core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_009710745.1|WMKM01000022.1@region_1_2456@tool_cenote	cenote	CDS	1	84	GCA_009710745.1	WMKM01000022.1	GCA_009710745.1|WMKM01000022.1	GCA_009710745.1_WMKM01000022.1	GCA_009710745.1|WMKM01000022.1	GCA_009710745_1_14	GCA_009710745_1_14	2	85	GCA_009710745_1_14_1	GCA_009710745_1_14_1	+	2456	.	.	hypothetical protein	FTGIQGDENDDTVTNYYTYVRCMENAK*	.	hypothetical_protein	NaN	.	0	2456	GCA_009710745.1|WMKM01000022.1@region_1_2456@tool_cenote_CDS_0001	cloud	ambiguous	low	10	0.119	GCA_009710745.1_00397
GCA_009710745.1|WMKM01000022.1@region_1_2456@tool_cenote	cenote	CDS	74	439	GCA_009710745.1	WMKM01000022.1	GCA_009710745.1|WMKM01000022.1	GCA_009710745.1_WMKM01000022.1	GCA_009710745.1|WMKM01000022.1	GCA_009710745_1_14	GCA_009710745_1_14	75	440	GCA_009710745_1_14_2	GCA_009710745_1_14_2	+	2456	.	PFAM:PF04883.11	type-I-neck-protein	MPSNKNGFSEISDYLGNLSRVDPKKLSLESLEEAAKFYLEQLLPNIPKSLLKKKHMSEQIKVVVEEDRVKVQFEETAFYWRFTENGTTKQKAQHFASGTYEQNKEKIEEIMTKKILDLWEG*	hallmark_hmm	common_virus	NaN	.	0	2456	GCA_009710745.1|WMKM01000022.1@region_1_2456@tool_cenote_CDS_0002	cloud	direct	high	365	0.997	GCA_009710745.1_00397
GCA_009710745.1|WMKM01000022.1@region_1_2456@tool_cenote	cenote	CDS	446	1072	GCA_009710745.1	WMKM01000022.1	GCA_009710745.1|WMKM01000022.1	GCA_009710745.1_WMKM01000022.1	GCA_009710745.1|WMKM01000022.1	GCA_009710745_1_14	GCA_009710745_1_14	447	1073	GCA_009710745_1_14_3	GCA_009710745_1_14_3	+	2456	.	PFAM:PF04630.11	major-tail-protein	MGKQDTFYFEGLDDILIAMMATPDSVGTAPTYSEVVRLPIATKIGVKGNGTALEKWASSKMFRRVSRETKHEIALDHVGIPIAVMDEIKGLVAKSGVTFSKNTAREFPYFAFGFIGNIENGGKKAVWYPNTQLSNVIDEEYATAEEETKIDDVTANLVSIGLKYNNVMYASFDSNRDGASLELFNKFIAQPVYDEEQWKTLAKVGGAG*	hallmark_hmm	common_virus	NaN	.	0	2456	GCA_009710745.1|WMKM01000022.1@region_1_2456@tool_cenote_CDS_0003	cloud	direct	high	626	0.998	GCA_009710745.1_00398
GCA_009710745.1|WMKM01000022.1@region_1_2456@tool_cenote	cenote	CDS	1072	1536	GCA_009710745.1	WMKM01000022.1	GCA_009710745.1|WMKM01000022.1	GCA_009710745.1_WMKM01000022.1	GCA_009710745.1|WMKM01000022.1	GCA_009710745_1_14	GCA_009710745_1_14	1073	1537	GCA_009710745_1_14_4	GCA_009710745_1_14_4	+	2456	.	PFAM:PF12363.7	tail-assembly-chaperone	MARLSDYGINVEDLKNSATVTIQGVEFPISFTMQTMEFIADVYGGDYSQFESDMNAMLYKKEGKISSANLSPSDLKIMRALIYAMLRTGGLDEDPETIFKFLGMSGEVLSAYSTCMEIFASQTFQVEDLKKSKKPQDFQKTQAKRKVNKKNRKR*	phrogs_hmm	hypothetical_protein	NaN	.	0	2456	GCA_009710745.1|WMKM01000022.1@region_1_2456@tool_cenote_CDS_0004	cloud	direct	high	464	0.998	GCA_009710745.1_00399
