129	+	173067	.	PFAM:PF13550.5	tail-protein	MNIHGSKKGGGKQRQPIIAPDSAQSKTFIKILYGLGEGEIAGLADGYKSVYLDDTPLQNDDDEFNFPNVKVDFRTGTNDQEYIDGFADVASETNVGVELKHGTPWVKSFNNLDLDALRVRIKWGALRQQNRENGDVLGVKIDYAIDVQTDGGGWVQALTTAINAKTSNAYERSHRIDLPKAQTGWAVRVRRITPNSTSELVSDTMYISAITEVIDLKLRYPNTALLGLRYDAEQFSNVAKMAARCRGLIIKVPTNYNPITRTYDGLWDGQFKMAYSNNPAWVYYDLCTATRYGLGGRLTEYMIDKWSLYRLAQYCDQLVDDGMGGQEPRFTVNVYIQSAEGAFELLSKLAGVFRAISYWDGTSIVLDADIPQDSIYSFSRANVIDGIFEYTGTRARDRHTVAKVAWDNPANHFKTEYEYVRDEKAIAKFGVRVADIQAWGCTSKGQAQRAGLWALKSEQLETRMVTFKVGLDGYIPAPAKVIEISDELFAGRATGGRVLAINDKKTIITLDRTITAKAGDTLVINGNDGTSQRQQISVVNGDNVTVTKPFGDISEQNVWVLDSQDLATMKFRVLSVTADDNHQFTITAVQYSPAKYDAIDHGAYTPERPISVINPSVQAPTKSVNLSSYHTVNQGVTVTTLVIGWEQVTGAVKYTVQWRKDNGNWQTLPPTGTNSIEITGVYAGQYEARVTAISAFGQASLATHSNLTQIQGKQGKPPRPINLTALGVLFGMNLGWGFVRGSDDTNYTEIQVSPDGRSNIATLGTFAYPTNKHEITGLQGNLRQFYRARIVDKLGNTSDWTDWVSGTTSADAEKVLDILSGQISQNHLDQSLRTPIGKIGTLESKISGINSKIPTIESNINSFNSKIPSINKIPTIESNINSVNSKIPAIESKISGINSKIPTIESNINSFNSKIPSINKIPTIESNINSFNSKIPSINKIPTIESNINSVNSRADTINSTLNNANNRLNEVVQSITNIDTRTQWQTLGATSLNSLTEQGKYYLESSFNTNTPLSGWQYATVDKARNGDRITQTVWNDSTKTYTRTKTGDTWSAWVESVDKSQLDNTANQLTQSIEQTSTQIRNELGTKANIDSVTGAIRDINALQADKNAKTQEIANLTQTVNGHTSSIRDLGVTTGELSQKYSQLKTTSDTANSEITAIKQTQSGQATSVERLRSEMADKASSADLQSVQQSLASKEQALTEQITTAKSELGGRITQISDETRTLSDANRTIGERINRLDSEIYSPNLLRDGDTPKTSSNWNIDFPITETLQAGRRVYISLSGASGLTSVAVYNSSPAGAAKVGDLTNDGGVWRGEFDWVSYGNNNVLQFYREPRSSAQTVTASLTTTNGSKIANLERTLTTTNQSLSERINTVESSMSGNTSSINTLSQSLTTKEQALSRRINEVNSSVSGNTSSINTLSQSLTTANRALTEQITTAKSELGGRITQISDETRTLSDANRTIGERIDRLDSELAGADSISDNLLVNSNRTLVTGAYLIATYRISETLKNGDKVRLTVNAPQLGINRTGFMAYNSNSAGGSKLADISESQGNIYTAEFEWNVGTGGNNEVWLYHDASNTRSISTITSVSLQKITTGSGLASIKSSVANLERTLTTNNQSLSERINTLQTTVNGQTASIQQHAQSLNGLSAQWTLKVQTNGIVSGIGLASNNGVSDFAIRADKLYVASPQGDKKPMFTVTTRPTTLNGTTVPTGMYLNGDLIASGTISGDKIQANTQITAPNIRGGSINIGNNFSVDSQGNLNANSGVFRGQVFADKITGQIDVESLKSSAVALGYDTYISDNYHASEPHQFDKTFKASYPSHGSITQSLGFNNENIGSIMYEMRVFCKRAITVKQKLHTVDDKLYCYVNGSSAFGYHSVHNGYDDEDEIPLPFGRGRINTEISLSLRQGLNTIQFVLNNSGGGICQVILIGDFIDNNIIKFA*	hallmark_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0045	cloud	direct	high	5834	1.0	GCA_009378535.1_00132
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	138519	138893	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	36681	37055	GCA_009378535_1_1_130	GCA_009378535_1_1_130	+	173067	.	.	hypothetical protein	MIDTQGLHAPFLISWFGVWLFAFLGGWASAFIKINEIDNRLQYPFIAKPLIGTVAGVAMAMIINGQAEPPAVSLAFWSFVGSICSTPIITGFLVFISDQKRQNELYKSAQNKFIPWSNKEKKDE*	.	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0046	shell	direct	high	374	0.997	GCA_009378535.1_00133
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	138886	139212	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	37048	37374	GCA_009378535_1_1_131	GCA_009378535_1_1_131	+	173067	.	.	hypothetical protein	MSNLLIINALICSVGFFVGVHTFIKHLKAFSSEKTPVVEAWLVAVGMLAWSVLLYASFDEPIITRLEVFSRLLFLIYWVGGILKVQKQCIKIRRHLSKRKAQINLYKP*	.	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0047	shell	direct	high	326	0.997	GCA_009378535.1_00134
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	139239	139784	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	37401	37946	GCA_009378535_1_1_132	GCA_009378535_1_1_132	+	173067	.	PFAM:PF08291.10	Peptidase-M15	MSSIKHIQSQIGTTADGIWGDKSKQALKSAINDGKIITITKNISLNELLASNTATARKIDNMPSQQVLQNLIDASVNLYQPVREILGVPIIITSGYRCPALNKAVGGSSTSAHMSGFAIDFRSPRFGTPKIIVPHIVRKLKEKGIGFDQAIIEYPKSPRSWVHLGYKHPNGKQRGSSFVIG*	common_virus_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0048	shell	direct	high	545	0.998	GCA_009378535.1_00135
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	139863	140039	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	38025	38201	GCA_009378535_1_1_133	GCA_009378535_1_1_133	-	173067	.	.	hypothetical protein	MKNMQTLNRELKMAELERIKMEAEKLRAETVKLQKEANWFPWLSLAVALIALIVALVK*	.	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0049	shell	direct	high	176	0.994	GCA_009378535.1_00136
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	140153	140770	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	38315	38932	GCA_009378535_1_1_134	GCA_009378535_1_1_134	-	173067	.	PFAM:PF10078.8	transcriptional-repressor	MMFCATLSQTFNFAKIMTYKIIIDGATSQAITDKATAYANYRAVCRDYDNKPKKVELVHDDSELSAKAPNMMLLDNNDVFSANDVLCQAMQTLGINIKGLKDKIKTSELKLSNSRIDGWIRPSDDRHFVQMHNDELVAVLKLLLSDTVATIKSPENIVALRKKLGLTQSELAEKFGLKSGFRQVARWESGEQEMPDAKWKKMQDF*	phrogs_hmm	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0050	shell	direct	high	617	0.998	GCA_009378535.1_00137
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	140767	141672	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	38929	39834	GCA_009378535_1_1_135	GCA_009378535_1_1_135	-	173067	.	PDB:1Z19_B	Integrase	MPTFAQLYDKHFAYYATTVDASTASTYDKSMRKYVLPRLADMPIDEILPAHVLDLHAKIAKVSPFTAHRSIQRINRIFDYAVTITGDLEYNKIARIGRYTAKPPTHGWRFVDLAHVPKMLKDIDKLKGVGDTIMRAFWLMVYTGLRRSEVVYARKEEFDLSNGLWTIPASRMKINSNGDHIVPLSEQAIKLIEPLLHANTHSDYVFVSPHAGTEIISTWSLYQVLVKAGYQHKQTLHGFRKIFSTHAHTSRLWTIDAIELTLSHKIGGVRGVYNHANMLDERRELLQWWANEVDKWRGVKR*	common_virus_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0051	cloud	direct	high	905	0.999	GCA_009378535.1_00138
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	141727	142188	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	39889	40350	GCA_009378535_1_1_136	GCA_009378535_1_1_136	-	173067	.	.	hypothetical protein	MLNKSIVANLVSTIGFELDLTDAQTKINISNPAELKRFIAEYDHSDNKDAQEAIDELKAVIAEHETKAIGVSKDELKQVYVMLKERQLHPRGEFDKAGRFYLDDADLVDVRPPSTKYPYSQMSAGRTAKFVKAMAEKYKVQTIEELISLFKKA*	.	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0052	cloud	direct	high	461	0.998	GCA_009378535.1_00139
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	142335	143528	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	40497	41690	GCA_009378535_1_1_137	GCA_009378535_1_1_137	-	173067	.	PDB:1Z19_B	Integrase	MLTEVWLKANNGKPRDKVTEIADRDGMSVRISPKGKIVFQLRYRFNGKLKRFDLGVYPLISLKQAREKSLSAKTQLLHGKDPKLEEQIAKQAYINADTFYECFLQWYDKSAVITKKQASDIKRSFELYVFPVIGSLPINDITLQQYIIIIESISEKTPGIAERILTNTKQMLKWAKKREIVTHNILADLELSDFNLVRVKRKRYLSDDEIILFYKALYGSKISYRNRLATELALMFGCRGIELRRAKITDFQDSVWTVPPENHKVGHITQQPLIRPILPPMQALIDEAIAISRSEYLFDRRGEMLEKNAFLDITTGLIHWIDRHCGVQLPRFTFHDLRRTARTNFSAFTSRDIAEIMIGHTVGNMQQVYDHYNYLPQQTAAYEQWLKKLAELKQIAL*	common_virus_hmm	common_virus	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0053	shell	direct	high	1193	0.999	GCA_009378535.1_00140
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	143753	144235	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	41915	42397	GCA_009378535_1_1_138	GCA_009378535_1_1_138	-	173067	.	COG1607	Acyl-CoA hydrolase [Lipid transport and metabolism]. 	MSGFCTLNIAPTDLTMTVLMTPDMANFSGNVHGGTILKLLDQVAYACASRYAGGYVVTLSVDQVIFKEPIYVGELVTFLARINHVGTTSMEVGIRVEAENIQTRTARHTNSCYFSMVAVDQAGKPVPVPPLVVDDSLAKQRYEMAKKRKELRIKLQQHDW*	mmseqs_cdd	nonviral_gene	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0054	persistent	direct	high	482	0.998	GCA_009378535.1_00141
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	144258	144578	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	42420	42740	GCA_009378535_1_1_139	GCA_009378535_1_1_139	-	173067	.	pfam04358	DsrC like protein. Family member DsvC has been observed to co-purify with Desulfovibrio vulgaris dissimilatory sulfite reductase, and many members of this family are annotated as the third (gamma) subunit of dissimilatory sulphite reductase. However, this protein appears to be only loosely associated to the sulfite reductase, which suggests that DsrC may not be an integral part of the dissimilatory sulphite reductase. Members of this family are found in organisms such as E. coli and H. influenzae which do not contain dissimilatory sulphite reductases but can synthesize assimilatory sirohaem sulphite and nitrite reductases. It is speculated that DsrC may be involved in the assembly, folding or stabilisation of sirohaem proteins. The strictly conserved cysteine in the C-terminus suggests that DsrC may have a catalytic function in the metabolism of sulphur compounds.	MNHLPSLDDDGHLKNHNDWTPKIAQRLADTIGVTLESEHYQIIGEVRAFFETYHHSPSTRPLIKHLMARLPNLDISNQKLQQLFKTGLVARHVNRIAGLPKPPNCL*	mmseqs_cdd	nonviral_gene	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0055	persistent	direct	high	320	0.997	GCA_009378535.1_00142
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	144612	144917	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	42774	43079	GCA_009378535_1_1_140	GCA_009378535_1_1_140	-	173067	.	.	hypothetical protein	MKLLIHINTDSELISYEAIALALTLATFDHDIQIELGEKVLVLLNNPKSRIYGMIQSLALYDLPKAYHNFQAVDALDKVIQLSLQSGSLGLDDYDSKLYFK*	.	hypothetical_protein	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0056	persistent	direct	high	305	0.997	GCA_009378535.1_00143
GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote	cenote	CDS	144927	145304	GCA_009378535.1	RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535.1_RCJP01000004.1	GCA_009378535.1|RCJP01000004.1	GCA_009378535_1_1	GCA_009378535_1_1@C5	43089	43466	GCA_009378535_1_1_141	GCA_009378535_1_1_141	-	173067	.	TIGR03012	sulfur relay protein TusD/DsrE. The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulfur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulfide moiety, delivered by the cysteine desulfurase IscS to TusA, then to TusBCD. The activated sulfur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulfur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulfur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulfur flux, such as oxidation from sulfide to molecular sulfur to sulfate. [Protein synthesis, tRNA and rRNA base modification]	MILLLITSSPHSHAGKLAVEYATKQLHLGNQISVFFYGDGAYTANRLMWQTADVPSVAKQWQALSDNHGIALPVCVSTALARGVCDAQNAARHGLIGDNLLPPFSLVGLSELAMMIDDTTSVVQF*	mmseqs_cdd	nonviral_gene	C5	43466	101839	145305	GCA_009378535.1|RCJP01000004.1@region_101840_145305@tool_cenote_CDS_0057	persistent	direct	high	377	0.997	GCA_009378535.1_00144
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	79381	80640	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	1	1260	GCA_009378535_1_11_73	GCA_009378535_1_11_73	+	340519	.	COG4536	Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains [Inorganic ion transport and metabolism]. 	MSDNFLQHYSVMPRPRTQNLANLSFVSIAVFTVSVAAVFIPSTAFAAFELGGTPTNLALLIFFICLSLVVSFLCSISEATLLTMTPSYIDTLEEDNPKGAALLKSVKVDHIEKSISAILTLNTVAHTLGSLGAGAQAVIVFGNAWFGVFSGVMTLIILIGTEIIPKTIGTVYWRRFAMPVAYYVRTINVALLPIIWVTEKISRMLTRGNQEIGFNRHEFLALANQGESLGQMSEMETRIIKNSLALGMINVEDILTPRSVVSAFDENMTVGDVFASYPKLPFSRFPIFDEDLDNATGFILKSDLLIAKANQEIHTPIKQFRRDINFVFAKMKLFDLLDLMLKEQVHIALAVGEFGEVKGLVSLEDVLETLLGLEIVDEFDRVDDMQILARQLMDRRMARLGAKLEEDTPFDEKSAGSNK*	mmseqs_cdd	nonviral_gene	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0001	persistent	direct	moderate	1226	0.973	GCA_009378535.1_01354
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	80728	81333	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	1348	1953	GCA_009378535_1_11_74	GCA_009378535_1_11_74	+	340519	.	PF13474.6	SnoaL-like domain	MAYSFIDKYIEYKGWFMKYSTRSVLKKVVAASMLTAAIRSVIQFTGKSFGKGASIGLFIGMIGVQSLITTNAYAISEQDVSRYASSMSSAANAQNIAQISRLIADDAIISLSRGGKTTSLDKEGYLQLLQKSWAKSSGYRYRINVADVVVTGDQARAQIVTTENWTQDGRPVTINTASRATFSQVGNHVVLLRSVSQVTVD*	hhsuite_tools	hypothetical_protein	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0002	persistent	direct	moderate	557	0.919	GCA_009378535.1_01355
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	81528	84398	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	2148	5018	GCA_009378535_1_11_75	GCA_009378535_1_11_75	+	340519	.	PDB:5EMI_A	Cell-wall-hydrolase-autolysin	MKKHTKSSISTQILKPLSLAISSCILVACSSTGTPTKPVSQTPKPIPQAKPSQQINISSGNTNLGNTKTGADVDVLDVQMLDTLEALLQATDMSMVEGDELAIQRYGNLWDRVRRGYRINEMTNARIEAQKSWFYTRQTYLDRLTARASRYLHHTVAEAERRGIPSELALLPIIESSYDPTATSNAAAAGLWQFIPSTGRIYGLNQSATYDGRRDVIESTRAAYDFLTSLYNQFGSWELALAAYNAGPGRVSRAIKANQDQGLPTDYWSLKLPTETMNYVPRFLAVAQIVRSPNTYGINLPAIANHSHFRTVPVNYGVSLSEVATVTGLSVSELRLLNPALLNFTVDEIGPNRIVIPDSLPNQIDNQLASLKGYGFGGDYIATAPAQSITYVVPKSGAAANTSSQQELIAANTLPTTIAQVTPNNTIVQEPALSKSEINLIAAEIQKTSPEVPAISPQDGNIQLNAVQTGQSVLDARGETKMLSFADGPKTQAITPPAQQPVQVSITPPAQPVQITVVSPTPEPISQPKPQLPPVTASIPVVSSPPVLVAPPPSRPRPEPASRPKPKPESYTVRAGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKPQPVSVQNPSRQSTSTANTNPATHKVSAGESLTAIARRYNISLHALAKENGLSVTDGVLIGQTLKLPSDAKTANTTMANTSSSPSVNKPESYTVRAGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKPQPVSAQQPSQAAQSTKNNQSTATHRVQSGESLTAIARRYNISLHALAKENGLSVTDGVLIGQTLKLPSDAKAESSTPSRLGNTKNNSTRTPANTNIGITENYTVKAGESLTMLSNRFGVAIGDLAAANGLASNANLRIGQTLKVPKLTTTYTVKAGDGLIALARRYGISTQELAKMNNLEPTADLRIGQVLTVPNK*	common_virus_hmm	common_virus	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0003	persistent	direct	high	2870	1.0	GCA_009378535.1_01356
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	84558	86390	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	5178	7010	GCA_009378535_1_11_76	GCA_009378535_1_11_76	-	340519	.	COG1274	Phosphoenolpyruvate carboxykinase, GTP-dependent [Energy production and conversion]. 	MTAKITAPDFVRHQALIHWVAEIAALTKPAAIEWCDGSEEENQRLIDLMIKNGTMIKLNEDKHPNSYLAFSDPTDVARVEDRTYICSKEEIDAGATNNWVEPSQMRTKLNNLFDGCMAGRTMYVVPFSMGPLGSHIAHIGIEITDSPYVVVSMRKMARMGKEVYDVLGTDGEYVPCVHTVGSPLTEGQKDVAWPCNDDKYIVHFPETREIWSYGSGYGGNALLGKKCLALRIASAMGREQGWLAEHMLILGVTNPQGKKHYIAAAFPSACGKTNFAMLIPPAGYEGWKVETVGDDIAWIKPSEDGKLYAINPEAGFFGVAPGTNTKTNSNCMSTLGSDVIYTNVAVTDDGEVWWEGKTKEAPNNLTNWKREPHTGEERAAHANARFTVSAKQCPSIDPQWENPEGVPISAFIFGGRRADTVPLVSEAFDWVDGVYKAATMGSETTAAATGQQGVVRRDPFAMLPFAGYNMADYFNHWLQMGENLGKKAEAAGNQLPKMFKVNWFRRDENGNFVWPGFGQNMRVLQWIIERCEGTANAVRTPIGLVPTYDDINWDQSDFTKAQFELVTSQDKDAWIKELESHAELFDKLGERMPAALKAHNAKLKADIEQV*	mmseqs_cdd	nonviral_gene	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0004	persistent	direct	high	1832	0.999	GCA_009378535.1_01357
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	86688	88106	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	7308	8726	GCA_009378535_1_11_77	GCA_009378535_1_11_77	+	340519	.	PDB:3BH0_A	Helicase-ATPase	MAKSKSSYICQNCGAIYGKWAGQCTDCGEWNTLVEAPNTSLPHHHKSKTTTVPRKTANYAGAVSAVMTLDHVGVTLETRMPTGIGEFDRVLGGGLVAGSVVLIGGDPGIGKSTILLQTAINMASSNSLAGSALYITGEESLSQVAMRAVRLGLPTDRLRVLAETNVETICMALTAEQPAIAVIDSIQTLFTEAIQSAPGGVAQIRESAAVLTRYAKQTGTALFLVGHVTKEGALAGPRVLEHMVDTVLYFEGESDSRFRMIRAIKNRFGAVNELGIFGMTDTGLKEVANPSAIFLSRYDKPIAGSVVMVSREGTRPLLVEVQALVDTAQAQPRRMALGLDYQRLSMLLAVMHRHGGIHTSGMDVYVNVVGGVKVMETGSDLAVLIACASSIKEKPLPVRLCVFGEVGLSGEIRPVPNGQERLKEAMKHGFTHAIVPRANAPATNHPQFKNIQIIAVDRLDEAIYQAFEITAG*	rep_hall_hmm	common_virus	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0005	persistent	direct	high	1418	0.999	GCA_009378535.1_01358
