core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	68762	68959	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	1	198	GCA_009379265_1_1_63	GCA_009379265_1_1_63	-	114260	.	NF033499	excisionase Xis. Members of this family are excisionases such as Xis from the Gifsy-1 prophage of Salmonella enterica subsp. enterica serovar Typhimurium str. LT2.	MKKYLTSNEICEIFGICKMTLNRWEKRYPHGEPFPRPVMGGGLGGGVKRYLSQEVHTWELKHTAK*	mmseqs_cdd	nonviral_gene	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0001	shell	direct	high	197	0.995	GCA_009379265.1_00063
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	69128	70099	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	367	1338	GCA_009379265_1_1_64	GCA_009379265_1_1_64	-	114260	.	PFAM:PF03837.13	RecT-protein	MNELTTSQNQIVLDDGLFNKCHRLAEIMASGSCTIPKHLQGKVGDCFAIIGQSIRWGMDPYAVAQKTHLVNGTLGYEAQLVIAVINAKAPIVGRLKFDYFGDWSKVKSKDDKSDDVGVVVSAIIQGDTEPTTLSISMAQVGSVRNSPLWIADPRQQLAYLGAKRWARLHCPDVILGVYTPDELSEKGNAPKPIQATVKDINDMVNQAVSHVAQIEHIDTASIAEQIGKAHDLDELAELAHQVAKYRESGSIDESQRQNLLSAYKAKKLYFDLRHSIADVTLDNANAAREMLFKQQHNLSPDDFESLDNHLDARLNTLAAEHEN*	common_virus_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0002	cloud	direct	high	971	0.999	GCA_009379265.1_00064
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	70096	70371	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	1335	1610	GCA_009379265_1_1_65	GCA_009379265_1_1_65	-	114260	.	.	hypothetical protein	MNKKHAQQQYIDHLKRQLDISHRMIDELKNANHAMRLHISDLKSEISANNQALGELAKILCELDQMIMHPNDAVMSHFIHIYRENKQGITL*	.	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0003	cloud	direct	high	275	0.996	GCA_009379265.1_00065
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	70364	70528	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	1603	1767	GCA_009379265_1_1_66	GCA_009379265_1_1_66	-	114260	.	.	hypothetical protein	MNMKKIKKITTIVEIYEVPAETVIAYGSMPILPNDPIETHLWHNFQAVQGENHE*	.	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0004	cloud	direct	high	164	0.994	GCA_009379265.1_00066
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	70602	71348	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	1841	2587	GCA_009379265_1_1_67	GCA_009379265_1_1_67	-	114260	.	pfam04383	KilA-N domain. The amino-terminal module of the D6R/N1R proteins defines a novel, conserved DNA-binding domain (the KilA-N domain) that is found in a wide range of proteins of large bacterial and eukaryotic DNA viruses. The KilA-N domain family also includes the previously defined APSES domain. The KilA-N and APSES domains may also share a common fold with the nucleic acid-binding modules of the LAGLIDADG nucleases and the amino-terminal domains of the tRNA endonuclease.	MNLIISIPTQADFIVREIGGLYSLNDLHKASGNEKRHEPYGFLRNQETQDLIHAIEQDGTVAYNTIIGKGKAQGTYVCRELVYAYAMWISPKFHLMVIRAFDTMTKGENIPCLAKPTNTITSQDVSNIKHLVHLCGTPLHASGSARFAIHARLRELTGTTGGQAYTTEHLLLIADELVRIYHVLNQYGTKRRAIEADIIRHVIRGERDEMLPVLLDEMDKLAELRADSFFPTVDKLIAEPVRRLLNHQ*	mmseqs_cdd	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0005	cloud	direct	high	746	0.999	GCA_009379265.1_00067
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	71714	72166	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	2953	3405	GCA_009379265_1_1_68	GCA_009379265_1_1_68	-	114260	.	COG5346	Uncharacterized membrane protein [Function unknown]. 	MSQKQRKGTRVQATQDERGLQTQFEQVEEYSPYPPAEFLHELNKIDPKYVEQVMQMAKTEQEQRHKLQTSQISEMVRVNTALMDFDKQNVSLMARGQWFGLALGLGLLTVAGFAVRFGQTAVAIVAISAIIGILIVYVLRQQPKNPPSNQ*	mmseqs_cdd	nonviral_gene	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0006	cloud	direct	high	452	0.998	GCA_009379265.1_00068
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	72147	72353	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	3386	3592	GCA_009379265_1_1_69	GCA_009379265_1_1_69	-	114260	.	.	hypothetical protein	MSKLSPFLEGMLSAFVLLPSAEPRYIYPTDIKPSDTAQDWQAVGTDVSNASKKVGNSLGMVRYEPKTA*	.	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0007	cloud	direct	high	206	0.995	GCA_009379265.1_00069
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	72366	72563	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	3605	3802	GCA_009379265_1_1_70	GCA_009379265_1_1_70	-	114260	.	.	hypothetical protein	MLKKSKTKVLIPKKERLLTAQAYLLDIEQRQDIIKEVEFVPPKLGKAGFGSFRVRYDTPICFPHN*	.	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0008	cloud	direct	high	197	0.995	GCA_009379265.1_00070
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	72638	73447	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	3877	4686	GCA_009379265_1_1_71	GCA_009379265_1_1_71	-	114260	.	PDB:3H4R_A	Exonuclease	MSNLIHNLSNADYHAHPAVSSSQLKHMLRTPAHFKASLETSKEPSDAMKLGSLVHTLLLEPHLVDYEYTVMPKFDRRTKQGKADYEAWLERNAHKSIITADQMDTATAMTDSLKQSSVAKLLKVNRTLIEASIFYTDQDTGIDCRVRPDFLITPCDSFPNGLIVDLKTTDNASPSAFKRTITNFGYHLSAAMYLDGYEAHFGTCPAYIWLVAERDAPYAVASYTPSDEMLERGKADLDTALARLKACRDADSYPAYSSEIVAIDLPKWA*	common_virus_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0009	shell	direct	high	809	0.999	GCA_009379265.1_00071
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	73444	73710	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	4683	4949	GCA_009379265_1_1_72	GCA_009379265_1_1_72	-	114260	.	.	hypothetical protein	MSKLRKRYINRGIVNFTVVYSIGRDATKIIHAIFMYLECGNPPREVCCNRKEIREYCTKLLNLQDFVFFQDFCPHLFKEFEQDKGAIA*	.	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0010	shell	direct	high	266	0.996	GCA_009379265.1_00072
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	73707	73868	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	4946	5107	GCA_009379265_1_1_73	GCA_009379265_1_1_73	-	114260	.	.	hypothetical protein	MRSTIQTVIFIVIMMFMLKGCLYAFDHECKIQEELGRQYYEESIHLQRENPNP*	.	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0011	shell	direct	high	161	0.994	GCA_009379265.1_00073
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	74257	75276	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	5496	6515	GCA_009379265_1_1_74	GCA_009379265_1_1_74	+	114260	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MTKIEAVDLFCGVGGLTAGLIRAGIKVKAGYDIDAACRYGYEYNNDATFVQKSVADVTADEIESWYSDGVVRLLAGCAPCQPFSTYNNGKDTSMDKKYPLLYHFARLIDEVYPELVTMENVPDVTKHQVYHDFVAKLESLGYQVSAQKVECVKYGIPQDRKRHVLLASRIGKIGLIPITHESPVTVQEAIGHLTPIVAGQRCSEDSLHLSSGLSELNMMRIKASKQGGSWRDWPEELVAECHKKSSGKTYGSVYGRMSWDKPAPTMTTLCTGYGNGRFGHPEQDRAISLREAAIFQTFPEDYQFAERINMTAISRMIGNAVPVRLGEVVGMSFLTAVVY*	common_virus_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0012	shell	direct	high	1019	0.999	GCA_009379265.1_00074
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	75273	76013	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	6512	7252	GCA_009379265_1_1_75	GCA_009379265_1_1_75	-	114260	.	PF18737.1	MAE_28990/MAE_18760-like HEPN	MIKIQNRYLKVAYEEFEIRLHEVESYIDFVEKISTIDDPCLTSSKSDFSEASYEINRELTKTLRASSYLMLYNLLESTMSNAIDSIYETIKSEQCDIMNLSKKLHKIILKNLQKGLTQEKITELSNNHLDHRERLFDLGYNKKKLFSGNIDCKIISEYCQKYDFELCPIPQEDKKSACWDKNAILKIKTERNNLAHGSVSFETCGGQMAVESLRSNLNNVRAVLLGVFNGLDIYMNEKKYLKNPNT*	hhsuite_tools	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0013	shell	direct	high	740	0.999	GCA_009379265.1_00075
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	76006	77142	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	7245	8381	GCA_009379265_1_1_76	GCA_009379265_1_1_76	-	114260	.	pfam03235	Protein of unknown function DUF262. 	MQQYVISTFDEEAIKREISENQKQFDFDIREYPIEVLVQKFNPSKQTEPEIFIPDYQREFVWDLQRQSLFIESLLIGLPIPYIFVADIVDDEQDYVDGRVEIVDGTQRMQTIYAYVNNHLRLQGMQRLHSLEGSIFNDLPLAQQRRFNRTTIRLIELKNIDEDGRRMMFGRLNTGGSKLTDMEVRIGSGDSPFVNFLKTLAENKEVQKLICVAKNKENRREREEYILRFFAYRERYTNFGTRNDGSTDNSVSGFLNDYIESMNEDTNFQTVKKPEMEKQFFEMLKFVQAHFAHDFRKSKNAKSISRIRFEAISVGSSLALEENQNLIPSDTNWAYIDKEFLTMMRSDASNSKPKIIKRIEFVKNKLLGREINLDRQDD*	mmseqs_cdd	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0014	shell	direct	high	1136	0.999	GCA_009379265.1_00076
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	77223	77927	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	8462	9166	GCA_009379265_1_1_77	GCA_009379265_1_1_77	-	114260	.	PDB:2FJR_A	Repressor-protein-CI	MQDFSIRLNQAMSAKNLSLRDLSEKTGINYEMIRRYSKGQAKPRNDKMKLLAQCLGVPITWLDYGEGEMTKNNDKLTPITEWDDSTPLDDDEAEIPFYKDIAFACGYGAVNDDVTHETRKLRMGKRTLSNLGVMPENAFAVTARDDSMMPYVQDGDTIYIDKGRKEVKDGRIFAIRFGELCLCKRLYRLPDGGVRIVSDNAAEFPEQVATKQQISDGEFEVIGWVWSVSRLERW*	common_virus_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0015	shell	direct	high	704	0.999	GCA_009379265.1_00077
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	78055	78285	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	9294	9524	GCA_009379265_1_1_78	GCA_009379265_1_1_78	+	114260	.	COG4197	DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily [Transcription]. 	MTALDKAIAILGNRSALARSLGITPWALSKWDKNNPPRDRCLAIEQATGGKVKAEDLRPDINWEYVREQQKTPSYR*	mmseqs_cdd	nonviral_gene	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0016	shell	direct	high	230	0.996	GCA_009379265.1_00078
