core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	403495	403821	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	1	327	GCA_009648895_1_1_385	GCA_009648895_1_1_385	+	4408047	.	cd08026	Cysteine-rich 4 helical bundle widely conserved in bacteria. This functionally uncharacterized protein forms a 4-helical bundle with a bromodomain-like topology. It is present in major bacterial lineages and contains highly conserved cysteines in a repeated pattern, whose sidechains appear buried. Some family members have been (mis)annotated as putative ferredoxins.	MLDEYKKCIEACYLCATACDNCAASCLEEENLEMMRECIKLDMQCANICRLAAQFMALNSDSAQALCRLCADVCQKCGDECGKHEHDHCQECSRACHHCAEQCRKMAA*	mmseqs_cdd	nonviral_gene	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0001	shell	direct	high	326	0.997	GCA_009648895.1_00381
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	404009	404218	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	515	724	GCA_009648895_1_1_386	GCA_009648895_1_1_386	+	4408047	.	.	hypothetical protein	MMPYKCLKHVIVIRPVRLLLRVNVPLTLPNPLQTVVIVTLCPELLNALFRLFSISFKNEIVLITVEFDW*	.	hypothetical_protein	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0002	cloud	direct	high	209	0.995	GCA_009648895.1_00383
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	404948	406129	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	1454	2635	GCA_009648895_1_1_387	GCA_009648895_1_1_387	-	4408047	.	PDB:4A0U_B	Tail-fiber	MHRIDTPTAQQGKFGAGKNGFTAGDPTLGVPATQLDETFFDSVQEEICAVIEGAGIQLKKSDRAQLSAAIDKMIQAKHDLALLIKNNLSDVDDVEQARKNLGLGKLALKDSVTAFDVNAIPNGRQLGTAHLDTLTGSKYGRYYQQYTANATAANGYPTNVAGALDVIQNGAGSSEGCTQEYRPYTSNVCYRRYYRGDSKAWSSWEYDLTSAGGVINGFVEITGDARSVTIKPKTANNGYYFFGRKSDNTNHFYLGQGSNNSDNVTWGNYLTNSSISLVAGGVAVSGIITPSNWSNFDARYQAKNTANRASNGWFKDGSTGLIFQWGVARRSGDSTKIAFPVAFPNACLNVQLTLAWAGSFHDQNIYAQLIDRTAFNYIAGSGETMAYFFAVGY*	hallmark_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0003	cloud	direct	high	1181	0.999	GCA_009648895.1_00384
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	406187	406759	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	2693	3265	GCA_009648895_1_1_388	GCA_009648895_1_1_388	-	4408047	.	PFAM:PF10076.8	tail-protein	MAVEDEYTRLLKRLLPPGPAWEGNNPLLEGLAPSLARVHAQSSALMREIDPGAAVQLLDRYEALCGLPDECTIEETQTLSQRQRRLAAKVNGYGGINEAFYRRQLDALGYRSVSITQYQNEAENPRPDIATDDDYRYLWQVNIPTLATIEVMTCTSSCVGSLRTWGDTVIECVINKVSPSHTEVVFAYTE*	hallmark_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0004	cloud	direct	high	572	0.998	GCA_009648895.1_00385
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	406750	408153	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	3256	4659	GCA_009648895_1_1_389	GCA_009648895_1_1_389	-	4408047	.	PFAM:PF04865.13	Baseplate-J-like-protein	MADSGFSRPDLPNLIATIRSDLLTRFETDVVLRRLDAEVYSRVMAAAVHTLYGYLDYLARNMLPDLADEEWLSRHGNLKQVPRKQPTTAGGYARWESVSSGITLPAGTEMQTDEQKQYVTTADATVNDEGVLRALIEAVDAGTGGNLDDKTPLRLMTPVAGLSSTCYAESVEGGTDLETLEDWRSRIMARWYYTPQGGADADYRIWATDVAGITRAWVFRHHAGRGTVGVMPANSDLDNPVPDETLIDAVKQYILPLAPVAGSGLFVFPPTLRKIDFEIALAKDTPAIRAAVTKEIKSALFRDGEPSGKIYLSRISEAISLATDQFAHRLISPAKDVELGTYELPVIGEITWSNYNESDVEIDVALNSFSPNPVTLPDSPDAFATATFTPENLPSLDGVNITWDFVPAGEGEPDPSTLCVITPSADNSGVKATGIAPGTVHVRVTVEYKGKTATDNSYLDIEEVTWL*	hallmark_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0005	cloud	direct	high	1403	0.999	GCA_009648895.1_00386
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	408146	408562	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	4652	5068	GCA_009648895_1_1_390	GCA_009648895_1_1_390	-	4408047	.	COG4381	Mu-like prophage protein gp46  [Mobilome: prophages, transposons]. 	MIIFVNGLLKESTDYFDDLTRSVIISLFSWRRAEADDDTEMPFGWWGDTFPSVGNDRIGSRLYLLQRSKLTNATATRAKDYARQALAWMEEDGVAARVDVAATRTGINSLQLEVTVWQQDGSKHAIIFDDIWQEVLNG*	mmseqs_cdd	nonviral_gene	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0006	cloud	direct	high	416	0.998	GCA_009648895.1_00387
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	408566	409150	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	5072	5656	GCA_009648895_1_1_391	GCA_009648895_1_1_391	-	4408047	.	CDD:TIGR01644	phage-baseplate-assembly-protein-V	MGIKQAISNLAARAVLAALDSSRKCQAAGLKLIAGDTKENVEYIEPYGFTSTAHAGAEAVVLFPSGDRSHGVVISVSDRRYRLKGLKSGEVAVCTDEGDSIVLKRGRVTEITTSELVVNAESKISLNAPQLVVNASSGVSFTTPTITTSGDFSAAGKVSDGVGTMSAIRTTYNGHKHTAQGETAETTGPSASMG*	common_virus_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0007	cloud	direct	high	584	0.998	GCA_009648895.1_00388
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	409442	410251	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	5948	6757	GCA_009648895_1_1_392	GCA_009648895_1_1_392	-	4408047	.	PDB:5LI4_E	tail-component	MSVSFDSIPSNIRVPLFYAEMDNSKANTAQTSAPALLIGQALEDAAIERNKLVLMPTADQARKLCGQGSPLARMVDAYRKTDPFGELYVIAVSDPKGAPAVGEVTFSGSANASGAVSLYIGAKRIAGAVTSGDSALDAAQSLADAINADPDLPVLASATAVTSDVKITGLTVAPTLTIKTGESAGIDVTIVPDNATNKTLSWESDDTAIATVDDDGTITGVAEGAANVTATTTDGSGLSGVCEVTVEKNETRLPSLHNPAKRRGDIGDL*	hallmark_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0008	cloud	direct	high	809	0.999	GCA_009648895.1_00390
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	410241	410405	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	6747	6911	GCA_009648895_1_1_393	GCA_009648895_1_1_393	-	4408047	.	pfam10948	Protein of unknown function (DUF2635). This is a family of phage proteins with unknown function.	MFVIPVKGRKVPDPLRGDVLPEKGRNVEKNSYWLRRLRDGDVKETSQKRRLNVC*	mmseqs_cdd	nonviral_gene	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0009	cloud	direct	high	164	0.994	GCA_009648895.1_00391
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	410411	410971	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	6917	7477	GCA_009648895_1_1_394	GCA_009648895_1_1_394	-	4408047	.	PDB:2GJV_C	tail-completion-protein	MKLSLIIEALRSRAPSFKSRVAGAAEFQALESNAKMMLPAAYVIPTGDTVSRQESQTDYYQVVNEGFAVVVVLDNRRDLRGQTAAFDAVDSIRAEIFGAILGWEPDDCTHQITYDGGQVVEMNRAALYYQFDFTAEREITDIDTRHHRDLDELVPLETVAVDVDFIDPGNGPDGDIEHHDEIHFTE*	hallmark_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0010	cloud	direct	high	560	0.998	GCA_009648895.1_00392
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	410968	411486	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	7474	7992	GCA_009648895_1_1_395	GCA_009648895_1_1_395	-	4408047	.	PDB:2KZ4_A	Head-tail-adaptor	MADSPLFHVDYDVPEQMEFKRPVMRRAFVKIGQVHMRDARRLVMKRGTSKPGENPGYKTGRLARSIGYYVPRASKNRSGMMVRIAPNQKRGEGNRRIEGDFYPAFLFYGVRRGAKRQRSHHKGKSGGSGWKVAPRNNYMTEVLARRKAWTRYTLQRALRKALRPPKVRRVRA*	hallmark_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0011	cloud	direct	high	518	0.998	GCA_009648895.1_00393
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	411479	411874	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	7985	8380	GCA_009648895_1_1_396	GCA_009648895_1_1_396	-	4408047	.	PDB:2KZ4_A	Head-tail-adaptor	MKRSPSQTATRYSFPDPGELNRRVQFRKRVDSPAADFGTESEEIDTFRAWARVQQTGATTYQSSVQTGEAVTHLITIRYRSGMSSEWQIVLPGGEVLRVRRIRDLNSERRFLLLECESLGDADHYSGAVYG*	hallmark_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0012	cloud	direct	high	395	0.997	GCA_009648895.1_00394
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	411871	412188	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	8377	8694	GCA_009648895_1_1_397	GCA_009648895_1_1_397	-	4408047	.	PFAM:3JVO_G	Head-Tail-Connector-protein	MILSLSEIKAQLRIEEDFTEEDALLTLLGGAAEARTSNYLNRRLYATEVPDTDEDGLVVSDDIRQAMLMLCSHFYENRSSTSDVEMTEMPQSFKWLVDAYRFIPL*	hallmark_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0013	cloud	direct	high	317	0.997	GCA_009648895.1_00395
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	412223	412489	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	8729	8995	GCA_009648895_1_1_398	GCA_009648895_1_1_398	-	4408047	.	PFAM:PF16461.4	tail-tube-protein	MTLDPTALSVAVGATSPIKASVTPENATNKVLNWASGDEAIATVDASGVVTGVAEGGPVDVTATAADGSGVSASCAVTVAAEKRTKSK*	common_virus_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0014	.	unmatched_CDS	none	0	0	.
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	412495	413715	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	9001	10221	GCA_009648895_1_1_399	GCA_009648895_1_1_399	-	4408047	.	CDD:TIGR01554	phage-major-capsid-protein,-HK97-family	MKLHEMQQKRATIAAEMRALNEKIGDASWTEEQRSQWDNAKHEYDKLDAAIKREEELRAMDNILAAENEPEHRNNPEGSEDERRAAVFDKFVRHGLGELSTEEKRTLKEFRAQGIDDGEGGGSKGGFTVPKQFRNRVVEAMKAYGGIAGVCQILSTSNGQDIDWTYSDGTADMGVMLGENEEASEGDVTFEPITIGAKKMTSKIIRVSNELLLDSGIDMNGYLAARIAQRLGRGEAAQIVNGDGTGKNVKGLAKWVTKTTSAAAADAFTWEELLALKHSVDPAYRNSPKFRFAFNDNTLLKISSMKDAQGRPLWLPDVVGMAPATVLNVPYVIDQAIADIGAGKQFVYCGDFDRFILRRVAYMTLMRLTERYAEYDQVGFLAFHRFDCALEDAAAVKALVGKDEAK*	hallmark_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0015	cloud	direct	high	1220	0.999	GCA_009648895.1_00396
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	413785	414408	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	10291	10914	GCA_009648895_1_1_400	GCA_009648895_1_1_400	-	4408047	.	CDD:COG3740	head-maturation-protease	MSDIEKRCYVGEVRAAEVEGEPTKIIGYASVFNSRSELIFGSFREVIKPGAFDDVLGDDVRALFNHDPNFILGRSSAGTLSLSVDDRGLRYEITAPQTQTIRDLVLAPMQRGDISQSSFAFRVARDGERWYQDEDGVVVREITRFSRLLDVSPVTYPAYQEADSAVRSLEQWRSQQAEQDQRSAEARQKQTTEKAARERVLDLLARP*	hallmark_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0016	cloud	direct	high	623	0.998	GCA_009648895.1_00397
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	414401	415642	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	10907	12148	GCA_009648895_1_1_401	GCA_009648895_1_1_401	-	4408047	.	PDB:8CEZ_K	Portal-Protein	MFLDAFFRSDPNAEPGNPENPATPLTGENIATTSGMISDVFVSPETAMKLAAVYSCIYVLSSNLAQMPLHVLRREGKTVRQATEHPVFYLVHDEPNPWETSYKWRELMQRHVLGWGNAYTEIKRNRRGEVIELAHRMPWESCLIKFDGRWRYGIYTEEGSWSVHPDDMVHIKAIGNCDKWGLSPIMQHAQTIGLGLSGQKYTESFFNGNARPAGIVSVKQELNDKSWDRLKKIWQKAAAALRTQENKTLLLPAELDYKALTISPVDAQLVEMMKLNRSMIAGIFNVPAHMINDLEKATFSNISEQSIQFVRFTIMPWVVNWEQELNRRLFTRQELAAGHYVKFNLAGLLRGTPKERAEFYHYAITDGWLSRNEVRALEDKNPVPGLDEMLVSVNAAQTSGSKDKTPEGNPDNE*	hallmark_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0017	cloud	direct	high	1241	0.999	GCA_009648895.1_00398
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	415642	415791	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	12148	12297	GCA_009648895_1_1_402	GCA_009648895_1_1_402	-	4408047	.	.	hypothetical protein	MKLYDVFGVVGFCLLISACYLRWGTAPAMAVAGGGLLLNGLAMARKRGR*	.	hypothetical_protein	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0018	cloud	direct	high	149	0.993	GCA_009648895.1_00399
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	415788	417515	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	12294	14021	GCA_009648895_1_1_403	GCA_009648895_1_1_403	-	4408047	.	PFAM:PF03354.14	Large-Terminase	MATYPNVNDANRYARDVVAGKILACRYVKLACQRHLNDLERAKDQRWPYRFDRDKAERFCRFSQKMPHTSGEWARKKLRLTLEDWQKFCFCVSFGWVRKSDGLRRFQEIYIEVPRKNGKSLIAASVGIYMFCADDEHGAEVYCGATTEKQAFKVFEPARQMVQKLPALRKRFSIKPWAKKMTRPDGSVFAPIVGDPGDGDSPSCAIIDEYHEHATDALYTTMTTGQGAREQPLTLIITTAGYDIASPCYDKRSQVVEILEGIRTDGANETIFGIIYTLDKDDDWTSEEAIRKANPNLGVSLKPEFLRAKQELAKTTPSQTNKILTKHFNLWVSSKAAFYNMQRWQEAADPSLTLADFEGEPCYLGIDLASKLDLNAVVPVFMREIDGLKHFYCIGAQFWVPEDTVYSTDPQLKRTAERYQSFVNQGVLIPTDGAEVDYRVIFESILRLRDKVKIEICPIDPYGATSLAHMLNDEGLNPVTITQNFTNMSDPMREIEAALAAGRFHHDGNPILTWCIQNVVGKYYAGSDDVVRPTKEGNENKIDGAVAMMMGVGRAMLNEPGDFLSNLDDEDILTL*	hallmark_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0019	cloud	direct	high	1727	0.999	GCA_009648895.1_00400
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	417519	417947	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	14025	14453	GCA_009648895_1_1_404	GCA_009648895_1_1_404	-	4408047	.	CDD:COG3747	Small-Terminase	MAGVRAAGGGRKKNLPVSGKSSITNIRPPQELMSAVAVKVWKSTSKILIERGLFEPEDAPVLMAYCNAFHLMIEAEKMIATSGIIATGESGIKKHPAINVRNDAVAQIARLGSLLGLDPMSRARMLGAGTPDDEEGNEFDEF*	hallmark_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0020	cloud	direct	high	428	0.998	GCA_009648895.1_00401
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	418114	418473	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	14620	14979	GCA_009648895_1_1_405	GCA_009648895_1_1_405	-	4408047	.	PDB:5H0M_A	HNH-endonuclease	MPPKTPKACRKRGCGKSTTDRSGYCEAHKSAGWERYNNGRTATQRGYGAEWRKVRNIVIKRDKGLCQTCKREGVIRPGSSVDHIIAKAHGGTDDPSNLECICSEHHKAKTARERLSVMR*	common_virus_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0021	.	unmatched_CDS	none	0	0	.
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	418564	419112	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	15070	15618	GCA_009648895_1_1_406	GCA_009648895_1_1_406	+	4408047	.	pfam10908	Protein of unknown function (DUF2778). This is a bacterial family of uncharacterized proteins.	MLCFFLKEGVVMALKGKFILNEADFAPLTIYGVGTFLAFSGNGEYRNRSNSTTTPDNGPIPEGKYWIVDRPEGNWKNGLRSWAIDTQRTYWDGVPTDHSTWFALYRDDRGIDDTTWINNVRRGSFRLHPGRLSLGCITLAHSSDFEIIRKALLNTEQVRVPCMKSLMTYGCIEVVTNANDRP*	mmseqs_cdd	nonviral_gene	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0022	cloud	direct	moderate	515	0.938	GCA_009648895.1_00402
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	419093	419356	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	15599	15862	GCA_009648895_1_1_407	GCA_009648895_1_1_407	+	4408047	.	.	hypothetical protein	MPTIARRALKVVFFIVLSMLVGRSFDIYSLVSTDTAISLSYKLFGEGGQENVEMAYVIIDTVAIVVLTSIIYVIVMMVLRRFLKSSK*	.	hypothetical_protein	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0023	cloud	direct	high	263	0.996	GCA_009648895.1_00403
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	419381	419701	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	15887	16207	GCA_009648895_1_1_408	GCA_009648895_1_1_408	+	4408047	.	.	hypothetical protein	MKKIQLFTLITGVVMLSGCSAFQKHHGINWGNGSCPALAANQIQNGTLKIEDGRTLKCQIRPYVSNMACQGITDRTNADGVVCQNGMGDTALFIFDEKGVLKNHRL*	.	hypothetical_protein	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0024	.	unmatched_CDS	none	0	0	.
