core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	170695	170802	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	1	108	GCA_009379155_1_9_160	GCA_009379155_1_9_160	+	333689	.	.	hypothetical protein	MTDKMREAYEAIKAEQALQRQSEALMCMFDRLEKA*	.	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	170832	171236	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	138	542	GCA_009379155_1_9_161	GCA_009379155_1_9_161	+	333689	.	.	hypothetical protein	MMRLVMFGIKLLHSDDFIKSASSFGCFLAIMDKQTNKNHVYNLSTQVQRFELIDIDQVANLANSVQNGAISATVGTLLVRAGVLPALVALSIGAGLPNRTKDAYVCHIEFDDSKSAILLQLSKHKYQQFLKHIA*	.	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0002	shell	direct	high	404	0.998	GCA_009379155.1_00612
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	171299	171505	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	605	811	GCA_009379155_1_9_162	GCA_009379155_1_9_162	+	333689	.	.	hypothetical protein	MALAINIVLGANTVHFSRNIQKATQNAKKYLQGFALLAYMQAADKDKSVQDFLIIDPNPMTDEQKSLY*	.	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0003	shell	direct	high	206	0.995	GCA_009379155.1_00613
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	171534	172439	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	840	1745	GCA_009379155_1_9_163	GCA_009379155_1_9_163	-	333689	.	PF14337.6	Domain of unknown function (DUF4393)	MTAETFHLIPAITGAVSGAASVGLLNGPLQTLQDIWFVVYGHKWHYKVESIKAQQAMNIQAMQNNIQTGIEKIPANALKDPNVAIIGPALEASRFHMNEENIREMFANLIVSAMDERKDGQMHHAFVEIIKSLSPLDAKNLKYLNQDSAKNISPIANIIRQESNSYHMLYQHVFLGNPEVSDQDLIAPSIDNLSRLKLIDITYNDYLTDDSEYESFYHSAPYQEMTSALNKEHEALNLDISILQNPDLKIEFEGKILNKDERSEKLDQVMKGLESKIEIQKGVIKLTAFGKNFLSVCSPTT*	hhsuite_tools	nonviral_gene	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0004	shell	direct	high	905	0.999	GCA_009379155.1_00614
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	172491	173195	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	1797	2501	GCA_009379155_1_9_164	GCA_009379155_1_9_164	-	333689	.	PDB:2FJR_A	Repressor-protein-CI	MQDFSIRLNQAMSAKNLSLRDLSEKTGINYEMIRRYSKGQAKPRNDKMKLLAQCLGVPITWLDYGEGEMTKNNDKLTPITEWDDSTPLDDDEAEIPFYKDIAFACGHGAVNDDVTHETRKLRMGKRTLSNLGVMPENAFAVTARDDSMTPYVQDGDTIYIDKGRKEVKDGRIFAIRFGELCLCKRLYRLPDGGVRIVSDNAAEFPEQVATKQQISDGEFEVIGWVWSVSRLERW*	common_virus_hmm	common_virus	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0005	shell	direct	high	704	0.999	GCA_009379155.1_00615
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	173594	173962	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	2900	3268	GCA_009379155_1_9_165	GCA_009379155_1_9_165	+	333689	.	.	hypothetical protein	MNEFIIPNSNSVSNDFNYSRTDLDAQEQQIAEFIKKGGKVINLDNSEQPKKKSAKKRDFNNQRINSKMHLVLCYLKRSGKRMTGLQIQEKFGISATTLGSQTRLLNAQASKQYNQNSNPSRK*	.	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0006	shell	direct	high	368	0.997	GCA_009379155.1_00616
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	174265	175269	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	3571	4575	GCA_009379155_1_9_166	GCA_009379155_1_9_166	+	333689	.	PFAM:PF06152.10	minor-capsid-protein	MKHLINLERFKVHLANKFKTTLNEIDEFLQLVVFRHEISELNYKEFELLIGESKQKLLGFLAGYALELTQDWQELYDYSYTLETKMIDDDKPDTLNMNEPQFDADSPIKLSAQVGVTLNQILAKFGDEQSTKISNAISYAYANGLPNQELVRIIRGTRKNRYQDGILAITTRHAKTIAHTGTAIVANQAKQQFIHDNKDIIKGIKVIATLDLRTSSICRGLDGVFMPLDKARYPPYHFNCRSSFEIVYDGYQTPKQRASMDGVVKNQTYYEWLKNQPAQYQDEVLGKTRAKLFRDGGMTVERFRALQLDKYFTPLTLEQMRALEPKAFKKASIH*	hallmark_hmm	common_virus	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0007	shell	direct	high	1004	0.999	GCA_009379155.1_00617
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	175322	175972	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	4628	5278	GCA_009379155_1_9_167	GCA_009379155_1_9_167	+	333689	.	PFAM:PF06810.10	minor-structural-protein-	MNLEELLKSLGLDDEAIGKVVEATKPDQAQAEEIERLRKHNETLLGEKKAESEKRRAEQAEKERLAEETARKKGDFETLEKQYQAKIQELNEQIAKRDKERDENLVKSHAQKLSSQLSDNPANQEILQILIEKRLFAKDGQLSVLDDSGAVSIMTLDDLAKQMQNCGKYDSLIIGTKSCGTGSNGQSAKRAGDYSEQERLALAHSNPALFNQLFLE*	hallmark_hmm	common_virus	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0008	shell	direct	high	650	0.998	GCA_009379155.1_00618
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	175975	176991	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	5281	6297	GCA_009379155_1_9_168	GCA_009379155_1_9_168	+	333689	.	PDB:6R3A_A	Major-Capsid-Protein	MAKLREIFNKNVTLSYQVKDNLQRSKFWQSGAFVSDARLRPLLNSGSLTFDVPFIHPIDGNLEANYSNTIMTDIAMPRSIEGSKSKGRLALLNEGFIESRLESYLLGQSPLKLMAQMIDDYWLTQAENRAIATLFGLLNYDQSNGKKLSTDISKATADDSSGFDVHAFIDAEGTMDEMYQGKGLMVVHPLIATKMRKQRLLERVTTADDLKPIETYNGRRLIQSKRATVIGTGKNAKYVSYLLGAGAFAADMVAGHDDLELERTANTGNGSGHTTLWTRRNMLIHPQGFSFIGEPSTLTGGTKNEALSASWTDLTTAANWRLDADADATPIRFLITNL*	hallmark_hmm	common_virus	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0009	shell	direct	high	1016	0.999	GCA_009379155.1_00619
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	177002	177205	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	6308	6511	GCA_009379155_1_9_169	GCA_009379155_1_9_169	+	333689	.	.	hypothetical protein	MSLPKDKVKPAFNFTYPSERAYFDESKSTLANAQVTDPAKSGADYGIKDPQVTEALTGTKSETAKVE*	.	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0010	shell	direct	high	203	0.995	GCA_009379155.1_00620