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	88148	88867	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	8768	9487	GCA_009378535_1_11_78	GCA_009378535_1_11_78	-	340519	.	COG1118	ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]. 	MSIKIQNIHKTFGDFVALGDISIDISTGELTTLLGPSGCGKTTLLRIIAGLENADNGRIYFDSIDVTDIPVQHRGIGFVFQQYALFRHQTVAQNIAFGLTLLPRNTRPSANTIDRRVDELLDLVQLSHTKTRYPHELSGGQRQRVALARALATNPKLLLLDEPFGALDAKVRKSLRDSLKDIQREIGITSILVTHDQEEAQAISDKIVIMNHGQIEQIGTPSKLFAQPSSDFVVDFLGL*	mmseqs_cdd	nonviral_gene	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0006	persistent	direct	high	719	0.999	GCA_009378535.1_01359
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	88960	89799	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	9580	10419	GCA_009378535_1_11_79	GCA_009378535_1_11_79	-	340519	.	COG4208	ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]. 	MANTSSYSYQKNPATRDKPWVKWSLIGIAVVFMGVMLVVPLVSVFYEALKEGWQAYQAALLEPDALASIKLTLITAVIILPINTIIGVALAYLITRHQFHGKFVITTLLDLPFAVSPVVAGLMFVLVFGANTRLGGYLESMGIQVIFATTGIVLATLFVTFAFIARELIPLMQAQGDSEEQAALTLGANGWQMFWKVTLPNIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTMPLMIEIAYNEYAFTLAFALSSLLALLALVTLVAQGLMSHKK*	mmseqs_cdd	nonviral_gene	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0007	persistent	direct	high	839	0.999	GCA_009378535.1_01360
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	89851	90729	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	10471	11349	GCA_009378535_1_11_80	GCA_009378535_1_11_80	-	340519	.	TIGR02139	sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]	MPNQPMPLKNRARRVMPFFGLSMGISIFALGLLVILPFLMMILTTLQMGFGDIMRTIREPQVFAAIKLSLSMAMLATLTNLIFGTLVAWVLVRYEFWGKSFLNALVDLPFALPTAVTGIALATLYAPNGLFGQWFTRLGILLFDEPIKIAFTPIGIWLALVVVSFPFIVRAVQPVLAELSVEFEEAAAVMGAGRLTTFCRVILPEISPAMLIGAGMMFARATGEYGSVIFIAGNIPMQSEILPLIIVSKLEQFDVAGAACVSLFMLLISLVVLFTINFIQWKLSARLGTKTN*	mmseqs_cdd	nonviral_gene	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0008	persistent	direct	high	878	0.999	GCA_009378535.1_01361
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	91067	91495	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	11687	12115	GCA_009378535_1_11_81	GCA_009378535_1_11_81	+	340519	.	.	hypothetical protein	MMKNKWMRGLAILALSLPTVTYAKTAAPKSPEAPKESLTQEEQMAIDFCDFSAYGVMHIAAEHQSGVTKSEALTNHDERMAKLRDIDPETATMLDQYWKGAIDRIFQESVQKTDAEKQAFVMGVGESSFYSCLDQVLKTPKN*	.	hypothetical_protein	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0009	persistent	direct	high	428	0.998	GCA_009378535.1_01362
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	91526	92701	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	12146	13321	GCA_009378535_1_11_82	GCA_009378535_1_11_82	+	340519	.	PDB:1OYW_A	ATP-dependent-DNA-helicase	MTETTVKNFDDLPLSEPILKAVQALKFDQLTPIQAQILPHTLANQDAIGQAQTGTGKTATFLITIIESLLKRPFQADEIRYLGEPRALVLAPTRELAQQILADCRELTRFSQLYNLCITGGADFDKQLEQLHKRPLDILIGTPGRIIDWVNKGELFLDRIEVFVLDEADRMLDMGFIPDIKRIVRHMPSNTERQSLLFSATFNQDVMNLAYRWLHQPAFVEIAPESKTNQAIDQQFYLVTEREKMSALKQILADDSVKKTIIFANRKDQVKRLYDYLRRHHKVTMLSGDVAQQKRERYLQRFKDGEVNVLVATDVAGRGIHVDDVTHVINYTLPDMPDDYVHRIGRTGRAGLSGVSISFVGENDAFNLPALERHVDQKFKLNQFEFLDEHK*	common_virus_hmm	common_virus	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0010	persistent	direct	high	1175	0.999	GCA_009378535.1_01363
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	92715	93890	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	13335	14510	GCA_009378535_1_11_83	GCA_009378535_1_11_83	+	340519	.	COG0635	Coproporphyrinogen III oxidase or related Fe-S oxidoreductase [Coenzyme transport and metabolism]. 	MYPDLLDPAHIPLSLYIHMPWCIKKCPYCDFNSHALPSQAPFESYIEALLSDAVSQQSLVSNRQIDTVFIGGGTPSLLPIESFKRLFDGLRLIYDFAPTCEITLEANPGTLEHSPFDEYLTVGINRLSIGVQSFDHNALTALGRIHNPDQASNAIRAARIAGFDRVNADLMYGLPNQNSSKAVNDIQTAIDAGATHLSWYQLTIEPNTTFYRTPPQLPDEEIMAEIETLGQSVLTKHGFYNYEVSAWHGPNDAPCRHNLNYWQFGDYLAIGAGAHGKLTLKNHPNHQDGIYRYQKSRLPKDYLAFENAPKMVNFERIADENLPFEFMMNALRLKDGVSTDMFETRTGLLISTIDNEMLPLQHQGLMVLDPLRIAPTHLGFRYVNHLVSQFI*	mmseqs_cdd	nonviral_gene	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0011	persistent	direct	high	1176	1.0	GCA_009378535.1_01364
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	93985	94125	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	14605	14745	GCA_009378535_1_11_84	GCA_009378535_1_11_84	-	340519	.	COG5510	Predicted small secreted protein  [Function unknown]. 	MKKVLIASIAAVVVLTGCNAIKGLGKDVSKAGEAVSDTAQKVEKKI*	mmseqs_cdd	nonviral_gene	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0012	persistent	direct	high	140	0.993	GCA_009378535.1_01365
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	94373	94918	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	14993	15538	GCA_009378535_1_11_85	GCA_009378535_1_11_85	+	340519	.	COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ribosomal structure and biogenesis]. 	MSQFSDALIHIVLFSPKIPNNTGSIIRLCANTGAQLHLVKPLGFELDDTRLKRAGLDYHEYATLSVHGNWQETKSALKSLGVERIVAMTTKFSRPFYEYQFKLDNDQHKVALVFGSETDGLPDDVRADIGANHWLRLPMLPDSRSLNLANSVGICLYEVWRQLGFVGDVGQSVGYHKPTSR*	mmseqs_cdd	nonviral_gene	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0013	persistent	direct	high	545	0.998	GCA_009378535.1_01366
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	95142	95507	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	15762	16127	GCA_009378535_1_11_86	GCA_009378535_1_11_86	+	340519	.	PFAM:PF12206.7	head-closure-Hc1	MGLNVEISTDIAQAFDTDLADAVKDFTGRRVILSDDDWAVNDTQVLSTINYSGRGVFTGFYAHEIDNKTIMQQDTKLICLQSELTDTPQINDSINQMKVINISQDPAGICYFIQLRGTNGD*	phrogs_hmm	hypothetical_protein	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0014	persistent	direct	high	365	0.997	GCA_009378535.1_01367
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	95497	95844	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	16117	16464	GCA_009378535_1_11_87	GCA_009378535_1_11_87	+	340519	.	PFAM:PF04883.11	putative-tail-component	MGIKWHKKMTVEPIADKIDDIYRKFAIDCYNNVIALSPVDTGRYRRSHHISIGTKSLNENGGGVELILGLPKHTYPIIYIQNNLPYALRLEHGWSQQAPTGVYGNAFNSAIANLG*	hallmark_hmm	common_virus	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0015	persistent	direct	high	347	0.997	GCA_009378535.1_01368
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	95841	96041	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	16461	16661	GCA_009378535_1_11_88	GCA_009378535_1_11_88	-	340519	.	PFAM:PF16777.4	transcriptional-regulator	MPKIVASPKTQTQIQKDSNARRGVKNKAFTLKLDDIELIKSLSKRLDIPQNQLIMDAVRAYQRQLD*	phrogs_hmm	hypothetical_protein	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0016	shell	direct	high	200	0.995	GCA_009378535.1_01369
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	96378	96806	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	16998	17426	GCA_009378535_1_11_89	GCA_009378535_1_11_89	+	340519	.	PDB:2L25_A	tail-completion-protein	MNRPSSDRRFFIGRNMNSFHIEQTLLTHIKSWEHFDDIPLAKENRNFKPPDGIWGRVTILGGINQVRSISDTPDIMQQGTLVIQLFCPQDLGTVAIKQKADSLANHLQTRRFGRLETLTASIINAGFHDYYQINVSVAWRYY*	hallmark_hmm	common_virus	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0017	shell	direct	moderate	383	0.893	GCA_009378535.1_01370
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	96806	96994	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	17426	17614	GCA_009378535_1_11_90	GCA_009378535_1_11_90	+	340519	.	.	hypothetical protein	MPKNRHRQLLELYGEITKLGAILDCPKPKDIHPHEWILMKDQIYYMRQYYRVLKQRTDDTEN*	.	hypothetical_protein	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0018	shell	direct	high	188	0.995	GCA_009378535.1_01371
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	96998	97906	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	17618	18526	GCA_009378535_1_11_91	GCA_009378535_1_11_91	+	340519	.	PDB:5NGJ_B	Tail-tube-protein	MSSGAFVKTAYAKQTGETLPKTGWKTLPNISNGLTVATELTSSEMLSGSRMAKAGMVTSASVQGDIETELMFGAYDELLAAAFWSEWSAGASPNTLSVGATKHQFAIAKDFSDINVNHVFTGCVVSSFGLSVDTSSLIKLKFGMTGLGYQESKTTSFAKTPTAQADTAKASGLSIGEIKVNGTKLDVCVESFSFELDNQTEVQKCLGDNIYGGNILAMLTNITGSMTIAYSQKAHEMISNQMTGATLSLELPIKFGNSKYVIKIPKFQVSGEIPSPSGTDLVTVDLSYTVVDESPVIEKHTA*	hallmark_hmm	common_virus	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0019	shell	direct	high	908	0.999	GCA_009378535.1_01372
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	97990	98136	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	18610	18756	GCA_009378535_1_11_92	GCA_009378535_1_11_92	+	340519	.	.	hypothetical protein	MEYITIIVDFMKYLIEKHGLFVIWLMVASLITLYKLDMILTAVHLFFN*	.	hypothetical_protein	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0020	shell	direct	high	146	0.993	GCA_009378535.1_01373
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	98180	98641	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	18800	19261	GCA_009378535_1_11_93	GCA_009378535_1_11_93	+	340519	.	PFAM:PF08809.10	Tail-assembly-chaperone	MAFDLTLLKKDAKINAKREIEFDGLELTLEIQASEAFKRAAAEVQKIANTPKKVTKDSLKRGNQDEIGEYEAMLFVLGEYCISQWNVTADGEPLAVNGDNFLILLDQAFEKDKLTQFITLLFETYASLSQEFEDNKAKLVKKSTTATNGKKSE*	phrogs_hmm	hypothetical_protein	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0021	shell	direct	high	461	0.998	GCA_009378535.1_01374
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	98804	102964	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	19424	23584	GCA_009378535_1_11_94	GCA_009378535_1_11_94	+	340519	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MFVMFVSIIKAYCQGCGYLSLFLCLMIYGLMSITKNPRLGGFIGFNGEFMSNTYRLDIQVNADSANTALGNLKEHFDKIEQSSGKAGRGLADVGRSSNRASQSVDVLAKNTEDLANKTAKLNGIYQDSKGRWHEAGGKFISVAEAAKRAGVSIEELQRDFADVAKKAGDGAKKFGDDAKKAGDDVDGLKRKTDGLKTAFGTLKGVMFTALAVAGVGGIIATADDMQTLTSQIKLATTSTKDYAHAMSEIERIAMGNMVSLDSVGQLYASNERSLKQLGKSQDEVIKFTENITTAMRVSGGSAESQAAALTQLGQAMASGVLRGDEFNSVAEQAPVIMELMADSLGVTTGKLRDMAKEGKLTSKVVYDALAGASASDKLAEKSKKMSTTISGAMQNIQTQWRLGVDAIMNGEGGLSSVLADGINSIALGASSFVDSLPAINQAITDTIAKAKEMGTAFLESDFGQATIQIAKDAFEQLKSAMQGVVDIAGDVKVFFEKNPELAIALASGAGAAAGAFLLFKGVLIVWTGVATLATAAGGALAAVMAVLTSPITLVIAAFAALVAAGVYVYRNWDTIKQKANDAWQSIKETWQGVGEWFGDLWDKVKQTFFNWLSQMPKPVQDMVANIGEIFSTIVDVAGAVWGSIANIAKSVWHAITEFASYAIDKIKPIIKSVLEFFKNAWDGLVGAAKTVWQAVASVVSHVFDKISGIISTQFEAMKAIFMAGVTIFASIFNAGFEMVKTIFSTAFKVIKAVLTGDMQGVKDAIKDGFQKAVDISKKLVGNIVDALKKLGKDLLQVGRDAMQGFINGISEKIGAAVSKAKEMASSVKNAVTGFFDIHSPSRVMKQIGEWVSEGLAIGIAYKAPIATKEAKNLAKSVKNALESELQKTAEEIFLTKQHIAGNPYAELTKDIAFGKYGKQDTSRLQKLAQEQILQSNILTLTQQLHETRQNLANVGLTSIEIMQRQYDETDKSVRASLDLFEQVKKTSQELIDATNRHEATQEFESTLKDITKQMAIMGSQDPLAEFLYDLQNAEKYAYYTTEQLATLKDEMIKLQDAKDAKQASDGIKESLKDINKQLALLGSNHPLDDFFYELEQTDKYAHATTDEINELTDAIFKLQNAKDTLNAKQAFDTLMKDTALANETPAQRLQREYDEKMAVIDRYEQMHSDKLENATSLRQQITDRYEQAEKDAKVKNYQEHLTAFAGFLKNTAGEQSKAYRLMFAASKAYALADVGVKMGKAVADAWADPSAVTIWQKLANVAKVSLEQGHVLSMINAISPKGFATGGYTGNMGINQVAGVVHGQEYVLNAKATKRIGVGNLERLNRGDGIGGHVNHISVNVTVNSDGSGDVQANHTMGKQLGYAIKLAVQSELQKQARQGGLLYGR*	hallmark_hmm	common_virus	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0022	shell	direct	moderate	4013	0.964	GCA_009378535.1_01375
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	102954	103298	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	23574	23918	GCA_009378535_1_11_95	GCA_009378535_1_11_95	+	340519	.	PFAM:PF05939.12	minor-tail-protein	MADNLKTFTWDVSQDSSESISHNTTITAFGDGYEQAVSFGINNSRKSWQCSKTDTKAVIDEIYRFLIDTKGVEPFNFKPLTDEPSIKVRLDGEISRQKMGGDAWQIGFTLKQVF*	hallmark_hmm	common_virus	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0023	shell	direct	high	344	0.997	GCA_009378535.1_01376
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	103405	103803	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	24025	24423	GCA_009378535_1_11_96	GCA_009378535_1_11_96	+	340519	.	.	hypothetical protein	MSEPTLTEVSRTEAQVLQSFIAQVDYWKNQHGDKASTIEITYYPDDDGFEVSNNEANNGVLKRNRTTVFRADLLAWASNQLRQLQGYDNSQTVTEFSLSYKNDRYGVRAALASEAKTTDKADDGAEQAEQDK*	.	hypothetical_protein	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0024	persistent	direct	high	398	0.997	GCA_009378535.1_01377
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	103902	104570	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	24522	25190	GCA_009378535_1_11_97	GCA_009378535_1_11_97	+	340519	.	PFAM:PF05100.11	minor-tail-protein-	MSFNTDIQQTTVQGFITLYELDARKLGGEIYRFHGHNDGVIRWQGQDFQPIAIKADGLEMRSDGRASTPKLSIGDKINGIQGAVSALCRLYDDFARAKLTVTHTLQAYLDSHDAQNYRQQEWYIEQKVSENPSLGIVEFELSNPVDFEGQKIPVRQITTYCNEAVCGRYRGEICGYTGTARFTHDGKPTDDPTLDRCSGLLAHCKLRDNEGSFCGFPAAGLV*	hallmark_hmm	common_virus	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0025	shell	direct	high	668	0.999	GCA_009378535.1_01378
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	104580	105134	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	25200	25754	GCA_009378535_1_11_98	GCA_009378535_1_11_98	+	340519	.	.	hypothetical protein	MNDHYPQLKGKTFETWQELWQAMTDRDFDEVYGLHCECERKRALGHYRNRKLKQAKNLIGILLYRQKLHQVKQPLILTKRRYAEPLPNPKNIDEIWQNLTDENYDEMYRLHCQYAKQQHNKDTKRACGLIWKFRQHCKLAGFDYPKKCVTKGFRQSKNHPWQKMIESDVQFYQNTHRQQRQNQA*	.	hypothetical_protein	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0026	cloud	direct	high	554	0.998	GCA_009378535.1_01379
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	105082	105555	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	25702	26175	GCA_009378535_1_11_99	GCA_009378535_1_11_99	+	340519	.	.	hypothetical protein	MYNFIKTLTDSKDKTKLKTKEFAEVTTPLWLVQKQLDLIPSDERLNLNSKVLDPCTGDGRYLMMYLMNRLTVIKCPNDLYQAISTLHGIELQAVNVARARHNLYLCTKFIAQSKGLAVDFDKVKKILAKNIWQGSFIKRTKNDTHRTNQKLHPQPRL*	.	hypothetical_protein	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0027	cloud	direct	high	473	0.998	GCA_009378535.1_01380
