core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	159797	160183	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	1	387	GCA_009379305_1_12_139	GCA_009379305_1_12_139	+	173461	.	.	hypothetical protein	MFGIKLLHSDDFIKSASSSGCFLAIMDKQTNKNHVYNLSTQVQRFELIDIDQVANLANSVQNGAISATVGTLLVRAGVLPALVALSIGAGLPNRTKDAYVCHIEFDDSKSAILQLSKHKYQQFLKHIA*	.	hypothetical_protein	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0001	shell	direct	high	386	0.997	GCA_009379305.1_00955
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	160246	160464	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	450	668	GCA_009379305_1_12_140	GCA_009379305_1_12_140	+	173461	.	.	hypothetical protein	MALAINIVLGANTVHFSRNIQKATQNAKKYLQGFALLAYMQAADKDKSVQDFLIIDPNPMTDEQKKPLLSAL*	.	hypothetical_protein	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0002	shell	direct	high	218	0.995	GCA_009379305.1_00956
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	160482	161378	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	686	1582	GCA_009379305_1_12_141	GCA_009379305_1_12_141	-	173461	.	PF14337.6	Domain of unknown function (DUF4393)	MTAETFHLIPAITGAVSGAASVGLLNGPLQTLQDIWFVVYGHKWHYKVESIKAQQAMNIQAMQNNIQTGIEKIPANALKDPNVAIIGPALEASRFHMNEENIREMFANLIVSAMDERKDGQVHHAFVEIIKSLSPLDAKNLEYLSQSGDAPIVNIVKEASYGFHMLHQHVFLGNRQVLDPNLITPSIDNLARLKLIDVTYTEHLTHEPVYDPFYHSALYQEKVSALGKELKLRRLDISKLQDLTRPVELDGKVLNKDERTEQIELINKELESKIEIQKGIIKLTAFGKNFLSVCSPTT*	hhsuite_tools	nonviral_gene	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0003	shell	direct	high	896	0.999	GCA_009379305.1_00957
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	161430	162080	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	1634	2284	GCA_009379305_1_12_142	GCA_009379305_1_12_142	-	173461	.	PDB:2FJR_A	Repressor-protein-CI	MPSERAKADQFPKMIRRYSKGQAKPRNDKMKLLTQCLGVPITWLDYGEGEMTKNNDKLAPITEWDDSTPLDDDEAEIPFYKDIAFACGHGAVNDEVTHETRKLRMGKRTLSNLGVMSENAFAVTARDDSMMPYVQDGDTIYIDKGRKEIKDGRIFAIRFGELCLCKRLYRLPDGGVRIVSDNAAEFPEQVATKQQISDGEFEVIGWVWSVSRLERW*	common_virus_hmm	common_virus	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0004	shell	direct	high	650	0.998	GCA_009379305.1_00958
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	162283	162651	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	2487	2855	GCA_009379305_1_12_143	GCA_009379305_1_12_143	+	173461	.	.	hypothetical protein	MNEFIIPNSNSVSNDFNYSRTDLDAQEQQIAEFIKKGGKVINLDNSEQPKKKSAKKRDFNNQRINSKMHLVLCYLKRSGKRMTGLQIQEKFGISATTLGSQTRLLNAQASKQYNQNSNPSRK*	.	hypothetical_protein	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0005	shell	direct	high	368	0.997	GCA_009379305.1_00959
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	162954	163946	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	3158	4150	GCA_009379305_1_12_144	GCA_009379305_1_12_144	+	173461	.	PFAM:PF06152.10	minor-capsid-protein	MKHLINLERFKVHLANKFKTTLNEIDEFLQLVVFRHEISELNYKEFELLIGESKQKLLGFLAGYALELTQDWQELYDYSYTLETKMIDDDKPDTLNMNEPQFDADSPIKLSAQVGVTLNQILAKFGDEQSTKISNAISYAYANGLPNQELVRIIRGTRKNRYQDGILQITTRHAKTIARTGTAIISSEAQKEFVAQYSDIIQGVQVLATLDTRTSPICRYLDHTIMPIDKAKYPPYHHNCRSTTILVYKGMTAPTKRASENGVTDNVSYYEWLKKQALETQEMALGKARAKLFGEIGIERFKALQLDKNFEPLTLDEMRQLEPKIFEKVF*	hallmark_hmm	common_virus	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0006	cloud	direct	high	992	0.999	GCA_009379305.1_00960
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	164022	164756	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	4226	4960	GCA_009379305_1_12_145	GCA_009379305_1_12_145	+	173461	.	PFAM:PF06810.10	minor-structural-protein-	MKLKLDENGNVVVQDGKPVYMYDDGQEIAFDAMQNMAKISQLNAEAKQHREAKEKAETLLKAFDGLNADDAKKALETVKNLDDKRLIDAGEVEKVKAEAKKAFDEQLAEKDAQINKIKQEYNNAVIGGAFARSSFIKDKTLLPSDIVQSSFGSHFTMENGKIVANLGGNPIYSRKNPGELADFDEALEIIISQYPHKDSILRGSSASGAGATQAGVGKNTPKSLADCKTDEERVAWLNEQNNGE*	hallmark_hmm	common_virus	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0007	shell	direct	high	734	0.999	GCA_009379305.1_00961
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	164759	165712	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	4963	5916	GCA_009379305_1_12_146	GCA_009379305_1_12_146	+	173461	.	PDB:4AN5_F	Major-Capsid-protein	MAFDLVKFNQETHLVMTETIAQQVDKFNAQSNSTIQLIAKPFKGDFDVASSFKAIANLVRHRDVENGQNNISSARLTQHKNVAVKIAAGTPEILWEAAQYNWTMQNPQLAAIKIGEQLGRATIADMLNTAIKCGVSAIKGNTALVEGDGTTALDFASLTKGASRFGDRSQAIGAWVMHSGALTNLQLKALGNNERLFTYENVSVLRDPQGRLFIVTDCPDLVDESTKHNILGLTEGGLIVHNQNDFNSVIVPKTGTENITNAYQAEWSYGASVKGYTWDMTAGGANPNAGALATPTNWKKTASSDKDTAGVLVVAKA*	hallmark_hmm	common_virus	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0008	shell	direct	high	953	0.999	GCA_009379305.1_00962
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	165722	165964	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	5926	6168	GCA_009379305_1_12_147	GCA_009379305_1_12_147	+	173461	.	PFAM:PF10281.8	Arc-like-repressor	MERILYFTDDFSQENQAYAKQHGLIIRNAKAYGAVDYLEQCDKVCGQVPIAYEHLPRFELDDNVSDDDTKPKRTRKPKEE*	phrogs_hmm	hypothetical_protein	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0009	shell	direct	high	242	0.996	GCA_009379305.1_00963
