core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_009378595.1|RCJR01000021.1@region_1_1214@tool_cenote	cenote	CDS	2	1213	GCA_009378595.1	RCJR01000021.1	GCA_009378595.1|RCJR01000021.1	GCA_009378595.1_RCJR01000021.1	GCA_009378595.1|RCJR01000021.1	GCA_009378595_1_13	GCA_009378595_1_13	3	1214	GCA_009378595_1_13_1	GCA_009378595_1_13_1	-	1214	.	PFAM:PF05939.12	minor-tail-protein	SITDKPQSFTPSSHVHQASDIADLHTILSKYATKDEIPQINTDGLTIDTSNLATKTSVETLANKVTETSEALKSETKLRANSIAAIDSKIDDEIASLKRTKADLSHTHTMSEVTDLSAELERYALKTELNNISVDTSHLATKSSVNELSEQIATKADQSHRHTITEVSGLQGILNNKLNSNASAISARKLTTPRRINGIAFDGTQDITLPTPTANVSWSAISNKPTNFTPSSHRHAVSDITNLQRELDNKASRNHSHTWNSITNKPANFTPSAHTHQWSNISNVPSATINNAGIVQLSNNTNGVRQTIAATEFALNEVRKLINSSSRRGSITGVLNRQSHRYFYQRRHGTSSTDAVYSDIDTFTFPDGRIVYLVRLEGIKPAFFDVNTTSVGGSDHTPAKIINL	hallmark_hmm	common_virus	NaN	.	0	1214	GCA_009378595.1|RCJR01000021.1@region_1_1214@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	1	1437	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	2	1438	GCA_009378595_1_17_1	GCA_009378595_1_17_1	-	219331	.	PFAM:PF05939.12	minor-tail-protein	MMESPNYGDFFMIYVKDNYTLENEQTVILLEAYPETLFTNSSDEEAVLEYSHDGTKWNTLLTLAPKQKQTTAVTSRYIRQTTQTTVEAKAVGNHITPLVLAGNPLHSGADFSNYITKPQLDSVIAKVNDKTALLATQEQLQTATQTQTRALTAETQQRHSQIDTINQTITRNKQAQDELINQKANQTALAALEAKVTANTAKNQSQDTEIAKKANQASLTAETTARNQAIEAVKGTIANNKQTQDGIINQLRADMATKANQSALDTETANRTSDIAGLTQTVNTHKQQLDGQIRALEQNKVDKNTLNQQLNAKANQSDIDRINTTIDQKALKLNQVTAGNGLTGGGTLANSFQIVLGTPSTITQNSTNTTTATSHSHAIDRATTTQAGIVTLSHETSGTNKTKAASEFALGEVRRLMNNLSNPTRDQTPNLSLLTWSSITDKPQSFTPSSHVHQASDIADLHTILSKYATKDEIPQINT	phrogs_hmm	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	1452	1772	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	1453	1773	GCA_009378595_1_17_2	GCA_009378595_1_17_2	-	219331	.	PFAM:PF07659.10	phosphofructokinase	MTLEQTLEQRKNTHGNFKENSAISMGLKSMFRDHGNFYFMPRYQQEALDMIAHKISRLIAGDSYFIDTWRDIAGYAQLVVNELSDDPKATDVVQQYTKADQLKLPL*	phrogs_hmm	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0002	shell	direct	high	320	0.997	GCA_009378595.1_00955
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	1787	2005	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	1788	2006	GCA_009378595_1_17_3	GCA_009378595_1_17_3	-	219331	.	.	hypothetical protein	MNPQQQQRKQLRQLFETNTEGYIFLSQLKKISPSDLMIRDIAHYYDYVPVYRNKTSTKIIAYKHRTLSDDIF*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0003	shell	direct	high	218	0.995	GCA_009378595.1_00956
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	1980	2231	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	1981	2232	GCA_009378595_1_17_4	GCA_009378595_1_17_4	-	219331	.	.	hypothetical protein	MKYQIKPLNWVDESSIGMTHTYHYRPEHDRYRLTIVNRIKPNARNILMDFDSIDEIIDFANKHYVLNSHYFLEKVNEPTTTTA*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0004	shell	direct	high	251	0.996	GCA_009378595.1_00957
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	2231	2599	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	2232	2600	GCA_009378595_1_17_5	GCA_009378595_1_17_5	-	219331	.	.	hypothetical protein	MQLRSLKVPKKLNKRKSTRQKVFKGYLKIPIDTDCTTEELNAKSVRTGDWIYHSPKILKKGIKRHWYINLYLYNVVGEFTLIHYKTAKVDKTHFNAVIDEALNEASEHPLLDYSKSYMTVSC*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0005	shell	direct	moderate	348	0.943	GCA_009378595.1_00958
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	2553	3248	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	2554	3249	GCA_009378595_1_17_6	GCA_009378595_1_17_6	-	219331	.	TIGR02170	thymidylate synthase, flavin-dependent. Two forms of microbial thymidylate synthase are known: ThyA (2.1.1.45) and ThyX (2.1.1.148). This model describes ThyX, a homotetrameric flavoprotein. Both enzymes convert dUMP to dTMP. Under oxygen-limiting conditions, thyX can complement a thyA mutation. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism]	MTLSTAKVIAHTCPTKDIPAKTANEFIAYVARVSNPSNQDNTETSDKLINYLLNHKHFSPFEHYYVTLEIETPKDISIQLLRHRSFVFQEFSGRYQDINAMDNPFIIRETRLQDSKNRQNSLENTDKTLDFAWKFAQSELLRQAQELYKNALQQGIAKEVARSVLPIGLTKSRLYITGNVRSFIHYLTVRLDPTTQKEHRQLAIAIYDALLPYFNLDAIEELKGAKEAQQA*	mmseqs_cdd	common_virus	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0006	shell	direct	high	695	0.999	GCA_009378595.1_00959
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	3349	3747	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	3350	3748	GCA_009378595_1_17_7	GCA_009378595_1_17_7	+	219331	.	.	hypothetical protein	MFCVSRIGVAMPNSLTDISFLVKVFAVVVAAVFAMSLTEEIDKEGRLHLSLIVLIKFTFSAVFGFFAGSWLIEFYGWLHLSPISQGFIMMLASLFGMTVVGIIYQAVLLSTTNKTLPQIVTEIKETFKAIFK*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0007	shell	direct	moderate	368	0.922	GCA_009378595.1_00960
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	3756	4340	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	3757	4341	GCA_009378595_1_17_8	GCA_009378595_1_17_8	+	219331	.	CDD:pfam11860	N-acetylmuramidase	MSKLITEEQIKALAKQYDIDVACLKAVIEVESSGRGFLNGLPKILYEPHIMYRLLTQKRKITLRDKLTKEKPQLCYPKWGTYRYGLSSSQHGRLEQASKYERDTALESCSWGMGQVMGFHWKSLGYPSLQAFVNAMYKDEASQIDAMLRFIKTNKLITPLKQCQWSVFAKGYNGAGFAKNQYHIKLRKAFNKHK*	common_virus_hmm	common_virus	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0008	shell	direct	high	584	0.998	GCA_009378595.1_00961
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	4400	4855	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	4401	4856	GCA_009378595_1_17_9	GCA_009378595_1_17_9	-	219331	.	PFAM:PF12643.6	nucleotide-pyrophosphohydrolase	MNTNNPITAIIDWFKKAKPQPSIKNIFTQLGCHFEEISEMLDTIPECEVMASEMNDAAIDLKTLDIDVYGEQMENTISAIDKVELLDSLCDQIVTALGVGYDLGFDMEGALWEVIKSNYSKFDDDGNPIFDENMKISKSNNYFKPNLEKYI*	phrogs_hmm	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0009	shell	direct	high	455	0.998	GCA_009378595.1_00962
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	4842	5087	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	4843	5088	GCA_009378595_1_17_10	GCA_009378595_1_17_10	-	219331	.	.	hypothetical protein	MYHRKLEKYKEYEGMKNAVVGKGELIYVSTPLGDAYRAPCGALIYDRDEALEYAHKLDILIRKNTVLFTQRKLKGKAYEHK*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0010	shell	direct	high	245	0.996	GCA_009378595.1_00963
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	5157	5762	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	5158	5763	GCA_009378595_1_17_11	GCA_009378595_1_17_11	-	219331	.	COG4112	Predicted phosphoesterase, NUDIX family  [General function prediction only]. 	MIHDKPVLCTTKEALLELSIPTEGSHIIPIPLEKVQNLPLHFISQDIVDVDIIVGEHYPQIIPYVVLTTVNEFLTYYKSDNVGEQNRSIGFGVHITYDDQKGTLTQTLIQAVVKDLKQKLNYDTTDDLNFPEEVFVLVKNDHQTSRLHIGILLALEVKLDEVFLDESIAGIKWQTLDRLVLNIDEYQPWSQLIIKTFIDSD*	mmseqs_cdd	nonviral_gene	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0011	shell	direct	high	605	0.998	GCA_009378595.1_00964
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	5765	8272	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	5766	8273	GCA_009378595_1_17_12	GCA_009378595_1_17_12	-	219331	.	PDB:2KFZ_A	DNA-polymerase	MLSCDFHEKPDVAILIKGSYFDETKLNRYYVQPLSKLGVNQLMAIELVYPEKGKLSVAIARKNILKLLPALANHGIKYLYVADATYFKALTGQNKADTHLGYVLPCKLKDYEHMQVIFGINYGQLLYTLNASTKLDLTLQTLAEHYQGNYVTRGDIIKTALYPTNDEIDDVLIRLKQYPALACDIETTGLELGSELYSIAFAWSQHEGCAFKVTDKVQLKRFFESYSGVLIFHNATFDIKHIIYHCFMDNPRDFKGMIHGLHTMCRNIEDTKIIAYLATNNTQGNILGLKELSHEFVGNYAIDVKHVLNHPLATVLEYNLKDTLATYWVFNKYKPKMLSDNQDSIYKTIMLPSIKTIIQIELHGMPMNMDKVVVVKKQLQNQANDALEQIYASEHVKAVTHELQTKELEKINSKLKTKQHTLDKVKDLQFKPNSTAHLAILLYDYLGLPILDYTPNKQPAVGAGTIEKLIQHTQDDTIISLLTALLEYAKVQKILSTFIPAFEKAQQKDDWHYLHGSFNLGGTLSNRLSSSNPNLQQLPSGSTYGKTIKQCFQAPDDWLFVGADFNALEDRINTLLTKDPNKQKIWIDGYDAHCFRAYYYFANQMPDIINTKESINSIKHKYPELRQESKAPSFALQYGGQYFTLMKNCGFSESKAKEIETNYHKMYEVSDAWTQRKLEQCAKQGYIDVAFGLRIRTPVVGKTVLNTSKTPYLASAEARSVGNAISGQSYCQLTNRAINEFMERVWASEYQYDIMPVCLIHDAIYLVIKNDVEIVKWVNDNLIECMQWQELPEIRHDQIKLEAELGIFYPDWSNEITLNNHSSTSDIITTCSNKD*	common_virus_hmm	common_virus	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0012	shell	direct	high	2507	1.0	GCA_009378595.1_00965
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	8265	8723	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	8266	8724	GCA_009378595_1_17_13	GCA_009378595_1_17_13	-	219331	.	.	hypothetical protein	MANTRDRVHLGIKIVREILNPLLKQKNDILTQLLDAHFESTGSRIAIYKGEIIAHNTQSKDPPKLLHKSLAGYVDSLHETEDRYNSYFIQMSRYITQQTHTHPNETVFHFFPVEVFQEYVGRPPDVKRTDEHIPEFLKEIIAEMKLLRSLYA*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0013	shell	direct	high	458	0.998	GCA_009378595.1_00966
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	8723	9979	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	8724	9980	GCA_009378595_1_17_14	GCA_009378595_1_17_14	-	219331	.	PDB:3UPU_B	ATP-dependent-DNA-helicase	MSIVLNNEQELAKNELLEFILTPSELKQDSIIVLSGAAGTGKTTLLKSVIDNYKAIKELNKIINMPTTQIRWEFTTMTHKAARVLSQVIKLPVNTLHHELRIRPLKHGYYFCGYDLYLEPSMDKKIIVVDEASYIDSEVLNYICELVSKEPKLQFILIGDPYQLPPVGMDHAPVFNAGFKTVHLEQSVRQSNAPHLAQTVNTLRQAATQGKLHTIKADNKEVLYLDKKTWDKQIISTLNQGIFAKVIQYTNHQVQASNKKINRQLTGNREIEVGDTMVICRKLLDGCIVPLDSEVTVVSIYRYHPNGTSELQLPYYDLRLEDNSGTMHQRLVIQDYKAYTELAAQYKTPRSGPPYIWHLIHAYACTVHKSQGSTYDEVFINLNSYRSVYKNNPAMALKLLYVAVSRARNKVYFTGDIG*	common_virus_hmm	common_virus	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0014	shell	direct	high	1256	0.999	GCA_009378595.1_00967
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	9963	11138	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	9964	11139	GCA_009378595_1_17_15	GCA_009378595_1_17_15	-	219331	.	COG3864	Predicted metal-dependent peptidase [General function prediction only]. 	MNLQKLEKELSRVKIMLMGKPSAVFLAYAILHIPTVFSNKVATAATNGLRIEINPKFFQNLNQEERQFLLAHEVLHILLSHMTRLGTRDQKKFNIAADYVINTTLVYQGFTMINGGFYDKQYLNWSAEQVYNDLSDDTISNLSSNTSNHSEAGFGDSDIPSKLSTQDIIYADPNEAEKVAQTTQEIAIQASLQASMQGASSTVPHCVQRLLDELTKPKVNWKTVLRKYVFDLAKTDYSWRKPNRRLLTHGYYLPSLGGNCLSKISFAIDTSGSVSPRQFNEFLSEVAAVFKLLKPRELDILQFDHELQDHTTVKSLPQFTTLKFKGCGGTCPEVAVEAFMKTNSKALFVITDGYFRNEDAIPKPRQPVIWVIFDNPSFKAPFGSVIHVNST*	mmseqs_cdd	nonviral_gene	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0015	shell	direct	high	1175	0.999	GCA_009378595.1_00968
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	11148	12155	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	11149	12156	GCA_009378595_1_17_16	GCA_009378595_1_17_16	-	219331	.	COG0714	MoxR-like ATPase [General function prediction only]. 	MNITLKQAEKLMYPLLNNKIVPFLHSSPALGKSSLAKTVAAKAKLKVIDLRLTELDASDLNGLPYFNEGKAQYLPFNTFPIQDTEVPDGYNGWLLLLDELNSALPSVQSAAYKLILDRQVGQYKLHDDVYIIACGNLDTDNAITYPLSSALVSRFAHFYIEPNTKEWTDWALDNDIDIRIISFLGFMPSHLYKFNPDSTEPYASPRTWEMLSKALSELETIDTTHLPLLASLIGDGIAQEFMQYLKLADKVPKLEDIINNPEKVAVPSELGLQWATTSMVISSIDNSNYAKLEIYLRRFNMEMQVVALRYIVKQYPNLVTKTSEWRKALASEIFI*	mmseqs_cdd	common_virus	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0016	shell	direct	high	1007	0.999	GCA_009378595.1_00969
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	12191	12475	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	12192	12476	GCA_009378595_1_17_17	GCA_009378595_1_17_17	-	219331	.	.	hypothetical protein	MTCTLIHKYELLYKLEYTPIHPRYELDTEFDSIDGKLTFSISTDDTHDVAVRLIFKFDIDADNMLHIYTTGLNESLLNEFLTYLAICGIYYKLQ*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0017	shell	direct	high	284	0.996	GCA_009378595.1_00970
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	12491	12871	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	12492	12872	GCA_009378595_1_17_18	GCA_009378595_1_17_18	-	219331	.	.	hypothetical protein	MGLDTYLYAIAEDKDNRDEEGRRRFEKDLETIAYWRKCYPLCDYFLSMKSDLLDEDGNYEYIPITQGELSEFLDISLDDYFNNSVLGVDEEDEYSKMYDGDIETLRQAIDHMKQLPNHNFYLLNLW*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0018	shell	direct	high	380	0.997	GCA_009378595.1_00971
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	12881	13114	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	12882	13115	GCA_009378595_1_17_19	GCA_009378595_1_17_19	-	219331	.	.	hypothetical protein	MKLNTHDINWIVNEYQAGRTTQEIATDTGMSRQNVKRALAEAGLLTLSWYKTKEENKMLIALASKGISNVTQLLERL*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0019	shell	direct	high	233	0.996	GCA_009378595.1_00972
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	13127	13300	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	13128	13301	GCA_009378595_1_17_20	GCA_009378595_1_17_20	-	219331	.	.	hypothetical protein	MNTTTFLKSLPKGRITIFPSKDPKYWLCEHIVEELLTTFYFDMDTQKWVFLSATKLN*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0020	.	unmatched_CDS	none	0	0	.
