core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	101967	103175	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	1	1209	GCA_009379425_1_8_92	GCA_009379425_1_8_92	+	318622	.	COG4536	Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains [Inorganic ion transport and metabolism]. 	MPRPRTQNLANLSFVSIAIFTVSVAAIFIPSTAFAAFELGGTPTNLALLIFFICLSLVVSFLCSISEATLLTMTPSYIDTLEEDNPKGAALLKSVKVDHIEKSISAILTLNTVAHTLGSLGAGAQAVIVFGNAWFGVFSGVMTLIILIGTEIIPKTIGTVYWRRFAMPVAYYVRTINVALLPVIWVTEKISRMLTRGNQEIGFNRHEFLALANQGESLGQMSEMETRIIKNSLALGMINVEDILTPRSVVSAFDENMTVGDVFASYPKLPFSRFPIFDEDLDNATGFILKSDLLIAKANQEIHTPIKQFRRDINFVFAKMKLFDLLDLMLKEQVHIALAVGEFGEVKGLVSLEDVLETLLGLEIVDEFDRVDDMQILARQLMDKRMARLGAKLEEDAPFDEK*	mmseqs_cdd	nonviral_gene	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0001	persistent	direct	high	1208	0.999	GCA_009379425.1_00835
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	103281	103886	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	1315	1920	GCA_009379425_1_8_93	GCA_009379425_1_8_93	+	318622	.	PF13474.6	SnoaL-like domain	MAYSFIDKYIEYKGWFMKYSTRSVLRKAVAASMLTAVIRSAIQLTGKSFGKGASIGLFIGMIGVQSLITTNAYAISEQDVSQYASSMSSAANAQNIAQISRLIDDDAIISLSRGGKTTSLDKEGYLQLLQKSWATSSDYRYRINVADVVVTGNQARAQIVTTETWTQDGKPVTIKTASRATFSQVGNNAVLLRSVSQVTVD*	hhsuite_tools	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0002	persistent	direct	moderate	557	0.919	GCA_009379425.1_00836
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	104081	106951	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	2115	4985	GCA_009379425_1_8_94	GCA_009379425_1_8_94	+	318622	.	PDB:5EMI_A	Cell-wall-hydrolase-autolysin	MKKHTKSSISTQILKPLSLAISSCILVACSSTGTPAKPVSQTPKPIPQAKPSQQINISSGNTNLGNTKTGADVDVLDVQMLDALEALLQATDMSMVEGDELAIQRYGNLWDRVRRGYRINEMTNARIEAQKSWFYTRQTYLDRLTARASRYLHHTVAEAERRGIPSELALLPIIESSYDPTATSNAAAAGLWQFIPSTGRIYGLNQSATYDGRRDVIESTRAAYDFLTSLYNQFGSWELALAAYNAGPGRVSRAIKANQDQGLPTDYWSLKLPTETMNYVPRFLAVAQIVRSPNTYGINLPAIANHSHFRTVPVNYGVSLSEVATVTGLSVSELRLLNPALLNFTVDEIGPNRIVIPDSLPNQIDNQLASLKGYGFGGDYIATAPAQSITYVVPKSGATANTSSQQELIAANTLPTTIAQVTPNNTIVQEPALSKSEINLIAAEIQKTSPEVPAISPQDGNIQLNAVQTGQSVLDARGETKMLSFADGPKTQAVAQQPTQPVQVAVTPPAQPVQITVVSPTPEPISQPKPQLPPVTASIPVVSSPPVLVPPPPSRPRPEPASRPKPKPESYTVRAGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKRQPVSAQTPSRQSTSTANTNSATHKVSAGESLTAIARKYNISLHALAKENGLSVTDGVLIGQTLKLPSDAKTANTTMANTSSSPSVNKPESYTVRAGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKRQPVSAQQTSQATQSTKNNQSTATHRVQSGESLTAIARRYNISLHALAKENGLSVTDGVLIGQTLKLPSDAKAESSTPSRLGNTKNNSTRTPANTNIGITENYTVRSGDSLTMLSNRFGVAIGDLATANGLASNANLRIGQTLKVPKLTTTYTVKAGDGLIALARRYGISTQELAKMNNLEPTADLRIGQVLTVPNK*	common_virus_hmm	common_virus	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0003	persistent	direct	high	2870	1.0	GCA_009379425.1_00837
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	107108	108940	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	5142	6974	GCA_009379425_1_8_95	GCA_009379425_1_8_95	-	318622	.	COG1274	Phosphoenolpyruvate carboxykinase, GTP-dependent [Energy production and conversion]. 	MTAKITAPDFVRHQALIHWVAEIAALTKPAAIEWCDGSEEENQRLIDLMIKNGTMIKLNEDKHPNSYLAFSDPTDVARVEDRTYICSKEEIDAGATNNWVEPSQMRTKLNDLFDGCMAGRTMYVVPFSMGPLGSHIAHIGIEITDSPYVVVSMRKMARMGKEVYDVLGADGEYVPCVHTVGSPLTEGQKDVAWPCNDDKYIVHFPETREIWSYGSGYGGNALLGKKCLALRIASAMGREQGWLAEHMLILGVTNPQGKKHYIAAAFPSACGKTNFAMLIPPAGYEGWKVETVGDDIAWIKPSEDGKLYAINPEAGFFGVAPGTNTKTNSNCMSTLGSDVIYTNVAVTDDGEVWWEGKTKETPANLTNWKREPHTGAERAAHANARFTVSAKQCPSIDPQWENPEGVPISAFIFGGRRADTVPLVSEAFDWVDGVYKAATMGSETTAAATGQQGVVRRDPFAMLPFTGYNMADYFNHWLQMGENLGKKAKAAGNQLPKMFKVNWFRRDTNGDFVWPGFGQNMRVLQWIIERCEGTANAVRTPIGLVPTYDDINWDQSDFTKAQFELVTSQDKDAWIKELESHAELFDKLGERMPTALKAHNAKLKADIEQA*	mmseqs_cdd	nonviral_gene	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0004	persistent	direct	high	1832	0.999	GCA_009379425.1_00838
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	109238	110656	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	7272	8690	GCA_009379425_1_8_96	GCA_009379425_1_8_96	+	318622	.	PDB:3BH0_A	Helicase-ATPase	MAKAKSSYICQNCGAIYGKWAGQCTDCGEWNTLVEAPNTSLPHHHKSKTTTAPRKTANYAGAVSAVMTLDHVGVTLETRMPTGIGEFDRVLGGGLVAGSVVLIGGDPGIGKSTILLQTAINMAAGDSLSGSALYITGEESLSQVAMRAVRLGLPTDRLRVLAETNVDTICAALTTEQPAIAVIDSIQTLFTEAIQSAPGGVAQIRESAAVLTRYAKQTGTALFLVGHVTKEGALAGPRVLEHMVDTVLYFEGESDSRFRMIRAIKNRFGAVNELGIFGMTDTGLKEVANPSAIFLSRYDKPIAGSVVMVSREGTRPLLVEVQALVDDSQGQPRRMALGLDYQRLSMLLAVMHRHGGIHTSGMDVYVNVVGGVKVMETGSDLAVLIACASSIKEKPLPVRLCVFGEVGLSGEIRPVPNGQERLKEAMKHGFTHAIVPRANAPAANHPQFKNIQIIAVDRLDEAIYQAFEINAG*	rep_hall_hmm	common_virus	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0005	persistent	direct	high	1418	0.999	GCA_009379425.1_00839