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	78325	78729	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	9564	9968	GCA_009379265_1_1_79	GCA_009379265_1_1_79	+	114260	.	.	hypothetical protein	MNEFIIPNFNFVSNAFSKCRTDLDAQEREIAEFIKKGGKVINLNKEQTKKMVCKAHACRQYKNPNAKIRLLLSHLQKTGEHMTSAQIKKQFGIKAAGSAVSRFNQREGKTLIKNKKLRDSTNHIYCVYYAAEVN*	.	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0017	shell	direct	high	404	0.998	GCA_009379265.1_00079
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	78729	79556	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	9968	10795	GCA_009379265_1_1_80	GCA_009379265_1_1_80	+	114260	.	COG3756	Uncharacterized conserved protein YdaU, DUF1376 family [Function unknown]. 	MHYYSHNINDFNNATIHLSVEEECMYHRALAWYYSNELPLPSDKNKIYRYLRATTKKLQKAVDMVLEDFFILEDDGYHQARCDEEIAEYKKKQEVASNAGKASANARKKKAEQDENNQQANDEHHINDRSTAVQQEINDRSTTVQPTNNHKPITNNIYTHTNAREQNFCSLADWQPPPMQEMQSELLRAGVNVTLNASQYQITLQDFKAYYDNQATLGKPLNTDFVRRQKFRQWLSRSDSKKPTNRTDELAAMANNFGENFYSKNANPKLGVTHE*	mmseqs_cdd	nonviral_gene	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0018	shell	direct	high	827	0.999	GCA_009379265.1_00080
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	79561	80163	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	10800	11402	GCA_009379265_1_1_81	GCA_009379265_1_1_81	+	114260	.	.	hypothetical protein	MIQIHSPSHLVAVIQGLAVGSFEKRYGAMKTADVVNIFAFVTQDLTPEQLVVGINTMVSKGFCPDAALFRRWCLGLASFSHDDAISDSYRGKSGALGNILKWIAHPKNTVITVAEKQAYDATYHLWQDIKSEHDKWRAENAFKDEYELIVNRFVKDGITCQVYTPPPAIENKPNDEHWPVSKDRQDEIFATLGKITGRLV*	.	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0019	shell	direct	high	602	0.998	GCA_009379265.1_00081
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	80266	80658	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	11505	11897	GCA_009379265_1_1_82	GCA_009379265_1_1_82	+	114260	.	PFAM:PF06356.10	Endonuclease	MMRPDEHALFTKFTGIKFVKYKNKKTQIDGITFDSKKEAERYKVLKSMQADGLINDLECQPKFILIPSQYFETIGRRERGVDYVADFRYKDNLGQIIVEDVKSAITAKDKVYRIKRKMVKYFHDVEIIEV*	common_virus_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0020	shell	direct	high	392	0.997	GCA_009379265.1_00082
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	80655	80840	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	11894	12079	GCA_009379265_1_1_83	GCA_009379265_1_1_83	+	114260	.	.	hypothetical protein	MRYYYNPSTDQYAKVLGEDANSNFVTVVIDDKQQVMDWDEFVGQFNQLVDVYEDKSAEISR*	.	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0021	shell	direct	high	185	0.995	GCA_009379265.1_00083
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	80837	81076	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	12076	12315	GCA_009379265_1_1_84	GCA_009379265_1_1_84	+	114260	.	PFAM:PF11753.7	nucelotide-kinase	MMNELKQTENDAVNHPSHYTSDPSGIECIQITRHRNFNIGNAIKYLWRAGLKDGNSDIQDLQKAVWYIQDEIKRIKGAV*	common_virus_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0022	shell	direct	high	239	0.996	GCA_009379265.1_00084
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	81073	81444	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	12312	12683	GCA_009379265_1_1_85	GCA_009379265_1_1_85	+	114260	.	PFAM:PF06530.11	anti-termination-protein-Q-like	MNEYREWGKWVRDNPDCLKTKSTWLMVERSKLPANRRVYVMTDDRGLQIDRGVSELARYCSVSANVFMMFYVWGWSHEKIAVRYLSAIGYRGKSRASRHDVRSALIKAESFLAGLLHKLYSFT*	phrogs_hmm	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0023	shell	direct	high	371	0.997	GCA_009379265.1_00085
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	81998	82453	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	13237	13692	GCA_009379265_1_1_86	GCA_009379265_1_1_86	+	114260	.	PFAM:PF05119.11	Small-Terminase	MKGRKPKPTAIKELTGNPGKRALNKNEPKFAQITEIEPPVWMTGTAVTMWCTVMPELLATGVLTVADVHNVEAFCMSYSRWREAEQEVERYGLVIMDDNGKLNKNPALTIINEAKTQMMKFGSLLGLDPSSRTRLTGAANSEPIANPFADL*	hallmark_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0024	shell	direct	high	455	0.998	GCA_009379265.1_00086
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	82450	84144	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	13689	15383	GCA_009379265_1_1_87	GCA_009379265_1_1_87	+	114260	.	PFAM:PF03354.14	Large-Terminase	MTYPNVQKALDYIHAVLSGEIIANKYIKLACQKHLDELKNSETNPDYPYFFDPAKAEKVAKFIQLLPHTKGKWASKGEKIALESWQIFACCLPFGWIKRATGFRRYTKILIFVCRKNGKSAIAAGIGNYMFCADGEFGAEVYSGATTEKQAWEVFRPAKIMVERTKALKDFYGIEVNASNMARLADGSRFEPIIGKPGDGSSPSCAIIDEYHEHKNNDLYDTMETGMGAREQPIMLVITTAGSSIGGACHQMVRDAEKMLDGVMDIPDLWAVLYGMDKDDDWTSEIALKKANPNMDISVSAEFLQARQRDAKMSAAKQAIFRTKHLNEWVGAKNAWLNMAKWANAPERLPLSALTGRPCFIGLDLATKIDMVALILLFPPTADDPNYHVHGRYYLPDVRVLEELDSNTERYRAWDADSLLTLTMGEVVDFDAIKDDLREFYGRFDVQEVAYDPWQATQLAQEMEKEGMVMVELRHTVQNMSEPMKELEALVLQKRLAHGDCPILTWQASNVVATLDKKDNIYPNKERAENKIDGMVALIMALSRAIVHTDTGNVDEFFDNMIIA*	hallmark_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0025	shell	direct	high	1694	0.999	GCA_009379265.1_00087
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	84223	85434	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	15462	16673	GCA_009379265_1_1_88	GCA_009379265_1_1_88	+	114260	.	PDB:8CEZ_K	Portal-Protein	MNDENWWSRFYARLFGGGKRLDKGSEVAPFNSMHMPSGTAVTAETALKLSAVWACVRLRSQTIASLPLHLKSDSKELATDHHLYRILHDSPNADMTASEFWESVIVSLDLWGNAYVYITRLGGRVVSLDILDPSITVVKRNRDGDISYKVGEDIFGAEDVLHIKGFTMDGLVGLSPIRYQAGVMGAQIDANNAASHTFGNNLKAGGFLQTDNILNSEQRQKLRGNLEYFSKPENAGKYMVLEAGMSVSSSGVKMNPSDAQLLETRYFGIEEICRAFGVPPQLIGHTDKASSWASSLEGMNLGFLTYSLRPTLERIEQAIRKKLLSPSERSQYSPKFSVEGLLRADSQERANFYTTMLQNGVMTRNEVRALEDLPPMSGGDSLTVQLNLTPLEKLGQDHENQIN*	hallmark_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0026	shell	direct	high	1211	0.999	GCA_009379265.1_00088
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	85415	86065	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	16654	17304	GCA_009379265_1_1_89	GCA_009379265_1_1_89	+	114260	.	PFAM:PF04586.16	prohead-serine-protease	MKTKSINFEPSIVKDDGFFSGYCNVFDVVDSYGDSVQKGAFVKSLAKFETRSKMPPILWQHDRAQPIGVWTALKEDEHGLYGEGKLLIDDVPKAREAHALIKAGVIDGLSIGYRVEQADYDNTKEVLLLKELDLFEISVVTFPANDASTVTVVKSALAQGQLPTLSEFEKFLRDAGFSKSQATAIASHGLRQLLGEPAELKDALQIIKSITGDINV*	hallmark_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0027	shell	direct	high	650	0.998	GCA_009379265.1_00089
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	86058	87239	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	17297	18478	GCA_009379265_1_1_90	GCA_009379265_1_1_90	+	114260	.	PDB:3QPR_G	Major-Capsid-Protein	MSDMTKQLATELAKATDYVKGLGEELTGRLEKGENNLSTLKGDVDEALKSMGDVKARLDAIEQKQARRAQNQEPEKSLGERLFESDAFKQFADNPTAGNRAKLNIKATITSATTDTSGAAGALVQTQRLGGIVAPPDQRLRVRDLLMKGTTDSNALEYVRETGFTNSAAAQQNEGDKKAQSHIKFDTQSVSVRTLAHYVKASRQILDDASALASYINGRLIYGLKLVEDRQLLNGDGENGNLKGIIPQATAFADKATLSTYTIIDQLRLAQLQAVLAEYPASGIVLNPIDWAKIELEKDADNRHIIGLPQGTANRTLWGVPVVETTAMGTGKFLTGAFNLGAQIFDRQQAAIAVATENEDDFVRNLVTILCEERLALAVYRPEAFIYGDLVAK*	hallmark_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0028	shell	direct	high	1181	0.999	GCA_009379265.1_00090
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	87471	87704	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	18710	18943	GCA_009379265_1_1_91	GCA_009379265_1_1_91	+	114260	.	.	hypothetical protein	MEYEVLKQHYGDKQYYEGDIRQLDDDFTAKRLIEFGLIGKAHANKKVQSKAKKVPSNKAEPVLENKDDDSDDTEDNT*	.	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0029	shell	direct	high	233	0.996	GCA_009379265.1_00091
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	87682	87969	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	18921	19208	GCA_009379265_1_1_92	GCA_009379265_1_1_92	+	114260	.	PFAM:3JVO_G	Head-Tail-Connector-protein	MTQKITLEMVKHQCRIDHDDEDDLLMHYLNAALIHASNYIDGLLDESNLAVQQAVLLLVGHWYDNREAVNNDYQTPQSIPFGFEALLQPYRNLGV*	hallmark_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0030	shell	direct	high	287	0.997	GCA_009379265.1_00092
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	87969	88295	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	19208	19534	GCA_009379265_1_1_93	GCA_009379265_1_1_93	+	114260	.	PDB:2KZ4_A	Head-tail-adaptor	MQAGKLKDRVSFMQHLQSRSQTGAPKRTWSVIDTVWGQFTPVSAKDVIAGKAAGVEILARLKIRYRDDIKRNMRVVCRGRAYDIIGEPLADNKSGREYLTLLLQGAEQ*	hallmark_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0031	shell	direct	high	326	0.997	GCA_009379265.1_00093
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	88292	88834	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	19531	20073	GCA_009379265_1_1_94	GCA_009379265_1_1_94	+	114260	.	PFAM:PF04883.11	tail-component	MKLIGAEELGKKLKQAREEITNKQAGSALYSSLMYASLPMYKYVRSQAPMTKAPYRRYMSYGQGDGFYYDKNGKKRRRRAKRGTGKYEIQESGLYHKSIKRRRLTRGKSANLDGAAIAIYVAEGSGKTHGSAYYWFFNEYGTKYQAARPIFRPAFNSGAEDAADRFKNKLGERIDKIMGG*	hallmark_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0032	shell	direct	high	542	0.998	GCA_009379265.1_00094
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	88834	89181	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	20073	20420	GCA_009379265_1_1_95	GCA_009379265_1_1_95	+	114260	.	PFAM:PF05657.10	tail-component	MIASKRIFGLLGELVNDRVYPLFVPETADSTPPFMVYTLVSNVPDNTLDGATGHEWVGVQIDIYAADYDETIALAQEAVKRLNTIKPSEYGGVVYVHDDGLYRAIIEYEFWQTIA*	hallmark_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0033	shell	direct	high	347	0.997	GCA_009379265.1_00095