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	420233	420577	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	16739	17083	GCA_009648895_1_1_409	GCA_009648895_1_1_409	+	4408047	.	PRK10244	anti-adapter protein IraP. 	MKNVIYSMLAKISKMDAEAKQLTAQVEAQALLLSAMLITIGKGGSFEEMVEAVKQAINAALDSEDNTFKSETTVLLTQFNALLSIAASLDKKDPELDVSGLLKLTSSLSSDKIL*	mmseqs_cdd	nonviral_gene	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0025	cloud	direct	high	344	0.997	GCA_009648895.1_00404
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	420584	420835	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	17090	17341	GCA_009648895_1_1_410	GCA_009648895_1_1_410	-	4408047	.	.	hypothetical protein	MNDVMLFGEGWNGEILTIANRARAIHHIPIKHETRTVTFFITTYISDSGIPYLIGISELEPSQEDIEKAIVIYSPRGTSFPKY*	.	hypothetical_protein	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0026	cloud	direct	high	251	0.996	GCA_009648895.1_00405
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	421373	421723	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	17879	18229	GCA_009648895_1_1_411	GCA_009648895_1_1_411	-	4408047	.	PFAM:PF10828.7	Rz-like-spanin	MKVIGKFVIYVLLFMLTGLLSWRAGWNAHSDYVNAMAARKKAKAEDMIRSSEIKAARNSHEGKIVYHVINRDVIKYVQSPNRTVCKFDNDAVQLRQRAIDAANSLSGFDGAPMQSK*	phrogs_hmm	hypothetical_protein	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0027	cloud	direct	high	350	0.997	GCA_009648895.1_00406
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	421723	422211	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	18229	18717	GCA_009648895_1_1_412	GCA_009648895_1_1_412	-	4408047	.	CDD:cd16900	endolysin-R21-like-protein	MMSPALKQRIVAAVGGGAIAIATAMVAGKDGLEGREYVPYRDVVGVLTVCDGHTGKDIIPGKRYTDAECDALTQADMTHIARQIDPHIKVNTTDTQRAAIYSFAYNVGPSAAIKSTLMKKLNDGDYVGACNELKRWIYAGGKKWRGLMSRREVEHQVCMWDR*	common_virus_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0028	cloud	direct	high	488	0.998	GCA_009648895.1_00407
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	422208	422423	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	18714	18929	GCA_009648895_1_1_413	GCA_009648895_1_1_413	-	4408047	.	pfam04971	Bacteriophage P21 holin S. Phage_holin_2_1 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Members of this family fall into the holin superfamily II, and Phage 21 S holin is the prototype for this superfamily. It has two transmembrane segments with both the N- and C-termini on the cytoplasmic side of the inner membrane in E. coli. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the build up of a holin oligomer which causes the lysis.	MYQMDKLTTGIAYGTSVGNAGFWVLQLLDKVSPSQWAAIGVLGSLVFGFLTFLTNLYFKIKEDRRKAARGE*	mmseqs_cdd	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0029	cloud	direct	high	215	0.995	GCA_009648895.1_00408
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	423171	423404	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	19677	19910	GCA_009648895_1_1_414	GCA_009648895_1_1_414	-	4408047	.	.	hypothetical protein	MALVFIPALIVLLTAKEKELGRELTQEEVETLRDNAVGMVMPDEIGLEMNESRGYPDVDPENVWHDWLSYKNSFDVQ*	.	hypothetical_protein	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0030	cloud	direct	high	233	0.996	GCA_009648895.1_00410
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	423538	424233	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	20044	20739	GCA_009648895_1_1_415	GCA_009648895_1_1_415	-	4408047	.	pfam06323	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Phage 82 gene Q encodes a phage-specific positive regulator of late gene expression, thought, by analogy to the corresponding gene of phage lambda, to be a transcription antiterminator.	MIAQDYEYIRQQLITATADLSGSTKGQLVAFAENAQLATNRYKRKRLKVRDEETGDMITLDNPPLPGVQSRAKGSSIALVLPVEYATASWRRAVLALDEVECAWLLWCYSENIRYAHQVEIVRWGWEIFSEELKGQRIAGKTLERLRALVWLAAQDVKHELRNEPQGCYKAHALAQMVGVTKSTWSEGYAARWAQMRANFIYLDKRAVIDASKTRSKQKVANYKQVIAKPN*	mmseqs_cdd	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0031	cloud	direct	high	695	0.999	GCA_009648895.1_00411
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	424230	424592	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	20736	21098	GCA_009648895_1_1_416	GCA_009648895_1_1_416	-	4408047	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MTKTYEFTLPYPPSVNDYWRRGNGITYINKKGREYRRAVQEILHILKLDINITARLRLRIIANMPDKRRRDIDNILKAVCDSLEKGGFMQNDSQIDELKVIRGEVIPGGRLGIKVTEIEE*	common_virus_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0032	cloud	direct	high	362	0.997	GCA_009648895.1_00412
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	424589	424873	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	21095	21379	GCA_009648895_1_1_417	GCA_009648895_1_1_417	-	4408047	.	PFAM:PF07102.11	HNH-endonuclease	MKSIYRSAKWLAAVRQLDCCVLCRRWGVQAAHRNEDKGMGLKVDDSLTAALCVDCHHAIDNGSELTREERRALMDRAIVLTLRELTRRGLVVPK*	phrogs_hmm	hypothetical_protein	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0033	cloud	direct	moderate	171	0.6	GCA_009648895.1_00413
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	424876	425076	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	21382	21582	GCA_009648895_1_1_418	GCA_009648895_1_1_418	-	4408047	.	.	hypothetical protein	MRMGWFEHSDCTAEEADELLRQYRKRGMKAERSLSADCKTFVVRVLLPESKYPPRQDTTFQQRMWR*	.	hypothetical_protein	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0034	cloud	direct	high	200	0.995	GCA_009648895.1_00414
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	425079	425534	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	21585	22040	GCA_009648895_1_1_419	GCA_009648895_1_1_419	-	4408047	.	PFAM:PF05772.11	NinB/-Orf-homologous-recombination-mediator	MNLPKDGIRLHKSNFASIGQQLQPLLANGDCYRLIIKPWRETRSLSQNALAHMWFAEISDYLIKRGKAFASAAWVKDALKHSYLGYERREMTDVITGEKTIISSLRHTSDLDTGEMHFFLSQVEAWALSIGCRLTIPEDCEYSQLRAEQEA*	phrogs_hmm	nonviral_gene	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0035	cloud	direct	high	455	0.998	GCA_009648895.1_00415
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	426539	427198	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	23045	23704	GCA_009648895_1_1_420	GCA_009648895_1_1_420	-	4408047	.	PF11536.8	Protein of unknown function (DUF3226)	MADAIHINKVIEKEKILFVEGRDELVFFDSLLQFMGDEYHKTIQIIPYEGKAKLNEFLSMISKTEGFIENVSSFAVTRDADMNHGAAIESINSTLRRLFSFCKVDHNEFKETDALKIGVFVFPGKNKSGELEDLVLDAIKGNQVCALVDDYLNGLENTTKPKNESSDFTFPRKPSKAKIQIYFSSMKESDTRLGISAQRKYIDFNHDCFDEIKRFISLM*	hhsuite_tools	hypothetical_protein	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0036	cloud	direct	high	659	0.998	GCA_009648895.1_00416
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	427198	428307	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	23704	24813	GCA_009648895_1_1_421	GCA_009648895_1_1_421	-	4408047	.	COG1106	ATPase/GTPase, AAA15 family [General function prediction only]. 	MIKFLHIKNFKGLDDIELHNLKKVNIIAGKNGRGKTSILDAIFITNDIVSPDCLLKPIAFRGGVPNLNESDLWYSYFNAYDASKKIFIEFGNDKGRKYEATLEVESRKNRATENINVISSDAFDKNKMSLTSADSNFVLNIRLKDSTDPKRLDLILHAEQSINGSQITSKLTRHATNYINEPTTFITTSNKINQANTISVIGELIKRKDKERLLKNISLINKNITDIALVMSNEQPEILVDIGHKRLVDLSTLGEGVSKLLTIFAISFFTKNGIILIDEIENGIHYSLMPRIIKTLVELCNENNNQIFITTHSYDVIKTIGDMAKSNELTENDITFTRIGYSERKSKTISSTFSVDEVKASTEENWEIR*	mmseqs_cdd	nonviral_gene	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0037	cloud	direct	high	1109	0.999	GCA_009648895.1_00417
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	428568	429314	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	25074	25820	GCA_009648895_1_1_422	GCA_009648895_1_1_422	-	4408047	.	PFAM:PF06992.10	Replication-protein-P	MSEQLIQAIAHRDSQTLARLASKYQPAQERTAKSVVNTEAERLVDSLFRQLKQVFPASAATNLRTDTDEAVAKQQWIMAFAENGITSREQLSAGMKKARASLSPFWPSPGQFIQWCKEGGAIQALLPSVDELVEMVHVYCARRGYYESPEHYPWKHYSYYWMVTALYNGMRTYCWSETELANQAGYEIKKMANRIKSGEKIPKPRTLIRSNTSGKPLSREEGLAKLAELRVKFGLLHRKEQVKKQAII*	rep_hall_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0038	cloud	direct	high	746	0.999	GCA_009648895.1_00418
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	429311	430168	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	25817	26674	GCA_009648895_1_1_423	GCA_009648895_1_1_423	-	4408047	.	PFAM:PF04492.12	Replication-protein-O	MSMELMAKAMKITVGNPLRKLVLIKLADNASDKGECWPSYQHIADQCEITKRSVMNHIAALCEAGLVEKEARIGPKGNSSNLYILKLDNPAKSPAGSERNSLRGSESGSLPSESLSPEGSESGSLRTSHFIEPVNEPITSENATASSGAVKKHKDLIVPIRSHAAIRSPKGDKWGTVDDLRTAELIFGKVQEVTPAARKPNWAAWANDIRLMRIALNVTHAEIWQVFSWANTDHFWQTNILCPAKLREKWPTLTAQMTRPIRYRLAITQQHTPHWNSPEAWEDVL*	rep_hall_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0039	cloud	direct	high	857	0.999	GCA_009648895.1_00419
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	430259	430603	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	26765	27109	GCA_009648895_1_1_424	GCA_009648895_1_1_424	-	4408047	.	PFAM:PF10078.8	CII-like-transcriptional-activator	MRTTQKRTTSKTLQIETRIRSCIAALGVTQVAKGMGVHHSQISRMQTGKNCFVERAAKLLAVIGFDNREETVIIKGEQTAEVAKALISMLEHLKGETPYCANSAGASERKHMGM*	phrogs_hmm	hypothetical_protein	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0040	cloud	direct	high	344	0.997	GCA_009648895.1_00420
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	431195	431596	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	27701	28102	GCA_009648895_1_1_425	GCA_009648895_1_1_425	+	4408047	.	PFAM:PF08667.9	transcriptional-repressor	MKSEQVETSNASSIVYEGTIALPLYDESEKQIGLTVVPDAINHEKSRAYKLNYETGFPELPQGCTIVVDSEETPVNNDFVYAKINGKSSAYRYLTRGPQNYLDVGDSRLGLVPIDERVEILGVIVFMARSFRR*	phrogs_hmm	hypothetical_protein	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0041	cloud	direct	high	402	1.0	GCA_009648895.1_00421
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	432289	432579	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	28795	29085	GCA_009648895_1_1_426	GCA_009648895_1_1_426	+	4408047	.	pfam06064	Host-nuclease inhibitor protein Gam. The Gam protein inhibits RecBCD nuclease and is found in both bacteria and bacteriophage.	MNAYFMHDRIEERAWQDHYIQIAREEEEAELADLYDRQIKFHHLHALLSNTQADKAALTATFDDVDFQEKAAEFLRYAAETLAAKQTAINMDLRRG*	mmseqs_cdd	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0042	cloud	direct	high	290	0.997	GCA_009648895.1_00422
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	432581	433681	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	29087	30187	GCA_009648895_1_1_427	GCA_009648895_1_1_427	+	4408047	.	PFAM:PF13479.5	AAA-domain-protein	MALFQRATNTQAFLKAGIMGFAGDGKTYTASELAIGLVLLMRQRGLEMGDKPVMFLDTETGSDWVKPRFDAENIELYTAKTRAFVHLLAAVNEAEQSGSVLIIDSISHFWTCLCDEYATRRKRKRGLEFSDWSWLKQEWRRFTDRFVNSQAHIIMCGRAGYEYDFFEGDDGKRQLEKTGIKMKAETETGYEPSILIQMEKQMDLESGQVWRTARILKDRSTRIDGQTFANPTFKHFLPHIEFLNLGGTHLGVDTSRDNGELFADDGLPTWQKEKRAREIALDEIVELLKKHHGGTSNDAKRAKADLLEQVFCSRSWERIKGMDWPTIKAARSALWLQLEGAPYEFPAPSGAEKSEPDAAYDEVIPQ*	common_virus_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0043	cloud	direct	high	1100	0.999	GCA_009648895.1_00423
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	433762	434013	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	30268	30519	GCA_009648895_1_1_428	GCA_009648895_1_1_428	+	4408047	.	pfam06806	Putative excisionase (DUF1233). This family consists of several putative phage excisionase proteins of around 80 residues in length.	MSEVVMIVSPGKWVAEEQLIALKGFKRGTLKRAREQSFLEGKEYIHVAPDGQPWDNSPCFYNLEEIDRWIERQAMAKPRRYIA*	mmseqs_cdd	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0044	cloud	direct	high	251	0.996	GCA_009648895.1_00424
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	434039	435322	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	30545	31828	GCA_009648895_1_1_429	GCA_009648895_1_1_429	+	4408047	.	PDB:1Z19_B	Integrase	MIEYPTGVENHGGKLRIWFIYKGVRVRENLGVPDSPKNRKKAGELRNAICYAIKTGTFDYAAQFPDSRHLARFGVAKPDIDFATISEKWLSLKEIDVCKNTYVRYAAAIKNVMPYIGADTLIASINQEFLLSLRRELLLGFQRPKHWHTEPIKGRTASTVNYYMLVINGILEFASHNDYIPVNPMRNITSLKRAKSEPDPLTKDEFERLIAACDNRQLKNLWSLAVFTGMRHGEICALAWEDVDLKAGTISVTRNYTAARNFTPPKTDAGTDRKIVLIDAAIAVLRDQAELTRLGKQHDISVALREYGKKRLDKCTFVFSPAVYTKNPHCGINYATGSLNQSWASAMRRAGIRHRKAYQSRHTYACWALSAGANPNFIAGQMGHANARMVYQVYGKWMSENDADQLSILNKSITVNAPTMPHSKTAY*	common_virus_hmm	common_virus	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0045	cloud	direct	high	1283	0.999	GCA_009648895.1_00425
GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote	cenote	CDS	435334	435990	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C14	31840	32496	GCA_009648895_1_1_430	GCA_009648895_1_1_430	-	4408047	.	3KWS_A	Putative sugar isomerase	MKIATQNQAFFPENILEKFRYIKAMGFDGYEIDGKLLVDNLAEVKAAIQETGLPVTSACGGYDGWIGDFIEERRLNGLSQITRILEALAEVGGKGIVVPAAWGMFTFRLPPMKSPRSLAGDRKAVSDSLRYLDEVAARTGTTVFLEPLNRYQDHMINTLADARRYIVEGGLKHVKIIGDFYHMNIEEDNLCKAFHDNRDLLGHVHIAEMISYKGKDID*	hhsuite_tools	nonviral_gene	C14	32496	403495	435991	GCA_009648895.1|CP045778.1@region_403496_435991@tool_cenote_CDS_0046	persistent	direct	high	656	0.998	GCA_009648895.1_00426
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	976758	977465	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	1	708	GCA_009648895_1_1_940	GCA_009648895_1_1_940	-	4408047	.	PRK10839	16S rRNA pseudouridine(516) synthase RsuA. 	MRLDKFIAQQLGVSRAIAGREIRASRVTVDGEIVKDSAFKLLADNDVEYDGNPLIQQNGPRYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAHKLHAAGRLDIDTTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAALFAKGVQLNNEKDLTKPAQLEVITPTEVRLTISEGRYHQVKRMFAAVGNHVVGLHRERIGAIELDPELAPGEYRPLTEDEIASVGMPSR*	mmseqs_cdd	nonviral_gene	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0001	persistent	direct	high	707	0.999	GCA_009648895.1_00962
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	977567	979396	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	810	2639	GCA_009648895_1_1_941	GCA_009648895_1_1_941	+	4408047	.	PDB:1RIF_B	DNA-helicase	MARSQDENDSWHNISVIPISAGPMSFTLRPYQREAVDATLNHFRRHDAPAAIVLPTGAGKSLVIAELARLARGRVLVLAHVKELVAQNHAKYLALGLEADIYAAGLARKESHGKVVFGSVQSVARNLDHFQGEFSLVIVDECHRISDDDDSQYQQILTHLRKQNPRLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQGNGLFSEADLNRELKQQQRITPHIVSQIVEFAADRRGAMIFAATVEHAREITDLLPAGEAALITGETPGRERDAIIEAFKAQQLRFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKKDCLILDYAGNPHDLYAPEVGAPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDEGHREQCDYRFRFKNCPHCNAENDIAARRCRECDKVLVDPDDMLKAALKLKDALVLRCGGMQLQPGADEKGEWLKVTYYDEDGADVSERFRLHTPAQRTAFEQLFIRPHTRTPGVPLRWITVNDIVAQQALLRHPDFVVARLKGQYWQVREKVFDYNGQFRRANELRG*	rep_hall_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0002	persistent	direct	moderate	1760	0.962	GCA_009648895.1_00963
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	979523	979807	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	2766	3050	GCA_009648895_1_1_942	GCA_009648895_1_1_942	+	4408047	.	PRK05943	50S ribosomal protein L25; Reviewed	MFTINAEVRKEQGKGASRRLRHANKFPAIVYGGTEAPVAIELDHDKVMNMQAKPEFYSEVLTLAIDGKEVKVKVQAVQRHPYKPKLHHIDFVRA*	mmseqs_cdd	nonviral_gene	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0003	persistent	direct	high	284	0.996	GCA_009648895.1_00964
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	979908	980912	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	3151	4155	GCA_009648895_1_1_943	GCA_009648895_1_1_943	-	4408047	.	PRK00378	nucleoid-associated protein NdpA; Validated	MSLDINQIALHQLIKRDEQNLELILRDSLLEPGNTVTEMMAELHRVYSAKSKAYGLFNEESELAEALRQCRRGDEDFLAFSRAATGRLRDELAKYPFAEGGIVLFCHYRYLAVEYLLVAVLNNLSSMRVNEQLDISTTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASVGLDTKAQNRGLLQALDDFTAEAQLDKAERQNVRAQVYSYCNEQLQAGEEIALSELSKELPSFGEKSFQEFTAEQGYELEETFPADRSTLRQLTKYAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGK*	mmseqs_cdd	nonviral_gene	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0004	persistent	direct	high	1004	0.999	GCA_009648895.1_00965
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	981047	981274	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	4290	4517	GCA_009648895_1_1_944	GCA_009648895_1_1_944	+	4408047	.	2JUW_B	UPF0352 protein SO_2176	MPQLSRYSDERVEELLTELASVLSKHKAPTDLSLMVLGNMVTNVINNSVAPAQRKTLARSFAEALQSSIRDDNAH*	hhsuite_tools	nonviral_gene	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0005	persistent	direct	high	227	0.996	GCA_009648895.1_00966
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	981294	983057	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	4537	6300	GCA_009648895_1_1_945	GCA_009648895_1_1_945	+	4408047	.	NF038282	LPS biosynthesis-modulating metalloenzyme YejM. YejM (LapC, PbgA) belongs to a regulatory system that controls the activity of LpxC, the enzyme that catalyzes the first committed step in the LPS synthesis. The earlier report (2015) by Dalebroux, et al (PMID: 25856753), which assigned a role in cardiolipin transport and introduced the name PbgA (phoPQ-barrier gene A), is no longer considered accurate.	MVTNRQRYREKVSQMISWGHWFALFNILFSIVLGSRYLFIADWPTTLTGRVYSYVSLVGHFSFLVFATYLLILFPLTFIVMSQRLMRFLSAILATIGMTLLLVDSEVFTRFHLHINPVVWQVVINPDQSEMARDWQLMFIAVPVILLIEMLFATWSWQKLRSLTRRRRYARPVAALFFASFVTTHVMYIWADANFYRPVTMQRANLPLSYPMTARRFLEKHGLLDAQEYQRRLVEQGDPEAVSVQYPLSDLRYSDMGSGHNVLLITVDGLNYSRFEKQMPSLAQFAHDNINFTQHFSSGNLADNGIFGLFYGISPGYMDGVLAARIPAALITALNQQGYQLGLFASDGFSSSLYRQALLSDFSLPSAQPQSDDQTASQWISWLNKYASEDNRWFSWVSFNGTNIDEDTQQAAFTRRYARAAGNVDTQIDRVLASLKASGKLDNTVVIITAGRGVPLGKQQESFGWDRSRIQVPLVIHWPGTPAQRVTKLTDHQDVMTTLMQRLLHVRTPAYEYSQGEDLFSPARRNNWVVSADNNTLAVTTPQMTLVLDNNGNYRMYDLRGERMKDDKPQLSLLLQVLTDEKRFIAN*	mmseqs_cdd	nonviral_gene	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0006	persistent	direct	high	1763	0.999	GCA_009648895.1_00967
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	983567	984148	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	6810	7391	GCA_009648895_1_1_946	GCA_009648895_1_1_946	-	4408047	.	PFAM:PF02413.16	tail-fibre-assembly-protein	MVFNSDGFAEQDFIQKVYIADISGEYIGTSEVMISRGTGLPAGAYLDAPPPLQEGKAIIRNANGSEWIITSDYRGKTAYSTDKSKTMIINEPGDIPDGFTLSGPPRAWEFWDGEKWLPDDKALKDIQQKEAVERKTMLMNEASNEISLLQDAVDLDMATEDETTRLLALKKFRVLLSRIDTTSAPDISWPIAP*	hallmark_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0007	shell	direct	high	581	0.998	GCA_009648895.1_00969
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	984148	985038	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	7391	8281	GCA_009648895_1_1_947	GCA_009648895_1_1_947	-	4408047	.	PDB:1OCY_A	Tail-fiber	MSAGTLSLTNKSATVSGTGTSFTTDLKAGDFIVVKIGGTPYTLPVKTITSNTQLTLVSNYTGPTQGGVAWFSVPQEAQSLITASLASQTAEALRGLNLDKTNWQQMFSGAGNITVTLSDGSSWTGPSLNSIKDMVDALSPVGSMLVWPSLNLPDNSTLGIKYLRLNGAPFDKTLYPKLASIYTTGVLPDMRANVVRGFDDGRGVDQGRAMLSEQLDAAPNIVGSFAPSVDSRGFGTGAITCAGGVAAAYTTTSDTTFLRSVTATIDASKSSPSYGRGNSAEVRMRNIVWNMIVRAS*	hallmark_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0008	shell	direct	high	890	0.999	GCA_009648895.1_00970
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	985086	985736	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	8329	8979	GCA_009648895_1_1_948	GCA_009648895_1_1_948	-	4408047	.	.	hypothetical protein	MSGFEVRNSAGALTVNSDYKSPLLASSAAASTDTVGDFDLNIPGFGNLNQLGYVLDDNLYSPGQLAWFRLNVNGWGVPGARYFLPGSVFIAKTKIDLAVESGYLDVFNAQGTLIWSAKSAAKMPRVLGFITIPPNYDLQNNTLTVGVSGTPFYLMDIIPGALAEDQEGVGAKNGIVMKQQSGSVILRYINQNGKNYVNTPLYSRGFKIPYAVFPTV*	.	hypothetical_protein	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0009	cloud	direct	high	650	0.998	GCA_009648895.1_00971
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	985733	985963	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	8976	9206	GCA_009648895_1_1_949	GCA_009648895_1_1_949	-	4408047	.	.	hypothetical protein	MVRYIGRTVVNAPAGISQMNVPYAGLTASGSFAAIVKLTGVVRIWSTSCYDGGFTLYFVPGTSYADTITVDLYNFL*	.	hypothetical_protein	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0010	cloud	ambiguous	low	5	0.022	GCA_009648895.1_00971
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	986023	989184	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	9266	12427	GCA_009648895_1_1_950	GCA_009648895_1_1_950	-	4408047	.	PFAM:PF13550.5	tail-protein	MEKITGKKGGGGNSRTPRESPDSLQSIATAKILLALGEGEFAGGLTDKDIFLDGTPIRSADGTLNFPDVKWEFRPGTQTQDYIPGIPSVENEITINTQLKATQPWTRAISNTQLSAVRVRLGVPSLQRMKDNGDVVGYRVEYKIELSTDGGGYVTVLNSAFDGKTTSLYERSHRIDLPPARTGWQLRVSRTTADSTSSRIVDTTNIEAYSEIIDAKLRYPNTALLFVSFNAKQFSNIPQISVRARGRQIRVPTTYDPVARTYSGTWDGSFKWAWSNNPAWVFYDLVLSDRFGIGDRLDATQVDKWELYRIAQYCDQPVPDGTGGSGTEPRFLCDVYIQSQNEAFTVLRDLASIFRGMTYWAGNQLAALADMPRDMTYVYTRANVIDGKFSYASGSEKNRYSTAMVSWSNPENHYTDEVEAVMEPDLVRRYGVRQTQIAAIGCTRRTEANRRGRWALLTNAKDRMVSFATGLEGMIPLPGHIIGVADQYLSGRVMGGRISQVNGRALTLDRVPDAKAGDRLIVNLPSGKSQARTLQAVSGRNVTVSAVFSETPEREAVWSVDAQDVAIQQYRVTSVEDNNDGTWTISAVQHNPDKYAAIDSGARLDERPVSAIPPGVQAPPASVTLSSYSRVVQGLSVETLRVAWPAAPGAVAYECQWRKDNGDWVNVPRTSSLGFEVQGIYAGRYMARVSAVNASDVASVWQTSVEVTLTGKVGQPPVPLNFRTTPINWGIQLDWNFPDGADDTLMTEIQYAAASDGSDALLLSDVPYPAHSYTQLGLRAGQIFWYRARLVDRIGNQSAWTGWVRGMANDNAEDYLGDITGDFLTSADGQALQQQIDTNIEAVMQNALANNATADHQWKLYGEVRADILVVKTTIADVDKALADMSTQVQAQIGSVTAALEDKLTAVVDASGATAIHTLKAGVRINGDYYSAGMSIAVLAQAGQPVVTRIAFNADQFVLTTGSGASQFSPFAVVGGQVFMNSAFIQDGTITSAKIGAFIQSNNYVAGSTGWRLGKDGNFEINGVAGGGKMLITSTLVQIWDSNNILRIRMGLF*	hallmark_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0011	persistent	direct	high	3161	1.0	GCA_009648895.1_00972
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	989234	989830	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	12477	13073	GCA_009648895_1_1_951	GCA_009648895_1_1_951	-	4408047	.	PFAM:PF06805.11	tail-assembly-protein-I	MNELKTVRLYGALGARFGRVHRLVIASPAEACRALSVILPGFEQYMQTAHLRGLRFAVFRGKKNIGQDELKHNSGEEDIRIAPVIAGSKRGGVLQTILGAVLVVGALALGPVGIGTIAGSTAMSIGLMGGSMMIGGVVQMLSPQPGGLASRQDPDNAPSYAFGGPVNTTAMGNPVGLLYGEREIGGAIVSAGIYTNDQ*	hallmark_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0012	persistent	direct	high	596	0.998	GCA_009648895.1_00973
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	989827	990531	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	13070	13774	GCA_009648895_1_1_952	GCA_009648895_1_1_952	-	4408047	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MRDKTIADILAHAEAEYPRECCGVVAQKSRVERYFPCRNITGAPEEQFELSPEDYAAAEDWGTVTAIVHSHPGDGATTQPSELDQLQCDAHGIPWVIVSWPEGDLRTIAPRGERRLEGRAFELGYADCWSLVMDWHRQQGVTLRNYSVDYPWWERGENLYMDNWYAEGFREVTDPRPGDMVLMQVSAPVVNHAGILLEGNQLLHHLYGQLSCTTPYGGYLRERTIKIVRHKDLP*	mmseqs_cdd	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0013	persistent	direct	high	704	0.999	GCA_009648895.1_00974
