core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	genomad_gene	genomad_length	genomad_strand	genomad_gc_content	genomad_genetic_code	genomad_rbs_motif	genomad_marker	genomad_evalue	genomad_bitscore	genomad_uscg	genomad_plasmid_hallmark	genomad_virus_hallmark	genomad_taxid	genomad_taxname	genomad_annotation_conjscan	genomad_annotation_amr	genomad_annotation_accessions	genomad_annotation_description	genomad_element_name_std	genomad_element_name_orig	genomad_element_gene_wrt_to_contig	genomad_element_gene_wrt_to_element	genomad_element_gene_start	genomad_element_gene_end	genomad_protein_translation	genomad_phage_region_id	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	543654	544001	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_557	348	1	0.460	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	557	1	1	348	MNPLIQSLTEGQLRTDIPAFRPGDTVRVHAKVVEGTRERIQIFEGVVIARKGAGISETYTVRKISNGIGVERTFPIHTPRVDKIEVVRYGKVRRAKLYYLRALQGKAARIKEIRR	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0001	persistent	direct	high	348	1.0	GCA_009932775.1_00578
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	544161	545231	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_558	1071	-1	0.438	11	AGGAG	GENOMAD.161534.VP	6.992e-32	131	0	0	0	1246	Caudoviricetes	NA	NA	PF12684;TIGR01896	PDDEXK-like domain of unknown function (DUF3799)	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	558	2	508	1578	MASYRKRDGSWEYRISYKTADGKYKQKSKRGYRTKAEAQRAAAEVERELSGRLEIDEAVTLADYFDQWAEIHKKPHVSTVTWKVYQYTSKKIKKYFGKARLRQITASAYQQVLNDHSATHAQDTVERFNIHIKQAVAMALHEGVITKDFTAFAKIKSIKKGLEAETKFLELPEYLQVIQTCKTKMDVQSYALIYIIAITGMRFAEALGLTWDDIDTEDKTLEVNKTWDYKYGLGFKPTKTKSSIRKIPLNDDALKVLADYKAKNWKENADNRLFSHISNNAVNKSLKKIVGRDVHVHSLRHTYASFLILNHVELLSISKILGHENMNITIEVYSHQLKQLEQESNDEIRNIFDNFG	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0002	cloud	direct	high	1071	1.0	GCA_009932775.1_00580
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	545273	545623	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_559	351	-1	0.422	11	AGGAG	GENOMAD.142683.VV	1.46e-30	117	0	0	0	1246	Caudoviricetes	NA	NA	PF11446;TIGR04165;COG4888	Cys-rich peptide, TIGR04165 family	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	559	3	1620	1970	MGIKGFLKAKTIGEYLQAKKDPELMKEIEGRSIGKVLSQAADVAAQQKLEKNAIKCPHCRSKNVMFMQQGKKGFSVGKAVGGAVLTGGVGTLAGFAGKKGKKQWHCQDCGNVFETK	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0003	cloud	direct	high	351	1.0	GCA_009932775.1_00581
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	545653	546525	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_560	873	-1	0.408	11	AGGAG	GENOMAD.108504.VP	2.42e-11	67	0	0	0	1246	Caudoviricetes	NA	NA	PF05866;PF00717;COG4570;TIGR02754	Endodeoxyribonuclease RusA; Peptidase S24-like	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	560	4	2000	2872	MKSSLGNKEVMAANIRRHIDKLGLNVKDFSREIGVSYSTVRDWANAVTYPRIDKIEMMANYFGVNKSDLVEIKAEDSTLDKITTAASKLEEERQEKVLGYCEDQLSEQERGSRELPTVDERFTNVTDIYRRLTPDRQEEARRSMNRQLRSQNIVKMEEIQKAQDLYESLGEEFEDVGLYGEVSAGTGVWVSDEPVEIIKYPVPVPNHDIALRVNGNSMEPMFHDGDVVFVKKTPEVHHGSIIIIIVNDSAYIKKLYRRDDEVRLISLNPQYEDIILNPDDTIEIIGNVIM	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0004	cloud	direct	high	873	1.0	GCA_009932775.1_00582
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	546691	546888	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_561	198	1	0.328	11	GGAGG	GENOMAD.159297.VP	5.023e-05	41	0	0	0	1246	Caudoviricetes	NA	NA	PF05339;TIGR00673;K22299;COG3655	cyanase	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	561	5	3038	3235	MPEWTLKTLRINNNLSQAEAAEKLGISPSKLSNWEKSKTFPDVPEIMKIEKLYGISYADIKFLPN	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0005	cloud	direct	high	198	1.0	GCA_009932775.1_00583