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	110698	111417	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	8732	9451	GCA_009379425_1_8_97	GCA_009379425_1_8_97	-	318622	.	COG1118	ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]. 	MSIKIQNIHKTFGDFVALGEISIDISTGELTTLLGPSGCGKTTLLRIIAGLENADNGRIYFDSIDVTDIPVQHRGIGFVFQQYALFRHQTVAQNIAFGLTLLPRNTRPSANTIDRRVDELLDLVQLSHTKTRYPHELSGGQRQRVALARALATEPKLLLLDEPFGALDAKVRKSLRDSLKDIQREIGITSILVTHDQEEAQAISDKIVIMNHGQIEQIGTPSKLFAQPSSDFVVDFLGL*	mmseqs_cdd	nonviral_gene	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0006	persistent	direct	high	719	0.999	GCA_009379425.1_00840
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	111510	112349	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	9544	10383	GCA_009379425_1_8_98	GCA_009379425_1_8_98	-	318622	.	COG4208	ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]. 	MSHTSSYSYQKNPATRDKPWVRWSLIGIAVVFMGVMLVVPLVSVFYEALKEGWQAYQAALLEPDALASIKLTLITAAIILPINTIIGVALAYLITRHQFRGKFVITTLLDLPFAVSPVVAGLMFVLVFGANTRLGGYLESMGIQVIFATTGIVLATLFVTFAFIARELIPLMQAQGDSEEQAALTLGANGWQMFWKVTLPNIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTVPLMIEIAYNEYAFTLAFALSSLLALLALITLVAQGLMSHKK*	mmseqs_cdd	nonviral_gene	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0007	persistent	direct	high	839	0.999	GCA_009379425.1_00841
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	112394	113272	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	10428	11306	GCA_009379425_1_8_99	GCA_009379425_1_8_99	-	318622	.	TIGR02139	sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]	MLNQPIPLKNRARRVMPFFGLSMGISIFALGLLVILPFLMMILTTLQMSFDDIMQTIREPQVFAAIKLSLSMAMLATLTNLIFGTLAAWVLVRYEFWGKSFLNALVDLPFALPTAVTGIALATLYAPNGLFGQWFTHLGILLFNEPIKIAFTPIGIWLALVVVSFPFIVRAVQPVLAELSVEFEEAAAVMGAGRLTTFCRVILPEISPAMLIGAGMMFARATGEYGSVIFIAGNIPMQSEILPLIIVSKLEQFDVTGAACVSLFMLLISLVFLFTMNFIQWKLSARLGAKTN*	mmseqs_cdd	nonviral_gene	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0008	persistent	direct	high	878	0.999	GCA_009379425.1_00842
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	113622	114062	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	11656	12096	GCA_009379425_1_8_100	GCA_009379425_1_8_100	+	318622	.	.	hypothetical protein	MMMKNKWMRGLAILVLSLPTVTYAKTAAPKASEAPEVSLTQEEQMAIDFCDFSAYGVMHIAGDHQGGATKSEALTNHDKRMAELKDLIDLDPETATMLDKYWKGAIDRIFQESVQKTDAEKQAFVMGVGESSFYSCLDQVLKTPKN*	.	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0009	persistent	direct	high	440	0.998	GCA_009379425.1_00843
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	114093	115268	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	12127	13302	GCA_009379425_1_8_101	GCA_009379425_1_8_101	+	318622	.	PDB:1OYW_A	ATP-dependent-DNA-helicase	MTETTVKNFDDLPLSEPILKAVQALKFDQLTPIQAQILPHTLANQDAIGQAQTGTGKTATFLITIIESLLKRPFQADEIRYLGEPRALVLAPTRELAQQILADCRELTRFSQLYNLCITGGSDFDKQLEQLHKRPLDILIGTPGRIIDWVNKGELFLDRVEVFVLDEADRMLDMGFIPDIKRIVRHMPSNTERQSLLFSATFNQDVMNLAYRWLHQPAFVEIAPESKTNQAIDQQFYLVTEREKTSALKQILADDSVKKTIIFANRKDQVKRLYDYLRRHHKVTMLSGDVAQQKRERYLQRFKDGEVNVLVATDVAGRGIHVDDVTHVINYTLPDMPDDYVHRIGRTGRAGLSGVSISFVSENDAFNLPALERHIDQKFKLNQFEFLDEHK*	common_virus_hmm	common_virus	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0010	persistent	direct	high	1175	0.999	GCA_009379425.1_00844
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	115282	116457	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	13316	14491	GCA_009379425_1_8_102	GCA_009379425_1_8_102	+	318622	.	COG0635	Coproporphyrinogen III oxidase or related Fe-S oxidoreductase [Coenzyme transport and metabolism]. 	MYPDLLDPAHIPLSLYIHMPWCVKKCPYCDFNSHALPSQVPFENYIEALLSDAVSQQSLVSNRQIDTVFIGGGTPSLLPIESFKRLFDGLRLIYDFAPTCEITLEANPGTLEHSPFDEYLTIGINRLSIGVQSFDHNALTVLGRIHNPDQASNAIRAARIAGFDRVNADLMYGLPNQNPSKAVNDIQTAIDAGATHLSWYQLTIEPNTTFYRTPPQLPDEEIMAEIETLGQSVLTKHGFYNYEVSAWHGPNDAPCQHNLNYWQFGDYLAIGAGAHGKLTLKNHPDYQDGIYRYQKSRQPKDYLAFEDAPKMVNFERISDDNLPFEFMMNALRLKDGVSTDVFETRTGLLISTIDNEMLPLQHQGLMVLDPLRIAPTRLGFRYVNYLVSQFI*	mmseqs_cdd	nonviral_gene	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0011	persistent	direct	high	1176	1.0	GCA_009379425.1_00845
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	116539	116679	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	14573	14713	GCA_009379425_1_8_103	GCA_009379425_1_8_103	-	318622	.	COG5510	Predicted small secreted protein  [Function unknown]. 	MKKVLVASIAAVVVLTGCNAIKGFGKDVSKAGEAVSDTAQKVEKKI*	mmseqs_cdd	nonviral_gene	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0012	persistent	direct	high	140	0.993	GCA_009379425.1_00846
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	116927	117472	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	14961	15506	GCA_009379425_1_8_104	GCA_009379425_1_8_104	+	318622	.	COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ribosomal structure and biogenesis]. 	MSQFSDALIHIVLFSPKIPNNTGSIIRLCANTGAQLHLVKPLGFELDDTRLKRAGLDYHEYATLSVHDNWQETKSALKSLGVERIVAMTTKFSRPFYEYQFKLDNDQHKVALVFGSETDGLPEEVRADIGANHWLRLPMLPDSRSLNLANSVGICLYEVWRQLGFVGDIGQSVGYHKPTSR*	mmseqs_cdd	nonviral_gene	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0013	persistent	direct	high	545	0.998	GCA_009379425.1_00847