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	166021	166371	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	6225	6575	GCA_009379305_1_12_148	GCA_009379305_1_12_148	+	173461	.	CDD:cd08053	Head-Tail-Connector-Protein	MLDDLPIDTSDKERVLMVVNAYLINKGVKFVGDVPEPIKQAGLELAHAFMNGELLAGRTEGVVTSKSSKAGDVSVSKTYADGADGQAMGQHEMIALALMQPYIKKSYGVNALVGRL*	hallmark_hmm	common_virus	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0010	shell	direct	high	350	0.997	GCA_009379305.1_00964
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	166368	166727	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	6572	6931	GCA_009379305_1_12_149	GCA_009379305_1_12_149	+	173461	.	PFAM:PF12206.7	head-closure-Hc1	MRQEITADIANAFNTDLADTVKDFTAKRVILSDDDWAVNDTQVLSTINYSGRGVFTGFYAHEIDNQTIMQSDVKLICLQDELTDRPQMNDSINQMKVMNISQDPAGICYFIQLRGTNGD*	phrogs_hmm	hypothetical_protein	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0011	persistent	direct	high	359	0.997	GCA_009379305.1_00965
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	166717	167064	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	6921	7268	GCA_009379305_1_12_150	GCA_009379305_1_12_150	+	173461	.	PFAM:PF04883.11	tail-component	MGIKWHKKITVEPIADKIDATYRKFAIDCYNNVIALSPVRKGRYKNAHHISIGSPSYAETGGGIELVLGIPKHTYPLIYIQNNLPYALRLEHGWSQQAPTGVYGNAFNSAIANLG*	hallmark_hmm	common_virus	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0012	persistent	direct	high	347	0.997	GCA_009379305.1_00966
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	167061	167261	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	7265	7465	GCA_009379305_1_12_151	GCA_009379305_1_12_151	-	173461	.	PFAM:PF16777.4	transcriptional-regulator	MPKITSTPKTQTQIQKDSNARRGVKNKAFTLKLDDIELIKSLSKRLNIPQNQLIMDAVRAYQRQLD*	phrogs_hmm	hypothetical_protein	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0013	shell	direct	high	200	0.995	GCA_009379305.1_00967
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	167642	168025	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	7846	8229	GCA_009379305_1_12_152	GCA_009379305_1_12_152	+	173461	.	PDB:2L25_A	tail-completion-protein	MNSFHIEQTILGHIKAWEHFDDVPLAKENRNFKPPDGIWGRVTILGGVNQVRSISNTPNILQQGTLVIQLFCPQDLGTVAIKQKADSLANHLQTRRFGRLELLAPSIINAGFHDYYQINVSVAWRYY*	hallmark_hmm	common_virus	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0014	shell	direct	high	383	0.997	GCA_009379305.1_00968
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	168025	168213	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	8229	8417	GCA_009379305_1_12_153	GCA_009379305_1_12_153	+	173461	.	.	hypothetical protein	MPKNRHRRLLQLYGEINELGAILDAPKPKDIHPHEWILMKDQLYYMRQYYRVLKQRTDDTEN*	.	hypothetical_protein	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0015	shell	direct	high	188	0.995	GCA_009379305.1_00969
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	168217	169125	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	8421	9329	GCA_009379305_1_12_154	GCA_009379305_1_12_154	+	173461	.	PDB:5NGJ_B	Tail-tube-protein	MSSGAFVKTAYAKQTGETLPKTGWKTLPNISNGLTVATELTNSEMLSGSRMAKAGMVTSASVQGDIETELMFGAYDELIAAAFWSEWSAGASPNTLSVGATKHQFAIAKDFSDINVNHVFTGCVVSSFGLSVDTSSLIKLKFGMTGLGYQESKTTSFAKTPTAQADTAKASGLSIGEIKVNGTKLDVCVESFSFELDNQTEVQKCLGDNIYGGNILAMLTNITGSMTIAYSQKAHEMISNQMTGTTLSLELPIKFGNSKYVIKIPKFQVSGEIPSPSGTDLVTVDLSYTVVDESPVIEKHTA*	hallmark_hmm	common_virus	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0016	shell	direct	high	908	0.999	GCA_009379305.1_00970
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	169209	169355	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	9413	9559	GCA_009379305_1_12_155	GCA_009379305_1_12_155	+	173461	.	.	hypothetical protein	MEYITIIVDFMKYLIEKHGLFVIWLMVASLITLYKLDMILTAVHLFFN*	.	hypothetical_protein	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0017	shell	direct	high	146	0.993	GCA_009379305.1_00971
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	169406	169867	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	9610	10071	GCA_009379305_1_12_156	GCA_009379305_1_12_156	+	173461	.	.	hypothetical protein	MAFDLTLLKKDAKMSAKREIEFDGLELTLEIQASEAFKRAAAEVQKIANTPKKVTKDSLKRDSQDEIGEYEAMLFILGEYCISQWNVTADGEPLAINGDNFLILLDQGFEKDKLTQFITLLFETYASLSQEFEDNKAKLVKKSTTATNGKKSG*	.	hypothetical_protein	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0018	shell	direct	high	461	0.998	GCA_009379305.1_00972
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	170233	170757	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	10437	10961	GCA_009379305_1_12_157	GCA_009379305_1_12_157	+	173461	.	cd12190	Bacova_04320_like	MKNLLIAGVVGLSLVGCATTGGAVIEPMTSYQRIVDVPNVKQDMIYEGSRQWVAKNFRSANSVIQYQDKATGSVIGKGNMSYPCSFLRCSSGSTPVLQFTFQVDSKDNRARVSFSDLTIHTPASVSPITGIRSTEMNEKVIKENDKMQTKEILDKVIDDLAQDIASPSVGSKDW*	hhsuite_tools	hypothetical_protein	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0019	cloud	direct	high	524	0.998	GCA_009379305.1_00973