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	990534	991286	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	13777	14529	GCA_009648895_1_1_953	GCA_009648895_1_1_953	-	4408047	.	PFAM:PF05100.11	minor-tail-protein-	MAISNDVQKLEPGDSVRLVTVDGSAFGAGVLRFHACTIPHTPEEIAASGGDTSKLAAKSIWFDDDEYGAWPFEITGLASSSDGQSAEPVLRIANLDGVVTALCLRFDDMVQAKVTVLDTFGQYLDARTFPDGNPSADPGQYFRQVFYIDSKAAEDNEVVEFRLSSPMGLQGLLIPTRQITAVCTWACRNKYRSGDGCTYNGPRMFDMKGNPVTDPAQDKCSGLLTDCKKRFGADAQLDFGGFPGASLIRR*	hallmark_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0014	persistent	direct	high	752	0.999	GCA_009648895.1_00975
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	991293	991631	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	14536	14874	GCA_009648895_1_1_954	GCA_009648895_1_1_954	-	4408047	.	PFAM:PF05939.12	minor-tail-protein	MATETFTWCPRINAGGEVTHRVRRAQFGDGYAQASGDGINARSQKWDLEFVGDESYITAIMDFLDRHGGSRSFIWQAPLKGVGLYRCDAYRPSAPGGGIFSLTATFTQAFAP*	hallmark_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0015	persistent	direct	high	338	0.997	GCA_009648895.1_00976
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	991677	995126	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	14920	18369	GCA_009648895_1_1_955	GCA_009648895_1_1_955	-	4408047	.	PFAM:PF06120.10	Tail-length-tape-measure-protein	MGQDYYRTMQNGGRQAAAAARESEQALSELTNGFASAGRAAAAATAAFATGKIVQIADEWTSVNARLKQASSSTDDFTNSQMQLMQISQRTGTAFTDNANLFARAAASMREFGYNSEDVLRVTEAVSTGLKISGASAEESGSVITQFSQALAQGVLRGEEFNAVNESGDRVVRALAAGMGVARKDLKAMADQGQLTIDKVVPAMISQLDTLRGEFGSMPQTVSGSMQKVTNSFMAWVGGVNQATGATDALSGGLNGLAGALDGITRSGVSGALDDVADNMSTITTVAGGLIGVGLAKYLGGIVSSATGATTSLISAAKAEVALAVAQDKAAQSSVAASRADVYRAQQALQAARGADVQAAQQEKIAAAEAKVTAAQTRLNAALAGGTATEKVRARAALERAQSGLAAAKNADVQTAAEKRLAAAQAALNRNLAGRVTTQNNLNSVTAVGTRLLGGAMGLIGGVPGLVMLGAGAWYALYQNQEQARQSARDYAGTIEEIRNKTREMSLPEATDNESKTREALKEQNRLISDQETKIRSIKDAISGYQQMLANPGVTINGYMVNHLTSMDEATTELANSTDALAVEQERLSQMQAKSNEIQSVLEGLEHRRVDLIRQQAAEQNKVYQSLLIMNGEHAEFNRLLGLGNNLLAARQGLANIPMRIPQADSTQQQKDALEKSRRDLELSRLKGEAKEIARLGYVADDLGLTTDPQYQNNRQALINIGLETWRNNEANKPQKKGPKTEAEKTEDIYKRLIKQQQEQIALAGQSTELAKVKYQVSQGELATLSQAQKAEVMRNASLIDQVKLREQLRAYEANLADSNASARAANQADLIGFGQGSRFRQRAQEMLNIRKDFEQKNVELQRQYQGGDITEDLYQKELALNKQYLAERLRDQQDFYVASDAQRGDWVGGMREGFADWADNASDYASQSAELVSSSMDSALDNVTAMLVGNKASWKDWGLSVLQTISKVALQMAVVNAMGGGSSGSGLFGSLLGGIAGGIAGGAAGDTNAGTAIQNYGASFQFNAKGGVYSSADLSSYSGSVVDTPTFFAFAKGAGVMGEAGPEAIMPLTRDATGRLGVKALGSGTQGGAGVSLSIGTINFSGGTGGAQGNTNAAGAVANQLTGAIIDTINTQLRKPGTPLWNATQGKR*	hallmark_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0016	cloud	direct	moderate	2082	0.603	GCA_009648895.1_00977
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	995268	995606	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	18511	18849	GCA_009648895_1_1_956	GCA_009648895_1_1_956	-	4408047	.	2AQC_A	aNop10, Zinc-Ribbon, RNA BINDING PROTEIN	MEFFLAAIVLGIIPALIAQSKGRSFIGWWIYGFLLFIVALVHSLIIKKDSQTIEKEMIDDGMRKCPFCAEMVRKEAIKCKHCGSDISGSESVNLNKSDDDYLEEARKKAGLL*	hhsuite_tools	hypothetical_protein	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0017	cloud	direct	high	338	0.997	GCA_009648895.1_00978
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	995698	995967	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	18941	19210	GCA_009648895_1_1_957	GCA_009648895_1_1_957	-	4408047	.	PFAM:PF06223.11	tail-protein	MTLALRLGRTLDELKQTLTASELRMWIEFDRLNPISDRRGDIQSAQISAAVLNSQGAKVSMDDVLLQWNAQAQEEDSAGLEGFFAALAG*	phrogs_hmm	hypothetical_protein	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0018	shell	direct	high	269	0.996	GCA_009648895.1_00979
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	995991	996386	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	19234	19629	GCA_009648895_1_1_958	GCA_009648895_1_1_958	-	4408047	.	pfam06222	Phage tail assembly chaperone. 	MGKQVSQSSLRSLALAPMAGFRTKTVTVPEWENARVKLREPSAQAWLEWQQVLNPKQGEGEPEELTAAERALRNKSADVVLFIDVLLEEDGSQVFTEEDKAQVEQFYGPVHARLLKQALDLTTSAADVEKP*	mmseqs_cdd	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0019	shell	direct	high	395	0.997	GCA_009648895.1_00980
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	996437	996892	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	19680	20135	GCA_009648895_1_1_959	GCA_009648895_1_1_959	-	4408047	.	PFAM:PF16463.4	Tail-tube-protein	MSSKYEKTQGTKINVSADPATVPNPTGATWQSINCSTKELSYTGGQKSDIDTTTLCSTEQEMTNGLAAPGEMTVSGNWSADEEGQNTLRTAYDTDALHAFQVIFPSGNGYAFLAEVRQNSWSLGTAGVVTASFTLRIKGKPVPIVPAPSAG*	hallmark_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0020	cloud	direct	high	455	0.998	GCA_009648895.1_00981
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	996940	997269	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	20183	20512	GCA_009648895_1_1_960	GCA_009648895_1_1_960	-	4408047	.	PFAM:PF05657.10	tail-component	MTEADIYARLGALAGGNVFPFVAPQGTAAPWVVFLLPSSASEDVLCGPAETACTVQVDAWASSIDDARTLREQVKSALTDLHPVGLNEINAYEPDTALYRATLEVQIWQ*	hallmark_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0021	cloud	direct	high	329	0.997	GCA_009648895.1_00982
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	997266	997715	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	20509	20958	GCA_009648895_1_1_961	GCA_009648895_1_1_961	-	4408047	.	PFAM:PF04883.11	tail-component	MISTSLDFSGLADIAKDLETLSRAENNKVLRDATRAGAEVLKEEVEKRAPVRTGKLKKNVVVVTQKGRRRGEISSGVHIRGRNMRTNNSDNSMKASDPRNAFYWRFVELGTSAMPAHPFVRPAFDTRQEEATQVAIRRMNQAIDEVLAK*	hallmark_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0022	shell	direct	high	449	0.998	GCA_009648895.1_00983
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	997712	998053	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	20955	21296	GCA_009648895_1_1_962	GCA_009648895_1_1_962	-	4408047	.	CDD:pfam05521	Head-Tail-Connector-protein	MKAGRLRHRVILQKPATGRLPSGQPATGWVDVASVRAEVADVSGREMMDGGAELSSTTTRIWMRRYPGIPVTTGWRAVHLPPTGGGEIYDIKSAISAENGTRLELLCEKGVKQ*	hallmark_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0023	shell	ambiguous	low	5	0.015	GCA_009648895.1_00983
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	998050	998376	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	21293	21619	GCA_009648895_1_1_963	GCA_009648895_1_1_963	-	4408047	.	PFAM:3JVO_G	Head-Tail-Connector-protein	MLTKEQVKHHCNIEPDFTEDDNWIENSIKAAARYVETWTRRRLYEKADDPLYMADPDALLYGEDVEMAMLMLIAHWYTNRETVSTGSTTSALAFSTEALLQPYRIYGL*	hallmark_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0024	cloud	direct	high	326	0.997	GCA_009648895.1_00984
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	998386	998568	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	21629	21811	GCA_009648895_1_1_964	GCA_009648895_1_1_964	-	4408047	.	.	hypothetical protein	MKLIAIKPIYFEGNVLTEGTEFETLEQHGRDLVARGYAQEPGKKPDPEKDPEPKGKGKAK*	.	hypothetical_protein	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0025	cloud	direct	high	182	0.995	GCA_009648895.1_00985
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	998622	999842	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	21865	23085	GCA_009648895_1_1_965	GCA_009648895_1_1_965	-	4408047	.	PDB:1IF0_A	Major-Capsid-Protein	MSEVNEILKKVSASIEEATGKFNAKAEEALKEAQKTGKLSAETKETVDKMASEFNALKEAEKTLKAALGELEQQVAQMPLANAAKVVETVGQTVINSEALKAFAASVEGGKRVSVPVNAALISTDVATGVVEPQRLPGIDTAPKQRLFIRDLIAPGRTSAPAIFWVQQTGFTNAAKVVPEGTAKPYSDIKFATQITPVTTIAHMFKASKQILDDFAQLQSTIDAEMRYGLKYVEEQEILFGDGTGAHLKGIVPQASAFSAAFEVEKQNGIDVLRLAMLQAQLARFPASGHVLHFIDWAKIELTKDSLGRYILANPAALSGPTLWGLPVVATEAAAFQGKFLTGAFNAAAQLFDREDANVVISTENADDFEKNMISIRCEERLALAVKRPEAFIYGSFTAPAAGGGA*	hallmark_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0026	cloud	direct	high	1220	0.999	GCA_009648895.1_00986
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	999856	1000710	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	23099	23953	GCA_009648895_1_1_966	GCA_009648895_1_1_966	-	4408047	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MTIKSLPAAPEGRPFAREKPDLPAAAMERWNGSIRAARDGDNSISIFDVIGADYWGEGVTASRIAGALRSLNGADVTVNINSPGGDMFEGLAIYNLLREYDGKVTVKVLGLAASAASIIAMAGDEVQIGRGAFLMIHNCWVYAMGNRHDLAQIAADMAPFDKAMSDIYQARSGLDAETVDRMMDGETYIGGSEAVEKGFADSLLSADEIADDDESPAAALRKLDALLAKANTPRSERRKLLKALSGSTPGAAASPDGTPSAATIHKETIDRLEAALSGLTAAAQ*	common_virus_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0027	cloud	direct	high	854	0.999	GCA_009648895.1_00987
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1000719	1002023	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	23962	25266	GCA_009648895_1_1_967	GCA_009648895_1_1_967	-	4408047	.	PDB:8CEZ_K	Portal-Protein	MKKNKQPGRVKSALLNWLGVPISLTNGTFWQEWYGTSSSGKVVTADKAIQLSAVWACVRLLSESISTLPLKIYERQPDGSRRLAQQNQVYQVLCRRPNLEMTPSRFMLMLVASICLRGNAFVEKLFIGNKLVSLVPLLPQNMVVKRLDTGRLEYTYTENGTARVIAEKNLMHIRGFGLDGVCGMMPLSSGRDVIGAAMAVEESAAKIFENGLQSSGFLSADMPLDKEQRERLRSYMAQFTSSKNAGKIMVLEGGLKYQNVTMNPEAAQMLETRSFGIEEICRWFRVPPFMVGHTSKQSSWASSLEGMNLQFLTHTLRPLLVNIEQEISRCLLNGEEDIFAEFSVEGLLRADSAGRAAYYTSALQNGWMSRNDVRRLENLPPIEGGDIYTVQLNLTPLEDLKKNSPAVQAAALRQLHSHVFPDIPFEQSPLKQAA*	hallmark_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0028	cloud	direct	high	1304	0.999	GCA_009648895.1_00988
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1002023	1003780	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	25266	27023	GCA_009648895_1_1_968	GCA_009648895_1_1_968	-	4408047	.	PFAM:PF03354.14	Large-Terminase	MAKVADGIRYAERVVAGEIIACEYVRLACQRFLDDLQNGEARGIFFSEPRAQHILNFYKFIPHVKGAQAGQPIALMDWHVFILINIYGFVIPLVDEETHKVVLRNDGSGRPVMVRRFRTAYNEVARKNAKSTLSSGIGLYMTGADGEGGAEVYSAATTRDQARIVFEDAKNMVKKAKPTLGRLFEFNKLAIYQEQSASKFEPLSSDANNLDGLNIHCGIVDELHAHKTRDVWDVLETATGARLQSLLFGITTAGFNKEGICYELRDYAIKVLRGFNSEVEGAVKDDTFFAIIYTLDDGDDPFDETVWQKANPGLGICKRWDDLRRLAKKAKEQVSARVNFFTKHMNIWVTAESSWMDMLKWEKCEFIAPAHELKTYPLWVGVDLANKIDICAAVKAWRSPDGHVHADFKFWLPEGRLEKCSRQMAELYRKWAELDKLILTDGDVIDHAQIKEELQQWVSGESLKEIGFDPWSATQFSLALAEEGLPLVEVPQTVRNFSEAMKEVEALVYGGRFHHSNHPVMNWMMSNVTVKPDRNDNIFPNKSTPEAKIDGPAALFTAMSRLLVNGGNDQQDLSGFFDNPIMVGF*	hallmark_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0029	cloud	direct	high	1757	0.999	GCA_009648895.1_00989
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1003780	1004253	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	27023	27496	GCA_009648895_1_1_969	GCA_009648895_1_1_969	-	4408047	.	CDD:TIGR01558	phage-terminase,-small-subunit,-putative,-P27-family	MSGPPKTPTHLRLVRGNPSKRPINKDEPQPPAGVPPTPKHFDKQAKYWFKRMAEELDAIGVISQLDARALELLVEAYTEYRHHCDTLEIEGYTYRTETQTGDVLIKAHPAAMMKADAWKRLRAMLAEFGMTPASRSKVSAKTPDAVDPLAEFMKARD*	hallmark_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0030	cloud	direct	high	473	0.998	GCA_009648895.1_00990
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1004416	1004634	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	27659	27877	GCA_009648895_1_1_970	GCA_009648895_1_1_970	-	4408047	.	.	hypothetical protein	MKHKKVQLAHIYRGSVFLGYGIAVDGVLLSQQLNTKIDTDAASIPAITAVFNLDAEMNENPVRIDLNAIGSQ*	.	hypothetical_protein	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0031	cloud	direct	high	218	0.995	GCA_009648895.1_00991
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1004631	1004981	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	27874	28224	GCA_009648895_1_1_971	GCA_009648895_1_1_971	-	4408047	.	PDB:5H0M_A	HNH-endonuclease	MPSAIPRACRKRGCPGTTTDRSGYCEAHRNEGWQQHQRGLSRHQRGYGSKWDIIRARILKRDRHICQECLRNGRPVPATTVDHIKPKAHGGTDDDSNLRSLCWPCHKAKTAKERIK*	common_virus_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0032	cloud	direct	high	350	0.997	GCA_009648895.1_00992
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1005504	1005968	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	28747	29211	GCA_009648895_1_1_972	GCA_009648895_1_1_972	-	4408047	.	pfam03245	Bacteriophage Rz lysis protein. This protein is involved in host lysis. This family is not considered to be a peptidase according to the MEROPs database. This family Rz and the Rz1 protein (pfam06085) represent a unique example of two genes located in different reading frames in the same nucleotide sequence, which encode different proteins that are both required in the same physiological pathway.	MAALWGFVRAWWKPLLFLAAVGFALYYRASLTKAEASLTKVNHELKLAKDDIEDMQRRQRDVATLDAKYTKDLADAQKNIAQLERDVAAGRKRLQLNATCSAQGAPGTTRVDDGASPRLTDAAERDYFTLMERIETVTRQLSGLQAYVREQCLR*	mmseqs_cdd	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0033	shell	direct	high	464	0.998	GCA_009648895.1_00993
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1005968	1006591	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	29211	29834	GCA_009648895_1_1_973	GCA_009648895_1_1_973	-	4408047	.	PDB:3WH1_A	Chitinase-	MNQQQFQQAAGLSAGLAARWFPHINAAMREYGITAPVDQAMFIAQVGHESTGFTRLVESFNYSIAGLNGFVRAGRLTQDQANMLGRRTYEKVLPLERQRAIANLVYSKRLGNNASGDGWKYRGRGLIHITGLENYRDCGAALKLDLVSTPELLSEDVTAARSAAWFYTSKGCLKYPGDLLRVTQIINGGQNGLEDRQARYAAARRVL*	common_virus_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0034	persistent	direct	high	623	0.998	GCA_009648895.1_00994
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1006588	1006872	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	29831	30115	GCA_009648895_1_1_974	GCA_009648895_1_1_974	-	4408047	.	pfam05449	Putative 3TM holin, Phage_holin_3. This is a family of putative proteobacterial phage three-transmembrane-domain holins.	MVISDPLVLTNVATCSAIVLRLMLFRKPGARHRWWASWLAYLIILAYASVPFRYAFDFYVHTHWASVIINLIICAAVFRARGNVARLFHVLRPE*	mmseqs_cdd	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0035	persistent	direct	high	284	0.996	GCA_009648895.1_00995
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1006859	1007239	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	30102	30482	GCA_009648895_1_1_975	GCA_009648895_1_1_975	-	4408047	.	pfam16931	Putative phage holin. 	MSDPVSGTVAAGAALTGASIYGLLTGTDYGVIFGAFAGAVFYVATAADLTLIRRAAYFVVSYIAGVYGAGLVGSKLASWTEYSDKPLDALGAVILSALTIKILTFASQQDPAQWFQRWRGGANGNK*	mmseqs_cdd	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0036	persistent	direct	high	380	0.997	GCA_009648895.1_00996
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1007449	1008534	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	30692	31777	GCA_009648895_1_1_976	GCA_009648895_1_1_976	+	4408047	.	PF04245.13	37-kD nucleoid-associated bacterial protein	MAVAGFTFEGICIDYVIAHRIFPRAASKTMKPAKISKNILSINDEAMDALQQRITEALAARSHGVEMSILPGVADSFLNLSASTFHSDKETFITVSQRLAAKLTESQFESGAPGGILINVQGVIGENECPFFAVIKAETQTGFSTNENEEQVTIEFLNELLLTPSQRFFKIGFIVELLQSSPDKDGNYDPANFRAFLFDHLMTSTNINKAASYFYNRFLGMDISKSTKKLTQDFYETTSDFINNAKINEDEKLNLHEALRAELRSKKQTVSIHDFADTYLPEEIRDSYKQVMKEHKLPQNSFHKDNEYISTKLKRRSRLIFSNDIWISVPPENFRDLVEILPSNDHNFTLLKINGKLMSKL*	hhsuite_tools	hypothetical_protein	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0037	cloud	direct	high	1085	0.999	GCA_009648895.1_00997
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1008531	1009523	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	31774	32766	GCA_009648895_1_1_977	GCA_009648895_1_1_977	+	4408047	.	COG2357	ppGpp synthetase catalytic domain (RelA/SpoT-type nucleotidyltranferase)  [Nucleotide transport and metabolism, Signal transduction mechanisms]. 	MNVFDDFKDFLESQQDAFKAWGSYVQKRIEEGIRVFLNSENINNYLKIPVTPRLKEIESALGKVARKGYDNPREQMTDLVGIRFVVLLSENINEICNVLEKIDEFNATVSKNYLEEIDLNPKIFDYQSKHYEVRPRNTFELEGIVIDKSICCEVQIRTLLQHAYAELVHDNIYKPVGPVPKTAERQIARSMALMETTDDLFCVTMKLLHQTNLKRNDFLNSLKNIYNELVGDGYSRADEDTNLCVLDAFRDHFTEETATEIRHLIGKKPFIKRKIRQRADRIGLFCQPVVLFVYLVANNSQLDKLLASWPLPGYISELNLILSDLGISTI*	mmseqs_cdd	nonviral_gene	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0038	cloud	direct	high	992	0.999	GCA_009648895.1_00998
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1009520	1009888	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	32763	33131	GCA_009648895_1_1_978	GCA_009648895_1_1_978	-	4408047	.	pfam06530	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.	MYDIYEVMNRWGAWAASEHTGVDWQPIAAGFKGLLPYSKKARICCNDDEGIMIDGCVARLRKYKPHEHELIVAHFILGISLRKIARKRKHSDGTIRKELQMALGFIEGMLCVLKNHYSHTEL*	mmseqs_cdd	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0039	cloud	ambiguous	low	5	0.014	GCA_009648895.1_00998
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1009906	1010955	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	33149	34198	GCA_009648895_1_1_979	GCA_009648895_1_1_979	-	4408047	.	pfam06147	Protein of unknown function (DUF968). Family of uncharacterized prophage proteins found in Gammaproteobacteria. These may be HNH-nucleases, as there are several conserved cysteines and histidines.	MRALLTSEIARGMGIVLLRPGPELMPIFANGRVLVEVQPESMARFPSGAVPPAHQPLADDEGLQVFFTDERVIRTAGGINALEHWLMKQQGGCQWPHSEYHHHELTTMRHEPGALRLCWHCDNQLAEHFTERLSAIARSNVIAWIISVARGSLAFDDTHELTLPELCWWAVRMDITDALPDSVARRALRLPPLPVEGVSRESDIVPGPSAAEMVQTKAQRACAVKTRMNCDKPQEQQTQVVALMIDPESPESYMLRPKRRRWENEKYTRWVKQQPCACCNQRADDPHHLIGHGQGGMGTKAHDLFVLPLCRRHHDELHRDTVAFEEKYGSQLELIFHFLDRALALGVLA*	mmseqs_cdd	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0040	shell	direct	moderate	1014	0.966	GCA_009648895.1_00999
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1010952	1011677	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	34195	34920	GCA_009648895_1_1_980	GCA_009648895_1_1_980	-	4408047	.	PFAM:PF03374.13	KilA-protein	MNQTHPISFCPRHHAALAGQELFMSSREIASLVGSRHTDVCSAIERLIKKSVIDGYTALPYTHPQNRQEYHHYLVNKRDSYVIVAQLCPEFTARLVDRWQELESGQQMSVPRSLPEALRLAADLAEQKERLTQELAAAAPKVEFVDRYCSASGSLSFRQVAKLLKAKETDFRLFLIDNEIMYRLGGVLTPRHQHIDAGRFEVKTGTSTTSNHAFSQARFTAKGVKWIGGLWAEHVAKGNAA*	common_virus_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0041	shell	direct	moderate	657	0.905	GCA_009648895.1_01000
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1011693	1012076	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	34936	35319	GCA_009648895_1_1_981	GCA_009648895_1_1_981	-	4408047	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MKLTLPFPPSVNSYWRAPTKGPLKGRHLVSADGRKYQSNAAAAVVEQLRRIPKPVTGLLAVEVVLYPPDRKRRDLDNYLKALFDALTLAHVWEDDSQVKKMLVEWGPVTSKGKVEITISNFVAGAAA*	common_virus_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0042	shell	direct	high	383	0.997	GCA_009648895.1_01001
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1012073	1012402	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	35316	35645	GCA_009648895_1_1_982	GCA_009648895_1_1_982	-	4408047	.	pfam01726	LexA DNA binding domain. This is the DNA binding domain of the LexA SOS regulon repressor which prevents expression of DNA repair proteins. The aligned region contains a variant form of the helix-turn-helix DNA binding motif. This domain is found associated with pfam00717 the auto-proteolytic domain of LexA EC:3.4.21.88.	MNFTSALTVRQQEVLDMLADFQRRNGYPPTQKEVAQLMGAASPNAATDMLRKLEKKGAISVSRGVARGITINGIAKEDEAVSLLRAMVEGEAKSRDRAVAFLKARGAIA*	mmseqs_cdd	nonviral_gene	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0043	shell	direct	high	329	0.997	GCA_009648895.1_01002
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1012399	1013577	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	35642	36820	GCA_009648895_1_1_983	GCA_009648895_1_1_983	-	4408047	.	PFAM:PF05869.10	Adenine-specific-DNA-methyltransferase	MHPLNAYSQALAALRSKPAHELKEVGDQWRTPDNIFWGINAMFGPLVLDLFSDGENAKCEAYYTAEDNALTQDWSARLAELNGAAFGNPPYSRASRHDGDYITGMRYIMQHASAMREKGGRYVFLIKAATSEVWWPEDADHVAFIRGRIGFDLPSWFVPKDEKQIPSGAFFAGAIVVFDKTWRGPAMSYISRNELEARGDAFIAQIRRQAERLLMSNRQESDEDETDLHSETEQQLQAAETELPLTAADILERSGVEVWACACAAFGSKEAYAFHESRFAHSWAADSVENPMLVTVTADVISRAQSLIKEHINGVKLRAFMDLNDFVFQDDAERKDMHERLATVAREAEEQHGLAMDEFLLVVGAIDTTHWRNIRQLRASIREMAGAREKAA*	common_virus_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0044	shell	direct	high	1178	0.999	GCA_009648895.1_01003
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1013577	1013813	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	36820	37056	GCA_009648895_1_1_984	GCA_009648895_1_1_984	-	4408047	.	PFAM:PF14557.5	transcriptional-activator	MTNEKLKHEVFEELACQLERQNLWRRAAHVYLAAFDASKSNRDRERLAKKRTQCLKMSNRVGYVEGRCYLAGNYVGEL*	phrogs_hmm	hypothetical_protein	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0045	shell	direct	high	236	0.996	GCA_009648895.1_01004
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1013810	1014706	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	37053	37949	GCA_009648895_1_1_985	GCA_009648895_1_1_985	-	4408047	.	PFAM:PF04492.12	Replication-protein-O	MSVKLSAYVWDGCASAGIKGTKLLILARLADFSSDEGISWPSVDTIARQIGAGRSTVITAVGELERDGWLTRKERRQGQRSGTNIYTLNVPRLRQAAAGAYSQGPVSEHSESGRSESEGSEAGRPESERPENRKNGASQGPESGHDPSVTSKQEPSDKKPSRQVVGQPDAEQLITDKAIAVLKHLNLVTGARYQNSKSSLENIRARLREGHSVDDLQLVVDYKHEHWHDTEMYDYMRPQTLFVPGKLEGYLLSATRWKERGRPSRQQWKQRSVQRDDSAFKASYAGVDYSQVPEGFRS*	rep_hall_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0046	shell	direct	high	896	0.999	GCA_009648895.1_01005
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1014696	1015040	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	37939	38283	GCA_009648895_1_1_986	GCA_009648895_1_1_986	-	4408047	.	.	hypothetical protein	MNSLTVNNRLPQLRAIPVQGTSSFRYERMVSGRWVPCNHSRVRLIVGAFNRKAKNLVCRSSTDDTATGGELKSMSPVTTPKSDRLSSGARVTRTTACSLLSGSARSSKGWIHER*	.	hypothetical_protein	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0047	shell	ambiguous	low	12	0.035	GCA_009648895.1_01005
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1015037	1015588	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	38280	38831	GCA_009648895_1_1_987	GCA_009648895_1_1_987	-	4408047	.	PFAM:PF06892.10	CII-like-transcriptional-activator	MGNEHWQVEKQPAWLVAAIKKTISGLHGGYAEAADWLGVTEDALFNRLRTGGDQIFPMGWAMVLQQASGTKHIADAVSRHSNSVNVPLVDIEDVDNADINQRLMESIEWIGKHSTYIRKATADGVIDQAERAQIEENSYQVMQKWQEHLTLLYRVFCSPEKSDARECAAPGAVACRISGETNA*	phrogs_hmm	nonviral_gene	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0048	shell	direct	high	551	0.998	GCA_009648895.1_01006
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1015639	1015860	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	38882	39103	GCA_009648895_1_1_988	GCA_009648895_1_1_988	-	4408047	.	pfam15943	Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	MTPEQSALTEAIEIAGGQSELARKISLEAGGLVKQQQVWNWLHREKKAPIKHTVSIEKLTGVPKEKLRPDVFR*	mmseqs_cdd	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0049	.	unmatched_CDS	none	0	0	.