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	89191	89637	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	20430	20876	GCA_009379265_1_1_96	GCA_009379265_1_1_96	+	114260	.	PFAM:PF16461.4	tail-tube-protein	MAETNTVENAKDSFYQLFVSATNTSSSFKKIERLTSCGVPSEAKVLDDITATDDRRQVNAVVDYKENSEVEFEYVLLPEDETHKLLQKSFESGRELYFQLKFMEATSESRQFKGIIAELTTDAEDTKKKLRKKGRITITGDTTKELTE*	hallmark_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0034	shell	direct	high	446	0.998	GCA_009379265.1_00096
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	89685	90014	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	20924	21253	GCA_009379265_1_1_97	GCA_009379265_1_1_97	+	114260	.	CDD:pfam16459	Tail-assembly-chaperone	MSNLKNDLLKALSNLGTPTAYDIDGIGTVHIKKLTVEEQGKLMHDKGDDVKSSLRLVTFSVCDEEGKRVFAENDIKDLGKMHADTLTKLIEAIREVNGFDAKVDDLKKD*	hallmark_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0035	shell	direct	high	329	0.997	GCA_009379265.1_00097
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	90065	90337	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	21304	21576	GCA_009379265_1_1_98	GCA_009379265_1_1_98	+	114260	.	PFAM:PF06223.11	tail-protein	MTVAELASKMSYAEFLEWQAFHDIDPIGGYRGDIQAATIAASMGGGKLSDYMIIDPNPMTDEQRQEYEQQREAQKARIQVAEMIAMFNSM*	phrogs_hmm	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0036	shell	direct	high	272	0.996	GCA_009379265.1_00098
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	90397	90576	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	21636	21815	GCA_009379265_1_1_99	GCA_009379265_1_1_99	+	114260	.	7MUY_IN	Dot/Icm, Secretion, T4SS, TRANSLOCASE	MNKFLSVLSAFATVFVLSSSPAMAKNTPCSGKKGGVSHCSNGKFVCKDGSISASKKVCK*	hhsuite_tools	nonviral_gene	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0037	shell	direct	high	179	0.994	GCA_009379265.1_00099
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	90585	91223	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	21824	22462	GCA_009379265_1_1_100	GCA_009379265_1_1_100	+	114260	.	.	hypothetical protein	MKKLLKWLGIIFAVFLGIGALAVALETPEQKAEREAQAAEEKAQREAEYAAQIDDKEEVQPVNLGMTPQELGSGIDNIIKEISGVDPQLRSVSTNDNIYSVDLGEDIIWYGDLDKTGNIITSMYNVKISDNVEDRMMALLAFAIAKARTLSPDLPKEQVANSVAEVMSRAMKKFNQSLKPTTETQVIGDYKYIVNIYPDSKSMRFSVVHKDH*	.	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0038	shell	direct	high	638	0.998	GCA_009379265.1_00100
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	91520	92404	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	22759	23643	GCA_009379265_1_1_101	GCA_009379265_1_1_101	+	114260	.	PFAM:PF10547.8	P22_AR-protein	MQTQISIFNFESTKQVRTAIRDGGDIWFCLPDVAGILAIKNSRDIVAKQLDKKGVEKIYTPTVGGQQELTFINEPNLYRVIFRSNKAEAVKFQNWVFDEVLPTIRKTGRYVAKSTVSDRTPLRQAVSMLVSRCGLDYGTAYTMVNQYMGTQHIDEIDLADLPRAIAYTHSLMIKPDAKEQGEFQITCHQATNQAMNYLHGLHAEIKRLEGVAPSLDIDEDEIARAIITRMVQGKRFMVNLDYWNNNLNVIMVDQKSWVVQSDDIAKIIADPAGVPKDVLPSIIQAALKRSGLTV*	common_virus_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0039	shell	direct	high	884	0.999	GCA_009379265.1_00102
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	92564	92746	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	23803	23985	GCA_009379265_1_1_102	GCA_009379265_1_1_102	+	114260	.	.	hypothetical protein	MQDNAKKSDATHHSAQLLRDMFSCLNQAMSRETEKFHQEQKKVKEEINRGARITNHRISL*	.	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0040	shell	direct	high	182	0.995	GCA_009379265.1_00103
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	92709	93545	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	23948	24784	GCA_009379265_1_1_103	GCA_009379265_1_1_103	+	114260	.	.	hypothetical protein	MAQELPTTESLFDFLYLDSIKIRSFYAQLTGFGSLASIKANNALNSSLASEGALGVNAMAKIDAKVNYATGENQSSEKTYDATPTLPREMIDKLDELGFISRELGENSAGNLVLLNGVLSITDIETLQNLLEPTMHFATEEEYKQLYGDRKRQAVKKKLEENKPVVQLIKAIPYALEARLKVGEDMVWMTLNRGEMVGNPHDINLKHGKVLFGEYYVLGVLDAIPNDDMNIDMTTGSFGDVILELSQSLKETMGRNTSSYGITPIAIFRVIRTNQQAK*	.	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0041	shell	direct	high	836	0.999	GCA_009379265.1_00104
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	93604	97278	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	24843	28517	GCA_009379265_1_1_104	GCA_009379265_1_1_104	+	114260	.	PFAM:PF10145.8	minor-tail-protein	MAVVSKLQIVLEATTTAFDRGLKQASENLNAFAKKNEEIHNRLERFNRKHEQALSAMRGIGAASAAAMAAVGYGIKSSVNEAMKFESALAEVKKVVDFDSPEGLVNMRRELENLSTQVPIAFDGLAKIAAAAGQSGIAADEIVKFTEAAAKMGTAFDISAEEAGQAMAEMRTAFKMSQLEVETLADKINYLGNNSPNAAANIMQVVQTIGPLGEIAGVSSDQIAAMAASLTGVKPDVAATGLKNMMIQLTKGDSLAKSAKTAFTQLGLSYTNVAKGMQKDSVGTINKVLEAIKKLPAEAQTASINAIFGAEALPVVSQLVTGTETLTKHLQAMGDATKYAGSMNAEAANINATAAAQMEMFKNATQNAKAAIGEAFIPALAGIVEKLTPTINSIKEFAQENPKLVSTITAVTGVILSLGVAIGAIGLAVPVVTTAFGGLSDIGKLLGNAISGISLPMLGIGVAIAGLIVIGVLLYKNWDTIKAKATEIFNNLPEPIKTAIDNIKSYFSSMKAVFDVVLDTAKAFWHGFSTIPLAAFEVIKASVSFGMNAILSIIKAVLTGIAAAFNFGFDIAKAIVETALGVIKGIINGDMNAVVNAIKNGLKTAGNAFNQLRTDVVNTIKQLGTDLYQAGKDAVDGLVKGINDKISAAVAKSKELASGVKNAVTNFFDIRSPSRVMMQVGYWIADGLAVGIKKGAAKTKKEAKKMAEDIKKATDDERINIAKSVYKLQQELKGNPYADFLTDIAFGKYGDAKKFLKSKDYTQISQLKEAEKRLQNIISINDELDGLRESVRSFGMDEIERLEHAYKTSQKYYSATEDDMLEHIGLLKEIQNLEFGNKIDEIREQRNLIGKTEVEQLEYKLKYYREYRHISDVLKKAMIDEIKLKEFETLQSEKKLDLEKKLHMLRGGTETSWLLKQSQFTEEQKKQIEQLTKQIELTEQLAELREKLKDKSVFDVKDAVKSGSFGEGLGGVLEGIAGLGNINAGAIENYAKIEEVFAEEKTKLKQAYEDGLILESEYYEQSKILAEQYADAKEKLLLNATQSTLGGITAITKSAFGEQSKLYRTILAFEKGVAISRSIIAIKTAMAMASANPFPANLGAMATIASQTANIISAIKSVVMPVGQAHDGIMSVPKSGTWNLKKGERVLPRHTAKALDDKLDKIGTGDRPVNVVINNYSGEKTDVQQMPNGDMMVTIGKMISHTVDAKLNQRFIQARRQGGELYGR*	hallmark_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0042	shell	direct	high	3674	1.0	GCA_009379265.1_00105
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	97281	97535	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	28520	28774	GCA_009379265_1_1_105	GCA_009379265_1_1_105	+	114260	.	.	hypothetical protein	MNEKQMLEFAKDIASPFAKELHARSLANVGTILYLSKKGIIDLNDYLNFMNELKEGLMQSDDYEQETKEAIQAEFDFYRERLIG*	.	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0043	shell	direct	high	254	0.996	GCA_009379265.1_00106
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	97619	99817	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	28858	31056	GCA_009379265_1_1_106	GCA_009379265_1_1_106	+	114260	.	PFAM:PF05939.12	minor-tail-protein	MGASASVHHNITKTQFGDGYAQRVSHGINNQRMDWSGSKTGDWQTVILPIKTFLDEHKGVIPFLWTNPHGQTKKYVCENYEISQKKGNFWEISLKFEQSNSDSSSVPLLDFSNQNSGTSTPNLPQSALDDINKKIQDEIERSTQKDDAHDKAIQSLNTSKTSLSKSIDEIKEQLAGVSSAPASVTWDSITGKPSSFNPSSHSHTISDISGLQSLLNAKANSNHSHAWNSITDKPQSFTPSSHVHQASDIADLHTILSKYATKDEIPQINTDGLTIDTSNLATKTSVETLANKVTEASEALKSETKLRANSIAAIDSKITTEVDRSSKKDAEHDDEIASLKRTKADLSHTHTMSEVTDLSAELERYALKTELNNISVDTSHLATKSSVNELSEQIATKADQSHRHTITEVSGLQGILNNKLNSNASARSAQKLTTPRRINGIAFDGTQDITLPTPTANVSWSAISNKPANFTPSAHRHAIGDITNLQRELDNKASRNHSHTWNSITDKPTTLTGYGITDAMRTDTDSETTGLISINRADSYIQGKQGSVRRWYVGSGSSSNHNVQLSNLTHNTQLELTNNRITSNKPLYVGTRRVLLEGDETASTTVQVTNHPTITLTLGATLEMTTFVYSNGRIVHRLNYKNMTKPALTALTSSSSRTKTLTVNLPTAMPRQVVQVNAHFYDSGYIGYASSLLAVWKLSETTNSTVPLKISDTNSSSNFSGFSDLVVTIEGF*	hallmark_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0044	shell	direct	high	2198	1.0	GCA_009379265.1_00107
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	99817	100377	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	31056	31616	GCA_009379265_1_1_107	GCA_009379265_1_1_107	+	114260	.	PFAM:PF14301.5	tail-protein	MHHIKLIDDKGHFEFIHEDFLYLYSDTADFIAIAQEDYQTYVQSVNQELIYQDGKIISLTNQISADEIKQTNQELVWSDIKDKRTKHAHSGVYVASVDKWFHTDESSRIQYLALITLPSLPDNLQWKTMDNSFITLTRPLLTELTSAMLIKEQQDFMNAEQHKQRMMQADNPLEYDYSDGWSAIYA*	phrogs_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0045	shell	direct	high	560	0.998	GCA_009379265.1_00108
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	100370	100819	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	31609	32058	GCA_009379265_1_1_108	GCA_009379265_1_1_108	+	114260	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MHRKVYLALYKGRADKFSYRFYDAVTRFFTRGQYSHCEIAVHIHNNIYQCYSSSIRDGGVRRKSMMLDDKWDLIKLDIDESQIRHFYDATKGSGYDLLGALGVVLGLRQHPHKYFCSEWCFEAITNKQDGWRFSPNDLYAIKSILTRRH*	phrogs_hmm	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0046	shell	direct	high	449	0.998	GCA_009379265.1_00109
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	100876	101265	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	32115	32504	GCA_009379265_1_1_109	GCA_009379265_1_1_109	+	114260	.	.	hypothetical protein	MSETTLTELSRTEAQVLQSFIAQVDYWKNQHGDKAATIEVIYYPEDDGFEVANGEPNNGVLKRNRTTAFRADLLAWASNQLRQLQGWDNSQTVTAFILSFKDNRYGVRAALASEATDKADDGDDAKNTD*	.	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0047	persistent	direct	high	389	0.997	GCA_009379265.1_00110