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	171070	171915	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	11274	12119	GCA_009379305_1_12_158	GCA_009379305_1_12_158	+	173461	.	PFAM:PF10547.8	P22_AR-protein	MQTQISIFNFESTKQVRTAIRNGGDIWFCLPDVANVLEISRSSDLLQVAKPAFVKNETSSKRGALDPAGVHKMYISYESGKKQVTFINEPNLYRVIFRSNKAEAVKFQNWVFDEVLPTIRKTGQYTIAFATKDERKPLVQAVNMLVGETGAVYSNVWKMIHQRFDVDCVDELTNEQVYQAVEYVHGLILQHGKKPVDDVLLYKVLVDSAVYLRDYAQLIKQMRDIRFFDENMGKNMYNFVADNINDIVRLTHDMKLTNKNGRPMFEKNRLNYYDGAALIYR*	common_virus_hmm	common_virus	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0020	shell	direct	high	845	0.999	GCA_009379305.1_00975
GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote	cenote	CDS	171956	173449	GCA_009379305.1	NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305.1_NXDH01000002.1	GCA_009379305.1|NXDH01000002.1	GCA_009379305_1_12	GCA_009379305_1_12@C13	12160	13653	GCA_009379305_1_12_159	GCA_009379305_1_12_159	+	173461	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MGYWYLLNRPDWAFLLGEFMLNTYRLDIQVNADSANTALGNLKEHFDKIEQSSGKAGVGIDGFSDKADKASKSSKKAGDEAKKAGDGAKKFGDGAKKAGDDVDGLKRKTDGLKTAFGTLKGVMFTALAVAGVGGIIQTADDMQTLTSQIKIATTSTKDYAHAMSEIERIAMGNMVSLDSVGQLYASNERSLKQLGKSQDEVIKFTENITTAMRVSGGSAESQAAALTQLGQAMASGVLRGDEFNSVAEQAPVIMELMADSLGVTTGKLRDMAKEGKLTSKVVYDAIAGASASDKLAEKSKKMSTTISGAMQNIQTQWRLGVDAIMNGEGGLSSVLADGINSIALGASSFVDSLPAINQAITDTIAKAKEMGTAFLESDFGQSAIQTAKDAFEQLKSAMQGVVDIAGDVKAFFEKNPELAIALASGVGAVAGAFLLFKGVLIVWAGVATLATVAGGGWGGGGGGQPDRVSVWFGGFVARGGGGGVWFPNLGNNKPFLL*	hallmark_hmm	common_virus	C13	13665	159797	173462	GCA_009379305.1|NXDH01000002.1@region_159798_173462@tool_cenote_CDS_0021	shell	direct	moderate	1436	0.961	GCA_009379305.1_00976
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	21261	22469	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	1	1209	GCA_009379305_1_13_20	GCA_009379305_1_13_20	+	63660	.	COG4536	Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains [Inorganic ion transport and metabolism]. 	MPRPRTQNLANLSFVSIAIFTVSVAAIFIPSTAFAAFELGGTPTNLALLIFFICLSLVVSFLCSISEATLLTMTPSYIDTLEEDNPKGAALLKSVKVDHIEKSISAILTLNTVAHTLGSLGAGAQAVIVFGNAWFGVFSGVMTLIILIGTEIIPKTIGTVYWRRFAMPVAYYVRTINVALLPIIWVTEKISRMLTRGNQEIGFNRHEFLALANQGESLGQMSEMETRIIKNSLALGMINVEDILTPRSVVSAFDENMTVGDVFASYPKLPFSRFPIFDEDLDNATGFILKSDLLIAKANQEIHTPIKQFRRDINFVFAKMKLFDLLDLMLKEQVHIALAVGEFGEVKGLVSLEDVLETLLGLEIVDEFDRVDDMQILARQLMDKRMARLGAKLEEDAPFDEN*	mmseqs_cdd	nonviral_gene	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0001	persistent	direct	high	1208	0.999	GCA_009379305.1_00997
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	22575	23180	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	1315	1920	GCA_009379305_1_13_21	GCA_009379305_1_13_21	+	63660	.	PF13474.6	SnoaL-like domain	MAYSFIDKYIEYKGWFMKYSTRSVLRKAVAASMLTAVIRSAIQLTGKSFGKGASIGLFIGMIGVQSLITTNAYAISEQDVSRYASSMSSAANAQNIAQISRLIDDDAIISLSRGGKTTSLDKEGYLQLLQKSWATSSDYRYRINVADVVVTGNQARAQIVTTETWTQDGKPVTIKTASRATFSQVGNNAVLLRSVSQVTVD*	hhsuite_tools	hypothetical_protein	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0002	persistent	direct	moderate	557	0.919	GCA_009379305.1_00998
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	23375	26245	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	2115	4985	GCA_009379305_1_13_22	GCA_009379305_1_13_22	+	63660	.	PDB:5EMI_A	Cell-wall-hydrolase-autolysin	MKKHTKSSISTQILKPLSLAISSCILVACSSTGTPAKPVSQTPKPIPQAKPSQQINISSGNTNLGNTKTGADVDVLDVQMLDALEALLQATDMSMVEGDELAIQRYGNLWDRVRRGYRINEMTNARIEAQKSWFYTRQTYLDRLTARASRYLHHTVAEAERRGIPSELALLPIIESSYDPTATSNAAAAGLWQFIPSTGRIYGLNQSATYDGRRDVIESTRAAYDFLTSLYNQFGSWELALAAYNAGPGRVSRAIKANQDQGLPTDYWSLKLPTETMNYVPRFLAVAQIVRSPNTYGINLPAIANHSHFRTVPVNYGVSLSEVATVTGLSVSELRLLNPALLNFTVDEIGPNRIVIPDSLPNQIDNQLASLKGYGFGGDYIATAPAQSITYVVPKSGATANTSSQQELIAANTLPTTIAQVTPNNTIVQEPALSKSEINLIAAEIQKTSPEVPAISPQDGNIQLNAVQTGQSVLDARGETKMLSFADGPKTQAVAQQPTQPVQVAVTPPAQPVQITVVSPTPEPISQPKPQLPPVAASIPVVSSPPVLVPPLPSRPRPEPASRPKPKPESYTVRAGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKRQPVSAQTPSRQSTSTANTNSATHKVSAGESLTAIARKYNISLHALAKENGLSVTDGVLIGQTLKLPSDAKTANTTMANTSSSPSVNKPESYTVRAGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKRQPVSAQQTSQATQSTKNNQSTATHRVQSGESLTAIARRYNISLHALAKENGLSVTDGVLIGQTLKLPSDAKAESSTPSRLGNTKNNSTRTPANTNIGITENYTVRSGDSLTMLSNRFGVAIGDLATANGLASNANLRIGQTLKVPKLTTTYTVKAGDGLIALARRYGISTQELAKMNNLEPTADLRIGQVLTVPNK*	common_virus_hmm	common_virus	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0003	persistent	direct	high	2870	1.0	GCA_009379305.1_00999
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	26403	28235	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	5143	6975	GCA_009379305_1_13_23	GCA_009379305_1_13_23	-	63660	.	COG1274	Phosphoenolpyruvate carboxykinase, GTP-dependent [Energy production and conversion]. 	MTAKITAPDFVRHQALIHWVAEIAALTKPAAIEWCDGSEEENQRLIDLMIKNGTMIKLDEDKHPNSYLAFSDPTDVARVEDRTYICSKEEIDAGATNNWVEPSQMRTKLNDLFDGCMAGRTMYVVPFSMGPLGSHIAHIGIEITDSPYVVVSMRKMARMGKEVYDVLGADGEYVPCVHTVGSPLTEGQKDVAWPCNDDKYIVHFPETREIWSYGSGYGGNALLGKKCLALRIASAMGREQGWLAEHMLILGVTNPQGKKHYIAAAFPSACGKTNFAMLIPPAGYEGWKVETVGDDIAWIKPSEDGKLYAINPEAGFFGVAPGTNTKTNSNCMSTLGSDVIYTNVAVTDDGEVWWEGKTKETPANLTNWKREPHTGAERAAHANARFTVSAKQCPSIDPQWENPEGVPISAFIFGGRRADTVPLVSEAFDWVDGVYKAATMGSETTAAATGQQGVVRRDPFAMLPFTGYNMADYFNHWLQMGENLGKKAKAAGNQLPKMFKVNWFRRDTNGDFVWPGFGQNMRVLQWIIERCEGTANAVRTPIGLVPTYDDINWDQSDFTKAQFELVTSQDKDAWIKELESHAELFDKLGERMPTALKAHNAKLKADIEQA*	mmseqs_cdd	nonviral_gene	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0004	persistent	direct	high	1832	0.999	GCA_009379305.1_01000
