core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	114235	115665	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	1	1431	GCA_009378915_1_12_106	GCA_009378915_1_12_106	+	264507	.	COG2951	Membrane-bound lytic murein transglycosylase B [Cell wall/membrane/envelope biogenesis]. 	MRLFLEVFMKNQSATHWALSVMTISVLLSACTSHVTHERAPIKVVQVTPNPAQVAPPAQVPVQASTKVPTSTVQPTTAKPASVVAQKSVVVQKPAPTNTPSMTSQSHYATFTEWKHDFIHRALAKGINANSLNSLMSNATLNQRVIELDRSQAEFTKMPWEYVESAASSNRISQGRSKLTENLSILTSAESIYGTPKEITAAIWGMESSYGAGMGSMDLVNALSSLAYDGRRREFAESQLLAMLLMIERGDVAAPQLKGSWAGGMGHTQFIPTTWIQESIDGDGDGRKNPWNRQDALTSTASYLANAGWIRGLQPFYEVRLPTGFDFLQLNSKRSLDAWKALGLISASGEYFGGVHDAQLWLPAGQYGPALLLTKNFEVIRVYNNSSSYALGVSLLAKKIAGGNDLIQSWPRHEQPLSRTQIINLQKNLTAQGYDTQGIDGVAGSNTRQAFARWQAANGQIPDGFISQRTAGHLVW*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0001	persistent	direct	moderate	1406	0.983	GCA_009378915.1_00631
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	115784	117898	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	1550	3664	GCA_009378915_1_12_107	GCA_009378915_1_12_107	+	264507	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MRLPETTRAERQTNQLARRIQEKAQLTGVNVSGTQISSQAFEMVTDFEPSGDQPKAIAELVKGVEADMRGQLLLGVTGSGKTYTMAKVIAKCGRPAIIMAHNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPASDTFIEKDSAINDHIDQMRLSATRALLERRDAIIVASVSAIYGLGDPESYLKMLLHIVVGDRVHRDAVIKRLVELQYERNELDFGRGTYRIRGETLDIYPAESESLAVRIQMFDDEIEKITWFDLLTGKNIKSVPRITIYPKSHYVTPKEKLEAASATIKEELAQRLEYFRANDKFIEAQRIKERTQYDLEMIGQLGYCNGIENYSRHLSGRPAGEAPPTLFDYIPSDALLFIDESHVTVPQIGAMYKGDKSRKETLVQYGFRLPSAMDNRPMKFEEWEKISPATIFVSATPAQYELEKSEQVVEQVVRPTGLVDPILEIRPVLTQVDDILGEINLKKSLDERVLITTLTKRMAEDLTSYLKEYGIKVAYLHSDIDTVERMKIIHELRTGIFDVLVGINLLREGLDMPEVSLVAIFDADKEGFLRSERSLIQTIGRAARHVNGKAILYADTITPSMQKAIDETERRRAKQIAFNQEHGITPKSASRAITDKIDTGDDETSEVVQIVLSQALACVDENILHSPKLLAKEIARLEKQMQALSRELKFEEAAKVRDTVIALKELLVQ*	common_virus_hmm	common_virus	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0002	persistent	direct	high	2114	1.0	GCA_009378915.1_00632
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	117926	118567	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	3692	4333	GCA_009378915_1_12_108	GCA_009378915_1_12_108	+	264507	.	cd10032	Uracil DNA glycosylase family 6, includes hypoxanthine-DNA glycosylase and similar proteins. Uracil DNA glycosylase family 6 hypoxanthine-DNA glycosylase (HDG) lacks any detectable UDG activity; it excises hypoxanthine, a deamination product of adenine, from double-stranded DNA. Uracil-DNA glycosylase (UDGs) initiates repair of uracils in DNA. Uracil in DNA can arise as a result of misincorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations. Thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other.	MPLLFNDKVKANFMFNQLMTIQTIHRHPLPPFTPPNACVMMLGSFPPPPERWAMPFYYPNYNNDMWRILGAVFFDDTERFIDITHKTFYQDAIEQFLTKTGIAIGDTAEQVIRQKNNASDQFLQIVTPTDIEKILKQLPWCHAFITTGKKATEVLCQQFTSQKIPKIGEQVQLLIGNRRIDLYRLPSSSRAYPLAIDKKADFYRKVFETLGML*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0003	persistent	direct	moderate	602	0.938	GCA_009378915.1_00633
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	118631	122578	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	4397	8344	GCA_009378915_1_12_109	GCA_009378915_1_12_109	+	264507	.	PDB:1UAA_B	Replicase	MTDTILTMPPTPPKPSEQIAALQCTLEQAYLIEASAGTGKTWTLTGIILRLLIEKKYPPERIIATTFTRAAAAEMQERISERLHSFYGLMRWLQGMLSTQPEWFNQTAPIEQIITCADQAGYDAADPINEHLLKFILSQQATFLNEVVYRTGLLLTSLDKLFVGTLDSLAQKWLNEFAAQIGHQSGMEILNNAEQKVAAIVHDEMRAEEVRLKHAQPEFYQIFKAFYPNFFSQVDAVVKIVNKAINFYSAPIDELMPINTDISLTKAMIEQIITTDFTGFTPYFDANFRKQISMNQSLGFGKLIQYLPNLLSLIQKHGVLFVRFVDNDALRLIGAIIKAMDKDWQIFNKSANPSDINQFLALPLQALSDIANVYLTLSEQTNLYHTHICRHIILSAKSQIAQRLEAHGQTTFTLQMVRLNETLRNNPALARQIRHHYPVALIDESQDINGLQVELIELVYLNEIANYHKNLIRYEQIGGEKPKLPRGFLLLVGDPKQAIYRFRGGDVTNYNLIKHYGNQDLLINAPLINQSLSLTVNRRSSKALIEALNAWFDNNHQDGVANHANLGQGIFYQQIQAHKDGGGIHWQSDAYADYYGKYPVAVLHFDHIEAGQKAAQRAEQIARHINTILQGNHTLHGQKILPKDIAVLARTADALDRIKSELDQLNIPAIIPKEMNIFITQAADDLLALIGAILQPNHSENLGKFLVSSLVGMTLKQAMDIIEPNDKQALDNELSETQNLKTHLLAYLKKSYEKWQKFGVSSALAYALHHSPIDHDNDKSPWLKAATQGERYLVDLERLVALVSEQSQLHEMRVIAWYHKQMNADVDSHNKRPILPSESGVNLMTIHKSKGLEFPIVYVIGMDEKPKNENGLTIYPYTNHNFQRCLSLNQGNLIDENYYYHINQQELIDEIRRLGYVALTRASEQLYIVGGDLSKKTSKEMPLYQWLDCAGEKTLSLPDRLKGWVDWIDLTEADLFSQPYQTKLPNLSTKHYAPWDMVMTKTQFFGEYKTSFSALITRLDKSAISPDEADIDQLSVLTDMAASDQFDDIRTSFFKGSLAGDFLHKVMQFLPTDRLALTSLHDTHRIISGVIYEQGRKLGIAERYLPTRPAQQIGTRINSNEHQADDHTKLVAWIYQLAYAPFRASHRSLMSLPMTVQLRELSFTLGLGDTFSITRLNEVFKAHSDKDLVLLNDDYHTMCYRYLRGEIDLVYECDRRFFIVDYKSNYLGSTPDEYHDHAMAAAMDKVGYWLQAAIYQVALHRLLKIRLKDYVGNEAAYLGAVEYVFLRGVQEGNEKTGHLCWQPPLSLILALDEIL*	common_virus_hmm	common_virus	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0004	persistent	direct	high	3947	1.0	GCA_009378915.1_00634
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	122626	124683	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	8392	10449	GCA_009378915_1_12_110	GCA_009378915_1_12_110	+	264507	.	PDB:3UPU_B	ATP-dependent-DNA-helicase	MAGDIISRYVTDRIQDNHQWYAKKQVLAAECTLRLPDFELYHIMQDALLFQLNQGHTILHINDHDDLNDRHGLNGVIPIWQQKIMDSCLTAITHALADEGMDWAAFFDTYHRCADDTIKIKQFVNHALDHFRQQLSLFDHTVMEIEQLAALFLSMLRIYYVLYKNANTLNQFVSLLHNNTFFGDILTPKTQSIPTNTPPIYFSDQADGLYLWTSRAYLAESQLMTHILRISQADVPVFALDQLPSSLNTEQRDAIKLVSKQAFCLITGGPGTGKTFTVAQIVIALNQRDEHKKMRLGLAAPTGKAAQRMSESLLKSLDKENDIQLPEPKTIHRLLGIGANGSPRYDAKNQLPLDMLIIDEASMLGTELASQLFAAIATGCRVILLGDTHQLAAVDAGAVLADLCRIERLRHLRVNLTASKRFTDTSGVGQLAKLINDDRQNIHFDEIQQLINCHTNIDFHPITHALMHNDTYQKLSQDYQDYFLASKRLRFSFAKLSGQDAIDSVKNLFEILDTYRILCASHIGVFGDDQINDYLSLAHRAVQKIPPSASPWFHGRVVMVTKNLYDLGLFNGDIGICLWGSSGLSVYFEGETLRMVAVDMLSDTVVSTAYAITVHKSQGSEWQKVAIIFDENSERLLSKELIYTAVTRAKSAVHIYSTHDALINAINTPTVRQTGLDKVSDGRQS*	common_virus_hmm	common_virus	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0005	persistent	direct	high	2057	1.0	GCA_009378915.1_00635
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	124816	125841	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	10582	11607	GCA_009378915_1_12_111	GCA_009378915_1_12_111	+	264507	.	COG0042	tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]. 	MMTDNKLQKSLKNQHILSQPLSIGGLKIENRIWVAPMAGVTDNPFRRLCKSFGAGHAVSEMIIADTALYARKKSLYRANFDGEIAPISAQIAGAEPDKLAQAAQFQVANGAQIVDINMGCPAKKVCRKLAGSALLQDEDLVRRLLDSAVLAVDVPVTLKTRLGFANGQENILKIAQIAEQAGVAAITIHGRTREDFYTGQARYELITQVKKAAKIPIIVNGDIDSPQKALDIQAKTGADAVMIGRAAQGKPWLFQQIAHFANTGELLASPMVAEIHEVVLRHLDELYRFYGEYSGCRIARKHIAWYTGGLPNSNAFRDAMYACETTKEQFEVVDKFFKTIS*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0006	persistent	direct	high	1022	0.996	GCA_009378915.1_00636
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	125838	127391	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	11604	13157	GCA_009378915_1_12_112	GCA_009378915_1_12_112	-	264507	.	COG1570	Exonuclease VII, large subunit [Replication, recombination and repair]. 	MPKNTIIKHVEALGSTLDDPETLLNKHRQIAESFEEKLAKEAVFDENFNNLADAHLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTKGGHYYFELAETDDVDQITASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHTNYGFSLSISDIDPNYTLGEIAAAYTQMKKRLSEEGLLHLNKQHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLALAGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTMPDLLVIIRGGGAVGDLAYLNDFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKVILGIESHLVKMTRQAVATMERLTKITNTRLMMAKANSQRQIEQIQRSSLHAINMAKKDNVYQLNHIKSTAKFRHHQEKSALTALLTQTQKASLAITSQAKHTTKIHLNRHNSLFDHLSKLKKDCRYLQSLILIQHPSRMLQKGYALIHSNHTNESIHSTKTLQQNQSIKITFKDGTASAVIKDISTHKTT*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0007	persistent	direct	high	1553	0.999	GCA_009378915.1_00637
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	127543	128679	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	13309	14445	GCA_009378915_1_12_113	GCA_009378915_1_12_113	-	264507	.	TIGR03707	polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1). [Central intermediary metabolism, Phosphorus compounds]	MTTTPKPKTATTSSTTATTAPKKTTSTRTKVSTATQTKPKPSKAEAIMTQTVGQLEELLEHATPEELAEFGEALKEYLPTTQVISQVRTDKSRDTQLSDNWREGGYPYKYRLSRKNYEAQKYKLQIELLKLQHHIKTTGQKLVIIFEGRDAAGKGGTIKRFMEHLNPRGARVVALEKPTEQERGQWYFQRYVQHLPTAGEIVLFDRSWYNRAVVERVMGFCTDEEYRIFMHQVPEFEKHLVESGIHLVKFWFSVSREEQRVRFASRENDPLKQWKLSPVDKASLNKWDDYTLAKEAMFFNTDTAEVPWIVIKSDCKKRARLNAMRYVLNKLTYENKDIAQIGNIDPLIVGRAGALYEMDERIDLTVSTQLSRKTTTTK*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0008	persistent	direct	high	1136	0.999	GCA_009378915.1_00638
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	129845	131740	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	15611	17506	GCA_009378915_1_12_114	GCA_009378915_1_12_114	+	264507	.	PFAM:PF05939.12	minor-tail-protein	MVNISHVRIVAVVIALDLIIIISKQVTAVGYAVKAWAKRLGAMVGAVWLANIAKNSALVTSFVTLTGATLASTKASIANAFSVQGQITAYNALSTRMMLLRLTKAHYIDLTKTAIATTAVYARSLVGLATSFDRTTLATKAATLASIGWTKTKRSAMGVGILATRTITGLGGAFMSLGRIITAHPIIAIGAVLASVVVSTHGVTGAINSLSDAFGVVTLMAKDFIGFIGDGFSMAWDTVSAFADNMLAKVGDTTKGSTGAFSNFFATSHGGFVGMLQVAAKTFDLINAAAKAGAKNALHNFVQLGKTTKNIFYGIGNAFVSIIEMMINNAARKIDFLSTKANGMAKVLGIEASIPLIGTVSLGRLQYDNVDFGVAHTIKDNNTNSAYDYVTKLADKATQATKANASLADSYNSVGSAATNAANATKNASDKTKKTADDITDAINELDALVAKLHHESHQLLNNSLSEIIFETDNKLGKFYGATEAQKQKLKDLAGQKDLYTATKKADDELKSLARTIKLVGKQTPFDELHHDLFDVRHEMSVLNDETKNSVLLWAANAENAKLAYELNQRSSQINTVILPIKDFLDEHKGVKPFLWINPHGQTKKYVCENYEISQKKGNFWQIVLKFEQVF*	hallmark_hmm	common_virus	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0009	shell	direct	high	1895	0.999	GCA_009378915.1_00640