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	177266	177625	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	6572	6931	GCA_009379155_1_9_170	GCA_009379155_1_9_170	+	333689	.	CDD:cd08053	Head-Tail-Connector-Protein	MITLDDLTDIDKADEQTVVIVNAWLNKHKLIPFKTIPEPIKQAGRYIAKAWLDGDLFATRTEGQVISKSSKAGDVSVSKTYADGQMGQAMSQNEQIALALIEPYLQQPLGMFGLPLVRV*	hallmark_hmm	common_virus	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0011	shell	direct	high	359	0.997	GCA_009379155.1_00621
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	177627	177983	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	6933	7289	GCA_009379155_1_9_171	GCA_009379155_1_9_171	+	333689	.	PFAM:PF12206.7	head-closure-Hc1	MGLKAEISTEITQAFDTDLKDAVKDFTGRRVILSDDDWAVNDTQVLSTINYSGRGVFTGFYAHEIDNKTIMQSDVKLICLQDELTEIPQIDDEINEMKIISISHDPAEVSFTIQLRGF*	phrogs_hmm	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0012	persistent	direct	high	356	0.997	GCA_009379155.1_00622
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	177983	178330	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	7289	7636	GCA_009379155_1_9_172	GCA_009379155_1_9_172	+	333689	.	PFAM:PF04883.11	tail-component	MGIKWNKKLSIDPIADEIDKTYRKFAIDCYNNVIALSPVRKGRYKNAHHISIGSPSYAETGGGVELILGIPKHTYPIIYIQNNLPYALRLEHGWSQQAPTGVYGNAFNSAIANLG*	hallmark_hmm	common_virus	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0013	persistent	direct	high	347	0.997	GCA_009379155.1_00623
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	178327	178527	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	7633	7833	GCA_009379155_1_9_173	GCA_009379155_1_9_173	-	333689	.	PFAM:PF16777.4	transcriptional-regulator	MPKITSTPKTQTQIQKESNARRGVKNKAFTLKLDDIELIKSLSKRLNIPQNQLIMDAVRAYQRQLD*	phrogs_hmm	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0014	shell	direct	high	200	0.995	GCA_009379155.1_00624
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	178907	179293	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	8213	8599	GCA_009379155_1_9_174	GCA_009379155_1_9_174	+	333689	.	PDB:2L25_A	tail-completion-protein	MNSFHIEQTLLTHIKAWEYFDDVPLAKENRNFKPPDGIWGRVTILGGVNQVRSISNTPNILQQGTLVIQLFCPQDLGTVAIKQKADSLAQYLKAKQLGRLELLAPSIINVPSNDGIYQINVSVPYRYY*	hallmark_hmm	common_virus	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0015	shell	direct	high	386	0.997	GCA_009379155.1_00625
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	179302	179820	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	8608	9126	GCA_009379155_1_9_175	GCA_009379155_1_9_175	+	333689	.	pfam11195	Protein of unknown function (DUF2829). This is a uncharacterized family of proteins found in bacteria and bacteriphages.	MKLITASVLTALLTSFVATRTVQATPLNRQEYNDLRGWQVPDNENPNDDGYLVVNAGVSERNVDGFDGYVSWLPKLAFEEQYKNDNLTFGQAVELLKGGKKVARKGWNGKGMYLLLATDIDFKTKANLSDMQNENGELTVPSITMKTADNKFAVGWLASQTDMLAEDWVVVQ*	mmseqs_cdd	common_virus	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0016	shell	direct	high	518	0.998	GCA_009379155.1_00626
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	179855	180763	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	9161	10069	GCA_009379155_1_9_176	GCA_009379155_1_9_176	+	333689	.	PDB:5NGJ_B	Tail-tube-protein	MSSGAFVKTAYAKQTGETLPKTGWKTLPNISNGLTVATELTNSEMLSGSRMAKAGMVTSASVQGDIETELMFGAYDELLAAAFWSEWSSGASPNTLSVGATKHQFAIAKDFSDINVNHVFTGCVVSSFGLTIDTSSLIKLKFGMTGLGYQESKTTSFAKTPTKTPDTAKASGLSIGEIKVNGTKLDVCVESFSFELDNQTEVQKCLGDNIYGGNILAMLTNITGSMTIAYSQKAHEMISNQMTGATLSLELPIKFGNSKYVIKIPKFQVSGEIPSPSGTDLVTVDLSYTVVDESPVIEKHTA*	hallmark_hmm	common_virus	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0017	shell	direct	high	908	0.999	GCA_009379155.1_00627
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	180847	180993	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	10153	10299	GCA_009379155_1_9_177	GCA_009379155_1_9_177	+	333689	.	.	hypothetical protein	MEYITIIVDFMKYLIEKHGLFVIWLMVASLITLYKLDMILTAVHLFFN*	.	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0018	shell	direct	high	146	0.993	GCA_009379155.1_00628
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	181045	181506	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	10351	10812	GCA_009379155_1_9_178	GCA_009379155_1_9_178	+	333689	.	PFAM:PF08809.10	Tail-assembly-chaperone	MAFDLTLLKKDAKMSAKRDIEFDGLELTLEIQASEAFKRAAAEVQKIANTPKKVTKDSLKRGNQDEIGEYEAMLFILGEYCISQWNVTADGEPLAVNGDNFLILLDQGFEKDKLTQFITLLFETYASLSQEFEDNKAKLVKKSTTATNGKKSG*	phrogs_hmm	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0019	shell	direct	high	461	0.998	GCA_009379155.1_00629
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	181872	182420	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	11178	11726	GCA_009379155_1_9_179	GCA_009379155_1_9_179	+	333689	.	.	hypothetical protein	MKKLLIAGILSLSSLTVSAAQNDVQVDINKFINASNVVENPFHADSALEYRFVNADNLNVRDYPVTGNVVGQLSRGEQVGVYAVSDSWVQISSGYTDSKWVSAAYLCEGAGCFEKSTKNTKNQRTANQSNSGSQPKNTTTKKSSAPKRTYSDGLCPCSGSYNCTGPRGGQYCITSGGNKRYR*	.	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0020	shell	direct	high	548	0.998	GCA_009379155.1_00630
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	182432	183358	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	11738	12664	GCA_009379155_1_9_180	GCA_009379155_1_9_180	+	333689	.	PFAM:PF05766.11	HNH-endonuclease	MSDFFWLMAFIGFCFVILIVGIGIVVYIFNSISTLIKHKPKSYSEYKELRRKDREIAQENIKKLAGYKERVMAICDKNFVSEDEIAELTNYINTNNLSSKQIDIYAHTAFKKHYAAIVSDNLLTDEEMESLTRVAKFLKPDKQLVKKELEELSRSVSLKKIQSGILPEAYTSAIILRRGEIAHFVIPAQLLEERVISRGYKGGSQGVSIRIAKGITYRVGQNRGKLVSEKGTIPVDSGDFVITNRRLIFTGTKKSFSYDYKKLLAWNVYSDGILLNIDNASSRMLSFSNNIDSDAIHLALAYLVDQNT*	phrogs_hmm	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0021	shell	direct	high	926	0.999	GCA_009379155.1_00631