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	28533	29951	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	7273	8691	GCA_009379305_1_13_24	GCA_009379305_1_13_24	+	63660	.	PDB:3BH0_A	Helicase-ATPase	MAKAKSSYICQNCGAIYGKWAGQCTDCGEWNTLVEAPNTSLPHHHKSKTTTAPRKTANYAGAVSAVMTLDHVGVTLETRMPTGIGEFDRVLGGGLVAGSVVLIGGDPGIGKSTILLQTAINMAAGDSLSGSALYITGEESLSQVAMRAVRLGLPTDRLRVLAETNVDTICAALTTEQPAIAVIDSIQTLFTEAIQSAPGGVAQIRESAAVLTRYAKQTGTALFLVGHVTKEGALAGPRVLEHMVDTVLYFEGESDSRFRMIRAIKNRFGAVNELGIFGMTDTGLKEVANPSAIFLSRYDKPIAGSVVMVSREGTRPLLVEVQALVDDSQGQPRRMALGLDYQRLSMLLAVMHRHGGIHTSGMDVYVNVVGGVKVMETGSDLAVLIACASSIKEKPLPVRLCVFGEVGLSGEIRPVPNGQERLKEAMKHGFTHAIVPRANAPAANHPQFKNIQIIAVDRLDEAIYQAFEINAG*	rep_hall_hmm	common_virus	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0005	persistent	direct	high	1418	0.999	GCA_009379305.1_01001
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	29993	30712	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	8733	9452	GCA_009379305_1_13_25	GCA_009379305_1_13_25	-	63660	.	COG1118	ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]. 	MSIKIQNIHKTFGDFVALGEISIDISTGELTTLLGPSGCGKTTLLRIIAGLENADNGRIYFDSIDVTDIPVQHRGIGFVFQQYALFRHQTVAQNIAFGLTLLPRNTRPSANTIDRRVDELLDLVQLSHTKTRYPHELSGGQRQRVALARALATEPKLLLLDEPFGALDAKVRKSLRDSLKDIQREIGITSILVTHDQEEAQAISDKIVIMNHGQIEQIGTPSKLFAQPSSDFVVDFLGL*	mmseqs_cdd	nonviral_gene	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0006	persistent	direct	high	719	0.999	GCA_009379305.1_01002
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	30805	31644	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	9545	10384	GCA_009379305_1_13_26	GCA_009379305_1_13_26	-	63660	.	COG4208	ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]. 	MSHTSSYSYQKNPATRDKPWVRWSLIGIAVVFMGVMLVVPLVSVFYEALKEGWQAYQAALLEPDALASIKLTLITAAIILPINTIIGVALAYLITRHQFRGKFVITTLLDLPFAVSPVVAGLMFVLVFGANTRLGGYLESMGIQVIFATTGIVLATLFVTFAFIARELIPLMQAQGDSEEQAALTLGANGWQMFWKVTLPNIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTVPLMIEIAYNEYAFTLAFALSSLLALLALITLVAQGLMSHKK*	mmseqs_cdd	nonviral_gene	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0007	persistent	direct	high	839	0.999	GCA_009379305.1_01003
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	31689	32567	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	10429	11307	GCA_009379305_1_13_27	GCA_009379305_1_13_27	-	63660	.	TIGR02139	sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]	MLNQPMPLKNRARRVMPFFGLSMGISIFALGLLVILPFLMMILTTLQMSFDDIMQTIREPQVFAAIKLSLSMAMLATLTNLIFGTLAAWVLVRYEFWGKSFLNALVDLPFALPTAVTGIALATLYAPNGLFGQWFTRLGILLFNEPIKIAFTPIGIWLALVVVSFPFIVRAVQPVLAELSVEFEEAAAVMGAGRLTTFCRVILPEISPAMLIGAGMMFARATGEYGSVIFIAGNIPMQSEILPLIIVSKLEQFDVAGAACVSLFMLLISLVFLFTMNFIQWKLSARLGAKTN*	mmseqs_cdd	nonviral_gene	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0008	persistent	direct	high	878	0.999	GCA_009379305.1_01004
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	32917	33357	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	11657	12097	GCA_009379305_1_13_28	GCA_009379305_1_13_28	+	63660	.	.	hypothetical protein	MMMKNKWMRGLAILVLSLPTVTYAKTAAPKASEAPEVSLTQEEQMAIDFCDFSAYGVMHIAGDHQGGATKSEALTNHDKRMAELKDLIDLDPETATMLDKYWKGAIDRIFQESVQKTDAEKQAFVMGVGESSFYSCLDQVLKTPKN*	.	hypothetical_protein	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0009	persistent	direct	high	440	0.998	GCA_009379305.1_01005
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	33388	34563	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	12128	13303	GCA_009379305_1_13_29	GCA_009379305_1_13_29	+	63660	.	PDB:1OYW_A	ATP-dependent-DNA-helicase	MTETTVKNFDDLPLSEPILKAVQALKFDQLTPIQAQILPHTLANQDAIGQAQTGTGKTATFLITIIESLLKRPFQADEIRYLGEPRALVLAPTRELAQQILADCRELTRFSQLYNLCITGGSDFDKQLEQLHKRPLDILIGTPGRIIDWVNKGELFLDRVEVFVLDEADRMLDMGFIPDIKRIVRHMPSNTERQSLLFSATFNQDVMNLAYRWLHQPAFVEIAPESKTNQAIDQQFYLVTEREKTSALKQILADDSVKKTIIFANRKDQVKRLYDYLRRHHKVTMLSGDVAQQKRERYLQRFKDGEVNVLVATDVAGRGIHVDDVTHVINYTLPDMPDDYVHRIGRTGRAGLSGVSISFVSENDAFNLPALERHIDQKFKLNQFEFLDEHK*	common_virus_hmm	common_virus	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0010	persistent	direct	high	1175	0.999	GCA_009379305.1_01006
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	34577	35752	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	13317	14492	GCA_009379305_1_13_30	GCA_009379305_1_13_30	+	63660	.	COG0635	Coproporphyrinogen III oxidase or related Fe-S oxidoreductase [Coenzyme transport and metabolism]. 	MYPDLLDPAHIPLSLYIHIPWCVKKCPYCDFNSHALPSQVPFENYIEALLSDAVSQQSLVSNRQIDTVFIGGGTPSLLPIESFKRLFDGLRLIYDFAPTCEITLEANPGTLEHSPFDEYLTIGINRLSIGVQSFDHNALTVLGRIHNPDQASNAIRAARIAGFDRVNADLMYGLPNQNPSKAVNDIQTAIDAGATHLSWYQLTIEPNTTFYCTPPQLPDEEIMAEIETLGQSVLTKHGFYNYEVSAWHGPNDAPCQHNLNYWQFGDYLAIGAGAHGKLTLKNHPDYQDGIYRYQKSRQPKDYLAFEDAPKMVNFERISDDNLPFEFMMNALRLKDGVSTDVFETRTGLLISTIDNEMLPLQHQGLMVLDPLRIAPTRLGFRYVNYLVSQFI*	mmseqs_cdd	nonviral_gene	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0011	persistent	direct	high	1176	1.0	GCA_009379305.1_01007