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	101349	102014	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	32588	33253	GCA_009379265_1_1_110	GCA_009379265_1_1_110	+	114260	.	PFAM:PF05100.11	minor-tail-protein-	MSFNTDIQQTTVQGFITLYELDARKLGGEIYRFHGHNDGVIRWQGQDFHPIAIKADGLEMRSDGRASTPTLIIHNDIGGIPQALRFLCLKFGDFVGAKLKVIHTLAEYLTSADEQNFKIQNWYIEQKTSQTNVTTTFELSNPVDFEGQKIPVRQITSYCHWAVCGRYRGEECGYIGTNRFTTDGKPTDNPALDRCGGRMTECKLRDNEQRFGGFPAAGLVG*	hallmark_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0048	shell	direct	high	665	0.998	GCA_009379265.1_00111
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	102011	102214	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	33250	33453	GCA_009379265_1_1_111	GCA_009379265_1_1_111	-	114260	.	.	hypothetical protein	MADKASPQARKKATANYFDKSLARIGLVISHTEPHVLDALNQIMAHKDCSKAMAIKIALVEYAKTLD*	.	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0049	shell	direct	high	203	0.995	GCA_009379265.1_00112
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	102597	103379	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	33836	34618	GCA_009379265_1_1_112	GCA_009379265_1_1_112	+	114260	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MRLTKNLQQQIITHAQDVYPNECCGVIIDGQYHPCTNIAPNPANAFEIDTAEWVVLSNRGDIEAIVHSHPNGEPLPSEVDKVQMGLHDIDWVIVGLGHTPTGATYCDIKRHKPTTYQSPLLGREYHHGVQDCYSLVQDYYSRELDITLPSFARSDDWWENPNHEPLYENNFTKAGFIKVQDKNDLQKHDVLLCRVGRTHHVNHALIWLGDDGALTSEKTPDCVGNALILHHPHGGLSVREIYGDNWQRRTAMVVRHQSLG*	mmseqs_cdd	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0050	shell	direct	high	782	0.999	GCA_009379265.1_00114
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	103371	103778	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	34610	35017	GCA_009379265_1_1_113	GCA_009379265_1_1_113	-	114260	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MLYPIAIEKPVSTNECYGVIVPDIVGCFSAGDTVDEAVKNAYEAIVLHLDMLADDGEDIPQATDIAHHQENPDYQGMIWAVVDIDLSAYMGKSEKINVTLPSRLIVKIDEKVKAHKSLYKSRSNYLAQLASRDLA*	mmseqs_cdd	nonviral_gene	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0051	shell	direct	high	407	0.998	GCA_009379265.1_00115
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	103811	103993	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	35050	35232	GCA_009379265_1_1_114	GCA_009379265_1_1_114	-	114260	.	COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family [General function prediction only]. 	MNSRQMIKLITDDGWYEVAVRGSHHHYKHPTKQGKVTIPHPKSDLPIGTVKQILKQAGLK*	mmseqs_cdd	nonviral_gene	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0052	shell	direct	high	182	0.995	GCA_009379265.1_00116
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	104093	104686	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	35332	35925	GCA_009379265_1_1_115	GCA_009379265_1_1_115	+	114260	.	PFAM:PF06805.11	tail-assembly-protein-I	MKTIILHGILAKKFGKSFDLDVKTAKEACHALACQIPAFYEFMMNAEKQGIKFAIFNGEKRTQKTNIGEKQLDDITTASHIHIMPRVIGSGGKTMGWIQVVAGWVLVGVGVVTGNAGLIAAGAGLMLGGVSSLLMPTPNLDPNNEDGNRPNNGFGGAVTTVAQGNPVPILYGEREIGGFIVSAAIYAEDKMVQGVKI*	hallmark_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0053	shell	direct	high	593	0.998	GCA_009379265.1_00117
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	104695	106212	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	35934	37451	GCA_009379265_1_1_116	GCA_009379265_1_1_116	+	114260	.	PFAM:PF13550.5	tail-protein	MKIYGAKRQKQSSNKPYIQKDTASSTNSYQALYGLSEGEIYGLVDGGKSIRLDGTPIINDNGEPNFPDVSWDFRAGSIDQEHIKGFSSVENEQSVNVELRHDRPYTKAINNKQLSAVAIRLGFNSLREQKGNGDVVGYRIEYAIDVQTDGGAWEMVLNTAVDDKVSQGYQRSHRIDLPKAQQGWSVRVRRLTPNRDSEMVSDTMVVSAVTEIIDAKLRYPCTALLALKYDAQTFSNIAKVAVRVRGMLIQVPTNYDPTARTYDGLWDGTFKLAYTNNPAWVFYDICTAKRYGLGDRLAGKVDKWSLYRLAQYCDEMVDDGKGGKEPRFTVNVYLQKADDAYRVLQNLASVFRALSFWDGTSIVVDADTPKEPVYVFSNANVIGGEFSYTGTRARDRHTIVKCAYDDPDNNFETDYIYVQDEHAIAKYGINQLELNLFGCTSKGQAQRAGIWALKSEQLETETVSFSTGLDGFIPKVGEIIHVQDNSRAGRKCVLGRWPLFGWRAF*	hallmark_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0054	shell	direct	high	1517	0.999	GCA_009379265.1_00118
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	106260	106400	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	37499	37639	GCA_009379265_1_1_117	GCA_009379265_1_1_117	-	114260	.	.	hypothetical protein	MAELERIKMEAEKLRAETLKIQKEATWFPWLSLAVALIALIVALVK*	.	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0055	shell	direct	high	140	0.993	GCA_009379265.1_00119
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	106546	107739	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	37785	38978	GCA_009379265_1_1_118	GCA_009379265_1_1_118	-	114260	.	PDB:1Z19_B	Integrase	MLTEVWLKANNGKPRDKVTEIADRDGMSVRISPKGKIVFQLRYRFNGKLKRFDLGVYPLISLKQAREKSLSAKTQLLHGKDPKLEEQIAKQAYINADTFYECFLQWYDKSAVITKKQASDIKRSFELYVFPVIGSLPINDITLQQYIIIIESISEKTPGIAERILTNTKQMLKWAKKREIVTHNILADLELSDFNLVRVKRKRYLSDDEIILFYKALYGSKISYRNRLATELALMFGCRGIELRRAKITDFQDGVWTVPPENHKVGHITQQPLIRPILPPMQALIDEAIAISRSEYLFDRRGEMLEKNAFLDITAGLIHWIDRHCSIQLPRFTFHDLRRTARTNFSAFTSRDIAEIMIGHTVGNMQQVYDHYNYLPQQTAAYEQWLKKLAELKQVAL*	common_virus_hmm	common_virus	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0056	shell	direct	high	1193	0.999	GCA_009379265.1_00120
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	107965	108447	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	39204	39686	GCA_009379265_1_1_119	GCA_009379265_1_1_119	-	114260	.	COG1607	Acyl-CoA hydrolase [Lipid transport and metabolism]. 	MSGFCTLNIASTDLTMTVLMTPDMANFSGNVHGGTILKLLDQVAYACASRYAGGYVVTLSVDQVIFKEPIYVGELVTFLARINHVGTTSMEVGIRVEAENIQTRTARHTNSCYFSMVAVDQAGKPVPVPPLVVDDSLAKQRYEMAKKRKELRIKLQQHDW*	mmseqs_cdd	nonviral_gene	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0057	persistent	direct	high	482	0.998	GCA_009379265.1_00121
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	108470	108790	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	39709	40029	GCA_009379265_1_1_120	GCA_009379265_1_1_120	-	114260	.	pfam04358	DsrC like protein. Family member DsvC has been observed to co-purify with Desulfovibrio vulgaris dissimilatory sulfite reductase, and many members of this family are annotated as the third (gamma) subunit of dissimilatory sulphite reductase. However, this protein appears to be only loosely associated to the sulfite reductase, which suggests that DsrC may not be an integral part of the dissimilatory sulphite reductase. Members of this family are found in organisms such as E. coli and H. influenzae which do not contain dissimilatory sulphite reductases but can synthesize assimilatory sirohaem sulphite and nitrite reductases. It is speculated that DsrC may be involved in the assembly, folding or stabilisation of sirohaem proteins. The strictly conserved cysteine in the C-terminus suggests that DsrC may have a catalytic function in the metabolism of sulphur compounds.	MNHLPSLDDDGHLKNHTDWTPKIAQRLADTIGVTLESEHYQIIGEVRVFFETYHHSPSTRPLIKYLMASLPNLDISNQKLQKLFNTGLVARHVNRIAGLPKPPNCL*	mmseqs_cdd	nonviral_gene	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0058	persistent	direct	high	320	0.997	GCA_009379265.1_00122
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	108806	109111	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	40045	40350	GCA_009379265_1_1_121	GCA_009379265_1_1_121	-	114260	.	.	hypothetical protein	MKFLIHINTDSELISYEAIALALTLATFDHDIQIELGEKVLVLLNNPKSRIYGMIQSLALYDLPKAYHNFQAVNALDKVIQLSLQSGSLALDDYDSKLYFQ*	.	hypothetical_protein	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0059	persistent	direct	high	305	0.997	GCA_009379265.1_00123
GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote	cenote	CDS	109121	109498	GCA_009379265.1	NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265.1_NXDG01000001.1	GCA_009379265.1|NXDG01000001.1	GCA_009379265_1_1	GCA_009379265_1_1@C4	40360	40737	GCA_009379265_1_1_122	GCA_009379265_1_1_122	-	114260	.	TIGR03012	sulfur relay protein TusD/DsrE. The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulfur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulfide moiety, delivered by the cysteine desulfurase IscS to TusA, then to TusBCD. The activated sulfur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulfur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulfur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulfur flux, such as oxidation from sulfide to molecular sulfur to sulfate. [Protein synthesis, tRNA and rRNA base modification]	MILLLVTSSPHSHAGKLAVEYATKQLHLGNQISVFFYGDGAYTANRLMWQTADVPSVAKQWQALSNNHGITLPVCVSTALARGVCDAQNATRHGLIGDNLLPPFSLVGLSELAMMIDDTTSVVQF*	mmseqs_cdd	nonviral_gene	C4	40737	68762	109499	GCA_009379265.1|NXDG01000001.1@region_68763_109499@tool_cenote_CDS_0060	persistent	direct	high	377	0.997	GCA_009379265.1_00124
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	159901	160287	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	1	387	GCA_009379265_1_12_140	GCA_009379265_1_12_140	+	201465	.	.	hypothetical protein	MFGIKLLHSDDFIKSASSSGCFLAIIDKQTNKNHVYNLSTQVQRFELIDIDQVANLANSVQNGAISATVGTLLVRAGVLPALVALSIGAGLPNRTKDAYVCHIEFDNGKSAILQLSKHKYQQFLKHIA*	.	hypothetical_protein	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0001	shell	direct	high	386	0.997	GCA_009379265.1_00830
