core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	1	969	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	2	970	GCA_009379585_1_12_1	GCA_009379585_1_12_1	+	211961	.	PDB:5EMI_A	Cell-wall-hydrolase-autolysin	TNPPTQKFPAGETLTAIARKYNLSLPAFAKENGLSVTDAASIGQTPTLPSDAKPANTTMANTPSSPSVNKPESYTVRAGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKRQPVSAQQTSQATQSTKNNQSTQSTATHRVQSGESLTAIARRYNISLHALAKENGLSVTDGVLIGQTLKLPSDAKAESSTPSRLGNTKNNSTRTPANTNIGITENYTVRSGDSLTMLSNRFGVAIGDLATANGLASNANLRIGQTLKVPKLTTTYTVKAGDGLIALARRYGISTQELAKMNNLEPTADLRIGQVLTVPNK*	common_virus_hmm	common_virus	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0001	shell	direct	moderate	794	0.819	GCA_009379585.1_00733
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	1126	2958	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	1127	2959	GCA_009379585_1_12_2	GCA_009379585_1_12_2	-	211961	.	COG1274	Phosphoenolpyruvate carboxykinase, GTP-dependent [Energy production and conversion]. 	MTAKITAPDFVRHQALIHWVAEIAALTKPAAIEWCDGSEEENQRLIDLMIKNGTMIKLDEDKHPNSYLAFSDPTDVARVEDRTYICSKEEIDAGATNNWVEPSQMRTKLNDLFDGCMAGRTMYVVPFSMGPLGSHIAHIGIEITDSPYVVVSMRKMARMGKEVYDVLGADGEYVPCVHTVGSPLTEGQKDVAWPCNDDKYIVHFPETREIWSYGSGYGGNALLGKKCLALRIASAMGREQGWLAEHMLILGVTNPQGKKHYIAAAFPSACGKTNFAMLIPPAGYEGWKVETVGDDIAWIKPSEDGKLYAINPEAGFFGVAPGTNTKTNSNCMSTLGSDVIYTNVAVTDDGEVWWEGKTKETPANLTNWKREPHTGAERAAHANARFTVSAKQCPSIDPQWENPEGVPISAFIFGGRRADTVPLVSEAFDWVDGVYKAATMGSETTAAATGQQGVVRRDPFAMLPFTGYNMADYFNHWLQMGENLGKKAKAAGNQLPKMFKVNWFRRDTNGDFVWPGFGQNMRVLQWIIERCEGTANAVRTPIGLVPTYDDINWDQSDFTKAQYELVTSQDKDAWIKELESHAELFDKLGERMPTALKAHNAKLKADIEQA*	mmseqs_cdd	nonviral_gene	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0002	persistent	direct	high	1832	0.999	GCA_009379585.1_00734
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	3279	4697	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	3280	4698	GCA_009379585_1_12_3	GCA_009379585_1_12_3	+	211961	.	PDB:3BH0_A	Helicase-ATPase	MAKAKSSYICQNCGAIYGKWAGQCTDCGEWNTLVEAPNTSLPHHHKSKTTTAPRKTANYAGAVSAVMTLDHVGVTLETRMPTGIGEFDRVLGGGLVAGSVVLIGGDPGIGKSTILLQTAINMAAGDSLSGSALYITGEESLSQVAMRAVRLGLPTDRLRVLAETNVDTICAALTTEQPAIAVIDSIQTLFTEAIQSAPGGVAQIRESAAVLTRYAKQTGTALFLVGHVTKEGALAGPRVLEHMVDTVLYFEGESDSRFRMIRAIKNRFGAVNELGIFGMTDTGLKEVANPSAIFLSRYDKPIAGSVVMVSREGTRPLLVEVQALVDDSQGQPRRMALGLDYQRLSMLLAVMHRHGGIHTSGMDVYVNVVGGVKVMETGSDLAVLIACASSIKEKPLPVRLCVFGEVGLSGEIRPVPNGQERLKEAMKHGFTHAIVPRANAPAANHPQFKNIQIIAVDRLDEAIYQAFEINAG*	rep_hall_hmm	common_virus	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0003	persistent	direct	high	1418	0.999	GCA_009379585.1_00735
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	4739	5458	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	4740	5459	GCA_009379585_1_12_4	GCA_009379585_1_12_4	-	211961	.	COG1118	ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]. 	MSIKIQNIHKTFGDFVALGEISIDISTGELTTLLGPSGCGKTTLLRIIAGLENADNGRIYFDSIDVTDIPVQHRGIGFVFQQYALFRHQTVAQNIAFGLTLLPRNTRPSANTIDRRVDELLDLVQLSHTKTRYPHELSGGQRQRVALARALATEPKLLLLDEPFGALDAKVRKSLRDSLKDIQREIGITSILVTHDQEEAQAISDKIVIMNHGQIEQIGTPSKLFAQPSSDFVVDFLGL*	mmseqs_cdd	nonviral_gene	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0004	persistent	direct	high	719	0.999	GCA_009379585.1_00736
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	5551	6390	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	5552	6391	GCA_009379585_1_12_5	GCA_009379585_1_12_5	-	211961	.	COG4208	ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]. 	MSHTSSYSYQKNPATRDKPWVRWSLIGIAVVFMGVMLVVPLVSVFYEALKEGWQAYQAALLEPDALASIKLTLITAAIILPINTIIGVALAYLITRHQFRGKFVITTLLDLPFAVSPVVAGLMFVLVFGANTRLGGYLESMGIQVIFATTGIVLATLFVTFAFIARELIPLMQAQGDSEEQAALTLGANGWQMFWKVTLPNIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTVPLMIEIAYNEYAFTLAFALSSLLALLALITLVAQGLMSHKK*	mmseqs_cdd	nonviral_gene	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0005	persistent	direct	high	839	0.999	GCA_009379585.1_00737
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	6435	7313	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	6436	7314	GCA_009379585_1_12_6	GCA_009379585_1_12_6	-	211961	.	TIGR02139	sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]	MLNQPIPLKNRARRVMPFFGLSMGISIFALGLLVILPFLMMILTTLQMSFDDIMQTIREPQVFAAIKLSLSMAMLATLTNLIFGTLAAWVLVRYEFWGKSFLNALVDLPFALPTAVTGIALATLYAPNGLFGQWFTHLGILLFNEPIKIAFTPIGIWLALVVVSFPFIVRAVQPVLAELSVEFEEAAAVMGAGRLTTFCRVILPEISPAMLIGAGMMFARATGEYGSVIFIAGNIPMQSEILPLIIVSKLEQFDVAGAACVSLFMLLISLVFLFTMNFIQWKLSARLGAKTN*	mmseqs_cdd	nonviral_gene	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0006	persistent	direct	high	878	0.999	GCA_009379585.1_00738
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	7663	8103	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	7664	8104	GCA_009379585_1_12_7	GCA_009379585_1_12_7	+	211961	.	.	hypothetical protein	MMMKNKWMRGLAILVLSLPTVTYAKTAAPKASEAPEVSLTQEEQMAIDFCDFSAYGVMHIAGDHQGGATKSEALTNHDKRMAELKDLIDLDPETATMLDKYWKGAIDRIFQESVQKTDAEKQAFVMGVGESSFYSCLDQVLKTPKN*	.	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0007	persistent	direct	high	440	0.998	GCA_009379585.1_00739