GCA_009710745.1|WMKM01000022.1@region_1_2456@tool_cenote	cenote	CDS	1731	2453	GCA_009710745.1	WMKM01000022.1	GCA_009710745.1|WMKM01000022.1	GCA_009710745.1_WMKM01000022.1	GCA_009710745.1|WMKM01000022.1	GCA_009710745_1_14	GCA_009710745_1_14	1732	2454	GCA_009710745_1_14_5	GCA_009710745_1_14_5	+	2456	.	PFAM:PF13406.5	tail-length-tape-measure-protein	MAGKESDVVLNFKTNGEVSYSKTIKEINKEMNLAAAEYKNQVSAMDKDATQTEKLRAAKQKLEKQLGLAEQRSQMLREEYEKSVKETGEYSAESEKLYKQLLNSETGENKLRTALEQTNDALKEQGDVSVDTAKKLQKIEETGEKVKGVGEKMSVGVTAPIVAAGAAGLAAFGEVDEALDTIITKTGATGDQADRLSQSFKNVGSNTHLPLQTVGEAIGEVNTQFGFMDKKLEDSTNYLLQ	phrogs_hmm	hypothetical_protein	NaN	.	0	2456	GCA_009710745.1|WMKM01000022.1@region_1_2456@tool_cenote_CDS_0005	.	unmatched_CDS	none	0	0	.
GCA_009710745.1|WMKM01000029.1@region_1_2018@tool_cenote	cenote	CDS	1	224	GCA_009710745.1	WMKM01000029.1	GCA_009710745.1|WMKM01000029.1	GCA_009710745.1_WMKM01000029.1	GCA_009710745.1|WMKM01000029.1	GCA_009710745_1_21	GCA_009710745_1_21	1	225	GCA_009710745_1_21_1	GCA_009710745_1_21_1	-	2018	.	.	hypothetical protein	MNKKLLKKLQARHEQRLTELRGRIESGEVREADLEAVKEEIDSVIDELNGIKDELGADSGTDETDDNTDDQSNST	.	hypothetical_protein	NaN	.	0	2018	GCA_009710745.1|WMKM01000029.1@region_1_2018@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_009710745.1|WMKM01000029.1@region_1_2018@tool_cenote	cenote	CDS	236	814	GCA_009710745.1	WMKM01000029.1	GCA_009710745.1|WMKM01000029.1	GCA_009710745.1_WMKM01000029.1	GCA_009710745.1|WMKM01000029.1	GCA_009710745_1_21	GCA_009710745_1_21	237	815	GCA_009710745_1_21_2	GCA_009710745_1_21_2	-	2018	.	PFAM:PF04586.16	prohead-serine-protease	MEMKKKEIRTFDITNLSTRDVTENNSRIVTGYAAVFNSRTLLWEGLEEVISPGAFSKALSNSDVRCLFDHDWGKVLGRTKSGTLRLEEDERGLKFEVELPNTTDANNLIESMSRGDIDQCSFGFIPTEETWDYNTDPVLRTVNEVELFEVSIVSLPAYQDTEAALARSKQEVQQDIATRKKMIQKINGALNA*	hallmark_hmm	common_virus	NaN	.	0	2018	GCA_009710745.1|WMKM01000029.1@region_1_2018@tool_cenote_CDS_0002	cloud	direct	moderate	573	0.99	GCA_009710745.1_00415