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	160351	160557	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	451	657	GCA_009379265_1_12_141	GCA_009379265_1_12_141	+	201465	.	.	hypothetical protein	MALAINIVLGANTVHFSRNIQKATQNAKKYLQGFALLAYMQAADKDKSVQDFLIIDPNPMTDEQKSLY*	.	hypothetical_protein	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0002	shell	direct	high	206	0.995	GCA_009379265.1_00831
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	160586	161491	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	686	1591	GCA_009379265_1_12_142	GCA_009379265_1_12_142	-	201465	.	PF14337.6	Domain of unknown function (DUF4393)	MTAETFHLIPAITGAVSGAASVGLLNGPLQTLQDIWFVVYGHKWHYKVESIKAQQAMNIQAMQNNIQTGIEKIPANALKDPNVAIIGPALEASRFHMNEENIREMFANLIVSAMDERKDGQMHHAFVEIIKSLSPLDAKNLKYLNQDSAKNISPIANIIRQESNSYHMLYQHVFLGNPEVSDQDLIAPSIDNLSRLKLIDITYNDYLTDDSEYESFYHSAPYQEMTSALNKEHEALNLDISILQNPDLKIEFEGKILNKDERSEKLDQVMKGLESKIEIQKGIIKLTAFGKNFLSVCSPTT*	hhsuite_tools	nonviral_gene	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0003	shell	direct	high	905	0.999	GCA_009379265.1_00832
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	161543	162193	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	1643	2293	GCA_009379265_1_12_143	GCA_009379265_1_12_143	-	201465	.	PDB:2FJR_A	Repressor-protein-CI	MPSERAKADQFPKMIRRYSKGQAKPRNDKMKLLTQCLGVPITWLDYGEGEMTKNNDKLTPITEWDDSTPLDDDEAEIPFYKDIAFACGYGAVNGDAPLEGRKLRMGRRTLSNLGVMPINAYAVTACDDSMTPYVQDGDTIYIDKGRKEVKDGRIFAIRFGELCLCKRLYRLPDGGVRIVSDNAAEFPEQVATKQQISDGEFEVIGWVWSVSRLERW*	common_virus_hmm	common_virus	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0004	shell	direct	high	650	0.998	GCA_009379265.1_00833
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	162396	162764	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	2496	2864	GCA_009379265_1_12_144	GCA_009379265_1_12_144	+	201465	.	.	hypothetical protein	MNEFIIPNSNSVSNDFNYSRTDLDAQEQQIAEFIKKGGKVINLDNSEQPKKKSAKKRDFNNQRINSKMHLVLCYLKRSGKRMTGLQIQEKFGISATTLGSQTRLLNAQASKQYNQNSNPSRK*	.	hypothetical_protein	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0005	shell	direct	high	368	0.997	GCA_009379265.1_00834
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	163067	164041	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	3167	4141	GCA_009379265_1_12_145	GCA_009379265_1_12_145	+	201465	.	PFAM:PF06152.10	minor-capsid-protein	MKHLINLERFKVHLANKFKTTLNEINEFLQLVVFRHEISELNYKEFELLIGESKQKLLGFLAGYALELTQDWQELYDYSYTLETKMIDDDKPDTLNMNEPQFDADSPIKLSAQVGVTLNQILAKFGDEQSTKISNAISYAYANGLPNQELVRIIRGTRKNRYQDGILAITTRHAKTIAHTGTAIVANQAKQQFIHDNKDIIKGIKILATLDLRTSSICRGLDGVFMPLDKARYPPYHFNCRSSFEIVYDGYQTPKQRASMDGVVKNQSYYEWLKNQPAQYQDEVLGKTRAKLFRDGGMTVERFRALQLDKNFTPLTLDEIKAQL*	hallmark_hmm	common_virus	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0006	shell	direct	high	974	0.999	GCA_009379265.1_00835
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	164112	164864	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	4212	4964	GCA_009379265_1_12_146	GCA_009379265_1_12_146	+	201465	.	PFAM:PF06810.10	minor-structural-protein-	MQLKTDENGYAIVQDGKPIYVHDDGQEIAFDAQATMTKISQLNSEAKNHREEKQKAQSLLKSFDGLDADEARRALELVKNLDDKRLIDAGEVEKVKSEARKALDEQLAQKDAQIKKINDDYRSAVIGGEFARSSFIKDKTLLPPDIAQNAFGRHFDMVDGKVVGYLNGEPIYSRTNMGELANFDEAFETIINHYPSKSDILRGSGASGAGVKQPLAQAGTTNLKRSQMSLEQKSAFIKEHGQTAYLNLGA*	hallmark_hmm	common_virus	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0007	shell	direct	high	752	0.999	GCA_009379265.1_00836
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	164868	165440	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	4968	5540	GCA_009379265_1_12_147	GCA_009379265_1_12_147	+	201465	.	PDB:4AN5_F	Major-Capsid-protein	MAITTNNDVLIYNELAQTAYLERLQENLAVFNKASNNAILLSDENLQGDFTKESFYKIAGEIEHRDVNSTSVVQAKKIAMAERVGVKVPFKFGPYETTEEAFKRRARSVDEFSLLLGQDYADALMAGYWKYATAALQGAVGSNSSMLVTAKLSEHGRKVITQGMRKFGDKFSNLSLLVMDAASYFDIVYR*	hallmark_hmm	common_virus	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0008	shell	direct	high	572	0.998	GCA_009379265.1_00837
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	165421	165801	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	5521	5901	GCA_009379265_1_12_148	GCA_009379265_1_12_148	+	201465	.	PDB:4AN5_F	Major-Capsid-protein	MILYTDKLYQEASTVVYGGAPGTMGIPVLVTDQAKKDTIFGLQQGAIRIRNSQLPAFRVYQDNTKENLVIGVRAEGAFNLNVLGYSYKDTAGANPNLATLGATANWEKYATSDKNTAGVILNIAEG*	hallmark_hmm	common_virus	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0009	shell	direct	high	380	0.997	GCA_009379265.1_00838
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	165803	166054	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	5903	6154	GCA_009379265_1_12_149	GCA_009379265_1_12_149	+	201465	.	.	hypothetical protein	MLVYSKQGKKVLGVDGEYRNPEYFEKTEQTDAVTAIGDYPHIELAYQAIGVNVIRLGVDDTPAVNDDGEQTKAKSRRTPKAVV*	.	hypothetical_protein	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0010	shell	direct	high	251	0.996	GCA_009379265.1_00839
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	166099	166458	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	6199	6558	GCA_009379265_1_12_150	GCA_009379265_1_12_150	+	201465	.	CDD:cd08053	Head-Tail-Connector-Protein	MITLDDLTDIDKADEQTVVIVNAWLNKHKLIPFKTIPEPIKQAGRYIAKAWLDGDLFATRTEGQVISKSSKAGDVSVSKTYADGQMGQAMSQNEQIALALIEPYLQQPLGMFGLPLVRV*	hallmark_hmm	common_virus	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0011	shell	direct	high	359	0.997	GCA_009379265.1_00840
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	166460	166816	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	6560	6916	GCA_009379265_1_12_151	GCA_009379265_1_12_151	+	201465	.	PFAM:PF12206.7	head-closure-Hc1	MGLKAEISTEITQAFDTDLKDAVKDFTGRRVILSDDDWAVNDTQVLSTINYSGRGVFTGFYAHEIDNKTIMQSDVKLICLQDELTEIPQIDDEINEMKIISISHDPAEVSFTIQLRGF*	phrogs_hmm	hypothetical_protein	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0012	persistent	direct	high	356	0.997	GCA_009379265.1_00841
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	166816	167163	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	6916	7263	GCA_009379265_1_12_152	GCA_009379265_1_12_152	+	201465	.	PFAM:PF04883.11	tail-component	MGIKWNKKLSIEPIADKIDATYRKFAIDCYNNVIALSPVRKGRYKNAHHISIGSPSYAETGGGIELVLGLPKHTYPLIYIQNNLPYALRLEHGWSQQAPTGVYGNAFNSAIANLG*	hallmark_hmm	common_virus	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0013	persistent	direct	high	347	0.997	GCA_009379265.1_00842
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	167160	167360	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	7260	7460	GCA_009379265_1_12_153	GCA_009379265_1_12_153	-	201465	.	PFAM:PF16777.4	transcriptional-regulator	MPKITSTPKTQTQIQKESNARRGVKNKAFTLKLDDIELIKSLSKRLNIPQNQLIMDAVRAYQRQLD*	phrogs_hmm	hypothetical_protein	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0014	shell	direct	high	200	0.995	GCA_009379265.1_00843
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	167710	168222	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	7810	8322	GCA_009379265_1_12_154	GCA_009379265_1_12_154	+	201465	.	COG3600	Uncharacterized phage-associated protein  [Mobilome: prophages, transposons]. 	MIKAPYNPIDVANYIVAEAIRREKPVTHLKLQKLLYYVVAKYLQTHNKPLIAENVVKWQYGPVVKSVYHQFKILGSLEITELCEYIESKDDKKLFSVKWANVDANVKTLENDPEFAKVANTVIDDLLSVSAFGLVDITHAEAAWRNFEPEILQGFEPYYSEDELKAATYG*	mmseqs_cdd	nonviral_gene	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0015	shell	direct	high	512	0.998	GCA_009379265.1_00844
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	168339	169133	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	8439	9233	GCA_009379265_1_12_155	GCA_009379265_1_12_155	+	201465	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MTLTEHTKRLIHAHAKICYPAECCGLIIDGQYYPCDNVAVNPTEHFEIDHLDMVEMQEYHGEIQAIVHSHPNGNAEPSEIDRVQMSIHGLDWVICAFGYHADGKEYFDVKRHKPKAYQAPLLGREYHHGVQDCYSLVRDYYSRELDIHLPDFHRRDGWWEDENHEPLYEKNFAKAGFIKMQDKNDLQKHDVILCRVGRTHHVNHALIYVGDGKLKSETTPDCVGNALILHHPHGGLSVREIYGDNWQRRTAMVVRHQALSQTNL*	mmseqs_cdd	common_virus	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0016	shell	direct	high	794	0.999	GCA_009379265.1_00845
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	169113	169526	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	9213	9626	GCA_009379265_1_12_156	GCA_009379265_1_12_156	-	201465	.	COG1598	Predicted nuclease of the RNAse H fold, HicB family [Defense mechanisms]. 	MHYPVTLTPDTDGFCVTFRDIPEAISQGDTTDEALDMAQDALMVAMEFYFEDNRAVPMPSQAQDGEHLVSLPPSVWVKVLLLNEMIAQNVSQAELAKRMGIVPQSLTRIVDLSHTTKIDTLANAFAKLGKQLQVGLT*	mmseqs_cdd	nonviral_gene	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0017	shell	direct	high	413	0.998	GCA_009379265.1_00846
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	169542	169748	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	9642	9848	GCA_009379265_1_12_157	GCA_009379265_1_12_157	+	201465	.	.	hypothetical protein	MVKAITPDEIRAAGEQFKSHPENNAPATADKLIANKSGFVLSERSLKNLQMIIAPLPKQWHRQAVSWA*	.	hypothetical_protein	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0018	.	unmatched_CDS	none	0	0	.
