core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	genomad_gene	genomad_length	genomad_strand	genomad_gc_content	genomad_genetic_code	genomad_rbs_motif	genomad_marker	genomad_evalue	genomad_bitscore	genomad_uscg	genomad_plasmid_hallmark	genomad_virus_hallmark	genomad_taxid	genomad_taxname	genomad_annotation_conjscan	genomad_annotation_amr	genomad_annotation_accessions	genomad_annotation_description	genomad_element_name_std	genomad_element_name_orig	genomad_element_gene_wrt_to_contig	genomad_element_gene_wrt_to_element	genomad_element_gene_start	genomad_element_gene_end	genomad_protein_translation	genomad_phage_region_id	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	238370	238783	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_216	414	1	0.469	11	GGA/GAG/AGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	216	1	1	414	MHYPVTLTPDTDGFCVTFRDIPEAISQGDTTDEALDMAQDALMVAMEFYFEDNRAVPMPSQAQDGEHLVSLPPSVWVKVLLLNEMIAQNVSQAELAKRMGIVPQSLTRLVDLSHTTKIDTLANAFAKLGKQLQVGLT	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0001	shell	direct	high	414	1.0	GCA_009379475.1_00965
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	238763	239557	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_217	795	-1	0.468	11	GGA/GAG/AGG	GENOMAD.168265.VP	2.214e-36	141	0	0	0	1246	Caudoviricetes	NA	NA	PF14464;COG1310;K21140;TIGR02256	Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	217	2	394	1188	MRLTKTIKEAIHAHAKICYPAECCGLIIDGQYYPCDNVAVNPTEHFEIDHLDMVEMQEYHGEIQAIVHSHPNGNAEPSEIDRVQMSIHGLDWVICAFGYHADGKEYFDVKRHKPKAYQAPLLGREYHHGVQDCYSLVRDYYSRELDIHLPDFHRRDGWWEDENHEPLYEKNFTKAGFIKMQDETDLQKHDVILCRVGRTHHVNHALIYVGDGKLKSETTPDCVGNALILHHPHGGLSVREIYGKGWADRTAMVVRHQALSQTNL	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0002	shell	direct	high	795	1.0	GCA_009379475.1_00966
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	239944	240147	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_218	204	1	0.426	11	AGGA	GENOMAD.170091.VV	1.515e-38	137	0	0	0	1	NA	NA	NA	NA	NA	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	218	3	1575	1778	MADKASPQARKKATANYFDKSLARIGLVISHTEPHVLDALNQIMAHKDCSKAMAIKIALVEYAKTLD	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0003	shell	direct	high	204	1.0	GCA_009379475.1_00967
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	240144	240812	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_219	669	-1	0.468	11	GGAG/GAGG	GENOMAD.108715.VP	3.333e-88	289	0	0	1	1246	Caudoviricetes	NA	NA	PF05100;COG4672;TIGR01600	Phage minor tail protein L	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	219	4	1775	2443	MSFNTDIQQTTVQGFITLYELDARKLGGEIYRFHGHNDGVIRWQGQDFHPIAIKADGLEMRSDGRASTPKLSIGDKINGIQGAVSALCRLYDDFARAKLTVTHTLQAYLDSHDAQNYRQQEWYIEQKVSENPSLGIVEFELSNPVDFEGQKIPVRQITTYCNEAVCGRYRGEVCGYTGTARFTHDGKPTDDPTLDRCSGLLAHCKLRDNEGSFCGFPAAGLV	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0004	shell	direct	high	669	1.0	GCA_009379475.1_00968
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	240896	241285	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_220	390	-1	0.500	11	AGGAG	GENOMAD.123697.VV	4.624e-73	240	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	220	5	2527	2916	MSETTLTEVSRTEAQVLQSFIAQVDFWKNQHGDKAATIEVIYYPEDDGFEVANGEPNNGVLKRNRTTAFRADLLAWASNQLRQLQGWDNSQTVTEFSLSYKNDRYGVRAALASEATDKADDGDDAKNTD	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0005	persistent	direct	high	390	1.0	GCA_009379475.1_00969