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	131742	131939	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	17508	17705	GCA_009378915_1_12_115	GCA_009378915_1_12_115	-	264507	.	PFAM:PF16777.4	transcriptional-regulator	MPKIVANPKTRAQIQKDSDTRRGVKQIGFKVPISFVQRLDELAKQTGKTKNIIIMEAVDLWAKQL*	phrogs_hmm	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0010	persistent	direct	high	197	0.995	GCA_009378915.1_00641
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	132306	132941	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	18072	18707	GCA_009378915_1_12_116	GCA_009378915_1_12_116	+	264507	.	PFAM:PF06805.11	tail-assembly-protein-I	MMHHGRFFIGGNSAMKTIILHGILAKKFGKSFDLDVKTAKEACHALACQIPAFYEFMMNAEKQGIKFAIFNGEKRTQKTNIGEKQVDDITTASHIHIMPRVIGSGGKAMGWLQVVAGVVLVGVGAVIGNAGLIAAGAGLILGGVSTLLMPTPKLDPNNEDGNRPNNGFGGAITTVAQGNPVPILYGEREIGGFIVSAAIYAEDKMVQGVKI*	hallmark_hmm	common_virus	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0011	shell	direct	moderate	593	0.932	GCA_009378915.1_00642
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	132950	135010	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	18716	20776	GCA_009378915_1_12_117	GCA_009378915_1_12_117	+	264507	.	PFAM:PF13550.5	tail-protein	MKIYGAKRQKQSSRKPYIQKDTASSTNFYQALYGLSEGEIYGLVDGGKSIRLDGTPIINDNGEPNFPDVSWDFRAGSIDQTHIKGFSSVENEQSINVELRHDRPYTKAINNKQLSAVAIRLGFNALREQKDNGDVVGYRIEYAIDVQTDGGAWEMVLNTAVDDKVSQGYQRSHRIDLPKAQQGWSVRVRRLTPNRDSETVSDSMVVSAVTEIIDAKLRYPCTALLALKYDAQTFSNIAKVAVHVRGMLIQVPSNYDPTARTYDGLWDGTFKLAYTNNPAWVFYDICTAKRYGLGDRLAGKVDKWSLYRLAQYCDEMVDDGKGGKEPRFTVNVYLQKADDAYRVLQNLASAFRALSFWDGQSIVVDADTPKEPVYVFSNANVIGGEFSYTGTRARDRHTIVKCAYDDPDNNFETDYIYVQDEHAIAKYGINQLELNLFGCTSKGQAQRAGIWALKSEQLETETVSFSTGLDGFIPKVGEIIHVQDNHRAGRMQAGRIVATDGRQITLDRMAGKIGDTLMVGDNSAQIVQIDDTVITTDTAIGSAGQVFAISSSDVAPRAYRVMTISQNDDASFSFTALQYEIGKFTATNNIAAIPKKEVSVIKAHVLTPPNSVTLTEHTRTHQGQAITTLVIGWEQVVGAVAYVDKDEIDGTAGRMTVNRATQVQAVTPDKIREVGEQFRSHPKNHI*	hallmark_hmm	common_virus	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0012	shell	direct	high	2060	1.0	GCA_009378915.1_00643
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	134973	135167	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	20739	20933	GCA_009378915_1_12_118	GCA_009378915_1_12_118	+	264507	.	PDB:2MXZ_A	L-alanyl-D-glutamate-peptidase-endolysin	MSNLDPTLKTISERSLKSLQGVHPDLVKVVLHAIKISPVDFSVMEGVRTKEHQRELVKKEQVKP*	common_virus_hmm	common_virus	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0013	shell	direct	high	194	0.995	GCA_009378915.1_00644
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	135187	135459	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	20953	21225	GCA_009378915_1_12_119	GCA_009378915_1_12_119	-	264507	.	.	hypothetical protein	MVYLVIIFGLITMQIKLSNLSEWVSAPYGLVKQIMGYRPTATDEKHDKDILIDLLRYWHTIADCAIALAGDKSSKFHEILPPIIGTISTA*	.	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0014	shell	direct	moderate	237	0.868	GCA_009378915.1_00645
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	135840	136940	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	21606	22706	GCA_009378915_1_12_120	GCA_009378915_1_12_120	-	264507	.	COG0842	ABC-type multidrug transport system, permease component [Defense mechanisms]. 	MRRFIKQYLTIWLDVIKDRSIFLTMVLSVVFYGFFYPFAYQAQRPADLPIVIVDEEQSPLTQAIIHTTSHTPNIHVLAVVSDFRQAQMLIQSAKADGILLLPDNLSQSIHHGQTGGVGLYLSSAYFLRTQNIGAGLVSSLQATIIQELGQVTQTRHKPMPELIHQSALFNPLSGYGSYIFPAVAPIIVYQTIVLGLAMLVAGYRQRLWRASACDFLAIYAVALTIGCLSCFYLFGFVFWRHDYPRGGNFWGMMLGVPIFVSCAIGVALLIASWVADGAKVGVLLIFSSVPLFMLTGLAYPLMAMPKFLQPLANALPTTQGVQMFVQLNQMGVPIQDVWQKMAYLASVAVLCLGVAFWRLRSVNKSV*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0015	persistent	direct	high	1100	0.999	GCA_009378915.1_00646
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	136940	138118	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	22706	23884	GCA_009378915_1_12_121	GCA_009378915_1_12_121	-	264507	.	PF12698.7	ABC-2 family transporter protein	MIVRFIRAFCQAFLRELNRLSCNRFDLAMVMIAPLVIIVLFGAMFYHGKAHHLPVALVDEDNSELSHLIYQHIHHNETVEAVLILDDIQDAHHAINRLDVGGYIHIPKDAQNRLVRGENTGIHIAYNQSFFSIGSAISSALSKSTKGGIAKFIQTKHLTGVLPHLSGNMPHVKISVLFNPNLSYEFFLEPFLVAAVLHLLLCCLVAHAIGQEFHEYSVYEWLYHSPFGALFGKISVYVLIISLWHGLWQAWLIGVRGWFVAGSLFVLIIGQLLFYLAYALFGAMVVLKTQNINKSYGILAVYGGSSMSFAGVTLPLNNASGFTQFWSQIIPFTPFARLQVEQWVIGSPFIITLAHLNSLLIFVLIFAIGSLLLLRRIKKTLIAMPNTPKDDS*	hhsuite_tools	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0016	persistent	direct	high	1178	0.999	GCA_009378915.1_00647
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	138146	139309	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	23912	25075	GCA_009378915_1_12_122	GCA_009378915_1_12_122	-	264507	.	COG1566	Multidrug resistance efflux pump [Defense mechanisms]. 	MTDKTDDAKPDTDGNHPKKQKPHTQAKSKPRPLALFLLLALIGSVLLVIIFGLIQSYGTPQNLPTANAVGSTNEPPKGVIAHVRQKIAGPATFSIQGRVEGETVNISTKLPSRVAAIYVKEGQAVRAGEPLVQLISPEIDAKKQQAAAMLQSALAFQSSTDRGTRQENVDTLYANWQSAKAQATLAEESYRRGEYLYQEGVISRQRRDEMRAAKQSSAQIAQAAQQQYLKAERGRTDELKSSADAQVQIARAAVAEADALDAETMLYAPIDGTVSKIYIQSSELVMPAVPVMSLLDNHPTITISVQENQYSHVHALPKLTGFIPALNKTADFKIVHTEDEGEFATIKNTRQTGGYDIHSFKTKLEPITPIEGLKVGMSVIFDITVLP*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0017	persistent	direct	high	1163	0.999	GCA_009378915.1_00648
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	139356	140852	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	25122	26618	GCA_009378915_1_12_123	GCA_009378915_1_12_123	-	264507	.	5AZS_A	Outer membrane protein OprJ	MSIKCQLVAIDNIIKPCYDRILNFVYFSTMKMPYFLLLGLLLVQQADADYSLLDAQKQLMSSSPAIQASHALYQADILQAESLQKLHYPRISLNAHAFALQQNSNIPLDNIKEQTAQHINTHFDHRFGNAPNGLLDALHDSTQTALDRLPDHQDVKLRHDGITPNITATMPIYTGGLISSSKNIANLQAQRGKFGLQERISLTKLNLIRHYFNVQLQKQLTDTQQNTLSAMQLHVDNAYKLEQQGFISRGQRMQFEVARNQVQRLYQNTQNQHQNSIYELAVLLGLPHIEPLSTPLFINTQHRPNWQALLKDSQNTPLNQKLKTDILLADENIALRQSTKKPKIAAVARYTLDDKPDWFAGVAVQYNLFSGIDRDKQIRAAHLQKQAAKSGHEQVNEHITTTMHTAYGEMVLAQKTHALLQQNHQAAKENLRIQTLSFQEGFGTVAGVVDAQSALSQIDSETALNAYRYLLALATLLHYTGAIDDFDDYLSLDDAHKL*	hhsuite_tools	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0018	persistent	direct	high	1496	0.999	GCA_009378915.1_00649
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	141041	145213	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	26807	30979	GCA_009378915_1_12_124	GCA_009378915_1_12_124	-	264507	.	PDB:5XDR_A	Replicative-polyprotein	MHSTDNLPVLAKDRHYLNKLKQKVDSTTGDLKAKCKIRYDAIYKRSAEQVANRMDSIPKNLSEKLNHDLPVTAEADTLIQAIREHQVVIIAGETGSGKTTQLPKLAMMAGRGVTGQIGHTQPRRLAARSVAMRIAEELGETLGQTVSFKIRFTEEGGKHSIVKLMTDGILLAELGSDKFLANYDTIIIDEAHERSLNIDFIMGYLKRLLPKRPDLKVIITSATLDTQRFSDYFSVHGKPAPVYIVEGRSYPVEVRYRPLTDTIVSSQDDDAFDDIEDNLPRALTAAVNECFEDARAKGHPDQADILIFAATEAEIRELQEVLMLYAPAHTEILPLFARQSYGEQQKIFAPSGKGRRIIIATNVAETALTVPNIRYVIDLGFARISRYNYRSRIQRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFNSRPEFTEPEILRTNLASVILQMERLQLGDVNAFDFITPPDLRLVNDGRKLLIELGALDDKSFTKTRAKKGRTQLSSLTKIGQQMAKMPIDPRLARMLVAGDAFDCLADILIIVSALAVQDVRERPINKHAQADQKHALFRKEDSDFLFYLELFAALFDRHSTNDNQALSSNARRNFAKKHYLSYARIREWQKTHRQLSEMMAEMGFEINKQKNHQNDVKIDTKKGVRLSLKSGTSHQKSIKQALVGAKALKNDIDNKTSIHYANIHRALLSALLSFVAHKTDTVGEYLMARSQKARIFPASTLHKKGAQWVMAFEVVETSQVYMRTLAKIEPEWIIKAAPNLLKYHYFEPHWSKKAGRVRAYAQISLFGLIVIAKELVNFEQIDLVQAREIFIRDALVANQYGMQMKFLADNANKIKDIERIEDKLRRRDLLVDEERLYQFYDAKIPNHIASRKSFEEFYHDAENKTPNFLHFSDEDVLNEAVDDNREFPESWHLGGVRLPLSYVFDPAADDDGVTVRVPIKALAQVDPVALLWGISGWRYELVLQLLKTLPKEIRRQIVPIPDTCQKIFHQLDASSKMGLLDQLVAALKTLGVQTQAQDFAPDKVEDYLRPLICVVDDKNRVIEKSRDLPKLQARHRKTSVQSIAVEQGVHHHFPNHFNFVKNKHTSGIVMQEFSALKADKTQSAVFIATFTEINTALAEHKKGVLTLIKGRLGAKQKQLTSQIDKAFKLAFAPLGDLEKLKNIVVHATLEACLYEYGQDFDHKPVSQHGDHARAAIAGLVTQNNQWLISHLPLDEREFDNCQDLILKNFLLVGQEILRSLKEIYTAWQTARGKLLMLDQEIFGENIEDIEDQLDDLQLANFVYQTDYRYWRQYPRYLQALNIRLDRLQHNLEADLDAVYLLDTHMERLARCVKNPKFAEYRWLVEEYRINLFAQPMKTAQPVSAKRLETLWANLTTQ*	common_virus_hmm	common_virus	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0019	persistent	direct	high	4172	1.0	GCA_009378915.1_00650
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	145489	146178	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	31255	31944	GCA_009378915_1_12_125	GCA_009378915_1_12_125	+	264507	.	TIGR02796	TolQ protein. TolQ is one of the essential components of the Tol-Pal system. Together with TolR, it harnesses protonmotive force to energize TolA, which spans the periplasm to reach the complex of TolB and Pal at the outer member. The tol-pal system proves to be important for maintaining outer membrane integrity. Gene pairs similar to the TolQ and TolR gene pair often number several per genome, but this model describes specificially TolQ per se, as found in tol-pal operons. A close homolog, excluded from this model, is ExbB of the ExbB/ExbD/TonB protein complex, which powers transport of siderophores and vitamin B12 across the bacterial outer membrane. The Tol-Pal system is exploited by colicin and filamentous phage DNA to enter the cell. It is also implicated in pathogenesis in several bacterial species [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MNESISLISLVIEASIVVKLVMAILLLLSTISWVLIFHLGAKIGGVAKFDERFEQWFWTDEIDRQLSVVQAESERVGLELIFYTGFYDQNHTNQDFALSDDKKVQMVERRLRMALGSEQVRLEKGLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQAESVGLATVAPSIAEALIATALGLFAAIPATMAYNHFTAKSNTLYENRSLFCEGLMSALVTNLAKKNTASTL*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0020	persistent	direct	high	689	0.999	GCA_009378915.1_00651