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	183399	184037	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	12705	13343	GCA_009379155_1_9_181	GCA_009379155_1_9_181	+	333689	.	.	hypothetical protein	MKKLLKWFGIIFAVILGIGVIAVALETPEQKAEREAQAAEEKAQREAEYVAQIDDKEEVQPVNLGMTPQELGSGIDNIIKEISGVDPQLRSVSTNDNIYSVNLGEDIIWYGDLDKTGNIITSMYNVKISDNVEDRMMALLAFAIAKARTLSPDLPKEQVANSVAEVMSRAMKKFNQSLKPTTETQVIGDYKYIVNIYPDSKSMRFSVVHKDH*	.	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0022	shell	direct	high	638	0.998	GCA_009379155.1_00632
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	184331	185173	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	13637	14479	GCA_009379155_1_9_182	GCA_009379155_1_9_182	+	333689	.	PFAM:PF10547.8	P22_AR-protein	MSNISIFNFESTKQVRTAIRNGGDIWFCLPDVANVLEISRSSDLLQVAKPAFVKNETSSKRGALDPAGVHKMYISYESGKKQVTFINEPNLYRVIFRSNKAEAVKFQNWVFDEVLPTIRKTGQYTIAFATKDERKPLVQAVNMLVGETGAIYSNVWKMIHQRFDVDCVDELTNEQVYQAVEYVHGLILQHGKKPVDDVLLYKVLVDSAVYLRDYAQLIKQMRDIRFFDENMGKNMYNFVADNINDIVRLTHDMKLTNKNGRPMFEKNRINYYGGATLIYR*	common_virus_hmm	common_virus	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0023	shell	direct	high	842	0.999	GCA_009379155.1_00634
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	185331	185513	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	14637	14819	GCA_009379155_1_9_183	GCA_009379155_1_9_183	+	333689	.	.	hypothetical protein	MQDNAKKSDATHHSAQLLRDMFSCLNQAMSRETEKFHQEQKKVKEEINRGARITNHRISL*	.	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0024	shell	direct	high	182	0.995	GCA_009379155.1_00635
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	185476	186312	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	14782	15618	GCA_009379155_1_9_184	GCA_009379155_1_9_184	+	333689	.	.	hypothetical protein	MAQESPTTESLFDFLYLDSIKIRSFYAQLTGFGSLASIKANNALNSSLASEGAFGVNAMAKIDAKVNYATGENQSSEKTYDATPTLPREMIDKLDELGFISRELGENSAGNLVLLNGVLSITDIETLQNLLEPTMYFVTEEECKQLYGDRKRQAVKKKLEENKPVVQLIKAIPYALEARLKVGEDMVWMTLNRGEMVGNPHDINLKHGKVLFGEYYVLGVLDAIPNDDMNIDMTTGSFGDVILELSQSLKETMGRNTSSYGITPIAIFRVIRTNQQAK*	.	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0025	shell	direct	high	836	0.999	GCA_009379155.1_00636
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	186345	190331	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	15651	19637	GCA_009379155_1_9_185	GCA_009379155_1_9_185	+	333689	.	PFAM:PF10145.8	minor-tail-protein	MGGFLLGEFMSNTYRLDIQVNADSANTALGNLKEHFDKIEQSSGKASVGIDGFSDKADKASKSSKKAGDEAKKASNAQKGLAASFKEATAVAAVGFAAISGTVALSIGKANEFESALAGISKVVDFKSPDGLKDMRAELEALSTQIPLTFTELAQITAAGGQLGVAEENLIAFTRLTADMATAFDISAESAGDSMAKLANIFSKPIEEMGEFGDMINTISNNMPAKASEIVESLTRIGGTAKAFGLAEKEAVALTSAMISLGKAPEVASTAINSMLTTLSTLDVADKDVAASLKAMGLNAQEFGKTIREDGYKAIMQLLEGIEQLPKDQKIGIVTDLFGKNFGDDIVQLAGAPDVLEKINELLAEQQGYIGSMAQEAKNVSSTSEARNQMFLNSLENASAALGEVFKPALDSVRDAVIPVLNAFADFTKENPTFVAAIVGIAGAFTGVLTILGGVLAVLPILASGWAILTAGATVAVAPILGVVAAIAAVVAVGALLYDNWDLIKAKGQEIWAAVSDYASQAWESIQQAWQGVGEWFGELWDKVKQTFFNWLSQMPKPVQDMVANIGEIFSTIVDVAGAVWDGIANIAKSVWHAITKFVSYAIDKIKPVIKSVLEFFKNAWDGLVSIAKTVWQAVVSVVSHVFDKISGIISTQFEAMKAIFMAGVTIFASIFNAGFEMVKTIFSTAFKVIKAVLTGDMQGVKDAIKDGFQKAVDILKKLVGNIVDALKKLGKDLLQVGRDAMQGFINGISEKIGAAVSKAKQMASSVKNAITGFFDIHSPSRVMKQVGGWISEGLAIGIAYKAPIAAKEAKNLAKSVKNALESDLQKTAEEIFLTKQHIAGNPYAQLTKDIAFGKYGKQDTSRLQKLAQEQILQSNILTLTQQLHEAQQNLANVGLTSIEIMQRQYDETDKSVRASLDLFEQVKKTSQELIDATNRHEATQEFESTLKDIKKQMAIMGSQDPLAEFLYDLQNAEKYAYYTTEQLATLKDEMIKLQNAKDAKQASDGIEESLKDINKQLALLGSNHPLDDFFYDLEQTDKYAHATTDEINELTDAIFKLQDAKDKLNAKQAFDTLMKDTALANETPAQRLQREYDEKMAVIDRYEQMHSDKLGDATSLRQQITERYEQAEKDAKVKNYQEHLTAFAGFLKNTAGEQSKAYRVMFAASKAYALADVGVKMGKAVADAWADPSAVTIWQKLANVAKVSLEQGHVLSMINAISPKGFATGGYTGNMGINQVAGVVHGQEYVLNAKATKRIGVGNLERLNRGDGIGGHVNHINVHVTVNSDGSNVQADTQMGKTMGEAMAKIARQVVIQESKQNGHLDRLYRR*	hallmark_hmm	common_virus	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0026	shell	direct	high	3986	1.0	GCA_009379155.1_00637
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	190434	190754	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	19740	20060	GCA_009379155_1_9_186	GCA_009379155_1_9_186	+	333689	.	PFAM:PF05939.12	minor-tail-protein	MKTFTWDISADSSETTALNTTITAFGDDYEQAVSFGINNSRKSWQCSKTDTKAVIDEIYRFLIDTKGVEPFNFKPLTDEPSIKVRLDGEISRQKTGGAMFGKLGLL*	hallmark_hmm	common_virus	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0027	shell	direct	high	320	0.997	GCA_009379155.1_00638
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	190873	191256	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	20179	20562	GCA_009379155_1_9_187	GCA_009379155_1_9_187	+	333689	.	.	hypothetical protein	MSETTLTELSRTEAQVLQSFIAQVDFWKNQHGDKAATIEVIYYPEDDGFEVANGEPNNGVLKRNRTTAFRADLLAWASNQLRQLQGWDNSQTVTEFSLSYKNDRYGVRAALASETTDKADDGAEQTQ*	.	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0028	persistent	direct	high	383	0.997	GCA_009379155.1_00639