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	105506	106285	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	26126	26905	GCA_009378535_1_11_100	GCA_009378535_1_11_100	+	340519	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MILTEQTKSFILNHAFDCYPAECCGLIIDGQYYPCDNVAPNPTEHFEIDPQNMLEMQDIGEIQAIVHSHPNGNAEPSEVDRVQMGVHGIDWVICGFGYHADGEQYFNIKCHKPKVYQAPLLGREYHHGVQDCYSLVRDYYSRELDIHLPDFERADAWWEHENHEPLYEKNFTKAGFIKVQDKNDLQKHDVILCRVGRTHHVNHALIYLGDGKLKSETTPDCVGNALILHHPHGGLSVREIYGDSWQRRTAMVVRHQSLG*	mmseqs_cdd	common_virus	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0028	shell	direct	high	779	0.999	GCA_009378535.1_01381
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	106277	106684	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	26897	27304	GCA_009378535_1_11_101	GCA_009378535_1_11_101	-	340519	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MLYPIAIEKPVSTNECYGVIVPDILGCFSAGDTVDEAVKNAYEAIVLHLDMLADDGEDIPQATDIAHHQENPDYQGMIWAVVDIDLSAYMGKSEKINVTLPSRLIVKIDEKVKAHKSLYKSRSNYLAQLASRDLA*	mmseqs_cdd	nonviral_gene	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0029	shell	direct	high	407	0.998	GCA_009378535.1_01382
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	106717	106899	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	27337	27519	GCA_009378535_1_11_102	GCA_009378535_1_11_102	-	340519	.	COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family [General function prediction only]. 	MNSRQMIKLITDDGWYEVAVRGSHHHYKHPTKQGKVTIPHPKSDLPIGTVKQILKQAGLK*	mmseqs_cdd	nonviral_gene	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0030	shell	direct	high	182	0.995	GCA_009378535.1_01383
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	106999	107592	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	27619	28212	GCA_009378535_1_11_103	GCA_009378535_1_11_103	+	340519	.	PFAM:PF06805.11	tail-assembly-protein-I	MKTIILHGILAKKFGKSFDLDVKTAKEACHAIACQIPAFYAFMMNAEKQGIKFAIFNGEKRTQKTNIGEKQVDDITTASHIHIMPRVIGSGGKAMGWLQVVAGAVLVGVGVVTGNVGLIGAGAGLILGGVSSLLMPTPKLDPNNEDGNRPNNGFGGAITTVAQGNPVPILYGEREIGGFIVSAAIYAEDKMVQGVKI*	hallmark_hmm	common_virus	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0031	shell	direct	high	593	0.998	GCA_009378535.1_01384
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	107601	109106	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	28221	29726	GCA_009378535_1_11_104	GCA_009378535_1_11_104	+	340519	.	PFAM:PF13550.5	tail-protein	MKIYGAKRQKQSSRKPYIQKDTASSTNFYQALYGLSEGEIYGLVDGGKSIRLDGTPIINDNGEPNFPDVSWDFRAGSIDQTHIKGFSSVENEQSINVELRHDRPYTKAINNKQLSAVAIRLGFNALREQKDNGDVIGYRIEYAIDVQTDGGAWEMVLNTAVDDKVSQGYQRSHRIDLPKAQQGWSVRVRRLTPNRDSETVSDTMVISAVTEIIDAKLRYPCTALLALKYDAQTFSNIAKVSVRVRGMLIQVPTNYDPVARTYDGVWNGTFKLAYSNNPAWVFYDICTAKRYGLGDRLAGKVDKWSLYRLAQYCDEMVDDGKGGKEPRFTVNVYLQKADDAYRVLQNLSSVFRALSFWDGQSIVVDADTPKEPVYVFSNANVIGGEFSYTGTRARDRHTIVKCAYDDPDNNFETDYIYVQDEHAIAKYGINQLELNLFGCTSKGQAQRAGIWALKSEQLETETVSFSTGLDGFIPKVGEIIDYPCARQSPSWAYASWADCGN*	hallmark_hmm	common_virus	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0032	shell	direct	high	1505	0.999	GCA_009378535.1_01385
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	109078	109662	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	29698	30282	GCA_009378535_1_11_105	GCA_009378535_1_11_105	+	340519	.	PFAM:PF13550.5	tail-protein-and-host-specificity	MQAGRIVATDGRQITLDRVAGKVGDTVMVGDNSAKIVQIDDTVITTDTAIGSAGQVFAISSSDVAPRAYRVMTISQNDDASFSFTALQYEIGKFTATNAAIPKKEVSVIKAHVLTPPNSVSITERTRTHQGQAITTLVISWEQVVGAVAYVDKDEIDGTAGRMTVNRATQVQAVTPDKIREVGEQFRSHPKNHI*	phrogs_hmm	hypothetical_protein	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0033	shell	direct	high	584	0.998	GCA_009378535.1_01386
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	109625	109930	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	30245	30550	GCA_009378535_1_11_106	GCA_009378535_1_11_106	+	340519	.	PDB:2MXZ_A	L-alanyl-D-glutamate-peptidase-endolysin	MSNLDPTLKTISERSLKSLQGVHPDLVKVVLHAIKISPVDFSVMEGVRTKEHQRELVKKRASKTMNSRHLTGHAVDIVPIIGGKISWNFDDLSPCQWHNLR*	common_virus_hmm	common_virus	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0034	shell	direct	high	305	0.997	GCA_009378535.1_01387
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	109863	110117	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	30483	30737	GCA_009378535_1_11_107	GCA_009378535_1_11_107	-	340519	.	.	hypothetical protein	MQFTVYLVIIFGLITMQIKLSNLSERVSAPYDLVKQIMGHRPTATDEKHDKDRLIDLLRYWHTIADCAIGKGINHQSSMRFCHQ*	.	hypothetical_protein	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0035	cloud	direct	moderate	210	0.824	GCA_009378535.1_01388
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	110488	111588	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	31108	32208	GCA_009378535_1_11_108	GCA_009378535_1_11_108	-	340519	.	COG0842	ABC-type multidrug transport system, permease component [Defense mechanisms]. 	MRRFIKQYLTIWLDVIKDRSIFLTMVLSVVFYGFFYPFAYQAQRPADLPIVIVDEEQSPLTQAIIHTTSHTPNIHVLAVVSDFRQAQMLVQSAKADGILLLPDNLSQSIHHGQTGGVGLYLSSAYFLRTQNIGAGLASSLQATIIQELGQVTQTRHKPMPELIHQSALFNPLSGYGSYIFPAVAPIIVYQTIVLGLAMLVAGYRQRLWRASACDFLAIYAVALTIGCLSCFYLFGFVFWWHDYPRGGNFWGMMLGVPIFVSCAIGVALLIASWVADGAKVGVLLIFSSVPLFMLTGLAYPLMAMPKFLQPLANTLPTTQGVQMFVQLNQMGVPIQDVWQKMAYLASVAVLCLGVAFWRLRLVNKSV*	mmseqs_cdd	nonviral_gene	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0036	persistent	direct	high	1100	0.999	GCA_009378535.1_01389
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	111588	112766	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	32208	33386	GCA_009378535_1_11_109	GCA_009378535_1_11_109	-	340519	.	PF12698.7	ABC-2 family transporter protein	MIVRFIRAFCQAFLRELNRLSCNRFDLAMVMIAPLVIIVLFGAMFYHGKAHHLPVALVDEDNSELSHLIYQHIHHNETVEAVLILDDIQDAHHAINRLDVGGYIHIPKDAQNRLVRGENTGIHIAYNQSFFSIGSAISSALSKSTKGGIAKFIQTKHLTGVLPHLSGNMPHVKISVLFNPNLSYEFFLEPFLVAAVLHLLLCCLVAHAIGQEFHEHSVHEWLYHSPFGALFGKISVYVLIISLWHGLWQAWLIGVRGWFVAGSLFVLIIGQLLFYLAYALFGAMVVLKTQNINKSYGILAVYGGSSMSFAGVTLPLNNASGFTQFWSQIIPFTPFARLQVEQWVIGSPFIITLAHLNSLLIFVLIFAIGSLLLLRRIKKTLIAIPNTPKDDS*	hhsuite_tools	hypothetical_protein	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0037	persistent	direct	high	1178	0.999	GCA_009378535.1_01390
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	112794	113957	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	33414	34577	GCA_009378535_1_11_110	GCA_009378535_1_11_110	-	340519	.	COG1566	Multidrug resistance efflux pump [Defense mechanisms]. 	MTDKTDDVKPDTDGNHSKKQKPHTQAKSKPRPLALFLLLALIGSVLLVIIFGLIQSYGTPQNLPTANAIGGTNESPKGVIAHVRQKITGPATFSIQGRVEGETVNISTKLPSRVAAIYVKEGQAVRAGEPLVQLISPEIDAKKQQAAAMLQSALAFQSSTDRGTRQENVDTLYANWQSAKAQATLAEESYRRGEYLYQEGVISRQRRDEMRAAKQSSAQIAQAAQQQYLKAERGRTDELKSSADAQVQIARAAVAEADALDAETMLYAPIDGTVSKIYIQSSELVMPAVPVMSLLDNHPTITISVQENQYSHVHALPKLTGFIPALNKTADFKIVHTDDEGEFATIKNTRQTGGYDIHSFKTKLEPITPIEGLKVGMSVIFDITVLP*	mmseqs_cdd	nonviral_gene	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0038	persistent	direct	high	1163	0.999	GCA_009378535.1_01391
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	114004	115500	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	34624	36120	GCA_009378535_1_11_111	GCA_009378535_1_11_111	-	340519	.	4K7R_A	Cation efflux system protein CusC	MSIKCQLVAIDNIIKPCYDRILNFVYFSTMKMPYFLLLGLLLVQQADADYSLLDAQKQLMSNSPAIQASHALYQADVLQAESLQKLHYPRISLNAHAFALQQNSSIPLDNIKEQTAQHINTHFDHRFGNAPDGLLDALHDSTQTALDRLPDHQDVKLRHDGINPNITATMPIYTGGLISSSKNIANLQAQRGKFGLQERISLAKLNLIRHYFNVQLQKQLTDTQQNTLSAMQLHVDNAYKLEQQGFISRGQRMQFEVARNQVQRLYQSTQNQHQNSIYELAVLLGLPHIEPLSTPLFINTQHRPNWQALLKDSQNTPLNQKLKTDILLADENIALRQSTKKPKIAAVARYTLDDKPDWFAGVAVQYNLFSGIDRDKQIRAAHLQKQAAKSGHEQVNEHITTTMHTAYGEMVLAQKTHALLQQNHQAAKENLRIQTLSFQEGFGTVAGVVDAQSALSQIDSETALNAYRYLLALATLLHHTGTIDDFDDYLSLDDAHKL*	hhsuite_tools	hypothetical_protein	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0039	persistent	direct	high	1496	0.999	GCA_009378535.1_01392
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	115764	119936	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	36384	40556	GCA_009378535_1_11_112	GCA_009378535_1_11_112	-	340519	.	PDB:5XDR_A	Replicative-polyprotein	MHSTDNLPVLAKDRHYLNKLKQKVDSTTGDLKAKCKIRYDAIYKRSAEQVANRMDSIPKNLSEKLNHDLPVTAEADTLIQAIREHQVVIIAGETGSGKTTQLPKLAMMAGRGVTGQIGHTQPRRLAARSVAMRIAEELGETLGQTVSFKIRFTEEGGKHSIVKLMTDGILLAELGSDKFLANYDTIIIDEAHERSLNIDFIMGYLKRLLPKRPDLKVIITSATLDTQRFSDYFSVHGKPAPVYIVEGRSYPVEVRYRPLTDTIVSSQDDDAFDDIEDNLPRALTAAVNECFEDARVKGHPDQADILIFAATEAEIRELQEVLMLYAPAHTEILPLFARQSYGEQQKIFAPSGKGRRIIIATNVAETALTVPNIRYVIDLGFARISRYNYRSRIQRLPIEAISQAAANQRKGRCGRVASGVCIRLYSEEDFNSRPEFTEPEILRTNLASVILQMERLQLGDVNDFDFITPPDLRLVNDGRKLLIELGALDDKSFTKTRAKKGRTQLSSLTKIGQQMAKMPIDPRLARMLVAGDTFDCLADILIIVSALAVQDVRERPINKQAQADQKHALFRKEDSDFLFYLELFAALFDQHSTNDNQVLGSNARRNFAKKHYLSYARIREWQKTHRQLSEMMAEMGFEINKQKNHQNGVKTDTKKGTRLSLKSGASRQKSIKQALVGAKALKNEIDHKTSIHYANIHRALLSALLSFVAHKTDTMGEYLMARSQKARIFPASTLHKKGAQWVMAFEVVETSQVYMRTLAKIEPEWIIKAAPNLLKYHYFEPHWSKKAGRVRAYAQISLFGLIVIAKELVNFEQIDLVQAREIFIRDALVANQYGMQMKFLADNANKIKDIERIEDKLRRRDLLVDEERLYQFYDAKIPNHIASRKSFEEFYHDAENKTPNFLHFSDEDVLNEAVDDNREFPESWHLGGVRLPLSYVFDPAADDDGVTVRVPIKALAQVDPVALLWGISGWRYELVLQLLKTLPKEIRRQIVPIPDTCQKIFHQLDASSKMGLLDQLVAALKTLGVQTQAQDFAPDKVEDYLRPLICVVDDKNRVIEKSRDLPKLQARHRKTSVQSIAVEQGVHHHFPNHFNFVKNKHTSGIVMQEFSALKADTAQSAVFIATFTEINAALAEHKKGVLTLIKGRLGAKQKQLTGQIDKAFKLAFAPLGDLEKLKNIVVHATLEACLYEYGQDFDHKPVSQNGDHARAAIAGLVTQNNQWLISHLPLDEREFEYCQDLILKNFLLVGQEILKSLKEIYTAWQTARGKLLMLDQEIFGENIEDIEDQLDDLQLANFVYQTDYRHWRQYPRYLQALNIRLDRLQHNLEADLDAVYLLDTHMERLARCVKNPKFAEYRWLVEEYRINLFAQPMKTAQPVSAKRLETLWANLTTQ*	common_virus_hmm	common_virus	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0040	persistent	direct	high	4172	1.0	GCA_009378535.1_01393
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	120212	120901	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	40832	41521	GCA_009378535_1_11_113	GCA_009378535_1_11_113	+	340519	.	TIGR02796	TolQ protein. TolQ is one of the essential components of the Tol-Pal system. Together with TolR, it harnesses protonmotive force to energize TolA, which spans the periplasm to reach the complex of TolB and Pal at the outer member. The tol-pal system proves to be important for maintaining outer membrane integrity. Gene pairs similar to the TolQ and TolR gene pair often number several per genome, but this model describes specificially TolQ per se, as found in tol-pal operons. A close homolog, excluded from this model, is ExbB of the ExbB/ExbD/TonB protein complex, which powers transport of siderophores and vitamin B12 across the bacterial outer membrane. The Tol-Pal system is exploited by colicin and filamentous phage DNA to enter the cell. It is also implicated in pathogenesis in several bacterial species [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MNESISLISLVIEASIVVKLVMAILLLLSTISWVLIFHLGAKIGGVAKFDERFEQWFWTDEIDRQLSVVQAESERVGLELIFYTGFYDQNHTNQDFALSDDKKVQMVERRLRMALGGEQVRLEKGLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQAESVGLATVAPSIAEALIATALGLFAAIPATMAYNHFTAKSNTLYENRSLFCEGLMSALVTNLAKKNTASTL*	mmseqs_cdd	nonviral_gene	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0041	persistent	direct	high	689	0.999	GCA_009378535.1_01394
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	120926	121360	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	41546	41980	GCA_009378535_1_11_114	GCA_009378535_1_11_114	+	340519	.	TIGR02801	TolR protein. The model describes the inner membrane protein TolR, part of the TolR/TolQ complex that transduces energy from the proton-motive force, through TolA, to an outer membrane complex made up of TolB and Pal (peptidoglycan-associated lipoprotein). The complex is required to maintain outer membrane integrity, and defects may cause a defect in the import of some organic compounds in addition to the resulting morphologic. While several gene pairs homologous to talR and tolQ may be found in a single genome, but the scope of this model is set to favor finding only bone fide TolR, supported by operon structure as well as by score. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MATSNRFARRQRPLNSDMNVVPYIDVMLVLLVIFIVTAPMLATGVEVSLPKEQTKPITQADKLPVIVSIQSDGNLYVSHKNAIDVPITPDKLDALLRQMHQDNANLQVMVNADADNAYSQIMHIMALIQNVGITQVSLLSESVQ*	mmseqs_cdd	nonviral_gene	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0042	persistent	direct	high	434	0.998	GCA_009378535.1_01395
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	121391	122185	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	42011	42805	GCA_009378535_1_11_115	GCA_009378535_1_11_115	+	340519	.	PF06519.11	TolA C-terminal	MRSSDNHPTVNFDKSALILPILASVLLHTVIIIAVAAPLITPPTKPNTAIQTALVGQEAFNSAKTALSNHHANQNTPTAANASSTITANDNAFMQAQNQHRYRPQVSTSATTTQAYHPLPNSAPFESNSPNIQNQPTNAHAKLAKYSNNDSDLEQANHTESTPSRAQINAAISSVKHRIETIWQRYPKQPNQTITFQVNIDQQGDVTSIQFGGGHPDLRESVEAAVYAAAPFYELGGMRDSIRLQFTTEQLIMDNSQTPNEPNH*	hhsuite_tools	hypothetical_protein	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0043	persistent	direct	high	794	0.999	GCA_009378535.1_01396
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	122202	123464	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	42822	44084	GCA_009378535_1_11_116	GCA_009378535_1_11_116	+	340519	.	TIGR02800	tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MKSPITKVCLALTISFAAALTHAYADDELIVISEQVAQSRYPVAVMPFSEAHQVSHYLSLAGLGATHQNLPQHTQTNHDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEIIDTTNGSVSVKHTQISDNHPASIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNKISSLKLIDPNGQLIRTLDTVNGSIITPTFSPDGLSIAYSVQTKNNLPIIYIVPVSGGTPKLITPFWGHNLAPSFSPDGGSILFSGSHENNNPNIYRLNLHTNHLDTLTAFNGAENAPNYLADASGFIYTADKGTRRQSLYRYDFGTTHSTQIASYATNPRLSPDGSKLVYLSGGQIIIANTKGRIQQSFRVLGTDVSASFSPSGTRIIYTSNQGNKNQLMIRSLSSNTIRTVATSGTVRDPIWSK*	mmseqs_cdd	nonviral_gene	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0044	persistent	direct	high	1262	0.999	GCA_009378535.1_01397