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	117588	117803	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	15622	15837	GCA_009379425_1_8_105	GCA_009379425_1_8_105	-	318622	.	.	hypothetical protein	MTDSTTSPARQKATNTYRQKALANIALVISHTEPHVLDALNQIMAHKDCSKAMAIKVALVEYANTLSQTSH*	.	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0014	shell	direct	high	215	0.995	GCA_009379425.1_00848
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	118206	118496	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	16240	16530	GCA_009379425_1_8_106	GCA_009379425_1_8_106	-	318622	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MALECLDVHFSGLVADGEEIPLPTNFDAHTQNSQFDGMMWAWVAVDLSKYDVKSHKINITLPNHLIAKIDEKVAAHKSLYKSRSNYLAQLAMADLA*	mmseqs_cdd	nonviral_gene	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0015	shell	direct	high	290	0.997	GCA_009379425.1_00849
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	118821	119018	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	16855	17052	GCA_009379425_1_8_107	GCA_009379425_1_8_107	-	318622	.	PFAM:PF16777.4	transcriptional-regulator	MPKIVANPKTRAQIQKDSDARRGVKPIGFKVPIEFAELLDELAKQSGKTKNIIIMEAVELWAKQL*	phrogs_hmm	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0016	persistent	direct	high	197	0.995	GCA_009379425.1_00850
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	119594	120031	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	17628	18065	GCA_009379425_1_8_108	GCA_009379425_1_8_108	+	318622	.	6AF2_A	HIT domain-containing protein	MFQLHPTLAKDTFLVGDFPLSTVRLMNDCQFPWLILVPRVSGIKEIYELSAADQVQFLRESSWVSSQMAKIFGADKMNVAALGNQVSQLHFHHIVRYQNDAAWPNPVWGHEAMPYTQEVLSHMQQTLMMALRGHHQMPFDWKMDV*	hhsuite_tools	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0017	persistent	direct	high	437	0.998	GCA_009379425.1_00851
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	120185	120847	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	18219	18881	GCA_009379425_1_8_109	GCA_009379425_1_8_109	+	318622	.	PRK00043	thiamine phosphate synthase. 	MTLQSIDKVPKLYLLTNDDELTTLLDKLERVFDTGAVSLLQVRRKSTLKLYDLATVYREAEMIVSLANDYDIKVVMNDSLELASHFGTGLHLGQRDGSVRVAREILGDHVVIGRTCHTDLALFKEAKREGATYGAMGTAFASITKPRAKIISKDILKKACELDFPLCVIGGITLENIHQLRDKLNGAAIDYIAVTADIMGHSVDTIADKCLAWQQKLNTW*	mmseqs_cdd	nonviral_gene	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0018	persistent	direct	high	662	0.998	GCA_009379425.1_00852
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	120852	124406	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	18886	22440	GCA_009379425_1_8_110	GCA_009379425_1_8_110	+	318622	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MIDTFKPKLDLPTKANFKTILPLLGGADLSFWLALAAKSEERLIVMIANHQNELNQLDTELSFFGIDAHVFPDWEILAYDQLSVHQDIISERIALLTRMPTTGVLLVSTQTLMQRIAPPSWLIGQHFDLAVGDKFDIHEQRLRLTKAGYVQTENVFEPGEFAVRGSIVDIFAVGQSLPFRLDLFDDNIETIKFFDPDSQRTLSDNDLAQLKKDAQAGMNTHHAQKLPSSAKITEFRLLPAREFPLEEGKEMFRQNFASLFPNASARKIEFYNDVMAAIAPQGIEFYAPLFFELDAWMKTGNLFSYLPDDTLVVSHDNLSACHDEYYQQIQARHHSRAHDKSLPIMPPDYLFLANNEFHQVLKAYPRVVINTNHDTAKIGVMESLPPPILPINHQAAKPLSELLSFIKSGQVPILLVAESAGRREIILELLKDKVAVKVVDNYQEFINNLDDFNTDCIALSVAPIERGLWLRDETGGLCIISETQIFGRQVLQTRRRRQSSVSQAFLIKSVTELTEGALVVHLEHGIGRYQGLVVLDVGEGEQEFIHLKYADDASIYVPITNLALIGRYSGSDLQTVSLSKIGSGKWEKAKLKALEQIHDVAAELLNVQARRNAKSGISFDIDMSQYELFASQFAFEETIDQAEAIHAVMHDMKQNKPMDRLICGDVGFGKTEVAMRAAFIAVQAGYQVAVLVPTTLLAGQHEDSFLNRFADWPIKIESLSRFGNKKHQDAILAGLADGTVDIVIGTHKLIQDDVKFKQLGLMIIDEEHRFGVRHKERIKALQTNIDSLSMTATPIPRTLNMALSGMQDISIIATPPARRLAIKTFLLPKSDETIKEAILREILRGGQVYYLHNDVASIEAAADTLRELVGEARVAVAHGQMNERELSVVMNDFYHKKFNVLVASTIIETGIDVPNANTIIIHRADKFGIAQLHQLRGRVGRSHHQAYCYLMVPSLKGLSSDAKKRLNAITRANTLGAGFMLASEDLEIRGAGEILGKEQSGNMQTIGFGLYMDMLERATNAIKQGKTPSLATPLDLVSDIDIHASALIPDEYLGDVHERLVFYKRISSLDDVNQLIDIRTEMIDRFGTLPTQTQNLFAVHRIRIRAKALGITKIDATQTTISIEFRADTPIDGLAIIKLIQSNDGYRMNGATAIRYTSQELMDTQARIDKVNELLLYFESTKTA*	common_virus_hmm	common_virus	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0019	persistent	direct	high	3554	1.0	GCA_009379425.1_00853
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	124403	124672	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	22437	22706	GCA_009379425_1_8_111	GCA_009379425_1_8_111	-	318622	.	.	hypothetical protein	MPMSIPTKATVGYTQRRLFMVSMTVGLISLSGCQHIQVTKSPIPIIIHSHTKSPSQPKPTPTDAVPTKNRPISPPTQKSNTIFILEDWF*	.	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0020	persistent	ambiguous	low	5	0.019	GCA_009379425.1_00853