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1015996	1016685	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	39239	39928	GCA_009648895_1_1_989	GCA_009648895_1_1_989	+	4408047	.	PDB:2FJR_A	Repressor-protein-CI	MGTLAERLKKAREKAGLSQLQLAEQVGLTQQSIAKIENGVTEQPRKIKQLALALGVTANWLQYGDIDANGSYSEMIVKEWESTSADPDLFTEIPILDIELSAGNGCEAEIVESELSTYPLRRDELRRAGVSASSARIVNILGSSLYPVLTNGDKVAVDLSQTSPIRDGDLYALRDGVLLRVKILINRPDGGLILRSFNKDEYPDEVLTYEEKLARIHVIGRVFWSSRSW*	common_virus_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0050	shell	direct	high	689	0.999	GCA_009648895.1_01007
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1016677	1017555	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	39920	40798	GCA_009648895_1_1_990	GCA_009648895_1_1_990	-	4408047	.	cd17748	BRCT domain of bacterial NAD-dependent DNA ligase (LigA) and similar proteins. LigA, also called NAD(+)-dependent polydeoxyribonucleotide synthase, catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. The Trp-X-X-X-Cys/Ser signature motif of the BRCT family is not conserved in this family.	MEEKQQVFNYTRNRDKLFANLISIIDGILSDGNLTDQEIIYLDTWLLEADQLIGNGIIKSLRIRIASILDDGVITAEEREELKQYLHEVQSEILDIPEIDFYSTESDLHLLNGLCKGLISDRVLSQEEIKYLDWWLTQNGALKANYPGKELYRLVKDILSDGEITIQESEVLHKALIDFTGCDLDSGTVDGLATRLPVDDIADVKVSGKAFCLTGIFLAGKRSAIEDLIQKQGGTISSGVTKKIDYLVIGTLSSRDWRFSSHGRKIEKAVTYRDDGAQIKIITEEMLIEALP*	mmseqs_cdd	nonviral_gene	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0051	shell	direct	high	878	0.999	GCA_009648895.1_01008
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1017717	1018043	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	40960	41286	GCA_009648895_1_1_991	GCA_009648895_1_1_991	+	4408047	.	.	hypothetical protein	MQFDKEKVFKTFNLPREEFSALEARPNAHAGNRIELFVNGALTQTLNTESAVTADYLMFMGGVVEAMEKDKTSLESEANKSGRTLATGFRGIGSVPLESVGVPEVLDK*	.	hypothetical_protein	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0052	shell	direct	high	326	0.997	GCA_009648895.1_01009
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1018011	1018247	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	41254	41490	GCA_009648895_1_1_992	GCA_009648895_1_1_992	-	4408047	.	.	hypothetical protein	MKRSDVLTQCLINTGCGLSEADIRHGIRTTFAEEYPDKNYDSWDIEISDQTANHIIKTVGRAMWIKVDLFIQDLWDAY*	.	hypothetical_protein	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0053	shell	direct	high	236	0.996	GCA_009648895.1_01010
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1018842	1019771	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	42085	43014	GCA_009648895_1_1_993	GCA_009648895_1_1_993	+	4408047	.	PRK00321	recombination associated protein; Reviewed	MFNPFFKNLIIYRLSRDLVIIRDGNTEELARQLEAFRFKPCGSQDMARSGWMPPLGQHSDQLFHLVNDQLLLVIRREEKILPNTVIAEELNNKVSKLEADQGRHLKKTEKDSLRDEVLHSLLPRAFTRSSTIRIWLNLSAALVMVDTSSARRAEDSLALLRKTLGSLPVVPLTMETPVELTLTEWVRGSGAPSSFALGNEAELKAILEDGGIGRFKKQELSSDEILNHLEAGKVVTELALNWQSRIDFTLNDSCVLKRLRFADELLEQNDDIDREDVAQRFDADFVLMTGELSSLTENLISVLGGEAKR*	mmseqs_cdd	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0054	shell	direct	high	929	0.999	GCA_009648895.1_01011
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1019867	1020406	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	43110	43649	GCA_009648895_1_1_994	GCA_009648895_1_1_994	+	4408047	.	.	hypothetical protein	MNYEKTKELVKSGHQLVVLLGKQNGMHEAASLVQRMAGQLDVLIAVLREKTKQCDQLAAENAALKAFGDKLDRMHNDLNGEGTGIQGRAEVACQQIALEAALEEFDAIKTPATDAFLREVRAQAITSALDSLDGVFDTDCVMETNGISYEEAEQRTTGALAVNSALIEFAAELRKGGAA*	.	hypothetical_protein	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0055	cloud	direct	high	539	0.998	GCA_009648895.1_01012
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1020403	1020762	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	43646	44005	GCA_009648895_1_1_995	GCA_009648895_1_1_995	+	4408047	.	pfam17526	Family of unknown function (DUF5448). This is a family of unknown function found in Gammaproteobacteria.	MSKEVEKLNDHELADLKNAIERELKRRADGPKVTTYYVVSCITNAQHFTDMDCALRCLKRVAEDLIEWVAGDQENRDYVNRCTGIVGAKLQVVEMNVDHFNMRVAENYFDDDCYPPEAS*	mmseqs_cdd	nonviral_gene	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0056	cloud	direct	high	359	0.997	GCA_009648895.1_01013
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1020759	1021160	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	44002	44403	GCA_009648895_1_1_996	GCA_009648895_1_1_996	+	4408047	.	PF13935.6	Ead/Ea22-like protein	MMTMNTAKLKAAAEKVRWVDWSAYKPHSGARGYEVRAGSEAVAQHCLKDDAAFIAEASPKTVLCLIAALEAAEKRNAELEESHKKLRDAMAVIHNTIRLDGLNAPLAAIMSRAKRAHEESAAAAGINLETGGE*	hhsuite_tools	hypothetical_protein	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0057	cloud	direct	high	401	0.998	GCA_009648895.1_01014
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1021194	1021763	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	44437	45006	GCA_009648895_1_1_997	GCA_009648895_1_1_997	+	4408047	.	pfam16473	3' exoribonuclease, RNase T-like. This is a highly divergent 3' exoribonuclease family. The proteins constitute a typical RNase fold, where the active site residues form a magnesium catalytic centre. The protein of the solved structure readily cleaves 3' overhangs in a time-dependent manner. It is similar to DEDD-type RNases and is an unusual ATP-binding protein that binds ATP and dATP. It forms a dimer in solution and both protomers in the asymmetric unit bind a magnesium ion through Asp-6 in UniProtKB:P9WJ73.	MNHLMIDLETMGNKPTAPIIAIGAVLFEPSTGVMGPEYYAVVDLESSMVRDALADPGTILWWLKQSAEARSAITSDNRVHITNALGGLIKLIEDNCEPKSLQVWGNGATFDNVIIRASFERHGFYCPWQFWNDRDVRTIVEIGRAAGFNPRYEIPFEGDLHNALADAKHQVKYVSAIWQRLIPATSNDI*	mmseqs_cdd	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0058	cloud	direct	high	569	0.998	GCA_009648895.1_01015
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1021801	1022010	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	45044	45253	GCA_009648895_1_1_998	GCA_009648895_1_1_998	+	4408047	.	.	hypothetical protein	MAKLMKASAWGRREFVPGSVPDNRTIKRWVENGLLRGRIVDGMVWVCAGEQWGVDSMISENVRRLIQED*	.	hypothetical_protein	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0059	cloud	direct	high	209	0.995	GCA_009648895.1_01016
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1022012	1023196	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	45255	46439	GCA_009648895_1_1_999	GCA_009648895_1_1_999	+	4408047	.	PDB:1Z19_B	Integrase	MAGRPRKRENRHFPDYLYFDKETGQYRFQLITGKRKNIGTDRAVAIAIAREYNLRMRPESMPSIESLVRESGGINGEARPFAEHAQALLDRAIRDENPGTDAKAVWLNDIERVKEFFADIYACDIDLEHVNGYIKKYHSEASANVQNRKVSFLKKLFSYAVDESLMMDNPAERKKMRRVDSKTRRRLTLDDFNKIHRAAPLWLQTAMDLAMQTTHARLEVSRIRYSIKQPGEGVCGCVWFPEPQGEIFGTLYIHRQKVQHKEASHVAIPIGSVLRDIIERSRDNVASPYVVHRLPLKRSNPTSKEVRHPTQVAPDYLSRSFSAMRDEVGVGSNLPEDQRPTFHEIRALSAFLFNKQGIDPQGRMAHSDAKSTKIYTENHIDWVCVPHGEIKTAS*	common_virus_hmm	common_virus	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0060	cloud	direct	high	1184	0.999	GCA_009648895.1_01017
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1023989	1024876	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	47232	48119	GCA_009648895_1_1_1000	GCA_009648895_1_1_1000	+	4408047	.	PRK15243	virulence genes transcriptional activator SpvR. 	MNLLISKKLKYFIVCFEAKCINSAAEQLCVTRSPLARVIYEMEEKMGGKLFIRKYNYLEPTELAITLYEKIKPVYDLLYSIENDFSISAKCSRFELLCDISVPLVIYQHILSWQKKTNQPVCCRRVSVSCADIQSLHTNPDAGILSFREIAYTDNLIFHKASDESIFLLMPETLHVTALKNFNSIRNVSLLIRKDVFSNELKGIISNSIKSFIPHVDIIETDRDTASILISVSSGEGMMLLPECLTSFFSPPGVKKIKIPDIRIQSGLYINKKHKSTAIVSDIMQVLAAITKQAQ*	mmseqs_cdd	nonviral_gene	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0061	cloud	direct	high	887	0.999	GCA_009648895.1_01018
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	CDS	1024993	1025343	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	48236	48586	GCA_009648895_1_1_1001	GCA_009648895_1_1_1001	-	4408047	.	.	hypothetical protein	MSSKVALGEIIMTLVSDPIEMIRILIILTLGEVGRWLCGGGRLRERTGDLIISILLFALIRPHIISMSSIFGMRISSRTIAICIALVGSKGINRILVYIIKKRTGFDIDKVLEKKK*	.	hypothetical_protein	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_CDS_0062	persistent	direct	high	350	0.997	GCA_009648895.1_01019
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3364050	3365213	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	1	1164	GCA_009648895_1_1_3087	GCA_009648895_1_1_3087	-	4408047	.	PDB:1Z19_B	Integrase	MSLFRRGETWYASFTLPDGKRFKQSLGTKDKRQATELHDKLKAEAWRVSKLGETPDMTFEEACVRWLEEKAHKKSLDDDKSRIGFWLQHFAGMQLKDITETRIYNAIQKMTNRRHEENWKLREEALRKKGKPVPPYVPRPAATATKATHLSFIKALLRAAEREWKMLDKAPIVKVPQPKNKRIRWLEPHEAKRLIDECPDPLKSVVEFALATGLRRSNIINLEWQQIDMQRRVAWIHPEQSKSNQAIGVALNDTACRVLKRQIGNHHKWVFVYKESCTRPDGTKAPTVRKMRYDANTAWRAALKRAGIEDFRFHDLRHTWASWLVQAGVPISVLQEMGGWESIEMVRRYAHLAPNHLTEHAKQIDSIFGDCVPNLSHTEKQDVINGG*	common_virus_hmm	common_virus	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0001	shell	direct	high	1163	0.999	GCA_009648895.1_03229
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3365440	3365793	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	1391	1744	GCA_009648895_1_1_3088	GCA_009648895_1_1_3088	-	4408047	.	.	hypothetical protein	MSYCRFSSDNWRSDVYCYESAQGYITHVASTRIIGDVPAIPFFFDVPPADFFEAVRKQSEFIESAEREPIGLDHDGDMFIDKTPDEMIDRLIYLSGKGYFVPVSAIESLSEEIKEGA*	.	hypothetical_protein	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0002	cloud	direct	high	353	0.997	GCA_009648895.1_03230
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3365834	3366247	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	1785	2198	GCA_009648895_1_1_3089	GCA_009648895_1_1_3089	-	4408047	.	.	hypothetical protein	MEEVTREQYEAALAAAQQPVWDGEGLPPVSYECEAKYRDAANAEWFIFRCVGVDCGVAFGWAGKEAVTLDRDSYEFRPIRSEADNKRAAGVTALAKAGGAVDFEYGRKTIDGELSAPGWYELYDKIAAGEVAGIRIE*	.	hypothetical_protein	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0003	.	unmatched_CDS	none	0	0	.