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	146203	146637	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	31969	32403	GCA_009378915_1_12_126	GCA_009378915_1_12_126	+	264507	.	TIGR02801	TolR protein. The model describes the inner membrane protein TolR, part of the TolR/TolQ complex that transduces energy from the proton-motive force, through TolA, to an outer membrane complex made up of TolB and Pal (peptidoglycan-associated lipoprotein). The complex is required to maintain outer membrane integrity, and defects may cause a defect in the import of some organic compounds in addition to the resulting morphologic. While several gene pairs homologous to talR and tolQ may be found in a single genome, but the scope of this model is set to favor finding only bone fide TolR, supported by operon structure as well as by score. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MVTSNRFARRQRPLNSDINVVPYIDVMLVLLVIFIVTAPMLATGVEVSLPKEQTKPITQADKLPVIVSIQADGNLYVSHKNAIDVPITPDKLDALLRQMHQDNANLQVMVNADADNAYSQIMHIMALIQNVGITQVSLLSESVQ*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0021	persistent	direct	high	434	0.998	GCA_009378915.1_00652
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	146668	147462	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	32434	33228	GCA_009378915_1_12_127	GCA_009378915_1_12_127	+	264507	.	PF06519.11	TolA C-terminal	MRLSDNHPTVNFDKSALILPILASILLHTVIIIAVAAPLITPPTKPNTAIQTALVGQEAFNSAKTALSNHHANQNKPTAANASSTITANDNAFIQAQNQHRYRPQVSTSATTTQAYHPLPNSAPFESNSPNIQNQPTNAHAKLAKYSNNDSGLGQANHTESTPSRAQINAAISSVKHRIETIWQRYPKQPNQTITFQVNINQQGDVTSIQFGGGHPDLRESVEAAVYAAAPFYELGGMRDSIRLQFTTEQLIMDNSQTPNEPNH*	hhsuite_tools	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0022	persistent	direct	high	794	0.999	GCA_009378915.1_00653
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	147479	148741	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	33245	34507	GCA_009378915_1_12_128	GCA_009378915_1_12_128	+	264507	.	TIGR02800	tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MKSPITKVCLALTISFAAALTHAYADDELIVISEQVAQSRYPVAVMPFSEAHQMSHYLSLAGLGATHQNLPQHTQTNHDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEIIDTANGSVSVKHTQISDNHPASIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNKISSLKLIDPNGQLIRTLDTVNGSIITPTFSPDGLSIAYSVQTKNNLPIIYIVPVSGGTPKLITPFWGHNLAPSFSPDGGSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPNYLADASGFIYTADKGTRRQSLYRYDFGTTHSTQIASHATNPRLSPDGSKLVYLSGGQIIIANTKGRIQQSFRVLGTDVSASFSPSGTRIIYTSNQGNKNQLMIRSLSSNAIRTIPTSGTVRDPIWSK*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0023	persistent	direct	high	1262	0.999	GCA_009378915.1_00654
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	148741	149010	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	34507	34776	GCA_009378915_1_12_129	GCA_009378915_1_12_129	+	264507	.	.	hypothetical protein	MPMSIPTKVTVGYTQRRLFMVGMIIGLISLSGCQHIQATKSPIPIIIHSHTKSPSQPEPTPTNAMPTKNPPISPQTQKPNTIFILEDWF*	.	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0024	persistent	ambiguous	low	3	0.011	GCA_009378915.1_00655
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	149007	152564	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	34773	38330	GCA_009378915_1_12_130	GCA_009378915_1_12_130	-	264507	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MMIDTLKPKLNLPTKANFKTTLPLLGGADLSFWLALAAKSEERLIVMIANHQNELNQLDTELSFFGIDAHVFPDWEILAYDQLSVHQDIVSERIALLTRMPTTGVLLVSTQTLMQRIAPPSWLIGQHFDLAVGDKFDINEQRLRLTKAGYVQTENVFEPGEFAVRGSIVDIFAVGQSLPFRLDLFDDDIETIKFFDPDSQRTLSDNDLAQLKKDAQAGMNTHHAQKLPSSAKITEFRLLPAREFPLEEGKEMFRQNFASLFPNASARKIEFYNDVMAAIAPQGIEFYAPLFFELDAWMKTGNLFSYLPDDTLMVSHDNLSACHDEYYQQIQARHHSRAHDKSLPIMPPDYLFLANNEFHQALKAYPRVIINTNHDTAKIGTIASLPPPILPINHQAAKPLSELLSFIKSGQVPILLVAESAGRREIILELLKDKVTVKVVDNYQEFINNLDDFNADCIALSVAPIERGLWLRDETGGLCIISETQIFGRQVLQTRRRRQSSVSQAFLVKSVTELTEGALVVHLEHGIGRYQGLVVLDVGEGEQEFIHLKYADDASIYVPITNLALIGRYSGSDLQTVSLSKIGSGKWEKAKLKALEQIHDVAAELLNVQARRNAKSGISFDIDMSQYELFASQFAFEETIDQAEAIHAVMHDMKQNKPMDRLICGDVGFGKTEVAMRAAFIAVQAGYQVAVLVPTTLLAGQHEDSFLNRFADWPIKIESLSRFGNKKHQDAILAGLADGTVDIVIGTHKLIQDDVKFKQLGLMIIDEEHRFGVRHKERIKAIQTNIDSLSMTATPIPRTLNMALSGMQDISIIATPPARRLAIKTFLLPKSDETVKEAILREILRGGQVYYLHNDVASIEAAADTLRELVGEARVAVAHGQMNERELSAVMNDFYHKKFNVLVASTIIETGIDVPNANTIIIHRADKFGIAQLHQLRGRVGRSHHQAYCYLMVPSLKGLSSDAKKRLNAITRANTLGAGFMLASEDLEIRGAGEILGKEQSGNMQTIGFGLYMDMLERATNAIKQGKTPSLATPLDLVSDIDIHASALIPDEYLGDVHERLVFYKRISSLDDVNQLIDIRTEMIDRFGTLPIQTQNLFAVHRIRIRAKALGITKIDATQSTINIEFRADTPIDGLAIIKLIQSNGGYRMNGATAIRYTSQELMDTQARIDKVNELLLYFESAKTA*	common_virus_hmm	common_virus	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0025	persistent	direct	high	3555	0.999	GCA_009378915.1_00655
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	152566	153228	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	38332	38994	GCA_009378915_1_12_131	GCA_009378915_1_12_131	-	264507	.	COG0352	Thiamine monophosphate synthase [Coenzyme transport and metabolism]. 	MTLQSIDKVPKLYLLTNDDELTTLLDKLERVFDTGAVSLLQVRRKSTLKLYDLATVYREAEMIVSLANDYDIKVVMNDNLELASHFGTGLHLGQRDGSVRVAREILGDDVVIGRTCHTDIALFKEAKREGATYGAMGTAFASITKPRAKIISKDILKKACEFDFPLCVIGGITLENIHQLRDELNGAPIDYIAVTADIMGHSVDTIADKCLAWQHKLNTW*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0026	persistent	direct	high	662	0.998	GCA_009378915.1_00656
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	153383	153820	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	39149	39586	GCA_009378915_1_12_132	GCA_009378915_1_12_132	-	264507	.	6AF2_D	HIT domain-containing protein	MFQLHPTLAKDTFLVGDFPLSTVRLMNDCQFPWLILVPRVSGIKEIYELSVADQIQFLRESSWVSSQMAKIFGADKMNVAALGNQVSQLHFHHIVRYQNDAAWPNPVWGHEAMPYTQEVLSHMQQTLMMALRGHHQMPFDWKMDV*	hhsuite_tools	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0027	persistent	direct	high	437	0.998	GCA_009378915.1_00657
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	154407	154604	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	40173	40370	GCA_009378915_1_12_133	GCA_009378915_1_12_133	+	264507	.	PFAM:PF16777.4	transcriptional-regulator	MPKIVANPKTRAQIQKDSDTRRGVKQIGFKVPISFVQRLDELAKQTGKTKNIIIMEAVRLWTKQA*	phrogs_hmm	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0028	persistent	direct	high	197	0.995	GCA_009378915.1_00658
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	154567	155373	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	40333	41139	GCA_009378915_1_12_134	GCA_009378915_1_12_134	-	264507	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MILTEQTKSFILNHAKRCYPAECCGLIIGGQYYPCDNVAPNPTEHFEIHHLDMVEMEEYHGEIQAIVHSHPNGNAEPSEIDRVQMGVHGLDWVICGFGYHADGEQYFNIKCHKPKVYQAPLLGREYYHGVQDCYSLVRDYYHRELDIHLPDFHRSDAWWEHENHEPLYEKNFTKAGFIKVQDKNDLQKHDVILCRVGRTHHVNHALIYLGDGKLNSEKTPDCVGNALILHHPHGGLSVREIYGDSWQKRTAMVVRHARLVSSKAEPPP*	mmseqs_cdd	common_virus	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0029	shell	direct	high	806	0.999	GCA_009378915.1_00659
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	155427	155828	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	41193	41594	GCA_009378915_1_12_135	GCA_009378915_1_12_135	-	264507	.	PF18726.1	SAV_6107-like HEPN	MAISINELRQVPDEMIKTMNEQSSEAVFRAYINRTYYCIYHQAKCSIEQGDFGNFDLSDKGTFKTGTHNRIYEVFLECGKTNTKAKILAFKFRDFLNKRHKADYQLTDKITWYDVLECKKYFETIPTLLKEIT*	hhsuite_tools	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0030	cloud	direct	high	401	0.998	GCA_009378915.1_00660
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	155828	156607	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	41594	42373	GCA_009378915_1_12_136	GCA_009378915_1_12_136	-	264507	.	.	hypothetical protein	MQPKSRTNEAYEFLQNYQGLTNPDSFQFHRWLRESEQLIKKNAIDAYSLKSFAYVLMGKPKKALYSMQNAKKLGDRYATQNIMNIFHNMGDFEKSTQIALKNIPTNPQTLVYVRALLLGSLFLLMPDNIHQALLLYRGQDDDVVEYESKAVLDEIDKRKSLLETLNINKEVFIKIFKKIYYLLSHHYIGNPITSVVDEYTEIGGNLRINIFLENIDIEYCLELNDLFLEELINDGLLDFSEYKNIMVSFIPAQYADKVA*	.	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0031	cloud	direct	high	779	0.999	GCA_009378915.1_00661
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	156664	157332	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	42430	43098	GCA_009378915_1_12_137	GCA_009378915_1_12_137	-	264507	.	PFAM:PF05100.11	minor-tail-protein-	MSFNTDIQQTTVQGFITLYELDARRLGGEIYRFHGHNDGVIRWQGQDFHPITIKADGLEMRSDGRASTPKLSIGDKINGIQGAVSALCRLYDDFARAKLTVTHTLQAYLDSHDAQNYRQQEWYIEQKVSENPSLGIVEFELSNPVDFEGQKIPVRQITTYCNEAVCGRYRGEICGYTGTKRFTHDGKPTDDPEQDRCSGLLAHCKLRDNEGSFCGFPAAGLV*	hallmark_hmm	common_virus	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0032	shell	direct	high	668	0.999	GCA_009378915.1_00662
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	157432	157833	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	43198	43599	GCA_009378915_1_12_138	GCA_009378915_1_12_138	-	264507	.	.	hypothetical protein	MSETTLTELSRTEAQVLQSFIGQVDYWKIQHGDKAATIEITYYPEDDGFEVANGEPNNGVLKRNRTTVFRADLLAWASNQLRQLQGYDNSQTVTEFSLSYKNDRYGVRAALGSEAKTTDKADDGADDKAEQTQ*	.	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0033	persistent	direct	high	401	0.998	GCA_009378915.1_00663
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	158048	158239	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	43814	44005	GCA_009378915_1_12_139	GCA_009378915_1_12_139	+	264507	.	COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family [General function prediction only]. 	MASSREVIKLIKADGWYRVKSNGGSHQQFKHPTKKGRVTIPHPKKDLPQPTIDSIMRQAGLSN*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0034	shell	direct	high	191	0.995	GCA_009378915.1_00664