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	13544	14752	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	13545	14753	GCA_009378595_1_17_21	GCA_009378595_1_17_21	-	219331	.	PDB:1MSW_D	DNA-directed-RNA-polymerase	MKVFNPMQYLAIDIANHFGLDKLNYEERIDWVKTNINSLENMTEQAEEPILFAKAVHALRQTQQGIPTGHTVAFDATCSGLQLMSLLTNCKSGMSLTGLIDPNKRSDAYTQITEYINYLLKQDGIDSVEVSRKDAKQAIMTSLYGSKAKPKELFGKQLLPYFYKAMDECCTGAMDLLSWLLNSWQDIQVQSWVLPDGHTAYIPTMQQVTKRVSINELNYTPVVTYYENIASEKGIANAANVVHSVDALVLRELVRRCNYHKGELKTFLRLHTNAEQTKQVDDTLWINERFKATGFASISFIEVIEYNNITKVSNELREALANICEHILSHPKFEVITIHDSFACSPVNMQRLREHYNNILVELYESHTLDDLLSQVYQTEITVNVGEKTLSETIRNSNYGIN*	common_virus_hmm	common_virus	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0021	shell	direct	high	1208	0.999	GCA_009378595.1_00973
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	14739	15023	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	14740	15024	GCA_009378595_1_17_22	GCA_009378595_1_17_22	-	219331	.	.	hypothetical protein	MLNNQIRYLSILVENLTEEEKSLLCRRAVTLSWSNPEAIKSFCYVTRSNNIYPFCSATNEKIEGEYVCSSYQEFNELINLWKLDRLLGINHESI*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0022	shell	direct	high	284	0.996	GCA_009378595.1_00974
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	15013	15273	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	15014	15274	GCA_009378595_1_17_23	GCA_009378595_1_17_23	-	219331	.	.	hypothetical protein	MRLHRDPISIATNTLTKEEKEILAELLQIDIPNNTKAIVYYFNLDSAQCFNLEVFARLYDLIDSLDEFIDMVIENKMNLVVGLYAE*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0023	shell	direct	high	260	0.996	GCA_009378595.1_00975
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	15275	15535	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	15276	15536	GCA_009378595_1_17_24	GCA_009378595_1_17_24	-	219331	.	.	hypothetical protein	MSNYYYYAIVTDKLSKKDYQHINNSFTIYVNQPNPTYFIYGLETKRAYLVSYSFSLDDDLTIKFFPNLKALIEGIYTYRLDKLIGI*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0024	shell	direct	high	260	0.996	GCA_009378595.1_00976
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	15528	15791	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	15529	15792	GCA_009378595_1_17_25	GCA_009378595_1_17_25	-	219331	.	.	hypothetical protein	MNDKLYSVIKSTDLNQEHLEILKSDKKISPYVQNDDYIIYCKTRDYFFLFNLTPSVRILSDIYTDSNQFMERVAQYQLNRTLGLTDE*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0025	shell	direct	high	263	0.996	GCA_009378595.1_00977
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	15784	16050	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	15785	16051	GCA_009378595_1_17_26	GCA_009378595_1_17_26	-	219331	.	.	hypothetical protein	MEQNFRYIWLSLNDITDSEIDHLIELIGFYENNSKYIVYYPSMDFFLWQKEVPDLSKDKRDLVTNSFTEFMAIVNEYVLNQILGIDYE*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0026	shell	direct	high	266	0.996	GCA_009378595.1_00978
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	16161	16421	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	16162	16422	GCA_009378595_1_17_27	GCA_009378595_1_17_27	-	219331	.	.	hypothetical protein	MTIIKATLYSYYEKESITFYFYTRKSKIKVSKLVDEISKHLPISADFSKEQYYSKTIKLEELFYANLENDEGQFLLTFDLINPTTI*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0027	shell	direct	high	260	0.996	GCA_009378595.1_00979
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	16436	16711	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	16437	16712	GCA_009378595_1_17_28	GCA_009378595_1_17_28	-	219331	.	PFAM:PF14216.5	ribonucleotide-reductase-NrdA-like	MKTKVVNKYKEPYDVYIGRGSKWGNPYPITANQDRKTVIQAYKKYLLNSPELLKDLHELKGKTLGCFCKPKPCHGDVLIELINQLDKPKSD*	phrogs_hmm	common_virus	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0028	shell	direct	high	275	0.996	GCA_009378595.1_00980
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	16730	16912	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	16731	16913	GCA_009378595_1_17_29	GCA_009378595_1_17_29	-	219331	.	.	hypothetical protein	MIYTFDRYKNVSVNASIIMLASSENESYSVGCLINDETIEQALNRLGIDFDTRYPDYIIQ*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0029	shell	direct	high	182	0.995	GCA_009378595.1_00981
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	16909	17826	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	16910	17827	GCA_009378595_1_17_30	GCA_009378595_1_17_30	-	219331	.	PDB:1MSW_D	DNA-directed-RNA-polymerase	MNQRQLEILMHPKHIRRDVSEIIIKSFSKQIEQSVKAIHKWTEVSEYESKNARKQVLSTLDIHKLVVDIFTTITMVTQKPLPYISVASQIAIDNMSKLDSIKTACELIALLQHTKLYVINKNYDTRLIESLVVLPKDAEITKRIRLSCFLPPMIEPPKPVNNNRQSGYLTINDHIVLGYKENQHNQRLSLDVINTLNQNKYVLDNYVMQNFEKPWFKEVLEECELSLLDTIDQQKYYDQTVTFEKYKEQLKVLTEIIKDKPIYFNHRYDKRGRIYTVGYHFNTQGTSYEKACINLCKQELITGEL*	common_virus_hmm	common_virus	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0030	shell	direct	high	917	0.999	GCA_009378595.1_00982
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	17893	18018	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	17894	18019	GCA_009378595_1_17_31	GCA_009378595_1_17_31	-	219331	.	.	hypothetical protein	MKAYLIFVTLGFSTTVWADNAVEACKQVSQQGYSVTSCHPL*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0031	shell	direct	high	125	0.992	GCA_009378595.1_00983
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	18087	18326	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	18088	18327	GCA_009378595_1_17_32	GCA_009378595_1_17_32	-	219331	.	.	hypothetical protein	MTEFTTRTNATPADREPADHYVNVYFQDRQIGYLVLDKFVQLVEFLQKDEQNATKLIKNCTATYRERGKSTVSFDLSSL*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0032	shell	direct	high	239	0.996	GCA_009378595.1_00984
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	18874	19143	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	18875	19144	GCA_009378595_1_17_33	GCA_009378595_1_17_33	-	219331	.	.	hypothetical protein	MQAVQVQLHNLVVECSSGMYLLVRDGHIDIADAVESLLESAKLYLAYPPRFIESEYYYSVVPLSTIHQIHLESDCGDFTISFNPIEILD*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0033	shell	direct	high	269	0.996	GCA_009378595.1_00985
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	19244	19549	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	19245	19550	GCA_009378595_1_17_34	GCA_009378595_1_17_34	-	219331	.	.	hypothetical protein	MLRVSNVARNQLELNMEQQVRKEKVQRTWLGNVFHAISKAFSTAGTLATATDKAAKNYGALAVTQSSRAVKKLDADIRKEYGVSLAEFNKEVEDMVDDLYD*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0034	shell	direct	moderate	261	0.853	GCA_009378595.1_00986
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	19774	20160	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	19775	20161	GCA_009378595_1_17_35	GCA_009378595_1_17_35	+	219331	.	.	hypothetical protein	MFMFNKLFMFTAGLALAISSHADVYLGSYQGYEYYLLPSKTKQVTGTKYEVQMERFVAQDKKVDGLAQGSYTLYRRYIECSNKTVATISWANYNKHNRLLDSKKMSHLKYYDIFPRSWGSALYDEICR*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0035	shell	direct	moderate	380	0.982	GCA_009378595.1_00987
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	20160	21233	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	20161	21234	GCA_009378595_1_17_36	GCA_009378595_1_17_36	+	219331	.	PF18741.1	REase_MTES_1575	MYDRFNNWQQWKYYYHEQLKHPAGFEEMFVDRVLSQVTGLTPSDVIPQYHFVDDVGGNRYIDFMVLNEAKGYHLAIELDGLTKIQSGYNTLDYVRYQDMWVRQNALMRTGAVLLRFTNKDMFQRVNWVIQSVVDTLASQNKQYTTQQGLIQGYQTRIQALKNQATVTQQMKDTVAMLQEQVTQLQVKQSNESTKELNTQEWVMKPIPSVSEIQDEYAREEQKRLAAINNANTTVTTKQGNSYRWVWVILVVVIAIFGYLALRDDYVTAEEYIPPTPTATTHEPRIAYTPVENEVLPITQEPVTAVQPEHKIAMIDIPTHGRSDHIENIERMDKEGYSERGTLTQIPNETRADRDRGY*	hhsuite_tools	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0036	shell	direct	high	1073	0.999	GCA_009378595.1_00988
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	21233	21694	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	21234	21695	GCA_009378595_1_17_37	GCA_009378595_1_17_37	+	219331	.	.	hypothetical protein	MTDKNKASVLTEISHVISSAAESMNKSVQDWADKSKQKRLERTFSDINEAIRFLIDGKSPDEVENSFKNHAYLDNKVQYNYLKAGRWLNGYPVYVDKKQWVKFGYDYNGRHWGIEITDGLMIFVRDANNCKENYHSYADQVSQLDKMFDSIYN*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0037	shell	direct	high	461	0.998	GCA_009378595.1_00989
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	21852	22538	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	21853	22539	GCA_009378595_1_17_38	GCA_009378595_1_17_38	+	219331	.	.	hypothetical protein	MTLTVDVLKKSLPSKYKRNVNDDLLEHINTILDHPELYDDYRNNFLTYISVIQDGKYKLDDYLNAIKYCTHKLMGESNMDSFVKTFPNRYQSMIAKGYTAKEMSAHVAMYNKNKLVNTILEQTMIPTWVLNQDLYQKAINVQADLMLNAMSEKVRSDAANSLLVHLKPPEVKKVELDVGIKQNDEIEALRNITAELAAQQKRMIEAGVITAKQNAETKLITKVYDHEA*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0038	shell	direct	high	686	0.999	GCA_009378595.1_00990
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	22528	22635	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	22529	22636	GCA_009378595_1_17_39	GCA_009378595_1_17_39	+	219331	.	.	hypothetical protein	MKHKPPMYELEVTVLVLMIIIFLVWVILGAVNHGS*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0039	shell	ambiguous	low	12	0.111	GCA_009378595.1_00990
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	22625	24214	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	22626	24215	GCA_009378595_1_17_40	GCA_009378595_1_17_40	+	219331	.	PDB:4BIL_D	Large-Terminase	MGHKQPKTVNEWLQEVDYSDLENYVPSKFAIEYVNFIKLVNGEEGEENKTPIIHYKMADSLVSGDRQIANMIFRGAAKSTFLGEYFFLYLAVFGELPNFGVVDLAIYVTDSIDNGVKSMRKNLEYRWANSEFLQKYIPEIKFTDIRWEFKNINGKTLIVKAYGGKSGIRGVKEKGKRPQIAVMDDLVSDDDARSPTVLGAIKDTVHKAIEYALHPTKYKKIWLGTPFNANDPLYEVVESGAWKVNVYPVCERFPCTRDEFRGAWEDRFTYEFVNEKYQTALALGKVDSFYQELMLQIMSDDDKLILDTDMQWYISNHLMDKKDNFNFYITTDFATSEKQSADFSFISVWAVNHKGYYFWVDGICARQTMDKNLDDLFRLVSQYSPLSVGVEVSGQQAGFIPWIQREMFSRNIFFTLASNSKDGSVGLKPNTSKLERFNVIVPDFKLKRFFFPTDKRHTPALKELLLELSQASVGGFRSKHDDGIDTVSQLAMMTIWTPSQEANYQKNTQGIWEDVLPIETHSNLSSYIV*	hallmark_hmm	common_virus	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0040	shell	direct	high	1589	0.999	GCA_009378595.1_00991
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	24225	24977	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	24226	24978	GCA_009378595_1_17_41	GCA_009378595_1_17_41	+	219331	.	PFAM:PF07030.11	head-to-tail-adaptor	MIVREYLDYLANTELKNLNLIDTDTGKIPTNKLSRLMHLLQAGLRELSTRFDLQSENIPYHTKTAGIHSLDLKQAQKHHITSDVLMINHVLCVYAQTDDVLSANDLSHQTLECLSEKAFQEKALKLNLQDTLYQANETIPFYCLASPTKLQLYSPYDVAHYLINARVVLGVNDALQLTDKLPVPTAYYNALGLYIASVAFRSVNNQLGGDVNESMRYYQAYQQEIMMLEQQGIKRDNQPQTHLFHTKGFI*	hallmark_hmm	common_virus	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0041	shell	direct	high	752	0.999	GCA_009378595.1_00992
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	24974	27394	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	24975	27395	GCA_009378595_1_17_42	GCA_009378595_1_17_42	+	219331	.	PDB:5GAI_G	Portal-protein	MINPEQLQEQLLQDPQANQALPDELMAMMGAMTTPTQESKALQFKQAYSMPDDDFKAYGYSKLVKDGMTKTKKQKLTNWLNEPSVQDLKHDYQHAQSAQSKFISDLEKWQQLYQAPRFGDKNHKGSRITPKLIRKQSEWTAPSLSEPFLSTNNLFDVKPLTFEDVDRAKQNALILNRQFNTQLNKVSLVDSVVRQVVKNGSCVLRMGWVYQEKQITEKVPLFNYVPVPLEQQEQANQQLAQLEQLAQTEPDSYEALADEVKAGYEMSVEKGIPYTAEPAGFTEKQAKRVIVNKPTVDICNLKNVFIDPTCRGNFENAQFVVHAYESSLSELKKQGIYQNLGYLMEQHAQADNSIDKPSDDVFKFQDNARRKLTVYEYWGYWDIHDNGETTAIVCAWVGDTIIRMEENPFPKGKLPFVVFNYLPEEESIWGIPNAELLGDNQEILGAVTRGMIDLLGKSANSQTAFPKNFLDSANKVKYGAGQDYEYNQGFDPRVHVHTHTFPEIPNSAMMMVHSMNNEAESLSGVKAFSSQGISASHLGDSATAARGVLDAVSKREMSILRRISEGFIQMGRFIMAMNSEFLSEKEIVRITNKEFVTIRRDDLAGEFDLTLTISTAEANENKSQQLAFLLQTVGNTLGTGLTQLMLSEIAHLRNMPDLAKAIENYQEQPDEMAQQLQQLQMQKLQAEIELMKSQAEENLAKAQVQTVKVGTEQARAESLQGDADNKALDFVERDSGIKQEHDLNKQAMINQGQNEKEMIKQQGLLDSQANQHDYNVLSQLQQHDLNQQAMANEAQMQSILPPNAQQ*	hallmark_hmm	common_virus	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0042	shell	direct	high	2420	1.0	GCA_009378595.1_00993