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	547323	548087	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_562	765	1	0.442	11	GGA/GAG/AGG	GENOMAD.048402.VV	3.29e-20	93	0	0	0	1246	Caudoviricetes	NA	NA	COG3645	Phage antirepressor protein YoqD, KilAC domain	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	562	6	3670	4434	MNEIFNFQGQQVRTVTINGEPYFVGKDTADILGYQNGSRDINRHVDEEDKLKYRFGTSGQDREMIIINESGLYALILGSKLPQAKEFKRWVTSEVLPTIRRHGAYLTDSKIEEVLLSPDTIINLATQLKNERAEKEQLKIELEEARKQTSYLDLILQTKDQLTTTQIAQDYGMSASKFNQLLKDLRIQRKVNSQWVLYKQYLGKGYIASRTFEYIGRDDRCHSKITTVWTQLGRKFLYDVLKEREGILPLVEQE	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0006	cloud	direct	high	765	1.0	GCA_009932775.1_00584
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	548090	548374	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_563	285	1	0.467	11	AGGAG	GENOMAD.069086.VV	3.759e-19	83	0	0	0	1246	Caudoviricetes	NA	NA	PF12964;COG3311	Prophage CP4-57 regulatory protein (AlpA)	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	563	7	4437	4721	MSQDYIQAFANDITDRVRSSLVEVSKHFDIEEALPLELTQKQLTQMLGCSTSTLSRYLKFKDFPKIDRGKGTSVKYPRDAVREWYNSHWREFSE	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0007	cloud	direct	high	285	1.0	GCA_009932775.1_00585
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	548394	548687	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_564	294	1	0.337	11	AGGAG	GENOMAD.046297.VV	6.626e-38	137	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	564	8	4741	5034	MLDKYEIPQIDIQCQEFFKDDKSFGMFERHEYHFENGYGASIIHNADSYGLELAVLRKNNNNRWELTYSTPITDDVVGYISGGEELKKLLEDIKNLK	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0008	cloud	direct	high	294	1.0	GCA_009932775.1_00586
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	548697	548957	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_565	261	1	0.456	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	565	9	5044	5304	MEPTLGSQIMGVALIATIAFFAGWYGNRMDARKRAKKERLLRMQAELVAQYEEDMRLYHEEQRQAEMDALAMARKGITPAFEYLEV	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0009	cloud	direct	high	261	1.0	GCA_009932775.1_00587
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	548961	549137	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_566	177	1	0.435	11	GGAG/GAGG	GENOMAD.052116.VV	6.701e-20	83	0	0	0	1246	Caudoviricetes	NA	NA	PF06156	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	566	10	5308	5484	MEQELLDEIDRWRSEYIHLGHELGEVINEQQDRILALSQENKRLKRENWNLKRTKRRK	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0010	cloud	direct	high	177	1.0	GCA_009932775.1_00588
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	549137	549622	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_567	486	1	0.444	11	AGGAG	GENOMAD.101167.VV	6.25e-26	106	0	0	0	1246	Caudoviricetes	NA	NA	COG1694	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	567	11	5484	5969	MELKELIENVQQWSKDRGLDKADSRKQLLKLYEEFGELVQGHLKGNIEQVKDSIGDMLVVEIIYCQQSGIELGSLYVEQPTSPHGMTTLLCDIAISIGDLSGNFGPRTNKRNIQEINRYLQIISIRYGTTLEACLELAWNEIKDRKGKMVDGVFVKEEDLK	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0011	cloud	direct	high	486	1.0	GCA_009932775.1_00589