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	191399	192067	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	20705	21373	GCA_009379155_1_9_188	GCA_009379155_1_9_188	+	333689	.	PFAM:PF05100.11	minor-tail-protein-	MSFNTDIQQTTVQGFITLYELDARKLGGEIYRFHGHNDGVIRWQGQDFHPIAIKADGLEMRSDGRASTPKLSIGDKINGIQGAVSALCQLYDDFARAKLTVTHTLQAYLDSHDAQNYRQQEWYIEQKVSENPSLGIVEFELSNPVDFEGQKIPVRQITTYCNEAVCGRYRGEVCGYTGTARFTHDGKPTDDPTLDRCSGLLAHCKLRDNEGSFCGFPAAGLV*	hallmark_hmm	common_virus	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0029	shell	direct	high	668	0.999	GCA_009379155.1_00640
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	192064	192267	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	21370	21573	GCA_009379155_1_9_189	GCA_009379155_1_9_189	-	333689	.	.	hypothetical protein	MADKASPQARKKATANYFDKSLARIGLVISHTEPHVLDALNQIMAHKDCSKAMAIKIALVEYAKTLD*	.	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0030	shell	direct	high	203	0.995	GCA_009379155.1_00641
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	192414	192536	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	21720	21842	GCA_009379155_1_9_190	GCA_009379155_1_9_190	+	333689	.	.	hypothetical protein	MIVILSIAFPPYVTARLVLAQSTPLVLMKCIVLQYTNKVN*	.	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0031	shell	direct	high	122	0.992	GCA_009379155.1_00642
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	192650	193441	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	21956	22747	GCA_009379155_1_9_191	GCA_009379155_1_9_191	+	333689	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MRLTKTIKEAIHAHAKICYPAECCGLIIDGQFYPCDNITPNPYEHFEIDPKDFARAESMGQIQAIVHSHPDGNAEPSEIDRVQMGVHGLDWVICAFGYHAGGKEYFDVKCHKPKAYQAPLLGREYHHGVQDCYSLVRDYYNRELDIHLPDFHRRDGWWGDENHEPLYEKNFAKAGFIKMQDETDLQKHDVILCRVGRTHHVNHALIYVGDGKLKSETTPDCVGNALILHHPHGSLSVREIYGKGWADRTAMVVRHQALSQTNL*	mmseqs_cdd	common_virus	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0032	shell	direct	high	791	0.999	GCA_009379155.1_00643
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	193421	193834	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	22727	23140	GCA_009379155_1_9_192	GCA_009379155_1_9_192	-	333689	.	COG1598	Predicted nuclease of the RNAse H fold, HicB family [Defense mechanisms]. 	MHYPVTLTPDTDGFCVTFRDIPEAISQGDTTDEALDMAQDALMVAMEFYFEDNRAVPMPSQAQDGEHLVSLPPSVWVKVLLLNEMIAQNVSQAELAKRMGIVPQSLTRLVDLSHTTKIDTLANAFAKLGKQLQVGLT*	mmseqs_cdd	nonviral_gene	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0033	shell	direct	high	413	0.998	GCA_009379155.1_00644
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	193850	194056	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	23156	23362	GCA_009379155_1_9_193	GCA_009379155_1_9_193	+	333689	.	.	hypothetical protein	MVKAITPDEIRAAGEQFKSHPENNAPATADKLIANKSGFVLSERSLKNLQMIIAPLPKQWHRQAVSWA*	.	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0034	.	unmatched_CDS	none	0	0	.
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	194026	194145	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	23332	23451	GCA_009379155_1_9_194	GCA_009379155_1_9_194	+	333689	.	PDB:2MXZ_A	L-alanyl-D-glutamate-peptidase-endolysin	MAQASGKLGVNVRWGGAWMVITGKAGTPQEWVKDYRAGG*	common_virus_hmm	common_virus	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0035	.	unmatched_CDS	none	0	0	.
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	194470	195570	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	23776	24876	GCA_009379155_1_9_195	GCA_009379155_1_9_195	-	333689	.	COG0842	ABC-type multidrug transport system, permease component [Defense mechanisms]. 	MRRFIKQYLTIWLDVIKDRSIFLTMVLSVVFYGFFYPFAYQAQRPADLPIVIVDEEQSPLTQAIIHTTSHTPNIHVLAVVSDFRQAQMLVQSAKADGILLLPDNLSQSIHHGQTGGVGLYLSSAYFLRTQNIGAGLASALHATIAQELGQVTQTRHKPMPELIHQSALFNPLSGYGSYIFPAVAPIIVYQTIVLGLAMLVAGYRQRLWRASACDFLAIYAVALTIGCLSCFYLFGFVFWWHDYPRGGNFWGMMLGVPIFVSCAIGVALLIASWVADGAKVGVLLIFSSVPLFMLTGLAYPLMAMPKFLQPLAHALPTTQGVQMFIQLNQMGVPIQDVWQKMAYLASVAVLCLGVAFWRLRLVNKSV*	mmseqs_cdd	nonviral_gene	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0036	persistent	direct	high	1100	0.999	GCA_009379155.1_00645
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	195570	196748	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	24876	26054	GCA_009379155_1_9_196	GCA_009379155_1_9_196	-	333689	.	PF12698.7	ABC-2 family transporter protein	MIVRFIRAFCQAFLRELNRLSCNRFDLAMVMIAPFVIIVLFGAMFYHGKAHHLPVALVDEDNSELSHLIYQHIHHNETVEAVLILDDIQDAHHAINRLDVGGYIHIPKDAQNRLVRGENTGIHIAYNQSFFSIGSAISSALSKSTKGGIAKFIQTKHLTGVLPHLSGNMPHVKISVLFNPNLSYEFFLEPFLVAAVLHLLLCCLVAHAIGQEFHEHSVHEWLYHSPFGALFGKISVYVLIISLWHGLWQAWLIGVRGWFVAGSLFVLIIGQLLFYLAYALFGAMVVLKTQNINKSYGILAVYGGSSMSFAGVTLPLNNASGFTQFWSQIIPFTPFARLQVEQWVIGSPFIITLAHLNSLLIFVLIFAIGSLLLLRRIKKTLIAIPNTPKDDS*	hhsuite_tools	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0037	persistent	direct	high	1178	0.999	GCA_009379155.1_00646
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	196776	197939	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	26082	27245	GCA_009379155_1_9_197	GCA_009379155_1_9_197	-	333689	.	COG1566	Multidrug resistance efflux pump [Defense mechanisms]. 	MTDKTDDVKPDTDGNCPKKQKPHTQDKSKPRPLVLFLLLALIGSVLLVIIFGLIQSYGTPQNLPTANAIGSTNEPPKGVIAHLRQKITGPATFSIQGRVESETVNISTKLPSRVAAIYVKEGQAVRAGEPLVQLISPEIDAKKQQAAAMLQSALAFQSSTDRGTRQENVDTLYANWQSAKAQATLAEESYRRGEYLYQEGVISRQRRDEMRAAKQSSAQIAQAAQQQYLKAERGRTDELKSSADAQVQIARAAVAEADALDAETMLYAPIDGTVSKIYIQSSELVMPAVPVMSLLDNHPTITISVQENQYSHVHALSKLTGFIPALNKTADFKIVHTDDEGEFATIKNTRQTGGYDIHSFKTKLEPITPIEGLKVGMSVIFDITVLP*	mmseqs_cdd	nonviral_gene	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0038	persistent	direct	high	1163	0.999	GCA_009379155.1_00647