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	124672	125934	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	22706	23968	GCA_009379425_1_8_112	GCA_009379425_1_8_112	-	318622	.	TIGR02800	tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MKSPITKVCLALTISFSAALTHTYADDELIVISEQVAPSQYPVAVMPFSEAHQMSHYLSLAGLGTTHQNLPQHTQTNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEIIDTANGLVSVKHTQISDNHPASIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNKISSLKLIDPSGQLIRTLDTVNGSIITPTFSPDGLSIAYSVQTKNNLPIIYIVSVSGGTPKLVTPFWGHNLAPSFSPDGGSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPNYLADASGFIYTADKGTRRQSLYRYDFGTTHSTQIASYATNPRLSPDGSKLVYLSGGQIIIANTKGRIQQSFRVLGTDVSASFSPSGTRIIYTSNQGNKNQLMIRSLSSNAIRTIPTSGTVRDPIWSK*	mmseqs_cdd	nonviral_gene	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0021	persistent	direct	high	1262	0.999	GCA_009379425.1_00854
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	125951	126751	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	23985	24785	GCA_009379425_1_8_113	GCA_009379425_1_8_113	-	318622	.	4G7X_B	Putative uncharacterized protein, TolA protein	MRLSDNHPTVNFDKSALILPILASVLLHTVIIIAVAAPLITPPTKPNTTIQTALVGQEAFNRAKTALSNHHANQNKPTATNTSSTITANDNDNAFMQAQNQHRYHPQVSTSATTTQAYHPPPNSAPFESNSPNIQNQPTNAHAKLAEYSNHVSDLEQSNHTESTPSRAQINAAITSVKHRIEAIWQHYPKQPNQTITFQVNMNQQGDVTSIQFGGGHPDLRESVEAAVYAAAPFYELGGMRDSIRLQFTTEQLIMDNNQTTNEPNH*	hhsuite_tools	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0022	persistent	direct	high	800	0.999	GCA_009379425.1_00855
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	126782	127216	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	24816	25250	GCA_009379425_1_8_114	GCA_009379425_1_8_114	-	318622	.	TIGR02801	TolR protein. The model describes the inner membrane protein TolR, part of the TolR/TolQ complex that transduces energy from the proton-motive force, through TolA, to an outer membrane complex made up of TolB and Pal (peptidoglycan-associated lipoprotein). The complex is required to maintain outer membrane integrity, and defects may cause a defect in the import of some organic compounds in addition to the resulting morphologic. While several gene pairs homologous to talR and tolQ may be found in a single genome, but the scope of this model is set to favor finding only bone fide TolR, supported by operon structure as well as by score. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MVTSNRFARRQRPLNSDMNVVPYIDVMLVLLVIFIVTAPMLATGIEVSLPKEQTKPITQADKLPVIVSIQADGNLYVSHKNAIDVPITPDKLDTLLRQMHQDNTDLQVMVNADADNAYSRIMQIMALIQNVGITQVSLLSESVQ*	mmseqs_cdd	nonviral_gene	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0023	persistent	direct	high	434	0.998	GCA_009379425.1_00856
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	127242	127931	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	25276	25965	GCA_009379425_1_8_115	GCA_009379425_1_8_115	-	318622	.	TIGR02796	TolQ protein. TolQ is one of the essential components of the Tol-Pal system. Together with TolR, it harnesses protonmotive force to energize TolA, which spans the periplasm to reach the complex of TolB and Pal at the outer member. The tol-pal system proves to be important for maintaining outer membrane integrity. Gene pairs similar to the TolQ and TolR gene pair often number several per genome, but this model describes specificially TolQ per se, as found in tol-pal operons. A close homolog, excluded from this model, is ExbB of the ExbB/ExbD/TonB protein complex, which powers transport of siderophores and vitamin B12 across the bacterial outer membrane. The Tol-Pal system is exploited by colicin and filamentous phage DNA to enter the cell. It is also implicated in pathogenesis in several bacterial species [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MNESISLISLVIEASVVVKLVMAILLLLSTISWVLIFHLGTKIGGIAKFDKRFERWFWTDDIDHQLSVVQAESERAGLELIFYTGFYDQNHQDQDSSLSDDKKVQIVERRLRMALGSEQVHLEKGLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQAESVGLATVAPSIAEALIATALGLFAAIPATMAYNHFATKSNTLYENRSLFCEGLISALVTNLAKKNTASTL*	mmseqs_cdd	nonviral_gene	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0024	persistent	direct	high	689	0.999	GCA_009379425.1_00857