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	158273	158677	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	44039	44443	GCA_009378915_1_12_140	GCA_009378915_1_12_140	+	264507	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MLYPIAILKGDDKTAHGIFFPDVPNLASACDDLQDIHKMALECLHVHFSGLVDDGEEIPLPTNFDAHTQNSQFDGMMWAWVDVDLSKYDIKSHKINITLPNHLIAKIDEKVSAHKSLYKSRSNYLAQLAMADLA*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0035	shell	direct	high	404	0.998	GCA_009378915.1_00665
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	158694	159026	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	44460	44792	GCA_009378915_1_12_141	GCA_009378915_1_12_141	-	264507	.	PFAM:PF05939.12	minor-tail-protein	MKTFNWDISADSSESISHNTIITAFGDGYEQAVSFGINNSRKSWQCSRTDKKAVIDEIYRFLIDTKGVEPFNFKPLTDEPSIKVRLDGEISRQKMGGDAWQIGFTLKQVF*	hallmark_hmm	common_virus	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0036	shell	direct	high	332	0.997	GCA_009378915.1_00666
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	159013	159180	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	44779	44946	GCA_009378915_1_12_142	GCA_009378915_1_12_142	-	264507	.	.	hypothetical protein	MGDFITFLTYIESEKLTMAKFIILMITLVILMLIYKAPDIYRIYKEFERKDNENF*	.	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0037	shell	direct	high	167	0.994	GCA_009378915.1_00667
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	159251	163168	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	45017	48934	GCA_009378915_1_12_143	GCA_009378915_1_12_143	-	264507	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MGYWYLLNRSDWAFLLGEFMSNTYRLDIQVNADSANTALGNLKEHFDKIEQSSGKAGVGIDGFSDKADKASKSSKKAGDEAKKAGDGAKKFGDGAKKAGDDIDGLKRKTDGLKTAFGTLKGVMFTALAVAGVGGIIATADDMQTLTSQIKIATTSTKDYAHAMSEIERIAMGNMVSLDSVGQLYASNERSLKQLGKSQDEVIKFTENITTAMRVSGGSAESQAAALTQLGQAMASGVLRGDEFNSIAEQAPVIMELLADSLGVTTGKLRDMAKEGKLTSKVVYDALAGASASDKLAEKSKKMSTTISGAMQNIQTQWRLGVDAIMNGEGGLSSVLADGINSIALGASSFVDSLPAINQAITDTIAKAKEMGTAFLESDFGQSAIQTAKDAFEQLKSAMQGVADIAGDVKAFFEKNPELAIALASGIGAAAGAFLLFKGVLIVWTGVATLATAAGGALAAVMAVLTSPITLVIAAFATLVAAGVYVYRNWDTIKQKALDAWNSIKETWQGIGEWFGELWGKVKQSFFDWLSQMPEPVQDMVANIGEIFSTIVDVAGAVWDGIADIAKSVWHAITEFVSFAIDKIKPIIKSVLEFFKNAWDGLVGIAKTVWQAVIGVVSHVFDKISGIISTQFEAMKAIFMAGVTIFASIFNAGFEMVKNIFSTAFKVIKAVLTGDMQGVKDAIKDGFLKAVDISKKLVGNIVDALKKLGKDLLQVGRDAMQGFINGISEKIDAAVSKAKEMASSVKNAVTGFFDIHSPSRVMKQVGGWISEGLAIGIAYKAPIAAKEAKNLAKSVKDALESELQKTAEEIFLTKQYIKGNPYAQLTKDIAFGKYGKQDTSRLQKLAQEQILQSNILTLTQQLHEAQQNLANVGLTSIEIMQRQYDETDKSVRASLDLFEQVKQVSQALIDATHRHEATQEFESTLKDITKQMAIMGKGEPLAEFLYDLQNAEKYAYYTAEQLATLKDEMIKLQNAKDAKQASDGIKESLKDINKQLALLGSNHPLDDFFYELEQTDKYTHATTDEINELTDAIFKLQNAKDTLNAKQAFDTLMKDTALANETPAQRLQREYDEKMAVIDRYEQMHSDKLGDATSLRQQITERYEQAEKDAKVKNYQEHLTAFAGFLKNTAGEQSKAYRVMFAASKAYALADVGVKMGKAVADAWADPSAVTVWQKLANVAKVSWQEGHVLSMINAISPKGFATGGYTGNMGINQVAGVVHGQEYVLNAKATKRIGVGNLERLNRGDGIGGHVNNINVHVTVNSDGSNVQADTQMGKAMGEAMVKIARQVVIQETKQNGHLDRLYRR*	hallmark_hmm	common_virus	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0038	shell	direct	moderate	3861	0.985	GCA_009378915.1_00668
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	163209	164009	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	48975	49775	GCA_009378915_1_12_144	GCA_009378915_1_12_144	-	264507	.	PFAM:PF10547.8	P22_AR-protein	MSNISIFNFESTKQVRTAIRDGGDIWFCLPDVAGILAIKNSRDIVAKQLDKKGVEKIYTPTVGGQQELTFINEPNLYRVIFRSNKAEAVKFQNWVFDEVLPTIRKTGQYTTAQKATKDERKPLVQAVNMLVTETGAIYSNVWKMIHQRFGVDCVDELTNEQVYQAVEYVHGLILQHGKKPVDDVLLYKVLVDSAVYLRDYAVLIKQMRDIRFFDENMGKNMYNFVADNINDIVRLTHDMKLTNKNGRPMFEKNRINYYGGATLIYR*	common_virus_hmm	common_virus	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0039	shell	direct	high	800	0.999	GCA_009378915.1_00669
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	164302	164940	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	50068	50706	GCA_009378915_1_12_145	GCA_009378915_1_12_145	-	264507	.	.	hypothetical protein	MKKLLKWFGIIFAVILGIGVIAVALETPEQKAEREAQAAEEKAQREAEYAAQIDDKEEVQPVNLGMTPQELGSGIDNIIKEISGVDPQLRSVSTNDNIYSVNLGEDIIWYGDLDKTGNIITSMYNVKISDNVEDRMMALLAFAIAKARTLSPDLPKEQVANSVAEVMSRAMKKFNQSLKPTTETQVIGDYKYIVNIYPDSKSMRFSVVHKDH*	.	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0040	shell	direct	high	638	0.998	GCA_009378915.1_00671
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	164981	165907	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	50747	51673	GCA_009378915_1_12_146	GCA_009378915_1_12_146	-	264507	.	PFAM:PF05766.11	HNH-endonuclease	MSDFFWLMAFIGFCFVILIVGIGIVVYIFNSISTLIKHKPKSYSEYKELRRKDREIAQENIKKLADYKERVMAICDKNFVSEDEIAELTNYINTNNLSSKQIDIYAHTAFKKHYAAIVSDNLLTDEEMESLTRVAEFLKPDKQLVKKELEELSHSVSLKKIQSGILPEAYTSAIILRRGEIAHFVIPAQLLEERVISRGYKGGSQGVSIRIAKGITYRVGQNRGKLVSEKGTIPVDSGDFVITNRRLIFTGTKKSFSYDYKKLLAWNVYSDGILLNIDNASSRMLSFSNNIDSDAIHLALAYLVDQNT*	phrogs_hmm	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0041	shell	direct	high	926	0.999	GCA_009378915.1_00672
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	165919	166467	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	51685	52233	GCA_009378915_1_12_147	GCA_009378915_1_12_147	-	264507	.	.	hypothetical protein	MKKLLIAGILSLSSLTVSAAQNDVQVDINKFINASNVVKNPFHADSALEYRFVNADNLNVRDYPVTGNVVGQLSRGEQVGVYAVSDSWVQISSGYTDSKWVSAAYLCEGAGCFEKSTKNTKNQRTANQSNSGSQPKNTTTKKSSAPKRTYSDGLCPCSGSYNCTGPRGGQYCITSGGNKRYR*	.	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0042	shell	direct	high	548	0.998	GCA_009378915.1_00673
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	166833	167294	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	52599	53060	GCA_009378915_1_12_148	GCA_009378915_1_12_148	-	264507	.	.	hypothetical protein	MAFDLTLLKKDAKMSAKREIEFDGLELTLEIQASEAFKRAAAEVQKIANTPKKVTKDSLKRDSQDEIGEYEAMLFILGEYCISQWNVTADGEPLAINGDNFLILLDQGFEKDKLTQFITLLFETYASLSQEFEDNKAKLVKKSTTATNGKKSG*	.	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0043	shell	direct	high	461	0.998	GCA_009378915.1_00674
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	167345	167491	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	53111	53257	GCA_009378915_1_12_149	GCA_009378915_1_12_149	-	264507	.	.	hypothetical protein	MEYITIIVDFMKYLIEKHGLFVIWLMVASLITLYKLDMILTAVHLFFN*	.	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0044	shell	direct	high	146	0.993	GCA_009378915.1_00675
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	167575	168483	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	53341	54249	GCA_009378915_1_12_150	GCA_009378915_1_12_150	-	264507	.	PDB:5NGJ_B	Tail-tube-protein	MSSGAFVKTAYAKQTGETLPKTGWKTLPNISNGLTVATELTNSEMLSGSRMAKAGMVTSASVQGDIETELMFGAYDELLAAAFWSEWSAGASPNTLSVGATKHQFAIAKDFSDINVNHVFTGCVVSSFGLSVDTSSLIKLKFGMTGLGYQESKTTSFAKTPTAQADTAKASGLSIGEIKVNGTKLDVCVESFSFELDNQTEVQKCLGDNIYGGNILAMLTNITGSMTIAYSQKAHEMISNQMTGATLSLELPIKFGNSKYVIKIPKFQVSGEIPSPSGTDLVTVDLSYTVVDESPVIEKHTA*	hallmark_hmm	common_virus	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0045	shell	direct	high	908	0.999	GCA_009378915.1_00676
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	168487	168675	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	54253	54441	GCA_009378915_1_12_151	GCA_009378915_1_12_151	-	264507	.	.	hypothetical protein	MPKNRHRQLLQLYGEINELGAILDCPKPKDIHPHEWILMKDQIYYMRQYYRVLKQRTDYTEN*	.	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0046	shell	direct	high	188	0.995	GCA_009378915.1_00677
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	168675	169136	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	54441	54902	GCA_009378915_1_12_152	GCA_009378915_1_12_152	-	264507	.	PDB:2L25_A	tail-completion-protein	MFGFFIALKMIDKTNRPLWRFFIGRNMNSFHIEQTLLTHIKSWQYFDDVPLAKENRNFKPPDGIWGRVTILGGINQVRSISDKPDILQQGTLVIQLFCPQDLGTVAIKQKADSLAQHLKVKQLGRLELLAPSIINAGFHDYYQINVSVAWRYY*	hallmark_hmm	common_virus	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0047	shell	direct	moderate	384	0.831	GCA_009378915.1_00678
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	169643	169843	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	55409	55609	GCA_009378915_1_12_153	GCA_009378915_1_12_153	+	264507	.	PFAM:PF16777.4	transcriptional-regulator	MPKITSTPKSQTQIQKESNERRGVKNKAFTLKLDDIELIKSLSKRLNIPQNQLIMDAVRAYQRQLD*	phrogs_hmm	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0048	shell	direct	high	200	0.995	GCA_009378915.1_00679
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	169840	170187	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	55606	55953	GCA_009378915_1_12_154	GCA_009378915_1_12_154	-	264507	.	PFAM:PF04883.11	putative-tail-component	MGIKWHKKMTVEPIADKIDDIYRKFAIDCYNNVIALSPVDTGRYRLAHHISIGKKSLNENGGGVELVLGIPKHTYPIIYIQNNLPYALRLEHGWSQQAPTGVYGNAFNSALGALG*	hallmark_hmm	common_virus	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0049	persistent	direct	high	347	0.997	GCA_009378915.1_00680
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	170311	170547	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	56077	56313	GCA_009378915_1_12_155	GCA_009378915_1_12_155	-	264507	.	.	hypothetical protein	MGLNAEISTEIAQAFDGDLKDAVKDFTGRRIILSDDDWAVNDTPPKYYLPSITAAGAFLQAFTPMRLIIRPSCNKIPS*	.	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0050	cloud	direct	high	236	0.996	GCA_009378915.1_00681
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	170771	171316	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	56537	57082	GCA_009378915_1_12_156	GCA_009378915_1_12_156	-	264507	.	COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ribosomal structure and biogenesis]. 	MSQFSDALIHIVLFSPKIPNNTGSIIRLCANTGAQLHLVKPLGFELDNTRLKRAGLDYHEYATLSVHDNWQETKSALKSLGVERIVAMTTKFSRPFYEYQFKLDNDQHKVALVFGSETDGLPDDVRADIGANHWLRLPMLPDSRSLNLANSVGICLYEVWRQLGFVGDVGQSVGYHKPTSR*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0051	persistent	direct	high	545	0.998	GCA_009378915.1_00682