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	197986	199482	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	27292	28788	GCA_009379155_1_9_198	GCA_009379155_1_9_198	-	333689	.	3PIK_A	Cation efflux system protein cusC	MPIKCQLVAIDNIIKPCYDKILNFVYFSTMKTPYFLLLGLLLAQQADADYSLLDAQKQLMSSSPAIQASHALYQADFLQAESLQKLHYPRISLNAHAFVLQQNSSIPLDHIKEQTAQHINTHFDHRFGNAPDGLLDALHDSTQTALDRLPDHQDVKLRHDGITPNITATMPIYTGGLISSSKNIANLQAQRGKFGLQERISLAKLNLIRHYFNVQLQKQLTDTQQNTLSAMQLHVDNAYKLEQQGFISRGQRMQFEVARNQVQRLYQSTQNQHQNSIYELAVLLGLPHIEPLSTPLFINTQHRPNWQALLKDSQNTPLNQKLKTDILLVDENIALRQSTKKPKIAAVARYTLDNKPDWFAGVAVQYNLLSGIDRDKQIEAAHLQKQAAKSGHEQVNEHITTTMHTAYGEMVLAQKTHALLQQNHQAAKENLRIQTLSFQEGFGTVSGVVDAQSALSQIDSETALNAYRYLLALATLLHYTGAIDDFDDYLSLDDAHKL*	hhsuite_tools	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0039	persistent	direct	high	1496	0.999	GCA_009379155.1_00648
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	199744	203916	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	29050	33222	GCA_009379155_1_9_199	GCA_009379155_1_9_199	-	333689	.	PDB:5XDR_A	Replicative-polyprotein	MHSTDNLPVLAKDRHYLNKLKQKMNSTTGDLKTKCKIRYDAIYERSAEQVANRMDSIPKNLSEKLNHDLPVTAEADTLIQAIRDHQVVIIAGETGSGKTTQLPKLAMMAGRGITGQIGHTQPRRLAARSVAMRIAEELGEPLGQTVSFKIRFTEEGGKHSIVKLMTDGILLAELGSDKFLANYDTIIIDEAHERSLNIDFIMGYLKRLLPKRPDLKVIITSATLDTQRFSDYFAANGKPAPVYIVEGRSYPVEVRYHPLTDTIVSSQDDDAFDDIEDNLPRALTAAINECFEDARTKGHPDQADILIFAATEAEIRELQEVLMLYAPAHTEILPLFARQSYGEQQKIFAPSGKGRRIIIATNVAETALTVPNIRYVIDLGFARISRYNYRSRIQRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFNSRPEFTEPEILRTNLASVILQMERLQLGDVNAFDFITPPDLRLVNDGRKLLIELGALDDKSFTKTRTKKGRTQLSSLTKIGQQMAKMPIDPRLARMLVAGDTFDCLADILIIVSALAVQDVRERPINKHAQADQKHALFRKEDSDFLFYLELFAALFDQHSTNDNQALSSNARRNFAKKHYLSYARIREWQKTHRQLSEMMAEMGFEINKQKNHQNDVKIDTKKGVRLSLKSGTSHQKSIKQALVGAKALKNDIDNKTSIHYANIHRALLSALLSFVAHKTDTVGEYLMARSQKARIFPASTLHKKGAQWVMAFEVVETSQVYMRTLAKIEPEWIIKAAPNLLKYHYFEPHWSKKAGRVRAYAQISLFGLIVIAKELVNFEQIDLVQAREIFIRDALVANQYGMQMKFLADNANKIKDIERIEDKLRRRDLLVDEESLYQFYDAKIPNHIASRKSFEEFYHDAENKTPNFLHFSDEDVLNEAVDDSREFPESWHLGGVRLPLSYVFDPAADNDGVTVHVPIKALAQVDPVALLWGISGWRYELVLQLLKTLPKEIRRQIVPIPDTCQKIFHQLDASSKMGLLDQLVAALKTLGVQAHAQDFAPDKVEDYLRPLICVVDDKNRVIEKSRDLPKLQARHRKTSVQSIAIEQGVHHHFPNHFNFVKNKHTSGIVMQEFSALKADAAQSAVFIATFTEMNAALAEHKKGVLTLIKGHLGAKQKQLTGQIDKAFKLAFAPLGDLEKLKNIVVHATLEACLYDYGPDFDHKPVSQHGDHARAAIAGLITQNNQWLISHLPLDEREFDDCQDLILKNFLLVGQEILRNLKEIYTAWQTARGKLLMLDQEIFGENIEDIEDQLDDLQLANFVYQTDYRHWRQYPRYLQALNIRLDRLQHNLEADLDAVYLLDTHMERLARCVKNPKFAEYRWLVEEYRINLFAQPMKTVQPVSAKRLETLWANLTTQ*	common_virus_hmm	common_virus	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0040	persistent	direct	high	4172	1.0	GCA_009379155.1_00649
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	204191	204880	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	33497	34186	GCA_009379155_1_9_200	GCA_009379155_1_9_200	+	333689	.	TIGR02796	TolQ protein. TolQ is one of the essential components of the Tol-Pal system. Together with TolR, it harnesses protonmotive force to energize TolA, which spans the periplasm to reach the complex of TolB and Pal at the outer member. The tol-pal system proves to be important for maintaining outer membrane integrity. Gene pairs similar to the TolQ and TolR gene pair often number several per genome, but this model describes specificially TolQ per se, as found in tol-pal operons. A close homolog, excluded from this model, is ExbB of the ExbB/ExbD/TonB protein complex, which powers transport of siderophores and vitamin B12 across the bacterial outer membrane. The Tol-Pal system is exploited by colicin and filamentous phage DNA to enter the cell. It is also implicated in pathogenesis in several bacterial species [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MNESISLISLVIEASVVVKLVMAILLLLSTISWVLIFHLGTKIGGIAKFDKRFERWFWTDDIDHQLSVVQAESERAGLELIFYTGFYDQNHQDQDSSLSDDKKVQIVERRLRMALGSEQVHLEKGLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQAESVGLATVAPSIAEALIATALGLFAAIPATMAYNHFATKSNTLYENRSLFCEGLISALVTNLAKKNTASTL*	mmseqs_cdd	nonviral_gene	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0041	persistent	direct	high	689	0.999	GCA_009379155.1_00650
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	204906	205340	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	34212	34646	GCA_009379155_1_9_201	GCA_009379155_1_9_201	+	333689	.	TIGR02801	TolR protein. The model describes the inner membrane protein TolR, part of the TolR/TolQ complex that transduces energy from the proton-motive force, through TolA, to an outer membrane complex made up of TolB and Pal (peptidoglycan-associated lipoprotein). The complex is required to maintain outer membrane integrity, and defects may cause a defect in the import of some organic compounds in addition to the resulting morphologic. While several gene pairs homologous to talR and tolQ may be found in a single genome, but the scope of this model is set to favor finding only bone fide TolR, supported by operon structure as well as by score. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MVTSNRFARRQRPLNSDMNVVPYIDVMLVLLVIFIVTAPMLATGIEVSLPKEQTKPITQADKLPVIVSIQADGNLYVSHKNAIDVPITPDKLDTLLRQMHQDNTDLQVMVNADADNAYSRIMQIMALIQNVGITQVSLLSESVQ*	mmseqs_cdd	nonviral_gene	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0042	persistent	direct	high	434	0.998	GCA_009379155.1_00651