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	123730	127287	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	44350	47907	GCA_009378535_1_11_117	GCA_009378535_1_11_117	-	340519	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MMIDTLKPKLNLPTKANFKTTLPLLGGADLSFWLALAAKSEERLIVMIANHQNELNQLDTELSFFGIDAHVFPDWEILAYDQLSVHQDIISERIALLTRMPTTGVLLVSTQTLMQRIAPPSWLIGQHFDLAVGDKFDINEQRLRLTKAGYVQTENVFEPGEFAVRGSIVDIFAVGQSLPFRLDLFDDDIETIKFFDPDSQRTLSDNELAQLKKDAQAGMNTHHAQKLPSSAKITEFRLLPAKEFPLEEGKEMFRQNFASLFPEASARKIEFYNDVMAAIAPQGIEFYAPLFFELDAWMKTGNLFSYLPDDALVVSHDDLATRHDEYYQQIQARHHSRAHDKSLPIMPPDYLFLANNEFHQALKAYPRVVINTNHDTAKIGAIASLPPPILPINHQAAEPLSELLSFIKSGQVPILLVAESAGRREIILELLKDKVAVKVVDNYQEFINNLDDFNADCIALSVAPIERGLWLRDETGGLCIISETQIFGRQVLQTRRRRQSSVSQAFLIKSVTELTEGALVVHLEHGIGRYQGLVVLDVGEGEQEFIHLKYADDASIYVPITNLALIGRYSGSDLQTVSLSKIGSGKWEKAKLKALEQIHDVAAELLNVQARRNAKSGISFDIDMSQYELFASQFAFEETIDQAEAIHAVMHDMKQNKPMDRLICGDVGFGKTEVAMRAAFIAVQAGYQVAVLVPTTLLAGQHEDSFLNRFADWPIKIESLSRFGNKKHQDAILAGLADGTVDIVIGTHKLIQDDVKFKQLGLMIIDEEHRFGVRHKERIKAIQTNIDSLSMTATPIPRTLNMALSGMQDISIIATPPARRLAIKTFLLPKSDETVKEAILREILRGGQVYYLHNDVASIEAAADTLRELVGEARVAVAHGQMNERELSAVMNDFYHKKFNVLVASTIIETGIDVPNANTIIIHRADKFGIAQLHQLRGRVGRSHHQAYCYLMVPSLKGLSSDAKKRLNAITRANTLGAGFMLASEDLEIRGAGEILGKEQSGNMQTIGFGLYMDMLERATNAIKQGKTPSLATPLDLVSDIDIHASALIPDEYLGDVHERLVFYKRISSLDDVNQLIDIRTEMIDRFGTLPTQTQNLFAVHRIRIRAKALGITKIDATQSTINIEFRADTPIDGLAIIKLIQSNDGYRMNGATAIRYTSQELMDTQARIDKVNELLLYFESAKTA*	common_virus_hmm	common_virus	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0045	persistent	direct	high	3555	0.999	GCA_009378535.1_01398
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	127289	127951	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	47909	48571	GCA_009378535_1_11_118	GCA_009378535_1_11_118	-	340519	.	COG0352	Thiamine monophosphate synthase [Coenzyme transport and metabolism]. 	MTLQSIDKVPKLYLLTNDDELTTLLDKLERVFDTGAVSLLQVRRKSTLKLYDLATVYREAEMIVSLANDYDIKVVMNDNLELASHFGTGLHLGQRDGSVRVAREILGDDVVIGRTCHTDIALFKEAKREGATYGAMGTAFASITKPRAKIISKDILKKACEFDFPLCVIGGITLENIHQLRDELNGAPIDYIAVTADIMGHSVDTIADKCLAWQQKLNTW*	mmseqs_cdd	nonviral_gene	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0046	persistent	direct	high	662	0.998	GCA_009378535.1_01399
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	128106	128543	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	48726	49163	GCA_009378535_1_11_119	GCA_009378535_1_11_119	-	340519	.	6AF2_D	HIT domain-containing protein	MFQLHPTLAKDTFLVGDFPLSTVRLMNDCQFPWLILVPRVSGIKEIYELSVADQIQFLRESSWVSSQMAKIFGADKMNVAALGNQVSQLHFHHIVRYQNDAAWPNPVWGHEAMPYTQEVLSHMQQTLMMALRGHHQMPFDWKMDV*	hhsuite_tools	hypothetical_protein	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0047	persistent	direct	high	437	0.998	GCA_009378535.1_01400
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	129163	129360	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	49783	49980	GCA_009378535_1_11_120	GCA_009378535_1_11_120	+	340519	.	PFAM:PF16777.4	transcriptional-regulator	MPKIVANPKTRAQIQKDSDTRRGVKQIGFKVPISFVQRLDELAKQTGKTKNIIIMEAVDLWAKQL*	phrogs_hmm	hypothetical_protein	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0048	persistent	direct	high	197	0.995	GCA_009378535.1_01401
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	129382	129642	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	50002	50262	GCA_009378535_1_11_121	GCA_009378535_1_11_121	-	340519	.	.	hypothetical protein	MDKQKQLYKDNEDALTQLAQEGVAARIAIDEAYQSAKRSSCPSKTFWTNTKASNHFCGQIRMDKPKNMSVKIMKSVRKKATFGRLF*	.	hypothetical_protein	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0049	cloud	direct	high	260	0.996	GCA_009378535.1_01402
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	129635	131353	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	50255	51973	GCA_009378535_1_11_122	GCA_009378535_1_11_122	-	340519	.	.	hypothetical protein	MVGAVWLANVARNSALVTSFVSLTGATVASTKASIANAFSVQGQITAYNALSTRLMLLRLTKAHYIDLTKTAIATTAVYARSLVGLATSFNTATASARLHTLALAGVTTAKRSAMGVGILATRAITGLGGAFMTLGRIITAHPIIAIGAVLASVVVSTHGVTGALESLSDAFGVATLMTKDFITFIGDGFSMAWDIVSNFADNMLAKVGDTTKGSTGAFSNFFATSHGGFVGMLQVAAKTFDLINAAAKAGAKNALHNFVQLGKTTKNIFLGMGNAFVSIIEMMINNAARKIDFLSTKANGMAKVLGIEASIPLIGTVSLGRLQYDNVDFGAVASIADNNTNSAYNYVTQLADKATQATKANASLADSYNSVGSAATNAANATKNASDKTKKTADDITDAINELDALVAKLHHESHQLLNNSLSEMIFETDNKLGKFYGATEAQKQKLKDLAGQKDLYTATKKADDELKSLARTIKLVGKQTPFDELAHDLFDVRHEMSVLNGETKNNLLLWAANAENAKLAYELNQRSSQIKHDAMLSNHASSYQRELLNIDREINQELRNPPKPLGAVYG*	.	hypothetical_protein	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0050	shell	direct	high	1718	0.999	GCA_009378535.1_01403
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	131319	131543	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	51939	52163	GCA_009378535_1_11_123	GCA_009378535_1_11_123	-	340519	.	PFAM:PF08273.11	primase-helicase	MRQQANGRWQYVLARLGYDVGDGRHKPCPHCGGRDRFRFDNHNIKAGDGGWICSQGIGETAGGDGRSGMACQCC*	rep_hall_hmm	common_virus	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0051	shell	ambiguous	low	36	0.16	GCA_009378535.1_01403
GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote	cenote	CDS	131592	131843	GCA_009378535.1	RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535.1_RCJP01000002.1	GCA_009378535.1|RCJP01000002.1	GCA_009378535_1_11	GCA_009378535_1_11@C7	52212	52463	GCA_009378535_1_11_124	GCA_009378535_1_11_124	-	340519	.	PF16793.5	RepB DNA-primase from phage plasmid	MNDYMISQKFKRFQEILLSDKAIHDLARVMRLPGFIHQKTKNGVTTDAFTSRVVYVGKRYDKADLMAWLATMDVVVEQNTPLF*	hhsuite_tools	hypothetical_protein	C7	52463	79381	131844	GCA_009378535.1|RCJP01000002.1@region_79382_131844@tool_cenote_CDS_0052	cloud	direct	high	251	0.996	GCA_009378535.1_01404
GCA_009378535.1|RCJP01000007.1@region_29751_34837@tool_cenote	cenote	CDS	29750	29878	GCA_009378535.1	RCJP01000007.1	GCA_009378535.1|RCJP01000007.1	GCA_009378535.1_RCJP01000007.1	GCA_009378535.1|RCJP01000007.1	GCA_009378535_1_4	GCA_009378535_1_4@C2	1	129	GCA_009378535_1_4_31	GCA_009378535_1_4_31	+	99418	.	NF033494	methionine/alanine import NSS transporter subunit MetS. 	MGTLALIVMMIAMVAIWGGLIISALHLSKHPDIDMDKVPSHH*	mmseqs_cdd	nonviral_gene	C2	5087	29750	34837	GCA_009378535.1|RCJP01000007.1@region_29751_34837@tool_cenote_CDS_0001	persistent	direct	high	128	0.992	GCA_009378535.1_00483
GCA_009378535.1|RCJP01000007.1@region_29751_34837@tool_cenote	cenote	CDS	30095	30259	GCA_009378535.1	RCJP01000007.1	GCA_009378535.1|RCJP01000007.1	GCA_009378535.1_RCJP01000007.1	GCA_009378535.1|RCJP01000007.1	GCA_009378535_1_4	GCA_009378535_1_4@C2	346	510	GCA_009378535_1_4_32	GCA_009378535_1_4_32	-	99418	.	.	hypothetical protein	MSYTGHLMQPHTLSTSPTMAGQRPHTVGLWQIIKKVDLPPYIHRLKRWFYGGDG*	.	hypothetical_protein	C2	5087	29750	34837	GCA_009378535.1|RCJP01000007.1@region_29751_34837@tool_cenote_CDS_0002	.	unmatched_CDS	none	0	0	.
GCA_009378535.1|RCJP01000007.1@region_29751_34837@tool_cenote	cenote	CDS	30313	31176	GCA_009378535.1	RCJP01000007.1	GCA_009378535.1|RCJP01000007.1	GCA_009378535.1_RCJP01000007.1	GCA_009378535.1|RCJP01000007.1	GCA_009378535_1_4	GCA_009378535_1_4@C2	564	1427	GCA_009378535_1_4_33	GCA_009378535_1_4_33	+	99418	.	PRK09866	clamp-binding protein CrfC. 	MSQTYETLTQAEINGYKDTLIAILQKQIGILDNLKDDLERDKRNGVNQDGILNYDKTINFAEKLNGEIAKLQNFDVVLAVVGTMKAGKSTTINAIVGREIMPNRNRPMTALPTLICHNAEQHTPKLKINSSTLNAFLNTIRPSISQLNIKDDYQDNKDMIELIEFIDSGKKFQDEYMGEENIFEFLKQLNDLVRLAKHIENHDSSIKFPFDDYKNFKNLPMIEVAFNITVDTDTNGRFMLLDTAGPNEAGQEELITSLEEQLERSSAVMVVLDYTQLNSQAEADVKA*	mmseqs_cdd	nonviral_gene	C2	5087	29750	34837	GCA_009378535.1|RCJP01000007.1@region_29751_34837@tool_cenote_CDS_0003	cloud	direct	high	863	0.999	GCA_009378535.1_00484
GCA_009378535.1|RCJP01000007.1@region_29751_34837@tool_cenote	cenote	CDS	31366	32778	GCA_009378535.1	RCJP01000007.1	GCA_009378535.1|RCJP01000007.1	GCA_009378535.1_RCJP01000007.1	GCA_009378535.1|RCJP01000007.1	GCA_009378535_1_4	GCA_009378535_1_4@C2	1617	3029	GCA_009378535_1_4_34	GCA_009378535_1_4_34	+	99418	.	PFAM:PF17395.1	type-I-neck-protein	MTTALKSEKPAYDEGNWVGDFAGKLYGRRPEQTYNDSTPEELAKDIQDLLDDSLMQEPIEKVVINMQKNAPLIAMQSALAEANDVFNNLNNKLNIGNMFAEKGEMTQNEIDELNQTITSLKNRLADLQADRQKISNKIELVKQVIDKNINLDDKIKLLNNQAKLTIEIFLGRENEDIKQEQDELVGKNRSLRYLLRLASKETPETLRKEREDLDKLRERAKSDGNKLIFSEMSDLQSFEQKLEQQLVHYAQNNIMSSFTKILKKSENQVVEVVKDVQQDCLEILSQMSDDFAKKGVDLRIEFNPMGELKKHAGRLNRFKLNVQTETHTGTRKQSGVWGSLKRGLGGLFGQSWGNDKVDYETHTIYIDEMTKQLTESIKDEIILPLKEQVQEKTSALLYQGLYHINKFESTIDDIVAEFKQGMEQEKHHTSRNIQEKEQYYKAIMQNKKVHDEVKEDWDSIARIFDVQEIA*	hallmark_hmm	common_virus	C2	5087	29750	34837	GCA_009378535.1|RCJP01000007.1@region_29751_34837@tool_cenote_CDS_0004	cloud	direct	high	1412	0.999	GCA_009378535.1_00485
GCA_009378535.1|RCJP01000007.1@region_29751_34837@tool_cenote	cenote	CDS	32863	33762	GCA_009378535.1	RCJP01000007.1	GCA_009378535.1|RCJP01000007.1	GCA_009378535.1_RCJP01000007.1	GCA_009378535.1|RCJP01000007.1	GCA_009378535_1_4	GCA_009378535_1_4@C2	3114	4013	GCA_009378535_1_4_35	GCA_009378535_1_4_35	+	99418	.	CDD:pfam11123	DNA-packaging-protein	MQLINHKADIETALPYIKDKMMIDFVNGLDTAKAINTQNHRRASNSGFIARNLFLLSGKAQMTQNNINDHLLTGLEACRDYFKELSYHNQAHAVAISGLKEALSHTQNNMAEIAHFVADFKELVDDRFQELDSRVFRLELKDRANTQRQAVLKNWEAERLSDLSPMAQCFSVLDSLKWGDFGYYVGTLSNHEKEQCLDTLMNEMVVIQKNLLGVSAQRDLPKDTWLTAPTTTKAQALGQAVAYQGDWSWQDPTNYGMVFTATQYPMLDEPEQTKYKNISLPMIDSQRLVRRMSANVFDI*	hallmark_hmm	common_virus	C2	5087	29750	34837	GCA_009378535.1|RCJP01000007.1@region_29751_34837@tool_cenote_CDS_0005	cloud	direct	high	899	0.999	GCA_009378535.1_00486
GCA_009378535.1|RCJP01000007.1@region_29751_34837@tool_cenote	cenote	CDS	33772	34836	GCA_009378535.1	RCJP01000007.1	GCA_009378535.1|RCJP01000007.1	GCA_009378535.1_RCJP01000007.1	GCA_009378535.1|RCJP01000007.1	GCA_009378535_1_4	GCA_009378535_1_4@C2	4023	5087	GCA_009378535_1_4_36	GCA_009378535_1_4_36	+	99418	.	cd07209	Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.	MATSTVGLVLSGGGAKGAYHVGVMRALREMNVNVDMIAGTSIGALNGAVLASAPSLDVGTDRLIELWHALSEQNPIPFDAKIRLDLPNFKHFSTYVKLLASAGLRLNPFLCLFWMSDIAEIHSLCSDKVLREKMDKYLDIQSLQTSLPLHVAVYPQNHQGGALYDMFSGVKDLFKTEVLGKENRLAEFLHIQSLSENEQKEMILASAAIPLLFEAQKRAGGRYTDGGQAGMLKSQGNTPIEPLIKAGCTHIIVVHLDGGSLWHRHDFGGVSVIEIRPSIDMGGFNQMFDFSKVTIDKLSQAGYQDVKTALSNVKESLSAMYAMRHSTDKLMTKVADDVGKNNMDSAMARLRALK*	mmseqs_cdd	nonviral_gene	C2	5087	29750	34837	GCA_009378535.1|RCJP01000007.1@region_29751_34837@tool_cenote_CDS_0006	cloud	direct	high	1064	0.999	GCA_009378535.1_00487
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	294203	294466	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	1	264	GCA_009378535_1_6_255	GCA_009378535_1_6_255	-	422915	.	pfam03692	Putative zinc- or iron-chelating domain. This family of proteins contains 8 conserved cysteines. It has in the past been annotated as being one of the complex of proteins of the flagellar Fli complex. However this was due to a mis-annotation of the original Salmonella LT2 Genbank entry of 'fliB'. With all its conserved cysteines it is possibly a domain that chelates iron or zinc ions.	MSLLPFPCTACGQCCRNVHLSDQTAYLDRGDGTCLHFNETTKLCTIYDDRPLICQVENYYKKHLSEQITWDDFVQINLSICQKLQNH*	mmseqs_cdd	nonviral_gene	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0001	cloud	direct	high	263	0.996	GCA_009378535.1_00888
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	294463	296088	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	261	1886	GCA_009378535_1_6_256	GCA_009378535_1_6_256	-	422915	.	.	hypothetical protein	MQAQQFDWLSELNQTITHSLVTTFGLDLVLFKDKVGGNVDTIHNVRQGVWATQTERLAYENRDDYDSYAYHRDQGFIEKGRQDKALKKSGKLFDVYRQKIMLPQEKHHVDHIISAKEIHDDPGRLLAESDGVKLANRSKNLQSTLDKINLRKNKNPVNVFLDDSLPNSVENLNKKICQTKTQLANLPKNASNKEVLELKRKLQHYQKEVGTLSSIDQKAMRKKDFEARNDINDQINQAYYGSSKFLRNTAEDALSQGIRMTERQMIGMVLAEIWFEFTEFLPRIVDRCKKNFKFSKFWEETKKAFLNVIERVKKRFKEFISKFKDNMLSGIFSSLSTTIINIFATTSKQLGKLLRESWTGIVQVVKLITFNPNKLSWGELTREVIRILMATVSTILGVMLYQHLITLLSAVPYGDLIASFLSAFATGLLVLGTTYFIDHSSIMKKVWKYLDSLKSKYDNFLEHIKEINAELDRYVTELARIEFNLNTAELHALASALKASSNEYEKNIILKQETTRRNIKLPFEMGDKSSTIAWLKTKTKK*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0002	shell	direct	high	1625	0.999	GCA_009378535.1_00889
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	296170	297888	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	1968	3686	GCA_009378535_1_6_257	GCA_009378535_1_6_257	-	422915	.	.	hypothetical protein	MPLPFILGGAALLGLAGVALAIDGMDNKEKAEKTLEEAKTRYEKSKQRLESEQEYTYNHLESLGEQYIEIARDFEKFEIIVDELLDRLDINKDKHLTLNLPEYKLNQIKALTVNFNSAATNIAGGAAAGTLASFAAYSGVMAFGTASTGTAIAGLSGAAASNATLAALGGGSLAAGGFGIAGGMAVLGGVVAVPALAFMGWAYSSEAEDALNKAQEGLKEVILFEEKAEAAVEYLDKMYWYIDEIISGVRDIYEQFQHYYDDLEHVSELIASNKVDILKEKEHLIVSIQNGYALAAILTNIMTTPIFKIKENSAYVNIYNLAKSRKSRAFPKLTHLTSEALLDALDITDNHPDYYELESAMDALVDLLDEAKSELEDDLENSKEYLGNSVSLDDDIYAAIDGQKELRQDESLDYASNYTFFEAITAVNEEEFEDAIDELDDDLEDMDRDDIMVLVAEIRDNIKHLVIPMAQKGIEEDKEDAIDTFKDNLESTIEKVFEYEYEELEAITQKDIELIQELVLEHITHYTDTIYPYSSLESSNLIFEQVDGMNVLNEDEMNEVLASAEEASAQYA*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0003	shell	direct	high	1718	0.999	GCA_009378535.1_00890
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	297899	298285	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	3697	4083	GCA_009378535_1_6_258	GCA_009378535_1_6_258	-	422915	.	cd07311	terB_like_1	MFLHNLNLDQQGVLLDLARQTAQADGEISHLETQMINVLRQQCNPNVTVKSTSQADLASIFDTPIAKYSLLLELLGIAHANNEYHSSEKDIIFKVSQALGVTNDKLQALEAWVEKQFLLTHEVQELLK*	hhsuite_tools	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0004	shell	direct	high	386	0.997	GCA_009378535.1_00891
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	298305	299180	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	4103	4978	GCA_009378535_1_6_259	GCA_009378535_1_6_259	-	422915	.	COG2378	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains  [Transcription]. 	MDNKHERLADRFADIFMRLSSHEKLDTHELAAEYQVSDKTIRRDLLRMERYLPLVRKPKMVYLDKSKQFNLSEKEFGELIRLIGVHRLIPNMDIQFLRDMLKQNTRQLQIVGYEYENIEPFFDIIPLIKSAIAEQQIIRLDYKNQTRLVHPYKLLNHRGCWYLINTQNNEIKTFRLSKILNLSVLQGQSFVPNEEIWQLIDQGQGIWFGHQLTNVLIKTDEYARGYFLQKQILPNQKIIKSLEDGGLLIQCSVYQKQQIFPMIRSWIPHLTIIEPAEWRDDFVSQLKSYLN*	mmseqs_cdd	nonviral_gene	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0005	persistent	direct	high	875	0.999	GCA_009378535.1_00892
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	299281	299538	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	5079	5336	GCA_009378535_1_6_260	GCA_009378535_1_6_260	+	422915	.	PFAM:PF10078.8	transcriptional-regulator	MTKSIHSDQMIALRAWLKAERRNQKLSMRALAARMDRPHSFVQRVEEGDRRLDVVEYIWYCGALGINPSLGLQIILECNKVNITA*	phrogs_hmm	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0006	persistent	direct	high	257	0.996	GCA_009378535.1_00893
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	299983	300171	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	5781	5969	GCA_009378535_1_6_261	GCA_009378535_1_6_261	-	422915	.	.	hypothetical protein	MELLARIELATSPLPRECSTPELQEQTNNMERVAGIEPAPSAWKAEVLPLNYTRRVVYLGRE*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0007	.	unmatched_CDS	none	0	0	.