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3366360	3366569	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	2311	2520	GCA_009648895_1_1_3090	GCA_009648895_1_1_3090	-	4408047	.	pfam04448	Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	MSEWIKCSDRMPELRQKVLGWNGYSVTECTYRRNEYAKTAKGREPRFEFYAGISHGITHWMPLPAPPAE*	mmseqs_cdd	common_virus	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0004	cloud	direct	high	209	0.995	GCA_009648895.1_03231
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3366701	3366865	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	2652	2816	GCA_009648895_1_1_3091	GCA_009648895_1_1_3091	+	4408047	.	PF08410.10	Domain of unknown function (DUF1737)	MLNSFVRTDSQDRADFTTRCNAKITSGFLPIGDMSVIQMGPGRTIEYAQAFTKV*	hhsuite_tools	hypothetical_protein	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0005	cloud	direct	high	164	0.994	GCA_009648895.1_03232
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3366872	3367297	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	2823	3248	GCA_009648895_1_1_3092	GCA_009648895_1_1_3092	+	4408047	.	PDB:3P9A_H	Terminase-small-subunit	MATEKGKTGRPSDYLPEVADDICALLASGESLVKVCKRPGMPDKSTVFRWMAAHEDFRDKYAKATEARADSIFEEIFDIADSAIPDAAEVAKARLRVDTRKWALARMNPRKYGDKVTNELVGKDGGAIQIETSPMSTLFGK*	hallmark_hmm	common_virus	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0006	cloud	direct	high	425	0.998	GCA_009648895.1_03233
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3367294	3367734	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	3245	3685	GCA_009648895_1_1_3093	GCA_009648895_1_1_3093	+	4408047	.	CDD:TIGR01547	phage-terminase,-large-subunit,-PBSX-family	MTTINPIFQPFIEAHRYKVAKGGRGSGKSWAIARLLVEAARRQPVRILCARELQNSISDSVIRLLEDTIEREGYSAEFEIQRSMIRHLGTNAEFMFYGIKNNPTKIKSLEGIDICWVEEAEAVTKESWDILIPTIRKAADNESDKG*	hallmark_hmm	common_virus	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0007	cloud	direct	high	440	0.998	GCA_009648895.1_03234
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3367715	3368191	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	3666	4142	GCA_009648895_1_1_3094	GCA_009648895_1_1_3094	+	4408047	.	PDB:3LJ4_Y	head-to-tail-adaptor	MSLTKGDIALFALRKAGIASSATLTDVEPQSLEDAIHDLEGMMAEWLTVPGNIGYIFAADGEEPLPDDDSGLPLKYRDAVGYQLMLRVMGDYVIEPSPRQESSASRAYEALLVDTVSVPSMRRRGDFPQGQGNKYDNLSSDRYYPDAETPVNGDVLNP*	hallmark_hmm	common_virus	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0008	cloud	direct	high	476	0.998	GCA_009648895.1_03235
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3368199	3369620	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	4150	5571	GCA_009648895_1_1_3095	GCA_009648895_1_1_3095	+	4408047	.	CDD:pfam11134	Stabilisation-protein	MPIQQLPLMKGTGRDYRNVDYVDLLPVNMLATPKEVLGSNGYLRSFPGIVKVNDVAGPSRGAMYNSHESAVYRLCGNKLYKSGDEVGSLPGIGRVSMACSYNSQAIGANGTMTLFRYDDTIKTLSNWDIGTGYTQYELGYLRDLCRNRSRYVWSKDGSDSFFISDLEDESKPDRYAAEYRAESQPDGIIGIDDWRDFVVCFGTKTTEYFSLTGNASAVGVAIYQAQPSMMVQKGIAGTYCKTKYADTHAIISHPATGAPSVYLINSGAVQQIATASIERILQDYSEEDLATGVMETTRFEAHELLIIHLPRHVLVYDGSVTQGGAQWSILKTGLADDVHSAIDYVYEGNQITCGDKAASVVGVLVKAITSQYGAQQEHLLYTPLFKADNARAFDFELESATGVSQFAEQMFISATTDGINYGKEQLIPWNAPFRYDQRAILQRIGRIRKNIGFKIRIVTSSPVTLSGCQVRLE*	hallmark_hmm	common_virus	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0009	cloud	direct	high	1421	0.999	GCA_009648895.1_03236
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3369620	3370291	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	5571	6242	GCA_009648895_1_1_3096	GCA_009648895_1_1_3096	+	4408047	.	PDB:3C9I_E	Tail-needle-protein	MADAPQKVIVKSSRIDASILPPNFPLPYKLYVIQQTTDLKDIADASNGANELAYEATVKNIEQDATLDDHENRISGLRSEVDDHESRITANTNSISSLSSRVTATEGDISGLKTRVTTAEGSITTLQGDYVSKSATATQNLASPVNVTTSYSVDGTKVIGARQTGWTAATGTSLLSAFNASQSYSASTTYTQSEISALATGLVQARQRIKAMEDALRAHGLIN*	hallmark_hmm	common_virus	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0010	cloud	direct	high	671	0.999	GCA_009648895.1_03237
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3370291	3370746	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	6242	6697	GCA_009648895_1_1_3097	GCA_009648895_1_1_3097	+	4408047	.	PHA00771	head assembly protein	MITFTPTRNIDLIEAVGNHPAIIAGSNNGDGYDYRPECRYFEVSVHGNFGGIVYYSEIQPLSFDCHAMYLPEARGFGKEIGLSFWRYLLSETNVQCVVSFAARKFRHGQIYCAMIGLNRVGTIKKYFKGVDDVTFYSATREELMEFLSRQK*	mmseqs_cdd	common_virus	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0011	cloud	direct	high	455	0.998	GCA_009648895.1_03238
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3370755	3371429	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	6706	7380	GCA_009648895_1_1_3098	GCA_009648895_1_1_3098	+	4408047	.	.	hypothetical protein	MLIFQLASKHLENRLYLKGGKGGDGGASAQAKAINKQTDLQREQWQTVMNNLAPFTPLAQQYVSQLQNLSSLQGQNSALNSYYGSDQYKQLANQARYQTLQSAEATGGLGSTATSNQLATIAPTLGQSWLSGQMQNYNNLANIGLGALQGQANAGQTYANNMGALYQQQANLAAANANRPSGFQSALSGGLGGAATGAAIGSAFGGPGIGTAIGAGIGVLGSLF*	.	hypothetical_protein	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0012	cloud	direct	high	674	0.999	GCA_009648895.1_03239
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3371439	3372881	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	7390	8832	GCA_009648895_1_1_3099	GCA_009648895_1_1_3099	+	4408047	.	pfam16928	DNA/protein translocase of phage P22 injectosome. Inj_translocase is a family of putative phage translocases that are involved in the injectosome mechanism. Phage P22 of Salmonella typhimurium ejects four proteins, gp7, gp16, gp20 and gp26, which are ejected from the phage virion into the bacterial cell after absorption. These four proteins may play a role in DNA ejection.	MSTWDMGNGGSLLAGLGGINSNAPSVNDSNAALALIRDNNEIQRSGANNLGLQALQGIGNVMQVQKQAQQQQRQREFQQAYSTAYATGDRNEMRKLAVQYPEQFDAVRNGLGFIDEDQRNTVGNLAAGARLASSSPDAMANWLQSNAGELARVGVNPQDVAQMYQQNPQQFGEFVDHLGLTSLGPEKYFDAVDKMAGREIDKGKLAEQIRSNKAGEGLQAQQIAVSRQNALTSAYAPTSAMQNYAQYAQMLKTDPAAAAIFAQAAGINTGPVGANRLVQLSDGRTVKVSGKVHGSGANAFYEGVDDNGNMVRVPTSAISAPPSSAATAQNYAMKKDLDSIESASSDQLDFMTGVTGYNGAPALGADIRSRIGGKEQRQLYNAAQRIQGRMQNQGIAAARDMGASGINTVAEAKMYFQGMPQLDFSSPEAAQESVRNIRQYTDQYNQQYNVNVGAGRQQANQAPPSQKQQQTTGYSSLWGD*	mmseqs_cdd	common_virus	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0013	cloud	direct	high	1442	0.999	GCA_009648895.1_03240
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3372881	3375139	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	8832	11090	GCA_009648895_1_1_3100	GCA_009648895_1_1_3100	+	4408047	.	PFAM:PF06871.10	DNA-transfer-protein	MAKAWKDVIASPQYQALAPEQKAQAQEQYFNEVVAPQAGSNAEQAKQAFYSAYPKGLLEKGNIDIHNRPVVKNPDGSISTVRSMSTNIDGREVLIPTVSDDGRIMSDDEAIDNFMRTGKHLGMFDNPDDATAYAESLHNQQADEYLPNQNPPQNQPANTDAQQPIQQQGGIMSDLGYGLAETGRGLLQAGINVANIPAELTDAVTSAAAWAGNKLGIGDGTYQPAPRVTTQGLEQDFGLQPGALTPQTSEGRIFAEALPYLTPVGIERAATAAPTLAGRIAEGGSRLLAENAMGSLAANSDKNDASALATDLGLGVGLGAAANGVVRAAGAGYRALTGSMAPEAAQAIRFAEQNNVPLTTTDVIPPRSGVGRAAQTTAEKIPVVGTSGMRAAQQESRSQLVQNFANKFGEYNPAEVVNSLKSKTSGIKQAAGRRLEQVQSAMSGVSIQPSRAIQQIDDEVARLQKLGGVADTDTISKLQAYRDELAKGNVDLEQLSNLRSQFRMDVKGDRPVMPTRSDAAVQRVYRAMTGDIDSAIGQSLGNDVLRRYRQANAVYADEAAKLQNTRLKNVLMKGDLTPEVVNNMLFSKNKSEIQSLYNSVGQAGRVQMRNGIIGKAMEKSGGSPDQFLRQLNIMSNQTGIAFKGEDAAYIRGLKNYLESTKQAARAGVSTPTGQQAVPLIIGFGTAINPKAAAIGAGYGLLARMYESKAVRNAMLRLANTPRGSSAFEKAAADVATAIKSLAQGAKSESLAQ*	phrogs_hmm	hypothetical_protein	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0014	cloud	direct	high	2258	1.0	GCA_009648895.1_03241
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3375292	3377244	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	11243	13195	GCA_009648895_1_1_3101	GCA_009648895_1_1_3101	+	4408047	.	PDB:2VKY_B	Tail-protein	MADITANVVVSNPRPVFTDSRTFKAVANGRVYVGKIDTDPTIPANQIPVYIENEDGSHVQIPQPLIINAGGKIVYNGQVVKVVTVQAHSMKVVDAYGAQVDYIPDVLKYDPDQFKITLSESGGAGFVGTNHRGNLAADLNAIDRRPDGYATGVAGVFSYGRDVEIDKDISTSSNTYIPEMQSRMVYRLTDNQFVEGRGGKVTDTSGKSAVYGMLGTDAAPTTNVTINDIQAGGTSSPTDNTNEAISSFALLTRYTKNLIVRGVRSFAGLAGGVYVSQARNAIVNDVITEKQVYHTGEEVGGGRAGYSVLTDNAKETIINNVMQTVEAAPNGRHLLYMSTGSGGDTNGNVNVIANNMIGRWIGRDDRNQWMLAIRASQRFILNNAIQEGGNGGMIFNDENNNITDYIASNMVFQTIKYAAGVPVYAVGQGQSPTYKSNRWLITNHNINGVPKDSSVGRTDIIAYNISGNNGMLSNVVITCPGESTPILVGHDTQSVQNITIANIHDNIGGGSSGTPAPLIAFTGSAVSNITVRGITTSRSPMFLRLYVVTDLTVDFTRKARINFSNGSVTKTDIDTITGTVTPLSTGFTIQFPSHVTQKAIDNLVIRMLSAGQVNILSTGSKTVTFNTFTNAGVSLSMLTGNYTFDLTLFS*	hallmark_hmm	common_virus	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0015	shell	direct	high	1952	0.999	GCA_009648895.1_03242
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3377301	3378764	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	13252	14715	GCA_009648895_1_1_3102	GCA_009648895_1_1_3102	-	4408047	.	PHA01514	O-antigen conversion protein C	MIDINRVYRNRWSLSWSFLLSILFILPFAINNNYFVDDWLRSDTGNSGWEENGRPLASFMMSAMSLFPNGKNVFGDGSLLDVFPLTLIISSALLVASAYAFCVQMDITSRLKVFLICSLPVCNPFWVGNIQFRHDSALMAASFLLAVLAAIASPRGRIMLLTSFAMLTASLSLYQASINAYIAMSICIIFNDYLRRDRFDIKLAFYLALTILVSYVVYSKLVMPIAHLSDYAISNSKILQLNKEFPLRVYNNFINYFRFLIDNSPRFYLTLWFVAIAASIASCVKKFGFSLKALYCVLFILILFLCSFGALSMFERPAIAPRTMMASSIIMMFLVYISTGWYSTVTATCSSAMIIISFIFSYIISGAMNAVERNDRFLATQIASVYFKHYNADHKNIYITGKPRLPKYALRVTKSFGMARYMVISAFNNYRFKYSLTSQYGISSGYPAPKIAEEYEIFLRKDDKQTIYSDALFDTFYYKDAIVFKFK*	mmseqs_cdd	common_virus	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0016	persistent	direct	high	1463	0.999	GCA_009648895.1_03243
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3378757	3379686	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	14708	15637	GCA_009648895_1_1_3103	GCA_009648895_1_1_3103	-	4408047	.	cd04187	Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of  bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the  bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	MKISLVVPVFNEEDTIPIFYKTVREYEPLKSFEVEIVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPQLIERWQAGADMVLAKRTDRSTDGRLKRKSAEMFYKLHNKISNPKIEENVGDFRLMSRDVVENIKLLPERNLFMKGVLSWVGGRTDIVEYTRAERIAGNTKFNGWKLWNLALEGITSFSTFPLRMWTYIGLLVAGFAFMYGSWMIVDTLAFGNPVRGYPSLLVSILFLGGIQLIGIGVLGEYIGRIYIEVKNRPRFIIKRKGDNRD*	mmseqs_cdd	nonviral_gene	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0017	persistent	direct	high	929	0.999	GCA_009648895.1_03244
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3379683	3380045	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	15634	15996	GCA_009648895_1_1_3104	GCA_009648895_1_1_3104	-	4408047	.	pfam04138	GtrA-like protein. Members of this family are predicted to be integral membrane proteins with three or four transmembrane spans. They are involved in the synthesis of cell surface polysaccharides. The GtrA family are a subset of this family. GtrA is predicted to be an integral membrane protein with 4 transmembrane spans. It is involved is in O antigen modification by Shigella flexneri bacteriophage X (SfX), but does not determine the specificity of glucosylation. Its function remains unknown, but it may play a role in translocation of undecaprenyl phosphate linked glucose (UndP-Glc) across the cytoplasmic membrane. Another member of this family is a DTDP-glucose-4-keto-6-deoxy-D-glucose reductase, which catalyzes the conversion of dTDP-4-keto-6-deoxy-D-glucose to dTDP-D-fucose, which is involved in the biosynthesis of the serotype-specific polysaccharide antigen of Actinobacillus actinomycetemcomitans Y4 (serotype b). This family also includes the teichoic acid glycosylation protein, GtcA, which is a serotype-specific protein in some Listeria innocua and monocytogenes strains. Its exact function is not known, but it is essential for decoration of cell wall teichoic acids with glucose and galactose.	MLKLFTKYASVGVLNTLIHWVVFAACFYALGTSQALANFSGFVVAVSFSFFANARFTFNSSTTTSRYMLYVGFMGSLSAAVGWAADKCSLPPVVTLVVFSAISLVCGFIYSKYIVFREAK*	mmseqs_cdd	nonviral_gene	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0018	persistent	direct	high	362	0.997	GCA_009648895.1_03245
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3380457	3381671	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	16408	17622	GCA_009648895_1_1_3105	GCA_009648895_1_1_3105	+	4408047	.	PDB:1Z19_B	Integrase	MKLNARQVETAKPKDKPYKLADGGGMYLEVFPNGTKSWRMKYRIAGKEKRVVFGVYPTITLADARSKRDDAKKLLVNGVDPSAFKKESKLAQIEEVKNTFQQIALEWHNMKVKKWSAGYASDILEAFNKDVFPFIGQRPVADIKPLELLNVLKKMEERGATEKAKKVRQRCGEVFRYAIVTGRAEYNPAPDLTSAMQGHESKHYPFLTIEELPAFFKALAGYSGSELVVLAARLMIITGVRTGELRGALWSEIYTDKGLWEISAERMKMRRPHIVPLSVQALEIIEKIRAMTGNFHLMFPGRNDPSKTMSEASINQVFKRIGYTGRVTGHGFRHTMSTVLHEQGYNTAWIETQLAHLDKNAIRGTYNHAQYLDGRREMLQWYADYMDSLENGGNVMHGTFNRRA*	common_virus_hmm	common_virus	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0019	cloud	direct	high	1214	0.999	GCA_009648895.1_03246
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3381811	3382677	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	17762	18628	GCA_009648895_1_1_3106	GCA_009648895_1_1_3106	+	4408047	.	pfam19924	Family of unknown function (DUF6387). This entry represents a member of a biosynthetic gene cluster (BGC). This BGC (BGC0001055) is described by MIBiG as an example of the following biosynthetic classes, NRP (non-ribosomal peptide) and polyketide, in particular the yersiniabactin biosynthetic gene cluster from Escherichia coli. This family appears to be predominantly found in proteobacteria.	MAIMRNWSTEHTKEVKKWLDINTYRGFEDLTLIQLYHELLARTLFFKPYHEEFEAKAVNLYIDRIFSGKPFLITEQHLGYLTREDTLYQPPHFFLTTTERLAQLSIVGLRNSLFFWDGSDEYSVNREFLDSPVSEALPKLFRDTVMVEIDLANGTDEEIAESLKAALPQWRKVRGIEADTSDSIRFGYGTIKKIINYRLIPMIDILVWSTLHKVRISEDRLSRLLYTDDDDEEQTRLNHQIRDTDRPLAIKAASIPFIRQFHLFINKNSHLKNIRVSDVMKIADSDKD*	mmseqs_cdd	nonviral_gene	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0020	cloud	direct	high	866	0.999	GCA_009648895.1_03247
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3382768	3382974	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	18719	18925	GCA_009648895_1_1_3107	GCA_009648895_1_1_3107	+	4408047	.	pfam05930	Prophage CP4-57 regulatory protein (AlpA). This family consists of several short bacterial and phage proteins which are related to the E. coli protein AlpA. AlpA suppress two phenotypes of a delta lon protease mutant, overproduction of capsular polysaccharide and sensitivity to UV light. Several of the sequences in this family are thought to be DNA-binding proteins.	MNQPCTRLIRLSEVMNKTGFGKAWIYRLISQNRFPQPVKIGIRAIAFIESEIDEWIQLTIENSRKHVA*	mmseqs_cdd	common_virus	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0021	cloud	direct	high	206	0.995	GCA_009648895.1_03248
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3383360	3384565	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	19311	20516	GCA_009648895_1_1_3108	GCA_009648895_1_1_3108	+	4408047	.	CDD:cd01186	Transposase	MSYQIKKFVMSNGERGCLVLDKETQLPVYYQNLYLTTNVRNRSATASTMEIVATNLLILSNFLKSRKINIIDRIEIKEFLSVAEVDDLIRYARQRFDKQKITNVRLIKGYQIARRTFGYRIHVFSSYLNWLCGLLHSIKGIHARYEVESFIESIRAHLPLNKSLSMNDRKDKSLSKEEIKKLFELLEIEGSQNPFQKDVQVRNRLIFTLLLNCGLRAGELLNLKVNDLNPRDYTLSIFRRHDCIEDRRLNQPLVKTGEREIPLSDELALEILDYINNYRNKYTKKKKHNFLFVTHSSCKTVGEPLSVSAYEKIISTIKKSSPELKNLSGHKLRHSWNYFYSSEIDDSNLDISRKSGLRCYLMGWSKDSKMSENYNFKHISMKEKEVIGRVYDSLRKITKGE*	common_virus_hmm	common_virus	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0022	cloud	direct	high	1205	0.999	GCA_009648895.1_03249
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3384567	3385880	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	20518	21831	GCA_009648895_1_1_3109	GCA_009648895_1_1_3109	+	4408047	.	PDB:1A0P_A	Recombinase-XerD	MKTSTLKKENVVFAMMKGYGFRISDNKWQLDINNCVCPHKVADKMPESMRVGYLNTLAYFSSEYSAGYIKNINHIFSQWLRLMDLEMINSKAVYQFNVSLGPEKNYKLNSIKNFLSKWKKLGYEGVDNSALRMLEKITIKPNLTGEAVKRRDPNSGPLTEEELKIILESIRKLLKEDKIPLFMYCYVILLATTGRRPSQLTSLKAKDLIRTEEGCFLNIPKVKQRKNFRSEFSMMRIDDSLYEELITLIDLNQKHIEDRVKRNISHLKNELPILMDIKQYVLIDTGQSLDTIMTTDFLHMKNSFISNRLNNLTTKFNIGSSSNNGPIRINARRFRYTLGTRLAKEGASVEVIAKALDHKSINSSGIYVKNCPDNVHDIDKMLNPFFEPLSKIFLGEEQSKNKKLFTEYILNSFGFFNDKNDQIECFTCKNFRAWSSQ*	common_virus_hmm	common_virus	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0023	cloud	direct	high	1313	0.999	GCA_009648895.1_03250
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3385877	3387076	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	21828	23027	GCA_009648895_1_1_3110	GCA_009648895_1_1_3110	+	4408047	.	COG4688	Uncharacterized protein [Function unknown]. 	MTNIILFEPANANNPSLNVDEFIEFCKSNIFNSKLAISWKSNVWKRYYRFNKFDMNNNRNSKDRLDGSFIDFAKAYMFHIHSFNRSKSNQNTLSMLKIIEFVLLKLYGEANIIKCNNIIFDECARLASAKYSKVQAVGIGKELEKLCSFLTGNRMTTSSYFFWVNPLRHKITQSWKGYEPSLEGHSKLPDIKSVIAIAEIFSKDESQLSTRDIFTTSVLALLMCAPGRISEILSLPADCEIIEKDDKGIERYGLRFFSAKGYAGDIKWIPTVMVPIAQKAIARLKKLSSNARFASRTMEGQGTDPSKFALVTTKPQNFPWYDEEKRIKYSNALCLLFDRQLCQKTRKDFTSFFKPTAEFFRMDINAVASIKGTTNLFKRHGYINEDGIPYSISESPRII*	mmseqs_cdd	nonviral_gene	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0024	cloud	direct	high	1199	0.999	GCA_009648895.1_03251
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3387073	3387687	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	23024	23638	GCA_009648895_1_1_3111	GCA_009648895_1_1_3111	-	4408047	.	PDB:4U7B_B	Mos-transposase	MKRVGIKAQVGYRSPRARKGEASIVSPNRLQRQFNPDAPDERWVTDITYIRTHEGWLYLAVVVDLFSRKIIGWSMQSRMTKDIVLNALLMAVWRRNPEKQVLVHSDQGSQYTSHEWQSFLKSHGLEGSMSRRGNCHDNAVAESFFQLLKRERIKKKIYGTREEARSDIFDYIEMFYNSKRRHGSSEQMSPTEYENQYYQRLGSV*	common_virus_hmm	common_virus	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0025	shell	direct	moderate	543	0.883	GCA_009648895.1_03252
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3387942	3388220	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	23893	24171	GCA_009648895_1_1_3112	GCA_009648895_1_1_3112	-	4408047	.	COG2963	Transposase and inactivated derivatives [Mobilome: prophages, transposons]. 	MSGKRYPEEFKTEAVKQVVDRGYSVASVATRLDITTHSLYAWIKKYGPDSSTNKEQSDAQAEIRRLQKELKRVTDERDILKKAAAYFAKLSD*	mmseqs_cdd	nonviral_gene	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0026	shell	direct	high	278	0.996	GCA_009648895.1_03253
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3388741	3389145	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	24692	25096	GCA_009648895_1_1_3113	GCA_009648895_1_1_3113	+	4408047	.	.	hypothetical protein	MAKHITGYDEKSIINVINNWNKDEKLTWDALCDKLVKIIGKRPSRQSLSSHVKVSDCFNSKKKILKLGIKKTCSIKPANLEIACQRIKRLETENEALIALNNRYLEQFKIWLYNSHLKQITVEELNRPLPVKDI*	.	hypothetical_protein	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0027	cloud	direct	high	404	0.998	GCA_009648895.1_03254
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3389242	3389655	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	25193	25606	GCA_009648895_1_1_3114	GCA_009648895_1_1_3114	+	4408047	.	.	hypothetical protein	MKKININLMERYLLLLDRFVDKLTESGFEEQEIIEQSYLFCAGFYIKYQPEIEKLTFSNREVVLTFLLLSYYSHINKLDDNLINKERMKHVCSSLINFIVSNGSRTEKVYANEKKKYEAPTLKRGLSIKEKKRKYGL*	.	hypothetical_protein	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0028	cloud	direct	high	413	0.998	GCA_009648895.1_03255
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3389713	3390378	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	25664	26329	GCA_009648895_1_1_3115	GCA_009648895_1_1_3115	-	4408047	.	.	hypothetical protein	MSISTTKHRNEEVNVSLSDRRKAEITAPRFELFGETYTFVETFSGTVIDSNPGNNQIWVKSNAGDEKQIPDYGIPFRSSHTIHKYELRQYGKNSSCYVHNNALIINKNTGENEVNLKKKTIIIPAFLTMLFHNASTTSFFRAMPVPKWFYILFTLLCMASFIAFCSLLVGFKDGYVWDEHKCMWFTYFLSRIGSFVCIKWIKRRSERFDHELRNLIDLVKS*	.	hypothetical_protein	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0029	cloud	direct	high	665	0.998	GCA_009648895.1_03256
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3390684	3391961	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	26635	27912	GCA_009648895_1_1_3116	GCA_009648895_1_1_3116	-	4408047	.	PFAM:PF03432.13	Relaxase-Mobilisation-nuclease-protein	MKGMQKIKRGKTFNGLISYLLKPASHHKSAPYVIGGNVIESFAEALSAEFNTTKLLRSDVSKPVWHNSLRLPAGEHLTTEQWVEVADDYMKRMGFSETHLRAYILHDDKAGQHIHIIASRIELSSGKLYLGKNENLISTRIIQQLELDYSLTRTKGKGLEFLVSPSTASPSPEPKRKKSRNEAMMEKRTGELCPKTIIQNALEVFLADKPSTTEFVHQLNAQNIRAIPNIASTGRMNGFSFEYNGIAFKASQLGKSYSWTALQDKLDYQPERDNAFLFKLRASVSEAPCMFMTPDAPEITTAAVNSPIEALIHDNHNRAGQDEYTNASVKQLHLEAGAGAQEAFATEAVKEASKQSYMVSMFRWLETIPYLNTIITIFKNLKIPTLKRPLKYKTITDVRVIEITPLPKKNLIVSAPQSRRASLSM*	common_virus_hmm	common_virus	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0030	cloud	direct	high	1277	0.999	GCA_009648895.1_03257
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3391958	3392371	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	27909	28322	GCA_009648895_1_1_3117	GCA_009648895_1_1_3117	-	4408047	.	6QEQ_C	Bacterial mobilisation protein (MobC)	MVENNTFNKIVVSMHSRNRSVNEAKLSHNQLRSHCVSVRLNDEELTLLNERRGRHRKGEWLRLSLLNKLPAVVPAINIEAWKILGEISQKLNKLVAHLDNKSQGSSLTQTELFAVKRQISELRINLVGADLWGERNE*	hhsuite_tools	hypothetical_protein	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0031	cloud	direct	high	413	0.998	GCA_009648895.1_03258