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	35834	35974	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	14574	14714	GCA_009379305_1_13_31	GCA_009379305_1_13_31	-	63660	.	COG5510	Predicted small secreted protein  [Function unknown]. 	MKKVLVASIATVVVLTGCNAIKGFGKDVSKAGEAVSDTAQKVEKKI*	mmseqs_cdd	nonviral_gene	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0012	persistent	direct	high	140	0.993	GCA_009379305.1_01008
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	36222	36767	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	14962	15507	GCA_009379305_1_13_32	GCA_009379305_1_13_32	+	63660	.	COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ribosomal structure and biogenesis]. 	MSQFSDALIHIVLFSPKIPNNTGSIIRLCANTGAQLHLVKPLGFELDDTRLKRAGLDYHEYATLSVHDNWQETKSALKSLGVERIVAMTTKFSRPFYEYQFKLDNDQHKVALVFGSETDGLPEEVRADIGANHWLRLPMLPDSRSLNLANSVGICLYEVWRQLGFVGDIGQSVGYHKPTSR*	mmseqs_cdd	nonviral_gene	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0013	persistent	direct	high	545	0.998	GCA_009379305.1_01009
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	36883	37098	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	15623	15838	GCA_009379305_1_13_33	GCA_009379305_1_13_33	-	63660	.	.	hypothetical protein	MTDSTTSPARQKATNTYRQKALANIALVISHTEPHVLDALNQIMAHKDCSKAMAIKVALVEYANTLSQTSR*	.	hypothetical_protein	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0014	shell	direct	high	215	0.995	GCA_009379305.1_01010
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	37501	37905	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	16241	16645	GCA_009379305_1_13_34	GCA_009379305_1_13_34	-	63660	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MLYPIAILKGGDKTAHGIFFPDVPNLASACDELQDIHKMALECLDVHFSGLVADGEEIPLPTNFDAHTQNSQFDGMMWAWVDVDLSKYDVKSHKINITLPNHLIAKIDEKVAAHKSLYKSRSNYLAQLAMADLA*	mmseqs_cdd	nonviral_gene	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0015	shell	direct	high	404	0.998	GCA_009379305.1_01011
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	38170	38367	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	16910	17107	GCA_009379305_1_13_35	GCA_009379305_1_13_35	-	63660	.	PFAM:PF16777.4	transcriptional-regulator	MPKIVANPKTRAQIQKDSDARRGVKPIGFKVPIEFAELLDELAKQSGKTKNIIIMEAVELWAKQL*	phrogs_hmm	hypothetical_protein	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0016	persistent	direct	high	197	0.995	GCA_009379305.1_01012
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	38945	39382	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	17685	18122	GCA_009379305_1_13_36	GCA_009379305_1_13_36	+	63660	.	6AF2_A	HIT domain-containing protein	MFQLHPTLAKDTFLVGDFPLSTVRLMNDCQFPWLILVPRVSGIKEIYELSAADQVQFLRESSWVSSQMAKIFGADKMNVAALGNQVLQLHFHHIVRYQNDAAWPNPVWGHEAMPYTQEVLSHMQQTLMMALRGHHQMPFDWKMDV*	hhsuite_tools	hypothetical_protein	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0017	persistent	direct	high	437	0.998	GCA_009379305.1_01013
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	39536	40198	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	18276	18938	GCA_009379305_1_13_37	GCA_009379305_1_13_37	+	63660	.	PRK00043	thiamine phosphate synthase. 	MTLQSIDKVPKLYLLTNDDELTTLLDKLERVFDTGAVSLLQVRRKSTLKLYDLATVYREAEMIVSLANDYDIKVVMNDSLELASHFGTGLHLGQRDGSVRVAREILGDHVVIGRTCHTDLALFKEAKREGATYGAMGTAFASITKPRAKIISKDILKKACELDFPLCVIGGITLENIHQLRDKLNGAAIDYIAVTADIMGHSVDTIADKCLAWQQKLNTW*	mmseqs_cdd	nonviral_gene	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0018	persistent	direct	high	662	0.998	GCA_009379305.1_01014
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	40203	43757	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	18943	22497	GCA_009379305_1_13_38	GCA_009379305_1_13_38	+	63660	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MIDTFKPKLDLPTKANFKTTLPLLGGADLSFWLALAAKSEERLIVMIANHQNELNQLDTELSFFGIDAHVFPDWEILAYDQLSVHQDIISERIALLTRMPTTGVLLVSTQTLMQRIAPPSWLIGQHFDLAVGDKFDIHEQRLRLTKAGYVQTENVFEPGEFAVRGSIVDIFAVGQSLPFRLDLFDDNIETIKFFDPDSQRTLSDNDLAQLKKDAQAGMNTHHAQKLPSSAKITEFRLLPAREFPLEAGKEMFRQNFASLFPNASARKIEFYNDVMAAIAPQGIEFYAPLFFELDAWMKTGNLFSYLPDDTLVVSHDNLSACHDEYYQQIQARHHSRAHDKSLPIMPPDYLFLANNEFHQVLKAYPRVVINTNHDTAKIGAMESLPPPILPINHQAAKPLSELLSFIKSGQVPILLVAESAGRREIILELLKDKVAVKVVDNYQEFINNLDDFNTDCIALSVAPIERGLWLRDETGGLCIISETQIFGRQVLQTRRRRQSSVSQAFLIKSVTELTEGALVVHLEHGIGRYQGLVVLDVGEGEQEFIHLKYADDASIYVPITNLALIGRYSGSDLQTVSLSKIGSGKWEKAKLKALEQIHDVAAELLNVQARRNAKSGISFDIDMSQYELFASQFAFEETIDQAEAIHAVMHDMKQNKPMDRLICGDVGFGKTEVAMRAAFIAVQAGYQVAVLVPTTLLAGQHEDSFLNRFADWPIKIESLSRFGNKKHQDAILAGLADGTVDIVIGTHKLIQDDVKFKQLGLMIIDEEHRFGVRHKERIKALQTNIDSLSMTATPIPRTLNMALSGMQDISIIATPPARRLAIKTFLLPKSDETIKEAILREILRGGQVYYLHNDVASIEAAADTLRELVGEARVAVAHGQMNERELSVVMNDFYHKKFNVLVASTIIETGIDVPNANTIIIHRADKFGIAQLHQLRGRVGRSHHQAYCYLMVPSLKGLSSDAKKRLNAITRANTLGAGFMLASEDLEIRGAGEILGKEQSGNMQTIGFGLYMDMLERATNAIKQGKTPSLATPLDLVSDIDIHASALIPDEYLGDVHERLVFYKRISSLDDVNQLIDIRTEMIDRFGTLPTQTQNLFAVHRIRIRAKALGIAKIDATQTTISIEFRADTPIDGLAIIKLIQSNDGYRMNGATAIRYTSQELMDTQARIDKVNELLLYFESTKTA*	common_virus_hmm	common_virus	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0019	persistent	direct	high	3554	1.0	GCA_009379305.1_01015