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	8133	9308	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	8134	9309	GCA_009379585_1_12_8	GCA_009379585_1_12_8	+	211961	.	PDB:1OYW_A	ATP-dependent-DNA-helicase	MTETTVKNFDDLPLSEPILKAVQALKFDQLTPIQAQILPHTLANQDAIGQAQTGTGKTATFLITIIESLLKRPFQADEIRYLGEPRALVLAPTRELAQQILADCRELTRFSQLYNLCITGGSDFDKQLEQLHKRPLDILIGTPGRIIDWVNKGELFLDRVEVFVLDEADRMLDMGFIPDIKRIVRHMPSNTERQSLLFSATFNQDVMNLAYRWLHQPAFVEIAPESKTNQAIDQQFYLVTEREKTSALKQILADDSVKKTIIFANRKDQVKRLYDYLRRHHKVTMLSGDVAQQKRERYLQRFKDGEVNVLVATDVAGRGIHVDDVTHVINYTLPDMPDDYVHRIGRTGRAGLSGVSISFVSENDAFNLPALERHIDQKFKLNQFEFLDEHK*	common_virus_hmm	common_virus	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0008	persistent	direct	high	1175	0.999	GCA_009379585.1_00740
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	9295	10497	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	9296	10498	GCA_009379585_1_12_9	GCA_009379585_1_12_9	+	211961	.	COG0635	Coproporphyrinogen III oxidase or related Fe-S oxidoreductase [Coenzyme transport and metabolism]. 	MSINKNHEHMYPDLLDPAHIPLSLYIHIPWCVKKCPYCDFNSHALPSQVPFENYIEALLSDAVSQQSLVSNRQIDTVFIGGGTPSLLPIESFKRLFDGLRLIYDFAPTCEITLEANPGTLEHSPFDEYLTIGINRLSIGVQSFDHNALTVLGRIHNPDQASNAIRAARIAGFDRVNADLMYGLPNQNPSKAVNDIQTAIDAGATHLSWYQLTIEPNTTFYCTPPQLPDEEIMAEIETLGQSVLTKHGFYNYEVSAWHGPNDAPCQHNLNYWQFGDYLAIGAGAHGKLTLKNHPDYQDGIYRYQKSRQPKDYLAFEDAPKMVNFERISDDNLPFEFMMNALRLKDGVSTDVFETRTGLLISTIDNEMLPLQHQGLMVLDPLRIAPTRLGFRYVNYLVSQFI*	mmseqs_cdd	nonviral_gene	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0009	persistent	direct	high	1202	0.999	GCA_009379585.1_00741
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	10579	10719	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	10580	10720	GCA_009379585_1_12_10	GCA_009379585_1_12_10	-	211961	.	COG5510	Predicted small secreted protein  [Function unknown]. 	MKKVLVASIAAVVVLTGCNAIKGFGKDVSKAGEAVSDTAQKVEKKI*	mmseqs_cdd	nonviral_gene	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0010	persistent	direct	high	140	0.993	GCA_009379585.1_00742
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	10967	11512	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	10968	11513	GCA_009379585_1_12_11	GCA_009379585_1_12_11	+	211961	.	COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ribosomal structure and biogenesis]. 	MSQFSDALIHIVLFSPKIPNNTGSIIRLCANTGAQLHLVKPLGFELDDTRLKRAGLDYHEYATLSVHDNWQETKSALKSLGVERIVAMTTKFSRPFYEYQFKLDNDQHKVALVFGSETDGLPEEVRADIGANHWLRLPMLPDSRSLNLANSVGICLYEVWRQLGFVGDIGQSVGYHKPTSR*	mmseqs_cdd	nonviral_gene	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0011	persistent	direct	high	545	0.998	GCA_009379585.1_00743
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	11628	11819	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	11629	11820	GCA_009379585_1_12_12	GCA_009379585_1_12_12	-	211961	.	.	hypothetical protein	MTDSTTSPARQKALANIALVISHTEPHVLDALNQIMAHKDCSKAMAIKVALVEYANTLSQTSR*	.	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0012	shell	direct	high	191	0.995	GCA_009379585.1_00744
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	12222	12626	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	12223	12627	GCA_009379585_1_12_13	GCA_009379585_1_12_13	-	211961	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MLYPIAILKGGDKTAHGIFFPDVPNLASACDELQDIHKMALECLDVHFSGLVADGEEIPLPTNFDAHTQNSQFDGMMWAWVDVDLSKYDVKSHKINITLPNHLIAKIDEKVAAHKSLYKSRSNYLAQLAMADLA*	mmseqs_cdd	nonviral_gene	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0013	shell	direct	high	404	0.998	GCA_009379585.1_00745
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	12838	13035	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	12839	13036	GCA_009379585_1_12_14	GCA_009379585_1_12_14	-	211961	.	PFAM:PF16777.4	transcriptional-regulator	MPKIVANPKTRAQIQKDSDARRGVKPIGFKVPIEFAELLDELAKQSGKTKNIIIMEAVELWAKQL*	phrogs_hmm	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0014	persistent	direct	high	197	0.995	GCA_009379585.1_00746
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	13613	14050	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	13614	14051	GCA_009379585_1_12_15	GCA_009379585_1_12_15	+	211961	.	6AF2_A	HIT domain-containing protein	MFQLHPTLAKDTFLVGDFPLSTVRLMNDCQFPWLILVPRVSGIKEIYELSAADQVQFLRESSWVSSQMAKIFGADKMNVAALGNQVLQLHFHHIVRYQNDAAWPNPVWGHEAMPYTQEVLSHMQQTLMMALRGHHQMPFDWKMDV*	hhsuite_tools	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0015	persistent	direct	high	437	0.998	GCA_009379585.1_00747