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	171564	171704	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	57330	57470	GCA_009378915_1_12_157	GCA_009378915_1_12_157	+	264507	.	COG5510	Predicted small secreted protein  [Function unknown]. 	MKKVLIASIAAVVVLTGCNAIKGFGKDVSKAGEAVSDTAQKVEKKI*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0052	persistent	direct	high	140	0.993	GCA_009378915.1_00683
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	171768	172943	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	57534	58709	GCA_009378915_1_12_158	GCA_009378915_1_12_158	-	264507	.	COG0635	Coproporphyrinogen III oxidase or related Fe-S oxidoreductase [Coenzyme transport and metabolism]. 	MYPDLLDPAHIPLSLYIHMPWCVKKCPYCDFNSHALPSQAPFESYIEALLSDAVSQQSLVSNRQIDTVFIGGGTPSLLPIESFKRLFDGLRLIYDFAPTCEITLEANPGTLEHSPFDEYLTVGINRLSIGVQSFDHNALTALGRIHNPDQASHAIRAARIAGFDRVNVDLMYGLPNQNSLKAVNDIQTAIDAGATHLSWYQLTIEPNTTFYRTPPQLPDEEIMAEIETLGQSVLTKHGFYNYEVSAWHGPNDAPCRHNLNYWQFGDYLAIGAGAHGKLTLKNHPNYQDGIYRYQKSRLPKDYLAFENAPKMVNFERIADDNLPFEFMMNALRLKDGVSTDMFEIRTGLLISTIDNEMLPLQHQGLMVSDPLRIAPTRLGFRYVNHLVSQFI*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0053	persistent	direct	high	1175	0.999	GCA_009378915.1_00684
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	172957	174132	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	58723	59898	GCA_009378915_1_12_159	GCA_009378915_1_12_159	-	264507	.	PDB:1OYW_A	ATP-dependent-DNA-helicase	MTETTVKNFDDLPLSEPILKAVQALKFDQLTPIQAQILPHTLANQDAIGQAQTGTGKTATFLITIIESLLKRPFQADEIRYLGEPRALVLAPTRELAQQILADCRELTRFSQLYNLCITGGADFDKQLEQLHKRPLDILIGTPGRIIDWVNKGELFLDRVEVFVLDEADRMLDMGFIPDIKRIVRHMPSNTERQSLLFSATFNQDVMNLAYRWLHQPAFVEIAPESKTNQAIDQQFYLVTEREKMSALKQILADDSVKKTIIFANRKDQVKRLYDYLRRHHKVTMLSGDVAQQKRERYLQRFKDGEVNVLVATDVAGRGIHVDDVTHVINYTLPDMPDDYVHRIGRTGRAGLSGVSISFVGENDAFNLPALERHVDQKFKLNQFEFLDEHK*	common_virus_hmm	common_virus	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0054	persistent	direct	high	1175	0.999	GCA_009378915.1_00685
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	174163	174591	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	59929	60357	GCA_009378915_1_12_160	GCA_009378915_1_12_160	-	264507	.	.	hypothetical protein	MMKNKWMRGLAILALSLPTVTYAKTAAPKSPEAPKESLTQEEQMAIDFCDFSAYGVMHIAAEHQSGVTKSEALTNHDERMAKLRDIDPETATMLDQYWKGVIDRIFQESVQKTDAEKQAFVMGVGESSFYSCLDQVLKTPKN*	.	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0055	persistent	direct	high	428	0.998	GCA_009378915.1_00686
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	174929	175807	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	60695	61573	GCA_009378915_1_12_161	GCA_009378915_1_12_161	+	264507	.	TIGR02139	sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]	MPNQPIPLKNRARRVMPFFGLSMGISIFALGLLVILPFLMMILTTLQMGFDDIVRTIREPQVFAAIKLSLSMAMLATLTNLIFGTLVAWVLVRYEFWGKSFLNALVDLPFALPTAVTGIALATLYAPNGLFGQWFTRLGILLFDEPIKIAFTPIGIWLALVVVSFPFIVRAVQPVLAELSVEFEEAAAVMGASRLTTFFRVILPEITPAMLIGAGMMFARATGEYGSVIFIAGNIPMQSEILPLIIVSKLEQFDVAGAACVSLFMLLISLVVLFTINFIQWKLSARLGAKTN*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0056	persistent	direct	high	878	0.999	GCA_009378915.1_00687
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	175859	176698	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	61625	62464	GCA_009378915_1_12_162	GCA_009378915_1_12_162	+	264507	.	COG4208	ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]. 	MANTSSYSYQKNPATRDKPWVKWSLIGIAVVFMGVMLVVPLVSVFYEALKEGWQAYQEALLEPDALASIKLTLITAVIILPINTIIGVALAYLITRHQFRGKFVITTLLDLPFAVSPVVAGLMFVLVFGANTRLGGYLESMGIQVIFATTGIVLATLFVTFAFIARELIPLMQAQGDSEEQAALTLGANGWQMFWKVTLPNIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTVPLMIEIAYNEYAFTLAFALSSLLALLALVTLVAQGLMSHKK*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0057	persistent	direct	high	839	0.999	GCA_009378915.1_00688
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	176791	177510	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	62557	63276	GCA_009378915_1_12_163	GCA_009378915_1_12_163	+	264507	.	COG1118	ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]. 	MSIKIQNIHKTFGDFVALGDISIDISTGELTTLLGPSGCGKTTLLRIIAGLENADNGRIYFDSIDVTDIPVQHRGIGFVFQQYALFRHQTVAQNIAFGLTLLPRNTRPSANTIDRRVDELLDLVQLSHTKTRYPHELSGGQRQRVALARALATKPKLLLLDEPFGALDAKVRKSLRDSLKDIQREIGITSILVTHDQEEAQAISDKIVIMNHGQIEQIGTPSKLFAQPSSDFVVDFLGL*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0058	persistent	direct	high	719	0.999	GCA_009378915.1_00689
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	177552	178970	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	63318	64736	GCA_009378915_1_12_164	GCA_009378915_1_12_164	-	264507	.	PDB:3BH0_A	Helicase-ATPase	MAKSKSSYICQNCGAIYGKWAGQCTDCGEWNTLVEAPNTSLPHHHKSKTTTVPRKTANYAGAVSAVMTLDHVGVTLETRMPTGLGEFDRVLGGGLVAGSVVLIGGDPGIGKSTILLQTAINMASSNSLAGSALYITGEESLSQVAMRAVRLGLPTDRLRVLAETNVETICMALTAEQPAIAVIDSIQTLFTEAIQSAPGGVAQIRESAAVLTRYAKQTGTALFLVGHVTKEGALAGPRVLEHMVDTVLYFEGESDSRFRMIRAIKNRFGAVNELGIFGMTDTGLKEVANPSAIFLSRYDKPIAGSVVMVSREGTRPLLVEVQALVDTAQAQPRRMALGLDYQRLSMLLAVMHRHGGIHTSGMDVYVNVVGGVKVMETGSDLAVLLACASSIREKALPNRLCVFGELGLSGEIRPVPNGQERLKEAMKHGFTHAIVPRANAPAANHPQFKNIQIIAVDRLDEAIYQAFEITAG*	rep_hall_hmm	common_virus	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0059	persistent	direct	high	1418	0.999	GCA_009378915.1_00690
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	179268	181100	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	65034	66866	GCA_009378915_1_12_165	GCA_009378915_1_12_165	+	264507	.	COG1274	Phosphoenolpyruvate carboxykinase, GTP-dependent [Energy production and conversion]. 	MTAKITAPDFVRHQALIHWVAEIAALTKPAAIEWCDGSEEENQRLIDLMIKNGTMIKLNEDKHPNSYLAFSDPTDVARVEDRTYICSKEEIDAGATNNWVEPSQMRTKLNNLFDGCMAGRTMYVVPFSMGPLGSHIAHIGIEITDSPYVVVSMRKMARMGKEVYDVLGTDGEYVPCVHTVGSPLTEGQKDVAWPCNDDKYIVHFPETREIWSYGSGYGGNALLGKKCLALRIASAMGREQGWLAEHMLILGVTNPQGKKHYIAAAFPSACGKTNFAMLIPPAGYEGWKVETVGDDIAWIKPSEDGKLYAINPEAGFFGVAPGTNTKTNSNCMSTLGSDVIYTNVAVTDDGEVWWEGKTKEAPNNLTNWKREPHTGEERAAHANARFTVSAKQCPSIDPQWENPEGVPISAFIFGGRRADTVPLVSEAFDWVDGVYKAATMGSETTAAATGQQGVVRRDPFAMLPFAGYNMADYFNHWLQMGENLGKKAEAAGNQLPKMFKVNWFRRDENGDFVWPGFGQNMRVLQWIIERCEGTANAVRTPIGLVPTYDDINWDQSDFTKAQFELVTSQDKDAWIKELESHAELFDKLGERMPAALKAHNAKLKADIEQV*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0060	persistent	direct	high	1832	0.999	GCA_009378915.1_00691
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	181261	184155	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	67027	69921	GCA_009378915_1_12_166	GCA_009378915_1_12_166	-	264507	.	PDB:5EMI_A	Cell-wall-hydrolase-autolysin	MKKHTKSSISTQILKPLSLAISSCILVACSSTGTPTKPVSQTPKPIPQAKPSQQINISSGNTNLGNTNLGNTKTGADVDVLDVQMLDALEALLQATDMSMVEGDELAIQRYGNLWDRVRRGYRINEMTNARIEAQKSWFYTRQTYLDRLTARASRYLHHTVAEAERRGIPSELALLPIIESSYDPTATSNAAAAGLWQFIPSTGRIYGLNQSATYDGRRDVIESTRAAYDFLTSLYNQFGSWELALAAYNAGPGRVSRAIKANQDQGLPTDYWSLKLPTETMNYVPRFLAVAQIVRSPNTYGINLPAIANHSHFRTVPVNYGVSLSEVATVTGLSVSELRLLNPALLNFTVDEIGPNRIVIPDSLPNQIDNQLASLKGYGFGGDYIATAPAQSITYVVPKSGAAANTSSQQELIAANTLPTTIAQVTPNNTIVQEPALSKSEINLIAAEIQKTSPEVPAISPQDGNIQLNAVQTGQSVLDARGETKMLSFADGPKTQAITPPAQQPVQVSITPPAQPVQITVVSPTPEPISQPQPQLPPVTASIPVVSSPPVLVAPPPSRPRPEPASRPKPKPESYTVRAGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKPQPVSLQNPSRQSTSTANTNPTTHKVSAGESLTAIARRYSISLHALAKENGLSVTDGVLIGQTLKLPSDAKTANTTMANTSSSPSVNKPESYTVRTGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKPQPVSAQQPSQAAQSTKNNQSTQSTATHRVQSGESLTAIARRYNISLHALAKENGLSVTDGVLIGQTLKLPSDAKAESSTPSRLGNTKNNSTRTPANTNIGITENYTVKAGESLTMLSNRFGVAIGDLAAANGLASNANLRIGQTLKVPKLTTTYTVKAGDGLIALARRYGISTQELAKMNNLEPTADLRIGQVLTVPNK*	common_virus_hmm	common_virus	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0061	persistent	direct	high	2894	1.0	GCA_009378915.1_00692
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	184350	184955	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	70116	70721	GCA_009378915_1_12_167	GCA_009378915_1_12_167	-	264507	.	PF13474.6	SnoaL-like domain	MAYSFIDKYIEYKGWFMKYSTRSVLKKAVAASMLTAAIRSTIQFTGKSFGKGASIGLFIGMIGVQSLITTNAYAISEQDVSRYASSMSSAANAQNIAQISRLIADDAIISLSRGGKTTSLDKEGYLQLLQKSWATSSGYRYRINVADVVVTGNQARAQIVTTENWTQDGRPVTINTASRATFSQVGNHVVLLRSVSQVTID*	hhsuite_tools	hypothetical_protein	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0062	persistent	direct	moderate	558	0.921	GCA_009378915.1_00693
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	CDS	185043	186269	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	70809	72035	GCA_009378915_1_12_168	GCA_009378915_1_12_168	-	264507	.	COG4536	Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains [Inorganic ion transport and metabolism]. 	MPRPRTQNLVNFSFVSIAVFTVSVAAVFIPSTAFAAFELGGTPTNLALLIFFICLSLVVSFLCSISEATLLTMTPSYIDTLEEDNPKGAALLKSVKVDHIEKSISAILTLNTVAHTLGSLGAGAQAVIVFGNAWFGVFSGVMTLIILIGTEIIPKTIGTVYWRRFAMPVAYYVRTINVALLPIIWVTEKISRMLTRGNQEIGFNRHEFLALANQGESLGQMSEMETRIIKNSLALGMINVEDILTPRSVVSAFDENMTVGDVFASYPKLPFSRFPIFDADLDNATGFILKSDLLIAKANQEIHTPIKQFRRDINFVFAKMKLFDLLDLMLKEQVHIALAVGEFGEVKGLVSLEDVLETLLGLEIVDEFDRVDDMQILARQLMDRRMARLGAKLEEDTPFDEKSAGSNK*	mmseqs_cdd	nonviral_gene	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_CDS_0063	persistent	direct	high	1226	0.999	GCA_009378915.1_00694