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	44023	45285	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	22763	24025	GCA_009379305_1_13_39	GCA_009379305_1_13_39	-	63660	.	TIGR02800	tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MKSPITKVCLALTISFSAALTHTYADDELIVISEQVAPSQYPVAVMPFSEAHQMSHYLSLAGLGTTHQNLPQHTQTNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEIIDTANGLVSVKHTQISDNHPASIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNKISSLKLIDPSGQLIRTLDTVNGSIITPTFSPDGLSIAYSVQTKNNLPIIYIVSVSGGTPKLVTPFWGHNLAPSFSPDGGSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPNYLADASGFIYTADKGTRRQSLYRYDFGTTHSTQIASYATNPRLSPDGSKLVYLSGGQIIIANTKGRIQQSFRVLGTDVSASFSPSGTRIIYTSNQGNKNQLMIRSLSSNAIRTIPTSGTVRDPIWSK*	mmseqs_cdd	nonviral_gene	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0020	persistent	direct	high	1262	0.999	GCA_009379305.1_01016
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	45302	46102	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	24042	24842	GCA_009379305_1_13_40	GCA_009379305_1_13_40	-	63660	.	4G7X_B	Putative uncharacterized protein, TolA protein	MRLSDNHPTVNFDKSALILPILASVLLHTVIIIAVAAPLITPPTKPNTTIQTALVGQEAFNRAKTALSNHHANQNKPTATNTSSTITANDNDNAFMQAQNQHRYHPQVSTSATTTQAYHPPPNSAPFESNSPNIQNQPTNAHAKLAEYSNHVSDLEQSNHTESTPSRAQINAAITSVKHRIEAIWQRYPKQPNQTITFQVNMNQQGDVTSIQFGGGHPDLRESVEAAVYAAAPFYELGGMRDSIRLQFTTEQLIMDNNQTTNEPNH*	hhsuite_tools	hypothetical_protein	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0021	persistent	direct	high	800	0.999	GCA_009379305.1_01017
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	46133	46567	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	24873	25307	GCA_009379305_1_13_41	GCA_009379305_1_13_41	-	63660	.	TIGR02801	TolR protein. The model describes the inner membrane protein TolR, part of the TolR/TolQ complex that transduces energy from the proton-motive force, through TolA, to an outer membrane complex made up of TolB and Pal (peptidoglycan-associated lipoprotein). The complex is required to maintain outer membrane integrity, and defects may cause a defect in the import of some organic compounds in addition to the resulting morphologic. While several gene pairs homologous to talR and tolQ may be found in a single genome, but the scope of this model is set to favor finding only bone fide TolR, supported by operon structure as well as by score. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MVTSNRFARRQRPLNSDMNVVPYIDVMLVLLVIFIVTAPMLATGIEVSLPKEQTKPITQADKLPVIVSIQADGNLYVSHKNAIDVPITPDKLDTLLRQMHQDNTDLQVMVNADADNAYSRIMQIMALIQNVGITQVSLLSESVQ*	mmseqs_cdd	nonviral_gene	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0022	persistent	direct	high	434	0.998	GCA_009379305.1_01018
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	46593	47282	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	25333	26022	GCA_009379305_1_13_42	GCA_009379305_1_13_42	-	63660	.	TIGR02796	TolQ protein. TolQ is one of the essential components of the Tol-Pal system. Together with TolR, it harnesses protonmotive force to energize TolA, which spans the periplasm to reach the complex of TolB and Pal at the outer member. The tol-pal system proves to be important for maintaining outer membrane integrity. Gene pairs similar to the TolQ and TolR gene pair often number several per genome, but this model describes specificially TolQ per se, as found in tol-pal operons. A close homolog, excluded from this model, is ExbB of the ExbB/ExbD/TonB protein complex, which powers transport of siderophores and vitamin B12 across the bacterial outer membrane. The Tol-Pal system is exploited by colicin and filamentous phage DNA to enter the cell. It is also implicated in pathogenesis in several bacterial species [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MNESISLISLVIEASVVVKLVMAILLLLSTISWVLIFHLGTKIGGIAKFDERFERWFWTDDIDHQLSVVQAESERAGLELIFYIGFYDQNHQDQDSSLSDDKKVQIVERRLRMALGSEQVHLEKGLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQAESVGLATVAPSIAEALIATALGLFVAIPATMAYNHFATKSNTLYENRSLFCEGLISALVTNLAKKNTASTL*	mmseqs_cdd	nonviral_gene	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0023	persistent	direct	high	689	0.999	GCA_009379305.1_01019