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	14204	14866	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	14205	14867	GCA_009379585_1_12_16	GCA_009379585_1_12_16	+	211961	.	PRK00043	thiamine phosphate synthase. 	MTLQSIDKVPKLYLLTNDDELTTLLDKLERVFDTGAVSLLQVRRKSTLKLYDLATVYREAEMIVSLANDYDIKVVMNDSLELASHFGTGLHLGQRDGSVRVAREILGDHVVIGRTCHTDLALFKEAKREGATYGAMGTAFASITKPRAKIISKDILKKACELDFPLCVIGGITLENIHQLRDKLNGAAIDYIAVTADIMGHSVDTIADKCLAWQQKLNTW*	mmseqs_cdd	nonviral_gene	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0016	persistent	direct	high	662	0.998	GCA_009379585.1_00748
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	14871	18425	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	14872	18426	GCA_009379585_1_12_17	GCA_009379585_1_12_17	+	211961	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MIDTFKPKLDLPTKANFKTTLPLLGGADLSFWLALAAKSEERLIVMIANHQNELNQLDTELSFFGIDAHVFPDWEILAYDQLSVHQDIISERIALLTRMPTTGVLLVSTQTLMQRIAPPSWLIGQHFDLAVGDKFDIHEQRLRLTKAGYVQTENVFEPGEFAVRGSIVDIFAVGQSLPFRLDLFDDNIETIKFFDPDSQRTLSDNDLAQLKKDAQAGMNTHHAQKLPSSAKITEFRLLPAREFPLEAGKEMFRQNFASLFPNASARKIEFYNDVMAAIAPQGIEFYAPLFFELDAWMKTGNLFSYLPDDTLVVSHDNLSACHDEYYQQIQARHHSRAHDKSLPIMPPDYLFLANNEFHQVLKAYPRVVINTNHDTAKIGAMESLPPPILPINHQAAKPLSELLSFIKSGQVPILLVAESAGRREIILELLKDKVAVKVVDNYQEFINNLDDFNTDCIALSVAPIERGLWLRDETGGLCIISETQIFGRQVLQTRRRRQSSVSQAFLIKSVTELTEGALVVHLEHGIGRYQGLVVLDVGEGEQEFIHLKYADDASIYVPITNLALIGRYSGSDLQTVSLSKIGSGKWEKAKLKALEQIHDVAAELLNVQARRNAKSGISFDIDMSQYELFASQFAFEETIDQAEAIHAVMHDMKQNKPMDRLICGDVGFGKTEVAMRAAFIAVQAGYQVAVLVPTTLLAGQHEDSFLNRFADWPIKIESLSRFGNKKHQDAILAGLADGTVDIVIGTHKLIQDDVKFKQLGLMIIDEEHRFGVRHKERIKALQTNIDSLSMTATPIPRTLNMALSGMQDISIIAIPPARRLAIKTFLLPKSDETIKEAILREILRGGQVYYLHNDVASIEAAADTLRELVGEARVAVAHGQMNERELSVVMNDFYHKKFNVLVASTIIETGIDVPNANTIIIHRADKFGIAQLHQLRGRVGRSHHQAYCYLMVPSLKGLSSDAKKRLNAITRANTLGAGFMLASEDLEIRGAGEILGKEQSGNMQTIGFGLYMDMLERATNAIKQGKTPSLATPLDLVSDIDIHASALIPDEYLGDVHERLVFYKRISSLDDVNQLIDIRTEMIDRFGTLPTQTQNLFAVHRIRIRAKALGITKIDATQTTISIEFRADTPIDGLAIIKLIQSNDGYRMNGATAIRYTSQELMDTQARIDKVNELLLYFESTKTA*	common_virus_hmm	common_virus	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0017	persistent	direct	high	3554	1.0	GCA_009379585.1_00749
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	18422	18691	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	18423	18692	GCA_009379585_1_12_18	GCA_009379585_1_12_18	-	211961	.	.	hypothetical protein	MPMSIPTKVTVGYTQRRLFMVSMTVGLISLSGCQHIQVTKSPIPIIIHSHTKSPSQPKPTPTDAVPTKNRPISPPTQKSNTIFILEDWF*	.	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0018	persistent	ambiguous	low	5	0.019	GCA_009379585.1_00749
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	18691	19953	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	18692	19954	GCA_009379585_1_12_19	GCA_009379585_1_12_19	-	211961	.	TIGR02800	tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MKSPITKVCLALTISFSAALTHTYADDELIVISEQVAPSQYPVAVMPFSEAHQMSHYLSLAGLGTTHQNLPQHTQTNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEIIDTANGLVSVKHTQISDNHPASIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNKISSLKLIDPSGQLIRTLDTVNGSIITPTFSPDGLSIAYSVQTKNNLPIIYIVSVSGGTPKLVTPFWGHNLAPSFSPDGGSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPNYLADASGFIYTADKGTRRQSLYRYDFGTTHSTQIASYATNPRLSPDGSKLVYLSGGQIIIANTKGRIQQSFRVLGTDVSASFSPSGTRIIYTSNQGNKNQLMIRSLSSNAIRTIPTSGTVRDPIWSK*	mmseqs_cdd	nonviral_gene	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0019	persistent	direct	high	1262	0.999	GCA_009379585.1_00750
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	19970	20770	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	19971	20771	GCA_009379585_1_12_20	GCA_009379585_1_12_20	-	211961	.	4G7X_B	Putative uncharacterized protein, TolA protein	MRLSDNHPTVNFDKSALILPILASVLLHTVIIIAVAAPLITPPTKPNTTIQTALVGQEAFNRAKTALSNHHANQNKPTATNTSSTITANDNDNAFMQAQNQHRYHPQVSTSATTTQAYHPPPNSAPFESNSPNIQNQPTNAHAKLAEYSNHVSDLEQSNHTESTPSRAQINAAITSVKHRIEAIWQRYPKQPNQTITFQVNMNQQGDVTSIQFGGGHPDLRESVEAAVYAAAPFYELGGMRDSIRLQFTTEQLIMDNNQTTNEPNH*	hhsuite_tools	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0020	persistent	direct	high	800	0.999	GCA_009379585.1_00751
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	20801	21235	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	20802	21236	GCA_009379585_1_12_21	GCA_009379585_1_12_21	-	211961	.	TIGR02801	TolR protein. The model describes the inner membrane protein TolR, part of the TolR/TolQ complex that transduces energy from the proton-motive force, through TolA, to an outer membrane complex made up of TolB and Pal (peptidoglycan-associated lipoprotein). The complex is required to maintain outer membrane integrity, and defects may cause a defect in the import of some organic compounds in addition to the resulting morphologic. While several gene pairs homologous to talR and tolQ may be found in a single genome, but the scope of this model is set to favor finding only bone fide TolR, supported by operon structure as well as by score. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MVTSNRFARRQRPLNSDMNVVPYIDVMLVLLVIFIVTAPMLATGIEVSLPKEQTKPITQADKLPVIVSIQADGNLYVSHKNAIDVPITPDKLDTLLRQMHQDNTDLQVMVNADADNAYSRIMQIMALIQNVGITQVSLLSESVQ*	mmseqs_cdd	nonviral_gene	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0021	persistent	direct	high	434	0.998	GCA_009379585.1_00752