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	49700	50077	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	1	378	GCA_009378915_1_24_40	GCA_009378915_1_24_40	+	186652	.	TIGR03012	sulfur relay protein TusD/DsrE. The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulfur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulfide moiety, delivered by the cysteine desulfurase IscS to TusA, then to TusBCD. The activated sulfur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulfur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulfur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulfur flux, such as oxidation from sulfide to molecular sulfur to sulfate. [Protein synthesis, tRNA and rRNA base modification]	MILLLVTSSPHSHAGKLAVEYATEQLHLGNQISVFFYGDGAYTANRLMWQTADVPSVAKQWQALSDNHGIALPVCVSTALARGVCDAQNAARHGLIGDNLLPPFSLAGLSELAMMIDDTISVVQF*	mmseqs_cdd	nonviral_gene	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0001	persistent	direct	high	377	0.997	GCA_009378915.1_01512
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	50087	50392	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	388	693	GCA_009378915_1_24_41	GCA_009378915_1_24_41	+	186652	.	.	hypothetical protein	MKFLIHINTDSELISYEAIALALTLATFDHDIQIELGEKVLVLLNNPKSRIYGMIQSLALYDLPKAYHNFQAVDALDKVIQLSLQSGSLALDDYDSKLYFK*	.	hypothetical_protein	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0002	persistent	direct	high	305	0.997	GCA_009378915.1_01513
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	50426	50746	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	727	1047	GCA_009378915_1_24_42	GCA_009378915_1_24_42	+	186652	.	pfam04358	DsrC like protein. Family member DsvC has been observed to co-purify with Desulfovibrio vulgaris dissimilatory sulfite reductase, and many members of this family are annotated as the third (gamma) subunit of dissimilatory sulphite reductase. However, this protein appears to be only loosely associated to the sulfite reductase, which suggests that DsrC may not be an integral part of the dissimilatory sulphite reductase. Members of this family are found in organisms such as E. coli and H. influenzae which do not contain dissimilatory sulphite reductases but can synthesize assimilatory sirohaem sulphite and nitrite reductases. It is speculated that DsrC may be involved in the assembly, folding or stabilisation of sirohaem proteins. The strictly conserved cysteine in the C-terminus suggests that DsrC may have a catalytic function in the metabolism of sulphur compounds.	MNHLPSLDDDGHLKNHTDWTPKIAQRLADTIGVTLESEHYQIIGEVRAFFETYHHSPSTRPLIKHLMARLPNLDISNQKLQQLFKTGLVARHVNRIAGLPKPPNCL*	mmseqs_cdd	nonviral_gene	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0003	persistent	direct	high	320	0.997	GCA_009378915.1_01514
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	50769	51251	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	1070	1552	GCA_009378915_1_24_43	GCA_009378915_1_24_43	+	186652	.	COG1607	Acyl-CoA hydrolase [Lipid transport and metabolism]. 	MSGFCTLNIASTDLTMTVLMTPDMANFSGNVHGGTILKLLDQVAYACASRYAGGYVVTLSVDQVIFKEPIYVGELVTFLARINHVGTTSMEVGIRVEAENIQTRTARHTNSCYFSMVAVDQAGKPVPVPPLVVDDSLAKQRYEMAKKRKELRIKLQQHDW*	mmseqs_cdd	nonviral_gene	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0004	persistent	direct	high	482	0.998	GCA_009378915.1_01515
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	51477	52670	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	1778	2971	GCA_009378915_1_24_44	GCA_009378915_1_24_44	+	186652	.	PDB:1Z19_B	Integrase	MLTEVWLKANNGKPRDKVTEIADRDGMSVRISPKGKIVFQLRYRFNGKLKRFDLGVYPLISLKQAREKSLSAKTQLLHGKDPKLEEQIAKQAYINADTFYECFLQWYNKSAVITKKQASDIKRSFELYVFPVIGSLPINDITLQQYIIIIESISEKTPGIAERILTNTKQMLKWAKKREIVKHNILADLELSDFNLVRVKRKRYLSDDEIILFYKALYGSKISYRNRLATELALMFGCRGIELRRAKITDFQDSVWTVPPENHKVGHITQQPLIRPILPPMQALIDEAIAISRSEYLFDRRGEMLEKNAFLDITTGLIHWIDRHCGVQLPRFTFHDLRRTARTNFSAFTSRDIAEIMIGHTVGNMQQVYDHYNYLPQQTAAYEQWLKKLAELKQIAL*	common_virus_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0005	shell	direct	high	1193	0.999	GCA_009378915.1_01516
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	52710	53366	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	3011	3667	GCA_009378915_1_24_45	GCA_009378915_1_24_45	-	186652	.	PDB:2MXZ_A	L-alanyl-D-glutamate-peptidase-endolysin	MSSYIRQIQTTLKEAGVYNGAIDGIAGKMTVEAVNSLANSKVLNSEEKRAVAEQAKSIPEYNKPTQELKPNVTNSGFVLGAKSLNNLKGVDDKLVAVVKRALQISPTDFTVIEGVRTVARQRELVKKGASKTMNSKHIIGKAVDIVPLVNGKISWDFNHYYPLAKAMAQAATELGVSVRWGGAWTVITGKSGTPQEWVASYRKGGGRFLDGVHFELPA*	common_virus_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0006	cloud	direct	high	656	0.998	GCA_009378915.1_01517
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	53441	53767	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	3742	4068	GCA_009378915_1_24_46	GCA_009378915_1_24_46	-	186652	.	PFAM:PF05106.11	holin	MNENDWLYFIVTLPYVIFLSLAGGLGAFIMRLNQSTEPKPLHVIFVKLLGELFLSGFAGLITFLLCKEFGLSSNMTAVAVAISGHLGGNTIILISDYLKDFFNKKFGG*	phrogs_hmm	hypothetical_protein	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0007	cloud	direct	high	326	0.997	GCA_009378915.1_01518
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	53834	54868	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	4135	5169	GCA_009378915_1_24_47	GCA_009378915_1_24_47	-	186652	.	.	hypothetical protein	MIFRTYTKQGQILLDSQTPVFALTKTAHLTRLLETPFDQNKRAFWYRAKRLGFNSKLRQGWANIHTPEYCMYYVDAPPAMSPITTISYDGNADGCEPIVFLNAGQFDGKTRLMFYSNGRLSDEQLANYRIHVFDINVQRQTQVGINLYDKQGNVTFSNQSRLLQLDIRTVDITALSKQELNDFFKMSEAFDENTKTFSYNEHMDARFYNYEYFLSLDSRYAHLVSKSMKEKLDTDFSKNGFIKMGQGYLEPDIIGSPGFGVDDLTIIENAVISDHTELPDDGGNNTTTVTLKTIKMASVGCRDGLFICPTVDFGDLSTDGTKQPVNTPSGVIKNKAIHIRYSRI*	.	hypothetical_protein	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0008	cloud	direct	high	1034	0.999	GCA_009378915.1_01519
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	54889	55233	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	5190	5534	GCA_009378915_1_24_48	GCA_009378915_1_24_48	-	186652	.	.	hypothetical protein	MMTGLKVWDRQGNLLTDITGRYPKLAHSLTIAERTNQTVSYTPPDGTELLVVPIYLGRNDESNRTNTATNEGENDAYTYNLWRVDITKTKDGFTITTYDHHQKIVPIKIYWGYL*	.	hypothetical_protein	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0009	cloud	direct	high	344	0.997	GCA_009378915.1_01520
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	55230	59654	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	5531	9955	GCA_009378915_1_24_49	GCA_009378915_1_24_49	-	186652	.	PFAM:PF13550.5	tail-protein	MNIHGSKKQKGQARKPTIATDDLVATSHAQIMYGLCEGEIAGLVDDGKSIRLENTPLINDNGEPNFEGVSWEFRTGTLDQTHIAGFPSVENEHNIGVELRHDRDWTRQINNRELSAVRVRLNFNALKEQKENGDITGYAISYAIDVQTDGGSFVEVLTDTVRGKASQGYKKAHRIDLPNAGTAKRWTIRVRRITPNRDSELVADTMSIDALTEIIDAKLSYPCTALLGISYDAKTFNNIAKIAVRLKGKIIQVPSNYNAETRQYNGLWDGTFKFAYSNNPAWVFYDLCTHKRYGLGERLSAMVDKWRLYQIGQYCDELVDDGKGGQEPRFTCNVYIQKADDAYRVLQNLASVFRGLSFWDGQNIVVDSDTPKDPVYTFSPANVVGGEFSYTGTRARDRHTLSKIAWDNPENNFTTEYELIPDEEAIAKYGVRTLDISAFGCTSKGQAQRAGLWALKAEQLQTQTVTFKTGLQGFIPQVGQVINIADNVFAGRAISGRIINVNGKQITLDRAAGKIGDILTVATADAIVSSQITAVQGEILTLKQALNVANESIWAVISDDLKLKQFRILTIAQNDDATFDITALEYNRQKYAAVDGGAVVTQEPFTVLKVATISAPKSVALTAHTRTHQGQAVTTLNIAWEQVSGAVAYIVEWRKDDGNWQTLPKVSGQSVDIDGVYAGVYQAKVRAIDAFDNESLSQSSQLTQITGKQGKPPRPINFTAQGVLFGMNLGWNFAKGSGDTNYTEIQVSPDGRSNIATLGTFAYPTNKHEITGLQGNLRQFYRARIVDKLGNTSDWADWASGTTSADADKVLGLLSGQISQSHLDQSLRTPIGKIGTIESNISGINRKIPTIESNISKINVDLPKLNQSIADERTRINSINQQLPTLNQSIANAQSTLNTAVASIETEKKRLSSAIIDINTLKQSNDAKTQELLNLSQTVGGYISSIRDLGATTGNLSQRYQQLKTTSDQHNTEITTIKQTQSGQATSISRLNSQMADKASSADLQSVQQTLTTADSSLSQRINTLQSDYNGNKASVQSSINTLTDTNRTQAEQLERLTTRFDGVLGGQNLLSDTTTKTGTQFLLGEYPINRTLQEGQRVIVKATTTPAQQVLVYNSSPRGANRIGEITADGTPHELTWAVGDGGNNSLHIYRTNINNRSSVTLDTVSLAVPDGALADVTANLAEFKQATADKDQATASRITSIDTAYKQADSTLTTQIESEITARTDADNSLASRINTLQSDYNGNKASVAGQLKTLSDKDNATASQISRLNSQMADKASSADLQSVQQTLTTADSSLSQRINTLQSSVSGQTASIRNVERSVNGVRAIKAVTVDNNGFISGYGLMSDLQNGRVTSRFGINADQIYFGSTTNAKKPFVFTTRATTIDGVSYPAGAWINSASIAHASINMLHIADSIQSDNYVAGRQGWRLFKDGRFELNNTFGDGSSLELNSQGLTVWYDKAQGKKAVELGILL*	hallmark_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0010	cloud	direct	high	4424	1.0	GCA_009378915.1_01521
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	59663	60265	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	9964	10566	GCA_009378915_1_24_50	GCA_009378915_1_24_50	-	186652	.	PFAM:PF06805.11	tail-assembly-protein-I	MKTIQLHGILAKKFGRFFKLDVKSAKEACHALACQIPAFGQFMADSEQLGYRFAVFNGKKQNQKTNIGENQLNDITTANHIHIVPKVIGSGGKALGWIQVVVGVALIATGVGAGIGAGLTLSAAVAANIGMIGAGAGLLLGGVSALMMPTPKLDVANEDGNKPNNGFGGAVTTVAQGNPVPILYGERDVGGFIVSAGISV*	hallmark_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0011	cloud	direct	high	602	0.998	GCA_009378915.1_01522
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	60262	61044	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	10563	11345	GCA_009378915_1_24_51	GCA_009378915_1_24_51	-	186652	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MRLTKNLQQQIITHAQDVYPNECCGVIIDGQYHPCANIAPDPANAFEIDTAEWVILSNRGDIEAIVHSHPNGEPLPSEVDKVQMGLHDIDWVIVGLGHTPTGATYCDIKRHKPTTYQSPLLGREYYHGVQDCYSLVRDYYHRELDITLPSFARSDDWWENPNHEPLYENNFTKAGFIKVQDKNDLQKHDVILCRVGRTHHVNHALIWLGDDGALKSETTPDCVGNALILHHPHGRLSTREIYGDSWQRRTALIVRHRELS*	mmseqs_cdd	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0012	shell	direct	high	782	0.999	GCA_009378915.1_01523
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	61429	61632	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	11730	11933	GCA_009378915_1_24_52	GCA_009378915_1_24_52	+	186652	.	.	hypothetical protein	MADKASPQARKKATANYFDKSLARIGLVISHTEPHVLDALNQIMAHKDCSKAMAIKTALVEYAKTLD*	.	hypothetical_protein	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0013	shell	direct	high	203	0.995	GCA_009378915.1_01525