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	47559	51731	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	26299	30471	GCA_009379305_1_13_43	GCA_009379305_1_13_43	+	63660	.	PDB:5XDR_A	Replicative-polyprotein	MHSTDNLPVLAKDRHYLNKLKQKMNSTTGDLKTKCKIRYDAIYERSAEQVANRMDSIPKNLSEKLNHDLPVTAEADTLIQAIRDHQVVIIAGETGSGKTTQLPKLAMMAGRGITGQIGHTQPRRLAARSVAMRIAEELGEPLGQTVSFKIRFTEEGGKHSIVKLMTDGILLAELGSDKFLANYDTIIIDEAHERSLNIDFIMGYLKRLLPKRPDLKVIITSATLDTQRFSDYFAANGKPAPVYIVEGRSYPVEVRYHPLTDTIVSSQDDDAFDDIEDNLPRALTAAVNECFEDARTKGHPDQADILIFAATEAEIRELQEVLMLYEPAHTEILPLFARQSYGEQQKIFAPSGKGRRIIIATNVAETALTVPNIRYVIDLGFARISRYNYRSRIQRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFNSRPEFTEPEILRTNLASVILQMERLQLGDVNAFDFITPPDLRLVNDGRKLLIELGALDDKSFTKTRAKKGRTQLSSLTKIGQQMAKMPIDPRLARMLVAGDAFDCLADILIIVSALAVQDVRERPINKHAQADQKHALFRKEDSDFLFYLELFAALFDQHSTNDNQALSSNARRNFAKKHYLSYARIREWQKTHRQLSEMMAEMGFEINKQKNHQNDVKIDTKKGVRLSLKPGTSHQKSIKQALVGAKALKNDIDNKTSIHYANIHRALLSALLSFVAHKTDTVGEYLMARSQKARIFPASTLHKKGAQWVMAFEVVETSQVYMRTLAKIEPEWIIKAAPNLLKYHYFEPHWSKKAGRVRAYAQISLFGLIVIAKELVNFEQIDLVQAREIFIRDALVANQYGMQMKFLADNANKIKDIERIEDKLRRRDLLVDEESLYQFYDAKIPNHIASRKSFEEFYHDAENKTPNFLHFSDEDVLNEAVDDSREFPESWHLGGVRLPLSYVFDPAADNDGVTVHVPIKALAQVDPVALLWGISGWRYELVLQLLKTLPKEIRRQIVPIPDTCQKIFHQLDASSKMGLLDQLVAALKTLGVQAHAQDFAPDKVEDYLRPLICVVDDKNRVIEKSRDLPKLQARHRKASVQSIAIEQGVHHHFPNHFNFVKNKHTSGIVMQEFSALKADAAQSAVFIATFTEMNAALAEHKKGVLTLIKGHLGAKQKQLTGQIDKAFKLAFAPLGDLEKLKNIVVHATLEACLYDYGPDFDHKPVSQHGDHARAAIAGLITQNNQWLISHLPLDEREFDDCQDLILKNFLLVGQEILRNLKEIYTAWQTARGKLLMLDQEIFGENIEDIEDQLDDLQLANFVYQTDYRHWRQYPRYLQALNIRLDRLQHNLEADLDAVYLLDTHMERLARCVKNPKFAEYRWLVEEYRINLFAQPMKTVQPVSAKRLETLWANLTTQ*	common_virus_hmm	common_virus	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0024	persistent	direct	high	4172	1.0	GCA_009379305.1_01020
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	51993	53489	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	30733	32229	GCA_009379305_1_13_44	GCA_009379305_1_13_44	+	63660	.	5NSW_C	Multidrug efflux outer membrane protein	MSIKCQLVAIDNIIKPCYDKILNFVYFSTMKMPYFLLLGLLLVQQADADYSLLDAQKQLMSSSSAIQASHALYQADVLQAESLQKLHYPRISLNAHTFVLQQNSSIPLDHIKEQTAQHINTHFDHRFGSAPDGLLDALHDSTQTALDRLPDHQDVKLRHDGITPNITATMPIYTGGLISSSKNIANLQAQRGKFGLQERISLAKLNLIRHYFNVQLQKQLTDTQQNMLSAMQLHVDNAYKLEQQGFISRGQRMQFEVARNQVQRLYQSTQNQHQNSIYELAVLLGLPHIEPLSTPLFINTQHRPNWQALLKDSQNTPLNQKLKTDILLADENIALRQSTKKPKIAAVARYTLDDKPDWFAGVAVSYNLFLGIDRDKQIEAAHLQKQAAQLGHEQVNEHITTTMHTAYGEMVLAQKTHALLQQNRQAAKENLRIQTLSFQEGFGTVAGVVDAQSALSQIDSETALNAYRYLLALATLLHHTGTIDDFDDYLSLDDVHKL*	hhsuite_tools	hypothetical_protein	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0025	persistent	direct	high	1496	0.999	GCA_009379305.1_01021
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	53536	54699	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	32276	33439	GCA_009379305_1_13_45	GCA_009379305_1_13_45	+	63660	.	COG1566	Multidrug resistance efflux pump [Defense mechanisms]. 	MTDKTDDAKPDTDGNHPKKQKPHTQAKSKPRPLALFLLLALIGSVLLVIIFGLIQSYGTPQNLPTANAIGSTNEPPKGVIAHLRQKITGPATFSIQGRVEGETVNISTKLPSRVAAIYVKEGQAVRAGEPLVQLISPEIDAKKQQAAAMLQSALAFQSSTDRGTRQENVDTLYANWQSAKAQATLAEESHRRGEYLYQEGVISRQRRDEMRAAKQSSAQIAHAAQQQYLKAQRGRTDELKSSADAQVQIARAAVAEADALDAETMLYAPIDGTVSKIYIQSSELVMPAVPVMSLLDNHPTITISIQENQYSHVHALPKLTGFIPALNKTADFKIVHTDDEGEFATIKNTRQTGGYDIHSFKTKLEPITPIEGLKVGMSVIFDITVLP*	mmseqs_cdd	nonviral_gene	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0026	persistent	direct	high	1163	0.999	GCA_009379305.1_01022
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	54727	55905	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	33467	34645	GCA_009379305_1_13_46	GCA_009379305_1_13_46	+	63660	.	PF12698.7	ABC-2 family transporter protein	MIVRFIRAFCQAFLRELNRLSCNRFDLAMVMIAPLVIIVLFGAMFYHGKAHHLPVALVDEDNSELSHLIYQHIHHNETIKTVLILDNVQDAHHAINRLDVGGYIHIPKDAQNRLVRGENTGIHIAYNQSFFSIGSAISSALSKSTKGGITKFIQTKHLTGVLPHLSGNMPHVKISVLFNPNLSYEFFLEPFLVAAVLHLLLCCLVAHAIGQEFHEHSVHEWLYHSPFGALFGKISVYVLIISLWHGLWQAWLIGVRGWFVAGSLFVLIIGQLLFYLAYALFGAMVVLKTQNINKSYGILAVYGGSSMSFAGVTLPLNNAPSFTQFWSQIIPFTPFARLQVEQWVIGSPFIITLAHLNSLLIFVLIFAIASLLLLRHIKKTLIAIPNTPKDDS*	hhsuite_tools	hypothetical_protein	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0027	persistent	direct	high	1178	0.999	GCA_009379305.1_01023
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	55905	57005	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	34645	35745	GCA_009379305_1_13_47	GCA_009379305_1_13_47	+	63660	.	COG0842	ABC-type multidrug transport system, permease component [Defense mechanisms]. 	MRRFIKQYLTIWLDVIKDRSIFLTMVLSVVFYGFFYPFAYQAQRPADLPIVIVDEEPSPLTQAIIHTTSHTPNIHVLAVVSDFRQAQMLVQSAKADGILLLPNNLSQSIHHGQTGGVGLYLSSAYFLRTQNIGAGLVSSLQATIIQELGQVTQTRHKPMPELIHQSALFNPLSGYGSYIFPAVAPIIVYQTIVLGLAMLVAGYRQRLWRASACDFLAIYAVALTIGCLSCFYLFGFVFWWHDYPRGGNFWGMMLGVPIFVSCAIGVALLIASWVADGAKVGVLLIFSSVPLFMLTGLAYPLMAMPKFLQPLAHALPTTQGVQMFIQLNQMGVSIQDVWQKMAYLASVAVLCLGVAFWRLRLVNKSV*	mmseqs_cdd	nonviral_gene	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0028	persistent	direct	high	1100	0.999	GCA_009379305.1_01024
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	57329	57448	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	36069	36188	GCA_009379305_1_13_48	GCA_009379305_1_13_48	-	63660	.	PDB:2MXZ_A	L-alanyl-D-glutamate-peptidase-endolysin	MAQASGKLGVNVRWGGAWMVITGKAGTPQEWVKDYRAGG*	common_virus_hmm	common_virus	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0029	.	unmatched_CDS	none	0	0	.