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	21261	21950	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	21262	21951	GCA_009379585_1_12_22	GCA_009379585_1_12_22	-	211961	.	TIGR02796	TolQ protein. TolQ is one of the essential components of the Tol-Pal system. Together with TolR, it harnesses protonmotive force to energize TolA, which spans the periplasm to reach the complex of TolB and Pal at the outer member. The tol-pal system proves to be important for maintaining outer membrane integrity. Gene pairs similar to the TolQ and TolR gene pair often number several per genome, but this model describes specificially TolQ per se, as found in tol-pal operons. A close homolog, excluded from this model, is ExbB of the ExbB/ExbD/TonB protein complex, which powers transport of siderophores and vitamin B12 across the bacterial outer membrane. The Tol-Pal system is exploited by colicin and filamentous phage DNA to enter the cell. It is also implicated in pathogenesis in several bacterial species [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MNESISLISLVIEASVVVKLVMAILLLLSTISWVLIFHLGTKIGGIAKFDERFERWFWTDDIDHQLSVVQAESERAGLELIFYTGFYDQNHQDQDSSLSDDKKVQIVERRLRMALGSEQVHLEKGLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQAESVGLATVAPSIAEALIATALGLFAAIPATMAYNHFATKSNTLYENRSLFCEGLISALVTNLAKKNTASTL*	mmseqs_cdd	nonviral_gene	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0022	persistent	direct	high	689	0.999	GCA_009379585.1_00753
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	22227	26399	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	22228	26400	GCA_009379585_1_12_23	GCA_009379585_1_12_23	+	211961	.	PDB:5XDR_A	Replicative-polyprotein	MHSTDNLPVLAKDRHYLNKLKQKMNSTTGDLKTKCKIRYDAIYERSAEQVANRMDSIPKNLSEKLNHDLPVTAEADTLIQAIRDHQVVIIAGETGSGKTTQLPKLAMMAGRGITGQIGHTQPRRLAARSVAMRIAEELGEPLGQTVSFKIRFTEEGGKHSIVKLMTDGVLLAELGSDKFLANYDTIIIDEAHERSLNIDFIMGYLKRLLPKRPDLKVIITSATLDTQRFSDYFAANGKPAPVYIVEGRSYPVEVRYHPLTDTIVSSQDDDAFDDIEDNLPRALTAAVNECFEDARTKGHPDQADILIFAATEAEIRELQEVLMLYAPAHTEILPLFARQSYGEQQKIFAPSGKGRRIIIATNVAETALTVPNIRYVIDLGFARISRYNYRSRIQRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFNSRPEFTEPEILRTNLASVILQMERLQLGDVNAFDFITPPDLRLVNDGRKLLIELGALDDKSFTKTRAKKGRTQLSSLTKIGQQMAKMPIDPRLARMLVAGDTFDCLADILIIVSALAVQDVRERPINKHAQADQKHALFRKEDSDFLFYLELFAALFDQHSTNDNQALSSNARRNFAKKHYLSYARIREWQKTHRQLSEMMAEMGFEINKQKNHQNDVKIDTKKGVRLSLKSGTSHQKSIKQALVGAKALKNDIDNKTSIHYANIHRALLSALLSFVAHKTDTVGEYLMARSQKARIFPASTLHKKGAQWVMAFEVVETSQVYMRTLAKIEPEWIIKAAPNLLKYHYFEPHWSKKAGRVRAYAQISLFGLIVIAKELVNFEQIDLVQAREIFIRDALVANQYGMQMKFLADNANKIKDIERIEDKLRRRDLLVDEESLYQFYDAKIPNHIASRKSFEEFYHDAENKTPNFLHFSDEDVLNEAVDDSREFPESWHLGGLRLPLSYVFDPAADNDGVTVHVPIKALAQVDPVALLWGISGWRYELVLQLLKTLPKEIRRQIVPIPDTCQKIFHQLDASSKMGLLDQLVAALKTLGVQAHAQDFAPDKVEDYLRPLICVVDDKNRVIEKSRDLPKLQARHRKASVQSIAIEQGVHHHFPNHFNFVKNKHTSGIVMQEFSALKADAAQSAVFIATFTEINAALAEHKKGVLTLIKGHLGAKQKQLTGQIDKAFKLAFAPLGDLEKLKNIVVHATLEACLYDYGPDFDHKPVSQHVDHARAAIAGLITQNNQWLISHLPLDEREFDDCQDLILKNFLLVGQEILRNLKEIYTAWQTARGKLLMLDQEIFGENIEDIEDQLDDLQLANFVYQTDYRHWRQYPRYLQALNIRLDRLQHNLEADLDAVYLLDTHMERLARCVKNPKFAEYRWLVEEYRINLFAQPMKTVQPVSAKRLETLWANLTTQ*	common_virus_hmm	common_virus	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0023	persistent	direct	high	4172	1.0	GCA_009379585.1_00754
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	26588	28084	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	26589	28085	GCA_009379585_1_12_24	GCA_009379585_1_12_24	+	211961	.	6U94_A	RND efflux system, outer membrane	MSIKCQLVAIDNIIKPCYDKILNFVYFSTMKMPYFLLLGLLLAQQADADYSLLDAQKQLMSSSPAIQASHALYQADVLQAESLQKLHYPRISLNAHAFVLQQNSSIPLDHIKEQTAQHINTHFDHRFGSAPDGLLDALHNSTQTALDRLPDHQDVKLRHDGITPNITATMPIYTGGLISSSKNIANLQAQRGKFGLQERISLAKLNLIRHYFNVQLQKQLTDTQQNMLSAMQLHVDNAYKLEQQGFISRGQRMQFEVARNQVQRLYQSTQNQHQNSIYELAVLLGLPHIEPLSTPLFINTQHRPNWQALLKDSQNTPLNQKLKTDILLADENIALRQSTKKPKIAAVARYTLDDKPDWFAGVAVSYNLFLGIDRDKQIGAAHLQKQAAKLGHEQVNEHITTTMHTAYGEMVLAQKTHALLQQNHQAAKENLRIQTLSFQEGFGTVAGVVDAQSALSQIDSETALNAYRYLLALATLLHYTGTIDDFDDYLSLDDAHKL*	hhsuite_tools	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0024	persistent	direct	high	1496	0.999	GCA_009379585.1_00755
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	28131	29294	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	28132	29295	GCA_009379585_1_12_25	GCA_009379585_1_12_25	+	211961	.	COG1566	Multidrug resistance efflux pump [Defense mechanisms]. 	MTDKTDDVKPDTDGNHPKKQKPHTQAKSKPRPLALFLLLALIGSVLLVIIFGLIQSYGTPQNLPTANAIGSTNEPPKGVIAHIRQKIAGSATFSIQGRVEGETVNISTKLPSRVAAIYVKEGQAVRAGEPLVQLISPEIDAKKQQAAAMLQSALAFQSSTDRGTRQENVDTLYANWQSAKAQATLAEESYRRGEYLYQEGVISRQRRDEMRAAKQSSAQIAHAAQQQYLKAQRGRTDELKSSADAQVQIARAAVAEADALDAETMLYAPIDGTVSKIYIQSSELVMPAVPVMSLLDNHPTITISVQENQYSHVHALPKLTGFIPALNKTADFKIVHTDDEGEFATIKNTRQTGGYDIHSFKTKLEPITPIEGLKVGMSVIFDITVLP*	mmseqs_cdd	nonviral_gene	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0025	persistent	direct	high	1163	0.999	GCA_009379585.1_00756