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	241390	241722	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_221	333	-1	0.423	11	None	GENOMAD.023365.VV	1.125e-22	94	0	0	1	1246	Caudoviricetes	NA	NA	PF05939;COG4718	Phage-related protein	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	221	6	3021	3353	MKTFTWDISADSSETTALNTTITAFGDDYEQAVSFGINNSRKSWQCSKTDTKAVIDEIYRFLIDTKGVEPFNFKPLTDEPSIKVRLDGEISRQKTGGDVWQIGFTLKQVF	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0006	shell	direct	high	333	1.0	GCA_009379475.1_00970
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	241825	243063	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_222	1239	-1	0.440	11	GGA/GAG/AGG	GENOMAD.133885.VP	8.492e-08	57	0	0	0	5115	Vieuvirus	NA	NA	NA	NA	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	222	7	3456	4694	MDLFEQVKKTSQELIDATNRHEATQEFESTLKDIKKQMAIMGSQEPLAEFLYDLQNAEKYAYYTTEQLATLKDEMIKLQNAKDAKQASDGIEESLKDINKQLALLGSNHPLDDFFYELEQTDKYAHATTDEINELIDAIFKLQAAKDTLNAKQAFDTLMKDTALANETPAQRLQREYDEKMAVIDRYEQMHSDKLENATSLRQQITERYEQAEKDAKVKNYQEHLTAFAGFLKNTAGEQSKAYRVMFAASKAYALADVGVKMGKAVADAWADPSAVTIWQKLANVAKVSLEQGHVLSMINAISPKGFATGGYTGNMGINQVAGVVHGQEYVLNAKATKRIGVGNLERLNRGDGIGGHVNHINVHVTVNSDGSNVQADTQMGKTMGEAMAKIARQVVIQESKQNGHLDRLYRR	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0007	shell	direct	high	1239	1.0	GCA_009379475.1_00971
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	243097	244332	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_223	1236	-1	0.407	11	None	GENOMAD.121850.VP	3.116e-23	106	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	223	8	4728	5963	MIAAFAALVAAGVYVYRNWDTIKQKANDAWNSIKETWQGVGEWFGELWGKVKQTFFNWLSQMPKPVQDMVANIGEIFSTIVDVAGAVWDGIANIAKSVWHAITKFVSYAIDKIKPVIKSVLEFFKNAWDGLVGIAKTVWQAVVSVVSHVFDKISGIISTQFEAMKAIFMAGVTIFASIFNAGFEMVKNIFSTAFKVIKAVLTGDMQGVKDAIKDGFQKAVDILKKLVGNIVDALKKLGKDLLQVGRDAMQGFINGISEKIDAAVSKAKEMASSVKNAVTGFFDIHSPSRVMKQVGGWISEGLAIGIAYKAPIAAKEAKNLAKSVKNDLESELQKTAEEIFLTKQHIAGNPYAQLTKDIAFGKYGKQDTSRLQKLAQEQILQSNILTLTQQLHEAQQNLANVGLTNIEIMQR	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0008	shell	direct	high	1236	1.0	GCA_009379475.1_00972
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	244280	245692	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_224	1413	-1	0.454	11	None	GENOMAD.192027.VP	4.206e-43	168	0	0	1	1246	Caudoviricetes	NA	NA	COG5281	Phage-related minor tail protein	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	224	9	5911	7323	MGGFLLGEFMSNTYRLDIQVNADSANTALGNLKEHFDKIEQSSGKASVGIDGFSDKADKASKSSKKAGDGAKKFGDDAKKAGNDIDDLKHKADGLKTAFGTLKGVMFTALAVAGVGGIIATADDMQTLTSQIKIATTSTKDYAHAMSEIERIAMGNMVSLDSVGQLYASNERSLKQLGKSQDEVIKFTENITTAMRVSGGSAESQAAALTQLGQAMASGVLRGDEFNSIAEQAPVIMELMADSLGVTTGKLRDMAKQGKLTSKVVYDAIAGASASDKLAEKSKKMSTTISGAMQNIQTQWRLGVHAIMNGEGGLSSVLADGINSIALGASSFVDALPAINQAITDTIAKAKEMGTAFLESDFGQSAIQTAKDAFEQLKSAMQGVVDIAGDVKAFFEKNPELAIALASGVGAVAGAFLLFKGVLIVWAGVATLATVAGGCVGGGDGSTNQSDYACDCSFCCTGGGRCVCIP	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0009	shell	direct	high	1413	1.0	GCA_009379475.1_00973
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	245725	246561	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_225	837	-1	0.401	11	AGGAG	GENOMAD.146417.VV	4.153e-95	312	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	225	10	7356	8192	MAQELPTTESLFDFLYLDSIKIRSFYAQLTGFGSLASIKANNALNSSLASEGAFGVNAMAKIDAKVNYATGENQSSEKTYDATPTLPREMIDKLDELGFISRELGENSAGNLVLLNGVLSITDIETLQNLLEPTMYFATEEEYKQLYGDRKRQAVKKKLEENKPVVQLIKAIPYALEARLKVGEDMVWMTLNRGEMVGNPHDINLKHGKVLFGEYYVLGVLDAIPNDDMNIDMTTGSFGDVILELSQSLKETMGRNTSSYGITPIAIFRVIRTNQQVK	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0010	shell	direct	high	837	1.0	GCA_009379475.1_00974