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	205371	206171	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	34677	35477	GCA_009379155_1_9_202	GCA_009379155_1_9_202	+	333689	.	4G7X_B	Putative uncharacterized protein, TolA protein	MRLSDNHPTVNFDKSALILPILASVLLHTVIIIAVAAPLITPPTKPNTTIQTALVGQEAFNRVKTALSNHHANQNKPTATNTSSTITANDNDNAFMQAQNQHRYHPQVSTSATTTQAYHPPPNSAPFESNSPNIQNQPTNAHAKLAEYSNHVSDLEQSNHTESTPSRAQINAAITSVKHRIEAIWQHYPKQPNQTITFQVNMNQQGDVTSIQFGGGHPDLRESVEAAVYAAAPFYELGGMRDSIRLQFTTEQLIMDNNQTTNEPNH*	hhsuite_tools	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0043	persistent	direct	high	800	0.999	GCA_009379155.1_00652
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	206188	207450	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	35494	36756	GCA_009379155_1_9_203	GCA_009379155_1_9_203	+	333689	.	TIGR02800	tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MKSPITKVCLALTISFSAALTHTYADDELIVISEQVAPSQYPVAVMPFSEAHQMSHYLSLAGLGTTHQNLPQHTQTNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEIIDTANGLVSVKHTQISDNHPASIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNKISSLKLIDPSGQLIRTLDTVNGSIITPTFSPDGLSIAYSVQTKNNLPIIYIVSVSGGTPKLVTPFWGHNLAPSFSPDGGSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPNYLADASGFIYTADKGTRRQSLYRYDFGTTHSTQIASYATNPRLSPDGSKLVYLSGGQIIIANTKGRIQQSFRVLGTDVSASFSPSGTRIIYTSNQGNKNQLMIRSLSSNAIRTIPTSGTVRDPIWSK*	mmseqs_cdd	nonviral_gene	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0044	persistent	direct	high	1262	0.999	GCA_009379155.1_00653
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	207450	207719	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	36756	37025	GCA_009379155_1_9_204	GCA_009379155_1_9_204	+	333689	.	.	hypothetical protein	MPMSIPTKATVGYTQRRLFMVSMTVGLISLSGCQHIQVTKSPIPIIIHSHTKSPSQPKPTPTDAVPTKNRPISPPTQKSNTIFILEDWF*	.	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0045	persistent	ambiguous	low	3	0.011	GCA_009379155.1_00654
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	207716	211270	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	37022	40576	GCA_009379155_1_9_205	GCA_009379155_1_9_205	-	333689	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MIDTFKPKLDLPTKANFKTILPLLGGADLSFWLALAAKSEERLIVMIANHQNELNQLDTELSFFGIDAHVFPDWEILAYDQLSVHQDIISERIALLTRMPTTGVLLVSTQTLMQRIAPPSWLIGQHFDLAVGDKFDIHEQRLRLTKAGYVQTENVFEPGEFAVRGSIVDIFAVGQSLPFRLDLFDDNIETIKFFDPDSQRTLSDNDLAQLKKDAQAGMNTHHAQKLPSSAKITEFRLLPAREFPLEAGKEMFRQNFASLFPNASARKIEFYNDVMAAIAPQGIEFYAPLFFELDAWMKTGNLFSYLPDDTLVVSHDNLSACHDEYYQQIQARHHSRAHDKSLPIMPPDYLFLANNEFHQVLKAYPRVVINTNHDTAKIGAMESLPPPILPINHQAAKPLSELLSFIKSGQVPILLVAESAGRREIILELLKDKVAVKVVDNYQEFINNLDDFNTDCIALSVAPIERGLWLRDETGGLCIISETQIFGRQVLQTRRRRQSSVSQAFLIKSVTELTEGALVVHLEHGIGRYQGLVVLDVGEGEQEFIHLKYADDASIYVPITNLALIGRYSGSDLQTVSLSKIGSGKWEKAKLKALEQIHDVAAELLNVQARRNAKSGISFDIDMSQYELFASQFAFEETIDQAEAIHAVMHDMKQNKPMDRLICGDVGFGKTEVAMRAAFIAVQAGYQVAVLVPTTLLAGQHEDSFLNRFADWPIKIESLSRFGNKKHQDAILAGLADGTVDIVIGTHKLIQDDVKFKQLGLMIIDEEHRFGVRHKERIKALQTNIDSLSMTATPIPRTLNMALSGMQDISIIATPPARRLAIKTFLLPKSDETIKEAILREILRGGQVYYLHNDVASIEAAADTLRELVGEARVAVAHGQMNERELSVVMNDFYHKKFNVLVASTIIETGIDVPNANTIIIHRADKFGIAQLHQLRGRVGRSHHQAYCYLMVPSLKGLSSDAKKRLNAITRANTLGAGFMLASEDLEIRGAGEILGKEQSGNMQTIGFGLYMDMLERATNAIKQGKTPSLATPLDLVSDIDIHASALIPDEYLGDVHERLVFYKRISSLDDVNQLIDIRTEMIDRFGTLPTQTQNLFAVHRIRIRAKALGITKIDATQTTISIEFRADTPIDGLAIIKLIQSNDGYRMNGATAIRYTSQELMDTQARIDKVNELLLYFESTKTA*	common_virus_hmm	common_virus	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0046	persistent	direct	high	3554	1.0	GCA_009379155.1_00654
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	211275	211937	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	40581	41243	GCA_009379155_1_9_206	GCA_009379155_1_9_206	-	333689	.	PRK00043	thiamine phosphate synthase. 	MTLQSIDKVPKLYLLTNDDELTTLLDKLERVFDTGAVSLLQVRRKSTLKLYDLATVYREAEMIVSLANDYDIKVVMNDSLELASHFGTGLHLGQRDGSVRVAREILGDHVVIGRTCHTDLALFKEAKREGATYGAMGTAFASITKPRAKIISKDILKKACELDFPLCVIGGITLENIHQLRDKLNGAAIDYIAVTADIMGHSVDTIADKCLAWQQKLNTW*	mmseqs_cdd	nonviral_gene	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0047	persistent	direct	high	662	0.998	GCA_009379155.1_00655
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	212091	212528	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	41397	41834	GCA_009379155_1_9_207	GCA_009379155_1_9_207	-	333689	.	6AF2_A	HIT domain-containing protein	MFQLHPTLAKDTFLVGDFPLSTVRLMNDCQFPWLILVPRVSGIKEIYELSAADQVQFLRESSWVSSQMAKIFGADKMNVAALGNQVSQLHFHHIVRYQNDAAWPNPVWGHEAMPYTQEVLSHMQQTLMMALRGHHQMPFDWKMDV*	hhsuite_tools	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0048	persistent	direct	high	437	0.998	GCA_009379155.1_00656
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	213104	213301	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	42410	42607	GCA_009379155_1_9_208	GCA_009379155_1_9_208	+	333689	.	PFAM:PF16777.4	transcriptional-regulator	MPKIVANPKTRAQIQKDSDARRGVKPIGFKVPIEFAELLDELAKQSGKTKNIIIMEAVELWAKQL*	phrogs_hmm	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0049	persistent	direct	high	197	0.995	GCA_009379155.1_00657