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	29322	30500	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	29323	30501	GCA_009379585_1_12_26	GCA_009379585_1_12_26	+	211961	.	PF12698.7	ABC-2 family transporter protein	MIVRFIRAFCQAFLRELNRLSCNRFDLAMVMIAPLVIIVLFGAMFYHGKAHHLPVALVDEDNSELSHLIYQHIHHNETIKIVLILDNVQDAHHAINRLDVGGYIHIPKDAQNRLVRGENTGIHIAYNQSFFSIGSAISSALSKSTKGGIAKFIQTKHLTGVLPHLSGNMPHVKISVLFNPNLSYEFFLEPFLVAAVLHLLLCCLVAHAIGQEFHEHSVHEWLCHSPFGALFGKISVYVLIISLWHGLWQAWLIGVSGWFVAGSLFVLIIGQLLFYLAYALFGAMVVLKTQNINKSYGILAVYGGSSMSFAGVTLPLNNAPSFTQFWSQIIPFTPFARLQVEQWVIGSPFIITLAHLNSLLIFVLIFAIASLLLLRHIKKTLIAIPNTPKDDS*	hhsuite_tools	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0026	persistent	direct	high	1178	0.999	GCA_009379585.1_00757
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	30500	31600	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	30501	31601	GCA_009379585_1_12_27	GCA_009379585_1_12_27	+	211961	.	COG0842	ABC-type multidrug transport system, permease component [Defense mechanisms]. 	MRRFIKQYLTIWLDIIKDRSIFLTMVLSVVFYGFFYPFAYQAQRPADLPIVIVDEEQSPLTQAIIHTTSHTPNIHVLAVVSDFRQAQMLVQSAKADGILLLPNNLSQSIHHGQTGGVGLYLSSAYFLRTQNIGAGLVSSLQATIIQELGQVTQTRHKPMPELIHQSALFNPLSGYGSYIFPAVAPIIVYQTIVLGLAMLVAGYRQRLWRASACDFLAIYAVALTIGCLSCFYLFGFVFWWHDYPRGGNFWGMMLGVPIFVSCAIGVALLIASWVADGAKVGVLLIFSSVPLFMLTGLAYPLMAMPKFLQPLAHALPTTQGVQMFIQLNQMGVSIQDVWQKMAYLASVAVLCLGVAFWRLRLVNRSV*	mmseqs_cdd	nonviral_gene	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0027	persistent	direct	high	1100	0.999	GCA_009379585.1_00758
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	31925	32044	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	31926	32045	GCA_009379585_1_12_28	GCA_009379585_1_12_28	-	211961	.	PDB:2MXZ_A	L-alanyl-D-glutamate-peptidase-endolysin	MAQASGKLGVNVRWGGAWMVITGKAGTPQEWVKAYRAGG*	common_virus_hmm	common_virus	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0028	shell	ambiguous	low	30	0.25	GCA_009379585.1_00759
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	32014	32241	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	32015	32242	GCA_009379585_1_12_29	GCA_009379585_1_12_29	-	211961	.	.	hypothetical protein	MHKFSAFVVKAITPDEIRAAGEQFKSHPENNAPATADKLIANKSGFVLSERSLKNLQMIIAPLPKQWHRQAVSWA*	.	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0029	shell	direct	high	227	0.996	GCA_009379585.1_00759
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	32241	32567	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	32242	32568	GCA_009379585_1_12_30	GCA_009379585_1_12_30	-	211961	.	PFAM:PF06805.11	tail-assembly-protein-I	MKTVILHGILAKKFGKTFKLSVNSTKEAMRALCVQLTGFEAFMMNAHKQGLRFAVFHDKHNVGENELDMNHTAKIIRVVPVVEGSKKEGVLETVIGAVLVVAGVVVTG*	hallmark_hmm	common_virus	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0030	shell	direct	high	326	0.997	GCA_009379585.1_00760
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	32667	32849	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	32668	32850	GCA_009379585_1_12_31	GCA_009379585_1_12_31	+	211961	.	COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family [General function prediction only]. 	MNSRQMIKLITDDGWYEVAVRGSHHHYKHPTKQGKVTIPHPKSDLPIGTVKQILKQAGLK*	mmseqs_cdd	nonviral_gene	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0031	shell	direct	high	182	0.995	GCA_009379585.1_00761
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	32882	33289	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	32883	33290	GCA_009379585_1_12_32	GCA_009379585_1_12_32	+	211961	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MLYPIAIEKPVSTNECYGVIVPDIVGCFSAGDTVDEAVKNAYEAIVLHLDMLADDGEDIPQATDIAHHQENPDYQGMIWAVVDIDLSAYMGKSEKINVTLPSRLIVKIDEKVKAHKSLYKSRSNYLAQLASRDLA*	mmseqs_cdd	nonviral_gene	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0032	shell	direct	high	407	0.998	GCA_009379585.1_00762
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	33281	34060	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	33282	34061	GCA_009379585_1_12_33	GCA_009379585_1_12_33	-	211961	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MRLTKTIKEAIHAHAKICYPAECCGLIIDGQYYPCDNVTPNPTEHFEIDPIDMFEMGEKGQIQAIVHSHPDGNAEPSEVDRVQMGIHGIDWVICAFGYHADGKEYFDVKCHKPKAYQAPLLGREYHHGVQDCYSLVQDYYSRELDITLPSFARSDDWWENPNHEPLYENNFTKAGFIKMQDKNDLQKHDVILCRVGRTHHVNHALIYVGDGKLKSETTPDCVGNALILHHPHGSLSVREIYGDNWQRRTAMVVRHQSLG*	mmseqs_cdd	common_virus	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0033	shell	direct	high	779	0.999	GCA_009379585.1_00763