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	549619	550005	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_568	387	1	0.382	11	AGGAG	GENOMAD.142864.VV	3.207e-19	85	0	0	0	1246	Caudoviricetes	NA	NA	PF09643	YopX protein	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	568	12	5966	6352	MIPKFRAWVKEDKEMWPIHAIVFDNKTVWVEEPDDENPSGCLDFDDVILMQSTGLKDKNGKEIFEGDVAYNGFRKTIVNYGKQAIEEEFGAIREYVGFNLTLACGYPEAVPMNYEIIGNIYENPELLE	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0012	cloud	direct	high	387	1.0	GCA_009932775.1_00590
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	550037	550372	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_569	336	1	0.321	11	AGGAG	GENOMAD.063172.VV	5.18e-47	164	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	569	13	6384	6719	MENIMFWSMFSACLMIIAMTMFALHLQAKVNNDLRRKYNDLRRELIKSFGWDDYEWSNNFRDYAREVETLIKFKKEIERLDIIKKAIDAQNLSDLKNKKEQIEREIKNLGN	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0013	cloud	direct	high	336	1.0	GCA_009932775.1_00591
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	550386	551717	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_570	1332	1	0.455	11	AGGA	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	570	14	6733	8064	MKNTIKLSAIAFAAVSGLLISNHVLASEVSKTGTEITVTEPTVEVQKQGDSFYDKVDVTVKTDIPDDVEINQGDTLTMPLPQELELETNYEFPVTNNEGAEVGQATANAKENNVTTVFNDYFKEHPLNKSISLNLLTKINSEIVREEGKMDLNFSGTIVEMESGSKGDTNPNEELYKWGYQDKEDPNVVHWVARINYRKATMNRVSVSDTWDNEARYVPGSMKISYLHSANPWTYAWPGNMDMLSMRENGFDYYVGFLNNVLVFEYSTRYATQATVPVNTIKVTANDYWIEHKVDYKWVSGSGTADGKNRPKPIWEIPNEAPQVDKPELNINDIPMMPPAPILDKPELDLNDVPLLPPAPILDLPELVIPDEPKKPELPPKTLEKEPPAPSAKEERKNATDSKLEVSANELPKTGEVSNVFLSIFGISLLISGAMIWQDNKKK	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0014	cloud	direct	high	1332	1.0	GCA_009932775.1_00592
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	551728	552237	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_571	510	1	0.331	11	GGAG/GAGG	GENOMAD.169311.VP	1.128e-31	123	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	571	15	8075	8584	MPNWSEGTMKIRGPIDNVINYISEAFVYIDSQGQKIETTQIVTVSDNFSDFYTITLKPDERESQKKVDGLYIEGTTRGFIDTTRFSLDFWREGEELIVEIQNFKQAWKVDAQEYVWLSKKNEVDLKIFAFEKGSEFTQIIEIIKGKITIDLKQKYLNYNWEVPFNGLGG	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0015	cloud	direct	high	510	1.0	GCA_009932775.1_00593
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	552287	553615	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_572	1329	1	0.472	11	GGAG/GAGG	GENOMAD.068048.VV	5.343e-13	74	0	0	1	1246	Caudoviricetes	NA	NA	PF20307;TIGR03600;K02314;COG0305	phage replicative helicase, DnaB family, HK022 subfamily	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	572	16	8634	9962	MTEVSRLIPQDIPSEKAVLGSVFIAPDKLLTAAELVQPSDFYYPANQTIFKAMLELADKGQAIDPLTIRNLLDSRGEFEPAGGMAYLTELVTAVPTSANIEYYAKNVADKAIARSVINDLTDSIAAVYNSDAGIDEIISKTEQSLINASSSRNKSSFKHIHDVIETAQVKIEERASMSSDVTGTPTGFHDFDKITTGLHEDNLIILAARPAMGKTALALNIAQNVAVKAKKAVAVFSLEMGSESLVERMLAAEGNVMSYHIRTGKLSKNEWQRLIYAQAQLAEAKIYIDDTPGIRVTEIRSRARKLAQETDGLGLIVIDYLQLITGNNPKNRQQEVSEISRQLKILAKELNVPVIALSQLSRNVEQRQDKRPVLSDLRESGSIEQDADIVAFLYREAYYDKSDDGPENNKVELILEKNRHGSLGTVQLFFHKEYTKFTNVEE	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0016	cloud	direct	high	1329	1.0	GCA_009932775.1_00594
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	553618	554397	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_573	780	1	0.412	11	GGAGG	GENOMAD.182190.VP	1.759e-16	82	0	0	0	1246	Caudoviricetes	NA	NA	PF20008;TIGR02220	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	573	17	9965	10744	MAERRMVSKTVTQTQKFLRLPLEAQALYFHLILNSDDDGIVEAFPVVRMIGSSEDSLGLLVIKQFIKPLGEDMVYFITDFNEQNKIRPDRHKPSIHRDLAVEKLGLEVDGNRLIDTTKTASPKALSSCQTSDGQATDKCPHSIGKDSIVEYSIDKDSVEQSPPYEEIISYLNQKLGTKYSHTSRDTKKHIQARFRDGFTLDDFKYVIDVKVSEWGNDPKMSSYLRPKTLFGTKFESYLNQKLPNGFQKQADVVDERLGF	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0017	cloud	direct	high	780	1.0	GCA_009932775.1_00595