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	128208	132380	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	26242	30414	GCA_009379425_1_8_116	GCA_009379425_1_8_116	+	318622	.	PDB:5XDR_A	Replicative-polyprotein	MHSTDNLPVLAKDRHYLNKLKQKMNSTTGDLKTKCKIRYDAIYERSAEQVANRMDSIPKNLSEKLNHDLPVTAEADTLIQAIRDHQVVIIAGETGSGKTTQLPKLAMMAGRGITGQIGHTQPRRLAARSVAMRIAEELGEPLGQTVSFKIRFTEEGGKHSIVKLMTDGILLAELGSDKFLANYDTIIIDEAHERSLNIDFIMGYLKRLLPKRPDLKVIITSATLDTQRFSDYFAANGKPAPVYIVEGRSYPVEVRYHPLTDTIVSSQDDDAFDDIEDNLPRALTAAVNECFEDARTKGHPDQADILIFAATEAEIRELQEVLMLYAPAHTEILPLFARQSYGEQQKIFAPSGKGRRIIIATNVAETALTVPNIRYVIDLGFARISRYNYRSRIQRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFNSRPEFTEPEILRTNLASVILQMERLQLGDVNAFDFITPPDLRLVNDGRKLLIELGALDDKSFTKTRAKKGRTQLSSLTKIGQQMAKMPIDPRLARMLVAGDAFDCLADILIIVSALAVQDVRERPINKHAQADQKHALFRKEDSDFLFYLELFAALFDRHSTNDNQALSSNARRNFAKKHYLSYARIREWQKTHRQLSEMMAEMGFEINKQKNHQNDVKIDTKKGVRLSLKSGTSHQKSIKQALVGAKALKNDIDNKTSIHYANIHRALLSALLSFVAHKTDTVGEYLMARSQKARIFPASTLHKKGAQWVMAFEVVETSQVYMRTLAKIEPEWIIKAAPNLLKYHYFEPHWSKKAGRVRAYAQISLFGLIVIAKELVNFEQIDLVQAREIFIRDALVANQYGMQMKFLADNANKIKDIERIEDKLRRRDLLVDEESLYQFYDAKIPNHIASRKSFEEFYHDAENKTPNFLHFSDEDVLNEAVDDSREFPESWHLGGVRLPLSYVFDPAADNDGVTVHVPIKALAQVDPVTLLWGISGWRYELVLQLLKTLPKEIRRQIVPIPDTCQKIFHQLDASSKMGLLDQLVAALKTLGVQAHAQDFAPDKVEDYLRPLICVVDDKNRVIEKSRDLPKLQARHRKTSVQSIAIEQGVHHHFPNHFNFVKNKHTSGIVMQEFSALKADAAQSAVFIATFTEMNAALAEHKKGVLTLIKGHLGAKQKQLTGQIDKAFKLAFAPLGDLEKLKNIVVHATLEACLYDYGPDFDHKPVSQHGDHARAAIAGLITQNNQWLISHLPLDEREFDDCQDLILKNFLLVGQEILRNLKEIYTAWQTARGKLLMLDQEIFGENIEDIEDQLDDLQLANFVYQTDYRHWRQYPRYLQALNIRLDRLQHNLEADLDAVYLLDTHMERLARCVKNPKFAEYRWLVEEYRINLFAQPMKTVQPVSAKRLETLWANLTTQ*	common_virus_hmm	common_virus	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0025	persistent	direct	high	4172	1.0	GCA_009379425.1_00858
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	132642	134138	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	30676	32172	GCA_009379425_1_8_117	GCA_009379425_1_8_117	+	318622	.	5NSW_C	Multidrug efflux outer membrane protein	MSIKCQLVAIDNIIKPCYDKILNFVYFSTMKMPYFLLLGLLLAQQADADYSLLDAQKQLMSSSSAIQASHALYQADVLQAESLQKLHYPRISLNAHAFVLQQNSSIPLDHIKEQTAQHINTHFDHRFGSAPDGLLDALHDSTQTALDRLPDHQDVKLRHDGITPNITATMPIYTGGLISSSKNIANLQAQRGKFGLQERISLAKLNLIRHYFNVQLQKQLTDTQQNMLSAMQLHVDNAYKLEQQGFISRGQRMQFEVARNQVQRLYQSTQNQHQNSIYELAVLLGLPHIEPLSTPLFINTQHRPNWQALLKDSQNTPLNQKLKTDTQLADENIALRQSTKKPKIAAVARYTLDDKPDWFAGVAVSYNLFLGIDRDKQIEAAHLQKQAAQLGHEQVNEHITTTMHTAYGEMVLAQKTHALLQQNRQAAKENLRIQTLSFQEGFGTVAGVVDAQSALSQIDSETALNAHRYLLALATLLHHTGTIDDFDDYLSLDDAHKL*	hhsuite_tools	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0026	persistent	direct	high	1496	0.999	GCA_009379425.1_00859
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	134185	135348	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	32219	33382	GCA_009379425_1_8_118	GCA_009379425_1_8_118	+	318622	.	COG1566	Multidrug resistance efflux pump [Defense mechanisms]. 	MTDKTDDVKPDTDGNHPKKQKPHTQAKSKPRPLALFLLLALIGSVLLVIIFGLIQSYGTPQNLPTANAIGSTNEPPKGVIAHLRQKITGPATFSIQGRVEGETVNISTKLPSRVAAIYVKEGQAVRAGEPLVQLISPEIDAKKQQAAAMLQSALAFQSSTDRGTRQENVDTLYANWQSAKAQATLAEESHRRGEYLYQEGVISRQRRDEMRAAKQSSAQIAQAAQQQYLKAQRGRTDELKSSADAQVQIARAAVAEADALDAETMLYAPIDGTVSKIYIQSSELVMPAVPVMSLLDNHPTITISVQENQYSHVHALPKLTGFIPALNKTADFKIVHTDDEGEFATIKNTRQTGGYDIHSFKTKLEPITPIEGLKVGMSVIFDITVLP*	mmseqs_cdd	nonviral_gene	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0027	persistent	direct	high	1163	0.999	GCA_009379425.1_00860
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	135376	136554	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	33410	34588	GCA_009379425_1_8_119	GCA_009379425_1_8_119	+	318622	.	PF12698.7	ABC-2 family transporter protein	MIVRFIRAFCQAFLRELNRLSCNRFDLAMAMIAPLVIIVLFGAMFYHGKAHHLPVALVDEDNSELSHLIYQHIHHNETIKTVLILDNVQDAHHAINRLDVGGYIHIPKDAQNHLVRGENTGIHIAYNQSFFSIGSAISSALSKSTKGGIAKFIQTKHLTGVLPHLPGNMPHVKISVLFNPNLSYEFFLEPFLVAAVLHLLLCCLVAHAIGQEFHENSVHEWLYHSPFGALFGKISVYVLIISLWHGLWQAWLIGVRGWFVAGSLFVLIIGQLLFYLAYALFGAMVVLKTQNINKSYGILAVYGGSSMSFAGVTLPLNNAPSFTQFWSQIIPFTPFARLQVEQWVIGSPFIITLAQLNSLLIFVLIFAIGSLLLLRRIKKTLIAMPNTPKDDS*	hhsuite_tools	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0028	persistent	direct	high	1178	0.999	GCA_009379425.1_00861
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	136554	137654	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	34588	35688	GCA_009379425_1_8_120	GCA_009379425_1_8_120	+	318622	.	COG0842	ABC-type multidrug transport system, permease component [Defense mechanisms]. 	MRRFIKQYLTIWLDVVKDRSIFLTMVLSVVFYGFFYPFAYQAQRPADLPIVIVDEEQSPLTQAIIHTTSHTPNIHVLAVVSDFRQAQMLVQSAKADGILLLPDNLSQSIHHGQTGGVGLYLSSAYFLRTQNIGAGLVSSLQATIIQELGQVTQTRHKPMPELIHQSALFNPLSGYGSYIFPAVAPIIVYQTIVLGLAMLVAGYRQRLWRASACDFLAIYAVALTIGCLSCFYLFGFVFWWHDYPRGGNFWGMMLGVPIFVSCAIGVALLIVSWVADGAKVGVLLIFSSVPLFMLTGLAYPLMAMPKFLQPLAHALPTTQGVQMFIQLNQMGVSIQDVWQKMAYLASVAVLCLGVAFWRLRLVNRSV*	mmseqs_cdd	nonviral_gene	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0029	persistent	direct	high	1100	0.999	GCA_009379425.1_00862
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	137979	138098	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	36013	36132	GCA_009379425_1_8_121	GCA_009379425_1_8_121	-	318622	.	PDB:2MXZ_A	L-alanyl-D-glutamate-peptidase-endolysin	MAQASGKLGVNVRWGGAWMVITGKAGTPQEWVKAYRAGG*	common_virus_hmm	common_virus	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0030	.	unmatched_CDS	none	0	0	.