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	169718	169837	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	9818	9937	GCA_009379265_1_12_158	GCA_009379265_1_12_158	+	201465	.	PDB:2MXZ_A	L-alanyl-D-glutamate-peptidase-endolysin	MAQASGKLGVNVRWGGAWMVITGKAGTPQEWVKDYRAGG*	common_virus_hmm	common_virus	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0019	.	unmatched_CDS	none	0	0	.
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	170162	171262	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	10262	11362	GCA_009379265_1_12_159	GCA_009379265_1_12_159	-	201465	.	COG0842	ABC-type multidrug transport system, permease component [Defense mechanisms]. 	MRRFIKQYLTIWLDVIKDRSIFLTMVLSVVFYGFFYPFAYQAQRPADLPIVIVDEEQSPLTQAIIHTTSHTPNIHVLAVVSDFRQAQMLVQSAKADGILLLPDNLSQGIHHGQTGGVGLYLSSAYFLRTQNIGAGLVSSLQATIIQELGQVTQTRHKPMPELIHQSALFNPLSGYGSYIFPAVAPIIVYQTIVLGLAMLVAGYRQRLWRASACDFLAIYAVALTIGCLSCFYLFGFVFWWHDYPRGGNFWGMMLGVPIFVSCAIGVALLIASWVADGAKVGVLLIFSSVPLFMLTGLAYPLMAMPKFLQPLAHALPTTQGVQMFIQLNQMGVPIQDVWQKMAYLASVAVLCLGVAFWRLRLVNKSV*	mmseqs_cdd	nonviral_gene	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0020	persistent	direct	high	1100	0.999	GCA_009379265.1_00847
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	171262	172440	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	11362	12540	GCA_009379265_1_12_160	GCA_009379265_1_12_160	-	201465	.	PF12698.7	ABC-2 family transporter protein	MIVRFIRAFCQAFLRELNRLSCNRFDLAMVMIAPLVIIVLFGAMFYHGKAHHLPVALVDEDNSELSHLIYQHIHHNETIKTVLILDNVQDAHHAINRLDVGGYIHIPKDAQNHLVRGENTGIHIAYNQSFFSIGSAISSALSKSTKGGIAKFIQTKHLTGVLPHLPGNMPHVKISVLFNPNLSYEFFLEPFLVAAVLHLLLCCLVAHAIGQEFHENSVHEWLYHSPFGALFGKISVYVLIISLWHGLWQAWLIGVRGWFVAGSLFVLIIGQLLFYLAYALFGAMVVLKTQNINKSYGILAVYGGSSMSFAGVTLPLNNAPSFTQFWSQIIPFTPFARLQVEQWVIGSPFIITLAQLNSLLIFVLIFAIGSLLLLRRINKTLIAMPNTPKDDS*	hhsuite_tools	hypothetical_protein	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0021	persistent	direct	high	1178	0.999	GCA_009379265.1_00848
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	172468	173631	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	12568	13731	GCA_009379265_1_12_161	GCA_009379265_1_12_161	-	201465	.	COG1566	Multidrug resistance efflux pump [Defense mechanisms]. 	MTDKTDDVKPDTDGNHPKKQKPHTQAKSKPRPLALFLLLALIGSVLLVIIFGLIQSYGTPQNLPTANAIGSTNEPPKGVIAHLRQKITGPATFSIQGRVEGETVNISTKLPSRVAAIYVKEGQAVRAGEPLVQLISPEIDAKKQQAAAMLQSALAFQSSTDRGTRQENVDTLYANWQSAKAQATLAEESYRRGEYLYQEGVISRQRRDEMRAAKQSSAQIAHAAQQQYLKAQRGRTDELKSSADAQVQIARAAVAEADALDAETMLYAPIDGTVSKIYIQSSELVMPAVPVMSLLDNHPTITISIQENQYSHVHALPKLTGFIPALNKTADFKIVHTDDEGEFATIKNTRQTGGYDIHSFKTKLEPITPIEGLKVGMSVIFDITVLP*	mmseqs_cdd	nonviral_gene	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0022	persistent	direct	high	1163	0.999	GCA_009379265.1_00849
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	173678	175174	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	13778	15274	GCA_009379265_1_12_162	GCA_009379265_1_12_162	-	201465	.	5AZS_A	Outer membrane protein OprJ	MSIKCQLVAIDNIIKPCYDKILNFVYFSTMKMPYFLLLGLLLVQQADADYSLLDAQKQLMSSSPAIQASHALYQADVLQAESLQKLHYPRISLNAHAFVLQQNSSIPLDHIKEQTAQHINTHFDHRFGSAPDGLLDALHNSTQTALDRLPDHQDVKLRHDGITPNITATIPIYTGGLISSTKNIANLQAQRGKFGLQERISLAKLNLIRHYFNVQLQKQLTDTQQNMLSAMQLHVDNAYKLEQQGFISRGQRMQFEVARNQVQRLYQSTQNQHQNSIYELAVLLGLPHIEPLSTPLFINTQHRPNWQALLKDSQNTPLNQKLKTDILLADENIALRQSTKKPKIAAVARYTLDDKPDWFAGVAVSYNLFLGIDRDKQIGAAHLQKQAAQLGHEQVNEHITTTMHTAYGEMVLAQKTHALLQQNRQAAKENLRIQTLSFQEGFGTVAGVVDAQSALSQIDSETALNAYRYLLALATLLHYTGTIDDFDDYLSLDDAHKL*	hhsuite_tools	hypothetical_protein	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0023	persistent	direct	high	1496	0.999	GCA_009379265.1_00850
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	175436	179608	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	15536	19708	GCA_009379265_1_12_163	GCA_009379265_1_12_163	-	201465	.	PDB:5XDR_A	Replicative-polyprotein	MHSTDNLPVLAKDRHYLNKLKQKMNSTTGDLKTKCKIRYDAIYERSAEQVANRMDSIPKNLSEKLNHDLPVTAEADTLIQAIRDHQVVIIAGETGSGKTTQLPKLAMMAGRGITGQIGHTQPRRLAARSVAMRIAEELGEPLGQTVSFKIRFTEEGGKHSIVKLMTDGILLAELGSDKFLANYDTIIIDEAHERSLNIDFIMGYLKRLLPKRPDLKVIITSATLDTQRFSDYFAANGKPAPVYIVEGRSYPVEVRYHPLTDTIVSSQDDDAFDDIEDNLPRALTAAVNECFEDARTKGHPDQADILIFAATEAEIRELQEVLMLYAPAHTEILPLFARQSYGEQQKIFAPSGKGRRIIIATNVAETALTVPNIRYVIDLGFARISRYNYRSRIQRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFNSRPEFTEPEILRTNLASVILQMERLQLGDVNAFDFITPPDLRLVNDGRKLLIELGALDDKSFTKTRAKKGRTQLSSLTKIGQQMAKMPIDPRLARMLVAGDAFDCLADILIIVSALAVQDVRERPINKHAQADQKHALFRKEDSDFLFYLELFAALFDRHSTNDNQALSSNARRNFAKKHYLSYARIREWQKTHRQLSEMMAEMGFEINKQKNHQNDVKIDTKKGVRLSLKSGTSHQKSIKQALVGAKALKNDIDNKTSIHYANIHRALLSALLSFVAHKTDTVGEYLMARSQKARIFPASTLHKKGAQWVMAFEVVETSQVYMRTLAKIEPEWIIKAAPNLLKYHYFEPHWSKKAGRVRAYAQISLFGLIVIAKELVNFEQIDLVQAREIFIRDALVANQYGMQMKFLADNANKIKDIERIEDKLRRRDLLVDEESLYQFYDAKIPNHIASRKSFEEFYHDAENKTPNFLHFSDEDVLNEAVDDSREFPESWHLGGVRLPLSYVFDPAADNDGVTVHVPIKALAQVDPVTLLWGISGWRYELVLQLLKTLPKEIRRQIVPIPDTCQKIFHQLDASSKMGLLDQLVAALKTLGVQAHAQDFAPDKVEDYLRPLICVVDDKNRVIEKSRDLPKLQARHRKTSVQSIAIEQGVHHHFPNHFNFVKNKHTSGIVMQEFSALKADAAQSAVFIATFTEMNAALAEHKKGVLTLIKGHLGAKQKQLTGQIDKAFKLAFAPLGDLEKLKNIVVHATLEACLYDYGPDFDHKPVSQHVDHARAAIAGLITQNNQWLISHLPLDEREFDDCQDLILKNFLLVGQEILRNLKEIYTAWQTARGKLLMLDQEIFGENIEDIEDQLDDLQLANFVYQTDYRHWRQYPRYLQALNIRLDRLQHNLEADLDAVYLLDTHMERLARCVKNPKFAEYRWLVEEYRINLFAQPMKTAQPVSAKRLETLWANLTTQ*	common_virus_hmm	common_virus	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0024	persistent	direct	high	4172	1.0	GCA_009379265.1_00851
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	179885	180574	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	19985	20674	GCA_009379265_1_12_164	GCA_009379265_1_12_164	+	201465	.	TIGR02796	TolQ protein. TolQ is one of the essential components of the Tol-Pal system. Together with TolR, it harnesses protonmotive force to energize TolA, which spans the periplasm to reach the complex of TolB and Pal at the outer member. The tol-pal system proves to be important for maintaining outer membrane integrity. Gene pairs similar to the TolQ and TolR gene pair often number several per genome, but this model describes specificially TolQ per se, as found in tol-pal operons. A close homolog, excluded from this model, is ExbB of the ExbB/ExbD/TonB protein complex, which powers transport of siderophores and vitamin B12 across the bacterial outer membrane. The Tol-Pal system is exploited by colicin and filamentous phage DNA to enter the cell. It is also implicated in pathogenesis in several bacterial species [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MNESISLISLVIEASVVVKLVMAILLLLSTISWVLIFHLGTKIGGIAKFDKRFERWFWTDDIDHQLSVVQAESERAGLELIFYTGFYDQNHQDQDSSLSDDKKVQIVERRLRMALGSEQVHLEKGLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQAESVGLATVAPSIAEALIATALGLFAAIPATMAYNHFATKSNTLYENRSLFCEGLISALVTNLAKKNTASTL*	mmseqs_cdd	nonviral_gene	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0025	persistent	direct	high	689	0.999	GCA_009379265.1_00852