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	246524	246706	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_226	183	-1	0.399	11	AGGAG	GENOMAD.184900.VV	6.161e-29	109	0	0	0	1	NA	NA	NA	NA	NA	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	226	11	8155	8337	MQDNAKKSDATHHSAQLLRDMFSCLNQAMSRETEKFHQEQKKVKEEINHGARITNHRISL	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0011	shell	direct	high	183	1.0	GCA_009379475.1_00975
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	246839	247051	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_227	213	-1	0.432	11	None	GENOMAD.227081.VP	8.638e-09	52	0	0	0	1	NA	NA	NA	PF09538;TIGR03826;COG4530	flagellar operon protein TIGR03826	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	227	12	8470	8682	MIKPDAKEQGEFQITCHQATNQAMNYLHGLHAEIKRLGGVAPSLDIDEDEIARAIITRMVQGKRFMVNLD	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0012	shell	direct	high	213	1.0	GCA_009379475.1_00976
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	247496	247957	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_228	462	-1	0.387	11	AGGA	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	228	13	9127	9588	MAFDLTLLKKDAKMSAKREIEFDGLELTLEIQASEAFKRAAAEVQKIANTPKKVTKDSLKRGNQDEIGEYEAMLFILGEYCISQWNVTADGEPLAINGDNFLILLDQGFEKDKLTQFITLLFETYASLSQEFEDNKAKLVKKSTTATNGKKSG	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0013	shell	direct	high	462	1.0	GCA_009379475.1_00977
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	248008	248154	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_229	147	-1	0.306	11	AGGA	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	229	14	9639	9785	MEYITIIVDFMKYLIEKHGLFVIWLMVASLITLYKLDMILTAVHLFFN	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0014	shell	direct	high	147	1.0	GCA_009379475.1_00978
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	248238	249146	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_230	909	-1	0.425	11	GGAG/GAGG	GENOMAD.039304.VV	7.519e-35	138	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	230	15	9869	10777	MSSGAFVKTAYAKQTGETLPKTGWKTLPNISNGLTVATELTNSEMLSGSRMAKAGMVTSASVQGDIETELMFGAYDELIAAAFWSEWSAGASPNTLSVGATKHQFAIAKDFSDINVNHVFTGCVVSSFGLTIDTSSLIKLKFGMTGLGYQESKTESFAKTPTAQADTAKASGLSIGEIKVNGTKLDVCVESFSFELDNQTEVQKCLGDNIYGGNILAMLTNITGSMTIAYSQKAHEMISNQMTGTTLSLELPIKFGNSKYVIKIPKFQVSGEIPSPSGTDLVTVDLSYTVVDESPVIEKHTA	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0015	shell	direct	high	909	1.0	GCA_009379475.1_00979
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	249150	249338	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_231	189	-1	0.392	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	231	16	10781	10969	MPKNRHRRLLQLYGEINELGAILDAPKPKDIHPHEWILMKDQLYYMRQYYRVLKQRTDDTEN	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0016	shell	direct	high	189	1.0	GCA_009379475.1_00980
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	249338	249721	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_232	384	-1	0.445	11	GGA/GAG/AGG	GENOMAD.071496.VV	4.253e-24	99	0	0	1	1246	Caudoviricetes	NA	NA	PF13554	Bacteriophage related domain of unknown function	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	232	17	10969	11352	MDTAHIEQTLLTHIKSWEHFDDVPLAKENRNFKPPDGIWGRVTILGGVNQVRSISNTPNILQQGTLVIQLFCPQDLGTVAIKQKADSLANHLQTRRFGRLELLAPSIINAGFHDCYQINVSVAWRYY	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0017	shell	direct	high	384	1.0	GCA_009379475.1_00981
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	249819	250166	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_233	348	-1	0.448	11	GGA/GAG/AGG	GENOMAD.030221.VV	4.629e-18	81	0	0	1	1246	Caudoviricetes	NA	NA	PF04883	Bacteriophage HK97-gp10, putative tail-component	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	233	18	11450	11797	MGIKWNKKLSIEPIADKIDATYRKFAIDCYNNVIALSPVRKGRYKNAHHISIGSPSYAETGGGIELILGIPKHTYPLIYIQNNLPYALRLEHGWSQQAPTGVYGNAFNSALGNLS	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0018	persistent	direct	high	348	1.0	GCA_009379475.1_00982