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	213626	213916	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	42932	43222	GCA_009379155_1_9_209	GCA_009379155_1_9_209	+	333689	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MALECLDVHFSGLVADGEEIPLPTNFDAHTQNSQFDGMMWAWVAVDLSKYDVKSHKINITLPNHLIAKIDEKVAAHKSLYKSRSNYLAQLAMADLA*	mmseqs_cdd	nonviral_gene	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0050	shell	direct	high	290	0.997	GCA_009379155.1_00659
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	214319	214534	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	43625	43840	GCA_009379155_1_9_210	GCA_009379155_1_9_210	+	333689	.	.	hypothetical protein	MTDSTTSPARQKATNTYRQKALANIALVISHTEPHVLDALNQIMAHKDCSKAMAIKVALVEYANTLSQTSH*	.	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0051	shell	direct	high	215	0.995	GCA_009379155.1_00660
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	214650	215195	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	43956	44501	GCA_009379155_1_9_211	GCA_009379155_1_9_211	-	333689	.	COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ribosomal structure and biogenesis]. 	MSQFSDALIHIVLFSPKIPNNTGSIIRLCANTGAQLHLVKPLGFELDDTRLKRAGLDYHEYATLSVHDNWQETKSALKSLGVERIVAMTTKFSRPFYEYQFKLDNDQHKVALVFGSETDGLPEEVRADIGANHWLRLPMLPDSRSLNLANSVGICLYEVWRQLGFVGDIGQSVGYHKPTSR*	mmseqs_cdd	nonviral_gene	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0052	persistent	direct	high	545	0.998	GCA_009379155.1_00661
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	215443	215583	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	44749	44889	GCA_009379155_1_9_212	GCA_009379155_1_9_212	+	333689	.	COG5510	Predicted small secreted protein  [Function unknown]. 	MKKVLVASIAAVVVLTGCNAIKGFGKDVSKAGEAVSDTAQKVEKKI*	mmseqs_cdd	nonviral_gene	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0053	persistent	direct	high	140	0.993	GCA_009379155.1_00662
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	215665	216840	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	44971	46146	GCA_009379155_1_9_213	GCA_009379155_1_9_213	-	333689	.	COG0635	Coproporphyrinogen III oxidase or related Fe-S oxidoreductase [Coenzyme transport and metabolism]. 	MYPDLLDPAHIPLSLYIHMPWCVKKCPYCDFNSHALPSQVPFENYIEALLSDAVSQQSLVSNRQIDTVFIGGGTPSLLPIESFKRLFDGLRLIYDFAPTCEITLEANPGTLEHSPFDEYLTIGINRLSIGVQSFDHNALTVLGRIHNPDQASNAIRAARIAGFDRVNADLMYGLPNQNPSKAVNDIQTAIDAGATHLSWYQLTIEPNTTFYRTPPQLPDEEIMAEIETLGQSVLTKHGFYNYEVSAWHGPNDAPCQHNLNYWQFGDYLAIGAGAHGKLTLKNHPDYQDGIYRYQKSRQPKDYLAFEDAPKMVNFERISDDNLPFEFMMNALRLKDGVSTDVFETRTGLLISTIDNEMLPLQHQGLMVLDPLRIAPTRLGFRYVNYLVSQFI*	mmseqs_cdd	nonviral_gene	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0054	persistent	direct	high	1175	0.999	GCA_009379155.1_00663
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	216854	218029	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	46160	47335	GCA_009379155_1_9_214	GCA_009379155_1_9_214	-	333689	.	PDB:1OYW_A	ATP-dependent-DNA-helicase	MTETTVKNFDDLPLSEPILKAVQALKFDQLTPIQAQILPHTLANQDAIGQAQTGTGKTATFLITIIESLLKRPFQADEIRYLGEPRALVLAPTRELAQQILADCRELTRFSQLYNLCITGGSDFDKQLEQLHKRPLDILIGTPGRIIDWVNKGELFLDRVEVFVLDEADRMLDMGFIPDIKRIVRHMPSNTERQSLLFSATFNQDVMNLAYRWLHQPAFVEIAPESKTNQAIDQQFYLVTEREKTSALKQILADDSVKKTIIFANRKDQVKRLYDYLRRHHKVTMLSGDVAQQKRERYLQRFKDGEVNVLVATDVAGRGIHVDDVTHVINYTLPDMPDDYVHRIGRTGRAGLSGVSISFVSENDAFNLPALERHIDQKFKLNQFEFLDEHK*	common_virus_hmm	common_virus	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0055	persistent	direct	high	1175	0.999	GCA_009379155.1_00664
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	218060	218500	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	47366	47806	GCA_009379155_1_9_215	GCA_009379155_1_9_215	-	333689	.	.	hypothetical protein	MMMKNKWMRGLAILVLSLPTVTYAKTAAPKASEAPEVSLTQEEQMAIDFCDFSAYGVMHIAGDHQGGATKSEALTNHDKRMAELKDLIDLDPETATMLDKYWKGAIDRIFQESVQKTDAEKQAFVMGVGESSFYSCLDQVLKTPKN*	.	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0056	persistent	direct	high	440	0.998	GCA_009379155.1_00665
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	218850	219728	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	48156	49034	GCA_009379155_1_9_216	GCA_009379155_1_9_216	+	333689	.	TIGR02139	sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]	MLNQPIPLKNRARRVMPFFGLSMGISIFALGLLVILPFLMMILTTLQMSFDDIMQTIREPQVFAAIKLSLSMAMLATLTNLIFGTLAAWVLVRYEFWGKSFLNALVDLPFALPTAVTGIALATLYAPNGLFGQWFTHLGILLFNEPIKIAFTPIGIWLALVVVSFPFIVRAVQPVLAELSVEFEEAAAVMGAGRLTTFCRVILPEISPAMLIGAGMMFARATGEYGSVIFIAGNIPMQSEILPLIIVSKLEQFDVTGAACVSLFMLLISLVFLFTMNFIQWKLSARLGAKTN*	mmseqs_cdd	nonviral_gene	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0057	persistent	direct	high	878	0.999	GCA_009379155.1_00666
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	219773	220612	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	49079	49918	GCA_009379155_1_9_217	GCA_009379155_1_9_217	+	333689	.	COG4208	ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]. 	MSHTSSYSYQKNPATRDKPWVRWSLIGIAVVFMGVMLVVPLVSVFYEALKEGWQAYQAALLEPDALASIKLTLITAAIILPINTIIGVALAYLITRHQFRGKFVITTLLDLPFAVSPVVAGLMFVLVFGANTRLGGYLESMGIQVIFATTGIVLATLFVTFAFIARELIPLMQAQGDSEEQAALTLGANGWQMFWKVTLPNIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTVPLMIEIAYNEYAFTLAFALSSLLALLALITLVAQGLMSHKK*	mmseqs_cdd	nonviral_gene	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0058	persistent	direct	high	839	0.999	GCA_009379155.1_00667