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	27403	27717	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	27404	27718	GCA_009378595_1_17_43	GCA_009378595_1_17_43	+	219331	.	.	hypothetical protein	MMIDIDTLEQEKIALKRKIQLFRALSNLEHNKDFVTLFKMYYFNEYVLDSVAKLSTDKDNQASLYLGLEMVSQLQAELQNIKTQGAMAEQQLQELSAIPLDEYL*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0043	shell	direct	moderate	311	0.987	GCA_009378595.1_00994
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	27704	28828	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	27705	28829	GCA_009378595_1_17_44	GCA_009378595_1_17_44	+	219331	.	.	hypothetical protein	MSTYEMSEIDYSTLSDEELAKLDLSNVEVNWDNNPINTTQDEIQTAVEETDDNSDETVNEAVTQADKPSSNLDTQNTKATDTDDETVQTESDSDTNTDDKPAEQTDYQAFYEKLTKPFKANGREIQVQNADDMIALMQQGANYSKKMAQLKPNLALMRTLEQHGLNDADKITYLIDLYNKQPEAIAKLVKEADIDLYSFDTDQAEQYTPKTVVNEPSALEDTITELYGNHETFKDVVTDITTLWDKESKAIVSDNPEILRVMAKQADEGIYQQIMSAIDYEKMLGRLSGIPFLHAYEQVEARILQANQPTPKQEQGFTAPRPQANQEHVSNQNQAQKQRASVPKGSASQSNAGFDPLKLSDEEFLKFYNQQKFH*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0044	shell	direct	moderate	1109	0.986	GCA_009378595.1_00995
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	28847	30010	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	28848	30011	GCA_009378595_1_17_45	GCA_009378595_1_17_45	+	219331	.	PFAM:PF13252.5	Major-Capsid-Protein	MTIIYNNGTNPTSVGATQLNPHVFERKALLDSLEEAYFSQLADSRTMPKTSGTMIKQYRYFPVIDDRNSNEMGLDAKGAKYANGNLYGSSNDAGLIADKFPVLGELGGRKNRIGMTRKEIQSNLQKFGVFYEYSNDAVNFDSDAKLLEHLERETTNACMTVYEDKLQLDLLTNAGLVKYAGTATQNSELSHGMELKYADLVKLGIDLDKNRCPKQTKIITGTRLTDTRTIPDCRIAYVGSELIPTLEAMVDYHNKPAFIPAHQYAAGTTLLKGEVGRIAGFRIIVVPRMMKWAGVGAAATDAAYYKTNNKYDVFPFLVVGDEAFTTIGFQSGGGNGKFTTIHKKAGEATASSADPYGETGFTSKKWWYGFMPQYVERIALLKVVAKM*	hallmark_hmm	common_virus	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0045	shell	direct	high	1163	0.999	GCA_009378595.1_00996
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	30088	30606	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	30089	30607	GCA_009378595_1_17_46	GCA_009378595_1_17_46	+	219331	.	.	hypothetical protein	MTTENQTNKSQLEQLKEQADDLGLTYPSKVTIKNLKQMIAQELLKETDADNSEQIQAVEDENLKLVHVIVTSMNSQKASIGFETFQVGNSVIGSIKRVVPLGKPWLVENIILKAIKDKQFQQFIERDDPNNRNNKIVESKLVPAFAVQELPLPTPKEIEELAKRQETREVID*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0046	shell	direct	high	518	0.998	GCA_009378595.1_00997
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	30633	32981	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	30634	32982	GCA_009378595_1_17_47	GCA_009378595_1_17_47	+	219331	.	.	hypothetical protein	MTVNIPNSQALPDFNINELTHGTLDGTGVFDVLMDAVKVHLHEEFKAERIRATDYANAYIRGMEVALQTSSQYAISKAKLGVELQLMAKEIQKVDATIKTSQYQDLLIQAQTKQVTQETDNIKAKLPKEVLILDSQKAMLDAQCLGQLEQNKLTTAQASNITTKLPKELLLLDAQTLQTNKQTDQLTQKLPKELLLLTAQEAQIKGQTAQVTSQTAQIVAQTNAITAKTPKEIQVLDSQIGQTNAQTSAITSKLPKEIALLTSQDLQVKEQTKQIAQHILVEQAQQELTGANVALVSAQASAVSGKLNKELALMEKDIILKDKQVPQLEADTALKAAQISLMNEELKVKQAQVQIAQGELEIKRAQLPLTQAQTAQVQEEVKAITQRIKTEVEQTKLIQANANQANAQTAQIQAQTSSITAKLPKEVEMLTAQKDMVNTQRLGQVEQTKLTQAQTAQVTGQIGLINAQTTTESKQSALVEANKLMVDAQRNTLNSKTSKELLALDAQTGLTNAQTNQVTKQVDQLVKRLPKELLILDEQVKLTTAQVSQANAQTGQINSRLPKELLALDAQVAQTKAQTSAITANVNPDLELKASQKQLTLNQAQHEVAKSALTTKQTSVLDAQVALNRAQVDLQQAQKELTRYELQNIKPQELQLAQQKVNVAREEVKVKAKEVERIPAEIAQITAQKELYSQKVITEKAQTDGQYIKANSVMDKNNKVLTAQAKSFDNDSKLKMANIMADVWKVHHTNAADQAVPNDVNKLNASNIGRVIETAITGVTST*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0047	shell	direct	high	2348	1.0	GCA_009378595.1_00998
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	33061	35727	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	33062	35728	GCA_009378595_1_17_48	GCA_009378595_1_17_48	+	219331	.	.	hypothetical protein	MSLFKKKKTFTNTDSASLYAPSQVSDAKQVKKQAIKQWVFEGSQRPLHEYLLASSQNGLKSRWDKLYELVQTKNIYSEYRWDFGEFSAIGKPLKQLNWKKAAEEYLKEKFPNQIDKFLHIDHGDLWELPSVDAWARKRFRFRQVNKIDHNHEVLIQSNPRYVVVLVGNDYNLQSWYLGSSSYVNKPNYHYLHPKNRLSRAHNYSRAYRTKLETNPREIRELANYPRVKPLSRESYTFVKFLKEDYDKIMREEVASKDTMPIAELIGIDAKSLLPNISTNYVPTPYPDDERDTKPYEWFGAEYIDKQGNVQTYYEHIPDLRNHRIGALASKHTTTIPISQYHPIPIRISDYDMDKDSELLTGNSLLGKLFLNRQRRTEQLKQSHERIAYDRAYAAEALAVLGYDIKELISSFRDSMGADWGKLDDVWIHLSVPLPYDKSDFDVPVLHKYWHLYNYMMFKFRIATYFNPDYQAYYRQFTYMYSLPTEYGGIDDTVFWRQQGNPFTFQSHRFKVMTYNREHIDDFRSNFIRHNSPVNEYELENSTERMAQRINTSNGSIFDIPNELLDIRINHQTNGSYTRPDNYWFVPYNLYPYNRIPKTTRTPIGKNSTLMASTLYGSRVVGFTTLAYHNLPVIPYLLKQLTRHEQDELLQYAMQLHTRTEETVKVYRDWVKPAVKFGAVIVGIAVAIITGGGDGGSTYAALVALAKSLAVSLAINFVVKIAVKLGLVSPKLAGYLQLIITVVMAAHGAGWDFSKLITAPNIMTAVNQSFNAYNKQKAYELAEVYKQIQDETVKYQTKTEALKTKQKMLDLGVAKDAKLYLNMPSYAPKVNLFETPQMMYARHSNINVVNLSLGTVSNLADGLLSKQQTPNLTTVADIQQQVEDVLLIT*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0048	shell	direct	high	2666	1.0	GCA_009378595.1_00999
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	35751	36338	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	35752	36339	GCA_009378595_1_17_49	GCA_009378595_1_17_49	+	219331	.	.	hypothetical protein	MNEIVANPFYVPTVGSYLTNNTPTDTSTIAPTTVPTMTLPADTVVSQPKFRVDTSNPRYANYNGLGLPSQQQQQWRNAVGSVGSLIQSSLSNNTRGFRNSWGQMSTGEKFNTGLKAVGSILEAINARKAHKLAKQTLAHNMMNHNRNYEMQAKAWNNTLEERQRYRNAYWEANNKGTGIARPESIGEYLNRYGAK*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0049	shell	direct	high	587	0.998	GCA_009378595.1_01000
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	36338	38419	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	36339	38420	GCA_009378595_1_17_50	GCA_009378595_1_17_50	+	219331	.	.	hypothetical protein	MSNFDTVFSTAPKWANVEAIDATDVINSAYKNAELQNKAFKQLTEAGADVFTYAQQHKLNEVEKEINAMNLDQFQTTDKATLIDDLITKYGTDIGGFDAANINSINKYVDGRDTTLIKDAVDAIDYDSKSRKNITEAMEFDARNTADVIHNLSINAGLLPDGTPDKDKLNQQIENITGKFIAKYPFGNESLNKAIQSIKDGEIEAKTKEMQLDNAFADEAIKLYAPIYISYLSQSDAIKAKEAKANKLEDAEAKKKALDDIAYDKAALTSHYDPKMVEFLKNPYILARLEQKVYDDFHNKRMNEVQYQAATSAIENAKKELELKKYSIDKAAQTASEGHAVQLAGIEAKGDGSGSSSSEVKARKETNLNRIIGMGVDKKLAAGFIGDDGEFSPAKTLATVIAHANGLKTNEDNLFNTAYDETYSHWLNTKAIQMAKQMGVSEKAFNAYKEVVAELGVPEIMKRAIIEAGISGRLDKYYTGNGSGPFDSNAVFRNEFRSNIRYILQEKKMLETLEKEVKDNAYHRNAQEFQKILNAIEVAYPTGMNGFIQDNAKTLINNMPFLYYIGPEYREMVKKAASITSKEKQPSPTNHMSRNAGNTLGVLQQPTAFPTPSNTSPLTGLPKPPPTQKQADKPKDIGKQSTQQKQQSKSNDKEKNQSKTPTSTAPKTPVGWERSVENGKESLDKVLKYFNLR*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0050	cloud	direct	high	2081	1.0	GCA_009378595.1_01001
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	38511	38768	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	38512	38769	GCA_009378595_1_17_51	GCA_009378595_1_17_51	-	219331	.	.	hypothetical protein	MNKKPEKITIKIKKEDLGDLDEITIEVQQRESAVDRVLNKSIEGAQSLHHKAKVNGWYRKIKILVITVLVIYLSIWITIFIEILI*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0051	shell	direct	high	257	0.996	GCA_009378595.1_01002
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	38908	39333	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	38909	39334	GCA_009378595_1_17_52	GCA_009378595_1_17_52	-	219331	.	.	hypothetical protein	MAIKREKALTTPVIDAVNAELQTNQQRAELEKVRMLWFRVAVIVALAIAITFALLAIRLVCAYIRLTQSLTVVPALEYYWHMPLMFLLACTTLVIITLHSVASFGQSNEAKDNNHPAESLLDKVTELCNKVVELISKSESK*	.	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0052	shell	direct	high	425	0.998	GCA_009378595.1_01003
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	39324	39800	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	39325	39801	GCA_009378595_1_17_53	GCA_009378595_1_17_53	-	219331	.	PDB:3DTE_A	IrrE-protein	MTYAVNMARNILSTYWDRQLPIKPEDIAEALGVTVILDSDMEDTTSGSYSLDGDQPVIRVNANQHSNRQRFTLAHELGHHVLLHGEREDSPVTLFRQEGTTNNLEIEANAFAAELLMPKGVIDYVVENATKPTIQYMAEQFWVSEQAMIYRLRNTGWL*	common_virus_hmm	common_virus	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0053	shell	direct	high	476	0.998	GCA_009378595.1_01004
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	39928	40254	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	39929	40255	GCA_009378595_1_17_54	GCA_009378595_1_17_54	-	219331	.	PFAM:PF03374.13	transcriptional-regulator	MSLTKIDLLISTFQDAITVLTEMKEEVNEPKPVILQEPSASTTEVYLRTEVLYPWVKLKRWCKQNHIQPTKKDHYGLMINHYPASAWLEVFGVDIIEIMSLKLIDEAV*	phrogs_hmm	hypothetical_protein	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0054	shell	direct	high	326	0.997	GCA_009378595.1_01005
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	40388	54937	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	40389	54938	GCA_009378595_1_17_55	GCA_009378595_1_17_55	+	219331	.	PDB:3Q23_A	Virion-RNA-polymerase	MSTDLDKVLQKLQAAQSRNIAQVKRAQKGMGIETHSERQARLQKEAEIKKAEHEAYYSNVANNLATSLTPHSYFTPKPANRLETGNILTDTGWGAASGVNSLIQGGLAVADTMLTQHVVNPVNNAYSMFTGDSKPLIPMPESEQKIAGRVVNAGIYQAALKKLGIYDAKAIEEYIAIKHSNEYYRQKAEVNEAVKDIENPVLKAVATFGHSLTKPNLLAAGAGSSLPQALPAGAIGRAAKVANAALSASTRAGIGTAVTSAVVEMGDTAKDKGYSTHRDTAYDLATGAGLGLVNKALPSSFSTEQIIANGGVSRILANSTNRARTTAVNTAIETGQEAVQGALESALNQQQKEGKIDWGKVGKDAGMEAAAGSAMAGGPAVVGNIKAAVGDVKGFRSTLKTNPNNKNYDPNYAYQVSAGKAALGEIGIDSAKAEQTQALTTAMSRLTEFDEKLAQLPDGKEKQKLQKQRNDWFNNQVQPLQDTVAALEQVGNLQLSQEMSSDEVLQRILDLNAEAYHNRKQQADQQLTDAVNYQPEIPEYTNVDGVGTSTTNIEQASTGVIAIGDSIANAFGNQYKKAGVTSYSKDGRNPNEVLNTITKLSKSELQGKTVVLSTGLSNNTKADLNTIRKQIKYLKDNGASVQVMGVANNFKDDSKLGTRMNTDLANIAKEMGVTFLGGFDYAKADKYKAHPDSGWYKPIYDKVGITQAQGQAVTGTSQYSTNFSIDNSNKSRDDLIMGTYTAFRKAGFTDGQARYLIGEVNRENGFSAKTMFGSHSDHANGANNFGFISWQQGRRTNLFKFLKDRGIDVKESGIPQTQASLDAMAAFFMQEMKSGGITLSQYRGGTYDTRNFLKQANPDLKDRRWGHAAIGWAYGQNKLKSGASFDSSTHEAKLDKGHADINRLLGSNYTGSFSSQSNNSNINVDDNRTAQERLESLITKLKDEKTKTKEAEAQKALQDKISSLEAQVSDNQTNSQQEQVSVESEAVSKAQQDTFDEIIRYSEMLSDDMINILVEQGALSEKHAEKLRLLKEVRVVENATKNADDVKHDIYIGKKAKRAEDGYIGLQSYQQGLVQYLKTDDIGVLDSYYNHLSRFNESHTSKAIAAKQAMDSFDEIQQPLYIARKADSQEWEVHEGSISKELRAKTGAIEISNISRNFVNNLIEEAFHLNQIKQGYDKAYELHGASDRIKESVKVSDIGLTDFSQINTGVSQQQQQQPVSIKTPTEQTAVQVTRASNINQTPVADVTTSDPTIEPTTTPTQESIPVTPPVTKTPSSVPTQRKPLRLPTNPYNDTLARDSSVGEYQRKIQEGVATPNYVWLGRGERQVNDEGKMATVSLSSIYRGTGSAKDPKTGQVTVRSNVFTDENKEVIKAGIFGSPIQSPIYVNSTNAHDQQKLKLIEEFGGDMYSIVHDGTQAGKDAAMIESANRYMDFMRVAVSNNQDFSRALLQMAANPNTGFVVQHKMSNSAFSEAAIVPRVVEELRKHPALQKISYKEQPQAVFNVLSNMGTLMADGQFHSEIQRPIDTNTFGKEDNLYKPHVFSKDDLNKFNEYTATNSTSNTSTGLNSGNAGNNTPPNITDNNGITETGIDENTNTDFDLSVFESHQNNTTEATKTLPTDVSTNTKENSTQEAESSADESVTPQETVAVKRNSSIPTNRASNAITKETVLKPMQVRKLESTSKAKEENKAEDTVYITNTPIEKSFINKPVKVSDLASSIESSQIKTKDKSQAENQALISVLSKYSPDIKVKIQDKTSYDEKASYDDDIIRVSEDSKDITRDIAQAMVHKQIGNIADELDTLDHVTALANIEAKKQRDANRKEGKQNTDTLFDDEVIDRQAKLGELRLTIDSINKDVRKHMRKILSDPNQKFTENSKALLMRATDSAADLLQLGLFNEDVKSVLKQVKVSRGKNKITKAYHALMDAVTNFFGFSKDESTAYTKLLGIVSDSTSLSVLDSEGNFSKSSEAKIRQLNEPAKNIEEDLTKPITATKDSKAVRNILKTSFRQVQTLHKPLSSIQNFVRELYTNPVKASQILNLEPPTKAQREQINDFAEFTAEFREHLKQVFKPTDEGYENRALANYFYDKQTGEFDSNVLDALSYGAYDYLNSVANHTMNMRDDILALLGLTSKDVEQKNNAYITKEMWETYKYIGSGYVKVADDLGKRIAETLNIQRTENGSITVDSRLYSALGTWALSAMQSADLIHLHSISSEKHKKAIEEVRGVIDEKDFNSHGTVRFVSITNKEGEGINKRINEISEANKGTAGYLTDIMGGVSAVRMPSLKPIEESVANVKRRIKRTDATVTDLQAQRVAKAQAHANVINEPTFSLLTNLASQHEDAFLEMIGAKLKEGELQTAHINDRDGLEGKAEAVMRDWTNAVDFINSIPKVDGVRKYWDTMFMAVNSRMHYNSNVFNYQSSKLHRAMAEPSNFKVTVQLKNKDGSSVLDSLQSKLKEHGKEIHSKHLTKDELNLTYFLRALAENMEGSEDFIEAYFKNTGSKEIFTEGFTVDKLPSYVFIPAFIEYLNQEHIQKATEIVSKAQAGDKISSEEMNHLSSVIDEMAMTGSSLRALREWADFQTAQENNHANFTTSLGLGSDGLNNGAALAHFWNGAFYKELLLRTGFFSFNDPFKSYFDARHDKNLGDYYTAFKNAVINEKAQEAFIMGFHANLEKDLANHNKQVFRALMRVQKSLTKRAVAKSVLIPFNYGAGIKSLKKAVFRTFLKEMQDNITLAAQQDIANKKALEAGQMTQLEYDTQRAKLLNQVMTVDRLFSFMTQKPIQWDITIDNEPKAVVINENLDLKYMLEAWISPKDEAMLDNKYSFTMGQYLAEVLQDYEAVYIEKNKVNMRILSSTVELFTQMYHEVEERAIQTVAERISNALVETGLDRGLANELALKEISYRGLSDKEREELVHSVMDKVQAQIHNVYSVQNNESKAKVRLTRLAEILFVDKANLTNNSFFLVNKSGKYQATSFGSPARHIHLEDKALLANSVQTQSMDSYISSFAMAMGKKININVHDANIGAIDNQLDMITQQNRATFQALVSYHGQLESLRALTSVIQSSYALIKDGVIRKDFHDNEVFAELTQELSSLVDEVRDTELNKLDQLANLAYLHQYAGEFGEYQVTDADRQTALKEKNKVVDQINQLEKDLALNTTIKVMSYEPNKRTDTTKQQTSESGIVQLSDTRATEQVSQLPTTSTGTDGTQGAAFTNSSSTPTEPTIQNLKQLDQTIKGLVNVSEVQLKLNKMLMGKANQHLSKMSVKFADVTTPNGTRAYGSYNVTTHTLTLDNQTFSQSGNDENKLRVINHELVHALTEYAIISNAQDLRSELNHLNKMLDAVMAQWQEDVAFNKKYGHSRHDTKEDDLTYVNQIMEVIKASQEADTTNGNHYAGLSEFIAYGMTDPEMMRYIDYTLELADLGIKPRKDISSVMDFLVRLASKVLGFKGDGYKAFVQNVETIMDNPPVDLLTLTSNDTRFSASAMKSVQANIKRGTEAMNKAITTKADVKRAMYRNDIGWIDFVWGSTGILKANGKTKGAMGISHIIEARMRKDGMSYDEVVEMLTGGIVEAIAKGEVIREIAREKTQRLTVLHDKTIIHLIKQAGSNAWLLSGYEENQMVNQSRGATTSDLRTNSPILSRTDVGASDKTSMLFEDGTGKGYGKTSPTHNQSYSARTDVGASNETNITQLTTDSNEDTRYSQIFDETDKQSASEVFNSLDSQTLTDGWNKHLQEVWDSLFDGNIAYSTLSEMEQKSLLDTAKQVNKVFVPHTFNMVVKEQLSYQAVTSIVDFLVNNHTDSNITSELNKIHAQLIKAYPTAADLYPDYHTANDEVKNLYDTEHSKLFKSIGEMNNLASVVALVLSSQTFNELTDQKVELRKTKHDSWFDKFMNLWHKAMNLLRTKYINANSTSEATKQLMAKLVNAETNARLARVSMIDKAWNTIYQKPMDAANWVWDKTWDIGSEAIISGLPMSSQMRDTWRSHKERIKAAKQSENLSKSSVAKDSMNLTIEAGLAITGLDMNMSYGGNQDIKSATRGFIKETVNEMLGQRGVGHTVERVIRIVNKVAQDRANYKQSMLNNFASIMKDPKRFDNHAKQSITRTVMMSDAQTLLHYHGMEQTLNYIANSKQRKVRIKELEDKLQSLSKNREHFNQLLKDTKDLAWYMVGETVSGDVKKNAELIATSAGTRSITPYEQMDQNIFEAVDELVTLHGLEMVNGKYMYTTQDLIQNEGQVLIAMLNTHHDLVKKSKEEFKDNPLNYIKGFKPAIHNPHVDVVAVKAEEVDDYIQKGYEQVLHGSIVQDELDNTEPRYLMINKNAPYARYNSGGLDMKDTHFRGYEVFNYKTNAKELARVGQGRLKRNTELAKTMDARSYDPRNIKGNHLIPRYGNDMLILGYNYEMSGELRDKLLDRDLSFDMMLATMGSELVAKPKLVDTQRTLAQVLAEDAKNPTTGFKISPVHFTVINPNSPDPRVQEMLRMMPYEFYQEMQHQFGKGKPFVIRTAVFNSVFGFRKYNVSEMFDKVSGERNYFEKFMVTLYENIYGKQARNKAANHQYVWEWFVTQAKDLIVIRSVKVLIGNIIANALISAAHGITPTELARGMFYAWKEGKAYRQLQAEEQRINFEMLNATSESQRKKLKAQLVAVRQNMQNSGMHEYMEEGLMSTIVEDIDMGSETKLFKSDFEKKLDNLAEKIPQPVRTTMKWATFHPDTEIHKFLSESTQFSDFAAKFVLAKHIERKSLKMGKSKKAAFEDGIQMAQEVFINYDIPTNRTLQAANDLGLFMFTKFTVRFQRALARQLHQNGGHAMLQHFMVEEYLPVAGLLNPFFPMFNTGLGAFTGIGALAQLPLIAMFL*	