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	61629	62291	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	11930	12592	GCA_009378915_1_24_53	GCA_009378915_1_24_53	-	186652	.	PFAM:PF05100.11	minor-tail-protein-	MSFNTDIQQTTVQGFITLYELDARKLGGEIYRFHGHNDGVIRWQGQDFHPIAIKADGLEMRSDGRASTPTLIIHNDIGGIPQALRFLCLKFGDFVGAKLKVIHTLAEYLTSADEQNFKIQNWYIEQKTSQTNVTTTFELSNPVDFEGQKIPVRQITSYCHWAVCGRYRGEECGYIGTNRFTTDGKPTDNPALDRCGGRMTECKLRDNEQRFGGFPAAGLV*	hallmark_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0014	shell	direct	high	662	0.998	GCA_009378915.1_01526
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	62438	62827	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	12739	13128	GCA_009378915_1_24_54	GCA_009378915_1_24_54	-	186652	.	.	hypothetical protein	MSETTLTELSRTEAQVLQSFIAQVDFWKNQHGDKASIIEVIYYPEDDGFEVANGEPNNGVLKRNRTTVFRADLLAWASNQLRYLQGYDNSQTVTEFSLSYKNDRYGVRASFASEAKTADKADDGAEQTQ*	.	hypothetical_protein	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0015	persistent	direct	high	389	0.997	GCA_009378915.1_01527
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	62925	63227	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	13226	13528	GCA_009378915_1_24_55	GCA_009378915_1_24_55	-	186652	.	PFAM:PF05939.12	minor-tail-protein	MGASASVHHNISKTQFGDGYAQRISHGINNRRTDWVGAKTGDWQTVILPIKTFLDEHKGVIPFLWTNPHGQTKKYVCENYEISQKKGNFWQIGLKFEQVF*	hallmark_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0016	shell	direct	high	302	0.997	GCA_009378915.1_01528
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	63199	63354	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	13500	13655	GCA_009378915_1_24_56	GCA_009378915_1_24_56	-	186652	.	.	hypothetical protein	MGKQEFNFYQDKLKIKTKSHKPTDIGRFFVGVKNENLHLENEHGSVRQCSP*	.	hypothetical_protein	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0017	cloud	direct	high	155	0.994	GCA_009378915.1_01529
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	63347	66895	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	13648	17196	GCA_009378915_1_24_57	GCA_009378915_1_24_57	-	186652	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MSQVLERLQILLHADTARYQRDIKKASSDTKREFESIKTSAQSMAGYVKSALAGFGAAAAVSSVIRTADEMRTMTNVVRLNTQSHQEYKDVLLQLKTISNDNLTSIGSTIELYGSSKSALDELGKSQQDVLLFTENITKAMAVGGGSAASQQAALVQLAQALNMGALKGQEFNSVASQAPAILALLKSELGATTAELKDMAAKGKITAEVIYSAVAGASAELDEKLAQMPITVSGAMNVVKNNYKSIVNEIMNENSALTTTLAESVKWVGENLASLSIAAGAVGVVWGGLLIKNSALVTGFTAFVGAQVAATKAAAVNAFTVQGQAQAYNTLQTRLMLLRLTKAHYIDLTKQSVVAVRSNTAALLAQARAMSVATAAQRAAAGAAILTANAVSKVGGGMMALGRIIKAHPLMTLAAVLSAVVVSTHGMTGALESLSDAFGVTTLMAKDFIVFVGDGFSMAWDTVSAFADNMLAKVGDTTKGSTGAFSNFFATSHGGFVGMLQVAAKTFDLINAAAKAGAQNALHNFVQLGKATQNIFIGIGNAFVSTIEFMINDMTRKIDWLSEKANAVAAFLGMESRLPLIGKVNLGRAQYKAVDFGVVASIADSNTHSAYNYVTALADQTVAARQAAQSNSGLASSYGGVGDAAKKAADDASKSGKKVKDAASELSKALKKLFDETMADLQHSNWELEQPFVSELAKLERDINSGKFNVTIDSVTSGLSEQALNALRDEARRLDRNKARSFLDNMQREHNKEISLALSNGSKYLEMLYDINDANNSLSLAIDENKSIVLNSLANYEATKASIEMLKTIKDAKDEFSLLSIPDDLDRQLAEIGQQTARTIKQYQYLIENGYEAEYELVKTTAKQLEAAQMRNAVQEKYNQLVKESKSDVEQQTDNLKEQILILSEYAAQMKTGLDIGHAQSLIGDAIGLSEQTSLYDELDKERQSRHTILRAGVDQMLQNERLTEEERIKIKEWGIAERLKIEEAYLTARNQMVINDGESMFASLASITKDSLGEQSKAYRAMFAIEKGFAIARSIMAIQTALANASASGPFPANLGMMATVASQVASIVSNIKSVVMPVGQAHDGIMSVPKSGTWNLEKGERVLPRHTAKALDDKLDKIDTGGRPVNVVINNYSGEKTDVQHMPNGDMMVTIGKMIDNKVDARVNQRFIQARRQGGELYG*	hallmark_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0018	cloud	direct	high	3548	1.0	GCA_009378915.1_01530
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	66897	67226	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	17198	17527	GCA_009378915_1_24_58	GCA_009378915_1_24_58	-	186652	.	PFAM:PF06223.11	tail-protein	MRRFLFKLAAHLGRTIQELEQSISYAEFIEWMAYDRLDPIGGYRHDLQTAHILSVLIGSKGKMISDYLPIDPNPMTDDQRQAYEKARKKAKLDAQMSMLIRHLSKSCGE*	phrogs_hmm	hypothetical_protein	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0019	cloud	direct	high	329	0.997	GCA_009378915.1_01531
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	67238	67612	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	17539	17913	GCA_009378915_1_24_59	GCA_009378915_1_24_59	-	186652	.	PFAM:PF16462.4	tail-assembly-chaperone	MTLRNNILNIAKKPSLVKLEIPELEGEVYIKSLPLAERLEYEKSIAEQTSDDADAQADSKYNITPHILTFIYHVCDEKGKLLFTQDDIEALSGLPYAIFRKVNEAVVEMTFGSRPKTVEQAEKN*	phrogs_hmm	hypothetical_protein	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0020	cloud	direct	high	374	0.997	GCA_009378915.1_01532
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	67665	68111	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	17966	18412	GCA_009378915_1_24_60	GCA_009378915_1_24_60	-	186652	.	PFAM:PF16461.4	tail-tube-protein	MSDTETGYTDSHFIWKVSTDEGENYKKVNGLQSLPIPDTSKVTDEITTTDATNPQFDVVNYTESDAVEFEIVFNPSDPVHVALEKAKDDGSVVKSQIHFIDKRVKGFEFECKISKFTYDASDVKQKMRVNGTMTYTGDIKRITSNPTA*	hallmark_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0021	cloud	direct	high	446	0.998	GCA_009378915.1_01533
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	68137	68505	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	18438	18806	GCA_009378915_1_24_61	GCA_009378915_1_24_61	-	186652	.	PFAM:PF05657.10	tail-component	MNASEIIYQTLSQIVDGKVYPLLVPESDSLSVPYLVYTPVSSVPVQTLDGISGDEWVRVQIDIYHSDYDVLLSLYNQVISALQNKISLKVFGTSNQSVDDGLYRMMFECEFWSKNQILPTAP*	hallmark_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0022	cloud	direct	high	368	0.997	GCA_009378915.1_01534
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	68551	69168	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	18852	19469	GCA_009378915_1_24_62	GCA_009378915_1_24_62	-	186652	.	.	hypothetical protein	MILPSLAVAQSAYSNQTKQNLYTSSIPTNPDDVINSIIQNSIIQSSQQTIPTYQIQTIPTYQINPGWSYTLIENDFDDNVFRTARALSKDLNAMLIVSYNNKDKSYQNPIVGVQLSGDIDGRVWHTFHCMQTCPTIDMNVDGKKYQNMGTEDAGYLTLAFKNPKTVLNRIKNGETIKIRINQYRNELYYEFNIADQFSIDQLKQQ*	.	hypothetical_protein	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0023	cloud	direct	high	617	0.998	GCA_009378915.1_01535
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	69253	69744	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	19554	20045	GCA_009378915_1_24_63	GCA_009378915_1_24_63	-	186652	.	PFAM:PF04883.11	tail-component	MIGRIKIKGLKELEKKLANLDNATSGKALYSALNAAATPMVKTAKERAALAPEPHKMAYGKSGYVKVEPGLLKSAIRRRRLKRKEYTAIKQGAAIGIYIGKGTKQKLYPRYWHFIEYGTRKMPATPFIRPAFDENKEKSVEIFAKKLKSNIDKALNVSTWLPE*	hallmark_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0024	cloud	direct	high	491	0.998	GCA_009378915.1_01536
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	69704	70066	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	20005	20367	GCA_009378915_1_24_64	GCA_009378915_1_24_64	-	186652	.	PDB:2KZ4_A	Head-tail-adaptor	MRASQLRHSIKVHQKTISRSATGAVTSKWAHILTLYAQFTPLSVKDVITGQAAGTDITARAMIRHRDDIDHTMRIEHGGRMFEIVGEPLADNGSGKEYLTLMLKGVTDDRKNQNKRSKRA*	hallmark_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0025	cloud	direct	high	362	0.997	GCA_009378915.1_01537
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	70075	70371	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	20376	20672	GCA_009378915_1_24_65	GCA_009378915_1_24_65	-	186652	.	PFAM:3JVO_G	Head-Tail-Connector-protein	MSYANLEEVKAHLRYDDDNSDAVLKAYLDASTALIDSYITDAATDSMLPALKAASLLLCGYLDDNRNAESVANMTPSMSAMPLSVEMLLKPYRTPTAV*	hallmark_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0026	cloud	direct	high	296	0.997	GCA_009378915.1_01538
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	70352	71791	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	20653	22092	GCA_009378915_1_24_66	GCA_009378915_1_24_66	-	186652	.	PDB:3KDR_A	Portal-Protein	MGFFDFFTRKKSLSAPSAGRGWLPLTVDEPFTGAWQMNCELHRTDMLSYHTVFACLSLISGDIGKLRFVPKSRKDGVLQQTASRIDRLLGKPNSMQTWQQFAECWILSKLSHGNTYIYKQRDIFGDVWQLVVLNPERVTPLISDDGQVFYRIHRDKTHGITGLTLPASEIIHDRFNCLYHPLVGISPITASAISISQGSAIQASQTTLFQNAARPGGVLSVPTAITREKAEEIKMHWNKTYQGLKQGGIAVLGDGAKYEGITMSSSDTQMIEQLKMTAEIICSVFHVPAFKIGIGTIPAGQKVSDLNEIYYSDCLQALIEAMENLIDSELLGDGIEIEADLSSLIRMDGASQMAYLKEGTLSGIMSPNEARATLGLAPVVGGESPLMQQQNYSLVALARRDSPDNSLNTMPNIAQNDAKAALMSHYKGVFSSDVAYQVGDFVTRNGSLWHCKSACQGDFNHENWTLAVKKGATDELCKP*	hallmark_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0027	cloud	direct	high	1439	0.999	GCA_009378915.1_01539
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	71797	72048	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	22098	22349	GCA_009378915_1_24_67	GCA_009378915_1_24_67	-	186652	.	.	hypothetical protein	MLIEYLKNAPGAKAGDVKKIADHFAKVLILTGYAKRSTQDEPSVVNGDLLSENDADNEDLAVQQVPAKPKRTKKTTKTDTDTE*	.	hypothetical_protein	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0028	cloud	direct	high	251	0.996	GCA_009378915.1_01540
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	72143	73465	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	22444	23766	GCA_009378915_1_24_68	GCA_009378915_1_24_68	-	186652	.	PDB:8ECN_B	Major-Capsid-Protein	MNLQKQLQAVIATLKAKRNDIATLMTKAYAHGRTPDDDEEAQIAEIEIDIAKLEKNADRLRALIKAVQTEATPVAGDTPEESAATAEGDTEPKKALNMTQNLEKGIGFAQMAKAKALSARMAKQGSYVTPAEIAKSQGMHPLVVDVLEKSAQVMTTDNAKPLVPITQFTGDFIELLRTKTIVDKLAKHMRVAPPNTTIAGMATGATSEWVGEGAKKPVTNATFNTVEIKAHKLAGIAILTDELLKRNSYNADKMVLNDLIDSSTQLIDSTFIDDQPQTAVRPGGILKGATQIESTGADATAIKADLAKLRLGFIGKNLSLDGAYYIMSESRACQWAELTNPLGAPEFPGLQASTGQKTLNGLPVVESETADDVVILVKPSELYLSDEGDVEIAYSDQATIIVNETPVNLWQENKFAIRSERYITWAKRRPIAAASIKYTE*	hallmark_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0029	cloud	direct	high	1322	0.999	GCA_009378915.1_01541