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	554397	555209	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_574	813	1	0.435	11	GGA/GAG/AGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	574	18	10744	11556	MDFKEFDKKETSSRVCDRHRCKMWRMPIVVEGKQIILEQCPKCTQGMIEDYERELNKEAKISSKLAESYAIFDKYSLQPPELRGKTLENFQADSRSVDKSALNFAKRMINHYLKDGTGNCIVTGPPGVGKSHLTIGMAKFLNEAFKKMDNPKSVLFISVLRLFTEIEQSFGGQGGLTEADAVDLLSRVDFLFLDDLGKESRMSDSAKQANEWRQRVLFKILDNRQTTIINTNLTSQEIKRIYDPALADRIFKKVSQQSFKFPDDVESRRY	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0018	cloud	direct	high	813	1.0	GCA_009932775.1_00596
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	555209	555412	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_575	204	1	0.397	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	575	19	11556	11759	MGKEELLKHYRHSLEVYQERLADSEEDKFYMKVHGYRNASYRKELLVKKINEIKKIIKELEDGLRTS	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0019	cloud	direct	high	204	1.0	GCA_009932775.1_00597
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	555393	555677	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_576	285	1	0.418	11	AGGAG	GENOMAD.067882.VV	5.307e-31	117	0	0	1	1246	Caudoviricetes	NA	NA	PF11753	Protein of unknwon function (DUF3310)	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	576	20	11740	12024	MVLEQAERESKRNLGISLSMPDSVNRPSHYQGKFGLEAIDVVRNFAGDLTAVQGFYWGNAMKYLLRFQKKNGLEDLKKARKNLDWLIDEMEGKK	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0020	cloud	direct	high	285	1.0	GCA_009932775.1_00598
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	555674	555775	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_577	102	1	0.294	11	GGAGG	GENOMAD.069695.VV	1.898e-06	43	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	577	21	12021	12122	MIEFLKTVGFNLLLFFLGFLIGERTNRKDKSDD	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0021	cloud	direct	high	102	1.0	GCA_009932775.1_00599
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	555768	556166	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_578	399	1	0.454	11	AGGA	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	578	22	12115	12513	MINNVTLVGRMTRDAELRHTPSNQPVATFNLAVNRNFKNSDGEREADFINCVIWGTKAENLANWTKKGVLIGITGRIQTRSYDNQQGQRVYVTEVVAENFQILEKRDNSANNDSLYNQAPNVPDVSDDDLPF	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0022	cloud	direct	high	399	1.0	GCA_009932775.1_00600
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	556173	556388	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_579	216	1	0.380	11	GGA/GAG/AGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	579	23	12520	12735	MKTMSNITTEEKCCNFFIDELKSCYREMEQYEKKIEQLENQKMDGSCRRASEKNLARYARAGVSTEADKEI	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0023	cloud	direct	high	216	1.0	GCA_009932775.1_00601
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	556392	556724	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_580	333	1	0.408	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	580	24	12739	13071	MKLRLKELRKARGISASQLGRAVGIPGNTIFVYERKGIPIFEKTKKIADYFDVNPAYLVGWIDDSGKPEKVIETVEKVVTVPSRIPPYYQQDENGNHINWRQSVRLVPKQ	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0024	cloud	direct	high	333	1.0	GCA_009932775.1_00602