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3392573	3393082	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	28524	29033	GCA_009648895_1_1_3118	GCA_009648895_1_1_3118	-	4408047	.	.	hypothetical protein	MAQHRYKILSICVPYLFYPVPKKAFDSLNKNELSICPKDFITVYVVIDTEGSDKSDIFISLTEAKNKCLEKNNKVFNESKIPRLTLDLPSNWRQYIVTQNKPKLEYDIDDTTLLNEISNAEKDIMLSLLEERKLMLRDLFSGMKEDYRIKKDASVNNDPSIVPKSPKIS*	.	hypothetical_protein	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0032	cloud	direct	high	509	0.998	GCA_009648895.1_03259
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3393213	3393782	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	29164	29733	GCA_009648895_1_1_3119	GCA_009648895_1_1_3119	+	4408047	.	.	hypothetical protein	MFNELDFNKILISSERRIYFNGFEHAFFSYDDVKPIPESFDNMYLITKMNLLRAQAKSNFIYYELYDNNVIHTQLFQNNKLNKNDLSIDVFTDKYIKRFLHVIEMSNDFDNNDWEPYIKFLSNMELKKSFYALQYTILSMPVTSHIPQYLVEKYLNKLSEERDMHKNNNIKYLEQYILNLLDLKYICIH*	.	hypothetical_protein	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0033	cloud	direct	high	569	0.998	GCA_009648895.1_03260
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	CDS	3394391	3394663	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	30342	30614	GCA_009648895_1_1_3120	GCA_009648895_1_1_3120	+	4408047	.	TIGR03976	His-Xaa-Ser system protein HxsD. This rare conserved hypothetical protein of small size occurs exclusively, and perhaps universally, in the context of a pair of (uncharacterized) radical SAM proteins, TIGR03977 and TIGR03978. Many members of this family have invariant motifs LYW and LLNDYxLRE, but PSI-BLAST starting from family members well below 20 % pairwise sequence identity to this group eventually brings in the entire family as modeled here. The family TIGR03979 represents the fourth regularly conserved member of this system.	MCERMLKKDVYSEWVIRNSLYWMTSLTQWKLCEDISSWTISFENDSPECLYEFERLLNDYTLREKLQHKTGALRDSIVHKVLRSVDERLS*	mmseqs_cdd	nonviral_gene	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_CDS_0034	cloud	direct	high	272	0.996	GCA_009648895.1_03261
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3665803	3666015	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	1	213	GCA_009648895_1_1_3368	GCA_009648895_1_1_3368	-	4408047	.	PRK11507	ribosome-associated protein YbcJ. 	MATFSLGKHPHVELCDLLKLEGWSESGAQAKIVISEGLVTVDGAVETRKRCKIVAGQTVSFDGQSVTVTA*	mmseqs_cdd	nonviral_gene	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0001	persistent	direct	high	212	0.995	GCA_009648895.1_03512
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3666017	3667009	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	215	1207	GCA_009648895_1_1_3369	GCA_009648895_1_1_3369	-	4408047	.	PRK10792	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD. 	MAFEPPAGQLSERHKRKLTARRASDRISSSPLLLITDGIFSLMAAKIIDGKTIAQQVRLEVAEKVKARVAAGKRAPGLAVVLVGANPASQIYVGSKRKACEEVGFVSRSYDLPETTSEAELLALIDELNADAAIDGILVQLPLPAGIDNVKVLERIAPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTYGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRQHVENADLLIVAVGKPGFIPGEWIKEGAIVIDVGINRLENGKVVGDVVFEEAAKRASYITPVPGGVGPMTVATLIQNTLQACVEYHDGEEA*	mmseqs_cdd	nonviral_gene	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0002	persistent	direct	moderate	867	0.873	GCA_009648895.1_03513
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3667184	3668347	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	1382	2545	GCA_009648895_1_1_3370	GCA_009648895_1_1_3370	-	4408047	.	PDB:1Z19_B	Integrase	MSLFRRGEIWYASYSLPGGKRIKESLGTADKRQAQELHDRRKSELWRVDRLGDFPDVTFEEACLRWLEEKADKKSLDTDKGRMGFWLEHFEGMKLKDITEAKIYTAVSKMQNRKAKEIWIQKCAAAERKGKEFPVFEGRPVTTSTKAKHLALMKAILRAAERDWKWLEKAPVIKIPQVRNKRVRWLEPEEAERLINECPEPLKSVVRFALATGLRRSNIINLEWQQIDMQRRVAWVNPEDSKSNRAIGVALNDTACRVLREQIGNHHKWVFVHTKAGNRPDGTVTDQVRKMRVDDQRAWNSACRRAGIEDFRFHDLRHTWASWLIQAGVPLSVLQEMGGWESIEMVRRYAHLAPNHLTEHARQIDSILGFCVPNMSHTGNKEDLKEA*	common_virus_hmm	common_virus	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0003	cloud	direct	high	1163	0.999	GCA_009648895.1_03515
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3668574	3668927	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	2772	3125	GCA_009648895_1_1_3371	GCA_009648895_1_1_3371	-	4408047	.	.	hypothetical protein	MSYCRFSSDNWRSDVYCYESAQGYITHVASSRIIGDVPALPFFFDVPPADFFEAVRKQNEFIESAEREPIGLDHDGDMFIDKTPDEMIDRLIYLSGKGYFVPVSAIESLSEEIKEGA*	.	hypothetical_protein	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0004	cloud	direct	high	353	0.997	GCA_009648895.1_03516
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3668959	3669306	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	3157	3504	GCA_009648895_1_1_3372	GCA_009648895_1_1_3372	-	4408047	.	.	hypothetical protein	MSDLAMKVLEWQAKGRVGISSATMASIALGLEKNFYHGRFDAPSDPADLHRCMLLVEDIPEIKDSFSAIAKKVKSFSPILREWDRLTGLLKEELKRPDGRAPETYALMQELLKAA*	.	hypothetical_protein	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0005	shell	direct	high	347	0.997	GCA_009648895.1_03517
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3669341	3669595	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	3539	3793	GCA_009648895_1_1_3373	GCA_009648895_1_1_3373	-	4408047	.	.	hypothetical protein	MSKDSDYLIIYRGEIHHRITPGRWVLIQRAKEYGGGWWLGKAYDDVFMLEFERPTSMAVASEYIMSHRRMSTFPPWDDNFELTQ*	.	hypothetical_protein	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0006	persistent	direct	high	254	0.996	GCA_009648895.1_03518
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3669685	3669897	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	3883	4095	GCA_009648895_1_1_3374	GCA_009648895_1_1_3374	-	4408047	.	.	hypothetical protein	MDWINKYAWYGRKAASSVLPFILGIIAEQRAPDYALWFTIPVIIFFGWARKTRAANDVWFRGNRGPIDDD*	.	hypothetical_protein	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0007	shell	direct	high	212	0.995	GCA_009648895.1_03519
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3669897	3670499	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	4095	4697	GCA_009648895_1_1_3375	GCA_009648895_1_1_3375	-	4408047	.	pfam12961	Domain of Unknown Function with PDB structure (DUF3850). The search results from NCBI sequence alignment indicates a conserved domain belonging to ASCH superfamily. Dali searching results show that the protein is a structurally similar to the PUA domain, suggesting it may be involved in RNA recognition. It has been reported that the deletion of PUA genes results in impaired growth (RluD) and competitive disadvantage (TruB) in Escherichia coli. Suggestions have been put forward that, apart from their usual catalytic role, certain PUS enzymes (e.g. TruB) may also act as chaperones for RNA folding. The interface interaction indicates that the biomolecule of protein NP_809782.1 should be a dimer.	MSEIREPVTHNLKILPENYSAVCAGVKRAELRKNDRDYRAGDTLDLCEWDKDDESFTGNYISVTVTHVADVSEWMPGYVLLSIELALRERAEPVYQVQAMDWHDVEKYLYDEALDRGIRCRVIYTAPPAPVAAGWIAFSERMPELDTRVLLYFPDYGGHIEDGCIGDEGDGHYHYFFDGYSLRHEPTHWMPLPEAPGKEG*	mmseqs_cdd	common_virus	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0008	cloud	direct	high	602	0.998	GCA_009648895.1_03520
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3670496	3670708	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	4694	4906	GCA_009648895_1_1_3376	GCA_009648895_1_1_3376	-	4408047	.	.	hypothetical protein	MATNKTLEASNLWQIERARFEERHPDQRVLLNRIEEQLHSNIMAAVILLNDLSFAVREVERKSIETGGEA*	.	hypothetical_protein	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0009	cloud	direct	high	212	0.995	GCA_009648895.1_03521
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3671017	3671274	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	5215	5472	GCA_009648895_1_1_3377	GCA_009648895_1_1_3377	+	4408047	.	.	hypothetical protein	MSEVSREVCEEYLDALVTVELAAKLAQKDGRKVNGAIRATVNALLPRLSDRKVHGIFTGLARQPFPDGALKMLRRQLDSMVGEPA*	.	hypothetical_protein	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0010	shell	direct	high	257	0.996	GCA_009648895.1_03522
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3671271	3671450	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	5469	5648	GCA_009648895_1_1_3378	GCA_009648895_1_1_3378	+	4408047	.	.	hypothetical protein	MTTVTNIALAQQRQKDKEMLEAIEWQLNNVHETEKRLMEMRRELVNRLGINKPEGGDAA*	.	hypothetical_protein	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0011	shell	direct	high	179	0.994	GCA_009648895.1_03523
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3671447	3672211	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	5645	6409	GCA_009648895_1_1_3379	GCA_009648895_1_1_3379	+	4408047	.	pfam03589	Antitermination protein. 	MNLENALKYHFAKSTMINDSPRATASDALTGTDIMAAQGMVQNRAQMGFAAFMGKMGVSSNDREKAIELLTLYAIERCDKVAALRKLESDIKPKVMQALATYAFEDYSRNAGSTRQCECCNGAGFIHAEVVTMKHIGRPNLAARREQVKVLCQKCKGKGVVSTACSDCKGRGKAINQEETEKQGVPVVSDCRRCGGVGYPRLPSTEAFAAVCQITDAISLDTWKKSVKPFYDGLIIKFEVEESWADAQLREVTR*	mmseqs_cdd	common_virus	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0012	shell	direct	high	764	0.999	GCA_009648895.1_03524
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3672472	3672753	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	6670	6951	GCA_009648895_1_1_3380	GCA_009648895_1_1_3380	-	4408047	.	PF07308.13	Protein of unknown function (DUF1456)	MDNGQLTVNLKLIASALKLTRHDLVEIVREGGMEISSTHADKWLRAKGATKIATGNSADYGAHINRTETIKDDEFRAFCIGLKPWLDKLSAEK*	hhsuite_tools	hypothetical_protein	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0013	cloud	direct	high	281	0.996	GCA_009648895.1_03525
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3672972	3673217	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	7170	7415	GCA_009648895_1_1_3381	GCA_009648895_1_1_3381	+	4408047	.	pfam04971	Bacteriophage P21 holin S. Phage_holin_2_1 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Members of this family fall into the holin superfamily II, and Phage 21 S holin is the prototype for this superfamily. It has two transmembrane segments with both the N- and C-termini on the cytoplasmic side of the inner membrane in E. coli. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the build up of a holin oligomer which causes the lysis.	MSHMSKLASGAAYGASAGTVANGLLTRLSPDEWSAVGVIAGIVVALLTFGINWYYKRKTTLAQIQAYERWPSAAGQLSKED*	mmseqs_cdd	common_virus	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0014	cloud	direct	high	245	0.996	GCA_009648895.1_03526
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3673220	3673723	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	7418	7921	GCA_009648895_1_1_3382	GCA_009648895_1_1_3382	+	4408047	.	CDD:cd16900	endolysin-R21-like-protein	MAIPSSLRNKLIAAAGAGSMVIATIFIGGKDGVEGRKYQAYKDVAGVWTVCDGHTGNDIIRGKTYTDKECDRLLWKDLQPAKATVDKLVKVPLSEYQRASLYSFVFNVGSDAFAKSTLLRKLNKGDQEGACEEMRRWVYAGGMKWKGLQNRREMERSMCLAESENDL*	common_virus_hmm	common_virus	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0015	cloud	direct	high	503	0.998	GCA_009648895.1_03527
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3673713	3674177	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	7911	8375	GCA_009648895_1_1_3383	GCA_009648895_1_1_3383	+	4408047	.	pfam03245	Bacteriophage Rz lysis protein. This protein is involved in host lysis. This family is not considered to be a peptidase according to the MEROPs database. This family Rz and the Rz1 protein (pfam06085) represent a unique example of two genes located in different reading frames in the same nucleotide sequence, which encode different proteins that are both required in the same physiological pathway.	MTFKWKLILFAAMSLLLAIAIVIASHYRSALKESQASLTKVNRELNLAKDTISDMQTRQRDVAALDAKYTQELADAQATIDQLHDDVASGKRRLQLHATCTKQSASGTASLDDAASPGLTDSAERDYFTLRERIETVTRQLSGLQAYVREQCLR*	mmseqs_cdd	common_virus	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0016	shell	direct	high	464	0.998	GCA_009648895.1_03528
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3674534	3674770	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	8732	8968	GCA_009648895_1_1_3384	GCA_009648895_1_1_3384	+	4408047	.	.	hypothetical protein	MMALEKYNGQEIMADIYRITVKTKTGETHEGLMKRSQPEIINGFIGVAREDGSWVYLAPDNVQEMEYVPEPEVEEQTS*	.	hypothetical_protein	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0017	cloud	direct	high	236	0.996	GCA_009648895.1_03529
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3674780	3675226	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	8978	9424	GCA_009648895_1_1_3385	GCA_009648895_1_1_3385	+	4408047	.	PFAM:PF03592.15	Terminase-small-subunit	MATESKTGRPSDYLPEVAADICSLLADGESLRKVCERPGMPNKSTVFRWLAQHEEFRDQYAKATETRADAIFEEMFDIADTVAEEAAAVGKARLRIDTRKWALARMNPKKYGDKVSQEIDHKSSDGTMATKPTTIRLVGVDPDNGKPS*	hallmark_hmm	common_virus	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0018	cloud	direct	high	446	0.998	GCA_009648895.1_03530
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3675210	3675641	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	9408	9839	GCA_009648895_1_1_3386	GCA_009648895_1_1_3386	+	4408047	.	PDB:5OE8_A	Large-Terminase	MESQVDLQIPAKLVPVFATEGVRYRGAHGGRGSAKTRTFALMTAVRAYQAAEANISGVILCAREYMNSLEESSMEEVKQAIRSVPWLDDYFDIGEKYIRTKNRRVSYVFCGLRHNLDSIKSKARILVAWVDEAESVTRLLHGQ*	hallmark_hmm	common_virus	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0019	cloud	direct	high	431	0.998	GCA_009648895.1_03531
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3675773	3676111	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	9971	10309	GCA_009648895_1_1_3387	GCA_009648895_1_1_3387	+	4408047	.	PFAM:PF06381.10	portal-protein	MSDFISRVIERFWQIGVIDPPKSGEVTLAWSDLLAPSEKEKIANMQAMAAVAKDTQAAFGTPAITENEIRAVGELEPISEPEEPAGAATTDPLTGEPIEQPTTTGQPDNSAQ*	phrogs_hmm	hypothetical_protein	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0020	cloud	direct	high	338	0.997	GCA_009648895.1_03532
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3676149	3677045	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	10347	11243	GCA_009648895_1_1_3388	GCA_009648895_1_1_3388	+	4408047	.	PFAM:PF04233.13	minor-capsid-component	MFRDIENRYYQIKKALKQLLDGYLVGRERSGNSLYGYILAREGSKPDTLYQVNAGTFIYDMSPQQLSDLLLRIETILDDYLLEGGNNNLWALQYVSDEYQRGTLQAFTNLSAQSAIYEQSTTLQQLLSSPAYQNQVAAAYISTYSEWRGITDAARADLSNIVADAIGRGVNPRETASLISKRLDVSMSRAKTIAQTEQVGALRQAQWSEAEWSKERLGLNAALLWISALKSTTRPWHAARHGKTFTTEEVEAFYAQNGNRYNCYCSQIPVLLNDDGALFNEGLAEKLSKERQKWSGIP*	hallmark_hmm	common_virus	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0021	cloud	direct	high	896	0.999	GCA_009648895.1_03533
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3677049	3677390	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	11247	11588	GCA_009648895_1_1_3389	GCA_009648895_1_1_3389	-	4408047	.	6IJE_B	Tai4	MKKVIFAALLSVSSVCNAGFLTGNDLYTKYQAYTRTDNGSASSADYELANEYLGYVAGVWDTMRDTSICPKGTVTRGQISDIVGQGLKNNPQDRADPGARLVLGYLMKAFPCS*	hhsuite_tools	hypothetical_protein	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0022	.	unmatched_CDS	none	0	0	.
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	CDS	3677415	3678623	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	11613	12821	GCA_009648895_1_1_3390	GCA_009648895_1_1_3390	+	4408047	.	PFAM:PF09979.8	head-maturation-protease	MRLNSIHVKSLAINSSNISTETIDGDEHIVIRGVVPVVDDVVMNGGLYPAEEINKSFKTLEGNPMPFGHPKIGNEHVSATNPRAVNQFHVGAWAENVRKDGDRVVMDMKVNKRIAQSSEKGKRLIERLDELQANSNAEPIHVSTGLLLRREQNSGKSKGKSYSWVARNMQFDHVAILLDEPGAATPEEGVGIFVIGCGQKAYKSVYSRAQRALVLRLKTEVVPVLTPLAGTPAINDYPWCFALVFRGHYYLGAFLNGPDNTCVALVSRLRRPRVLHHAAQKQSLAFWQARILCLRADERPRAGESAAVRQWVKALRLSLAPGWVRWWVNKAWRFGARSSALLAPLCAADYRLEDDAGVDVMPWRAWPACIAEENMVWIWRQSRHGKYIDAQRIAITQTGRQR*	phrogs_hmm	hypothetical_protein	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_CDS_0023	cloud	direct	high	1208	0.999	GCA_009648895.1_03534
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3894918	3895052	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	1	135	GCA_009648895_1_1_3582	GCA_009648895_1_1_3582	-	4408047	.	NF033226	manganase accumulation protein MntS. Members of this family are MntS, a small protein of about 42 amino acids that seems to play assist bacteria in accumulating manganese when iron is limiting. It may function as a manganese chaperone, or may inhibit manganese efflux transporters.	MNELMRCLNVFTHSPFQVRLRLLNMLCDMFNPKPQPGQDDNGQQ*	mmseqs_cdd	nonviral_gene	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0001	persistent	direct	high	134	0.993	GCA_009648895.1_03743
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3895219	3896259	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	302	1342	GCA_009648895_1_1_3583	GCA_009648895_1_1_3583	-	4408047	.	PDB:5C6K_B	Integrase	MSVRKLPTGEWIADFYTVNRSNGKNGKRIRRKFATKGEALAFENHTLQKVEIAPWLGEGKDKRTLIDLISIWFERHGVALRNGQKRKDAMTWAAECMGFPLATEFNAQLFTTYRAKRLEGLYARTSRVSGVSPKTMNLEHAYFLAMFNELKRIGEWSAPNPLENVRQYRTDETEMAFLNAEEIDRLLLECRRSKVKYLELVVKICLATGARWNEAATLRSSQIAGGKVTFVKTKGKRNRTIPLDDELISQLPDTKGALFPKPCYNAFRSALERAGIELPSGQLTHVLRHTFASHFMMNGGNILVLQKILGHAEITMTMRYAHFAPSHLEDAVRLNPLKCRKSVAVE*	common_virus_hmm	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0002	cloud	direct	high	1040	0.999	GCA_009648895.1_03744
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3896260	3896862	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	1343	1945	GCA_009648895_1_1_3584	GCA_009648895_1_1_3584	-	4408047	.	pfam16452	Bacteriophage CI repressor C-terminal domain. The C-terminal domain of the CI repressor functions in oligomer formation.	MSMQLLIMARFRLDPQTDSAPVLDRVLEAYGFTQKLQLAEHLDIASSSLSARYKRGGLPADIMLKCMAETGVTLEWLATGTGRKFDNEELDILKLPRKKIVDGQLYDSGILLFDKVTFLPGKPLPAHPACIIDGSKQYVIEQQFTEVFDDEWLVEIEGKVGVRTLTRIPVKKVRVSGVGMAFDCGLDDIKIIGRVILTIE*	mmseqs_cdd	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0003	cloud	direct	high	597	0.99	GCA_009648895.1_03745
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3896975	3897196	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	2058	2279	GCA_009648895_1_1_3585	GCA_009648895_1_1_3585	+	4408047	.	PFAM:PF11112.7	Cox-like-excisionase-and-repressor	MRPNITIVIPEPYLPLEEYCRRTGTKLETARNLIEYGKLPIKPKGAQKRGLVEVNMAALTIQALSECDISLNA*	phrogs_hmm	hypothetical_protein	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0004	cloud	direct	high	221	0.995	GCA_009648895.1_03746
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3897227	3897730	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	2310	2813	GCA_009648895_1_1_3586	GCA_009648895_1_1_3586	+	4408047	.	pfam06892	Phage regulatory protein CII (CP76). This family consists of several phage regulatory protein CII (CP76) sequences which are thought to be DNA binding proteins which are involved in the establishment of lysogeny.	MYDYKVSVHNYLDDACRAFAQAHNLTNLAKAVGMRPATLRHKLNPEQSHQLSLSELIAITDYTEDSRILDGLLRQINCQPSVPINNATPGNMQICALTAAASVGAIAGEAVSTEHMSAARRNHILDKARDAIRSLSLLAYTVENRIHSAPVLAAAVDIVTGSATGLM*	mmseqs_cdd	nonviral_gene	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0005	cloud	direct	high	503	0.998	GCA_009648895.1_03747
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3897741	3897932	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	2824	3015	GCA_009648895_1_1_3587	GCA_009648895_1_1_3587	+	4408047	.	pfam10893	Protein of unknown function (DUF2724). This is a family of proteins with unknown function.	MRPFVTYLTEQSPSPQLNAFSHGWIELPNGQRWNPAARYKFTGKSLRRPLWRRLLNIKGGKRG*	mmseqs_cdd	nonviral_gene	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0006	cloud	direct	high	191	0.995	GCA_009648895.1_03748
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3897925	3898341	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	3008	3424	GCA_009648895_1_1_3588	GCA_009648895_1_1_3588	+	4408047	.	.	hypothetical protein	MADNKEWLARIRRQINPSHSAAADFWDSLQPEWRGVVLHAAAISGTCELKATLAKCSWSELYARVGVRGMTQIRTGIQLARNTFGGFGSLRRDDFLPRTANRQEKPCVPVKNGPEMIIAPQILQIMEQRAQLHNNTGN*	.	hypothetical_protein	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0007	cloud	direct	high	416	0.998	GCA_009648895.1_03749
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3898345	3898746	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	3428	3829	GCA_009648895_1_1_3589	GCA_009648895_1_1_3589	+	4408047	.	.	hypothetical protein	MTIIAVEKECLMQEMAAWRVPMNYVRAFTAKSTQEGGLIGLDPFFFNDTEHLISPRHWLAIQAAFWCCAYREAEAREAQIEALAGVRAIFYTAGALGVGEITAMIQAWWRAAYPVHLVPAPNHSAAVTPPVFH*	.	hypothetical_protein	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0008	cloud	direct	high	401	0.998	GCA_009648895.1_03750
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3898813	3899046	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	3896	4129	GCA_009648895_1_1_3590	GCA_009648895_1_1_3590	+	4408047	.	PF10809.8	Protein of unknown function (DUF2732)	MKMIRKDLNATTPAADMMAMLAKATQEGKAVAADLCSTRLDKLATYAANEGLSAAEIVELIREEAAAITSKGGAAWQ*	hhsuite_tools	hypothetical_protein	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0009	cloud	direct	high	233	0.996	GCA_009648895.1_03751