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	57640	57822	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	36380	36562	GCA_009379305_1_13_49	GCA_009379305_1_13_49	+	63660	.	COG1598	Predicted nuclease of the RNAse H fold, HicB family [Defense mechanisms]. 	MHYPVTLTPDTDGFCVTFRDIPEAISQGDTTDEALDMAQDALMVAMEFYFEDNRAVPMPS*	mmseqs_cdd	nonviral_gene	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0030	shell	direct	high	182	0.995	GCA_009379305.1_01025
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	57850	58053	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	36590	36793	GCA_009379305_1_13_50	GCA_009379305_1_13_50	+	63660	.	PFAM:PF15919.4	toxin-antitoxin-system-HicB-like	MPPSVWVKVLLLNEMIAQNVSQAELAKRMGIVPQSLTRLVDLSHTTKIDTLANAFAKLGKQLQVGLV*	phrogs_hmm	hypothetical_protein	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0031	shell	ambiguous	low	20	0.098	GCA_009379305.1_01026
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	58033	58824	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	36773	37564	GCA_009379305_1_13_51	GCA_009379305_1_13_51	-	63660	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MRLTKTIKEAIHAHAKICYPAECCGLIIDGQYYPCDNVTPNPTEHFEIDPIDMFEMGEKGQIQAIVHSHPDGNAEPSEVDRVQMSIHGLDWVICAFGYHADGKEYFDVKRHKPKAYQAPLLGREYHHGVQDCYSLVRDYYHRELDIHLPDFHRTDGWWEKEHHLPLYENNFTKAGFIKMQDETDLQKHDVILCRVGRTHHVNHALIYVGDGKLKSETTPDCVGNALILHHPHGSLSVREIYGDNWQRRTAMVVRHQASNQTNL*	mmseqs_cdd	common_virus	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0032	shell	direct	high	791	0.999	GCA_009379305.1_01026
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	59207	59410	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	37947	38150	GCA_009379305_1_13_52	GCA_009379305_1_13_52	+	63660	.	.	hypothetical protein	MADKASPQARKKATANYFDKSLARIGLVISHTEPHVLDALNQIMAHKDCSKAMAIKTALVEYARTLD*	.	hypothetical_protein	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0033	shell	direct	high	203	0.995	GCA_009379305.1_01028
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	59407	60075	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	38147	38815	GCA_009379305_1_13_53	GCA_009379305_1_13_53	-	63660	.	PFAM:PF05100.11	minor-tail-protein-	MSFNTDIQQTTVQGFITLYELDARKLGGEIYRFHGHNDGVIRWQGQDFHPIAIKADGLEMRSDGRASTPKLSIGDKINGIQGAVSALCRLYDDFARAKLTVTHTLQAYLDSHDAQNYRQQEWYIEQKVSENPSLGIVEFELSNPVDFEGQKIPVRQITTYCNEAVCGRYRGEVCGYTGTARFTHDGKPTDDPTLDRCSGLLAHCKLRDNEGSFCGFPAAGLI*	hallmark_hmm	common_virus	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0034	shell	direct	high	668	0.999	GCA_009379305.1_01029
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	60159	60548	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	38899	39288	GCA_009379305_1_13_54	GCA_009379305_1_13_54	-	63660	.	.	hypothetical protein	MSEPNLTELSRTEAQVLQSFIAQVDFWKNQHGDKAATIEVIYYPEDDGFEVSNNEANNGVLKRNRTTAFRADLLAWASNQLRQLQGWDNSQTVTAFILSFKNNRYGVRAALASEATDKADDGDDAKNTD*	.	hypothetical_protein	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0035	persistent	direct	high	389	0.997	GCA_009379305.1_01030
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	60652	60984	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	39392	39724	GCA_009379305_1_13_55	GCA_009379305_1_13_55	-	63660	.	PFAM:PF05939.12	minor-tail-protein	MKTFTWDISADSSETTDLNTTITAFGDGYEQAVSFGINNSRKSWQCSKIDTKAVIDEIYRFLIDTKGVEPFNFKPLTDEPSIKVRLDGEVSRQKTGGDVWQIGFTLKQVF*	hallmark_hmm	common_virus	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0036	shell	direct	high	332	0.997	GCA_009379305.1_01031
GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote	cenote	CDS	61087	63657	GCA_009379305.1	NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305.1_NXDH01000020.1	GCA_009379305.1|NXDH01000020.1	GCA_009379305_1_13	GCA_009379305_1_13@C3	39827	42397	GCA_009379305_1_13_56	GCA_009379305_1_13_56	-	63660	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	GNSGGGALAAVMAVLTSPITLVIAAFAALVAAGVYVYRNWDTIKQKANDAWNSIKETWQGVGEWFGELWDKVKQTFFNWLSQMPKPVQDMVANIGEIFSTIVDVAGAVWDGIANIAKSVWHAITKFVSYAIDKIKPIIKSVLEFFKNAWDGLVGIAKTVWQAVVSVVSHVFDKISGIISTQFEAMKAIFMAGVTIFASIFNAGFEMVKNIFSTAFKVIKAVLTGDMQGVKDAIKDGFQKAVDILKKLVGNIVDALKKLGKDLLQVGRDAMQGFINGISEKIDAAVSKAKQMASSVKNAVTGFFDIHSPSRVMKQVGGWISEGLAIGIAYKAPIAAKEAKNLAKSVKNALESDLQKTAEEIFLTKQHIKGNPYAQLTKDIAFGKYGKQDTSRLQKLAQEQILQSNILTLTQQLHEAQQNLANVGLTSIEIMQRQYDETDKSVRASLDLFEQVKKTSQELIDATNRHEATQAFESTLKDIAKQMAIMGSQDPLAEFLYDLQNAEKYAYYTTEQLATLKDEMIKLQAAKDAKQASDGIEESLKDINKQLALLGSNHPLDDFFYELEQTDKYAHATTDEINELIDAIFKLQNAKDALNAKQAFDTLMKDTALANETPAQRLQREYDEKMAVIDRYEQMHSDKLENATSLRQQITERYEQAEKDAKVKNYQEHLTAFAGFLKNTAGEQSKAYRVMFAASKAYALADVGVKMGKAVADAWADPSAVTIWQKLANVAKVSLEQGHVLSMINAISPKGFATGGYTGNMGINQVAGVVHGQEYVLNAKATKRIGVSNLERLNRGDGIGGHVNHINVHVTVNSDGSNVQADTQMGKTMGEAMAKIARQVVIQESKQNGHLDRLYRR*	hallmark_hmm	common_virus	C3	42400	21261	63661	GCA_009379305.1|NXDH01000020.1@region_21262_63661@tool_cenote_CDS_0037	shell	direct	moderate	2538	0.987	GCA_009379305.1_01032