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	180600	181034	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	20700	21134	GCA_009379265_1_12_165	GCA_009379265_1_12_165	+	201465	.	TIGR02801	TolR protein. The model describes the inner membrane protein TolR, part of the TolR/TolQ complex that transduces energy from the proton-motive force, through TolA, to an outer membrane complex made up of TolB and Pal (peptidoglycan-associated lipoprotein). The complex is required to maintain outer membrane integrity, and defects may cause a defect in the import of some organic compounds in addition to the resulting morphologic. While several gene pairs homologous to talR and tolQ may be found in a single genome, but the scope of this model is set to favor finding only bone fide TolR, supported by operon structure as well as by score. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MVTSNRFARRQRPLNSDMNVVPYIDVMLVLLVIFIVTAPMLATGIEVSLPKEQTKPITQADKLPVIVSIQADGNLYVSHKNAIDVPITPDKLDTLLRQMHQDNTDLQVMVNADADNAYSRIMQIMALIQNVGITQVSLLSESVQ*	mmseqs_cdd	nonviral_gene	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0026	persistent	direct	high	434	0.998	GCA_009379265.1_00853
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	181065	181865	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	21165	21965	GCA_009379265_1_12_166	GCA_009379265_1_12_166	+	201465	.	4G7X_B	Putative uncharacterized protein, TolA protein	MRLSDNHPTVNFDKSALILPILASVLLHTVIIIAVAAPLITPPTKPNTTIQTALVGQEAFNRAKTALSNHHANQNKPTATNTSSTITANDNDNAFMQAQNQHRYHPQVSTSATTTQAYHPPPNSAPFESNSPNIQNQPTNAHAKLAEYSNHVSDLEQSNHTESTPSRAQINAAITSVKHRIEAIWQRYPKQPNQTITFQVNMNQQGDVTSIQFGGGHPDLRESVEAAVYAAAPFYELGGMRDSIRLQFTTEQLIMDNNQTTNEPNH*	hhsuite_tools	hypothetical_protein	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0027	persistent	direct	high	800	0.999	GCA_009379265.1_00854
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	181882	183144	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	21982	23244	GCA_009379265_1_12_167	GCA_009379265_1_12_167	+	201465	.	TIGR02800	tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MKSPITKVCLALTISFSAALTHTYADDELIVISEQVAPSQYPVAVMPFSEAHQMSHYLSLAGLGTTHQNLPQHTQTNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEIIDTANGLVSVKHTQISDNHPASIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNKISSLKLIDPSGQLIRTLDTVNGSIITPTFSPDGLSIAYSVQTKNNLPIIYIVSVSGGTPKLVTPFWGHNLAPSFSPDGSSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPNYLADASGFIYTADKGTRRQSLYRYDFGTTHSTQIASYATNPRLSPDGSKLVYLSGGQIIIANTKGRIQQSFRVLGTDVSASFSPSGTRIIYTSNQGNKNQLMIRSLSSNAIRTIPTSGTVRDPIWSK*	mmseqs_cdd	nonviral_gene	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0028	persistent	direct	high	1262	0.999	GCA_009379265.1_00855
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	183410	186964	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	23510	27064	GCA_009379265_1_12_168	GCA_009379265_1_12_168	-	201465	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MIDTFKPKLDLPTKANFKTTLPLLGGADLSFWLALAAKSEERLIVMIANHQNELNQLDTELSFFGIDAHVFPDWEILAYDQLSVHQDIISERIALLTRMPTTGVLLVSTQTLMQRIAPPSWLIGQHFDLAVGDKFDIHEQRLRLTKAGYVQTENVFEPGEFAVRGSIVDIFAVGQSLPFRLDLFDDNIETIKFFDPDSQRTLSDNDLAQLKKDAQAGMNTHHAQKLPSSAKITEFRLLPAREFPLEAGKEMFRQNFASLFPNASARKIEFYNDVMAAIAPQGIEFYAPLFFELDAWMKTGNLFSYLPDDTLVVSHDNLSACHDEYYQQIQARHHSRAHDKSLPIMPPDYLFLANNEFHQVLKAYPRVVINTNNDTAKIGAMESLPPPILPINHQAAKPLSELLSFIKSGQVPILLVAESAGRREIILELLKDKVAVKVVDNYQEFINNLDDFKTDCIALSVAPIERGLWLRDETGGLCIISETQIFGRQVLQTRRRRQSSVSQAFLIKSVTELTEGALVVHLEHGIGRYQGLVVLDVGEGEQEFIHLKYADDASIYVPITNLALIGRYSGSDLQTVSLSKIGSGKWEKAKLKALEQIHDVAAELLNVQARRNAKSGISFDIDMSQYELFASQFAFEETIDQAEAIHAVMHDMKQSKPMDRLICGDVGFGKTEVAMRAAFIAVQAGYQVAVLVPTTLLAGQHEDSFLNRFADWPIKIESLSRFGNKKHQDAILAGLADGTVDIVIGTHKLIQDDVKFKQLGLMIIDEEHRFGVRHKERIKALQTNIDSLSMTATPIPRTLNMALSGMQDISIIATPPARRLAIKTFLLPKSDETIKEAILREILRGGQVYYLHNDVASIEAAADTLRELVGEARVAVAHGQMNERELSVVMNDFYHKKFNVLVASTIIETGIDVPNANTIIIHRADKFGIAQLHQLRGRVGRSHHQAYCYLMVPSLKGLSSDAKKRLNAITRANTLGAGFMLASEDLEIRGAGEILGKEQSGNMQTIGFGLYMDMLERATNAIKQGKTPSLATPLDLVSDIDIHASALIPDEYLGDVHERLVFYKRISSLDDVNQLIDIRTEMIDRFGTLPTQTQNLFAVHRIRIRAKALGITKIDATQTTISIEFRADTPIDGLAIIKLIQSNDGYRMNGATAIRYTSQELMDTQARIDKVNELLLYFESTKTA*	common_virus_hmm	common_virus	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0029	persistent	direct	high	3554	1.0	GCA_009379265.1_00856
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	186969	187631	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	27069	27731	GCA_009379265_1_12_169	GCA_009379265_1_12_169	-	201465	.	PRK00043	thiamine phosphate synthase. 	MTLQSIDKVPKLYLLTNDDELTTLLDKLERVFDTGAVSLLQVRRKSTLKLYDLATVYREAEMIVSLANDYDIKVVMNDSLELASHFGTGLHLGQRDGSVRVAREILGDHVVIGRTCHTDLALFKEAKREGATYGAMGTAFASITKPRAKIISKDILKKACELDFPLCVIGGITLENIHQLRDKLNGAAIDYIAVTADIMGHSVDTIADKCLAWQQKLNTW*	mmseqs_cdd	nonviral_gene	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0030	persistent	direct	high	662	0.998	GCA_009379265.1_00857
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	187785	188222	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	27885	28322	GCA_009379265_1_12_170	GCA_009379265_1_12_170	-	201465	.	6AF2_A	HIT domain-containing protein	MFQLHPTLAKDTFLVGDFPLSTVRLMNDCQFPWLILVPRVSGIKEIYELSAADQVQFLRESSWVSSQMAKIFGADKMNVAALGNQVSQLHFHHIVRYQNDAAWPNPVWGHEAMPYTQEVLSHMQQTLMMALRGHHQMPFDWKMDV*	hhsuite_tools	hypothetical_protein	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0031	persistent	direct	high	437	0.998	GCA_009379265.1_00858
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	188798	188995	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	28898	29095	GCA_009379265_1_12_171	GCA_009379265_1_12_171	+	201465	.	PFAM:PF16777.4	transcriptional-regulator	MPKIVANPKTRAQIQKDSDARRGVKPIGFKVPIEFAELLDELAKQSGKTKNIIIMEAVELWAKQL*	phrogs_hmm	hypothetical_protein	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0032	persistent	direct	high	197	0.995	GCA_009379265.1_00859
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	189321	189611	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	29421	29711	GCA_009379265_1_12_172	GCA_009379265_1_12_172	+	201465	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MALECLDVHFSGLVADGEEIPLPTNFDAHTQNSQFDGMMWAWVDMDLSKYDIKSHKINITLPNHLIAKIDEKVSAHKSLYKSRSNYLAQLAMADLA*	mmseqs_cdd	nonviral_gene	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0033	shell	direct	high	290	0.997	GCA_009379265.1_00860
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	190016	190231	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	30116	30331	GCA_009379265_1_12_173	GCA_009379265_1_12_173	+	201465	.	.	hypothetical protein	MTDSTTSPARQKATNTYRQKALANIALVISHTEPHALDALNQIMAHKDCSKAMAIKVALVEYANTLSQTSR*	.	hypothetical_protein	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0034	shell	direct	high	215	0.995	GCA_009379265.1_00861
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	190347	190892	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	30447	30992	GCA_009379265_1_12_174	GCA_009379265_1_12_174	-	201465	.	COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ribosomal structure and biogenesis]. 	MSQFSDALIHIVLFSPKIPNNTGSIIRLCANTGAQLHLVKPLGFELDDTRLKRAGLDYHEYATLSVHDNWQETKSALKSLGVERIVAMTTKFSRPFYEYQFKLDNDQHKVALVFGSETDGLPEEVRADIGANHWLRLPMLPDSRSLNLANSVGICLYEVWRQLGFVGDIGQSVGYHKPTSR*	mmseqs_cdd	nonviral_gene	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0035	persistent	direct	high	545	0.998	GCA_009379265.1_00862