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	220705	221424	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	50011	50730	GCA_009379155_1_9_218	GCA_009379155_1_9_218	+	333689	.	COG1118	ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]. 	MSIKIQNIHKTFGDFVALGEISIDISTGELTTLLGPSGCGKTTLLRIIAGLENADNGRIYFDSIDVTDIPVQHRGIGFVFQQYALFRHQTVAQNIAFGLTLLPRNTRPSANTIDRRVDELLDLVQLSHTKTRYPHELSGGQRQRVALARALATEPKLLLLDEPFGALDAKVRKSLRDSLKDIQREIGITSILVTHDQEEAQAISDKIVIMNHGQIEQIGTPSKLFAQPSSDFVVDFLGL*	mmseqs_cdd	nonviral_gene	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0059	persistent	direct	high	719	0.999	GCA_009379155.1_00668
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	221466	222884	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	50772	52190	GCA_009379155_1_9_219	GCA_009379155_1_9_219	-	333689	.	PDB:3BH0_A	Helicase-ATPase	MAKAKSSYICQNCGAIYGKWAGQCTDCGEWNTLVEAPNTSLPHHHKSKTTTAPRKTANYAGAVSAVMTLDHVGVTLETRMPTGIGEFDRVLGGGLVAGSVVLIGGDPGIGKSTILLQTAINMAAGDSLSGSALYITGEESLSQVAMRAVRLGLPTDRLRVLAETNVDTICAALTTEQPAIAVIDSIQTLFTEAIQSAPGGVAQIRESAAVLTRYAKQTGTALFLVGHVTKEGALAGPRVLEHMVDTVLYFEGESDSRFRMIRAIKNRFGAVNELGIFGMTDTGLKEVANPSAIFLSRYDKPIAGSVVMVSREGTRPLLVEVQALVDDSQGQPRRMALGLDYQRLSMLLAVMHRHGGIHTSGMDVYVNVVGGVKVMETGSDLAVLIACASSIKEKPLPVRLCVFGEVGLSGEIRPVPNGQERLKEAMKHGFTHAIVPRANAPAANHPQFKNIQIIAVDRLDEAIYQAFEINAG*	rep_hall_hmm	common_virus	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0060	persistent	direct	high	1418	0.999	GCA_009379155.1_00669
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	223182	225014	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	52488	54320	GCA_009379155_1_9_220	GCA_009379155_1_9_220	+	333689	.	COG1274	Phosphoenolpyruvate carboxykinase, GTP-dependent [Energy production and conversion]. 	MTAKITAPDFVRHQALIHWVAEIAALTKPAAIEWCDGSEEENQRLIDLMIKNGTMIKLNEDKHPNSYLAFSDPTDVARVEDRTYICSKEEIDAGATNNWVEPSQMRTKLNDLFDGCMAGRTMYVVPFSMGPLGSHIAHIGIEITDSPYVVVSMRKMARMGKEVYDVLGADGEYVPCVHTVGSPLTEGQKDVAWPCNDDKYIVHFPETREIWSYGSGYGGNALLGKKCLALRIASAMGREQGWLAEHMLILGVTNPQGKKHYIAAAFPSACGKTNFAMLIPPAGYEGWKVETVGDDIAWIKPSEDGKLYAINPEAGFFGVAPGTNTKTNSNCMSTLGSDVIYTNVAVTDDGEVWWEGKTKETPANLTNWKREPHTGAERAAHANARFTVSAKQCPSIDPQWENPEGVPISAFIFGGRRADTVPLVSEAFDWVDGVYKAATMGSETTAAATGQQGVVRRDPFAMLPFTGYNMADYFNHWLQMGENLGKKAKAAGNQLPKMFKVNWFRRDTNGDFVWPGFGQNMRVLQWIIERCEGTANAVRTPIGLVPTYDDINWDQSDFTKAQFELVTSQDKDAWIKELESHAELFDKLGERMPTALKAHNAKLKADIEQA*	mmseqs_cdd	nonviral_gene	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0061	persistent	direct	high	1832	0.999	GCA_009379155.1_00670
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	225171	228041	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	54477	57347	GCA_009379155_1_9_221	GCA_009379155_1_9_221	-	333689	.	PDB:5EMI_A	Cell-wall-hydrolase-autolysin	MKKHTKSSISTQILKPLSLAISSCILVACSSTGTPAKPVSQTPKPIPQAKPSQQINISSGNTNLGNTKTGADVDVLDVQMLDALEALLQATDMSMVEGDELAIQRYGNLWDRVRRGYRINEMTNARIEAQKSWFYTRQTYLDRLTARASRYLHHTVAEAERRGIPSELALLPIIESSYDPTATSNAAAAGLWQFIPSTGRIYGLNQSATYDGRRDVIESTRAAYDFLTSLYNQFGSWELALAAYNAGPGRVSRAIKANQDQGLPTDYWSLKLPTETMNYVPRFLAVAQIVRSPNTYGINLPAIANHSHFRTVPVNYGVSLSEVATVTGLSVSELRLLNPALLNFTVDEIGPNRIVIPDSLPNQIDNQLASLKGYGFGGDYIATAPAQSITYVVPKSGATANTSSQQELIAANTLPTTIAQVTPNNTIVQEPALSKSEINLIAAEIQKTSPEVPAISPQDGNIQLNAVQTGQSVLDARGETKMLSFADGPKTQAVAQQPTQPVQVAVTPPAQPVQITVVSPTPEPISQPKPQLPPVTASIPVVSSPPVLVPPPPSRPRPEPASRPKPKPESYTVRAGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKRQPVSAQTPSRQSTSTANTNSATHKVSAGESLTAIARKYNISLHALAKENGLSVTDGVLIGQTLKLPSDAKTANTTMANTSSSPSVNKPESYTVRAGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKRQPVSAQQTSQATQSTKNNQSTATHRVQSGESLTAIARRYNISLHALAKENGLSVTDGVLIGQTLKLPSDAKAESSTPSRLGNTKNNSTRTPANTNIGITENYTVRSGDSLTMLSNRFGVAIGDLATANGLASNANLRIGQTLKVPKLTTTYTVKAGDGLIALARRYGISTQELAKMNNLEPTADLRIGQVLTVPNK*	common_virus_hmm	common_virus	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0062	persistent	direct	high	2870	1.0	GCA_009379155.1_00671
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	228236	228841	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	57542	58147	GCA_009379155_1_9_222	GCA_009379155_1_9_222	-	333689	.	PF13474.6	SnoaL-like domain	MAYSFIDKYIEYKGWFMKYSTRSVLRKAVAASMLTAVIRSAIQLTGKSFGKGASIGLFIGMIGVQSLITTNAYAISEQDVSQYASSMSSAANAQNIAQISRLIDDDAIISLSRGGKTTSLDKEGYLQLLQKSWATSSDYRYRINVADVVVTGNQARAQIVTTETWTQDGKPVTIKTASRATFSQVGNNAVLLRSVSQVTVD*	hhsuite_tools	hypothetical_protein	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0063	persistent	direct	moderate	558	0.921	GCA_009379155.1_00672
GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote	cenote	CDS	228947	230155	GCA_009379155.1	RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155.1_RCKD01000002.1	GCA_009379155.1|RCKD01000002.1	GCA_009379155_1_9	GCA_009379155_1_9@C14	58253	59461	GCA_009379155_1_9_223	GCA_009379155_1_9_223	-	333689	.	COG4536	Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains [Inorganic ion transport and metabolism]. 	MPRPRTQNLANLSFVSIAIFTVSVAAIFIPSTAFAAFELGGTPTNLALLIFFICLSLVVSFLCSISEATLLTMTPSYIDTLEEDNPKGAALLKSVKVDHIEKSISAILTLNTVAHTLGSLGAGAQAVIVFGNAWFGVFSGVMTLIILIGTEIIPKTIGTVYWRRFAMPVAYYVRTINVALLPVIWVTEKISRMLTRGNQEIGFNRHEFLALANQGESLGQMSEMETRIIKNSLALGMINVEDILTPRSVVSAFDENMTVGDVFASYPKLPFSRFPIFDEDLDNATGFILKSDLLIAKANQEIHTPIKQFRRDINFVFAKMKLFDLLDLMLKEQVHIALAVGEFGEVKGLVSLEDVLETLLGLEIVDEFDRVDDMQILARQLMDKRMARLGAKLEEDAPFDEK*	mmseqs_cdd	nonviral_gene	C14	59461	170695	230156	GCA_009379155.1|RCKD01000002.1@region_170696_230156@tool_cenote_CDS_0064	persistent	direct	high	1208	0.999	GCA_009379155.1_00673