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	300258	301283	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	6056	7081	GCA_009378535_1_6_262	GCA_009378535_1_6_262	+	422915	.	PDB:1Z19_B	Integrase	MKLPKPRKRGHSYRIELMINGKRLSATRDTAKECEQWAASKLLEHKAGHNDEVVESSITVTLTLSELLKLYHENIGKYKRSQSDKFTRRILLRDYPELSQKQIHQITPKDLTLWRNSRLQSVKPSTVKREISYLSAVFSYAVKELFILTINPFSQVSKPTSSKPRNRRVTDNDIRLLKQAVDWTGTKPSTSNQWVVWAFLFAIETAMRRGEILAICRTDIKENYIHLTKTKNGESRNVPLNKTAKELVVLALSAHQDNQLIPASVNVNTFRLAWERVRSKAKVKDLTFHDSRHEAISRFVYKYKMPVETLAKITGHKDLKILLNTYYNPTINEVLQMMSED*	common_virus_hmm	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0008	cloud	direct	high	1025	0.999	GCA_009378535.1_00898
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	301284	302369	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	7082	8167	GCA_009378535_1_6_263	GCA_009378535_1_6_263	-	422915	.	PRK09101	ribonucleotide-diphosphate reductase subunit beta; Reviewed	MYSVFNPNPNDATQEPMFLGESVNVSRFDKQRYPIFEQLTEKQISFFWRPEEIDVSKDRRDFIELPEHEQHIFVSNLKYQTLLDSVQGRSPNVVLLPLVSVPELETWIETWAFFESIHARSYTHIIRNIFNNPSEILDDIVINPEITKRAESISKYYDELHSLSLEYQQGKRVDMYELKKRLYLCIMSVNVLEAIRFYVSFACSFAFAERKVMEGNAKIIKLIARDEALHLNGTQHIISLLQKEDSDYKTIANECSQEIYDIFWSAYEQEKAWIEYLFKDGSMIGLNKDILTQYLEFITGLRMKAIDLKPFFSTSNPIPWINNWLSSDNVQVAPQETEITSYVVGQIDSELQDDAFDNFEL*	mmseqs_cdd	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0009	shell	direct	high	1085	0.999	GCA_009378535.1_00899
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	302384	302764	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	8182	8562	GCA_009378535_1_6_264	GCA_009378535_1_6_264	-	422915	.	.	hypothetical protein	MNKRKLISELKTHHMYISAMDTKKSESVAAGIAIAINLIKKHEESEWIDTLDELPPTGKLVLLAADLGEDSLVPVVGQLIEYDVNFVDEYVDFTETLEWLNSEGDSFVAEFNDVKYWLPIPEFPKH*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0010	shell	direct	high	380	0.997	GCA_009378535.1_00900
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	302765	303241	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	8563	9039	GCA_009378535_1_6_265	GCA_009378535_1_6_265	-	422915	.	.	hypothetical protein	MNNQLFKEGDRVYYPLMSDKILTLLKHGEDTVSVDLGVGNFFEPNGKKFQHHLAQSIFHATQLNYELLTNLYPHIQFEEPIPTSVTTIKKMLDDGYAYVICSILLPKGVVKDIIRGYDDKVLFGEYDNYYYDEAIPLDNYTGKIIVDYKDGKPVLEDD*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0011	shell	direct	high	476	0.998	GCA_009378535.1_00901
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	303246	303503	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	9044	9301	GCA_009378535_1_6_266	GCA_009378535_1_6_266	-	422915	.	.	hypothetical protein	MTDLEMIGQAYIVWYQCNARAHRAQQELSIYMDDPAPTIGEYTDEAFKKTLSSLSKSLLTCLQETSKAYDVLDNLMLNYLTKHVS*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0012	cloud	direct	high	257	0.996	GCA_009378535.1_00902
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	303500	303928	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	9298	9726	GCA_009378535_1_6_267	GCA_009378535_1_6_267	-	422915	.	.	hypothetical protein	MNTEEERPFLKVEVSLDDIASQDWFTEAIEEGISILLCSNEPTLRKYILERRVLLNFTDIRTLVPEYYDQVRLIMKFNGSDLGFELPEEWGMTMTEINTQNQTKELDLDNMGNLLDCFDGETVEGGVDSENDEGCEGGACKL*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0013	cloud	direct	high	428	0.998	GCA_009378535.1_00903
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	303930	304238	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	9728	10036	GCA_009378535_1_6_268	GCA_009378535_1_6_268	-	422915	.	.	hypothetical protein	MRSITLTETVDIDLPVCEIANQLDIEDFVSCFYCLNYEDREAILQEISGNGTSREVIKSLINTLERHGLHEMLIDLADLASEISHQTTYPVLAAIKQLERKL*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0014	cloud	direct	high	308	0.997	GCA_009378535.1_00904
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	304287	304502	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	10085	10300	GCA_009378535_1_6_269	GCA_009378535_1_6_269	-	422915	.	.	hypothetical protein	MAKKSVYNSTRYIVLNEASQVESSTTVNKLSPATFEVFGSEEPNEDATLLGTLKKVTLTISVEDYEPPSKA*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0015	cloud	direct	high	215	0.995	GCA_009378535.1_00905
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	304505	304843	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	10303	10641	GCA_009378535_1_6_270	GCA_009378535_1_6_270	-	422915	.	cd22268	double-psi beta-barrel fold of endolytic peptidoglycan transglycosylase RlpA and similar proteins. Endolytic peptidoglycan transglycosylase RlpA (rare lipoprotein A, RlpA) is a lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. It adopts a double-psi beta-barrel (DPBB) fold and is one of four SPOR-domain containing proteins in Escherichia coli (including FtsN, DedA and DamX) that bind peptidoglycan (PG) and are targeted to the septum during division. It directly interacts with the divisome protein FtsK in vitro, and deletion of the rlpA gene partially bypasses the requirement for functional FtsK, a large, multi-spanning membrane protein that facilitates double-stranded DNA translocation during division and sporulation in E. coli and Bacillus subtilis, respectively. In Pseudomonas aeruginosa, RlpA contributes to rod shape maintenance and daughter cell separation. The separation of daughter cells requires extensive PG remodeling. It has been suggested that amidases and RlpA work in tandem to degrade PG in the division septum and lateral wall to facilitate daughter cell separation.	MKLLTLFLGLTLSLSATAHYATWYGDKFHGRLTASGERYNQNALTCASNKYKFGTKLIVTNYATGKSVVCRVNDRGGFNKYGVSLDLSKAAFTKISPLSKGKIKVIIVPIKE*	mmseqs_cdd	nonviral_gene	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0016	cloud	direct	high	338	0.997	GCA_009378535.1_00906
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	304858	305007	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	10656	10805	GCA_009378535_1_6_271	GCA_009378535_1_6_271	-	422915	.	.	hypothetical protein	MDKDNLVFVIAACVTVLILFVFIGFLVRYDTVRECIRVNPNNAEICAQL*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0017	cloud	direct	high	149	0.993	GCA_009378535.1_00907
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	305021	305371	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	10819	11169	GCA_009378535_1_6_272	GCA_009378535_1_6_272	-	422915	.	.	hypothetical protein	MKITLDNSELNQAVIEYLNNQGLTLNTDKVHIEITSEGVKIDTNNANKQETKDSVQEPVKPNKPTNKPKDSDTQAKQEKPAKALFNASDDTSDDILEDDTPTIPENQVEKTRKLFQ*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0018	shell	direct	high	350	0.997	GCA_009378535.1_00908
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	305376	305909	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	11174	11707	GCA_009378535_1_6_273	GCA_009378535_1_6_273	-	422915	.	PFAM:PF02075.16	RuvC-like-Holliday-junction-resolvase	MSNQPMTIIGFDPSLRNWGYCIATFDETNKQLEFHQGGVLHSKPDDLERQNLKDLQSATQLYNQLKGLVNEHKPKYLVAELPVGSQSSRAMVSYATCICLSAVLAYADGSNTIPLLTVTPNQVKVAVGKRDATKDEVINWVTSNYPNTQHWLKDVPKTKQEHICDAIVATHIALLEG*	phrogs_hmm	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0019	shell	direct	high	533	0.998	GCA_009378535.1_00909
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	305906	306106	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	11704	11904	GCA_009378535_1_6_274	GCA_009378535_1_6_274	-	422915	.	.	hypothetical protein	MTTHTILETAQDVIELVTEWHENNQWLLSQRIAHTENFEIAQELQTIKELYSELPFEILFISKVDE*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0020	shell	direct	high	200	0.995	GCA_009378535.1_00910
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	306116	306811	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	11914	12609	GCA_009378535_1_6_275	GCA_009378535_1_6_275	-	422915	.	UniProtKB:A0A0K2FI26_9CAUD	Single-stranded-DNA-binding-protein-	MSFLSNLSYQDNINDDKDTLGGGFTILESGIYDATVKYAYLSQAKSGAGAVNFEFDVDGKTIKETMYVTNRDGKNYYERNGQRNYLPSFVNADAISLFTTGKALFEQKEETKVINLYNFDVKKEVPTEVPMLTAMIGKTVKLGILKEKVFKQAKDNSGNYVDTDETREQNSINKVFSAKDNRTVNEVRAERESAQFMNDWLERWEGEVSDKTANKKSTASAPAKKTSSLFA*	common_virus_hmm	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0021	shell	direct	high	695	0.999	GCA_009378535.1_00911
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	306844	307365	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	12642	13163	GCA_009378535_1_6_276	GCA_009378535_1_6_276	-	422915	.	PDB:1A73_B	Endonuclease	MSIIESTLTHELLTSYLKYNETKGEFTWIKRPNKNIHLHTRAGTKNSAGYRVISLFGKRYLEHRLAWFYVHGEMPKHEIDHINQIRDDNRISNLRQVTRSENQRNKTRKDSRVDEVGIWWCRRRKRYIAEITLNGKKVYQKSFKDIDEAIQQRKAKALELGFHDNHGKTQVQY*	common_virus_hmm	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0022	shell	direct	high	521	0.998	GCA_009378535.1_00912
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	307428	308159	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	13226	13957	GCA_009378535_1_6_277	GCA_009378535_1_6_277	-	422915	.	PFAM:PF13479.5	AAA-domain-protein	MTQINDHLVLVCGKSTMGKTTCLRTLRNPEGVMYLNCENGKRPPYREANKFKMYTITDPFQVYEAFTHAETQSDVHTIVIDSLTFLLTMAEKQIVHTAKNPQQAWGRFQNYITDLMLDYVAKSTKKIIFTAHIVDQINEAEMVKETFVPVKGALKAQGIESFFNVIISVKKIKINDLEGINTPFLNITDRERELGYKHCIQTRLTKDTVTERLREPLDMWTESETFIDGDIQIVLDRLDEYYG*	common_virus_hmm	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0023	shell	direct	high	731	0.999	GCA_009378535.1_00913
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	308223	310382	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	14021	16180	GCA_009378535_1_6_278	GCA_009378535_1_6_278	-	422915	.	PFAM:PF13148.5	DNA-primase	MKPIEEMHYHPTSERLVEILQTKTQNNNPLFFRVIVAYYLALMASHMRVSIKGWTGKKTIPVNLYGIALSPSGSGKGHSTSLMENEVINTFKSVFLEHTFPITAEQNCESLAAKRATRNGTDLDDELHKLGKAFQELGALLFSFDSATVPAIKQMRQKLLMANAGSCNLQVDEIGANFTGSIEALTAYLELYDKGLIKDKLVKSSAENTRFERIEGYTPANMLLFGTPTKLLDGARTEEQFYEMLEMGYARRCFFGYADRASKQINLSVDQVMAQLFNEDDDDFIEELSDKFGLLADLSLINKTVSLPTASVELLIEYKLNCEKASSEFSELESIKKAELEHRYFKVMKLAGVYAFIDQQDEISPQHIEYAIKLAEDSGQAFARLMTPQRPYIKLANYLAQTNTQVTLADLDEDLPSFRGSKTQKDEQIMMAIAWGYKNNIVIKKSFTDSILFLHADTIQETNLDNLIVSYTNNPDMTSDYFNDTVSIENLTQLVQMADFHWLSHHVEHTYRREENAIAGFNLLVLDVDSSTKLTTAKMLLKKYTAIYYTTKRHQENGEDRYRIILPLNYTLKLDSKEYKELYNNVINSLPFEVDTQCGQRAKKWLTNPNAEVHTVEGELFDILPFIPKTSKNEEREKLLQDQSQMDNLERWVINNTGDGNRNNMLLRFAMILVDAGFNFDNIKDKVISLNNKMVDKLDEIELHSTIFHSVAAKLTSLA*	phrogs_hmm	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0024	shell	direct	high	2159	1.0	GCA_009378535.1_00914
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	310379	310540	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	16177	16338	GCA_009378535_1_6_279	GCA_009378535_1_6_279	-	422915	.	.	hypothetical protein	MNGFMTVTALNLILVYCFYYFTLDAKSGIYIYTYLMTAFMVYRFVHIYCGKLP*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0025	shell	direct	high	161	0.994	GCA_009378535.1_00915
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	310537	310635	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	16335	16433	GCA_009378535_1_6_280	GCA_009378535_1_6_280	-	422915	.	.	hypothetical protein	MSDAHFMSFSLIGLTIFFYLLHELMSFWERRK*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0026	shell	direct	moderate	98	0.99	GCA_009378535.1_00916
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	310639	310896	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	16437	16694	GCA_009378535_1_6_281	GCA_009378535_1_6_281	-	422915	.	.	hypothetical protein	MKINDYLEIHQDDLPCHCRVSNLSKEYTSQHGESLLVISIVVEPMYKNIYPHTQEMAEYMEENKDTYIRRALADNGKLYDYAIKE*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0027	shell	direct	high	257	0.996	GCA_009378535.1_00917
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	310893	311855	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	16691	17653	GCA_009378535_1_6_282	GCA_009378535_1_6_282	-	422915	.	PDB:4IC1_D	Exonuclease	MNYTNRQNIPLPLAVFLATDNYDGSDDVISATTLLKPIRQIILSQRLSSLDNFVDIADLVSSRMGSAIHTAIEHAWLNPNDALKSLGFNDKVISKIKINPEHANPSDINIYMERRSNKTINGYTISGKFDFVAEGQVQDFKSTSVYTYLNQTKTDDYKLQGSIYRWLNPDIINKDYMTIHYIFTDFNKAESFRNKNYPPSRVHSQKIPLLSISETEQWIKAKLTQLDRYKTKEESELPRCTDEDLWRKPTVYKYYKDPNKLDRSTKNFNTMSEAVAFMVSKNNQGIVREVKGQVVACRYCPAFHLCTQKDSYINSGELIV*	common_virus_hmm	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0028	shell	direct	high	962	0.999	GCA_009378535.1_00918
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	311963	312424	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	17761	18222	GCA_009378535_1_6_283	GCA_009378535_1_6_283	-	422915	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MNQNKVFLAFYKGKADNRLYHFYDTITRLFTRGLYSHCEIVISKQDDLYECYSSSIRDGGVRVKTMKLDTNHWDLIPLNITKEQVISFYEQTANRSYDLLGALGIVLGLRQHADKYFCSEWCYDAITYKQDGWRFSPNDLYALFPLIQDKPKE*	phrogs_hmm	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0029	cloud	direct	high	461	0.998	GCA_009378535.1_00919
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	312411	312977	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	18209	18775	GCA_009378535_1_6_284	GCA_009378535_1_6_284	-	422915	.	PFAM:PF14301.5	tail-protein	MHHIKLINDKGHFEFIHEDFLYLYSDTADFIAITQEDYQTYVQSINQELIYQDGKIISLNNQISADEIKQTNQELIWSAIKDKRHNNTRGGVYISSVDKWFHTDESSRIQYLALITLPSLPDNLQWKTMDNSFITLTRPLLTELTSAMLLKEQQDFMNAEQHKQRMMQADNPLEYDFSDGWSAIYESE*	phrogs_hmm	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0030	shell	direct	high	566	0.998	GCA_009378535.1_00920