common_virus_hmm	common_virus	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0055	shell	direct	high	14549	1.0	GCA_009378595.1_01006
GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote	cenote	CDS	55581	56438	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C0	55582	56439	GCA_009378595_1_17_56	GCA_009378595_1_17_56	-	219331	.	cd01572	Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid (QA) with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to produce nicotinic acid mononucleotide (NAMN), pyrophosphate and carbon dioxide. QPRTase functions as a homodimer with two active sites, each formed by the C-terminal region of one subunit and the N-terminal region of the other.	MKTPLFALPDALLIPTVQAALLEDLGRRGDVTSAAVIAKNSTANLAIVSRDTGILAGMDLARLAFECIDKTINFSPNASDGDTIKSGQVLAYVSGNTQALLQAERTALNFLTHLSGIASMTAKAVAQISHTQAKITCTRKTTPLLRNLQKYAVRAGGGCNHRMGLDDAILIKDNHLIYSGTLKQTIANAKAAAGHLIPIEVEVDTIAQLEEALEAGADFVLLDNMDNDTLKHAVSLCQGRAKTEASGGITFERLKTVADCGVDYIALGYLTHSVINHDIGLDFLD*	mmseqs_cdd	nonviral_gene	C0	56439.0	0	56439	GCA_009378595.1|RCJR01000003.1@region_1_56439@tool_cenote_CDS_0056	persistent	direct	high	857	0.999	GCA_009378595.1_01007
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	193327	194733	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	1	1407	GCA_009378595_1_17_182	GCA_009378595_1_17_182	+	219331	.	COG2951	Membrane-bound lytic murein transglycosylase B [Cell wall/membrane/envelope biogenesis]. 	MKNQSATHWALSVMTISVLLSACTSHVTHERAPIKVVQVTPNPTQVAPPAQVPTQALTKVPTSTVQPTTAKPASVVVQKSVVVQKPAPTNTPSMTTQSHYATFAEWKHDFIHRALAKGINANSLNALMGNATLNQRVIELDRSQAEFTKMPWEYVESAASSNRISQGRSKLNENLSILTSAESIYGTPKEITAAIWGMESSYGAGMGSMDLVSALSSLAYDGRRREFAENQLLAMLLMIERGDVAASQLKGSWAGGMGHTQFIPTTWIQESIDGDANGRKNPWNRQDALTSTASYLANAGWIRGLQPFYEVRLPTGFDFLQLNSKRSLDAWKALGLVSASGEYFGGVHEAQLWLPAGQYGPALLLTKNFEVIRVYNNSSSYALGVSLLAKKIAGGHDLVQSWPRHEQPLSRTQIINLQKNLTAQGYDTQGIDGVAGSNTRQAFARWQAANGQIPDGFISQRTAGHLVW*	mmseqs_cdd	nonviral_gene	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0001	persistent	direct	high	1406	0.999	GCA_009378595.1_01133
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	194853	196967	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	1527	3641	GCA_009378595_1_17_183	GCA_009378595_1_17_183	+	219331	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MRLPETTRAERQTNQLARRIQEKAQLTGVNVSGTQISSQAFEMVTDFEPSGDQPKAIAELVKGVEVDMRGQLLLGVTGSGKTYTMAKVIAECGRPAIIMAHNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPASDTFIEKDSAINDHIDQMRLSATRALLERRDAIIVASVSAIYGLGDPESYLKMLLHIVVGDRVHRDAVIKRLVELQYERNELDFGRGTYRIRGETLDIYPAESESLAVRIQMFDDEIEKITWFDPLTGKNIKSVPRITIYPKSHYVTPKDKLEAASATIKEELAQRLEYFRANDKFIEAQRIKERTQYDLEMIGQLGYCNGIENYSRHLSGRPAGEAPPTLFDYIPSDALLFIDESHVTVPQIGAMYKGDKSRKETLVQYGFRLPSAMDNRPMKFEEWEKISPATIFVSATPAQYELEKSEQVVEQVVRPTGLVDPILEIRPVLTQVDDILGEINLKKSLDERVLITTLTKRMAEDLTSYLKEYGIKVAYLHSDIDTVERMKIIHELRTGIFDVLVGINLLREGLDMPEVSLVAIFDADKEGFLRSERSLIQTIGRAARHVNGKAILYADTITPSMQKAIDETERRRAKQIAFNQEHGITPKSASRAITDKIDTGDDETSEVVQIVLSQALAGVDENILHSPKLLAKEIARLEKQMQALSRELKFEEAAKVRDTVIALKELLVQ*	common_virus_hmm	common_virus	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0002	persistent	direct	high	2114	1.0	GCA_009378595.1_01134
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	197008	197649	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	3682	4323	GCA_009378595_1_17_184	GCA_009378595_1_17_184	+	219331	.	cd10032	Uracil DNA glycosylase family 6, includes hypoxanthine-DNA glycosylase and similar proteins. Uracil DNA glycosylase family 6 hypoxanthine-DNA glycosylase (HDG) lacks any detectable UDG activity; it excises hypoxanthine, a deamination product of adenine, from double-stranded DNA. Uracil-DNA glycosylase (UDGs) initiates repair of uracils in DNA. Uracil in DNA can arise as a result of misincorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations. Thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other.	MPLLFNDQVKANFMFNQLMTIQTIHRHPLPPFTPPNACVMMLGSFPPPPERWAMPFYYPNYNNDMWRILGLVFFDDAKRFIDSTHKTFDQDAIEQFLTKTGIAIGDTAEQVIRQKDNASDQFLQIVTPADIEKTLKQLPRCHAFITTGKKATEVLCQQFTSQKIPNIGEQVQLLIANRRIDLYRLPSSSRAYPLAIDKKADFYRKVFETLGLL*	mmseqs_cdd	nonviral_gene	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0003	persistent	direct	moderate	602	0.938	GCA_009378595.1_01135
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	197713	201660	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	4387	8334	GCA_009378595_1_17_185	GCA_009378595_1_17_185	+	219331	.	PDB:1UAA_B	Replicase	MTDTILTMPPTPPKPSEQIAALQCTLEQAYLIEASAGTGKTWTLTGIILRLLIEKKYPPERIIATTFTRAAAAEMQERISERLHSFYGLMRWLQGMLSTQPEWFNQAAPIEQIITYANQAGYDAADPINEHLLKFILSQKATFLNEVVYRTGLLLTSLDKLFVGTLDSLAQKWLNEFAAQIGHQSGMEILNNAEQKVAAIVHDEMRAEEVRLKHAQPEFYQIFKAFYPNFFSQVDAVVKIVNKAINFYSAPIDELMPINTDISLVKAMIDQIITTDFTGFTPYFDANFRKQVAMNQSLGFGKLIQYLPNLLSLIQKHGVLFVRFVDNDALKLIDAIIKAMDKDWQIFNKSANPSDINQFLALPLQALSDIANVYLTLSEQTNLYHTHICRHIILSAKSQIAQRLETHGQTTFTLQMVRLNEALRNSPALARQIRHHYPVALIDESQDINGLQVELIELVYLNEIANYHKNLIRYEQIGGEKPKLPRGFLLLVGDPKQAIYRFRGGDVTNYNLIKHYGNQDLLIKAPLMNQSLSLTVNRRSSKALIEALNAWFDNNHQDAVANHANLGQGIFYQQIQAHKDGGGIHWQSDAYADYYGKYPIAVLHFDHIEAGQKAAQRAEQIARHINTILQGDHTLHGQKILPKDIAVLGRTADTLDRIKSELDQLNIPAIIPKEMNIFITQAADDLLALIGAILQPNHSENLGKFLVSSLVGMTLKQAINIIEPNDQQALDNDLSETQNLKTHLLAYLKKSYEKWQKFGVSSALAYALHHSPIDYDDDKSPWLKAATQGERYLVDLERLVALVSEQSQLHEMRIIAWYHKQMNADVDSHNKRPILPSESGVNLMTIHKSKGLEFPIVYVIGMDEKPKNENGLTIYPYTNHNFQRCLSLSQGNLIDENYYYHINQQELIDEIRRLGYVALTRASEQLYIVGGDLSKKTSKEMPLYQWLDCAGEKILSLPDRLKGWVDWIDLTEADLFSQPYQTKLPNLSAKHYAPWDMVMTKTQFFGEYKTSFSALITRLDKSAISPDEADIDQLSVLTDMAASDQFDDIRTSFFKGSLAGDFLHKVMQFLPTDRLALASLHDAHRIISGVIYEQGRKLGIAERYLPTRPAQQIGTRINSNEHQADDHTKLVAWIYQLAYAPFRASHRSLMSLPMTVQLRELSFTLGLGDTFSITRLNEVFKAHSDKDLVLLDDDYHTMRYRYLRGEIDLVYECDRRFFIVDYKSNYLGSTPDEYHDHAMAAVMDKVGYWLQAAIYQVALHRLLKIRLKDYVGNEAAYLGAVEYVFLRGVQEGNEKTGHLCWQPPLSLILALDEIL*	common_virus_hmm	common_virus	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0004	persistent	direct	high	3947	1.0	GCA_009378595.1_01136
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	201694	203751	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	8368	10425	GCA_009378595_1_17_186	GCA_009378595_1_17_186	+	219331	.	PDB:3UPU_B	ATP-dependent-DNA-helicase	MAGDIISRYVTDRVQDNHQWYAKKQVLAAECTLRLPDFELYHIVQDALLFQLNQGHTILHINDHDDLNNRHGLNGMIPIWQQKIMDSCLTVITHALANEGMDWAAFFDAYHRCADDTIKIKQFVNHALNHFRQQVSLLDHTVMEIEQLSALFLSMLRIYYVLYKNANTLNQFVSLLHNNTFFGDILASNIQSIPTNTPPIYFSDQAGGLYLWTSRAYLAESQLMTHILRISQADVPIFALDQLPNSLNTEQRDAIKLVSKQAFCLITGGPGTGKTFTVAQIVIALNQRDEYKKMRLGLAAPTGKAAQRMSESLLKSLDKANDIQLPKPKTIHRLLGIGANGSPRYDAKNQLPLDMLIIDEASMLGTELASQLFAAIATGCRVILLGDTHQLAAVDAGAVLADLCRIERLRHLRVNLTASKRFTDTSGVGQLAKLINDDRQNIHFDEIQQLINCHTKIDFHPITHALMHNDTYQKLSQDYQDYFLASKRLRFSFAKLSSQDAIDSVKKLFKILDTYRILCASHLGTFGDDQINDYLSLAHRAVQKIPPSVSPWFHGRVVMITKNLYDLGLFNGDIGICLWGSSGLSVYFEGEALRMVAVDMLSDTVVSTAYAITVHKSQGSEWQKVAIIFDGNSERLLSKELIYTAVTRAKSAVHIYSTHDALINAINTPTVRQTGLDKVSDSQQS*	common_virus_hmm	common_virus	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0005	persistent	direct	high	2057	1.0	GCA_009378595.1_01137
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	203874	204896	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	10548	11570	GCA_009378595_1_17_187	GCA_009378595_1_17_187	+	219331	.	COG0042	tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]. 	MTDNKLQKSLKNQHILSQPLSIGGLKIENRIWVAPMAGVTDNPFRRLCKSFGAGHAVSEMIIADTALYARKKSLYRANFDGEIAPISAQIAGAEPDKLAQAAQFQVANGAQIVDINMGCPAKKVCRKLAGSALLQDEDLVRRLLDSAVLAVDVPVTLKTRLGFANGQENILKIAQIAEQAGVAAITIHGRTREDFYTGQARYELITQVKKAAKIPIIVNGDIDSPQKALDIQAKTGADAVMIGRAAQGKPWLFQQIAHFANTGELLASPTVGEIHEVVLRHLDELYRFYGEYSGCRIARKHIAWYTGGLPNSNAFRDAMYACETTKEQFEVVDKFFKTIS*	mmseqs_cdd	nonviral_gene	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0006	persistent	direct	high	1022	0.999	GCA_009378595.1_01138
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	204904	206457	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	11578	13131	GCA_009378595_1_17_188	GCA_009378595_1_17_188	-	219331	.	COG1570	Exonuclease VII, large subunit [Replication, recombination and repair]. 	MPKNTTIKHVEALGSTLDDPETLLNKHRQIAESFEAKLAKEAVFDENFNNLADAHLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTKGGHYYFELAETDDADQITASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYGFSLNISDIDPNYTLGEIAAAYTQMKKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLALAGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDNLPDLLVIIRGGGAVGDLAYLNDFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKAILGIESHLVKMTRQAVATMERLTKMTNTHLTMAQANSQRQIEKIQRSSLHAVNMAKKDNLYQLSHIKSTAKFRHHQEKSALTALLAQTQKSSLAIISQAKHTTKIHLDQHNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTLIHNAQTNESIHSTKTLQQNQSVKITFKDGTVSAVIKDISTHKNT*	mmseqs_cdd	nonviral_gene	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0007	persistent	direct	high	1553	0.999	GCA_009378595.1_01139
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	206639	207745	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	13313	14419	GCA_009378595_1_17_189	GCA_009378595_1_17_189	-	219331	.	TIGR03707	polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1). [Central intermediary metabolism, Phosphorus compounds]	MTTTPKPKTATTSSTIATTVPKKTTSTRTKVSTATETKPKPSKAEAIMTQTVGQLEELLEHATPEELAEFGEALKEYLPTTHVISQVRTDKSRDTQLSDNWREGGYPYKYRLSRKNYEAQKYKLQIELLKLQHHIKTTGQKLVIIFEGRDAAGKGGTIKRFMEHLNPRGARVVALEKPTEQERGQWYFQRYVQHLPTAGEIVLFDRSWYNRAVVERVMGFCTDEEYRIFMHQVPEFEKHLVESGIHLVKFWFSVSREEQRVRFASRENDPLKQWKLSPVDKASLNKWDDYTLAKEAMFFNTDTAEVPWIVIKSDCKKRARLNAMRYVLNKLTYENKDIAQIGNIDPLIVGRAGALYEMDERTDLTVST*	mmseqs_cdd	nonviral_gene	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0008	persistent	direct	high	1106	0.999	GCA_009378595.1_01140
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	208431	208538	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	15105	15212	GCA_009378595_1_17_190	GCA_009378595_1_17_190	+	219331	.	.	hypothetical protein	MTDKMREAYEAIKAEQALQRQSEALMCMFDRLEKA*	.	hypothetical_protein	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0009	.	unmatched_CDS	none	0	0	.