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	138290	138703	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	36324	36737	GCA_009379425_1_8_122	GCA_009379425_1_8_122	+	318622	.	COG1598	Predicted nuclease of the RNAse H fold, HicB family [Defense mechanisms]. 	MHYPVTLTPDTDGFCVTFRDIPEAISQGDTTDEALDMAQDALMVAMEFYFEDNRAVPMPSQAQDGEHLVSLPPSVWVKVLLLNEMIAQNVSQAELAKRMGIVPQSLTRLVDLSHTTKIDTLANAFAKLGKQLQVGLT*	mmseqs_cdd	nonviral_gene	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0031	shell	direct	high	413	0.998	GCA_009379425.1_00863
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	138683	139474	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	36717	37508	GCA_009379425_1_8_123	GCA_009379425_1_8_123	-	318622	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MRLTKTIKEAIHAHAKICYPAECCGLIIDGQFYPCDNITPNPYEHFEIDPKDFARAESMGQIQAIVHSHPDGNAEPSEIDRVQMGVHGLDWVICAFGYHAGGKEYFDVKCHKPKAYQAPLLGREYHHGVQDCYSLVRDYYNRELDIHLPDFHRRDGWWGDENHEPLYEKNFAKAGFIKMQDETDLQKHDVILCRVGRTHHVNHALIYVGDGKLKSETTPDCVGNALILHHPHGSLSVREIYGKGWADRTAMVVRHQALSQTNL*	mmseqs_cdd	common_virus	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0032	shell	direct	high	791	0.999	GCA_009379425.1_00864
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	139588	139710	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	37622	37744	GCA_009379425_1_8_124	GCA_009379425_1_8_124	-	318622	.	.	hypothetical protein	MIVILSIAFPPYVTARLVLAQSTPLVLMKCIVLQYTNKVN*	.	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0033	shell	direct	high	122	0.992	GCA_009379425.1_00865
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	139857	140060	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	37891	38094	GCA_009379425_1_8_125	GCA_009379425_1_8_125	+	318622	.	.	hypothetical protein	MADKASPQARKKATANYFDKSLARIGLVISHTEPHVLDALNQIMAHKDCSKAMAIKIALVEYAKTLD*	.	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0034	shell	direct	high	203	0.995	GCA_009379425.1_00866
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	140057	140725	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	38091	38759	GCA_009379425_1_8_126	GCA_009379425_1_8_126	-	318622	.	PFAM:PF05100.11	minor-tail-protein-	MSFNTDIQQTTVQGFITLYELDARKLGGEIYRFHGHNDGVIRWQGQDFHPIAIKADGLEMRSDGRASTPKLSIGDKINGIQGAVSALCRLYDDFARAKLTVTHTLQAYLDSHDAQNYRQQEWYIEQKVSENPSLGIVEFELSNPVDFEGQKIPVRQITTYCNEAVCGRYRGEVCGYTGTARFTHDGKPTDDPTLDRCSGLLAHCKLRDNEGSFCGFPAAGLV*	hallmark_hmm	common_virus	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0035	shell	direct	high	668	0.999	GCA_009379425.1_00867
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	140868	141251	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	38902	39285	GCA_009379425_1_8_127	GCA_009379425_1_8_127	-	318622	.	.	hypothetical protein	MSETTLTELSRTEAQVLQSFIAQVDFWKNQHGDKAATIEVIYYPEDDGFEVANGEPNNGVLKRNRTTAFRADLLAWASNQLRQLQGWDNSQTVTEFSLSYKNDRYGVRAALASETTDKADDGAEQTQ*	.	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0036	persistent	direct	high	383	0.997	GCA_009379425.1_00868
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	141355	141687	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	39389	39721	GCA_009379425_1_8_128	GCA_009379425_1_8_128	-	318622	.	PFAM:PF05939.12	minor-tail-protein	MKTFTWDISADSSETTALNTTITAFGDGYEQAVSFGINNSRKSWQCSKTDTKAVIDEILSFLLNTKGVEPFTFVPIKGEPAIKVRLDGEISRQKTGGDVWQIGFTLKQVF*	hallmark_hmm	common_virus	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0037	shell	direct	high	332	0.997	GCA_009379425.1_00869
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	141790	143028	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	39824	41062	GCA_009379425_1_8_129	GCA_009379425_1_8_129	-	318622	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MDLFEQVKKTSQELIDATNRHEATQEFESTLKDIKKQMAIMGSQEPLAEFLYDLQNAEKYAYYTTEQLATLKDEMIKLQNAKDAKQASDGIEESLKDINKQLALLGSNHPLDDFFYELEQTDKYAHATTDEINELTDAIFKLQAAKDTLNAKQAFDTLMKDTALANETPAQRLQREYDEKMAVIDRYEQMHSDKLENATSLRQQITERYEQAEKDAKVKNYQEHLTAFAGFLKNTAGEQSKAYRVMFAASKAYALADVGVKMGKAVADAWADPSAVTIWQKLANVAKVSLEQGHVLSMINAISPKGFATGGYTGNMGINQVAGVVHGQEYVLNAKATKRIGVSNLERLNRGDGIGGHVNHINVHVTVNSDGSNVQADTQMGKTMGEAMAKIARQVVIQESKQNGHLDRLYRR*	hallmark_hmm	common_virus	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0038	shell	direct	high	1238	0.999	GCA_009379425.1_00870
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	143062	145677	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	41096	43711	GCA_009379425_1_8_130	GCA_009379425_1_8_130	-	318622	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MGGFLLGEFMLNTYRLDIQVNADSANTALGNLKEHFDKIEQSSGKASVGIDGFSDKADKASKSSKKAGDEAKKAGDGAKKFGDDAKKAGNDIDDLKHKADGLKTAFGTLKGVMFTALAVAGVGGIIATADDMQTLTSQIKIATTSTKDYAHAMSEIERIAMGNMVSLDSVGQLYASNERSLKQLGKSQDEVIKFTENITTAMRVSGGSAESQAAALTQLGQAMASGVLRGDEFNSIAEQAPVIMELMADSLGVTTGKLRDMAKQGKLTSKVVYDAIAGASASDKLAEKSKKMSTTISGAMQNIQTQWRLGVDAIMNGEGGLSSVLADGINSIALGASSFVDSLPAINQAITDTIAKAKEMGTAFLESDFGQSAIQTAKDAFEQLKSAMQGVVDIAGDVKAFFEKNPELAIALASGVGAVAGAFLLFKGVLIVWAGVATLATVAGGALAAVMAVLTSPITLVIAAFAALVAAGVYVYRNWDTIKQKANDAWNSIKETWQGVGEWFGELWGKVKQTFFNWLSQMPKPVQDMVANIGEIFSTIVDVAGAVWDGIANIAKSVWHAITKFVSYAIDKIKPVIKSVLEFFKNAWDGLVGIAKTVWQAVVSVVSHVFDKISGIISTQFEAMKAIFMAGVTIFASIFNAGFEMVKNIFSTAFKVIKAVLTGDMQGVKDAIKDGFQKAVDILKKLVGNIVDALKKLGKDLLQVGRDAMQGFINGISEKIDAAVSKAKEMASSVKNAVTGFFDIHSPSRVMKQVGGWISEGLAIGIAYKAPIAAKEAKNLAKSVKNDLESELQKTAEEIFLTKQHIAGNPYAQLTKDIAFGKYGKQDTSRLQKLAQEQILQSNILTLTQQLHEAQQNLANVGLTNIEIMQR*	hallmark_hmm	common_virus	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0039	shell	direct	high	2615	1.0	GCA_009379425.1_00871