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	250166	250522	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_234	357	-1	0.401	11	GGA/GAG/AGG	GENOMAD.052368.VV	2.386e-34	128	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	234	19	11797	12153	MGLNAEISTEITQAFDTDLKDAVKDFTGRRVILSDDDWAVNDTQVLSTINYSGRGVFTGFYAHEIDNKTIMQSDVKLICLQDELTEIPQIDDEINEMKIISISHDPAEVSFTIQLRGF	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0019	persistent	direct	high	357	1.0	GCA_009379475.1_00983
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	250524	250883	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_235	360	-1	0.444	11	AGGA	GENOMAD.070899.VV	9.063e-21	89	0	0	0	1246	Caudoviricetes	NA	NA	PF20557	Putative DnaT-like ssDNA binding protein	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	235	20	12155	12514	MITLDDLTDIDKADEQTVVIVNAWLNKHKIRAFDKTPDPIRQAGRYIAKAWLDGDLFATRTEGQVISKSSKAGDVSVSKTYADGQMGQAMSQNEQIALALIEPYLQQPLGMFGLPLVRV	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0020	shell	direct	high	360	1.0	GCA_009379475.1_00984
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	250944	251147	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_236	204	-1	0.456	11	AGGAG	GENOMAD.135825.VV	3.174e-31	116	0	0	0	1	NA	NA	NA	NA	NA	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	236	21	12575	12778	MSLPKDKVKPAFNFTYPSERAYFDESKSTLANAQVTDPAKSGADYGIKDPQVTEALTGTKSETAKVE	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0021	shell	direct	high	204	1.0	GCA_009379475.1_00985
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	251158	252174	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_237	1017	-1	0.449	11	GGAG/GAGG	GENOMAD.089142.VV	2.112e-141	449	0	0	1	12133	Guernseyvirinae	NA	NA	PF20036;TIGR04387	Major capsid protein 13-like	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	237	22	12789	13805	MAKLREIFNKNVTLSYQVKDNLQRSKFWQSGAFVSDARLRPLLNSGSLTFDVPFIHPIDGNLEANYSNTIMTDIAMPRSIEGSKSKGRLALLNEGFIESRLESYLLGQSPLKLMAQMIDDYWLTQAENRAIATLFGLLNYDQSNGKKLSTDISKATADDSSGFDVHAFIDAEGSLDEMHQGSGLMIVHPLIATKMRKQRLLERVTTADDLKPIDMYNGRRLIQSKRATVIGTGKNAKYVSYLLGAGAFAADMVAGHDDLELERTANTGNGSGHTTLWTRRNMLIHPQGFSFIGEPSTLTGGTKNEALSPSWTDLTTAANWRLDADADATPIRFLITNL	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0022	shell	direct	high	1017	1.0	GCA_009379475.1_00986
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	252177	252815	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_238	639	-1	0.427	11	GGA/GAG/AGG	GENOMAD.024511.VV	2.922e-09	59	0	0	0	1246	Caudoviricetes	NA	NA	PF20356	NA	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	238	23	13808	14446	MSEENQTTVLSDDTQNQITQEQYNKLQAEVERLRKHSETLLAEKKQQSEQRKAEQAEKERLAEETARKKGDFEALEKQYQAKIQELNEQIAKRDKERDENLVKSHAQKLSSQLSDNPANQEILQILIEKRLSAKDGQLSVLDDSGAVSIMTLDDLAKQMQNCGKYDSLIIGTKSCGTGSNGQSAKRAGDYSEQERLALAHSNPALFNQLFLE	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0023	shell	direct	high	639	1.0	GCA_009379475.1_00987
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	252867	253871	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_239	1005	-1	0.399	11	GGA/GAG/AGG	GENOMAD.005262.VV	1.373e-42	162	0	0	1	1246	Caudoviricetes	NA	NA	PF06152;COG5585;TIGR01641	NAD+--asparagine ADP-ribosyltransferase	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	239	24	14498	15502	MKHLINLERFKVHLANKFKTTLNEIDEFLQLVVFRHEISELNYKEFELLIGESKQKLLGFLAGYALELTQDWQELYDYSYTLETKMIDDDKPDTLNMNEPQFDADSPIKLSAQVGVTLNQILAKFGDEQSTKISNAISYAYANGLPNQELVRIIRGTRKNRYQDGILQITTRHAKTIAHTGTAIVANQAKQQFIHDNKDIIKGIKVIATLDLRTSGICRHLDGEIMPIDKAVYPPYHYNCRTSFEIVYDGYQTPKQRASMDGVVKNQTYYEWLKNQPAQYQDEVLGKTRAKLFRDGGMTVERFRALQLDKYFTPLTLEQMRALEPKAFKKASIH	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0024	shell	direct	high	1005	1.0	GCA_009379475.1_00988