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	208583	208969	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	15257	15643	GCA_009378595_1_17_191	GCA_009378595_1_17_191	+	219331	.	.	hypothetical protein	MFGIKLLHSDDFIKSASSFGCFLAIMDKQTNKNHVYNLSTQVQRFELIDIDQVANLANSVQNGAISATVGTLLVRAGVLPALVALSIGAGLPNRTKDAYVCHIEFDNGKSAILQLSKHKYQQFLKHIA*	.	hypothetical_protein	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0010	shell	direct	high	387	1.0	GCA_009378595.1_01142
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	209032	209250	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	15706	15924	GCA_009378595_1_17_192	GCA_009378595_1_17_192	+	219331	.	.	hypothetical protein	MALAINIVLGANTVHFSRNIQKATQNAKKYLQGFALLAYMQAADKDKSVQDFLIIDPNPMTDEQKKPLLSAL*	.	hypothetical_protein	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0011	shell	direct	high	218	0.995	GCA_009378595.1_01143
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	209383	209562	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	16057	16236	GCA_009378595_1_17_193	GCA_009378595_1_17_193	-	219331	.	.	hypothetical protein	MTAETFHLIPAITGAVSGAASVGLLNGPLQTFQDIWFVVYGHKWHYKIANCEYYQARAI*	.	hypothetical_protein	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0012	shell	direct	high	179	0.994	GCA_009378595.1_01144
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	209614	210264	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	16288	16938	GCA_009378595_1_17_194	GCA_009378595_1_17_194	-	219331	.	PDB:2FJR_A	Repressor-protein-CI	MPSERAKADQFPKMIRRYSKGQAKPRNDKMKLLTQCLGVPITWLDYGEGEMTKNNDKLTPITEWDNGAPLDDDEAEIPFYKDIAFACGHGAVNDDVTHETRKLRMGKRTLSNLGVMSENAFAVTARDDSMTPYVQDGDTIYIDKGRKEIKDGRIFAIRFGELCLCKRLYRLPDGGVRIVSDNAAEFPEQVATKQQVIDGEFEVIGWVWSVSRLERW*	common_virus_hmm	common_virus	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0013	shell	direct	high	650	0.998	GCA_009378595.1_01145
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	210467	210835	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	17141	17509	GCA_009378595_1_17_195	GCA_009378595_1_17_195	+	219331	.	.	hypothetical protein	MNEFIIPNSNSVSNDFNYSRTDLDAQEQQIAEFIKKGDKVINLDNSEQPKKKSAKKRDFNNQRINSKMHLVLCYLKRSGKRMTGLQIQEKFGISATTLGSQTRLLNAQASKQYNQNSNPSRK*	.	hypothetical_protein	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0014	shell	direct	high	368	0.997	GCA_009378595.1_01146
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	210832	211182	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	17506	17856	GCA_009378595_1_17_196	GCA_009378595_1_17_196	+	219331	.	PFAM:PF05133.13	portal-protein	MKHQHSQASLCVANINEGFLSLLNWCNRYTGAKHPPKFVIRQQFSQHAVDIGLLTQLSGLIDADKLPKSVLYDKAREFNLISGELSNDEIDGLIEQPSITYEAFNQFRKVQGSSGK*	phrogs_hmm	hypothetical_protein	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0015	cloud	direct	high	350	0.997	GCA_009378595.1_01147
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	211133	211375	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	17807	18049	GCA_009378595_1_17_197	GCA_009378595_1_17_197	+	219331	.	PFAM:PF06152.10	head-morphogenesis	MKHLINLERFKVHLANKFKTTLNEIDEFLQLVVFRHEISELNYKEFELLIGESKQKLLGFLVGYALELTQDWQELYNYST*	phrogs_hmm	hypothetical_protein	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0016	shell	direct	high	242	0.996	GCA_009378595.1_01148
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	211372	212046	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	18046	18720	GCA_009378595_1_17_198	GCA_009378595_1_17_198	+	219331	.	PFAM:PF06152.10	minor-capsid-protein	MNEPQFDADSPIKLSAQVGVTLNQILAKFGDEQSTKISNAISYAYANGLPNQELVRIIRGTRKNRYQDGILQITTRHAKTIAHTGTAIVANQAKQQFIHDNKDIIKGIKVIATLDLRTSSICRGLDGVFMPLDKARYPPYHFNCRSSFEIVYDGYQTPKQRASMDGVVKNQSYYEWLKNQPKAYQVEVLGKKKAKLFQESSVDEFKEFDKNLRPMTLDEIKAQL*	hallmark_hmm	common_virus	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0017	shell	direct	high	674	0.999	GCA_009378595.1_01149
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	212119	212853	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	18793	19527	GCA_009378595_1_17_199	GCA_009378595_1_17_199	+	219331	.	PFAM:PF06810.10	minor-structural-protein-	MQLKTDENGNVVVQDGKPVYMYDDGQEIAFDAMQNMAKISQLNAEAKQHREAKEKAETLLKAFDGLNADDAKKALETVKNLDDKRLIDAGEVEKVKAEAKKAFDEQLAEKDAQINKIKQEYNNAVIGGAFARSSFIKDKTLLPSDIVQSSFGSHFTMENGKIVANLGGNPIYSRKNPGELADFDEALETIISQYPHKDSILRGSGASGAGATQAGVGKNTPKSLADCKTDEERVAWLNEQNNGE*	hallmark_hmm	common_virus	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0018	shell	direct	high	734	0.999	GCA_009378595.1_01150
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	212856	213809	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	19530	20483	GCA_009378595_1_17_200	GCA_009378595_1_17_200	+	219331	.	PDB:4AN5_F	Major-Capsid-protein	MAFDLVKFNQETHLVMTETIAQQVDKFNAQSNSTIQLIAKPFKGDFDVASSFKAIANLVRHRDVENGQNNISSARLTQHKNVAVKIAAGTPEILWEAAQYNWTMQNPQLAAIKIGEQLGRATIADMLNTAIKCGVSAIKGNTALVEGDGTTALDFASLTKGASRFGDRSQAIGAWVMHSGALTNLQLKALGNNERLFTYENVSVLRDPQGRLFIVTDCPDLVDESTKHNILGLTEGGLIVHNQNDFNSVIVPKTGTENITNAYQAEWSYGASVKGYTWDMTAGGANPNAGALATPTNWKKTASSDKDTAGVLVVAKA*	hallmark_hmm	common_virus	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0019	shell	direct	high	953	0.999	GCA_009378595.1_01151
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	213819	214061	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	20493	20735	GCA_009378595_1_17_201	GCA_009378595_1_17_201	+	219331	.	PFAM:PF10281.8	Arc-like-repressor	MERILYFTDDFSQENQAYAKQHGLIIRNAKAYGAVDYLEQCDKVCGQVPIAYEHLPRFELDDNVSDDDTKPKRTRKPKEE*	phrogs_hmm	hypothetical_protein	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0020	shell	direct	high	242	0.996	GCA_009378595.1_01152
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	214118	214468	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	20792	21142	GCA_009378595_1_17_202	GCA_009378595_1_17_202	+	219331	.	CDD:cd08053	Head-Tail-Connector-Protein	MLDDLPIDTPDKERVLMVVNAYLINKGVKFVGDVPEPIKQAGLELAHAFMNGELLAGRTEGVVTSKSSKAGDVSVSKTYADGADGQAMGQHEMIALALMQPYIKKSYGVNALVGRL*	hallmark_hmm	common_virus	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0021	shell	direct	high	350	0.997	GCA_009378595.1_01153
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	214465	214815	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	21139	21489	GCA_009378595_1_17_203	GCA_009378595_1_17_203	+	219331	.	PFAM:PF12206.7	head-closure-Hc1	MKQEITADIANAFDTDLKDTVKDFTAKRIILSDDDWAVNDTQVLSTINYSGRGVFTGFYAHEIDNKTIMQSDVKLICLQDELTEIPQIDDEINEMKIISISHDPAEVSFTIQLRGF*	phrogs_hmm	hypothetical_protein	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0022	persistent	direct	high	350	0.997	GCA_009378595.1_01154
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	214815	215162	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	21489	21836	GCA_009378595_1_17_204	GCA_009378595_1_17_204	+	219331	.	PFAM:PF04883.11	tail-component	MGIKWNKKLSIDPIADEIDKTYRKFAINCYNNVKTLSPVDTGRYRNAHHISVGAPSYSETGGGVELILGIPKHTYPIIYIQNNLPYALRLEHGWSQQAPTGVYGNAFNSAIANLG*	hallmark_hmm	common_virus	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0023	persistent	direct	high	347	0.997	GCA_009378595.1_01155
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	215159	215359	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	21833	22033	GCA_009378595_1_17_205	GCA_009378595_1_17_205	-	219331	.	PFAM:PF16777.4	transcriptional-regulator	MPKITSTPKTQTQIQKESNARRGVKNKAFTLKLDDIELIKSLSKRLNIPQNQLIMDAVRAYQRQLD*	phrogs_hmm	hypothetical_protein	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0024	shell	direct	high	200	0.995	GCA_009378595.1_01156
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	215739	216125	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	22413	22799	GCA_009378595_1_17_206	GCA_009378595_1_17_206	+	219331	.	PDB:2L25_A	tail-completion-protein	MNSFHIEQTLLTHIKSWEHFDDVPLAKENRNFKPPDGIWGRVTILGGVNQVRSISNTPNILQQGTLVIQLFCPQDLGTVAIKQKADSLAQYLKAKQLGRLELLAPSIINVPSNDGIYQINVSVPYRYY*	hallmark_hmm	common_virus	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0025	shell	direct	high	386	0.997	GCA_009378595.1_01157
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	216134	216652	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	22808	23326	GCA_009378595_1_17_207	GCA_009378595_1_17_207	+	219331	.	pfam11195	Protein of unknown function (DUF2829). This is a uncharacterized family of proteins found in bacteria and bacteriphages.	MKLITASVLTALLTSFVATRTVQATPLNRQEYNDLRGWQVPDNENPNDDGYLVVNAGVSERNVDGFDGYVSWLPKLAFEEQYKNDNLTFGQAVELLKGGKKVARKGWNGKGMYLLLATDIDFKTKANLSDMQNENGELTVPSITMKTADNKFAVGWLASQTDMLAEDWVVVQ*	mmseqs_cdd	common_virus	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0026	shell	direct	high	518	0.998	GCA_009378595.1_01158
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	216687	217595	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	23361	24269	GCA_009378595_1_17_208	GCA_009378595_1_17_208	+	219331	.	PDB:5NGJ_B	Tail-tube-protein	MSSGAFVKTAYAKQTGETLPKTGWKTLPNISNGLTVATELTNSEMLSGSRMAKAGMVTSASVQGDIETELMFGAYDELIAAAFWSEWSAGASPNTLSVGATKHQFAIAKDFSDINVNHVFTGCVVSSFGLTVDTSSLIKLKFGMTGLGYQESKTTSFAKTPTAQADTAKASGLSIGEIKVNGTKLDVCVESFSFELDNQTEVQKCLGDNIYGGNILAMLTNITGSMTIAYSQKAHEMISNQMTGATLSLELPIKFGNSKYVIKIPKFQVSGEIPSPSGTDLVTVDLSYTVVDESPVIEKHTA*	hallmark_hmm	common_virus	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0027	shell	direct	high	908	0.999	GCA_009378595.1_01159
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	217876	218337	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	24550	25011	GCA_009378595_1_17_209	GCA_009378595_1_17_209	+	219331	.	PFAM:PF08809.10	Tail-assembly-chaperone	MAFDLTLLKKDAKINAKREIEFDGLELTLEIQASEAFKRAAAEVQKIANTPKKVTKDSLKRGNQDEIGEYEAMLFILGEYCISQWNVTADGEPLAINGDNFLILLDQGFEKDKLTQFITLLFETYASLSQEFEDNKAKLVKKSMTATNGKKSG*	phrogs_hmm	hypothetical_protein	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0028	shell	direct	high	461	0.998	GCA_009378595.1_01161
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	CDS	218782	219054	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	25456	25728	GCA_009378595_1_17_210	GCA_009378595_1_17_210	+	219331	.	.	hypothetical protein	MIKPDAKEQGEFQITCHQATNQAMNYLHGLHAEIKRLGGVAPSLDIDEDEIARAIITRMVQGKRFMVNLDYWNNNLNVIMVDQKKLGGAE*	.	hypothetical_protein	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_CDS_0029	shell	direct	high	272	0.996	GCA_009378595.1_01162
GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote	cenote	CDS	2	232	GCA_009378595.1	RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595.1_RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595_1_2	GCA_009378595_1_2@C0	3	233	GCA_009378595_1_2_1	GCA_009378595_1_2_1	+	42762	.	PFAM:PF05100.11	minor-tail-protein-	FEGQKIPVRQITTYCNEAVCGRYRGEVCGYTGTARFTHDGKPTDDPTLDRCSGLLAHCKLRDNEGSFCGFPAAGLI*	hallmark_hmm	common_virus	C0	13802.0	0	13802	GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote	cenote	CDS	242	790	GCA_009378595.1	RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595.1_RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595_1_2	GCA_009378595_1_2@C0	243	791	GCA_009378595_1_2_2	GCA_009378595_1_2_2	+	42762	.	.	hypothetical protein	MNDHYPQLKGKTFKTWQELWQAMTDRDFDEVYGLHCECERKRALGHYRNRKLKQARNLICTLLYRQKLHEVKQPLILTKRRYAKPLPNPKNIDEIWQNLTDENYDEMYRLHCQYAKQQHNKDTKRASGLIWKFRQHCKLAGFDYPKKCVTKGFRQSKNHPWQKMIESDVQFYQNTHRQQRQN*	.	hypothetical_protein	C0	13802.0	0	13802	GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote_CDS_0002	cloud	direct	high	548	0.998	GCA_009378595.1_00060
GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote	cenote	CDS	744	1169	GCA_009378595.1	RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595.1_RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595_1_2	GCA_009378595_1_2@C0	745	1170	GCA_009378595_1_2_3	GCA_009378595_1_2_3	+	42762	.	.	hypothetical protein	MYNFIKTLTDSKDKTKLKTKEFAEVTTPLWLVQKQLDLIPSDERLNLNSKVLDPCTGDGRYLMMYLMNRLTAIKCPNDLYQAISTLHGIELQAVNVTRARHNLYLCTKFIAQSKNWAVDFDKVKKILAKNIWQGSFLNQFY*	.	hypothetical_protein	C0	13802.0	0	13802	GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote_CDS_0003	cloud	direct	high	425	0.998	GCA_009378595.1_00061
GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote	cenote	CDS	1181	1969	GCA_009378595.1	RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595.1_RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595_1_2	GCA_009378595_1_2@C0	1182	1970	GCA_009378595_1_2_4	GCA_009378595_1_2_4	+	42762	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MTLTKHTKRLIHAHAKICYPAECCGLIIDGQYYPCDNVAPNPAEHFEIDPIDMFEMQEYHGEIQAIVHSHPNGNAEPSEVDRVQMSIHGLDWVICAFGYHADGKEYFDVKRHKPKAYQAPLLGREYHHGVQDCYSLVRDYYNRELDIHLPDFHRRDGWWEDENHEPLYEKNFTKAGFIKVQDKNDLQKHDVILCRVGRTHHVNHALIYVGDGKLKSETTPDCVGNALILHHPHGSLSVREIYGDNWQRRTAMVVRHERLNNG*	mmseqs_cdd	common_virus	C0	13802.0	0	13802	GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote_CDS_0004	shell	direct	high	788	0.999	GCA_009378595.1_00062
GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote	cenote	CDS	2035	2628	GCA_009378595.1	RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595.1_RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595_1_2	GCA_009378595_1_2@C0	2036	2629	GCA_009378595_1_2_5	GCA_009378595_1_2_5	+	42762	.	PFAM:PF06805.11	tail-assembly-protein-I	MKTVILHGILAKKFGKSFRLDVKTAKEACHALACQIPAFYAFMMNAEKQGIKFAIFNGEKRTQKTNIGEKQVDDITTASHIHIMPRVIGSGGKTMGWLQVVAGWVLVGVGVVTGNAGLIAAGAGLMLGGVSSLLMPTPKLDPNNEDGNRPNNGFGGAITTVAQGNPVPILYGEREIGGFIVSAAIYAEDKMVQGVKI*	hallmark_hmm	common_virus	C0	13802.0	0	13802	GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote_CDS_0005	shell	direct	high	593	0.998	GCA_009378595.1_00063
GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote	cenote	CDS	2637	7493	GCA_009378595.1	RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595.1_RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595_1_2	GCA_009378595_1_2@C0	2638	7494	GCA_009378595_1_2_6	GCA_009378595_1_2_6	+	42762	.	PFAM:PF13550.5	tail-protein	MNIYGAKRQKQSSNKPYIQKDTASSTNSYQALYGLSEGEIYGLVDGGKSIRLDGTPIINDNGEPNFPDVSWDFRAGSIDQTHIKGFSSVENEQSVNVELRHDRPYTKAINNKQLSAVAIRLGFNSLREQKGNGDVVGYRIEYAIDVQTDGGAWEMVLNTAVDDKVSQGYQRSHRIDLPKAQQGWSVRVRRLTPNRDSETVSDTMVVSAVTEIIDAKLRYPCTALLALKYDAQTFSNIAKVSVHVRGMLIQVPTNYNPTARTYDGLWDGTFKLAYTNNPAWVFYDICTAKRYGLGDRLAGKVDKWSLYRLAQYCDEMVDDGKGGKEPRFTVNVYLQKADDAYRVLQNLASVFRALSFWDGTSIVVDADTPKEPVYVFSNANVIGGEFSYTGTRARDRHTIVKCAYDDPDNNFETDYIYVQDEHAIAKYGINQLELNLFGCTSKGQAQRAGIWALKSEQLETETVSFSTGLDGFIPKVGEIIHVQDNSRAGRMQAGRIVATDGRQITLDRMAGKVGDTLMVGDNSAQIVQIDDTVIATDTAIGRAGQVFAISSSDVAPRAYRVMTISQNDDASFSFTALQYEIGKFTATNNIAAIPKKEVSVIKAHVLTPPNSVGITERTRTHQGQAITTLVISWEQVVGAVAYIVEYKKDSNAWQTHKVSSHSLEIDGVYAGVYQAKVRAIDAFDNESLATSSQLTQITGKQGKPPRPINLSVQGVLFGMNLGWNFAKGSGDTNYTEIQVSPDGRSNIATLGTFAYPTNKHEITGLQGNLTQFYRARIVDKLGNTSDWTDWASGTTSANADKVLDILSGQISQSHLDQSLRTPIGKIGTIESNISKINVDLPDLNQSIADAQSTLNTAVASIDTEKKRLSSAIVDINTLKQSNNAKTQEIANLTQTVSGHTSQVRELGVTTGDLSQKYSQLKTTSDTANSEITTIKQTQSGQATSVERLRSEMANKASTSSVNSLSESLASKERALSRRINTVESSVSGNTSSINTLNQSLTTKEQALSRKQEQLTAQLANKASTSSVNSLSESLASKERALSRRINTVESSVSGNTSSINTLNQSLTTKEQALSRKQEQLTAQLANKASTSSVNSLSDSLATKERALTEQINRAKSEMGGRITQISNETRTLTDANRTIGERINQLNSELAGADSISDNLLINSNRTLVTGAYLIATYRISETLKNGDKVRLTVNAPQLGSRRIGFMAYNSNSASGSKLSDIRNRQGNSYTAEFEWNVGTGANNELWLYHNAENTRSVSTITSVSLQKITTSSGLASIKSSVANLERTLTTTNQSLAERINTVQTTLNGQTASIQQHAQSLNGLSAQWTLKVQSGGVVSGIGLASNNGVSDFAVRADKFYVASPQGNKKPMFSVITRPTTINGTTVPTGVYLNGDLLASGTISGDKIRANTQITAPNIRGGSINIGSNFSVDSQGNLNANSGVFRGQVFADKITGQIDVESLKSSAVALGYDMFISNSYHASSPSGFDKTFKASYPSHGSIIQSLGFNNENIGSAMYEMRVFCKRAITVKQKLHTVDDNLYCYVNGDSAFGYHSNYDYYDNEERVPTPFGRGRINTEISLSLRQGLNTIQFVLNNSGGGICQLIVLGDFIDNNIIKFA*	hallmark_hmm	common_virus	C0	13802.0	0	13802	GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote_CDS_0006	cloud	direct	high	4856	1.0	GCA_009378595.1_00064
GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote	cenote	CDS	7504	7878	GCA_009378595.1	RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595.1_RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595_1_2	GCA_009378595_1_2@C0	7505	7879	GCA_009378595_1_2_7	GCA_009378595_1_2_7	+	42762	.	.	hypothetical protein	MIDTQGLHAPFLISWFGVWLFAFLGGWASAFIKINEIDNRLQYPFIAKPLIGTVAGVAMAMIINGQAEPPAVSLAFWSFVGSICSTPIITGFLVFISDQKRQNELYKSAQNKFVPWSNKEKKDE*	.	hypothetical_protein	C0	13802.0	0	13802	GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote_CDS_0007	shell	direct	high	374	0.997	GCA_009378595.1_00065
GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote	cenote	CDS	7871	8197	GCA_009378595.1	RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595.1_RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595_1_2	GCA_009378595_1_2@C0	7872	8198	GCA_009378595_1_2_8	GCA_009378595_1_2_8	+	42762	.	.	hypothetical protein	MSNLLIINAVICSVGFFVGVHTFIKHLKAFSTEKTPVVEAWLVAVGMLAWSVVLYASFDEPVITRLEVFSRLLFLIYWVGGILKVQKQCIKIRRHLSKRKTKTNHYKP*	.	hypothetical_protein	C0	13802.0	0	13802	GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote_CDS_0008	shell	direct	high	326	0.997	GCA_009378595.1_00066
GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote	cenote	CDS	8222	8767	GCA_009378595.1	RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595.1_RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595_1_2	GCA_009378595_1_2@C0	8223	8768	GCA_009378595_1_2_9	GCA_009378595_1_2_9	+	42762	.	PFAM:PF08291.10	Peptidase-M15	MTSIKHIQTQIGTAADGIWGDKSKQALKSAINDGKIITITKNISLNELLASNTAKKYGIDNTPSQTILQNLIDASVNLYQPVREILGVPIIITSGYRSPALNKAVGGSKTSAHMSGFAIDFTAPKFGTPKLIVPHIVRKLKEKGIGFDQAIIEYPKSPRSWVHLGYKHPSGKQRGSSFVIG*	common_virus_hmm	common_virus	C0	13802.0	0	13802	GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote_CDS_0009	shell	direct	high	545	0.998	GCA_009378595.1_00067
GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote	cenote	CDS	8846	9022	GCA_009378595.1	RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595.1_RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595_1_2	GCA_009378595_1_2@C0	8847	9023	GCA_009378595_1_2_10	GCA_009378595_1_2_10	-	42762	.	.	hypothetical protein	MKNMQTLNQELKMAELERIKMEAEKLRAETLKIQKEATWFPWLSLAVALIALIVALVK*	.	hypothetical_protein	C0	13802.0	0	13802	GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote_CDS_0010	shell	direct	high	176	0.994	GCA_009378595.1_00068
GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote	cenote	CDS	9136	9753	GCA_009378595.1	RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595.1_RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595_1_2	GCA_009378595_1_2@C0	9137	9754	GCA_009378595_1_2_11	GCA_009378595_1_2_11	-	42762	.	PFAM:PF10078.8	transcriptional-repressor	MMFCATLSQTFNFAKIMTYKIIIDGATSQAITDKATAYANYRAVCRDYDNKPKKVELMHDDSELSTKAPNMMLLDNNDVFSANDVLCQAMQTLGINIKGLKDKIKTSELKLSNSRIDGWIRPSDDRHFVQMHNDELVAVLKLLLSDTVATIKSPENIVALRKKLGLTQSELAEKFGLKSGFRQVARWESGDQEMPDAKWKKMQDF*	phrogs_hmm	hypothetical_protein	C0	13802.0	0	13802	GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote_CDS_0011	shell	direct	high	617	0.998	GCA_009378595.1_00069
GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote	cenote	CDS	9750	10655	GCA_009378595.1	RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595.1_RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595_1_2	GCA_009378595_1_2@C0	9751	10656	GCA_009378595_1_2_12	GCA_009378595_1_2_12	-	42762	.	PDB:1Z19_B	Integrase	MPTFAQLYDKHFTYYATTVDASTASTYDKSMRKYVLPRLADMPIDEILPAHVLDLHAKIAKISPFTAHRSIQRINRIFDYAVTITGDLEYNKIARIGRYTAKPPTHGWRFVDLAHVPKMLKDIDKLKGVGDTIMRAFWVVVYTGLRRSEVVYARKDEFDLSNGLWTIPASRMKINSNGDHIVPLSEQAIKLIELLLHANTHSDYVFVSPHAGTEIISTWSLYQVLVKAGYQHKQTLHGFRKIFSTHAHTSRLWTIDAIELTLSHKIGGVRGVYNHANMLDERRELLQWWANEVDKWRGVKR*	common_virus_hmm	common_virus	C0	13802.0	0	13802	GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote_CDS_0012	cloud	direct	high	905	0.999	GCA_009378595.1_00070
GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote	cenote	CDS	10715	11089	GCA_009378595.1	RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595.1_RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595_1_2	GCA_009378595_1_2@C0	10716	11090	GCA_009378595_1_2_13	GCA_009378595_1_2_13	-	42762	.	7ECV_J	inhibitor, complex, IMMUNE SYSTEM, IMMUNE	MKIQDMKAIQENRQNLTAFLHITEIKVINALLADGVDVNHMNFEQICNTTLEQYQAKKISNLKAARIFEILAHSNRDFKIEKFRCSHGYNEIYKYSPAHGAYLFYCKGGQRQLNALIAENGKYI*	hhsuite_tools	nonviral_gene	C0	13802.0	0	13802	GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote_CDS_0013	cloud	direct	high	374	0.997	GCA_009378595.1_00071
GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote	cenote	CDS	11236	12429	GCA_009378595.1	RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595.1_RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595_1_2	GCA_009378595_1_2@C0	11237	12430	GCA_009378595_1_2_14	GCA_009378595_1_2_14	-	42762	.	PDB:1Z19_B	Integrase	MLTEVWLKANNGKPRDKVTEIADRDGMSVRISPKGKIVFQLRYRFNGKLKRFDLGVYPLISLKQAREKSLSAKTQLLHGKDPKLEEQIAKQAYINADTFYECFLEWYDKSAVITKKQASDIKRSFELYVFPVIGSLPINDITLQQYIIIIESISEKTPGIAERILTNTKQMLKWAKKREIVTHNILADLELSDFNLVRVKRKRYLSDDEIILFYKALYGSKISYRNRLATELALMFGCRGIELRRAKITDFQDSVWTVPPENHKVGHITQQPLIRPILPPMQALIDEAIAISRSEYLFDRRGEMLEKNAFLDITTGLIHWIDRHCGVQLPRFTFHDLRRTARTNFSAFTSRDIAEIMIGHTVGNMQQVYDHYNYLPQQTAAYEQWLKKLAELKQIAL*	common_virus_hmm	common_virus	C0	13802.0	0	13802	GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote_CDS_0014	shell	direct	high	1193	0.999	GCA_009378595.1_00072
GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote	cenote	CDS	12655	13137	GCA_009378595.1	RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595.1_RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595_1_2	GCA_009378595_1_2@C0	12656	13138	GCA_009378595_1_2_15	GCA_009378595_1_2_15	-	42762	.	COG1607	Acyl-CoA hydrolase [Lipid transport and metabolism]. 	MSGFCTLNIASTDLTMTVLMTPDMANFSGNVHGGTILKLLDQVAYACASRYAGGYVVTLSVDQVIFKEPIYVGELVTFLARINHVGTTSMEVGIRVEAENIQTRTARHTNSCYFSMVAVDQAGKPVPVPPLVVDDSLAKQRYEMAKKRKELRIKLQQHDW*	mmseqs_cdd	nonviral_gene	C0	13802.0	0	13802	GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote_CDS_0015	persistent	direct	high	482	0.998	GCA_009378595.1_00073
GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote	cenote	CDS	13160	13480	GCA_009378595.1	RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595.1_RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595_1_2	GCA_009378595_1_2@C0	13161	13481	GCA_009378595_1_2_16	GCA_009378595_1_2_16	-	42762	.	pfam04358	DsrC like protein. Family member DsvC has been observed to co-purify with Desulfovibrio vulgaris dissimilatory sulfite reductase, and many members of this family are annotated as the third (gamma) subunit of dissimilatory sulphite reductase. However, this protein appears to be only loosely associated to the sulfite reductase, which suggests that DsrC may not be an integral part of the dissimilatory sulphite reductase. Members of this family are found in organisms such as E. coli and H. influenzae which do not contain dissimilatory sulphite reductases but can synthesize assimilatory sirohaem sulphite and nitrite reductases. It is speculated that DsrC may be involved in the assembly, folding or stabilisation of sirohaem proteins. The strictly conserved cysteine in the C-terminus suggests that DsrC may have a catalytic function in the metabolism of sulphur compounds.	MNHLPSLDDDGHLKNHTDWTPKIAQRLADTIGVTLESEHYQIIGEVRVFFETYHHSPSTRPLIKYLMASLPNLDISNQKLQKLFNTGLVARHVNRIAGLPKPPNCL*	mmseqs_cdd	nonviral_gene	C0	13802.0	0	13802	GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote_CDS_0016	persistent	direct	high	320	0.997	GCA_009378595.1_00074
GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote	cenote	CDS	13496	13801	GCA_009378595.1	RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595.1_RCJR01000011.1	GCA_009378595.1|RCJR01000011.1	GCA_009378595_1_2	GCA_009378595_1_2@C0	13497	13802	GCA_009378595_1_2_17	GCA_009378595_1_2_17	-	42762	.	.	hypothetical protein	MKFLIHINTDSELISYEAIALALTLATFDHDIQIELGENVLVLLNNPKSRIYGMIQSLALYDLPKAYHNFQAVNALDKVIQLSLQSGSLALDDYDSKLYFQ*	.	hypothetical_protein	C0	13802.0	0	13802	GCA_009378595.1|RCJR01000011.1@region_1_13802@tool_cenote_CDS_0017	persistent	direct	high	305	0.997	GCA_009378595.1_00075
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	69003	69200	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	1	198	GCA_009378595_1_23_64	GCA_009378595_1_23_64	-	90401	.	NF033499	excisionase Xis. Members of this family are excisionases such as Xis from the Gifsy-1 prophage of Salmonella enterica subsp. enterica serovar Typhimurium str. LT2.	MKKYLTSNEICEIFGICKMTLNRWEKRYPHGEPFPRPVMGGGLGGGVKRYLSQEVHTWELKHTAK*	mmseqs_cdd	nonviral_gene	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0001	shell	direct	high	197	0.995	GCA_009378595.1_01853
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	69263	69364	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	261	362	GCA_009378595_1_23_65	GCA_009378595_1_23_65	-	90401	.	.	hypothetical protein	MIKQTTLCGDMLYRSISRLGKSLRRLKNEQILH*	.	hypothetical_protein	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0002	.	unmatched_CDS	none	0	0	.
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	69366	69818	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	364	816	GCA_009378595_1_23_66	GCA_009378595_1_23_66	-	90401	.	cd22268	double-psi beta-barrel fold of endolytic peptidoglycan transglycosylase RlpA and similar proteins. Endolytic peptidoglycan transglycosylase RlpA (rare lipoprotein A, RlpA) is a lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. It adopts a double-psi beta-barrel (DPBB) fold and is one of four SPOR-domain containing proteins in Escherichia coli (including FtsN, DedA and DamX) that bind peptidoglycan (PG) and are targeted to the septum during division. It directly interacts with the divisome protein FtsK in vitro, and deletion of the rlpA gene partially bypasses the requirement for functional FtsK, a large, multi-spanning membrane protein that facilitates double-stranded DNA translocation during division and sporulation in E. coli and Bacillus subtilis, respectively. In Pseudomonas aeruginosa, RlpA contributes to rod shape maintenance and daughter cell separation. The separation of daughter cells requires extensive PG remodeling. It has been suggested that amidases and RlpA work in tandem to degrade PG in the division septum and lateral wall to facilitate daughter cell separation.	MTQNQQILDYLMAGNTITPLEALERFGCFSLAARVYELKNTHGKIILLLILVASQAQAHTATWYGGKFHGRLTASGERYNQNAFTCASNKYKFGTRLKVINKANGKSVICRVNDRGGFGKYGTTLDLSKGAFKKIAPLSQGKIKVTIRRL*	mmseqs_cdd	nonviral_gene	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0003	cloud	direct	high	452	0.998	GCA_009378595.1_01854
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	69815	70042	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	813	1040	GCA_009378595_1_23_67	GCA_009378595_1_23_67	-	90401	.	COG3311	Predicted DNA-binding transcriptional regulator AlpA [Transcription, Mobilome: prophages, transposons]. 	MTTKSQQPHTLLPTQGMSRAKDILPLLPFGKSTLWQKVKSGKFPQPVRLGKNCTAWRNQDIHDWLADPIAWEQNQ*	mmseqs_cdd	nonviral_gene	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0004	shell	direct	high	227	0.996	GCA_009378595.1_01855
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	70042	71025	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	1040	2023	GCA_009378595_1_23_68	GCA_009378595_1_23_68	-	90401	.	PFAM:PF03837.13	RecT-protein	MNELTTTQNQIVLDDGLFNKCHRLAEIMASGSCTIPKHLQGKVGDCFAIIGQSIRWGMDPYAVAQKTHLVNGTLGYEAQLVIAVINAKAPIVGRLKFDYFGDWSKVKSKDDKSDDVGVVVSAIIQGDTEPTTLSISMAQVGSVRNSPLWTADPRQQLAYLGAKRWARLHCPDVILGVYTPDELADTAREPKPINATVTDINAMVNQAVAQVNAPTQQAQIEQVDTAKLAKQIVTADTADALDDLAKAIAHHRQTGAINDDERTILGNAFKARKLYLTMRDDITQVTLDEAENARRVLYDNHAKLSPDDFESLDNQLDYHLNQLMEQQ*	common_virus_hmm	common_virus	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0005	cloud	direct	high	983	0.999	GCA_009378595.1_01856
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	71190	71306	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	2188	2304	GCA_009378595_1_23_69	GCA_009378595_1_23_69	-	90401	.	.	hypothetical protein	MYSTNKKHLKQQYIDHLKRQLNISQRMIDELKNANHAM*	.	hypothetical_protein	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0006	.	unmatched_CDS	none	0	0	.