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	145710	146546	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	43744	44580	GCA_009379425_1_8_131	GCA_009379425_1_8_131	-	318622	.	.	hypothetical protein	MAQELPTTESLFDFLYLDSIKIRSFYAQLTGFGSLASIKANNALNSSLASEGAFGVNAMAKIDAKVNYATGENQSSEKTYDATPTLPREMIDKLDELGFISRELGENSAGNLVLLNGVLSITDIETLQNLLEPTMYFATEEEYKQLYGDRKRQAVKKKLEENKPVVQLIKAIPYALEARLKVGEDMVWMTLNRGEMVGNPHDINLKHGKVLFGEYYVLGVLDAIPNDDMNIDMTTGSFGDVILELSQSLKETMGRNTSSYGITPIAIFRVIRTNQQVK*	.	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0040	shell	direct	high	836	0.999	GCA_009379425.1_00872
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	146509	146691	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	44543	44725	GCA_009379425_1_8_132	GCA_009379425_1_8_132	-	318622	.	.	hypothetical protein	MQDNAKKSDATHHSAQLLRDMFSCLNQAMSRETEKFHQEQKKVKEEINRGARITNHRISL*	.	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0041	shell	direct	high	182	0.995	GCA_009379425.1_00873
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	146824	147036	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	44858	45070	GCA_009379425_1_8_133	GCA_009379425_1_8_133	-	318622	.	.	hypothetical protein	MIKPDAKEQGEFQITCHQATNQAMNYLHGLHAEIKRLGGVAPSLDIDEDEIARAIITRMVQGKRFMVNLD*	.	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0042	shell	direct	high	212	0.995	GCA_009379425.1_00874
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	147481	147942	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	45515	45976	GCA_009379425_1_8_134	GCA_009379425_1_8_134	-	318622	.	.	hypothetical protein	MAFDLTLLKKDAKMSAKREIEFDGLELTLEIQASEAFKRAAAEVQKIANTPKKVTKDSLKRGNQDEIGEYEAMLFILGEYCISQWNVTADGEPLAINGDNFLILLDQGFEKDKLTQFITLLFETYASLSQEFEDNKAKLVKKSTTATNGKKSG*	.	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0043	shell	direct	high	461	0.998	GCA_009379425.1_00875
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	147993	148139	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	46027	46173	GCA_009379425_1_8_135	GCA_009379425_1_8_135	-	318622	.	.	hypothetical protein	MEYITIIVDFMKYLIEKHGLFVIWLMVASLITLYKLDMILTAVHLFFN*	.	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0044	shell	direct	high	146	0.993	GCA_009379425.1_00876
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	148223	149131	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	46257	47165	GCA_009379425_1_8_136	GCA_009379425_1_8_136	-	318622	.	PDB:5NGJ_B	Tail-tube-protein	MSSGAFVKTAYAKQTGETLPKTGWKTLPNISNGLTVATELTNSEMLSGSRMAKAGMVTSASVQGDIETELMFGAYDELIAAAFWSEWSAGASPNTLSVGATKHQFAIAKDFSDINVNHVFTGCVVSSFGLTIDTSSLIKLKFGMTGLGYQESKTESFAKTPTAQADTAKASGLSIGEIKVNGTKLDVCVESFSFELDNQTEVQKCLGDNIYGGNILAMLTNITGSMTIAYSQKAHEMISNQMTGTTLSLELPIKFGNSKYVIKIPKFQVSGEIPSPSGTDLVTVDLSYTVVDESPVIEKHTA*	hallmark_hmm	common_virus	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0045	shell	direct	high	908	0.999	GCA_009379425.1_00877
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	149135	149323	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	47169	47357	GCA_009379425_1_8_137	GCA_009379425_1_8_137	-	318622	.	.	hypothetical protein	MPKNRHRRLLQLYGEINELGAILDAPKPKDIHPHEWILMKDQLYYMRQYYRVLKQRTDDTEN*	.	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0046	shell	direct	high	188	0.995	GCA_009379425.1_00878
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	149323	149706	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	47357	47740	GCA_009379425_1_8_138	GCA_009379425_1_8_138	-	318622	.	PDB:2L25_A	tail-completion-protein	MDTAHIEQTLLTHIKSWEHFDDVPLAKENRNFKPPDGIWGRVTILGGVNQVRSISNTPNILQQGTLVIQLFCPQDLGTVAIKQKADSLANHLQTRRFGRLELLAPSIINAGFHDCYQINVSVAWRYY*	hallmark_hmm	common_virus	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0047	shell	direct	high	383	0.997	GCA_009379425.1_00879
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	149804	150151	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	47838	48185	GCA_009379425_1_8_139	GCA_009379425_1_8_139	-	318622	.	PFAM:PF04883.11	tail-component	MGIKWNKKLSIEPIADKIDATYRKFAIDCYNNVIALSPVRKGRYKNAHHISIGSPSYAETGGGIELILGIPKHTYPLIYIQNNLPYALRLEHGWSQQAPTGVYGNAFNSALGNLS*	hallmark_hmm	common_virus	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0048	persistent	direct	high	347	0.997	GCA_009379425.1_00880
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	150151	150507	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	48185	48541	GCA_009379425_1_8_140	GCA_009379425_1_8_140	-	318622	.	PFAM:PF12206.7	head-closure-Hc1	MGLNAEISTEITQAFDTDLKDAVKDFTGRRVILSDDDWAVNDTQVLSTINYSGRGVFTGFYAHEIDNKTIMQSDVKLICLQDELTEIPQIDDEINEMKIISISHDPAEVSFTIQLRGF*	phrogs_hmm	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0049	persistent	direct	high	356	0.997	GCA_009379425.1_00881
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	150509	150868	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	48543	48902	GCA_009379425_1_8_141	GCA_009379425_1_8_141	-	318622	.	CDD:cd08053	Head-Tail-Connector-Protein	MITLDDLTDIDKADEQTVVIVNAWLNKHKIRAFDKTPDPIRQAGRYIAKAWLDGDLFATRTEGQVISKSSKAGDVSVSKTYADGQMGQAMSQNEQIALALIEPYLQQPLGMFGLPLVRV*	hallmark_hmm	common_virus	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0050	shell	direct	high	359	0.997	GCA_009379425.1_00882