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3899079	3899279	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	4162	4362	GCA_009648895_1_1_3591	GCA_009648895_1_1_3591	+	4408047	.	.	hypothetical protein	MTFMRGIAGEKGVYVPRYPTSRTGLALAKKGLVQFHWGANRWGLTYEGLQFLGIIGEEAASEGGVA*	.	hypothetical_protein	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0010	cloud	ambiguous	low	3	0.015	GCA_009648895.1_03752
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3899276	3900139	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	4359	5222	GCA_009648895_1_1_3592	GCA_009648895_1_1_3592	+	4408047	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MTKPIKTPLKWVGSKVRLMPQLRDHLPEGKRLVEPFAGSCAVMMNTDYDEYLIADLNPDLVNLYKAMAYHTDAFLMELESLFSAGELGEQESRAIFYYAVRDAFNLSGKGGGAESVVAAARFMYLNRHGFNGLCRYNRRGQFNVPFGKYKKNYFPLKEVRAFAEKAKRATFITAHYSETLSLVRAGDVVYCDPPYLTESGNFTSYTESGFSHLDQGRLARKLRRLAEKGVSIVASNSDLEMVHYLYAGFEAVRVSAPRSVGAAAGSQKKAAELILKGPFSAAVEASA*	common_virus_hmm	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0011	cloud	direct	high	863	0.999	GCA_009648895.1_03752
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3900136	3902154	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	5219	7237	GCA_009648895_1_1_3593	GCA_009648895_1_1_3593	+	4408047	.	PFAM:PF05840.12	Rep-protein	MSIAPNGQHHAVNEWRREHFARGVPRDVTLTERKLWQTNPADHEFRAQYLHEMPDWLAGYFGQRYEALFNGRDGRRRANTFLRQTIGQNVLPRLRKVSARYRMRADESDLPFGKALARLPSLDRREVKELAAKVASWMAQSFYEFTDTLKGKPKDEKEMCQRTADAYIRLSELTLFIGFTAPYWTTFTANKLTTRQAESGLLRMMAPAWWYTKIKRARDVQREHMAIAVGQVQKAASAYVSRGALNEWTEQKRRNAEFFKKFDLMNQDGDRVSMADMVYGSVSNPAVRRCELMVRMRGFEDIANETGMAGEFYTITAPSRYHSVHSKGGFVSQWNGCNPQDTQRYLCGVWAKARAALSRAGIHVFGFRVVEPHHDGTPHWHMLLFMRPQDVDAVRDILCYHARITDSEELNTPHALKARFHVEPIDPEKGSATGYIAKYISKNIDGFALDGEKDDETGESLRDMAKAVSAWASRWRIRQFQQIGGAPVTVWRELRRLRGQQLTDPRMDAVLAAADIASDWASYTELQGGPLVARRDLVVRLAYEITEQGNEYGEDVQRVQGICSPHVQGSVVATRLVKWAIVPKLAEASAEAGFSGGAAAPWSSVNNCTGGTRRRLTIELQKRGFDGSDLEINALLRGSSLALGYGRALIYRNGELRERHPQPENESWPGWG*	rep_hall_hmm	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0012	cloud	direct	high	2018	1.0	GCA_009648895.1_03753
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3902271	3902483	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	7354	7566	GCA_009648895_1_1_3594	GCA_009648895_1_1_3594	+	4408047	.	.	hypothetical protein	MDLLEQSETLERIELIAKYVCVSESSARERQIALLWINEMVGAMRHNVAHKKENPHERGSHDSRSGRGFQ*	.	hypothetical_protein	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0013	cloud	direct	high	212	0.995	GCA_009648895.1_03754
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3902457	3902726	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	7540	7809	GCA_009648895_1_1_3595	GCA_009648895_1_1_3595	-	4408047	.	pfam04606	Ogr/Delta-like zinc finger. This is a viral family of phage zinc-binding transcriptional activators, which also contains cryptic members in some bacterial genomes. The P4 phage delta protein contains two such domains attached covalently, while the P2 phage Ogr proteins possess one domain but function as dimers. All the members of this family have the following consensus sequence: C-X(2)-C-X(3)-A-(X)2-R-X(15)-C-X(4)-C-X(3)-F. This family also includes zinc fingers in recombinase proteins.	MRVLKIECPECGSKAVIRKTNRKHRQISDIYCACADVECGHTFVMNLTFSHTLSPSAKTGDAMVQKILSALSPDQKQMALDLLKAAPAA*	mmseqs_cdd	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0014	cloud	direct	high	269	0.996	GCA_009648895.1_03755
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3902777	3903817	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	7860	8900	GCA_009648895_1_1_3596	GCA_009648895_1_1_3596	-	4408047	.	CDD:PHA02536	portal-vertex-protein	MSKKKFRAAKRQDSSKPARSMSILRFGKPEPVLTTGTDYRDVWYDNDAEHYTLPIDRLALAQLINLNGQHGGIIHARKNMVLADYQGGGLSRDEMEAGAFDFLTFGDVAILKVRNGWGDVIGLAPLPGLYTRRRKTGEFVVLQDGEPIVYPQEDIIFIKMYDPQQHIYGLPDYIGGIHSALLNSEAVIFRRRYYHNGAHTGGILYTRDPSLTDEMEEEIERQLRDSKGIGNFSTILVNIPGGDKEGVQFIQMGDISAKDEFASVKNISAQDVLNAHRFPAGLAGIIPENAAGLGDVEKAERTYKKNEVAPIQRRFMQAVNTDPEVPERLYLNFDLSYLEAGREGAS*	hallmark_hmm	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0015	cloud	direct	high	1040	0.999	GCA_009648895.1_03756
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3903814	3905733	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	8897	10816	GCA_009648895_1_1_3597	GCA_009648895_1_1_3597	-	4408047	.	CDD:PHA02535	terminase-ATPase-subunit	MLRNELLRNKPDAALRFILISSDITSFPNKYELTPPFYKKGAGIIKAMAKYSDELKGVVRSLYLRRYTPKEIASELNLPNARIVYYWAEKYSWADLLSFESTEEAIERRYQLLAGRDNKTDLDLKEMDMLIAHATKLRAQSNKHKEKLATSQGVARAAATADESDDDQPKRKRKYKKNDISGLSEDDFNAWADEHLFGYQKHLRANIGQQVRNILKSRQIGATWYFAFEAFENAVLTGDPQIFLSASKAQAEVFRSYIVNIAEQYFGITLTGNPIRLSNGAELRFLSTNKNTAQSYSGHLYCDEYFWVPNFARLNEVASAMATHDKWRTTYFSTPSAKTHQAYPFWTGEEWKQGSKKRAAVKFPSFDEMRDGGRLCPDGQWRYVITMEDAIAGGFNLASIDKLRNRYNPTTFNMLYMCVFVDSKDSVFSYGDLEACAVETETWQDHKPDAMRPFGDREVWGGFDPARSGDFSCFVIVAPPLFAGEKFRVLRVFNWKGMNFRWQAKQIEQLFKKYNFAYLGVDVTGIGQGVFDNIQHFALRVAVPIRYDRNTKNQLVLKAADVVESQRIEWDKDLKEIPASFMAIRRTTTQAGGAMTFVADRTTDTGHAEAFWAIAHALHNEPLNYENRPKSRWRLRQSA*	hallmark_hmm	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0016	cloud	direct	high	1919	0.999	GCA_009648895.1_03757
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3905757	3906581	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	10840	11664	GCA_009648895_1_1_3598	GCA_009648895_1_1_3598	+	4408047	.	PFAM:PF05929.10	capsid-scaffolding-protein	MSQSHLRTDWLCIATEGDTVDGRELKRQWLVDAAETYNREWYGALIWPEHEKNCGNFGEVLDVMGEEGEDGLYRLYAQIRPNAYLLEANRYDQLIYFSVELTPDGNFRNTGRTYLEGLAVTDRPASVGTTRLRFNRRKANKAGYYGCVITRDGKFIQENEMKKNWQSYFGLKPKTKNFAEGDETETPSGDDQLNVLANAVNELEGRMDAVEVQLKELSGDMDKVAEVMDTEDFARLRDNLGTILANFGKLDAKITTLPKRNFGQQDKKPRFNVL*	hallmark_hmm	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0017	cloud	direct	high	824	0.999	GCA_009648895.1_03758
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3906642	3907664	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	11725	12747	GCA_009648895_1_1_3599	GCA_009648895_1_1_3599	+	4408047	.	PFAM:PF05125.11	Major-Capsid-protein	MQLNQRARDLIGAYSAALCQGYNVQRADRYFSLTDPKETALRLALLEAVEFLNMITCADVDQLSGQVVSVGSSALHTGRKEGGRFMRSVGVDGNDYKLVETDSCAALKWDLLSVWANAGKEESEFFNLVQTFSNQAFALDMLRIGFNGKSVEKTTDPEKNPNGEDVNIGWHERMKGFDAGKQIITDAVVLDDKGDYRSLDAMASDLINAKIPQQYRNDPRLVVLVGADLVAAEQYRLYQSADRPSEKIAAQMLGSTIAGRPAIVPPFMPGKRMVVTPLSNLHIYTQRGTRQRKAEFVDDRKQFENKYLRNEGYAVEVPELYAAIDENAVTIGQVTEPAEG*	hallmark_hmm	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0018	cloud	direct	high	1022	0.999	GCA_009648895.1_03759
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3907668	3908366	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	12751	13449	GCA_009648895_1_1_3600	GCA_009648895_1_1_3600	+	4408047	.	CDD:PHA02537	terminase-endonuclease-subunit	MALSPAQRHSQRIAMEQQLLRREAVERAESLHLQIQALSNDVAHVRNLPTIADREAYKRDVLLPRWMPTVESYLAGGKVYPNPVFSWCVVWLFDAGDFEKALAWADIAIEQQQPTPENIRSHFPAFVADTVLSWAEATAAAGESVEPYFSQTFEKVTQCWRLHEQITAKWFKFAGLLMLRDDEGQPRATALDDVETLEKADALLASAEKLYKRVGVGTMRAQIGARIRSLTK*	hallmark_hmm	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0019	cloud	direct	high	698	0.999	GCA_009648895.1_03760
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3908463	3908915	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	13546	13998	GCA_009648895_1_1_3601	GCA_009648895_1_1_3601	+	4408047	.	CDD:pfam05926	head-completion-protein	MFNGRPLEYQDAPLTNNGFWPDLNLKDFQAQRALPPDIEADTIAQALIAAVMEVNAELVSVEAMYRAQGHVSAADVPGVMMAGINGLCAQYTKAVFARAKADLLGEFATIGRRETHPGQESDETRAGLLAEASVAIRRMKGLKRATVKKV*	hallmark_hmm	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0020	cloud	direct	high	452	0.998	GCA_009648895.1_03761
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3908912	3909412	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	13995	14495	GCA_009648895_1_1_3602	GCA_009648895_1_1_3602	+	4408047	.	PFAM:PF06891.10	phage-tail-completion-protein	MKTQLESLTEFFSENIPERARQGFDSVIDEMQVVPAAKDMGLDQYRQALIRYNALLSWERFPYRLCPPQLLVSLLEVWLDEYGSELMEHVGITDADPQWDVTVEDAETATVVLSVPLVEELVIRRDEKGAIPFRGERWSLVDPEIWTALSAQVYGVDETGAPIGDA*	hallmark_hmm	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0021	cloud	direct	high	500	0.998	GCA_009648895.1_03762
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3909412	3910119	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	14495	15202	GCA_009648895_1_1_3603	GCA_009648895_1_1_3603	+	4408047	.	PFAM:PF05069.12	Virion-morphogenesis-family	MFVGGELNKKQLADLRGALASLELPPRKRQRLLWRLAKYGLIAAAKRNVRNQQSPDGQAWPGRQTKRKGKMLRNMPKLLHIREMPEIDAVRVYLAGGSYRNGKTPVAAGAVAWSQQNGMKMRINRSAQPREATAGKMATIAQAKKLRALGYQVKRGKRMKKPGYREITETMPYAQAGLLIRKLTGRAAKTSWTIDLPARAFLGMSDEEFNKALARQLQAIGFGWDVNAQDIRGRQ*	hallmark_hmm	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0022	cloud	direct	high	707	0.999	GCA_009648895.1_03763
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3910116	3911243	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	15199	16326	GCA_009648895_1_1_3604	GCA_009648895_1_1_3604	+	4408047	.	PDB:3J9Q_Q	tail-sheath	MTWPSVDVNQVNQLQGETSEVERVVLFTGTAKTNTGKTLAVTAQTDFDALLGAADSPLKRDLKAAQANAGQNWWAFVHPLAEDGGADAWVNAVLAAQVSCSVEGVVLSDDVTDKAVINQAATLRSTLIAKYGRWVWFALAVQGMQPDEGQADYLKRLSELQAGIAEKAVQLVPRLWGNEPGVLAGRLCNRAVTVADSPARTKTGALLSLGSDEMPVDGTGAVLELATLRALEAQRYSVPMWYPDYDGIYWADGRTLDVEGGDYQSIETLRIADKAARRVRLLAIGKIADRSLNSTPGSIAAHQSLFAKPLREMSKAAEINGVTFPGEVKPPQDGDVSIVWKTKKQVEIYIVVRTYEVPLQISISLVLDQSLEASA*	hallmark_hmm	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0023	cloud	direct	high	1127	0.999	GCA_009648895.1_03764
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3911240	3911695	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	16323	16778	GCA_009648895_1_1_3605	GCA_009648895_1_1_3605	+	4408047	.	PFAM:PF10772.8	major-tail-protein	MSKRISGMSFDFYIDGTLVHAEKITLDITDNTTAVQTRGVPDGFVDGDVSAEGEIEFSIKALAVLKGLAQRYGSWRGIPPVDYLFYAKAGDEESKVEAFGCKMNLSSILDIDQKGGALSTRKVKYQVTDPRFINIDGVPYLEPEATENLIG*	hallmark_hmm	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0024	cloud	direct	high	455	0.998	GCA_009648895.1_03765
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3911705	3911998	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	16788	17081	GCA_009648895_1_1_3606	GCA_009648895_1_1_3606	+	4408047	.	pfam04550	Phage holin family 2. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the buildup of a holin oligomer which causes the lysis.	MQEYEKGFWALLIMGGLIALGKMLTSDEPITIRLVAGRVIVGSALSLMAGVVLYLVPDIHPLALIGFGSALGILGLSGVEAWLRKKGISGLFSKGGN*	mmseqs_cdd	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0025	cloud	direct	high	293	0.997	GCA_009648895.1_03766
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3911999	3912340	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	17082	17423	GCA_009648895_1_1_3607	GCA_009648895_1_1_3607	+	4408047	.	cd14845	L-Ala-D-Glu peptidase, also known as L-alanyl-D-glutamate endopeptidase. This L-Ala-D-Glu peptidase family includes L-alanyl-D-glutamate peptidase (bacteriophage T5) (also known as L-alanoyl-D-glutamate endopeptidase), and Ply118 and Ply500 L-Ala-D-Glu peptidase. Bacteriophage endolysin degrades the peptidoglycan of the bacterial host from within, leading to cell lysis and release of progeny virions. The bacteriophage endolysin Ply118 cleaves between L-Ala and D-Glu residues of Listeria cell wall peptidoglycan. This family belongs to the MEROPS peptidase M15 subfamily C.	MTLSEKQQLFTVMVASLIHWAEEKGYRLTFGEAYRTPEQAALNAKKGSGISNSLHTQRLAVDFNLFINGKYATRTEDYLPLGEYWESLGGSWGGRFKTNPDGNHFSLEHNGVR*	mmseqs_cdd	nonviral_gene	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0026	cloud	direct	high	341	0.997	GCA_009648895.1_03767
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3912340	3912672	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	17423	17755	GCA_009648895_1_1_3608	GCA_009648895_1_1_3608	+	4408047	.	PFAM:PF10828.7	Rz-like-spanin	MSRAALAVMVALVLAFAGGWKAAGWQRDSIDLAIQRTAAATGKQVQDAASKSGRALEEKLEALRNASPREIRTELVKPVFTSRCLSDEFVSMYNDATASAERALSGKPEN*	phrogs_hmm	hypothetical_protein	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0027	cloud	direct	high	332	0.997	GCA_009648895.1_03768
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3912819	3913076	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	17902	18159	GCA_009648895_1_1_3609	GCA_009648895_1_1_3609	+	4408047	.	pfam10963	Phage tail assembly chaperone. This is a family of phage tail assembly chaperone proteins.	MEKIKLVVAGTEITFEPNQTAYNKFINEMSMDNKVAPANNYLNRIVAAESKEALAEIIKRPGAALQLVGKINELYAPELEIEVKN*	mmseqs_cdd	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0028	cloud	direct	high	257	0.996	GCA_009648895.1_03769
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3913264	3915324	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	18347	20407	GCA_009648895_1_1_3610	GCA_009648895_1_1_3610	+	4408047	.	PFAM:PF10145.8	tail-tape-measure-protein-	MKQLDFTLSLIDKLTRPLKQAQNSVTGFADKSKEAFKRIGGGALAMWGVAETVKGALSPAIEMYDALNEASARGVDSTALKTVQRDAMRFSMTYGASAVEFVNSTAEISGAIDGLTSTDLPQVTKVANTLAFALKATSSETAEFMGQMFANFRSDAERLGKVQFAEQLAGKMAYMRQTFGVEMGAIKDLMEGARGVGTNFNIGLDEQLAVLGQLNRTLGSEASSAYEGFMTGAIDGAKKLGLSFTDMQGNILSMPEMLMKLQGKYGKSLEGNLKAQAELDEAFGDSSAVVKQLYGNVALLQRNINELGGADGLKRTQEMAAKMVKPWDRFVQILKAIQTVIGLTLVPVLYPLLNRLADMGQTFARWMQIFPNIARVVGYAALAILGFAAAGASANIILGLSSFILTGLKALWYAVTLPVRLFTGAVWLARGAIVAWNAMLGVLRGVLLAVRIAAVLAGVGINFMSWPVLLIIGAIALLVAGCWLLVKHWDAIKAAVMETAAFQAVVAAVKWVADMFGKAWQFIAEGWEAFTKLLSGFSPAAALADMAIGIVNVFSNIWSTITESFSKAWKWIVDKLNNIPGVNIPVTAEIKQVDALSGAGAVPKNSAFIYSGANAAAPVKTDAAPLTANTLSTGGQVKNLDKGGISKTINNNGRTVTDNSRKINTVNIYPKETLSPGQLMEWQELG*	hallmark_hmm	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0029	cloud	direct	high	2060	1.0	GCA_009648895.1_03770
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3915324	3915650	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	20407	20733	GCA_009648895_1_1_3611	GCA_009648895_1_1_3611	+	4408047	.	pfam10761	Protein of unknown function (DUF2590). This family of proteins has no known function.	MSDLYIDLLIEGRNFTLNPGNEPVLCNNSQSIGQDIVHAILESGLATELVAERSPTLRADILTRLELLIESDERIEPGTVLVNEENQTRLWITAGTWDFGPVSVRADL*	mmseqs_cdd	nonviral_gene	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0030	cloud	direct	high	326	0.997	GCA_009648895.1_03771
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3915647	3916831	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	20730	21914	GCA_009648895_1_1_3612	GCA_009648895_1_1_3612	+	4408047	.	PFAM:PF04865.13	Baseplate-J-like-protein	MTEKPQVDFEEVVKASGMPVTKEALRERFNGIVQEEGLITNTSSMSPFWRLITAIVTTPVLWLKDVLVGTVLANMFVATASGQMLRLLAWAVNVTAKPATAAQGVIRFYKADAGAVVTVKAGTLIQTERINGTVYELATTADFTLAAGVASALIPVQATATGGAFNLAPGYYRILPVAVDGISHAVNETDWLTVPGADEESDDELRERCRNQFNLVGNYHTDAVYRSMIASVAGLSIDRIFFEHEAPRGPGTANAYLLLDTGVTSDPFIEAVNDYITTQGHHGHGDDMQCFAMPETRHTLAVTLYVRNLANLTDEEQSALRAGAENLIRCAFRENNEFDVKKTWPFSRFSFSNLGRELHRQFAAIDSLAFSLTDIVSGLSVPRLDTLTVRLMNA*	hallmark_hmm	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0031	cloud	direct	high	1184	0.999	GCA_009648895.1_03772
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3916824	3917411	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	21907	22494	GCA_009648895_1_1_3613	GCA_009648895_1_1_3613	+	4408047	.	PFAM:PF09684.9	Tail-protein	MPDFMKKLAGLRLPFWMSEGEPATLLRAARRFWTLVYGWVTWPVSQFDPLTCAEPLLNLLAYDRDVTRFDGEPLALFRRRVAYAFVNARDAGSVEGFINIFERLGIGYVELQERQPGIDWDVILVRVTDSQIADNTQLMIQIIRQYGRTCRRYQFEVITSESLAIRAGWDQGEYVVYPAQLNGTGAAGATFSATL*	hallmark_hmm	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0032	cloud	direct	high	587	0.998	GCA_009648895.1_03773
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3917420	3919393	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	22503	24476	GCA_009648895_1_1_3614	GCA_009648895_1_1_3614	+	4408047	.	PDB:5NXF_A	Long-tail-fiber	MSQTVITLAFEQWKAQQGVTGEAILLDEFVFANVPGLNPDAPISRSETLPPAAQIVHRQAVSRKGVVNENAVVHSVVLGADVGDFSFNWIGLMNKASGTLAMIVHAPVQQKLKTKAGQQGNVLTRSFLMEYNGAQAETGINTPAETWQIDFTARLAGMDERQRLENIDVFGAAAFLGDGWLVGKTGTQYFVTPGTGYVQGLRAQLAASQNITVTTKPVKVWLDVSWEGSLVSSWQVKSKVTVAANLADYVQNGVQHYVFALASIDANGVITDLRPQGSQAGRDASDAMKKHEQSRNHPDATLNAKGFTQLSSAVDSMAENMAATPKAVRTAMENASARLAKDRNGADIPDKSLFIQNIGLQQTVNLAAGAVPSERSINGYPLSANISLKAKDVGAIPISGSTEISGTLRTSGEVQSTNADSFRIAYGGIGAFWRNDGTSLYLMLTNKGDAFGKYNDLRPLRVGLDNGGVGIGTPLYVNNTLTVSKNVTASYSGSYAFSSQFATGAAFYESFSTGEASEFHPVLKQKAVINNQIARAFSFGTLCQEGKTTWCLHIVDSGGNGYTHQWDVSGNYLCPGQLVPGNYGNFDARYSLKTAAVIDVRQGSPGTIVLKRNGWNYVPGGCAFTGWYVEGDAPVDDTIQYKPIQININGAWRTISG*	hallmark_hmm	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0033	cloud	direct	high	1973	0.999	GCA_009648895.1_03774
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3919393	3919911	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	24476	24994	GCA_009648895_1_1_3615	GCA_009648895_1_1_3615	+	4408047	.	PFAM:PF02413.16	tail-fibre-assembly-protein	MMQLKKLSFYEPEIKEAENILYLKDEDGNDWYASQEKFSADRLKIAFTDDGIIRTADYDVSALWPVNMAVAEVSKESVPDGFNIDGNWMFDGSKIIPAPVDHVGLAEAKKQSLLQEATQAIAPLQDAVELEMASEGEVAQLAAWKKYRVLLNRVDTTTAPDIAWPEMPGDVA*	hallmark_hmm	common_virus	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0034	cloud	direct	high	518	0.998	GCA_009648895.1_03775
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3919901	3920626	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	24984	25709	GCA_009648895_1_1_3616	GCA_009648895_1_1_3616	+	4408047	.	.	hypothetical protein	MWREAKLAFSDAFSALDCAIVPAHPWIYGIGQQTENGAYLSPANAVAYLAGRLASVADMRDVVIFLVTGQTQDDFIKRLDELTAVFPAPAFTQVSRLARSAAELATVRMQLPARSSGVLPAALPLSVPTIRAVMNARAVASAQAQASAGIDMAGMKAALAGFAAERAGLLSQLADGLNQLTGKSARAWVFTAKGDAATLTRALMQGIPQPSAVHSAAIMLAGENLDGIKGMIHDLDNHAGA*	.	hypothetical_protein	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0035	cloud	direct	high	725	0.999	GCA_009648895.1_03776
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3920598	3921146	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	25681	26229	GCA_009648895_1_1_3617	GCA_009648895_1_1_3617	+	4408047	.	.	hypothetical protein	MTSTIMLALNGEAIPLKNMRVTISQQFQDKDQSGQTSATTKAEQGAKGKELRVVGEVPFKQISTLSRIFALANATDAGGKRQVYRVANEVARAVNLREATFTGTVDAPPQDGRMSWLVTFTLTEHLSVQEKREARATSRTASKTQKAGAGGGAASQTSAGEDAETLSWFERKVLKPVNDALG*	.	hypothetical_protein	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0036	cloud	direct	high	548	0.998	GCA_009648895.1_03777
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3921149	3922849	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	26232	27932	GCA_009648895_1_1_3618	GCA_009648895_1_1_3618	+	4408047	.	PFAM:PF06890.11	baseplate-protein	MKPVKRLYLSTDEVHLVDVNMTLELNSCGRGFITAETDTDYTGKLVRLDVGYSDLLLRWFTGYVERSQPAEKGFQRLFVRELVGVFERSWPCSFQHPTLKEIAGWLTEHSGITVTVPDAAYSDRPIPHFTHSGSGFQLLDNLGRAFGVNDYVWYQLPDGSLYLGGAEKALFAGRPVDIPADFNQGAAGGNSMTIPLVQTLRPGVEVNGQRVTKINLSGDNMTITWTPRDKATGRPLQKTPIQRQIEAHYPELASGLHLPKFARVVAHSEPVSSGNFSDPFRPRYAVDVQLLDADGKPDGNTPVFSAVPLPVPMAGNDSGMFQFPPEGTLVEVGFTGGRADKPFVRQTVPDGTSLPDVKPGEQLQQQREEVSQRVTQAGDWVRKTDQTISETSMSREVTADRERRELVSRETTVKATDKTTVLGTVSLLAGAVQHVATGDYAIAASGKFLARVEGDAEAEIDGHQKTHAKGGIETQTDGGLTEKIAQLRKSVAAGGQQIMGPTVHIGSESVNTLQMMLDTIDLLAQLASQCASHSHPGTGGPTTAAAFSQTAAQATQTRSRYENIIA*	phrogs_hmm	hypothetical_protein	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0037	shell	direct	high	1700	0.999	GCA_009648895.1_03778
GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote	cenote	CDS	3923416	3923676	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C154	28499	28759	GCA_009648895_1_1_3619	GCA_009648895_1_1_3619	+	4408047	.	.	hypothetical protein	MGRLAIGGALFIFKKRGEKLEPWESETSNSWPDPRYVLWPRGQWWDVRYLKRTQEGKEWLPIAEKPFADESAAWLAAYSHWLKRSK*	.	hypothetical_protein	C154	28759	3894918	3923677	GCA_009648895.1|CP045778.1@region_3894919_3923677@tool_cenote_CDS_0038	shell	direct	high	260	0.996	GCA_009648895.1_03779
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3961680	3962408	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	1	729	GCA_009648895_1_1_3649	GCA_009648895_1_1_3649	-	4408047	.	pfam19723	Family of unknown function (DUF6216). This entry represents a member of a biosynthetic gene cluster (BGC). This BGC (BGC0001055) is described by MIBiG as an example of the following biosynthetic classes, NRP (non-ribosomal peptide) and polyketide. It includes a member from the yersiniabactin biosynthetic gene cluster from Escherichia coli. This family appears to be predominantly found in Proteobacteria.	MHSITEMISTEFTNAPVATIITLVTAIGTVFKLLINIKSKLVKPREGEAKTLENAGIPSSLLRFFMIPLSTKKIPEIKRLDKFLPCVFALFFIGSFCFSAPVVIRTAKTPGEHALLIWKPTGEYFYISRDSAWQANIVARSKWNMRKAECTSNITRVATQSILPSPEVKKGICDLFLTQEGQRYLTNSIKVYPKEKTFVYVMLPFTELILLWITLGTILHVHFTKKLRKYIVGEHDKALSYV*	mmseqs_cdd	nonviral_gene	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0001	cloud	direct	high	728	0.999	GCA_009648895.1_03809
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3962786	3962968	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	1107	1289	GCA_009648895_1_1_3650	GCA_009648895_1_1_3650	+	4408047	.	.	hypothetical protein	MHDKVVSMCAALHPVSPLIEPTCGWSLGWGFVKLKYRAVRNFTQQKTHLCKRVNENNKLD*	.	hypothetical_protein	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0002	.	unmatched_CDS	none	0	0	.