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	312977	315949	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	18775	21747	GCA_009378535_1_6_285	GCA_009378535_1_6_285	-	422915	.	PFAM:PF05939.12	minor-tail-protein	MIYVKDNYTLENEQTVILLEAYPETLFTNTSDEEAVLEYSHNGTNWDTLLTLAPNQKQSIAVTSRYVRQITKTTVEAKGVGSHITPLVLASNPLQSGTDFSDYITKPQLDSAIAKVNDKTALLATQEQLQTATQSQTRALTTETQQRHSQIDTINQTITRNKQAQDELINQKANQTALTALEAKVTANTTKNQSQDTEIAKKANQASLTAETTARNQAIETLKGTITANKQTQDSTINQLRADLNTKASQSDLATETSNRTSAIAGLNQKVATHKQQLDRQIQSLEQSKADKNTVNQQLSTKANQSQIDGINTAMEQKASKLNQVTAGNGLTGGGTLANSFQIALGLPSTISRSTTNSVTSTSHTHAIETATTTRAGIVQLNDNLTSTSTEQALTARQGKSLKEQLDRLSNTVDTNNTGMSVMVNTKVDKITSITTGEGLTGGGTLSENLVIALGTPSTITQSSTNTTTANSHSHAIDTATTTQAGIVTLSHETNGTNKTKAVSEFALGEVRRLVNNLNSTITSHTPNLTTLAWNSITDKPTTLAGYGIIDAISRNTDTEITSLLTINKSDSYIQGKTNNTRKWYLGKGSSFSDDIQLHNFTHSTQLNLTNNKIVASHDLYVNDSKVITANDTTVFVTPDALNQGLAAKAAINHQHTIAEISELQNILNSKLNSNASAISAQKLTTPRRINGIVFDGTQDITLPTTTNVSWSAISNKPANFTPSAHSHVIADITNLQRELDSKASSNHSHAWNSITDKPTTLTGYGIGNAMQTDTDSETTGLISINRADSYIQGKQGSIRRWYVGSGSSSNHNVQLSNSTHNTQLELTNDRVTSNKALYVGTRRVLLEGDEITSTTAQPTNTAVRVTNHPATALTNNASLETTTFVYSNGRIVHRFIYKNLRQPAFNSITSGGTHVRTLTINLPTAMPRHITQVNAYFYRPEFTDASFPLIISHKANDISNSSINLQISGTARGVSFSGILDLVIIVEGY*	hallmark_hmm	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0031	cloud	direct	high	2972	1.0	GCA_009378535.1_00921
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	315997	316317	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	21795	22115	GCA_009378535_1_6_286	GCA_009378535_1_6_286	-	422915	.	PFAM:PF07659.10	phosphofructokinase	MTLEQTLEQRKNTHGNFKENSAISIGLKSIIRDHGNFYFMPRYQQEALDMIAHKISRLIAGDSYFIDTWRDIAGYAQLVVNELADEPKATDVVQQYTKADQVKLPL*	phrogs_hmm	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0032	shell	direct	high	320	0.997	GCA_009378535.1_00922
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	316332	316550	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	22130	22348	GCA_009378535_1_6_287	GCA_009378535_1_6_287	-	422915	.	.	hypothetical protein	MNPQQQQRKQLRQLFETNTEGYIFLSQLKKISSSDLMIRDIAHYYDYVPVYRNKASTKIVAYKHHTITDDIF*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0033	shell	direct	high	218	0.995	GCA_009378535.1_00923
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	316525	316779	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	22323	22577	GCA_009378535_1_6_288	GCA_009378535_1_6_288	-	422915	.	.	hypothetical protein	MKYYKIKPLTWLDNSSIGMTHTYHYRPEHDRYRLTIINKINPTARNILMDFDSINEIKEFTNKHHILNSSYFLEKVNEPTTTTA*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0034	shell	direct	high	254	0.996	GCA_009378535.1_00924
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	316779	317126	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	22577	22924	GCA_009378535_1_6_289	GCA_009378535_1_6_289	-	422915	.	.	hypothetical protein	MPKKLNKRCKTRQKVFKGYLKIPIDTDCTAEELNAKSVRTGDWIYHSSKILKRGIKRHWYINLYLYNVIGEFTLIHYKTAKVDKSYFNIVIDEALVEATKHPLIDYSKSYMTVSC*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0035	shell	direct	high	347	0.997	GCA_009378535.1_00925
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	317077	317796	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	22875	23594	GCA_009378535_1_6_290	GCA_009378535_1_6_290	-	422915	.	TIGR02170	thymidylate synthase, flavin-dependent. Two forms of microbial thymidylate synthase are known: ThyA (2.1.1.45) and ThyX (2.1.1.148). This model describes ThyX, a homotetrameric flavoprotein. Both enzymes convert dUMP to dTMP. Under oxygen-limiting conditions, thyX can complement a thyA mutation. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism]	MTLSTAKVIAHTHPTKDIPTKTANEFIAYVARVSNPSNQDNTETSDKLINYLLNHKHFSPFEHYYLTLEIETPKDISIQLLRHRSFVFQEFSGRYQDINAMDNPFIIRETRLQDSKNRQNSLQNTDEALDSAWKFAQKELLRQAQELYKNALEQGIAKEVARSVLPIGLLKSRLYITGNVRSFIHYLTVRLDPTTQKEHRELAIAIYDSLLPYFNLDTVKELKDAKEAQQALQDKTKSI*	mmseqs_cdd	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0036	shell	direct	high	719	0.999	GCA_009378535.1_00926
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	317927	318295	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	23725	24093	GCA_009378535_1_6_291	GCA_009378535_1_6_291	+	422915	.	.	hypothetical protein	MPNSLTDISFLVKVFAVVVAAVFAMSLTGEIDKEGKLHLSLIVLIKFTFSAVFGFFAGSWLIEFNGWLHLSPISQGFIMMLVSLFGMTAIGIIYQAVLLSTTNKTLPQIITEIKETFKAIFK*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0037	shell	direct	high	368	0.997	GCA_009378535.1_00927
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	318304	318888	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	24102	24686	GCA_009378535_1_6_292	GCA_009378535_1_6_292	+	422915	.	CDD:pfam11860	N-acetylmuramidase	MSKLITDEQIKALAKQYDIDVACLKAVIEVESSGRGFLNGLPKILYEPHIMYRLLTQKNKITIRGKLTKEKPQLCYPKWGTYRYGLSSSQHGRLEQASQYDRDTALESCSWGMGQVMGFHWKSLGYPSLQSFVNAMYKDEASQIDAMLRFIKTNKLITPLKQCQWHIFAKGYNGAGFAKNQYHIKLQKAFNKHK*	common_virus_hmm	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0038	shell	direct	high	584	0.998	GCA_009378535.1_00928
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	318948	319403	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	24746	25201	GCA_009378535_1_6_293	GCA_009378535_1_6_293	-	422915	.	COG4696	Predicted phosphohydrolase, Cof family, HAD superfamily [General function prediction only]. 	MNTNNPVTAIIDWFKKAKPQPSIKNIFTQLGCHFEEISEMLDTIPECEVMADEMNTAAINLKTADIDVYGEQMENTISAIDKVELLDSLCDQIVTALGVGYDLGFDMEGALWEVIKSNYSKFDDDGNPIFDENMKITKGNNYFKPNLEKYI*	mmseqs_cdd	nonviral_gene	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0039	shell	direct	high	455	0.998	GCA_009378535.1_00929
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	319390	319635	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	25188	25433	GCA_009378535_1_6_294	GCA_009378535_1_6_294	-	422915	.	.	hypothetical protein	MYHRKLEKYKEYEGMKNAIVGKGELIYVSTPLGDAYRAPCGALIYDRDEALEYARKLDTLIRKNTVLFTQRKLKGKAHEYK*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0040	shell	direct	high	245	0.996	GCA_009378535.1_00930
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	319705	320310	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	25503	26108	GCA_009378535_1_6_295	GCA_009378535_1_6_295	-	422915	.	COG4112	Predicted phosphoesterase, NUDIX family  [General function prediction only]. 	MINDKPVLCTTKEALLELNIPTEGSHIISIPLEKVQNLPLHFISQDIVDVDITVGEHYPQIVPYVVLTTVNEFLTYYKSDNVGEQNRSIGFGTHITYDDQKSSLTKTMIDAVVKDLKRKLDYDTVDELTFPEEVFVLVKNDHQTSRLHVGILLALEVKIDEVFLDDSIAGIKWQTLDRLVSHIDEYQPWSQLIIKTFVDSE*	mmseqs_cdd	nonviral_gene	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0041	shell	direct	high	605	0.998	GCA_009378535.1_00931
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	320310	322820	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	26108	28618	GCA_009378535_1_6_296	GCA_009378535_1_6_296	-	422915	.	PDB:2KFZ_A	DNA-polymerase	MLSCDFHEKPDVAILIKGSYFDETKLNRYYVQPLSKLGVNQLMALELVYPEKGKLSISAARKNILKLLPALANHGIKYLYIADATYFKALTGQNKADTHLGYVLPCKLKGYEHLQVIFGINYGQLLYTLNASTKLDLTLQTLAEHYQGNYVTRGNIIKTALYPTDDEIDDVLARLKQYPALACDIETTGLELDNELYSIAFAWSQHEGCAFKVINKRQLKLFFESYQGTLIFHNATFDIKHIIYHCFMDNPRDFKGMLHGLHTMCHNIEDTKIIAYLATNNTQGNTLGLKELSHEFVGNYAIDVKNVLDHPLETVLEYNLKDTLATYWVFNEYKPKMLSDNQESIYKHIMLPSIKTIIQIELHGMPMNMDKVVIVKKQLQNQANDALEQIYASEHVKAVTHELQTKELEKINSKLKTKQHTLDKVKDLQFKPNSTAHLAILLYDYLGLPILDYTPNKQPAVGAGTIEKLIQHTQDDTIISLLTALLEYAKVQKILSTFIPAFEKAQEKDNWHYLHGSFNLGGTLSNRLSSSNPNLQNLPSGSTFGKTIKQCFQAPDDWLFVGADFNALEDRINTLLTKDPNKQKIWIDGYDAHCFRAYYYFTNQMPDITNTKESINSIKHKYPELRQESKAPSFALQYGGQYFTLMKNCGFSESKAKEIEANYHKMYEVSDAWTQRKLEQCAKQGYIDVAFGLRIRTPVVGKTVLNTSKTPYLASAEARSVGNAISGQSYCQLTNRAINEFMERVWASEYQYDIMPVCLIHDAIYLMIKNDVEIVKWVNDNLIDCMNWQELPEIQHDQIKLEAELGVFYPDWSNEITLKNHISVNDIIATCSEGVA*	common_virus_hmm	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0042	shell	direct	high	2510	1.0	GCA_009378535.1_00932
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	322813	323271	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	28611	29069	GCA_009378535_1_6_297	GCA_009378535_1_6_297	-	422915	.	.	hypothetical protein	MANTRDRAHLGIKIIRDILSPLLKQKNDILTQLLDAHFERTGSRIAIYKGEIIAHNTQSKDPPKLLHKSLAGYVDSLHETEDRYNGYLRQMSRYITQQTHTHPNETVFHFFPVEVFQEYMGRPPDVKRTDEHIPEFLKEIIAEMKLLRSLYA*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0043	shell	direct	high	458	0.998	GCA_009378535.1_00933
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	323271	324527	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	29069	30325	GCA_009378535_1_6_298	GCA_009378535_1_6_298	-	422915	.	PDB:3UPU_B	ATP-dependent-DNA-helicase	MSIVLNNEQELAKNELLEFILTPSELKQDSIIVLSGAAGTGKTTLLKSVIDSYKAIKELNKVINMPTTEVGWEFTAMTHKAARVLTRVIKLPVDTLHRKLMIRPTKDGYDFYGCTLYLEPSIDKEIIVVDEASYIDSKILNYICELVSKEPKLQFILIGDPYQLPPVGMDHAPVFNAGFKTVHLEQPVRQSNAPHLAQTVNTLRQAATQGKLHTINPDNKEVLYLDKKAWDKQIISTFSQGISAKVIQYTNHQVQASNKKINRQLTGNHEIEVSDTMVICGKLIDGSIIPLDSEVTVMSIDGYYPNGTAELQLPHYDLRLEDISGTMYKQLVIQDHKVYTELAKQQMTLRSGPPYIWHLRYAYACTVHKSQGSTYDEVFINLNSYRSVYKNNPAMALKLLYVAVSRARNKVYFTGDIG*	common_virus_hmm	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0044	shell	direct	high	1256	0.999	GCA_009378535.1_00934
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	324511	325686	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	30309	31484	GCA_009378535_1_6_299	GCA_009378535_1_6_299	-	422915	.	COG3864	Predicted metal-dependent peptidase [General function prediction only]. 	MDLQKLEKELSKVKIMLMGKSSAVFLAYAILRVPTVFSNKVATAATNGLRIEINPKFFQDLNQEERQFLLAHEVLHILLSHMTRLGTRDQKKFNIAADYVINTTLVHQGFTMIDGGFYDKKYLNWSAEQVYDDLPDDTISNLSSNTSNHSESGFGDSDIPSELSTQDIIYADPNEAEKVAQTAQEIAIQASLQASMQGAGSTVPHCVQRLLDELTKPKVNWKTVLRKYLFDLAKTDYSWRKPNRRLLTHGYYLPSLGGNSLSKISFAIDTSGSVSPRQFNEFLSEVAAVFKLLKPRELDILQFDHELQDHTTVKSLPQFTTLKFKGCGGTCPEVAVEAFMKTNSKALFVITDGYFWNEDAIPKPRQPVIWVIFDNPSFKAPFGSVIHVNST*	mmseqs_cdd	nonviral_gene	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0045	shell	direct	high	1175	0.999	GCA_009378535.1_00935
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	325702	326379	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	31500	32177	GCA_009378535_1_6_300	GCA_009378535_1_6_300	-	422915	.	PFAM:PF00308.17	ATPase	MYKLILDRQVGQYKLHDDVYIIACGNLDTDNAITYPLSSALVSRFAHFYIEPNTKEWTDWALDNDIDIRIISFLGFMPSHLYKFNPDSTEPYASPRTWEMLSKVLSELETIDTTHLPLLASLIGDGIAHEFMQYLKLADKVPKLEDIINNPEKVAVPSELGLQWATTSMVTSNIDNNNYAKLEIYLRRFNMEMQVVALRYIVKQYPNLVTKTSEWRKALASEIFI*	phrogs_hmm	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0046	shell	direct	high	677	0.999	GCA_009378535.1_00936
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	326441	326632	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	32239	32430	GCA_009378535_1_6_301	GCA_009378535_1_6_301	+	422915	.	.	hypothetical protein	MYFYIDQTISKPSALPVRAVTVSTTIGLWCTPFRDSRWTFKVLLGNFLFLKNLQYYQEVRQRI*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0047	cloud	ambiguous	low	73	0.38	GCA_009378535.1_00937
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	326559	327137	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	32357	32935	GCA_009378535_1_6_302	GCA_009378535_1_6_302	-	422915	.	PFAM:PF05551.10	homing-endonuclease	MSEIWKAIKNYEGLYEVSNKGSVRSIDRYAPTKNPNVLRLIKGQPRKLFPNRKGYQTVVLSKSNKLKTFTVHQLVAQAFIPNFIKGTELNHIDGNPKNNDISNLEVSNPSHNQLHAVRTGLRKHNATSKYRHVSYIKNPRAKKRWAACIKLAGKSSFGWKTFMTEEEAAKYADELLDSIGDSSRIRNFPKVP*	common_virus_hmm	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0048	cloud	direct	high	578	0.998	GCA_009378535.1_00937
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	327271	327606	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	33069	33404	GCA_009378535_1_6_303	GCA_009378535_1_6_303	-	422915	.	PFAM:PF01637.17	ATPase	MNITLKQAEKLMYPLLNNKIVPFLHSSPALGKSSLAKAVAAKAKLKVIDLRLTELDSSDLNGLPYFNEGKAQYLPFNTFPIQGTEVPEGCQGWLLLLDELNSALPSVQSAA*	phrogs_hmm	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0049	shell	direct	high	335	0.997	GCA_009378535.1_00938
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	327642	327926	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	33440	33724	GCA_009378535_1_6_304	GCA_009378535_1_6_304	-	422915	.	.	hypothetical protein	MTCTLIHKYELLYKLEYTPIHPRYELDTEFDSIDGKLTFSISTDDTHDVAIRLTFKFDIDADNMLHIHITGLNESLLNEFLTYLAICGIYYKLQ*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0050	shell	direct	high	284	0.996	GCA_009378535.1_00939
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	327942	328322	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	33740	34120	GCA_009378535_1_6_305	GCA_009378535_1_6_305	-	422915	.	.	hypothetical protein	MGLDTYLYAIAEDKDNHDEEDRYSVKGNLEDIAYWRKCYPLCDHFLSKKDYLLDEDGNCEYIPITQDELSEFFELSLESYFDNSVLGVDEEDEYSKMYDGDIETLRQAIDHMKQLPNHNFYLFNWW*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0051	shell	direct	high	380	0.997	GCA_009378535.1_00940
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	328332	328565	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	34130	34363	GCA_009378535_1_6_306	GCA_009378535_1_6_306	-	422915	.	PF07750.11	GcrA cell cycle regulator	MRLTKQEITWIANEFQSNRTVQEIAIDTGMSKQNVKRALAEAGLVNLSWYKTNEENKMLTFLKAKGINNTEQLLTQF*	hhsuite_tools	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0052	cloud	direct	high	233	0.996	GCA_009378535.1_00941