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	191140	191280	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	31240	31380	GCA_009379265_1_12_175	GCA_009379265_1_12_175	+	201465	.	COG5510	Predicted small secreted protein  [Function unknown]. 	MKKVLVASIAAVVVLTGCNAIKGFGKDVSKAGEAVSDTAQKVEKKI*	mmseqs_cdd	nonviral_gene	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0036	persistent	direct	high	140	0.993	GCA_009379265.1_00863
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	191362	192537	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	31462	32637	GCA_009379265_1_12_176	GCA_009379265_1_12_176	-	201465	.	COG0635	Coproporphyrinogen III oxidase or related Fe-S oxidoreductase [Coenzyme transport and metabolism]. 	MYPDLLDPAHIPLSLYIHIPWCVKKCPYCDFNSHALPSQVPFENYIEALLSDAVSQQSLVSNRQIDTVFIGGGTPSLLPIESFKRLFDGLRLIYDFAPTCEITLEANPGTLEHSPFDEYLTIGINRLSIGVQSFDHNALTVLGRIHNPDQASNAIRAARIAGFDRVNADLMYGLPNQNPSKAVNDIQTAIDAGATHLSWYQLTIEPNTTFYCTPPQLPDEEIMAEIETLGQSVLTKHGFYNYEVSAWHGPNDAPCQHNLNYWQFGDYLAIGAGAHGKLTLKNHPDYQDGIYRYQKSRQPKDYLAFEDAPKMVNFERISDDNLPFEFMMNALRLKDGVSTDVFETRTGLLISTIDNEMLPLQHQGLMVLDPLRIAPTRLGFRYVNYLVSQFI*	mmseqs_cdd	nonviral_gene	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0037	persistent	direct	high	1175	0.999	GCA_009379265.1_00864
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	192551	193726	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	32651	33826	GCA_009379265_1_12_177	GCA_009379265_1_12_177	-	201465	.	PDB:1OYW_A	ATP-dependent-DNA-helicase	MTETTVKNFDDLPLSEPILKAVQALKFDQLTPIQAQILPHTLANQDAIGQAQTGTGKTATFLITIIESLLKRPFQADEIRYLGEPRALVLAPTRELAQQILADCRELTRFSQLYNLCITGGSDFDKQLEQLHKRPLDILIGTPGRIIDWVNKGELFLDRVEVFVLDEADRMLDMGFIPDIKRIVRHMPSNTERQSLLFSATFNQDVMNLAYRWLHQPAFVEIAPESKTNQAIDQQFYLVTEREKTSALKQILADDSVKKTIIFANRKDQVKRLYDYLRRHHKVTMLSGDVAQQKRERYLQRFKDGEVNVLVATDVAGRGIHVDDVTHVINYTLPDMPDDYVHRIGRTGRAGLSGVSISFVSENDAFNLPALERHIDQKFKLNQFEFLDEHK*	common_virus_hmm	common_virus	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0038	persistent	direct	high	1175	0.999	GCA_009379265.1_00865
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	193757	194197	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	33857	34297	GCA_009379265_1_12_178	GCA_009379265_1_12_178	-	201465	.	.	hypothetical protein	MMMKNKWMRGLAILVLSLPTVTYAKTAAPKASEAPEVSLTQEEQMAIDFCDFSAYGVMHIAGDHQGGATKSEALTNHDKRMAELKDLIDLDPETATMLDKYWKGAIDRIFQESVQKTDAEKQAFVMGVGESSFYSCLDQVLKTPKN*	.	hypothetical_protein	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0039	persistent	direct	high	440	0.998	GCA_009379265.1_00866
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	194547	195425	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	34647	35525	GCA_009379265_1_12_179	GCA_009379265_1_12_179	+	201465	.	TIGR02139	sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]	MLNQPIPLKNRARRVMPFFGLSMGISIFALGLLVILPFLMMILTTLQMSFDDIMQTIREPQVFAAIKLSLSMAMLATLTNLIFGTLAAWVLVRYEFWGKSFLNALVDLPFALPTAVTGIALATLYAPNGLFGQWFTHLGILLFNEPIKIAFTPIGIWLALVVVSFPFIVRAVQPVLAELSVEFEEAAAVMGAGRLTTFCRVILPEISPAMLIGAGMMFARATGEYGSVIFIAGNIPMQSEILPLIIVSKLEQFDVAGAACVSLFMLLISLVFLFTMNFIQWKLSARLGAKTN*	mmseqs_cdd	nonviral_gene	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0040	persistent	direct	high	878	0.999	GCA_009379265.1_00867
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	195470	196309	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	35570	36409	GCA_009379265_1_12_180	GCA_009379265_1_12_180	+	201465	.	COG4208	ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]. 	MSHTSSYSYQKNPATRDKPWVRWSLIGIAVVFMGVMLVVPLVSVFYEALKEGWQAYQAALLEPDALASIKLTLITAAIILPINTIIGVALAYLITRHQFRGKFVITTLLDLPFAVSPVVAGLMFVLVFGANTRLGGYLESMGIQVIFATTGIVLATLFVTFAFIARELIPLMQAQGDSEEQAALTLGANGWQMFWKVTLPNIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTVPLMIEIAYNEYAFTLAFALSSLLALLALITLVAQGLMSHKK*	mmseqs_cdd	nonviral_gene	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0041	persistent	direct	high	839	0.999	GCA_009379265.1_00868
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	196402	197121	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	36502	37221	GCA_009379265_1_12_181	GCA_009379265_1_12_181	+	201465	.	COG1118	ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]. 	MSIKIQNIHKTFGDFVALGEISIDISTGELTTLLGPSGCGKTTLLRIIAGLENADNGRIYFDSIDVTDIPVQHRGIGFVFQQYALFRHQTVAQNIAFGLTLLPRNTRPSANTIDRRVDELLDLVQLSHTKTRYPHELSGGQRQRVALARALATEPKLLLLDEPFGALDAKVRKSLRDSLKDIQREIGITSILVTHDQEEAQAISDKIVIMNHGQIEQIGTPSKLFAQPSSDFVVDFLGL*	mmseqs_cdd	nonviral_gene	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0042	persistent	direct	high	719	0.999	GCA_009379265.1_00869
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	197163	198581	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	37263	38681	GCA_009379265_1_12_182	GCA_009379265_1_12_182	-	201465	.	PDB:3BH0_A	Helicase-ATPase	MAKAKSSYICQNCGAIYGKWAGQCTDCGEWNTLVEAPNTSLPHHHKSKTTTAPRKTANYAGAVSAVMTLDHVGVTLETRMPTGIGEFDRVLGGGLVAGSVVLIGGDPGIGKSTILLQTAINMAAGDSLSGSALYITGEESLSQVAMRAVRLGLPTDRLRVLAETNVDTICAALTTEQPAIAVIDSIQTLFTEAIQSAPGGVAQIRESAAVLTRYAKQTGTALFLVGHVTKEGALAGPRVLEHMVDTVLYFEGESDSRFRMIRAIKNRFGAVNELGIFGMTDTGLKEVANPSAIFLSRYDKPIAGSVVMVSREGTRPLLVEVQALVDDSQGQPRRMALGLDYQRLSMLLAVMHRHGGIHTSGMDVYVNVVGGVKVMETGSDLAVLIACASSIKEKPLPVRLCVFGEVGLSGEIRPVPNGQERLKEAMKHGFTHAIVPRANAPAANHPQFKNIQIIAVDRLDEAIYQAFEINAG*	rep_hall_hmm	common_virus	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0043	persistent	direct	high	1418	0.999	GCA_009379265.1_00870
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	198879	200711	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	38979	40811	GCA_009379265_1_12_183	GCA_009379265_1_12_183	+	201465	.	COG1274	Phosphoenolpyruvate carboxykinase, GTP-dependent [Energy production and conversion]. 	MTAKITAPDFVRHQALIHWVAEIAALTKPAAIEWCDGSEEENQRLIDLMIKNGTMIKLDEDKHPNSYLAFSDPTDVARVEDRTYICSKEEIDAGATNNWVEPSQMRTKLNDLFDGCMAGRTMYVVPFSMGPLGSHIAHIGIEITDSPYVVVSMRKMARMGKEVYDVLGADGEYVPCVHTVGSPLTEGQKDVAWPCNDDKYIVHFPETREIWSYGSGYGGNALLGKKCLALRIASAMGREQGWLAEHMLILGVTNPQGKKHYIAAAFPSACGKTNFAMLIPPAGYEGWKVETVGDDIAWIKPSEDGKLYAINPEAGFFGVAPGTNTKTNSNCMSTLGSDVIYTNVAVTDDGEVWWEGKTKETPANLTNWKREPHTGAERAAHANARFTVSAKQCPSIDPQWENPEGVPISAFIFGGRRADTVPLVSEAFDWVDGVYKAATMGSETTAAATGQQGVVRRDPFAMLPFTGYNMADYFNHWLQMGENLGKKAKAAGNQLPKMFKVNWFRRDTNGDFVWPGFGQNMRVLQWIIERCEGTANAVRTPIGLVPTYDDINWDQSDFTKAQFELVTSQDKDAWIKELESHAELFDKLGERMPTALKAHNAKLKADIEQA*	mmseqs_cdd	nonviral_gene	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0044	persistent	direct	high	1832	0.999	GCA_009379265.1_00871
GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote	cenote	CDS	200869	201462	GCA_009379265.1	NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265.1_NXDG01000002.1	GCA_009379265.1|NXDG01000002.1	GCA_009379265_1_12	GCA_009379265_1_12@C13	40969	41562	GCA_009379265_1_12_184	GCA_009379265_1_12_184	-	201465	.	PDB:5EMI_A	Cell-wall-hydrolase-autolysin	RQPVSAQQTSQATQSTKNNQSTATHRVQSGESLTAIARRYNISLHALAKENGLSVTDGVLIGQTLKLPSDAKAESSTPSRLGNTKNNSTRTPANTNIGITENYTVRSGDSLTMLSNRFGVAIGDLATANGLASNANLRIGQTLKVPKLTTTYTVKAGDGLIALARRYGISTQELAKMNNLEPTADLRIGQVLTVPNK*	common_virus_hmm	common_virus	C13	41565	159901	201466	GCA_009379265.1|NXDG01000002.1@region_159902_201466@tool_cenote_CDS_0045	persistent	direct	moderate	396	0.667	GCA_009379265.1_00872