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	34444	34647	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	34445	34648	GCA_009379585_1_12_34	GCA_009379585_1_12_34	+	211961	.	.	hypothetical protein	MADKASPQARKKATANYFDKSLARIGLVISHTEPHVLDALNQIMAHKDCSKAMAIKIALVEYARTLD*	.	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0034	shell	direct	high	203	0.995	GCA_009379585.1_00765
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	34644	35312	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	34645	35313	GCA_009379585_1_12_35	GCA_009379585_1_12_35	-	211961	.	PFAM:PF05100.11	minor-tail-protein-	MSFNTDIQQTTVQGFITLYELDARKLGGEIYRFHGHNDGVIRWQGQDFHPIAIKADGLEMRSDGRASTPKLSIGDKINGIQGAVSALCRLYDDFARAKLTVTHTLQAYLDSHDAQNYRQQEWYIEQKVSENPSLGIVEFELSNPVDFEGQKIPVRQITTYCNEAVCGRYRGEICGYTGTARFTHDGKPTDDPTLDRCSGLLAHCKLRDNEGSFCGFPAAGLI*	hallmark_hmm	common_virus	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0035	shell	direct	high	668	0.999	GCA_009379585.1_00766
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	35396	35785	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	35397	35786	GCA_009379585_1_12_36	GCA_009379585_1_12_36	-	211961	.	.	hypothetical protein	MSETTLTELSRTEAQVLQSFIAQVDFWKNQHGDKAATIEVIYYPEDDGFEVANGEPNNGVLKRNRTTAFRADLLAWASNQLRQLQGWDNSQTVTEFSLSYKNDRYGVRAALASEATDKADDGDDAKNTD*	.	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0036	persistent	direct	high	389	0.997	GCA_009379585.1_00767
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	35889	36287	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	35890	36288	GCA_009379585_1_12_37	GCA_009379585_1_12_37	-	211961	.	PFAM:PF05939.12	minor-tail-protein	MGDFITFLTYIESEKLNLREKTMKTFNWDISADSSETTDLNTTITAFGDGYEQAVSFGINNSRKSWQCSKIDTKAVIDEIYRFLIDTKGVEPFNFKPLTDEPSIKVRLDGEVSRQKTGGDVWQIGFTLKQVF*	hallmark_hmm	common_virus	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0037	shell	direct	high	398	0.997	GCA_009379585.1_00768
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	36359	40045	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	36360	40046	GCA_009379585_1_12_38	GCA_009379585_1_12_38	-	211961	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MGGFLLGEFMSNTYRLDIQVNADSANTALGNLKEHFDKIEQSSGKAGVGINGFSDKADKASKSSKKAGDGAKKFGDDAKKAGDDVDGLKRKTDGLKTAFGALKGVMFTAFAVAGVGGIIATADQMQNLASQIRLATDSTEQFHAVQTKLRAIANEQRSSFDAVVDLYSNSQRSLSALGKSQQDVINFTRNMTMAMNVGGRSAQAQAAALTQLGQALASGVLRGDEFNSVAEQAPILMDLIAKEMGVTSNAIRDLAKDGKITADVVYNAVAKATDSLSVMSAKMPTTVSQALQVIKNEYNYLIDDIMNQNSMMSQNIANAVLWVAEHFRTLVSAGAMVGAVWLANVAKNSALVASFVSLTSSTLANTKASIANAFSVQGQITAYNALSTRIMLLRLTKAHYIDLTKTAIATTAVYARSLVGLATSFNTATASARLHTLALAGVTTAKRTAMGVGILATRAITGLGGAFMSLGRIITAHPIIAIGAVLASVVVSTHGVTGALESLSDAFGVVTLMAKDFIDFIGNGFSMAWDTVSAFADNMLAKVGDTTKGSTGAFSNFFATSHGGFVGMLQVAAKTFDLINAAAKAGAKNALHNFVQLGKTTKNIFYGIGNAFVSIIEMMINNAARKIDFLSTKANGMAKVLGIEDSIPLIGTVSLGRLQYDNVDFGVAHTIKDNNTNSAYNYVTQLADKATQATKANASLADSYNSVGSAATNASDKTKKTADDITDAINELDALVAKLHHESHQLLNNSLSEMIFETDNKLGKFYEATQAQKQKLKDLAGQKDLYTATKKANDELKSLARTIKLVGKQTPFDELAHDLFDVRHEMSVLNGETKNNLLLWAANAENAKLAFELNQRSSQIKHDAMLSNHASSYQRELLNIDREINQELQKYAGLKQDGTEHIYEQIKANLQLHATEQKKLATHKAYMQLVFDSRSEEEKRLDILDEQLTILAEQHRLYGTDVSAQSRQLMSELLDLPKPDSSAFDELNFEHETRLNRLGRFMDKQKQLYKDNEDALTQIAQEGVAARIAIDEAYQDAKRTLILSQSENIFESLASITKDSLGEQSKAYRAMFAIEKGFAIARSIMAIQTALANASASGPFPANLGMMATVASQTANIISAIKSVVMPVGQAHDGIMSVPKSGTWNLEKGERVLPRHTAQALDKKLDGMQNGNAGQVINVHVTVNSDGSNVQADTQMGKTMGEAMAKIARQVVIQESKQNGHLDRLYRR*	hallmark_hmm	common_virus	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0038	shell	direct	high	3686	1.0	GCA_009379585.1_00769
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	40078	40914	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	40079	40915	GCA_009379585_1_12_39	GCA_009379585_1_12_39	-	211961	.	.	hypothetical protein	MAQELPTTESLFDFLYLDSIKIRSFYAQLTGFGSLASIKANNALNSSLASEGALGVNAMAKIDAKVNYATGENQSSEKTYDATPTLPREMIDKLDELGFISRELGENSAGNLVLLNGVLSITDIETLQNLLEPTMHFATEEECKQLYGDRKRQAVKKKLEENKPVVQLIKAIPYALEARLKVGEDMVWMTLNRGEMVGNPHDINLKHGKVLFGEYYVLGVLDAIPNDDMNIDMTTGSFGDVILELSQSLKETMGRNTSSYGITPIAIFRVIRTNQQAK*	.	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0039	shell	direct	high	836	0.999	GCA_009379585.1_00770
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	40877	41059	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	40878	41060	GCA_009379585_1_12_40	GCA_009379585_1_12_40	-	211961	.	.	hypothetical protein	MQDNAKKSDATHHSAQLLRDMFSCLNQAMSRETEKFHQEQKKVKEEINRGARITNHRISL*	.	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0040	shell	direct	high	182	0.995	GCA_009379585.1_00771
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	41192	41404	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	41193	41405	GCA_009379585_1_12_41	GCA_009379585_1_12_41	-	211961	.	.	hypothetical protein	MIKPDAKEQGEFQITCHQATNQAMNYLHGLHAEIKRLGGVAPSLDIDEDEIARAIITRMVQGKRFMVNLD*	.	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0041	shell	direct	high	212	0.995	GCA_009379585.1_00772