GCA_009710745.1|WMKM01000029.1@region_1_2018@tool_cenote	cenote	CDS	780	2015	GCA_009710745.1	WMKM01000029.1	GCA_009710745.1|WMKM01000029.1	GCA_009710745.1_WMKM01000029.1	GCA_009710745.1|WMKM01000029.1	GCA_009710745_1_21	GCA_009710745_1_21	781	2016	GCA_009710745_1_21_3	GCA_009710745_1_21_3	-	2018	.	CDD:pfam04860	Portal-protein	EILKLRDRLSNAVYSFMEKRGYIEDMFGHYTRYGQRYVTDSSIMESSDVYELVQDISNQVALSSPVVIGPDGNEVKDHHLLKILKNPNDYLTGFEFTKLETNTLLINGETFPLTDRDQLHLAYGVTTKINERLQEEFEMNGQKIPGQMIRHIKNIGTDSLKGAGIIDLARNTLEGVLSAEKVLTDKYTKGGLLAFMLKLDAHINPNNSAQTKIVKAILDQLEGTQNDSDHSVKMIPLGKGYSIETLKSPVDDAAILNYLGVYKKDLGKFLGINVDTYQSLMKTDIEKAMMYLHNKAIKPILKNKSEHYTALFFMPNSGYRVEWKINILDFVPYSTKTNIGYNIVRTGITSPDNVAEMLGFPKQNTPETQAIYISNDLSRIGQKNATDDSLPTNDQNVKGGDGNEKEGNSDI*	hallmark_hmm	common_virus	NaN	.	0	2018	GCA_009710745.1|WMKM01000029.1@region_1_2018@tool_cenote_CDS_0003	cloud	direct	high	1230	0.995	GCA_009710745.1_00416
GCA_009710745.1|WMKM01000030.1@region_1_1866@tool_cenote	cenote	CDS	28	1755	GCA_009710745.1	WMKM01000030.1	GCA_009710745.1|WMKM01000030.1	GCA_009710745.1_WMKM01000030.1	GCA_009710745.1|WMKM01000030.1	GCA_009710745_1_23	GCA_009710745_1_23	29	1756	GCA_009710745_1_23_1	GCA_009710745_1_23_1	-	1866	.	PFAM:PF03354.14	Large-Terminase	MIEPGVNYADLFAKEVRKKPGKYPKTVRLAVDRWYRWKKRKDIWFDVDRANEMMDWVESFIVHTKGEMVGKPFILEPWEKFIYSWMYGWVKENEKGQIVRVTREAYVQIPKKNGKTLIAVGSLGYAMYGEGALSVDCYACASDFAQAQYAAKPFAATILNNPILLEGTKIFKGPKGTVSSITYDYIHEDMAYSNKFIVQTKNIDNIEGSNPYFVLNDELHKQEKMEQYDNFKSAQISLPQPLMFNISTAGKGSSSVGMRVYREAKEVLKRDDNDSNFVLIYEPNKNYDWTDRKVWEMCNPNWGISVDLSALESAFKTAQRSAHSKAEFLTKHLDVFVNGADNFFEQDQVEPCLVQSAELGNLIGEPCYIGLDLSRTKDLTCVSLNFPTWDEDGKAILKVKQLYFIPNENLDFREKEDNVPYRELSEQGFVEFCDGKQIDQEQILQYIEDCMDLYDIQQINYDPAMSEKLVEKFENLGLECVEVPQYPRVLNSPFDDVERLFYERRVLFDNPLLLYCTLNVVAITNMNGQKGPSKRQSKKKIDGFVAFLCAHKETMNQMNDINSDDLDDYLSSIYR*	hallmark_hmm	common_virus	NaN	.	0	1866	GCA_009710745.1|WMKM01000030.1@region_1_1866@tool_cenote_CDS_0001	cloud	direct	high	1727	0.999	GCA_009710745.1_00745
GCA_009710745.1|WMKM01000030.1@region_1_1866@tool_cenote	cenote	CDS	1752	1865	GCA_009710745.1	WMKM01000030.1	GCA_009710745.1|WMKM01000030.1	GCA_009710745.1_WMKM01000030.1	GCA_009710745.1|WMKM01000030.1	GCA_009710745_1_23	GCA_009710745_1_23	1753	1866	GCA_009710745_1_23_2	GCA_009710745_1_23_2	-	1866	.	.	hypothetical protein	GGSTARKDEEITRPEEKPVDELAAHRNKWRKKAGTEK*	.	hypothetical_protein	NaN	.	0	1866	GCA_009710745.1|WMKM01000030.1@region_1_1866@tool_cenote_CDS_0002	cloud	ambiguous	low	5	0.044	GCA_009710745.1_00745