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	150929	151132	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	48963	49166	GCA_009379425_1_8_142	GCA_009379425_1_8_142	-	318622	.	.	hypothetical protein	MSLPKDKVKPAFNFTYPSERAYFDESKSTLANAQVTDPAKSGADYGIKDPQVTEALTGTKSETAKVE*	.	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0051	shell	direct	high	203	0.995	GCA_009379425.1_00883
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	151143	152159	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	49177	50193	GCA_009379425_1_8_143	GCA_009379425_1_8_143	-	318622	.	PDB:6R3A_A	Major-Capsid-Protein	MAKLREIFNKNVTLSYQVKDNLQRSKFWQSGAFVSDARLRPLLNSGSLTFDVPFIHPIDGNLEANYSNTIMTDIAMPRSIEGSKSKGRLALLNEGFIESRLESYLLGQSPLKLMAQMIDDYWLTQAENRAIATLFGLLNYDQSNGKKLSTDISKATADDSSGFDVHAFIDAEGSLDEMHQGSGLMIVHPLIATKMRKQRLLERVTTADDLKPIDMYNGRRLIQSKRATVIGTGKNAKYVSYLLGAGAFAADMVAGHDDLELERTANTGNGSGHTTLWTRRNMLIHPQGFSFIGEPSTLTGGTKNEALSPSWTDLTTAANWRLDADADATPIRFLITNL*	hallmark_hmm	common_virus	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0052	shell	direct	high	1016	0.999	GCA_009379425.1_00884
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	152162	152800	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	50196	50834	GCA_009379425_1_8_144	GCA_009379425_1_8_144	-	318622	.	PFAM:PF06810.10	minor-structural-protein-	MSEENQTTVLSDDTQNQITQEQYNKLQAEVERLRKHSETLLAEKKQQSEQRKAEQAEKERLAEETARKKGDFEALEKQYQAKIQELNEQIAKRDKERDENLVKSHAQKLSSQLSDNPANQEILQILIEKRLSAKDGQLSVLDDSGAVSIMTLDDLAKQMQNCGKYDSLIIGTKSCGTGSNGQSAKRAGDYSEQERLALAHSNPALFNQLFLE*	hallmark_hmm	common_virus	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0053	shell	direct	high	638	0.998	GCA_009379425.1_00885
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	152852	153856	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	50886	51890	GCA_009379425_1_8_145	GCA_009379425_1_8_145	-	318622	.	PFAM:PF06152.10	minor-capsid-protein	MKHLINLERFKVHLANKFKTTLNEIDEFLQLVVFRHEISELNYKEFELLIGESKQKLLGFLAGYALELTQDWQELYDYSYTLETKMIDDDKPDTLNMNEPQFDADSPIKLSAQVGVTLNQILAKFGDEQSTKISNAISYAYANGLPNQELVRIIRGTRKNRYQDGILQITTRHAKTIAHTGTAIVANQAKQQFIHDNKDIIKGIKVIATLDLRTSGICRHLDGEIMPIDKAVYPPYHYNCRTSFEIVYDGYQTPKQRASMDGVVKNQTYYEWLKNQPAQYQDEVLGKTRAKLFRDGGMTVERFRALQLDKYFTPLTLEQMRALEPKAFKKASIH*	hallmark_hmm	common_virus	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0054	shell	direct	high	1004	0.999	GCA_009379425.1_00886
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	154159	154527	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	52193	52561	GCA_009379425_1_8_146	GCA_009379425_1_8_146	-	318622	.	.	hypothetical protein	MNEFIIPNSNSVSNDFNYSRTDLDAQEQQIAEFIKKGGKVINLDNSEQPKKKSAKKRDFNNQRINSKMHLVLCYLKRSGKRMTGLQIQEKFGISATTLGSQTRLLNAQASKQYNQNSNPSRK*	.	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0055	shell	direct	high	368	0.997	GCA_009379425.1_00887
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	154926	155630	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	52960	53664	GCA_009379425_1_8_147	GCA_009379425_1_8_147	+	318622	.	PDB:2FJR_A	Repressor-protein-CI	MQDFSIRLNQAMSAKNLSLRDLSEKTGINYEMIRRYSKGQAKPRNDKMKLLAQCLGVPITWLDYGEGEMTKNNDKLTPITEWDDSTPLDDDEAEIPFYKDIAFACGHGAVNDDVTHETRKLRMGKRTLSNLGVMPENAFAVTARDDSMTPYVQDGDTIYIDKGRKEVKDGRIFAIRFGELCLCKRLYRLPDGGVRIVSDNAAEFPEQVATKQQISDGEFEVIGWVWSVSRLERW*	common_virus_hmm	common_virus	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0056	shell	direct	high	704	0.999	GCA_009379425.1_00888
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	155682	156587	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	53716	54621	GCA_009379425_1_8_148	GCA_009379425_1_8_148	+	318622	.	PF14337.6	Domain of unknown function (DUF4393)	MTAETFHLIPAITGAVSGAASVGLLNGPLQTLQDIWFVVYGHKWHYKVESIKAQQAMNIQAMQNNIQTGIEKIPANALKDPNVAIIGPALEASRFHMNEENIREMFANLIVSAMDERKDGQMHHAFVEIIKSLSPLDAKNLKYLNQDSAKNISPIANIIRQESNSYHMLYQHVFLGNPEVSDQDLIAPSIDNLSRLKLIDITYNDYLTDDSEYESFYHSAPYQEMTSALNKEHEALNLDISILQNPDLKIEFEGKILNKDERSEKLDQVMKGLESKIEIQKGVIKLTAFGKNFLSVCSPTT*	hhsuite_tools	nonviral_gene	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0057	shell	direct	high	905	0.999	GCA_009379425.1_00889
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	156616	156822	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	54650	54856	GCA_009379425_1_8_149	GCA_009379425_1_8_149	-	318622	.	.	hypothetical protein	MALAINIVLGANTVHFSRNIQKATQNAKKYLQGFALLAYMQAADKDKSVQDFLIIDPNPMTDEQKSLY*	.	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0058	shell	direct	high	206	0.995	GCA_009379425.1_00890
GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote	cenote	CDS	156885	157289	GCA_009379425.1	RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425.1_RCKK01000003.1	GCA_009379425.1|RCKK01000003.1	GCA_009379425_1_8	GCA_009379425_1_8@C7	54919	55323	GCA_009379425_1_8_150	GCA_009379425_1_8_150	-	318622	.	.	hypothetical protein	MMRLVMFGIKLLHSDDFIKSASSFGCFLAIMDKQTNKNHVYNLSTQVQRFELIDIDQVANLANSVQNGAISATVGTLLVRAGVLPALVALSIGAGLPNRTKDAYVCHIEFDDSKSAILLQLSKHKYQQFLKHIA*	.	hypothetical_protein	C7	55323	101967	157290	GCA_009379425.1|RCKK01000003.1@region_101968_157290@tool_cenote_CDS_0059	shell	direct	high	404	0.998	GCA_009379425.1_00891