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	41849	42310	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	41850	42311	GCA_009379585_1_12_42	GCA_009379585_1_12_42	-	211961	.	.	hypothetical protein	MAFDLTLLKKDAKMSAKREIEFDGLELTLEIQASEAFKRAAAEVQKIANTPKKVTKDSLKRGNQDEIGEYEAMLFILGEYCISQWNVTADGEPLAINGDNFLILLDQGFEKDKLTQFITLLFETYASLSQEFEDNKAKLVKKSTTATNGKKSG*	.	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0042	shell	direct	high	461	0.998	GCA_009379585.1_00773
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	42361	42507	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	42362	42508	GCA_009379585_1_12_43	GCA_009379585_1_12_43	-	211961	.	.	hypothetical protein	MEYITIIVDFMKYLIEKHGLFVIWLMVASLITLYKLDMILTAVHLFFN*	.	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0043	shell	direct	high	146	0.993	GCA_009379585.1_00774
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	42591	43499	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	42592	43500	GCA_009379585_1_12_44	GCA_009379585_1_12_44	-	211961	.	PDB:5NGJ_B	Tail-tube-protein	MSSGAFVKTAYAKQTGETLPKTGWKTLPNISNGLTVATELTNSEMLSGSRMAKAGMVTSASVQGDIETELMFGAYDELLAAAFWSEWSSGASPNTLSVGATKHQFAIAKDFSDINVNHVFTGCVVSSFGLSVDTSSLIKLKFGMTGLGYQESKTTSFAKTPTAQADTAKASGLSIGEIKVNGTKLDVCVESFSFELDNQTEVQKCLGDNIYGGNILAMLTNITGSMTIAYSQKAHEMISNQMTGTTLSLELPIKFGNSKYVIKIPKFQVSGEIPSPSGTDLVTVDLSYTVVDESPVIEKHTA*	hallmark_hmm	common_virus	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0044	shell	direct	high	908	0.999	GCA_009379585.1_00775
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	43503	43691	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	43504	43692	GCA_009379585_1_12_45	GCA_009379585_1_12_45	-	211961	.	.	hypothetical protein	MPKNRHRRLLQLYGEINELGAILDAPKPKDIHPHEWILMKDQLYYMRQYYRVLKQRTDDTEN*	.	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0045	shell	direct	high	188	0.995	GCA_009379585.1_00776
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	43691	44074	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	43692	44075	GCA_009379585_1_12_46	GCA_009379585_1_12_46	-	211961	.	PDB:2L25_A	tail-completion-protein	MNSFHIEQTLLTHIKAWEHFDDVPLAKENRNFKPPDGIWGRVTILGGVNQVRSISDKPDIMQQGTLVIQLFCPQDLGTVAIKQKADSLANHLQTRRFGRLETLTASIINAGFHDYYQINVSVAWRYY*	hallmark_hmm	common_virus	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0046	shell	direct	high	383	0.997	GCA_009379585.1_00777
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	44440	44640	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	44441	44641	GCA_009379585_1_12_47	GCA_009379585_1_12_47	+	211961	.	PFAM:PF16777.4	transcriptional-regulator	MPKITSTPKSQTQRTADSDAKRGFKTKGLKLHIDDISLIENLSKRLNIPQNQLIMDAVRAYQRQLD*	phrogs_hmm	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0047	shell	direct	high	200	0.995	GCA_009379585.1_00778
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	44637	44984	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	44638	44985	GCA_009379585_1_12_48	GCA_009379585_1_12_48	-	211961	.	PFAM:PF04883.11	tail-component	MGIKWNKKLSIEPIADKIDATYRKFAIDCYNNVIALSPVRKGRYKNAHHISIGSPSYAETGGGIELVLGIPKHTYPLIYIQNNLPYALRLEHGWSQQAPTGVYGNAFNSAIANLG*	hallmark_hmm	common_virus	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0048	persistent	direct	high	347	0.997	GCA_009379585.1_00779
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	44984	45334	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	44985	45335	GCA_009379585_1_12_49	GCA_009379585_1_12_49	-	211961	.	PFAM:PF12206.7	head-closure-Hc1	MKQEITQEIKQAFDTDLKDAVKDFTAKRIILSDDDWAVNDTQVLSTINYSGRGVFTGFHAYEIDNQTIMQSDVKLICLQDELTEIPQIDDEINEMKIISISHDPAEVSFTIQLRGF*	phrogs_hmm	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0049	persistent	direct	high	350	0.997	GCA_009379585.1_00780
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	45463	45855	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	45464	45856	GCA_009379585_1_12_50	GCA_009379585_1_12_50	+	211961	.	.	hypothetical protein	MNVIYKTEAGTKVKKAVKALNIKAKIKVTQHRYKVYVSITTTNAKLCEVEALKKVTSEMTSEIDDIYVTHNNNQTNEYAKMLNDLAVKFFCKKYRNNHQTDEELAEIAKPHIQKIINGTHRLSSEFWATI*	.	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0050	shell	direct	high	392	0.997	GCA_009379585.1_00781
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	45903	46112	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	45904	46113	GCA_009379585_1_12_51	GCA_009379585_1_12_51	+	211961	.	7DTR_A	HTH motif, protein interaction, VIRAL	MKPHIDNHRPDPTYLRALLKKAELSQRKAAHMLGVSERMMRYYLVHTDDPNYRPMPYAVQFCLECLAKT*	hhsuite_tools	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0051	shell	direct	high	209	0.995	GCA_009379585.1_00782