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3963004	3964056	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	1325	2377	GCA_009648895_1_1_3651	GCA_009648895_1_1_3651	-	4408047	.	PDB:5C6K_B	Integrase	MAVRKLTTGKWLCECYPAGRSGRRVRKQFATKGEALAFERHTMEETESKPWLGESVDRRTLKDVVELWFKLHGKSLTAGQHVYDKLLLMVDALGNPLATDLTSKMFAHYRDKRLTGEIYFSEKWKKGASPVTINLEQSYLSSVFSELSRLGEWSYPNPLENMRKFTIAEKEMAWLTHEQIVELLADCKRQDPILALVVKICLSTGARWREAVNLTRSQVTKYRITFVRTKGKKNRSIPISKELYEEIMALDGFNFFTDCYFQFLSVMEKTSIVLPRGQLTHVLRHTFAAHFMMSGGNILALQKILGHHDIKMTMRYAHLAPDHLETALRFNPLATLPSGDKVAAAVGITP*	common_virus_hmm	common_virus	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0003	cloud	direct	high	1052	0.999	GCA_009648895.1_03810
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3964245	3964436	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	2566	2757	GCA_009648895_1_1_3652	GCA_009648895_1_1_3652	-	4408047	.	7MUC_IN	Legionella, Dot/Icm, Secretion, T4SS, TRANSLOCASE	MLGKVFFVVLSCSLLLNPLTTYARNYPCSGKKGGVSHYTSDGKFVCNDGTISKSKKICTKNSR*	hhsuite_tools	nonviral_gene	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0004	.	unmatched_CDS	none	0	0	.
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3964452	3965021	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	2773	3342	GCA_009648895_1_1_3653	GCA_009648895_1_1_3653	-	4408047	.	pfam16452	Bacteriophage CI repressor C-terminal domain. The C-terminal domain of the CI repressor functions in oligomer formation.	MDFNSGGKKAIERLVEAYGFGTRQALCDHLGVSKSTMATRYMRDIFPADWVIQCALETGTSLNWLTTGHGSKQASANTNTIEVEKYLLSDGALQKDGFYIFDKEFLPSTFKKPFVITDNNSEFICDKEFDDIRDGKWVISIDGEITIRDITRLPGGRIFVEGGNRAFECKIEDIEIIGKIISLTVKYVK*	mmseqs_cdd	common_virus	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0005	cloud	direct	high	569	0.998	GCA_009648895.1_03811
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3965167	3965370	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	3488	3691	GCA_009648895_1_1_3654	GCA_009648895_1_1_3654	+	4408047	.	PFAM:PF11112.7	Cox-like-excisionase-and-repressor	MTPNISITLNTPHVTIERYSELTGLSIDTINDMLADGRLPRHRLRKDKKREKVMINLAALTVDALSA*	phrogs_hmm	hypothetical_protein	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0006	cloud	direct	high	203	0.995	GCA_009648895.1_03812
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3965435	3965944	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	3756	4265	GCA_009648895_1_1_3655	GCA_009648895_1_1_3655	+	4408047	.	pfam06892	Phage regulatory protein CII (CP76). This family consists of several phage regulatory protein CII (CP76) sequences which are thought to be DNA binding proteins which are involved in the establishment of lysogeny.	MFDYQVSKHPHFDEACRAFALRHNLVQLAERAGMNVQILRNKLNPAQPHLLTAPEIWLLTDLTEDSTLVDGFLAQIHCLPCVPINEVAKEKLPHYVMSATAEIGRVAAGAVSGDVKTSAGRRDAISSINSVTRLMALAAVSLQARLQANPAMASAVDTVTGLGASFGLL*	mmseqs_cdd	nonviral_gene	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0007	cloud	direct	high	509	0.998	GCA_009648895.1_03813
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3966119	3966343	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	4440	4664	GCA_009648895_1_1_3656	GCA_009648895_1_1_3656	+	4408047	.	.	hypothetical protein	MYAAESEVVYQFRYRGESYSVPEDDLLCCYPSLSGDGSYFFTLKDGTFLRGEQVKETIRKNVSPLERYRKNKER*	.	hypothetical_protein	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0008	cloud	direct	high	224	0.996	GCA_009648895.1_03814
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3966366	3966707	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	4687	5028	GCA_009648895_1_1_3657	GCA_009648895_1_1_3657	+	4408047	.	pfam17282	Family of unknown function (DUF5347). This family of unknown function is found in Bacteria, mainly in Proteobacteria.	MAINGAAATVPLSPGERLNGLNHIAELRAKVFGMNIESELERFIKDMRDPRDINNEQNKRALAAIFFMAKIPAERHSISINELTTDEKRELIKAMNHFRAVVSLFPRRLTMPN*	mmseqs_cdd	nonviral_gene	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0009	cloud	direct	high	341	0.997	GCA_009648895.1_03815
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3966775	3967008	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	5096	5329	GCA_009648895_1_1_3658	GCA_009648895_1_1_3658	+	4408047	.	pfam10809	Protein of unknown function (DUF2732). This family of proteins has no known function.	MRNIETLTTKTGPDDAGLNILLTEARLEERRARAEAMAARLDNLACHITSRQLNHVEAAELLRVTAEAIQNEAQEIH*	mmseqs_cdd	nonviral_gene	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0010	cloud	direct	high	233	0.996	GCA_009648895.1_03816
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3967008	3967235	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	5329	5556	GCA_009648895_1_1_3659	GCA_009648895_1_1_3659	+	4408047	.	PHA00080	DksA-like zinc finger domain containing protein	MTDAMDLVQQRVEEERQRHIRAARAKTPGVSRVLCVECEAPIPPARRRAIPGVQLCITCQEIAELKGKHYNGGAV*	mmseqs_cdd	common_virus	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0011	cloud	direct	high	227	0.996	GCA_009648895.1_03817
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3967232	3968089	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	5553	6410	GCA_009648895_1_1_3660	GCA_009648895_1_1_3660	+	4408047	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MSTILKWAGNKTAIMSELKKHLPAGPRLVEPFAGSCAVMMETDYPSYLVADINPDLINLYKKVAADCESFISRARVLFEIANREVAYYNIRQEFNYSTEITDFMKAVYFLYLNRHGYRGLCRYNKSGHFNIPYGNYKNPYFPEKEIRAFAEKALRATFICASFDETLAMLKAGDVVYCDPPYDGKFSGYHTDGFTEDDQYHLASVLEHRSSEGHPVIVSNSDTSLIRSLYRNFTHHYIKAKRSIGVAAGEGKSATEIIAVSGPRCWVGFDYSRGVDSSAVYGVRA*	common_virus_hmm	common_virus	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0012	cloud	direct	high	857	0.999	GCA_009648895.1_03818
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3968086	3970500	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	6407	8821	GCA_009648895_1_1_3661	GCA_009648895_1_1_3661	+	4408047	.	PFAM:PF05840.12	Rep-protein	MSHADMNNCCGFNEAAASFSWNSPKKAINPYLDPAEVAPVSALSNLITLYAADNEQEQLRREALSDQVWERYFFNESRDPVQREMEQDKLISRAKLAHEQQRFNPDMVILADVNAQPSHISKPLMQRIEYFSSLGRPKAYSRYLRETIKPCLERLEHVRDSQLSTSFRFMASHEGLDGLLILPEMSQDQVKRLSTLVAAHMSMCLDAACGDLYATDDVKPEEIRKTWEKVAAETLRLDVIPPAFEQLRRKRNRRKPVPYELIPGSLARMLCADWWYRKLWKMRCEWREEQLRAVCLVSKKASPYVSYEAVMHKREQRRKSLEFFRSHELVNEDGDTLDMEDVVNASSSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHSTLNNGRPNPTWTNTTVRQSSDYLVGMFAAFRKAMHKAGLRWYGVRVAEPHHDGTVHWHLLCFMRKKDRRAITALLRKFAIREDREELGNNTGPRFKSELINPRKGTPTSYIAKYISKNIDGRGLAGEISKETGKSLRDNAEYVNAWASLHRVQQFRFFGIPGRQAYRELRLLAGQAARQQGDKKAGAPVLDNPRLDAILAAADAGCFATYIMKQGGVLVPRKYHLIRTAYEINEEPTAYGDHGIRIYGIWSPIAEGKICTHAVKWKMVRKAVDVQEAAADQGACAPWTRGNNCPLAENLNQQEKDKSADGDTRTDITCMDDKELHDYLHSMSKKDRRELAARLRLVKPKRRKDYKQRITDHQRQQLVYELKSRGFDGSEKEVELLLRGGSIPSGAGLRIFYRNQRLQEDDKWRNMY*	rep_hall_hmm	common_virus	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0013	cloud	direct	high	2414	1.0	GCA_009648895.1_03819
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3970654	3970842	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	8975	9163	GCA_009648895_1_1_3662	GCA_009648895_1_1_3662	+	4408047	.	.	hypothetical protein	MQDYFLESLKLQRIDFFLKLVAASECSDEEKGLALQWVSELTDELMAKIRTHEYNRSMDVIS*	.	hypothetical_protein	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0014	cloud	direct	high	188	0.995	GCA_009648895.1_03820
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3970853	3971086	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	9174	9407	GCA_009648895_1_1_3663	GCA_009648895_1_1_3663	+	4408047	.	PFAM:PF06183.12	RecA-filament-binding-protein-DinI	MRIEIMIDKEQKISQSILDALESELYRNLRPLYPKTVIRIRKGSSNGVELTGLQLDEERKQVMKIMQKVWEDDSWLH*	phrogs_hmm	hypothetical_protein	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0015	cloud	direct	high	233	0.996	GCA_009648895.1_03821
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3971215	3971955	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	9536	10276	GCA_009648895_1_1_3664	GCA_009648895_1_1_3664	-	4408047	.	PFAM:PF13643.5	DNA-binding-protein	MTVHKLSGAFFHDMQVEWPCPNCNQKTLQIIKESFVSYDTHDTRKFRSEDWFEPEMDSSIFSCMARCSRMQCGEVVACTGKSGWEQGWDEERNDIEYYQWHRPFTFYPSLHPFEIPEKCPEEITEPLEASFSIFLIQPGAAANLIRISVERMLTAMDVAERNDNGKRITLHHRLGMLPELYGSFSRPLMAIKFLGNAGSHTYDEVKVKDIEDAFEIMEYVVNDLFSGRKESVEVLTKRLSEKFKEN*	phrogs_hmm	hypothetical_protein	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0016	cloud	direct	high	740	0.999	GCA_009648895.1_03822
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3972344	3973408	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	10665	11729	GCA_009648895_1_1_3665	GCA_009648895_1_1_3665	+	4408047	.	.	hypothetical protein	MAENGPIEDLAKRISNDLMSRFKWQQHGPCDQDFSCDNETKHKPEGKKQKHTHPVDVVFSYKDPYLNKIIYLNTDLKSYKAGSINATKIESALESLAKTIDCARYSQEWSEKYNFSQIDFEVRGLLFVFNHDNQLQHDFYDFFNPPKPTKGRRDKAVNLEKIPLCAGQQIHIIDPFLINYMLAVTNDMNDLIAKKEFPDEDYGFYYPQLIFHKVAVTEKYLPATIEVLLSPFMIIKHGPVYKFNRAKGIEEMVYPEGFVIYYNRKGNSDNEFFYLLDLLSNYQILDGINKIRIRLAYREKDNRVMSHFQRGIEKYVHEYGLDEEAKKRLEDLDVKVVSTVKEFFSSEVISWEPK*	.	hypothetical_protein	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0017	cloud	direct	high	1064	0.999	GCA_009648895.1_03823
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3973405	3974469	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	11726	12790	GCA_009648895_1_1_3666	GCA_009648895_1_1_3666	+	4408047	.	.	hypothetical protein	MKNIHSVTDKALCDALNQKQITLNEIQDLFLERGTIICKKTPRKDLAKNYSRMTHDYYEHQKIATLLGGQTRAEKNTCVRIESSVTKDDIIVAAEKLKKEITAQDDYCKIIIDGSRVLIDIRYLSTNYSKSDFKQAVNKEALIEIEPIDKGYSIRRPDNENLKDYEDLLLGHIISIQSEQDNDSNLDLKLNEITLAHNSSADVRTLFFDKLIRSLDGYELDDVTDAYVYHPKPETIEAEEGNTETGVHVSKASLKGEGVLKSDELSDLYDRGFYIWKIKWKVKEKLADPDIYELEAQFGDPLNCTNFSYLVKGVKKYKSNGQYFSKPQKLSARETDRFNKLIENRAYSIIMEIS*	.	hypothetical_protein	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0018	cloud	direct	high	1064	0.999	GCA_009648895.1_03824
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3974489	3975184	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	12810	13505	GCA_009648895_1_1_3667	GCA_009648895_1_1_3667	+	4408047	.	.	hypothetical protein	MSQLRLKWMRLKIRTSSEAIFDFIKNTPYSDAIGAGFTKFETIHNGISATFNKKTIMLEPVSDPFGDILEFERIVFEQIGFSIQTLSNKLCLLTFYNPPKTVKSFIDFLSKGEGVNVAYGNLTVDLKAFMKIIREEFGVKVFAISKVKVSNVPVTDKTRACLELNSSGDALNDLKKFVLDNDFKLDKIKVGGLYHDSKFSFELTSGASAIIPEEHVSVFNDAISYMELAKF*	.	hypothetical_protein	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0019	cloud	direct	high	695	0.999	GCA_009648895.1_03825
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3975232	3976269	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	13553	14590	GCA_009648895_1_1_3668	GCA_009648895_1_1_3668	-	4408047	.	CDD:PHA02536	portal-vertex-protein	MGKSKKNRAAAMNHIQHKSQTSAEAFSFGDPVPVLDRRELLDYVECVQMDRWYEPPVSFDGLARTFRAAVHHSSPIAVKCNILTSTYIPHPLLSQQAFSRFVQDYLVFGNAYLEKRTNRFGEVIALEPALAKYTRRGLDLDTYWFVQYGMTTQPYQFTKGSIFHLMEPDINQEIYGLPGYLSAIPSALLNESATLFRRKYYINGSHAGFIMYMTDAAQNQEDVNNLRNAMKSAKGPGNFRNLFMYSPNGKKDGLQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIMPNNVGGFGDVEKASRVFVRNELTPLQQRIKELNEWIGDHVMQFMKYTFDDIN*	hallmark_hmm	common_virus	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0020	cloud	direct	high	1037	0.999	GCA_009648895.1_03826
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3976269	3978035	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	14590	16356	GCA_009648895_1_1_3669	GCA_009648895_1_1_3669	-	4408047	.	CDD:PHA02535	terminase-ATPase-subunit	MNTTLTPADLDPRRQAMLLYFQGYRVARIAEMLGEKVATVHSWKKRDKWGDYGPLDQMQLTTAARYCQLIMKEHKEGKDFKEIDLLARQSERHARIGKFNNGGNEADLNPNVANRNKGPRRQPEKNVFTDEQIEKLEEIFHSSMFNYQRHWWEAGKTNRIRNLLKSRQIGATFYFAREALIDALLTGRNQIFLSASKAQAHVFKQYIIDFAKEVEVELKGDPMVLPNGATLYFLGTNARTAQSYHGNLYLDEYFWIPKFQELRKVASGMAIHKKWRQTYFSTPSSLTHSAYPFWSGALFNRGRNKADKVDIDLSHSNLAPGLLCADGQYRQIVTVEDAVRGGCNLFDLDQLRMEYSPDEYQNLLMCEFVDDLASVFPLSELQACMVDSWEVWTDFHALALRPFGWREVWIGYDPAKGTQNGDSAGCVVVAPPAVPGGKFRILERHQWRGMDFRAQADAIKKLTEQYNVTYIGIDSTGVGHGVYENVKAFFPAVREFVYNPNVKNALVLKAYDIISHRRLEFDAGHTDIAQSFMAIRRATTASGNRPTYEASRSEEASHADLAWATMHALFNEPLQGESANTSNIVEIF*	hallmark_hmm	common_virus	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0021	cloud	direct	high	1766	0.999	GCA_009648895.1_03827
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3978085	3979068	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	16406	17389	GCA_009648895_1_1_3670	GCA_009648895_1_1_3670	+	4408047	.	PDB:3D37_A	Tail-protein	MVNRGFEADQLDLELDDADGKIALPRRGAVITLALGWKGQPLFPKGAFTVDEIEHTGAPDRLTIRARSADFRETLNTRREKSWHKTTVGEVVKEIAARHKLKMALGKDLSNKPVDHIDQTNESDGSFLMRLARQYGAIASVKNGNLLFIRQGQGKSASGKPLPVITITRKDGDSHRFTLADRGAYTGVIASWLHTREPEKKESTTVKRKRRTKKQKKEPEAKQGDYLVGTDENVLVLNRTYANRSNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMPVKVSGFKQPIDDAEWTITTLTHTVSPDNGFTTSLELEVKIDDFEIE*	common_virus_hmm	common_virus	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0022	cloud	direct	high	983	0.999	GCA_009648895.1_03828
GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote	cenote	CDS	3979159	3979377	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C156	17480	17698	GCA_009648895_1_1_3671	GCA_009648895_1_1_3671	+	4408047	.	PRK09678	DNA-binding transcriptional regulator; Provisional	MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQPHPMKSGQVALSL*	mmseqs_cdd	nonviral_gene	C156	17698	3961680	3979378	GCA_009648895.1|CP045778.1@region_3961681_3979378@tool_cenote_CDS_0023	cloud	direct	high	218	0.995	GCA_009648895.1_03829
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	tRNA	983132	983208	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	6375	6451	tRNA-Pro	tRNA-Pro	+	4408047	.	tRNAscan-SE score: 67.9	Pro	NA	tRNAscan-SE	.	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote	cenote	tRNA	1023306	1023376	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C32	46549	46619	tRNA-Pro	tRNA-Pro	+	4408047	.	tRNAscan-SE score: 21.7	Pro	NA	tRNAscan-SE	.	C32	48586	976758	1025344	GCA_009648895.1|CP045778.1@region_976759_1025344@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote	cenote	tRNA	3380190	3380281	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C130	16141	16232	tRNA-Ser	tRNA-Ser	+	4408047	.	tRNAscan-SE score: 21.9	Ser	NA	tRNAscan-SE	.	C130	30614	3364050	3394664	GCA_009648895.1|CP045778.1@region_3364051_3394664@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote	cenote	tRNA	3667092	3667168	GCA_009648895.1	CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895.1_CP045778.1	GCA_009648895.1|CP045778.1	GCA_009648895_1_1	GCA_009648895_1_1@C142	1290	1366	tRNA-Arg	tRNA-Arg	+	4408047	.	tRNAscan-SE score: 82.7	Arg	NA	tRNAscan-SE	.	C142	12821	3665803	3678624	GCA_009648895.1|CP045778.1@region_3665804_3678624@tool_cenote_tRNA_0001	.	.	.	.	.	.