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	328575	328751	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	34373	34549	GCA_009378535_1_6_307	GCA_009378535_1_6_307	-	422915	.	.	hypothetical protein	MNTTQLLSTLPQGKITLFPCHTEPNLWFCDHETKECITSFYYDMTNQQWQFLSATKLN*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0053	cloud	direct	high	176	0.994	GCA_009378535.1_00942
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	328987	330195	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	34785	35993	GCA_009378535_1_6_308	GCA_009378535_1_6_308	-	422915	.	PDB:1MSW_D	DNA-directed-RNA-polymerase	MKVFNPMQYLAIDIANHFGLDKLNYEDRIDWVKTNQDNLEQFTDKAEEPILFAKAVNALRQSQAGIPTGHTVAFDATCSGLQLMSLLTNCKSGMSLTGLINPDKRSDAYTEITEYINYLLKQDGIDSVEVSRKDAKKAIMTSLYGSKAKPKELFGKQLLPYFYKTMDEYCTGAMDLLSWLLKSWQDIQVQSWVLPDGHTAYIPTMQQVTKRVSINELNYTPVVTYYENIASEKGIANAANVVHSVDALVLRELVRRCNYHKGELKTFLRLHTNAKETKQVDDTLWINERFKATGFASISFIEAIDYNTITKVSNELREALASICEHILSHPKFEVITIHDSFACSPVNMQRLREHYNNILVELYESHTLDDLLSQVYQTEITVNVGEKTLSNTIRNSNYGIN*	common_virus_hmm	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0054	shell	direct	high	1208	0.999	GCA_009378535.1_00943
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	330182	330466	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	35980	36264	GCA_009378535_1_6_309	GCA_009378535_1_6_309	-	422915	.	.	hypothetical protein	MLSNQIKYLSISVENLTKEEKSLLCSRALALSWSNPEAINSFCYSIRSNSIYSFCSATDEKSEEEYVCSSYQEFNELINLCELDRLLGINHESI*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0055	shell	direct	high	284	0.996	GCA_009378535.1_00944
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	330456	330716	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	36254	36514	GCA_009378535_1_6_310	GCA_009378535_1_6_310	-	422915	.	.	hypothetical protein	MRLHKNPIYIAANTINKEEKEILAELLQIDIPSNAKAIVYYSNSDSAMCFTIEVLKRLYDLIDSLDEFIDIVIENRMNHVVGLYAE*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0056	cloud	direct	high	260	0.996	GCA_009378535.1_00945
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	330718	330978	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	36516	36776	GCA_009378535_1_6_311	GCA_009378535_1_6_311	-	422915	.	.	hypothetical protein	MNNHYYYAIAADKLSKKDYQRINNSFFLSVNKPDPTYFIFNLQTERAFLVNYSFSLDNDLTIKFFPNLKALIEGIYTYRLDKLIGI*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0057	shell	direct	high	260	0.996	GCA_009378535.1_00946
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	330971	331234	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	36769	37032	GCA_009378535_1_6_312	GCA_009378535_1_6_312	-	422915	.	.	hypothetical protein	MNDKLYSVIKSTDLNQEHLEILKSDKKISPYVQNDDYIIYCKTRDYFFLFNLTPSVRILSDIYTDSNQFMERAAQYQLNRTLGLTDE*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0058	shell	direct	high	263	0.996	GCA_009378535.1_00947
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	331227	331493	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	37025	37291	GCA_009378535_1_6_313	GCA_009378535_1_6_313	-	422915	.	.	hypothetical protein	MEQNFRYIWLSLNDITDSEKDQLIELIGFYENNSKYIVYYPSIDFFLWQKEVPDLSKDKRDLVTNSFTEFMAIVNEYVLNQILGIDYE*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0059	shell	direct	high	266	0.996	GCA_009378535.1_00948
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	331589	331849	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	37387	37647	GCA_009378535_1_6_314	GCA_009378535_1_6_314	-	422915	.	.	hypothetical protein	MTIIKATLYSYYEKESITFYFYTRKSKIKVSKLVDEISKSLFISVDFTKDQYYSKTIKLEELFYANLENDEGQFLLTFDLINPTTI*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0060	shell	direct	high	260	0.996	GCA_009378535.1_00949
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	331864	332139	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	37662	37937	GCA_009378535_1_6_315	GCA_009378535_1_6_315	-	422915	.	PFAM:PF14216.5	ribonucleotide-reductase-NrdA-like	MKTKVVNKYKEPYDVYIGRGSKWGNPYPITANQDRKTVIQAYKKYLLNSPELLKDLHELKGKTLGCFCKPKPCHGDVLIELINQLDKPKSD*	phrogs_hmm	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0061	shell	direct	high	275	0.996	GCA_009378535.1_00950
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	332158	332340	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	37956	38138	GCA_009378535_1_6_316	GCA_009378535_1_6_316	-	422915	.	.	hypothetical protein	MIYTFDRYKNVSVNAGIIMLASSENESYSVGCLINDETIEQALNRLGIDFDTRYPDYIIQ*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0062	shell	direct	high	182	0.995	GCA_009378535.1_00951
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	332337	333293	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	38135	39091	GCA_009378535_1_6_317	GCA_009378535_1_6_317	-	422915	.	PDB:1MSW_D	DNA-directed-RNA-polymerase	MGLLYSIDSTGYQMNQRQLEILMHPKHVRRDVSEIIIKSFSKQIEQSVKAIHKWTEVSEYESKNTRKQVLSTLDIHKLVVDIFTTITMVTQKPLPYISVASQIAIDNMSKLDSIKTACELIALLQHTKLYVINKNYDTRLIESLVVLPKDAEITKRIRLSCFLPPMIEPPKPVNNNRQSGYLTINDHIVLGYKENQHNQRLSLDVINTLNQNKYVLDNYVMQNFEKPWFKEVLEECELSLLDTIDQQKYYDQTVTFEKYKEQLKVLTEIIKDKPIYFNHRYDKRGRIYTVGYHFNTQGTSYEKACINLCKQELITGEL*	common_virus_hmm	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0063	shell	direct	moderate	918	0.959	GCA_009378535.1_00952
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	333321	333446	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	39119	39244	GCA_009378535_1_6_318	GCA_009378535_1_6_318	-	422915	.	.	hypothetical protein	MKAYLIFVTLGFSTTVWADNAVEACKQVSQQGYSVTSCHPL*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0064	shell	direct	high	125	0.992	GCA_009378535.1_00953
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	333515	333754	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	39313	39552	GCA_009378535_1_6_319	GCA_009378535_1_6_319	-	422915	.	.	hypothetical protein	MTEFTTRTNATPADREPADHYVNVYFQDRQIGYLVLDKFVQLVEFLQKDEQNATKLIKNCTATYRERGKSTVSFDLSSL*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0065	shell	direct	high	239	0.996	GCA_009378535.1_00954
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	334389	334649	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	40187	40447	GCA_009378535_1_6_320	GCA_009378535_1_6_320	-	422915	.	.	hypothetical protein	MEQQVRKEKVQRTWLGNVFHAISKAFSTAGNLATATDKAAKNYGALAVTQSSRAVKKLDADIRKEYGVSLAEFNKEVEDMVDDLYD*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0066	shell	direct	high	260	0.996	GCA_009378535.1_00955
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	334926	335306	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	40724	41104	GCA_009378535_1_6_321	GCA_009378535_1_6_321	+	422915	.	.	hypothetical protein	MFNKVFMFTAGLALAISSHADVYLGSYQGYEYYLLPSKTKQVTRTKYEVQMERFVAQDKKVDGLAKGSYTLYRRYIECSNKTVATISWANYNKHNRLLDSKKMSHLKYYDIFPRSWGSALYDEICR*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0067	shell	direct	high	380	0.997	GCA_009378535.1_00956
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	335306	336427	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	41104	42225	GCA_009378535_1_6_322	GCA_009378535_1_6_322	+	422915	.	.	hypothetical protein	MYNRFENWQQWKYYYREQLKHPAGFEEMFVDKVLSQVAGLTPSDVIPQYHFVDDAGGNRYIDFMVLNEAKGYHLAIELDGLTKIQNGYNTLDYVRYQDMWVRQNALMRTGAVLLRFTNKDMFQRVGWVIQSVVDTLASQNKQYTTQQGLIQGYQTQIQALKNQATVTQQMKDTVAMLQEQVTQLQVKQSNESTKELDTQEWVMKPIPSVSEIQDEYAREEQKRLAATSNANATVTTKQGSSYRWVWVILAVVIAIFGYFVLSDDYVTAEEYIPPTPTTTAHEPYTTYVPVDNEVLPITQEPVSEYKAEQEHIQPPTTKPSSELPILADLGPIPTHDRSGRIENIERMDKEGYSERGTLTQMPDETRADRDRGY*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0068	shell	direct	high	1121	0.999	GCA_009378535.1_00957
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	336427	336888	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	42225	42686	GCA_009378535_1_6_323	GCA_009378535_1_6_323	+	422915	.	.	hypothetical protein	MADKDKASVLTEISHVISSAAESMNKSVQDWADKSKQKRLERTFSDINEAIRFLIDGKSPDEVENSFKNHAYLDNKVQYNYLKAGRWLNGYPVYVDDQQWVKFGYDYNGRHWGIEITDSFMIFVRDANDCKENYHSYADQVRQLDEMIDSFYN*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0069	shell	direct	high	461	0.998	GCA_009378535.1_00958
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	337048	337734	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	42846	43532	GCA_009378535_1_6_324	GCA_009378535_1_6_324	+	422915	.	PFAM:PF00292.17	terminase-small-subunit	MTLTVDVLKKSLPSKYKRNVNDDLLEHINTILDHPELYDDYRNNFLTYISVIQDGKYKLDDYLNAIKYCTHKLMGESNIDSFVKTFPKRYQSMIAKGYTAKEMSAHVAMYNKNKLVNTILEQSMIPTWVLNQDLYQKAINTQADLMLNAMSEKVRSDAANSLLVHLKPPEVRKVELDVGIKQNDEIEALRNITAELASQQRRMIEAGVITAKQNAETKLITKVYDHEA*	phrogs_hmm	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0070	shell	direct	high	686	0.999	GCA_009378535.1_00959
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	337821	339410	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	43619	45208	GCA_009378535_1_6_325	GCA_009378535_1_6_325	+	422915	.	PDB:4BIL_D	Large-Terminase	MANKQPKTVNEWLQEVDYSDLENYVPSKFAIEYVNFIKLVNGEEGEENKTPIIHYKMADSLVSGDKQIANMIFRGAAKSTFLGEYFFLYLAVFGELPNFGSVDLAVYVTDSIDNGVKSMRKNLEYRWANSEFLQKYIPEIKFTDIRWEFKNINGKTLIVKAYGGKSGIRGVKEKGKRPQIAVMDDLVSDDDARSPTVLGAIKDTVHKAIEYALHPTKYKKIWLGTPFNANDPLYEVVESGAWKVNVYPVCERFPCTRDEFRGAWEDRFTYEFVNEKYQTALALGKVDSFYQELMLQIMSDDDKLILDTDIQWYISNHLMDKKDNFNFYITTDFATSEKQSADYSFISVWAVNHKGYYFWVDGICARQTMDKNLDDLFRLVSQYSPLTVGVEVSGQQAGFIPWIQREMFSRNIFFTLASNSKDGSLGLRPNTSKLERFNIIVPDFKLKRFFFPMDMKHTPALKELLLELSQASVGGFRSKHDDAIDTVSQLAMMTIWAPSQETSYQKNNQGIWEDVLPMESHSNLSSYIV*	hallmark_hmm	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0071	shell	direct	high	1589	0.999	GCA_009378535.1_00960
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	339421	340173	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	45219	45971	GCA_009378535_1_6_326	GCA_009378535_1_6_326	+	422915	.	PFAM:PF07030.11	head-to-tail-adaptor	MIVREYLDYLSETELKNLNLTDPKTGEIPTRKLSRLMHLLQAGLRELSTRFDLQSENIPYHTKTAGIHTLDLKQAQKHHISSDVLAVNHILCVYAQTDDVLSANDLSNQTLEYLSEKSFQEKALKLNLQDTLYNPNEIIPFYCLVSPTKLQLYSPYDVAHYLINARVVLGVNDALQLTDKLPVPTAYYNALGLYIASVAFRGINNQLDGDINESMRYYQAYQQEIMMLEQQGIELDNQPQTHLFHAKGFI*	hallmark_hmm	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0072	shell	direct	high	752	0.999	GCA_009378535.1_00961
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	340170	342605	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	45968	48403	GCA_009378535_1_6_327	GCA_009378535_1_6_327	+	422915	.	PDB:5GAI_G	Portal-protein	MINPEQLQEQLAQEQLLQDPQANQALPDELMAMMSAMTTPKEEPKARQFKQAYSMPDDDFKAYGYSKLVKDGMTKTKKQKLTNWLNEPSVQDLKHDYQHAQSAQSKFISDLEKWQQLYQAPRFGGKNHKGSRITPKLIRKQSEWTSPSLSEPFLSTNNLFDVKPLTFEDVDRAKQNALILNRQFNTQLNKVSLVDSVVRQVVKNGSCVLRMGWVYQEKQITEKVPLFNYVPVPLEQQEQANQQFTQLEQLAQTEPDSYEALADEVKAGYEMSVEKGIPYIAEPAGFTEKQAKRVIVNKPTVDICNLKNVFIDPTCKGNFENAQFVVHAYESSLSELKKQGIYQNLGYLMEQHAQADNSIDKPSDDVFKFQDNARRKLTVYEYWGYWDIHDNGETTAIVCAWVGDTIIRMEENPFPNGKLPFVVFNYLPEEESVWGIPNAELLGDNQEILGAVTRGMIDLLGKSANSQTAFPKNFLDSANKVKYSTGQDYEYNQGFDPRVHVHTHTFPEIPNSAMMMVHSMNNEAESLSGVKAFSSQGISASHLGDSATAARGVLDAVSKREMSILRRISEGFIQMGRFIMGMNSEFLSEKEIVRITNKEFVTIRRDDLAGEFDLTLTISTAEANENKSQQLAFLLQTVGNTLGTGLTQLMLSEIAHLRNMPDLAKAIEQYQEQPDEMAQQLQQLEMQKLQAEIELMKSQAEENLAKAQVQSAKVGTEQARAESLQGDADNKALDFVERDSGIKQDHDLNKQAMINQGQNEKEMIKQQGLLDSQANQHDYNVLSQLQQHDLNQQAMTNEAQMQSILPPNAQQ*	hallmark_hmm	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0073	shell	direct	high	2435	1.0	GCA_009378535.1_00962
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	342617	342928	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	48415	48726	GCA_009378535_1_6_328	GCA_009378535_1_6_328	+	422915	.	.	hypothetical protein	MIDIDTLEQEKIALKRKIQLSRALSNLEHNKDFVTLFKMYYFNDYVLDSVAQLSTDKDNQASLYLGLEMVSQLQAELLKIKTQGAMAEQQLQELSAIPLDEYL*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0074	shell	direct	high	311	0.997	GCA_009378535.1_00963
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	342930	344033	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	48728	49831	GCA_009378535_1_6_329	GCA_009378535_1_6_329	+	422915	.	.	hypothetical protein	MSEIDYSTLSDEELAKLDLSNVEVNWDNSPINTTQDENQTEVETDDNSDETVNEAVTQADKPSSNLDTQNTEATDTNDETVQTDTDDVTTDEVANEQTDYQAFYEKLTKPFKANGREIQVQNADDMIALMQQGANYSKKMAQLKPNLALMRTLEQHGLNDADKIAYLVDLYNKQPEAIAKLVKEADIDLYSFDTDQAEAYTPKTVVNEPSALEDTIAELYGNHETFKDVVTDITTLWDKESKAIVSDNPEILKVMAKQADEGIYQQIMSAIDYEKMLGRLSGVPFLQAYEQVEARILQANQPTPKQEQGFTAPRPQANQEQVSSQNQAQKQRASVPKGSASQSNAGFDPLKLSDEEFLKFYNQQKFH*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0075	shell	direct	high	1103	0.999	GCA_009378535.1_00964
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	344052	345215	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	49850	51013	GCA_009378535_1_6_330	GCA_009378535_1_6_330	+	422915	.	PFAM:PF13252.5	Major-Capsid-Protein	MTIIYNNGTNPTSVGATQLNPHVFERKALLDALEESYFGQLADSRTMPKNSGTVIKQYRYFPVIDDRNSNEMGLDAKGAKYAHGNLYGSTNDAGLIADKFPVLGELGGRKNRIGMTRKEIQSNLQKFGVFYEYSNDAVNFDSDAKLLEHLERETTNACMTVYEDKLQLDLLTNAGLVKYAGTATQNSELSHGMELNYADLVKLGIDLDKNRCPKQTKIITGTQLTDTRTIPDCRVAYVGSELIPTLEAMVDYHNKPAFIPAHQYAAGTTLLKGEVGRIAGFRIVVVPRMMKWAGVGANATNAAYYKTGSKYDVFPFLVVGDEAFTTIGFQSGGGKGKFQTIHKKPGEATASSADPYGETGFASKKWWYGFMPQYVERLALLKVVAKM*	hallmark_hmm	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0076	shell	direct	high	1163	0.999	GCA_009378535.1_00965