GCA_009710745.1|WMKM01000036.1@region_1_1615@tool_cenote	cenote	CDS	1	693	GCA_009710745.1	WMKM01000036.1	GCA_009710745.1|WMKM01000036.1	GCA_009710745.1_WMKM01000036.1	GCA_009710745.1|WMKM01000036.1	GCA_009710745_1_29	GCA_009710745_1_29	2	694	GCA_009710745_1_29_1	GCA_009710745_1_29_1	+	1615	.	PFAM:PF10145.8	minor-tail-protein	FVLAYNKVKWFRDGVNAFFQGISDIAVQVFNFLGGFIGGVFGGIIANFNNYFNAGKRIFNGFLDFITGVFTGNWSKAWEGVVNIFGGIFDGIVAIAKAPINGLIGLINDFIGLANKIKVPKGVPIVGGKGIHFDKIPYLAKGGHLINGQAIVGEAGPELLTAKNGKTTVTPLSDEEKRKGISGRVSGGSIEQHIHIGKVDANNPSELDRMNRKFAKANKQAIRDLGGVPI*	hallmark_hmm	common_virus	NaN	.	0	1615	GCA_009710745.1|WMKM01000036.1@region_1_1615@tool_cenote_CDS_0001	cloud	direct	moderate	686	0.99	GCA_009710745.1_00751
GCA_009710745.1|WMKM01000036.1@region_1_1615@tool_cenote	cenote	CDS	705	1409	GCA_009710745.1	WMKM01000036.1	GCA_009710745.1|WMKM01000036.1	GCA_009710745.1_WMKM01000036.1	GCA_009710745.1|WMKM01000036.1	GCA_009710745_1_29	GCA_009710745_1_29	706	1410	GCA_009710745_1_29_2	GCA_009710745_1_29_2	+	1615	.	PDB:2X8K_A	Distal-Tail-Protein	MNPDEPNFIWKNRNAVIDMDCIIEVELPDIMPNKRYETYTVQGRSGELTETFDDYEPFDLEIEGITIPHSKLREVKRWLTGKSQLITHNDPDKYLDAICSMDKEVPFENEWGFFYTFDVTFRCQPLKKKLNEQPIIITESREDIFDPGDKVAKPYFEIVSEGGHLSLTIGTKTLLVENTLAGVVKIDTELGKAIQEDAPLFTRGDWPTLNPGKNQLIISGKYKEIKVWNRSVYL*	hallmark_hmm	common_virus	NaN	.	0	1615	GCA_009710745.1|WMKM01000036.1@region_1_1615@tool_cenote_CDS_0002	cloud	direct	high	705	1.0	GCA_009710745.1_00752
GCA_009710745.1|WMKM01000036.1@region_1_1615@tool_cenote	cenote	CDS	1406	1612	GCA_009710745.1	WMKM01000036.1	GCA_009710745.1|WMKM01000036.1	GCA_009710745.1_WMKM01000036.1	GCA_009710745.1|WMKM01000036.1	GCA_009710745_1_29	GCA_009710745_1_29	1407	1613	GCA_009710745_1_29_3	GCA_009710745_1_29_3	+	1615	.	.	hypothetical protein	MTQEFIYAYKKMPDDLSVNGASLVDWEDLPEINRVLNGQYRFYGNYSRSGQYRSYLKKGNFIKAKVPNG	.	hypothetical_protein	NaN	.	0	1615	GCA_009710745.1|WMKM01000036.1@region_1_1615@tool_cenote_CDS_0003	cloud	ambiguous	low	5	0.024	GCA_009710745.1_00752
GCA_009710745.1|WMKM01000045.1@region_1_1351@tool_cenote	cenote	CDS	218	442	GCA_009710745.1	WMKM01000045.1	GCA_009710745.1|WMKM01000045.1	GCA_009710745.1_WMKM01000045.1	GCA_009710745.1|WMKM01000045.1	GCA_009710745_1_39	GCA_009710745_1_39	219	443	GCA_009710745_1_39_1	GCA_009710745_1_39_1	+	1351	.	.	hypothetical protein	MNKRIKKKRAILLCIQGLITVNNKLIDKIEHRQKQIEELKHINSRNAQATNSRFDYLEKKVADKVSKKSWVSRK*	.	hypothetical_protein	NaN	.	0	1351	GCA_009710745.1|WMKM01000045.1@region_1_1351@tool_cenote_CDS_0001	cloud	direct	high	224	0.996	GCA_009710745.1_01231