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	73462	74070	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	23763	24371	GCA_009378915_1_24_69	GCA_009378915_1_24_69	-	186652	.	PFAM:PF04586.16	prohead-serine-protease	MTKAYSTLTVKSVTDNDDERIITGIASTPSTDRDDDVLEPMGAKFALPIPLLWQHNHNQPIGEVVDARITEKGIEITAKIAKIDEDGKLKSRVDEAWQSIKSGLVKCLSVGFKIKEYNYFDNSWGLHIKEWEWYELSVVTVPANPDAVISSVKQIKQAFADSPAMREQPAKTAPDTAPASVLAEPKKTYVTLIKPNEAGVKL*	hallmark_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0030	cloud	direct	high	608	0.998	GCA_009378915.1_01542
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	74120	75829	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	24421	26130	GCA_009378915_1_24_70	GCA_009378915_1_24_70	-	186652	.	PFAM:PF03354.15	Large-Terminase	MTQITWTTALPDWQARIVRGESMVPDKPLFDTPAQIALKVFKELKLVDVIGSPKIGDVTRQWVYDFVMAIFGAYDPVSKRRLIKEFFLLISKKNSKSTLAAGIMMTALILNVRHSCELAIIAPTKEVANNSFLPMRDMIRADAELSAMFNISEHTKTITHLGTNATLKVIAAENDSVAGLKATYVLVDELWVFGKRQGADSMLREAKGGLASRPEGFVIYLTTMSNESPAGVMKEKLDYARMVRDGEVHDPEFLGALYEFPRIMLEKQKHLDPKWWYITNPNLGASVDESYLLSDYRKAKVAPEKSVLQDFMAKHLNVEIGISLRANRWAAAEFWTSAGKAFTLDELIERCEVITIGGDGGGLDDLLGCAVVGRLPDVKAIIDDDTGVRHEVKEWLVWGRAWCHPIALERRRQDEPRYRDFQSDGDLVIVDRVGDDTAEFAEIARRIYDSGKLDRIGLDPLGVGGIVDDLLAVGIPQDKILGISQGFKISGYQKTCERKIASGDMYHANQPIMAWCVSNARVLVKGSGTMLSKAESGSGKIDPVIAMLNAVALMSQNPQVQSTEVSVYF*	hallmark_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0031	cloud	direct	high	1709	0.999	GCA_009378915.1_01543
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	75832	76344	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	26133	26645	GCA_009378915_1_24_71	GCA_009378915_1_24_71	-	186652	.	PFAM:PF11753.7	nucelotide-kinase	MTKSNHDVVNQPKHYTSCPSGIECIEITELLPFCLGNCYKYLHRAGLKGKFKEDMEKARYYANRALFNGETMSNTVKSRISYVASHEDANNAELLKLFKCWDVDGDGRLTHVFIDRLTKTIDSVFSINTSRYPTSLTKSLDEFRTNLENMNNAAIEQHKRNANRITLKDD*	common_virus_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0032	cloud	direct	high	512	0.998	GCA_009378915.1_01544
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	76522	76989	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	26823	27290	GCA_009378915_1_24_72	GCA_009378915_1_24_72	-	186652	.	PDB:2CMP_A	Small-Terminase	MAKKDIEIYCRCIALDMMPAQALTEAGYKTDNPDSVRRQHDNLQKRAAIQSRIKELKQYFADHPHLAKPTIEPDDKKPVVQKQLSAKEYLLQTLNDAGQEPKLRLQAAVALLPYEEAKIAPKGKKEDAKDVAKNATTTGKFATMDHQAEFFGVMN*	hallmark_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0033	cloud	direct	high	467	0.998	GCA_009378915.1_01545
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	77086	77406	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	27387	27707	GCA_009378915_1_24_73	GCA_009378915_1_24_73	-	186652	.	PDB:5H0M_A	HNH-endonuclease	MKPKLNTLKPRLSSHQPKARINWGNGCGGRPWRRNRDEALLRDLFTCQHCHRVFNPSMLEADHIINRAQGGSDDLSNLQTLCKPCHKIKTQKESQAGGVKKFEFSN*	common_virus_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0034	.	unmatched_CDS	none	0	0	.
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	77541	77972	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	27842	28273	GCA_009378915_1_24_74	GCA_009378915_1_24_74	-	186652	.	.	hypothetical protein	MRYATPSPSHHHLIAAAESFAKVDDFADACYRYYFYGDQICRTKLSSCLPKNMAEELKAVPTKYHQVVVDAALEEISYPLKSGERPAFCSKDRSACLGVSRAQYYRIHADQAITAIIAYITTSAEDVANCVRQQLSKKCEFGY*	.	hypothetical_protein	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0035	cloud	direct	high	431	0.998	GCA_009378915.1_01546
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	78332	80974	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	28633	31275	GCA_009378915_1_24_75	GCA_009378915_1_24_75	-	186652	.	PFAM:PF08273.11	primase-helicase	MTDKRTPLDFESIRARAEGYYIDRIFPAVGINFTKAPHLHQPCPLCGGKDRFRCDDKDGSGSYICSQCGAGNGYTLVRDYTKSDAYEAHALIADILGIDGGKPISNQDRAKWQQARAEKDSANNAAKAKIRREVASIAQDRFAKAVIATNHPYLAKKGVMSHGLHIDDAGHLLIPLYYHNTKTGNITLCNLQTISETNDKRFLKGGLVNECFYTLGTVPVGNGVIFVTEGYATGASIYEAMGHSYPVIVTFNANNMIKCAPIVRALYPAHRIIFCADDDYATAQKMGKNAGIDAGQQASSLAKAEYISPDFGGDERTITGDLTDYNDLHKEFGLAVVNAQISHALNRPMPEQSQLKTSGVTLDALLEQYAVIDDIGKRTNKIYHLSEQKELTKTQFDEVVGDKQLANQWHYHPNKKTITRQQVQANTSKLTAEIYADIFDKYWLIAGTKEIYNREDKIRQPADTLRLEYPLEYDIWLKSDRRQKVKQTNIWFDPSCTKRPINPDDNYINTFDRLPLTPFSREELHDMMGDNNASDEQIEAFLYGLASPFINLLRHLCGDDGSDEVVNWILNWLAIPLQNMGTKMDTALIFHGHVQGAGKSFFFDRIMRRIYGSYALTLGQGQLVSQYNDWVEGKLWTVFEEIFESKDRFNHMGMIKQLITGDTIWISKKFLNGWMQDNYVNVVFLSNDLQPLSLEQTDRRHVVLYPKQTMPIELKTALSDALMDADDMMVRAFYSYLIVKNVGDQDAYTRAIHTTAKQHLQELSMFNYERFYNDWKDGKLDIPYATCRTEDLFNYYAFLCGNDKEKATSKTRFGTFIGKREEKRVVRYLPENFKGPKTPQATVIIVRYTNTPENPDQRWFGQALGSFQEKVRQIIGKQQQ*	rep_hall_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0036	cloud	direct	high	2642	1.0	GCA_009378915.1_01547
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	81079	81294	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	31380	31595	GCA_009378915_1_24_76	GCA_009378915_1_24_76	-	186652	.	PFAM:PF10078.8	transcriptional-repressor	MLFNEFWRALGDEEKVVFAEKCGLSQKYIAIHLVYGYKSPRLGTLQRMADASEGKLTFAELCEFFKPKSAK*	phrogs_hmm	hypothetical_protein	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0037	cloud	direct	high	215	0.995	GCA_009378915.1_01548
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	81441	82094	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	31742	32395	GCA_009378915_1_24_77	GCA_009378915_1_24_77	+	186652	.	pfam00717	Peptidase S24-like. 	MLKSISEIRLQNVEHLMRIYNIDRVAFAERAEINGSQLSQYFSGNKIIGDSVASRIEENFGLPKYWLDQNRSDSRSVKTVRNVPILTWVKAGLFHETGELQYDKTEPVYDEAYPQDIYWLTVSGDSMMPRFHEGDLILVDPNKQPCVGDFVVAIKLDASGGYEDAMTFKKYREGFDDKLCQMYYQLVPLNEDYAIIDSRHTPFEVRGVVLERKEKFV*	mmseqs_cdd	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0038	cloud	direct	high	653	0.998	GCA_009378915.1_01549
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	82104	82958	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	32405	33259	GCA_009378915_1_24_78	GCA_009378915_1_24_78	+	186652	.	PDB:5M1S_D	DNA-polymerase-III-subunit-alpha	MANRFAVVDVETANSDVSSICQIGIVVYENGRLTESWSSLVNPQTDFDWMNIFVHGIDEDMVADAPTLDELKPTLERLFTDTVVCSYSAFDRRAIGKNYPEMVQNYPWLDIMRVARYTWREKFFNHGYGLANVTETLGIMMDKHHDALSDAKAAAEVLLQATATENRTPHDWIDAVRYRAPKLPTRDEQAINEDGDYIGSVCVFTGELSLVRSEATRLANDAGFAVAPSVTKKTTHLIVGVQDPTKLKGSQKSSKERKALELTQKGQNIVFLTEQDFFDIIQSD*	common_virus_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0039	cloud	direct	high	854	0.999	GCA_009378915.1_01550
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	83157	83327	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	33458	33628	GCA_009378915_1_24_79	GCA_009378915_1_24_79	+	186652	.	.	hypothetical protein	MTDTAKSLTRLLVTVLITAAFVYSCSNALDRQAEADYQQCLSWQSNGYSLNCKKGY*	.	hypothetical_protein	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0040	cloud	direct	high	170	0.994	GCA_009378915.1_01551
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	83329	83613	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	33630	33914	GCA_009378915_1_24_80	GCA_009378915_1_24_80	+	186652	.	.	hypothetical protein	MIEQTETIIDNLLMRMSDLDRYSDDEIVICNTDLHMFDVVVCCETGGFGVIRDASIESLLRMDRPVRTIFETEAVEARKALREYLPILMMMGLL*	.	hypothetical_protein	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0041	cloud	direct	high	284	0.996	GCA_009378915.1_01552
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	83733	83906	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	34034	34207	GCA_009378915_1_24_81	GCA_009378915_1_24_81	+	186652	.	.	hypothetical protein	MGGEIDLEALFTVYCQINWLIDHVHEIRDKQVTPSQKLFLAQAFAYLFNTYEQQRGV*	.	hypothetical_protein	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0042	cloud	direct	high	174	1.0	GCA_009378915.1_01553
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	83906	84691	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	34207	34992	GCA_009378915_1_24_82	GCA_009378915_1_24_82	+	186652	.	CDD:cd16404	pNOB8-ParB-like-protein	MSYIQTKIVLITPELAREWMSLNTKNRKISDRVVSAYAKDMLDGKWELTNQGVGFYEDGTLADGQHRLQAVIKSGKAVQMLVTTGMQKSSLLAIDSHRARSASDVLTLGGNVGLVTTNDVAVIRLVTGLNHRLTNHQLEDLADQYIGDIREIGAYFPNSNMRKAVIIAALVMAKNAGVCSDILKKFVNVLVTGICHEHKDQTIIILRDKVIKGEFSKGGSSAREDYLNKIQNSINNYAQGRVMQIVSNTKKLTYPYLPYNK*	common_virus_hmm	common_virus	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0043	cloud	direct	high	785	0.999	GCA_009378915.1_01554
GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote	cenote	CDS	84709	84906	GCA_009378915.1	NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915.1_NXCW01000007.1	GCA_009378915.1|NXCW01000007.1	GCA_009378915_1_24	GCA_009378915_1_24@C1	35010	35207	GCA_009378915_1_24_83	GCA_009378915_1_24_83	+	186652	.	NF033499	excisionase Xis. Members of this family are excisionases such as Xis from the Gifsy-1 prophage of Salmonella enterica subsp. enterica serovar Typhimurium str. LT2.	MKKYLTSNEICEIFGICKMTLNRWEKRYPHGEPFPRPVMGGGLGGGVKRYLSQEVHAWELKHTAK*	mmseqs_cdd	nonviral_gene	C1	35207	49700	84907	GCA_009378915.1|NXCW01000007.1@region_49701_84907@tool_cenote_CDS_0044	shell	direct	high	197	0.995	GCA_009378915.1_01555
GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote	cenote	tRNA	128961	129047	GCA_009378915.1	NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915.1_NXCW01000002.1	GCA_009378915.1|NXCW01000002.1	GCA_009378915_1_12	GCA_009378915_1_12@C10	14727	14813	tRNA-Leu	tRNA-Leu	+	264507	.	tRNAscan-SE score: 55.3	Leu	NA	tRNAscan-SE	.	C10	72035	114235	186270	GCA_009378915.1|NXCW01000002.1@region_114236_186270@tool_cenote_tRNA_0001	.	.	.	.	.	.