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	254174	254542	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_240	369	-1	0.358	11	AGGA	GENOMAD.161042.VV	3.225e-57	194	0	0	0	1	NA	NA	NA	NA	NA	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	240	25	15805	16173	MNEFIIPNSNSVSNDFNYSRTDLDAQEQQIAEFIKKGGKVINLDNSEQPKKKSAKKRDFNNQRINSKMHLVLCYLKRSGKRMTGLQIQEKFGISATTLGSQTRLLNAQASKQYNQNSNPSRK	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0025	shell	direct	high	369	1.0	GCA_009379475.1_00989
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	254941	255645	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_241	705	1	0.461	11	AGGAG	GENOMAD.079877.VV	9.119e-09	58	0	0	0	1246	Caudoviricetes	NA	NA	PF16452;TIGR02754	Bacteriophage CI repressor C-terminal domain	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	241	26	16572	17276	MQDFSIRLNQAMSAKNLSLRDLSEKTGINYEMIRRYSKGQAKPRNDKMKLLAQCLGVPITWLDYGEGEMTKNNDKLTPITEWDDSTPLDDDEAEIPFYKDIAFACGHGAVNDDVTHETRKLRMGKRTLSNLGVMPENAFAVTARDDSMTPYVQDGDTIYIDKGRKEVKDGRIFAIRFGELCLCKRLYRLPDGGVRIVSDNAAEFPEQVATKQQISDGEFEVIGWVWSVSRLERW	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0026	shell	direct	high	705	1.0	GCA_009379475.1_00990
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	255697	256602	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_242	906	1	0.386	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	242	27	17328	18233	MTAETFHLIPAITGAVSGAASVGLLNGPLQTLQDIWFVVYGHKWHYKVESIKAQQAMNIQAMQNNIQTGIEKIPANALKDPNVAIIGPALEASRFHMNEENIREMFANLIVSAMDERKDGQMHHAFVEIIKSLSPLDAKNLKYLNQDSAKNISPIANIIRQESNSYHMLYQHVFLGNPEVSDQDLIAPSIDNLSRLKLIDITYNDYLTDDSEYESFYHSAPYQEMTSALNKEHEALNLDISILQNPDLKIEFEGKILNKDERSEKLDQVMKGLESKIEIQKGVIKLTAFGKNFLSVCSPTT	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0027	shell	direct	high	906	1.0	GCA_009379475.1_00991
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	256631	256837	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_243	207	-1	0.430	11	AGGA	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	243	28	18262	18468	MALAINIVLGANTVHFSRNIQKATQNAKKYLQGFALLAYMQAADKDKSVQDFLIIDPNPMTDEQKSLY	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0028	shell	direct	high	207	1.0	GCA_009379475.1_00992
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	256900	257304	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_244	405	-1	0.407	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	244	29	18531	18935	MMRLVMFGIKLLHSDDFIKSASSFGCFLAIMDKQTNKNHVYNLSTQVQRFELIDIDQVANLANSVQNGAISATVGTLLVRAGVLPALVALSIGAGLPNRTKDAYVCHIEFDDSKSAILLQLSKHKYQQFLKHIA	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0029	shell	direct	high	405	1.0	GCA_009379475.1_00993
GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	genomad	CDS	257334	257441	GCA_009379475.1	RCKM01000003.1	GCA_009379475.1|RCKM01000003.1	GCA_009379475.1_RCKM01000003.1	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441_245	108	-1	0.435	11	None	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad	GCA_009379475.1|RCKM01000003.1	245	30	18965	19072	MTDKMREAYEAIKAEQALQRQSEALMCMFDRLEKA	GCA_009379475.1|RCKM01000003.1|provirus_238370_257441	GCA_009379475.1|RCKM01000003.1@region_238370_257441@tool_genomad_CDS_0030	.	unmatched_CDS	none	0	0	.