GCA_009710745.1|WMKM01000045.1@region_1_1351@tool_cenote	cenote	CDS	608	1201	GCA_009710745.1	WMKM01000045.1	GCA_009710745.1|WMKM01000045.1	GCA_009710745.1_WMKM01000045.1	GCA_009710745.1|WMKM01000045.1	GCA_009710745_1_39	GCA_009710745_1_39	609	1202	GCA_009710745_1_39_2	GCA_009710745_1_39_2	+	1351	.	PDB:6B0X_d	capsid-scaffolding-protein	MAEEIKKDEVVEEGTEQASTQEQAETTEKTFTQEELDAIIQKEKGKAKRAAEREYQAKMDEAEKLRKMNAEQKAEYEAKKQADYIAELEAKINRSGLEKEASKMLSEAGIVATDDILAFVVKDDAESTQETINSFTSLVNDLADKKVSEMLKGKTPKKVEQSTAGGVTKEQFARMGYKSRNDLLQSDPELYAKLVNG*	hallmark_hmm	common_virus	NaN	.	0	1351	GCA_009710745.1|WMKM01000045.1@region_1_1351@tool_cenote_CDS_0002	cloud	direct	high	593	0.998	GCA_009710745.1_01232
GCA_009710745.1|WMKM01000045.1@region_1_1351@tool_cenote	cenote	CDS	1208	1348	GCA_009710745.1	WMKM01000045.1	GCA_009710745.1|WMKM01000045.1	GCA_009710745.1_WMKM01000045.1	GCA_009710745.1|WMKM01000045.1	GCA_009710745_1_39	GCA_009710745_1_39	1209	1349	GCA_009710745_1_39_3	GCA_009710745_1_39_3	+	1351	.	PDB:4AN5_F	Major-Capsid-protein	MTQTKIAQMINPEVMADMASAKLPKLIKFTPLAYVERELVGQPGNTL	hallmark_hmm	common_virus	NaN	.	0	1351	GCA_009710745.1|WMKM01000045.1@region_1_1351@tool_cenote_CDS_0003	.	unmatched_CDS	none	0	0	.
GCA_009710745.1|WMKM01000056.1@region_1_1070@tool_cenote	cenote	CDS	2	715	GCA_009710745.1	WMKM01000056.1	GCA_009710745.1|WMKM01000056.1	GCA_009710745.1_WMKM01000056.1	GCA_009710745.1|WMKM01000056.1	GCA_009710745_1_51	GCA_009710745_1_51	3	716	GCA_009710745_1_51_1	GCA_009710745_1_51_1	+	1070	.	PDB:3GS9_A	tail-protein	SGRVYMINLMTKAGISDNPDTITAQFKLLMWHAPNGQWIATSAYPYSWTQFMTLTDINTAAQAFVANFERPRDPHPERTTWAQEWYDKFKDLEIPASKGYVKPIADPITVTSEFGWRTSPITGAQEFHNGIDLVNGNPNTPIFASADGEVIVAGDANYFDWYGNWTVIKHADGMYTGYAHQSRVDVSKGQKVTASQQIGLMGTTGPSTGEHLHFQFMDEFYPSSAAHFHNARDYISF*	common_virus_hmm	common_virus	NaN	.	0	1070	GCA_009710745.1|WMKM01000056.1@region_1_1070@tool_cenote_CDS_0001	cloud	direct	moderate	698	0.978	GCA_009710745.1_01479
GCA_009710745.1|WMKM01000056.1@region_1_1070@tool_cenote	cenote	CDS	731	1069	GCA_009710745.1	WMKM01000056.1	GCA_009710745.1|WMKM01000056.1	GCA_009710745.1_WMKM01000056.1	GCA_009710745.1|WMKM01000056.1	GCA_009710745_1_51	GCA_009710745_1_51	732	1070	GCA_009710745_1_51_2	GCA_009710745_1_51_2	+	1070	.	PDB:4DIV_C	Distal-Tail-protein	MPKHKIILSTTEPNNNIPLIRIIQDDKNSQIFEAEIVEEGQLLDFDNKVVFFNAQIGPYKVRDKVETIYYDSSRVSYTLIDPFLQKVGEFEAWFSFADNEEPESDLFSTMRFN	hallmark_hmm	common_virus	NaN	.	0	1070	GCA_009710745.1|WMKM01000056.1@region_1_1070@tool_cenote_CDS_0002	.	unmatched_CDS	none	0	0	.