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	71316	72125	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	2314	3123	GCA_009378595_1_23_70	GCA_009378595_1_23_70	-	90401	.	PDB:3H4R_A	Exonuclease	MSNLIHNLSNADYHAHPAVSSSQLKHMLRTPAHFKASLETSKEPSDAMKLGSLVHTLLLEPHLVDYEYTVMPKFDRRTKQGKADYEAWLERNAHKSIITADQMDTATAMTDSLKQSSVAKLLKVNRTLIEASIFYTDQDTGIDCRVRPDFLITPCDSFPNGLIVDLKTTDNASPSAFKRTITNFGYHLSAAMYLDGYEAHFGTCPAYIWLVAERDAPYAVASYTPSDEMLERGKQDLDSALSMLRQCMDADDYPAYSADIATIDLPKWA*	common_virus_hmm	common_virus	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0007	shell	direct	high	809	0.999	GCA_009378595.1_01857
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	72122	72388	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	3120	3386	GCA_009378595_1_23_71	GCA_009378595_1_23_71	-	90401	.	.	hypothetical protein	MSKLRKRYINRGIVNFTVVYSISRDATKIIHAIFMYLECGNPPREVCCNRKEIREYCTKLLNLQDFVFFQDFCPHLFKEFEQDKGAIA*	.	hypothetical_protein	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0008	shell	direct	high	266	0.996	GCA_009378595.1_01858
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	72385	72546	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	3383	3544	GCA_009378595_1_23_72	GCA_009378595_1_23_72	-	90401	.	.	hypothetical protein	MRSTIQTVIFIVIMMFMLKGCLYAFDHECKIQEELGRQYYEESIHLQRENPNP*	.	hypothetical_protein	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0009	shell	direct	high	161	0.994	GCA_009378595.1_01859
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	72883	73164	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	3881	4162	GCA_009378595_1_23_73	GCA_009378595_1_23_73	+	90401	.	.	hypothetical protein	MFDIAVEMMNKPIPFWLCLLLYCIGGWVFYQMGRNKERKQQGRIATLDQHAQKAVDKTILMVKRDMTVDLSQLTNYVLVVKKDRATLLNLDSI*	.	hypothetical_protein	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0010	cloud	direct	high	281	0.996	GCA_009378595.1_01860
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	73460	73933	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	4458	4931	GCA_009378595_1_23_74	GCA_009378595_1_23_74	-	90401	.	.	hypothetical protein	MFLDRAFQLELLATLSKIYPNHYNFNKQYPSDSTNYHKALANIYYLKEHGLITAESILDRAYLGGECVYHLSTGRITKDGLDLLADDGGLKAILNTITVKFDAAQMARLLLSFDQLGHKDKQSLLHTLKNAPQTTLDHLIGKAVNMGWDFVLGTALP*	.	hypothetical_protein	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0011	cloud	direct	high	473	0.998	GCA_009378595.1_01861
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	73949	74416	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	4947	5414	GCA_009378595_1_23_75	GCA_009378595_1_23_75	-	90401	.	4XZF_A	Helicase-like transcription factor/DNA	MAHIESRGFNQQVVGEQHYTRALKKCYNSSNSERIDERSVSIPVLLHLENNNRYDKNAVAVMSEFGIIGYLSRDDAIAYRELYGEDEEHTTIAKIYTRTGEIFSAYLSLTITEHTSQRVLERNTPNHDSFTPKPKKPKASKDPNKKGFFARLFGI*	hhsuite_tools	hypothetical_protein	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0012	cloud	direct	high	467	0.998	GCA_009378595.1_01862
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	74472	75173	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	5470	6171	GCA_009378595_1_23_76	GCA_009378595_1_23_76	-	90401	.	PDB:2FJR_A	Repressor-protein-CI	MELKDRLKYARKAKGLTQKQVTEQIKGLSQSAYSQLESGKSKSTTRAIELAHLFGVDVHWLISGEGEMTKNNDKLTPITEWDDSTPLDDDEAEIPFYKDIAFACGHGAVNDDVTHETRKLRMGKRTLSNLGVMPENAFAVTARDDSMTPYVQDGDTIYIDKGRKEVKDGRIFAIRFGELCLCKRLYRLPDGGVRIVSDNSDEFPEQIATKQQISNGEFEVLGWVWSVSRLERW*	common_virus_hmm	common_virus	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0013	shell	direct	high	701	0.999	GCA_009378595.1_01863
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	75316	75546	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	6314	6544	GCA_009378595_1_23_77	GCA_009378595_1_23_77	+	90401	.	COG4197	DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily [Transcription]. 	MSKTKNKAVQRLIEFFGSQMKLADALDVEQSSVSGWLNNRFYISRDNADLAESLTNGVVRSEELRPRKKAKTPRSN*	mmseqs_cdd	nonviral_gene	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0014	shell	direct	high	230	0.996	GCA_009378595.1_01864
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	75586	75987	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	6584	6985	GCA_009378595_1_23_78	GCA_009378595_1_23_78	+	90401	.	.	hypothetical protein	MNEFIIPNFNFVSNAFSKRRTDFDAQEREIAEFIKKGGKVINLNKEQTKKMVCKAHACRQYNPNAKIRLLLSHLQKTGEHMTSAQIKKQFGIKAAGSAVSRFNQREGKTLIKNKKLRDSTNHIYCVYYAAEVN*	.	hypothetical_protein	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0015	shell	direct	high	401	0.998	GCA_009378595.1_01865
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	75987	76814	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	6985	7812	GCA_009378595_1_23_79	GCA_009378595_1_23_79	+	90401	.	COG3756	Uncharacterized conserved protein YdaU, DUF1376 family [Function unknown]. 	MHYYSHNINDFNNATIHLSVEEECMYHRALAWYYSNELPLPSDKNKIYRYLRATTKKLQKAVDMVLEDFFILEDDGYHQARCDEEIAEYKKKQEVASNAGKASANARKKKAEQDENNQQANDEHHINDRSTTVQQEINDRSTTVQPTNNHKPITNNIYTHTNAREQNFCSLADWQPPPMQEMQSELLRAGVNVTLNASQYQITLQDFKAYYDNQATLGKPLNTDFVRRQKFRQWLSRSDSKKPTNRTDELAAMANNFGENFYSKNANPKLGVTHE*	mmseqs_cdd	nonviral_gene	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0016	shell	direct	high	827	0.999	GCA_009378595.1_01866
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	76819	77421	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	7817	8419	GCA_009378595_1_23_80	GCA_009378595_1_23_80	+	90401	.	.	hypothetical protein	MIQIHSPSHLVAVIQGLAVGSFEKRYGAMKTADVVNIFAFVTQDLTPEQLVVGINTMANKGFCPDAALFRRWCLGLASFSHDDTISDSYRGKSGALGNILKWIAHPKNTVITVAEKQAYDATYHLWQDIKSEHDKWRAENAFKDEYELIVNRFVKDGITCQVYTPPPAIENKPNDEHWPVSKDRQDEIFATLGKITGRLV*	.	hypothetical_protein	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0017	shell	direct	high	602	0.998	GCA_009378595.1_01867
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	77524	77916	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	8522	8914	GCA_009378595_1_23_81	GCA_009378595_1_23_81	+	90401	.	PFAM:PF06356.10	Endonuclease	MMRPDEHALFTKFTGIKFVKYKNKKTQIDGITFDSKKEAERYKVLKSMQADGLINDLECQPKFILIPSQYFETIGRRERGVDYVADFRYKDNLGQIIVEDVKSAITAKDKVYRIKRKMVKYFHDVEIVEV*	common_virus_hmm	common_virus	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0018	shell	direct	high	392	0.997	GCA_009378595.1_01868
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	77913	78149	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	8911	9147	GCA_009378595_1_23_82	GCA_009378595_1_23_82	+	90401	.	PFAM:PF11753.7	nucelotide-kinase	MNELKQTENDAVNHPKHYTSDPSGIECIQITRHRNFNIGNAIKYLWRAGLKDGNSDIQDLQKAVWYIQDEIKRIKGAV*	common_virus_hmm	common_virus	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0019	shell	direct	high	236	0.996	GCA_009378595.1_01869
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	78146	78517	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	9144	9515	GCA_009378595_1_23_83	GCA_009378595_1_23_83	+	90401	.	PFAM:PF06530.11	anti-termination-protein-Q-like	MNEYREWGKWVRDNPDCLKTKSTWLMVERSKLPANRRVYVMTDDRGLQIDRGVSELARYCSVSANVFMMFYVWGWSHEKIAVRYLSAIGYRGKSRASRHDVRSALIKAESFLAGLLHKLYSFT*	phrogs_hmm	hypothetical_protein	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0020	shell	direct	high	371	0.997	GCA_009378595.1_01870
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	79071	79526	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	10069	10524	GCA_009378595_1_23_84	GCA_009378595_1_23_84	+	90401	.	PFAM:PF05119.11	Small-Terminase	MKGRKPKPTAIKELTGNPGKRALNKNEPKFAQITEIEPPVWMTGTAVTMWCTVMPELLATGVLTVADVHNVEAFCMSYSRWREAEQEVERYGLVIMDDNGKLNKNPALTIINEAKTQMMKFGSLLGLDPSSRTRLTGAANSEPIANPFADL*	hallmark_hmm	common_virus	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0021	shell	direct	high	455	0.998	GCA_009378595.1_01871
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	79523	81217	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	10521	12215	GCA_009378595_1_23_85	GCA_009378595_1_23_85	+	90401	.	PFAM:PF03354.14	Large-Terminase	MTYPNVQKALDYIHAVLSGEIIANKYIKLACQKHLDELKNSETNPDYPYFFDPAKAEKVAKFIQLLPHTKGKWASKGEKIALESWQIFACCLPFGWIKRATGFRRYTKILIFVCRKNGKSAIAAGIGNYMFCADGEFGAEVYSGATTEKQAWEVFRPAKIMVERTKALKDFYGIEVNASNMARLADGSRFEPIIGKPGDGSSPSCAIIDEYHEHKNNDLYDTMETGMGAREQPIMLVITTAGSSIGGACHQMVRDAEKMLDGVMDIPDLWAVLYGMDKDDDWTSEIALKKANPNMDISVSAEFLQARQRDAKMSAAKQAIFRTKHLNEWVGAKNAWLNMAKWANAPERLPLSALTGRPCFIGLDLATKIDMVALILLFPPTADDLNYHVHGRYYLPDVRVLEELDSNTERYRAWDADSLLTLTMGEVVDFDAIKDDLREFYGRFDVQEVAYDPWQATQLAQEMEKEGMVMVELRHTVQNMSEPMKELEALVLQKRLAHGDCPILTWQASNVVATLDKKDNIYPNKERAENKIDGMVALIMALSRAIVHTDTGNVDEFFDNMIIA*	hallmark_hmm	common_virus	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0022	shell	direct	high	1694	0.999	GCA_009378595.1_01872
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	81298	81747	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	12296	12745	GCA_009378595_1_23_86	GCA_009378595_1_23_86	+	90401	.	PDB:1G60_B	Adenine-specific-DNA-methyltransferase	MDIQLQQGDCLELLKTLPDNSVDMVLTDPPYGVLDFKWDNEIDNEKLWQELKRVIKPNCIIALFGIEPFSTQVRLSNIKNYKYDWYWKKSAVGGFINAKKRPLKTLENIMVFSDGVPRYYPQGLVRLDKKSPERQRGSQREAGEGRCVV*	common_virus_hmm	common_virus	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0023	shell	direct	high	449	0.998	GCA_009378595.1_01873
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	81740	82060	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	12738	13058	GCA_009378595_1_23_87	GCA_009378595_1_23_87	+	90401	.	PDB:1Z6A_A	Helicase-of-the-snf2-family	MYSCNSKASEYIQEFTNYPRHILEFGNSNSTERGLHPTQKPVDLLEYLIKTYTNKGETVLDFTMGSGSTGVACVNTGRKFIGFELDDYYFGVACDRINRHRVLKDE*	rep_hall_hmm	common_virus	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0024	cloud	direct	high	320	0.997	GCA_009378595.1_01874
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	82053	83264	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	13051	14262	GCA_009378595_1_23_88	GCA_009378595_1_23_88	+	90401	.	PDB:8CEZ_K	Portal-Protein	MNDENWWSRFYARLFGGGKRLDKGSEVAPFNSMHMPSGTAVTAETALKLSAVWACVRLRSQTIASLPLHLKSDSKELATDHHLYRILHDSPNADMTASEFWESVIVSLDLWGNAYVYITRLGGRVVSLDILDPSITVVKRNRDGDISYKVGEDIFGAEDVLHIKGFTMDGLVGLSPIRYQAGVMGAQIDANNAASHTFGNNLKAGGFLQTDNILNSEQRQKLRGNLEYFSKPENAGKYMVLEAGMSVSSSGVKMNPSDAQLLETRYFGIEEICRAFGVPPQLIGHTDKASSWASSLEGMNLGFLTYSLRPTLERIEQAIRKKLLSPSERSQYSPKFSVEGLLRADSQGRANFYTTMLQNGVMTRNEVRALEDLPPMSGGDSLTVQLNLTPLEKLGQDHENQIN*	hallmark_hmm	common_virus	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0025	shell	direct	high	1211	0.999	GCA_009378595.1_01875
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	83245	83895	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	14243	14893	GCA_009378595_1_23_89	GCA_009378595_1_23_89	+	90401	.	PFAM:PF04586.16	prohead-serine-protease	MKTKSINFEPSIVKDDGFFSGYCNVFDVVDSYGDSVQKGAFVKSLAKFETRSKMPPILWQHDRAQPIGVWTALKEDEHGLYGEGKLLIDDVPKAREAHALIKAGVIDGLSIGYRVEQADYDNTKEVLLLKELDLFEISVVTFPANDASTVTVVKSALAQGQLPTLSEFEKFLRDAGFSKSQATAIASHGLRQLLGEPAELKDALQIIKSITGDINV*	hallmark_hmm	common_virus	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0026	shell	direct	high	650	0.998	GCA_009378595.1_01876
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	83888	85069	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	14886	16067	GCA_009378595_1_23_90	GCA_009378595_1_23_90	+	90401	.	PDB:3QPR_G	Major-Capsid-Protein	MSDMTKQLATELAKATDYVKGLGEELTGRLEKGENNLSTLKGDVDEALKSMGDVKARLDAIEQKQARRAQNQEPEKSLGERLFESDAFKQFADNPTAGNRAKLNIKATITSATTDTSGAAGALVQTQRLGGIVAPPDQRLRVRDLLMKGTTDSNALEYVRETGFTNSAAAQQNEGDKKAQSHIKFDTQSVSVRTLAHYVKASRQILDDASALASYINGRLIYGLKLVEDRQLLNGDGENGNLKGIIPQATAFADKATLSTYTIIDQLRLAQLQAVLAEYPASGIVLNPIDWAKIELEKDADNRHIIGLPQGTANRTLWGVPVVETTAMGTGKFLTGAFNLGAQIFDRQQAAIAVATENEDDFVRNLVTILCEERLALAVYRPEAFIYGDLVAK*	hallmark_hmm	common_virus	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0027	shell	direct	high	1181	0.999	GCA_009378595.1_01877
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	85301	85534	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	16299	16532	GCA_009378595_1_23_91	GCA_009378595_1_23_91	+	90401	.	.	hypothetical protein	MEYEVLKQHYGDKQYYEGDIRQLDDDFTAKRLIEFGLIGKAELNKKVQSKAKKVPSNKAEPVLENKGDDSDDTEDNA*	.	hypothetical_protein	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0028	shell	direct	high	233	0.996	GCA_009378595.1_01878
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	85512	85799	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	16510	16797	GCA_009378595_1_23_92	GCA_009378595_1_23_92	+	90401	.	PFAM:3JVO_G	Head-Tail-Connector-protein	MTQKITLEMVKHQCRIDHDDEDDLLMHYLNAALIHASNYIDGLLDESNLAVQQAVLLLVGHWYDNREAVNNDYQTPQSIPFGFEALLQPYRNLGV*	hallmark_hmm	common_virus	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0029	shell	direct	high	287	0.997	GCA_009378595.1_01879