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	345293	345811	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	51091	51609	GCA_009378535_1_6_331	GCA_009378535_1_6_331	+	422915	.	.	hypothetical protein	MTTENQTNKSQLEQLKEQADDLGLTYANKVTIKALKQMIAEELLKDTDADNSEQIQAVEDENLKLVHVIVTSMNSQKASIGFETFQVGNSVIGSIKRVVPLGKPWLVENIILKAIKDKQFQQFIERDDPNNRNNKIVESRLVPAFAIQELPLPTPKEIEELAKRQETREVID*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0077	shell	direct	high	518	0.998	GCA_009378535.1_00966
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	345838	349179	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	51636	54977	GCA_009378535_1_6_332	GCA_009378535_1_6_332	+	422915	.	.	hypothetical protein	MTVNIPNSQAMPDFNINELTHGTLDGTGVFDVLMDAVKAHLHEEFQAERIRATDYANAYIRSMEVVLQTSSQYALSKAKLGAELELMAKEIQKVDTAIKTSQYQDLLIQAQTKQVLQETDSIKAKLPIEIALMDKQVEKTDADISLANKEIEVAAERIKLTREEVAARVAQTELMRYELTHIKPQELKIQQAEIAIKEKQIPIMEKEVEFKANQIELGRAEITLKQKQIPLMEKEITLKQNQVDIGIKELQLKEKQLPLMEKELAYKDSQIALSQAEVALKHKQIPIMEKDIEVKNNQIAIGLAEIKLKEKQLPLMDKEIELKQNQVNIGVKEIQLKEKQLPLMEQEVNLKREQVNISKEEVLIKKAQLPMVEKELLLKDEQVKATKVETSLKQAQLPVIQKELAIKDAQIAGIQADTGLKQAQVAINQEDVKLKQAQLPLAQAQTEQVKEQTKQVTAQTKTINDKLPKELLLMDAQTTVTLNQAEHETVRRLLTTQQAATQTEQTKLVTAQVSNITAKTPKEVLMLDSQISQANAQTKSINDKLPKEISLLVSQDLQVKEQTKQITAQTKVINDKLAKELAMLDAQTVQVNKQSEQISAKLPKEVLILDSQKAMIDAQRLGQLEQTKLTTAQASNITTKLPKELLLLDAQTLQTNKQTDQLTQKLPKELLLLTAQEAQIKGQTAQVTSQTAQIMAQTNAITAKTPKEIQVLDSQIGQTNAQTSAITSKLPKEIALLTSQDLQVKEQTKQIAQHILVEQTQQELTGANVALVSAQASAISSKLSHEIALMEKDLVIKDNQVLQLETDTSLKAAQIPLMTEELNIKQVQLQIAQSEQEIKQAQLPLTQAQTSQVIAQTDLIGSQAITEGKQSALVEANKLMVDAQRNTLNSKTPKELLALDAQVAQTKAQTSAITANVNPDLELKASQKQLTLNQAQHEVAKSALTAKQASVVEAQIQLNQAQVKLQSAQADLTKYELQNIKPQELQLAQQKVNVAREEVKVKAKELERIPAEIAQITAQKELYTQKVITEKAQTDGQYIKANSVMDKNNKVLTAQAKSFDNDSKLKMANIMADVWKVHHTNAADQAVPNDVNKLNASNIGRVIETAITGVTSS*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0078	cloud	direct	high	3341	1.0	GCA_009378535.1_00967
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	349259	351928	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	55057	57726	GCA_009378535_1_6_333	GCA_009378535_1_6_333	+	422915	.	.	hypothetical protein	MSLFKKKKTFTNTDSASLYDPSQISDAKQVKKQAVKQWIFEGSQRPLHEYLLASSQNGLKNRWDRLYELVQTKNIYSEYRWDYGSNNPMGKPLPQLNWKKSAEVYLREKFPNQIDKFLHIDHGDLWELPSVDAWARKRFRFRQVNKTDHNHEVLIQSNPRYVVVLVGNDYNPQSWYLGSSSYVNKPNYHYLHPKNRSSRSHNYSRAYRTKAETNPRQIRELASYPRVKPLSRESYTFVKFLKEDYDKIMREAVTSQDTMPTAELIGIDAKSLLPNISNNYVPTPYPDDERDTKPYEWFGAEYIDKQGNVQTYYEHIPDLREHLIGVHASVDIIDIPIGQYPPIPIRISDHDMDKDSELLAGSSLLGKLFLNKQRRTEQLKQSHERIAYDRAYAAEALAVLGYDIKELISSFRDSVGADWGKLDDVWIHLSVPLPYDKSDFDVPVIHKYWHLYNYMMFKFRIATYFNSDYYANYRPFTYMYSLPTEYDGIDDTVFWRQQGNPFTFQSNRFKVMTYNREHIDDFRSNFIRYNSPVNEYELEHNTEKMAQRIDSSNGSTFDIPNELLDIRINHQTNGSYTDPYNFWFVPYNLYPYNRIPKTTRTPIGKSVGLIASTLYGNRAVGFENTSAYHSLPVIPYLLKQLTRHEQDELLQYAMQLHIRTEETVKVYRGWVKPFVKFGAVIVGIAVAIATAGGDGGSTYAALVALAKSLAVSLAINFVVKIAVKIGLISPKLAGYLQLIITVVMAAHGASWDFSKLITAPNIMTAVNQSFNAYNKQKVFEIAETHKQIQDETVKYQTKMEELQAKQQMVDLGVAKDAKLYLNMPSYAPKVNLFETPQMMYARHSNINVVNLSLGTVSNLADGLLSKQQTPNLTTVADIQQEVEDVLLIT*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0079	shell	direct	high	2669	1.0	GCA_009378535.1_00968
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	351952	352719	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	57750	58517	GCA_009378535_1_6_334	GCA_009378535_1_6_334	+	422915	.	.	hypothetical protein	MVDYTIPSIANLPTVRRRVGTDFAPLPELTPTVEVPTVNPVANTVGAVLDPTHLWAGSQAYQYGQDTSKVPDFNLPNTLGSILKGRNLVYDPTPMPTMTLPADTVVSQPKFRVDTSNQRYANYNDLGLPSPQQQWKNAASSVGSLIQSSLSNNTRGFRNSWGQMSANEKFNTGLKAVGSILEAINARKAHKLAKQTLAHDMMNNNRNYEMQAKAWNNTLEERQRYRNAYWEANNQGTGIARPESIGEYLNRYGAK*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0080	cloud	direct	high	767	0.999	GCA_009378535.1_00969
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	352719	354674	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	58517	60472	GCA_009378535_1_6_335	GCA_009378535_1_6_335	+	422915	.	.	hypothetical protein	MSNFDTVFSTAPKWTNVEAIDATDVINSAYKNAELQNKAFKQLTEAGADVFKYAQQHKLNEVEQEINAMNLDQFQTTDKAALIDNLITKYGTDIGGFDAANINSINKYVDGRNTTLIKDAADAIDLSSKSRKNTTEAMKYDADNTADVIHNLSNTAGLLPDGHPDKDKIYQKIESLTEQYMTKYPSGSTFLNRSLQSISDANKKAKTESIRLDNAHVDEAVKLYGSAYTSYLTQSSAIKAKEAEANKLEDPEARKKALDDIAFDKAALTAHYGSELIESLKNPLILARLEQNAYNDFHAKRMNEVEYQAAISAIKNAKKELEIKEAKVNNDYKLGEQENAINYTKATSGGDGSGGSSKEVKARKENNVNRLTSVGLTEEQALGFIGENGEFNPNKVLASTLAYANKLHTQHSNSHIQGSKISASEWFTKEAPALAKNAGVSDTRLRDYFDLARKHGKTDAEKIRIVEAGIAGRLDIAYQGNGFGIIDMFGVARNNSLNQMEETLLNKNVLHNIRTEIANEAFYGAAKDFSLYLQAINTAYPTGLKGFVRDNAVTLNQNKAFKQYADANTIKLLDEALEASKEKVDNPFYVPNNPSPQQKQQSKSNDKGKNQSKTPTSTALTPTAKTPVGWERSVENGKESLDKALRYFNIR*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0081	shell	direct	high	1955	0.999	GCA_009378535.1_00970
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	354735	355040	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	60533	60838	GCA_009378535_1_6_336	GCA_009378535_1_6_336	-	422915	.	.	hypothetical protein	MDKKPEKITIKIKKEDLGDLDEITIEVQQKESAVDKVLNQLIEGAQSLHHKAKVKGWYRRIKLISILLLLFYIALIAALFMGLFDKPAETLQESAYQQSNY*	.	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0082	shell	direct	high	305	0.997	GCA_009378535.1_00971
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	355199	355525	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	60997	61323	GCA_009378535_1_6_337	GCA_009378535_1_6_337	-	422915	.	PFAM:PF03374.13	transcriptional-regulator	MNITKIDTLISSFSDAIAMLSELKDELTEPKPVILQEPSASTTEVYLRTEVLYPWVKLKRWCTQNHVQPVKKDHYGLMINHYPASAWLEVFGVDIQEVLYKKSFDEAS*	phrogs_hmm	hypothetical_protein	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0083	shell	direct	high	326	0.997	GCA_009378535.1_00972
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	355659	370103	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	61457	75901	GCA_009378535_1_6_338	GCA_009378535_1_6_338	+	422915	.	PDB:3Q23_A	Virion-RNA-polymerase	MSTDLDKVLQKLQAAQSRNIAQVEQAQKRMGIETHSERQKRLTDEEAARLASENSFYKQAATNNTITPEIAPVYSPKVIARHNGGNILTDTGWGVASGVNSVAQGGLAIADTLLTQHVVNPANNVYSMITGDSKPLIPMPESEQKIAGRVVNAGIYQATLKKLGIYDAKAIEEYIAKKYSNEYYRQKAEVDEAVKDIENPLLKFAATFGHSLTKPNLLASGAGSSLPQALPAGAIGRAAKVANAALSASTRAGIGTAVTSTVVEMGDTAKDKGYSTPRDMAYDLATGAGLGLVNKGLPSSFSAEQVIANGGVSRILANSANRARTTAVNTATETGQEAVQGALESALNQHQKTGKIDVGKVAEDAGLEAAVGSAMAGGPAVVGNIKAAVGDVNGFRSTLKTDPNNKNYNPTYAYQVSAGKAALGEIDIDSAKAEQTQALTTAMGRLTEFDEKLAQLPDGKEKEKLQKQRNDWFNNQVQPLQDTVAALEQVGNLQLSQEMSSDEVLQRILDLNAEAYHNRKQQADQQLTDAVNYQPEIPEYTNVDGVGTGTTNTQQVSTGVIAIGDSIANAFGNQYKKSGVTSYSKDGRNPNEVLNTITKLSKSELQGKTVVLSTGLSNNTKADLNTIRKQIKHLKDNGASVQVMGVANNFKDDINLGTRMNTDLANIAKEMGVTFLGGFDYAKADKYKAHPDSGWYKPIYDKVGTTQVQGQAVSGTSQYSANFSIDNSNKGRDDLIMGTYTAFRKAGFTDGQARYLIGEVNRENGFSAKTMFGSHSDHANGAKNFGFISWQQGRRTNLFKFLKDRGIDVKESGIPQTQASLDAMAAFFMQEMKSGGITLSQYRGGTYDTRNFLKQANPDLKDRRWGHAAIGWAYGQNKLKSGASFDSSTHEAKLDKGHADINRLLGSNYTGSFSSQSSNSDINVDDNRTAQERLESLITKLKDEKSKTKEAEAQKALQDKISSLEAQVANNQNNSQQEQVSEESEVTSKAQQDTFDEIIRYSEMLSDDMINILVEQGALSEKHAEKLRLLNEVRVVENATKNADNVKHDIYIGKKAKRAEDGYIGLQSYQQGLVQYLKTDDIGVLDSYYNHLSRFNESHTSKAIAAKQAMDSFDEMQQPLYIARKADSQEWEVHEGSISKELRAKTGAIEISNISRNFVNNLIEEAFHLNQIKQGYDKAYELHGASDHIKESVKVSDFGLIDFSQINTGVSQQQQQPVQVTRASNTNQTSVADVTTSDPTIEPTTTPTQESIPVTPPVTETPSSVPTQRKPLRLPTNPYNDTLARDSSVGEYQRKIQEGVATSNYVWLGRGERQVNDEGKMATVSLSSIYRGTGSAKDPKTGQVTVRSNVFIDENKEVIKAGIFGSPIQSPIYVNSTNAHDQQKLKLIEEFGGDMYSIVHDGTQAGKDAAMIESANRYMDFMRVAVSNNQDFSRALLQMAANPNTGFVVQHKMSNSAFSEAAIVPRVVEELRKHPALQKVSYKEQPQAVFNVLSNMGTLMADGQFHSEIQRPIDTNTFGKEDNLYKPHVFSKDDLNKFNEYTATNSTSNTSTGLNSGNAGNNTPPNIAENNGITETGFNNSNNPTIETGIDENTDTGFDLSAFESDQNNTTEATKTLPTDISTNTEKNSTQETESSVDELITPQETIPVKRNSSIPTNRASNAITKETTLKPMQVRKLESTSKAKEETKAEDTVYITNTPIEKSFINKPVKVSDLASSIESSQIKTKDKSQAENQALISVLSRYSPDIKVEIQDKTSYDEKASYDDDTIRVSEDSKDITRDIAQAMVHKQIGNIADELDTLDHVTALANIETKKQRDADRKEGKQNTGVLFDDEIINRQAKLGELRLRVDEINKDVRKRMRKILSDPNQKFTENSKALLMRATDSAADLLQLGLFNEDVKSVLKQVKVSRGKNKVTKAYHALMDAVTNFFGFSKDESTAYTKLLDIVSDSTSLSVLDSEGNFSKSSEAKIRQLNEPAKNIEEEQKKPITATKDSKVVRNILKTSFRQAQTLHKPLSSIQNFVRELYTNPVKASQILNLEPPTKAQREQINDFAEFTAEFREHLKEVFKPTDEGYENRALANYFYDKQTGEFDSNVLDALSYGAYDYLNSVAKHTMNMRDDILALLGLTSNEAEQKNNAYITKEMWETYKYIGSGYVKVADDLGKRVAETLNIQRTENGSVTVDSRLYSALGTWALSAMQSADLIHLHSISSEKHKKAIEEVSGVIDEKEFNSHGTVRFVSITNKEGEGINKRINEISEANKGTAGYLTDIMGGVSAVRMPSLKPIEESVANVKRRIKRTDATVTDLQAERVAKAQAHANVINEPTFSLLTNLASQHEDAFLEMIGAKLKEGELQTAHINDRDGLEGKSEAVMRDWTNAVDFINSISKVDGVRKYWDTMFMAVNSRMHYNSNVFNYQSSKLHRAMAEPSNFKVTVQLKNKDGSSVLDSLQSKLKEHGKEIHSKHLTKDELNLTYFLRALAENMEGSEDFIEAYFESTGSKEIFTEGFTVDKLPSYVFIPAFIEYLNQEHIQKATEIVSKAQAGDKISAEEMNHLSSVIDEMAMNGSSLRALREWADFQTAQENNHANFTTSLGLGSDGLNNGAALAHFWNGAFYKELLLRTGFFSFNDPFKSYFDARHDKNLGDYYTAFKNAVINEKAQEAFIMGFHANLEKDLANHNEQVFRALMKVQKSLTKRAVAKSVLIPFNYGAGVSSLKRAVFRTFLKEMQDNITLAAQQDIANKKALEAGQMTQLEYDTQRAKLLNQVMTVDRLFSFMTQKPIQWDITIDNEPKAVVINENLDLKYMLEAWISPKDEAMLENKYSFTMGQYLAEVLQNYETVYIEKNKVNMRMLSSTVELFTQMYREVEDRAIQTVAERISNALVESGLDRGIANELALKEISYRGLSDKEREELVHSVMDKVQAQIHNVYSVQNGESKAKVRLTRLAEILFVDKANLTNNSFFLVNKSGKYQATSFGSPARHIHLEDKALLANSVQTQSMDSYISSFAMAMGKKININVHDANIGAIDNQLDMITQQNKATFQALVSYHGQLESLRALTSVIQSSYALIKDGVIRKDFHVNENFAELTKGLTSLINEVKDTELNKLDQLANLAYLHQYAGEFGEYQVTDADRQTALKEKSKVVDQINQLKKDLDFNTTIKVTGNEPNKRTDTTKQQTSESGIVQLSDSRATEQVSQLPTTSTGADGTQGTAFTNSSSTPTEPTIQNLKQLDQTIKGLVNVSEVQLKLNKMLMGKANQHLSKMSVKFADVTTPNGTRAYGSYNVTTHTLTLDNQTFSQSGNDENKLRVINHELVHALTEYAIISNAQDLRSELNHLKKMLDAVMAKWQEDVAFNKKYGHSRHDTKEDDLTRVNQIMEVIKASQEADTTNGNPYAGLSEFIAYGMTDPEMMRYIDYAIELADLGIKPRKGISSVMDFLVRLASKVLGFKGDGYKAFVQNVETIMDNPPVDLLTLTSNSTRFSASAMKSVQANIKRGMEAMNKTITSKADVKRAMYRNDIGWIDFVWGSTGILKANGKTKGAMGISHIIEARMRKDGMSYDEVVEMLTQNIVDTIAQGSTTAAYTSSNGVNNIKITHKGYFAALRKAKGSNAWVITAFEIFEDGTGKGDGKTSPTHNQSYSARTDVGASNETNITQLTTDSNEDTRYSQIFDETDKQSVSEVFNSLDSQTLTDGWNKHLQEVWDSLFDGNIAYSTLSEMEQKSLLDTAKQVNKVFVPHTFNMTVKEQLSYQAVTSIVDFLVNNHTNSNITSELNKIHAQLIKAYPTAADLYPDYHTVNDEVKNLYDTEHSKLFKSVGEMNNLASVVALVLSSQTFNELTNQKVELRKTKHDSWFDKFMNLWHKAMNLLRTKYINANSTSEATKQLMAKLVNAETNARLARVSMIDKAWNTVYQKPMDAANWVWDKTWDIGSEAIISGLPMSSQMRDTWRSHKERIKAAKQSENLSESSVAKDSMNLTIEAGLAITGLDMNMSYGGNQDIKSATRGFIKETVNEMLGQRGVGHTVERVIRTVNKVAQDRANYKQSMLNNFASIMKDPKRFDNHAKQSITRTVMMSDAQTLLHYHGMEQTLNYIANSKQRKVRIKELEDKLQSLSKNREHFNQLLKDTKDLAWYMVGETVSGDVKKNAELIATSAGTRSITPYEQMDQNIFETVDELVTLHGLEMVNGRYMYTTQDLIQNEGQVLIAMLNTHHDLVKKSKEEFKDNPLNYIKGFKPAIHNPHVDVVAVKAEEVDDYIQKGYEQVLHGSIVQDELDNTEPRYLMINKNAPYARYNSGGLDMKDTHFRGYEVFNYKTNAKELAHVGQGRLNRNTELAKTMDAHNYDPRNIKGNHLIPRYGNDMLILGYNYEMSGELRDKLLDRDLSFDMMLATMGSELVAKPKLVDTQRTLAQVLAEDAKNPITGFKISPVHFTVINPNSPDPRVQEMLRMMPYEFYQEMQSQFGKGKPFVIRTAVFNSVFGFRKYNVSEMFDKVSGERNYFEKFMVTLYENIYGKQARNKAANHQYVWEWFVTQAKDLIVIRSVKVLIGNIIANALISSAYGITPTELARGMFYAWKEGKAYRQLQAEEQRIDFEMLNTTSESQRKKLKAELVAVRQNMQNSGMHEYMEEGLMSTIVEDIDMGSETKLFKSDFEKKLDNLAEKIPQPVRTTMKWATFHPDTEIHEFLSESTQFSDFAAKYVLAKHIERKALKMGKSKKAAFEDGIQMAQEVFINYDIPTNRTLQAANDLGLFMFTKFTVRFQRALARQLHQNGGHAMLQHFMVEEYLPVAGLLNPFFPMFNTGLGAFTGIGALAQLPLIAMFL*	common_virus_hmm	common_virus	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0084	shell	direct	high	14444	1.0	GCA_009378535.1_00973
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	CDS	370567	371757	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	76365	77555	GCA_009378535_1_6_339	GCA_009378535_1_6_339	+	422915	.	PRK12735	elongation factor Tu; Reviewed	MAKAKFERVKPHVNVGTIGHVDHGKTTLTAAIATVAAKHHGGEAKDYAAIDSAPEEKARGITINTSHIEYDTAARHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDGPMPQTREHILLSRQVGVPYIMVFMNKCDMVDDEELLELVEMEVRELLSDYDFPGDDTPIIKGSALEALNGSDGKYGEPAVLELLDTLDSYIPEPERDIDKSFLMPIEDVFSISGRGTVVTGRVESGIIKVGDEIEIIGIKPTTKTTCTGVEMFRKLLDEGRAGENCGILLRGTKREEVQRGQVLAKPGSITPHTKFDAEVYVLSKEEGGRHTPFLNGYRPQFYFRTTDVTGAITLQEGTEMVMPGDNVEMSVELIHPIAMDKGLRFAIREGGRTVGAGVVANVKD*	mmseqs_cdd	nonviral_gene	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_CDS_0085	shell	direct	high	1190	0.999	GCA_009378535.1_00974
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	tRNA	299745	299820	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	5543	5618	tRNA-Thr	tRNA-Thr	+	422915	.	tRNAscan-SE score: 79.7	Thr	NA	tRNAscan-SE	.	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	tRNA	299899	299982	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	5697	5780	tRNA-Tyr	tRNA-Tyr	+	422915	.	tRNAscan-SE score: 61.0	Tyr	NA	tRNAscan-SE	.	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	tRNA	300010	300083	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	5808	5881	tRNA-Gly	tRNA-Gly	+	422915	.	tRNAscan-SE score: 78.4	Gly	NA	tRNAscan-SE	.	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_tRNA_0003	.	.	.	.	.	.
GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote	cenote	tRNA	300096	300170	GCA_009378535.1	RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535.1_RCJP01000001.1	GCA_009378535.1|RCJP01000001.1	GCA_009378535_1_6	GCA_009378535_1_6@C19	5894	5968	tRNA-Thr	tRNA-Thr	+	422915	.	tRNAscan-SE score: 74.7	Thr	NA	tRNAscan-SE	.	C19	77555	294203	371758	GCA_009378535.1|RCJP01000001.1@region_294204_371758@tool_cenote_tRNA_0004	.	.	.	.	.	.