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	46109	46468	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	46110	46469	GCA_009379585_1_12_52	GCA_009379585_1_12_52	-	211961	.	CDD:cd08053	Head-Tail-Connector-Protein	MITLDDLTDIDKADEQTVVIVNAWLNKHKIRAFDKTPDPIRQAGRYIAKAWLDGDLFVARTEGVVTSKSSKAGDVSVSKTYADGEQGQAMSQNEQIALALIEPYLQQPLGMFGLPLVRG*	hallmark_hmm	common_virus	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0052	shell	direct	high	359	0.997	GCA_009379585.1_00783
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	46465	46977	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	46466	46978	GCA_009379585_1_12_53	GCA_009379585_1_12_53	-	211961	.	PDB:6R3A_A	Major-Capsid-Protein	MAKLREIFNKNVTLSYQVKDNLQRSKFWQSGAFVSDARLRPLLNSGSLTFDVPFIHPIDGNLEANYSNTIMTDIAMPRSIEGSKSKGRLALLNEGFIESRLESYLLGQSPLKLMAQMIDDYWLTQAENRAIATLFGLLNYDQSNGKKLSTDISKATADDSSLGGVFRMKQ*	hallmark_hmm	common_virus	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0053	shell	direct	high	512	0.998	GCA_009379585.1_00784
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	46980	47630	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	46981	47631	GCA_009379585_1_12_54	GCA_009379585_1_12_54	-	211961	.	PFAM:PF06810.10	minor-structural-protein-	MNLEELLKSLGLDDEAIGKVVEATKPDQAQAEEIERLRKHNETLLGEKKAESEKRRAEQAEKERLAEETARKKGDFETLEKQYQAKIQELNEQIAKRDKERDENLVKSHAQKLSSQLSDNPANQEILQILIEKRLSAKDGQLSVLDDSGAVSIMTLDDLAKQMQNCGKYDSLIIGTKSCGTGSNGQSAKRAGDYSEQERLALAHSNPALFNQLFLE*	hallmark_hmm	common_virus	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0054	shell	direct	high	650	0.998	GCA_009379585.1_00785
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	47683	48687	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	47684	48688	GCA_009379585_1_12_55	GCA_009379585_1_12_55	-	211961	.	PFAM:PF06152.10	minor-capsid-protein	MKHLINLERFKVHLANKFKTTLNEIDEFLQLVVFRHEISELNYKEFELLIGESKQKLLGFLAGYALELTQDWQELYDYSYTLETKMIDDDKPDTLNMNEPQFDADSPIKLSAQVGVTLNQILAKFGDEQSTKISNAISYAYANGLPNQELVRIIRGTRKNRYQDGILVITTRHAKTIAHTGTAIVASQAKQQFIHDNKDIIKGIKVIATLDLRTSGICRHLDGEIMPIDKAVYPPYHYNCRTSFEIVYDGYQTPKQRASMDGVVKNQTYYEWLKNQPAQYQDEVLGKTRAKLFRDGGMTVERFRALQLDKYFTPLTLEQMRALEPKAFKKASIH*	hallmark_hmm	common_virus	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0055	shell	direct	high	1004	0.999	GCA_009379585.1_00786
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	49060	49356	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	49061	49357	GCA_009379585_1_12_56	GCA_009379585_1_12_56	-	211961	.	.	hypothetical protein	MNEFIIPNSNSVSNDFNYSRTDLDAQEQQIAEFIKKGGKVINLDNSEQPKKKSAKKRDFNNQRINSKMHLVLCYLKRSGKRMTGLQIQEKRHIGNNFR*	.	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0056	shell	direct	high	296	0.997	GCA_009379585.1_00787
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	49442	49681	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	49443	49682	GCA_009379585_1_12_57	GCA_009379585_1_12_57	-	211961	.	PFAM:PF10078.8	transcriptional-repressor	MQIVELRNYLLSMNKQDRIEFAKKCGTTYGQMMQIYRGNRTCHPTLAIEIDKHSKGCVKCDVLSPDTDFNYVRANSESV*	phrogs_hmm	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0057	shell	direct	high	239	0.996	GCA_009379585.1_00788
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	49806	50528	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	49807	50529	GCA_009379585_1_12_58	GCA_009379585_1_12_58	+	211961	.	PDB:2FJR_A	Repressor-protein-CI	MTPEVRLKNLTLVLEKIEKEKGLNSFAKIAKEYDLNASYLSQLMNGNRQIGERSARSLEKKLKLEKFSLDNCPLQSNINPDFESITEWDNGAPLDDDEAEIPFYKDIAFACGHGAVNGDAPLEGRKLRMGRRTLSNLGVMPINAYAVTACDDSMTPYVQDGDTIYIDKGRKEVKDGRIFAIRFGELCLCKRLYRLPDGGVRIVSDNAAEFPEQVATKQQISDGEFEVIGWVWSVSRLERW*	common_virus_hmm	common_virus	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0058	shell	direct	high	722	0.999	GCA_009379585.1_00789
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	50580	51476	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	50581	51477	GCA_009379585_1_12_59	GCA_009379585_1_12_59	+	211961	.	PF14337.6	Domain of unknown function (DUF4393)	MTAETFHLIPAITGAVSGAASVGLLNGPLQTLQDIWFVVYGHKWHYKVESIKAQQAMNIQAMQNNIQTGIEKIPANALKDPNVAIIGPALEASRFHMNEDSLREMFANLIVSAMDERKDGQVHHAFVEIIKSLSPLDAKNLEYLSQSGDAPIVNIVKEASYGFHMLHQHVFLGNRQVLDPNLITPSIDNLARLKLIDVTYTEHLTHEPVYDPFYHSALYQEKVSALGKELKLRRLDISKLQDLTRPVELDGKVLNKDERTEQIELINKELESKIEIQKGIIKLTAFGKNFLSVCSPTT*	hhsuite_tools	nonviral_gene	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0059	shell	direct	high	896	0.999	GCA_009379585.1_00790
GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote	cenote	CDS	51774	52160	GCA_009379585.1	NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585.1_NXDI01000002.1	GCA_009379585.1|NXDI01000002.1	GCA_009379585_1_12	GCA_009379585_1_12@C0	51775	52161	GCA_009379585_1_12_60	GCA_009379585_1_12_60	-	211961	.	.	hypothetical protein	MFGIKLLHSDDFIKSASSFGCFLAIMDKQTNKNHVYNLSTQVQRFELIDIDQVANLANSVQNGAISATVGTLLVRAGVLPALVALSIGAGLPNRTKDAYVCHIEFDDSKSAILQLSKHKYQQFLKHIA*	.	hypothetical_protein	C0	52161	0	52161	GCA_009379585.1|NXDI01000002.1@region_1_52161@tool_cenote_CDS_0060	shell	direct	high	386	0.997	GCA_009379585.1_00791