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	85799	86125	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	16797	17123	GCA_009378595_1_23_93	GCA_009378595_1_23_93	+	90401	.	PDB:2KZ4_A	Head-tail-adaptor	MQAGKLKDRVSFMQHLELRSATGAPKRTWSVIDTVWGQFTPVSAKDVIAGKAAGVEILARLKIRYRDDIKRNMRVVCRGKTYDIIGEPLADNKSGREYLTLLLQGAEQ*	hallmark_hmm	common_virus	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0030	shell	direct	high	326	0.997	GCA_009378595.1_01880
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	86122	86664	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	17120	17662	GCA_009378595_1_23_94	GCA_009378595_1_23_94	+	90401	.	PFAM:PF04883.11	tail-component	MKLIGAEELGKKLKQAREEITNKQAGSALYSSLMYASLPMYKYVRSQAPMTKAPYRRYMSYGQGDGFYYDKNGKKRRRRAKRGTGKYEIQESGLYHKSIKRRRLTRGESANLDGAAIAIYVAEGSGKTHGSAYYWFFNEYGTKYQAARPIFRPAFNSGAEDAADRFKNKLGERIDKIMGG*	hallmark_hmm	common_virus	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0031	shell	direct	high	542	0.998	GCA_009378595.1_01881
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	86664	87011	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	17662	18009	GCA_009378595_1_23_95	GCA_009378595_1_23_95	+	90401	.	PFAM:PF05657.10	tail-component	MIASKRIFGLLGELVNDRVYPLFVPETADSTPPFMVYTLVSNVPDNTLDGATGHEWVGVQIDIYAADYDETIALAQEAVKRLNTIKPSEYGGVVYVHDDGLYRAIIEYEFWQTII*	hallmark_hmm	common_virus	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0032	shell	direct	high	347	0.997	GCA_009378595.1_01882
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	87021	87467	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	18019	18465	GCA_009378595_1_23_96	GCA_009378595_1_23_96	+	90401	.	PFAM:PF16461.4	tail-tube-protein	MAETNTVENAKDSFYQLFVSATNTSSSFKKIERLTSCGVPSEAKVLDDITATDDRRQVNAVVDYKENSEVEFEYVLLPEDETHKLLQKSFESGRELYFQLKFMEATSESRQFKGIIAELTTDAEDTKKKLRKKGRITITGDTTKELTA*	hallmark_hmm	common_virus	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0033	shell	direct	high	446	0.998	GCA_009378595.1_01883
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	87516	87845	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	18514	18843	GCA_009378595_1_23_97	GCA_009378595_1_23_97	+	90401	.	CDD:pfam16459	Tail-assembly-chaperone	MSNLKNDLLKALSNLGTPTAYDIDGIGTVYIKKLTVEEQGKLMHDKGDDVKSSLRLVTFSVCDEEGKRVFAENDIKDLGKMHADTLTKLIEAIREVNGFDAKVDDLKKD*	hallmark_hmm	common_virus	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0034	shell	direct	high	329	0.997	GCA_009378595.1_01884
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	87896	88168	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	18894	19166	GCA_009378595_1_23_98	GCA_009378595_1_23_98	+	90401	.	PFAM:PF06223.11	tail-protein	MTVAELASKMSYVEFLEWQAFHDIDPIGGYRGDIQAAMIAASMGGGKLSDYMIIDPNPMTDEQRQEYEQQREAQKARIQVAEMIAMFNSM*	phrogs_hmm	hypothetical_protein	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0035	shell	direct	high	272	0.996	GCA_009378595.1_01885
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	88416	89054	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	19414	20052	GCA_009378595_1_23_99	GCA_009378595_1_23_99	+	90401	.	.	hypothetical protein	MKKLLKWFGIIFAVFLGIGALAVALETPEQKAEREAQAAEEKAQREAEYAAQIDDKEEVQPVNLGMTPQELGSGIDNIIKEISGVDPQLRSVSTNDNIYSVNLGEDIIWYGDLDKTGNIITSMYNVKISDNVEDRMMALLAFAIAKARTLSPDLPKEQVANSVAEVMSRAMKKFNQSLKPTTETQVIGDYKYIVNIYPDSKSMRFSVVHKDH*	.	hypothetical_protein	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0036	shell	direct	high	638	0.998	GCA_009378595.1_01886
GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote	cenote	CDS	89346	90224	GCA_009378595.1	RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595.1_RCJR01000009.1	GCA_009378595.1|RCJR01000009.1	GCA_009378595_1_23	GCA_009378595_1_23@C2	20344	21222	GCA_009378595_1_23_100	GCA_009378595_1_23_100	+	90401	.	PFAM:PF10547.8	P22_AR-protein	MSNISIFNFESTKQVRTAIRNGGDIWFCLPDVANILAISNANPSRFNLSEAGVHKMYISYESGKKQVTFINEPNLYRVIFRSNKAEAVKFQNWVFDEVLPAIRKTGRYVAKSTVSDRTPLRQAVSMLVSRCGLDYGTAYTMVNQYMETQHIDEIDLADLPRAIAYTHSLMIKPDAKEQGEFQITCHQATNQAMNYLYGLHAEIKRLGGVAPSLDIDEDEIARAIITRMVQGKRFMVNLDYWNTKPNVSIIDQKSWVVQSDDIAKIIADPAGVPKDVLPSIIQAALKRSGLTV*	common_virus_hmm	common_virus	C2	21399.0	69003	90402	GCA_009378595.1|RCJR01000009.1@region_69004_90402@tool_cenote_CDS_0037	shell	direct	high	878	0.999	GCA_009378595.1_01888
GCA_009378595.1|RCJR01000016.1@region_1_5322@tool_cenote	cenote	CDS	2	181	GCA_009378595.1	RCJR01000016.1	GCA_009378595.1|RCJR01000016.1	GCA_009378595.1_RCJR01000016.1	GCA_009378595.1|RCJR01000016.1	GCA_009378595_1_7	GCA_009378595_1_7	3	182	GCA_009378595_1_7_1	GCA_009378595_1_7_1	+	5322	.	.	hypothetical protein	VLDAIPNDDMNIDMTTGSFGDVILELSQSLKETMGRNTSSYGITPIAIFRVIRTNQQAK*	.	hypothetical_protein	NaN	.	0	5322	GCA_009378595.1|RCJR01000016.1@region_1_5322@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_009378595.1|RCJR01000016.1@region_1_5322@tool_cenote	cenote	CDS	214	4101	GCA_009378595.1	RCJR01000016.1	GCA_009378595.1|RCJR01000016.1	GCA_009378595.1_RCJR01000016.1	GCA_009378595.1|RCJR01000016.1	GCA_009378595_1_7	GCA_009378595_1_7	215	4102	GCA_009378595_1_7_2	GCA_009378595_1_7_2	+	5322	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MGGFLLGEFMSNTYRLDIQVNADSANTALGNLKEHFDKIEQSSGKAGVGIDGFSDKADKASKSSKKAGDEAKKAGDGAKKFGDDAKKAGNDIDGLKHKADGLKTAFGTLKGVMFTALAVAGVGGIIATADDMQTLTSQIKIATTSTKDYAHAMSEIERIAMGNMVSLDSVGQLYASNERSLKQLGKSQDEVIKFTENITTAMRVSGGSAESQAAALTQLGQAMASGVLRGDEFNSVAEQAPVIMELMADSLGVTTGKLRDMAKEGKLTSKVVYDALAGASASDKLAEKSKKMSTTISGAMQNIQTQWRLGVDAIMNGEGGLSSVLADGINSIALGASSFVDSLPAINQAITDTIAKAKEMGTAFLESDFGQSAIQTAKDAFEQLKSAMQGVVDIAGDVKAFFEKNPELAIALASGVGAVAGAFLLFKGVLIVWAGVATLATVAGGALAAVMAVLTSPITLVIAAFAALVAAGVYVYRNWDTIKQKANHAWQSIKETWQGVGEWFGELWDKVKQTFFDWLSQMPKPVQDMVANIGEIFSTIVNVAGAVWDGIANIAKSVWHAITEFVSYAIDKIKPVIKSVLEFFKNAWDGLVSIAKTVWQAVVSVVSHVFDKISGIISTQFEAMKAIFMAGVTIFASIFNAGFEMVKTIFSTAFKVIKAVLTGDMQGVKDAIKDGFQKAVDILKKLVGNIVDALKKLGKDLLQVGRDAMQGFINGISEKIDAAVSKAKEMASSVKNAITGFFDIHSPSRVMKQVGGWISEGLAIGIAYKAPIAAKEAKNLAKSVKNALESDLQKTAEEIFLTKQHIKGNPYAQLTKDIAFGKYGKQDTSRLQKLAQEQILQSNILTLTQQLHEAQQNLANVGLTSIEIMQRQYDETDKSVRASLDLFEQVKKTSQELIDATNRHEATQAFESTLKDIKKQMAIMGSQDPLAEFLYDLQNADKYAYYTTEQLATLKDEMIKLQNAKDAKQASDGIKESLKDINKQLALLGSNHPLDDFFYELEQTDKYAHATTDEINELTDAIFKLQDAKDKLNAKQAFDKLMKDTALANETPAQRLQREYDEKMAVIDRYEQMHSDKLGDATSLRQQITERYEQAEKDAKVKNYQEHLTAFAGFLKNTAGEQSKAYRVMFAASKAYALADVGVKMGKAVADAWADPSAVTIWQKLANVAKVSLEQGHVLSMINAISPKGFATGGYTGNMGINQVAGVVHGQEYVLNAKATKRIGVGNLERLNRGDGIGGHVNHINVHVTVNSDGSNVQADTQMGKTMGEAMAKIARQVVIQESKQNGHLDRLYRR*	hallmark_hmm	common_virus	NaN	.	0	5322	GCA_009378595.1|RCJR01000016.1@region_1_5322@tool_cenote_CDS_0002	shell	direct	high	3887	1.0	GCA_009378595.1_00227
GCA_009378595.1|RCJR01000016.1@region_1_5322@tool_cenote	cenote	CDS	4204	4536	GCA_009378595.1	RCJR01000016.1	GCA_009378595.1|RCJR01000016.1	GCA_009378595.1_RCJR01000016.1	GCA_009378595.1|RCJR01000016.1	GCA_009378595_1_7	GCA_009378595_1_7	4205	4537	GCA_009378595_1_7_3	GCA_009378595_1_7_3	+	5322	.	PFAM:PF05939.12	minor-tail-protein	MKTFTWDISADSSETTALNTTITAFGDGYEQAVSFGINNRRKSWQCSKTDTKAVIDEILSFLLNTKGVEPFTFAPIKGEPAIKVRLDGEISRQKTGGDVWQIGFTLKQVF*	hallmark_hmm	common_virus	NaN	.	0	5322	GCA_009378595.1|RCJR01000016.1@region_1_5322@tool_cenote_CDS_0003	shell	direct	high	332	0.997	GCA_009378595.1_00228
GCA_009378595.1|RCJR01000016.1@region_1_5322@tool_cenote	cenote	CDS	4641	5030	GCA_009378595.1	RCJR01000016.1	GCA_009378595.1|RCJR01000016.1	GCA_009378595.1_RCJR01000016.1	GCA_009378595.1|RCJR01000016.1	GCA_009378595_1_7	GCA_009378595_1_7	4642	5031	GCA_009378595_1_7_4	GCA_009378595_1_7_4	+	5322	.	.	hypothetical protein	MSETTLTELSRTEATVLQSFIAQVDFWKNQHGDKAATIEVIYYPEDDGFEVANGEPNNGVLKRNRTTAFRADLLAWASNQLRQLQGWDNSQTVTEFSLSYKNDRYGVRAALASEATDKADDGDDAKNTD*	.	hypothetical_protein	NaN	.	0	5322	GCA_009378595.1|RCJR01000016.1@region_1_5322@tool_cenote_CDS_0004	persistent	direct	high	389	0.997	GCA_009378595.1_00229
GCA_009378595.1|RCJR01000016.1@region_1_5322@tool_cenote	cenote	CDS	5114	5320	GCA_009378595.1	RCJR01000016.1	GCA_009378595.1|RCJR01000016.1	GCA_009378595.1_RCJR01000016.1	GCA_009378595.1|RCJR01000016.1	GCA_009378595_1_7	GCA_009378595_1_7	5115	5321	GCA_009378595_1_7_5	GCA_009378595_1_7_5	+	5322	.	PFAM:PF05100.11	minor-tail-protein-	MSFNTDIQQTTVQGFITLYELDARKLGGEIYRFHGHNDGVIRWQGQDFHPIAIKADGLEMRSDGRASTP	hallmark_hmm	common_virus	NaN	.	0	5322	GCA_009378595.1|RCJR01000016.1@region_1_5322@tool_cenote_CDS_0005	.	unmatched_CDS	none	0	0	.
GCA_009378595.1|RCJR01000017.1@region_1_5066@tool_cenote	cenote	CDS	2	181	GCA_009378595.1	RCJR01000017.1	GCA_009378595.1|RCJR01000017.1	GCA_009378595.1_RCJR01000017.1	GCA_009378595.1|RCJR01000017.1	GCA_009378595_1_8	GCA_009378595_1_8	3	182	GCA_009378595_1_8_1	GCA_009378595_1_8_1	+	5066	.	.	hypothetical protein	VLDAIPNDDMNIDMTTGSFGDVILELSQSLKETMGRNTSSYGITPIAIFRVIRTNQQAK*	.	hypothetical_protein	NaN	.	0	5066	GCA_009378595.1|RCJR01000017.1@region_1_5066@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_009378595.1|RCJR01000017.1@region_1_5066@tool_cenote	cenote	CDS	240	3914	GCA_009378595.1	RCJR01000017.1	GCA_009378595.1|RCJR01000017.1	GCA_009378595.1_RCJR01000017.1	GCA_009378595.1|RCJR01000017.1	GCA_009378595_1_8	GCA_009378595_1_8	241	3915	GCA_009378595_1_8_2	GCA_009378595_1_8_2	+	5066	.	PFAM:PF10145.8	minor-tail-protein	MAVVSKLQIVLEATTTAFDRGLKQASENLNAFAKKNEEIHNRLERFNRKHEQALSTMRGIGAASAAAMAAVGYGIKSSVNEAIKFESALAEVKKVVDFDSPEGLVNMRRELENLSTQVPIAFDGLAKIAAAAGQSGIAADEIVKFTEAAAKMGTAFDISAEEAGQAMAEMRTAFKMSQLEVETLADKINYLGNNSPNAAANIMQVVQTIGPLGEIAGVSSDQIAAMAASLTGVKPDVAATGLKNMMIQLTKGDSLAKSAKTAFTQLGLSYTNVAKGMQKDSVGTINKVLEAIKKLPAEAQTASINAIFGAEALPVVSQLVTGTETLTKHLQAMGDATKYAGSMNAEAANINATAAAQMEMFKNATQNAKAAIGEAFIPALAGIVEKLTPTINSIKEFAQENPKLVSTITAVTGVILSLGVAIGAIGLAVPVVTTAFGGLSDIGKLLGNAISGISLPMLGIGVAIAGLIVIGVLLYKNWDTIKAKATEIFNNLPEPIKTAIDNIKSYFSSMKAVFDVVLDTAKAFWHGFSTIPLAAFEVIKASVSFGMNAILSIIKAVLTGIAAAFNFGFDIAKAIVETALGVIKGIINGDMNAVVNAIKNGLKTAGNAFNQLRTDVVNTIKQLGTDLYQAGKDAVDGLVKGINDKISAAVAKSKELASGVKNAVTNFFDIRSPSRVMMQVGYWIADGLAVGIKKGAAKTKKEAKKMAEDIKKATDDERINIAKSVYKLQQELKGNPYADFLTDIAFGKYGDAKKFLKSKDYTQISQLKEAEKRLQNIISINDELDGLRESVRSFGMDEIERLEHAYKTSQKYYSATEDDMLEHIGLLKEIQNLEFGNKIDEIREQRNLIGKTEVEQLEYKLKYYREYRHISDVLKKAMIDEIKLKEFETLQSEKKLDLEKKLHILRGGTETSWLLKQSQFTEEQKKQIEQLTKQIELTEQLAELREKLKDKSVFDVKDAVKSGSFGEGLGGVLEGIAGLGNINAGAIENYAKIEEVFAEEKTKLKQAYEDGLILESEYYEQSKILAEQYADAKEKLLLNATQSTLGGITAITKSAFGEQSKLYRTILAFEKGVAISRSIIAIKTAMAMASANPFPANLGAMATIASQTANIISAIKSVVMPVGQAHDGIMSVPKSGTWNLEKGERVLPRHTAKALDDKLDKIGTGDRPVNVVINNYSGEKTDVQQMPNGDMMVTIGKMISHTVDAKLNQRFIQARRQGGELYGR*	hallmark_hmm	common_virus	NaN	.	0	5066	GCA_009378595.1|RCJR01000017.1@region_1_5066@tool_cenote_CDS_0002	shell	direct	high	3674	1.0	GCA_009378595.1_00230
GCA_009378595.1|RCJR01000017.1@region_1_5066@tool_cenote	cenote	CDS	3917	4171	GCA_009378595.1	RCJR01000017.1	GCA_009378595.1|RCJR01000017.1	GCA_009378595.1_RCJR01000017.1	GCA_009378595.1|RCJR01000017.1	GCA_009378595_1_8	GCA_009378595_1_8	3918	4172	GCA_009378595_1_8_3	GCA_009378595_1_8_3	+	5066	.	.	hypothetical protein	MNEKQMLEFAKDIASPFAKELHARSLANVGTILYLSKKGIIDLNDYLNFMNELKEGLMQSDDYEQETKEAIQAEFDFYRERLIG*	.	hypothetical_protein	NaN	.	0	5066	GCA_009378595.1|RCJR01000017.1@region_1_5066@tool_cenote_CDS_0003	shell	direct	high	254	0.996	GCA_009378595.1_00231
GCA_009378595.1|RCJR01000017.1@region_1_5066@tool_cenote	cenote	CDS	4255	5064	GCA_009378595.1	RCJR01000017.1	GCA_009378595.1|RCJR01000017.1	GCA_009378595.1_RCJR01000017.1	GCA_009378595.1|RCJR01000017.1	GCA_009378595_1_8	GCA_009378595_1_8	4256	5065	GCA_009378595_1_8_4	GCA_009378595_1_8_4	+	5066	.	PFAM:PF05939.12	minor-tail-protein	MGASASVHHAVSKTQFGDGYAQRVSHGINNQRMDWSGSKTGDWQTVILPIKTFLDEHKGVIPFLWTNPHGQTKKYVCENYEISQKKGNFWEISLKFEQSNSDGSSVPLLGSGNQNSGTSTPNLPQSALDDINKKIQDEIERSTQKDDAHDKAIQSLNTSKTSLSKSIDEIKEQLAGVSSAPASVTWDSITGKPSSFNPSSHSHAISDISGLQSLLNAKANSNHSHTWNSITDKPQSFTPSSHVHQASDIADLHTILSKYATKDEIPQINT	hallmark_hmm	common_virus	NaN	.	0	5066	GCA_009378595.1|RCJR01000017.1@region_1_5066@tool_cenote_CDS_0004	.	unmatched_CDS	none	0	0	.
GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote	cenote	tRNA	208027	208113	GCA_009378595.1	RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595.1_RCJR01000003.1	GCA_009378595.1|RCJR01000003.1	GCA_009378595_1_17	GCA_009378595_1_17@C12	14701	14787	tRNA-Leu	tRNA-Leu	+	219331	.	tRNAscan-SE score: 55.3	Leu	NA	tRNAscan-SE	.	C12	26005.0	193327	219332	GCA_009378595.1|RCJR01000003.1@region_193328_219332@tool_cenote_tRNA_0001	.	.	.	.	.	.