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	556743	557198	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_581	456	1	0.393	11	AGGAG	GENOMAD.111673.VV	3.532e-28	112	0	0	0	1246	Caudoviricetes	NA	NA	PF05263;TIGR01637	phage transcriptional regulator, ArpU family	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	581	25	13090	13545	MEYSPQGIPLLPNIDEKETIERAKAKLEEYPRWRTISCESMEQKVTQTFTFEPRGGGGPSKQVEKLGIRRADATTEMEEIEQAISRIFEIDYRCILSNRYIRHPKMFHDDIAKLLHVENTKYFELLKMALLAFAEQYRNAALVVEKNVVKA	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0025	cloud	direct	high	456	1.0	GCA_009932775.1_00603
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	557305	557871	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_582	567	1	0.388	11	GGAGG	GENOMAD.027124.VV	1.18e-57	199	0	0	0	1246	Caudoviricetes	NA	NA	PF07104	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	582	26	13652	14218	MRKVEPIRDLDDLERMKDFLKSKSERNYILFMFGIYSGLRVSDIIPLQVKDVISDRIEVKEMKTGKIRRFPINPELRKAINQYIKGKQLQSYDYLFPSRKKVRIDGARIKHISRVAVYQFLKEAGNHIGLTNIGTHSMRKTFGYHHYKKNKNVAILMQIFNHSSADITLGYIGFSQDELDETMLAFSY	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0026	cloud	direct	high	567	1.0	GCA_009932775.1_00604
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	558459	559724	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_583	1266	1	0.477	11	AGGA/GGAG/GAGG	GENOMAD.076853.VV	5.294e-52	193	0	0	1	1246	Caudoviricetes	NA	NA	PF09355	Phage protein Gp19/Gp15/Gp42	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	583	27	14806	16071	MDLKGIPYLRSKLASVRNRVDMRYKQYAMQYHDNMIGITIPANIREQYRAVLGWAAKGVDSLADRLVFREFENDDFQVNEIFQANNPDVFFDSAILSALIGSCAFVYISKGDGDTPRLQVIEASNATGVIDPITGLLTEGYAVLKRDEYESPVLEAYFTPTETWYFPKTGKEFVIPNPAGVPLLVPIIHRPDAVRPFGRSRITRAGMYYQRYAKRTLERADVTAEFYSFPQKYVLGLSQDAEPMDSWKATVSSMLQFTKDDDGEKPAVGQFTTSNMSPFTEQLRLAAAGFAGEMGLTLDDLGFVSDNPSSVEAIRASHENLRLAGRKAQRSLGSGLLNVAYVAACLRDEWTYLRSQFVNTTAKWEPLFEADANTLTMIGDGAIKLNQAVPGYLDADIIRDLTGIKGSDKPAPVQEAGDGDG	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0027	shell	direct	high	1266	1.0	GCA_009932775.1_00605
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	559711	560490	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_584	780	1	0.406	11	GGAG/GAGG	GENOMAD.003531.VV	2.585e-100	326	0	0	0	1246	Caudoviricetes	NA	NA	COG5412	Phage-related protein	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	584	28	16058	16837	MVMVKDIVPELLAEIRDEFDKGVLDSSVLEALLAKLAKGKANYLDANDYAVELGEILSKALRGSVTASKLPDGKMYYNIAKRLLEDVLEVNYDKISEYSGRVQEILNTEAKIRVTVQRPNLNQDRIDGIINRLDSEPDFDSVSWILGDPVVNFSQSIVDDFIRANAEFNFKSGLHPKITRTIVGKPCKWCKSLAGSYDYPDVPDDVYKRHSNCRCTVDYHPGSGRRQNVHSKKWSAEKKAATEKRKLIGLKESKKPIRV	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0028	cloud	direct	high	780	1.0	GCA_009932775.1_00606
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	560626	562041	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_585	1416	1	0.463	11	AGGA	GENOMAD.003419.VV	1.482e-238	737	0	0	1	1246	Caudoviricetes	NA	NA	PF20441;PF03354;COG4626;TIGR01547;K17677	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	585	29	16973	18388	MARKKKLGNQNPTQSVILKYVKKNSKANEAIELYERTGLSCYAWQKNLLLPLMAVDKNGLWIHQKFGYSIPRRNGKSEILYMSEIWALHQGLNILHTAHRISTSHASFEKVKRYLEKMGYVDGEDFNSIRAKGQERIELYSTGGVVQFRTRTSNGGLGEGFDLLIIDEAQEYTTEQESALKYTVTDSDNPMTIMCGTPPTPVSSGTVFTKYRETCLFGKGKYSGWAEWSVSEEKEIDDVEAWYNSNPSMGYHLNERKIEAELGADKLDHNVQRLGFWPTYNQKSAISETEWNELKVEELPNFEGKLFAGIKYGQDGTNVAMSIAVRTKDGRFFVETVDCQSVRNGNDWIVAFLRQADVAQIVVDGANGQRILDDELKDYKIKNVVLPTVKEIITANSLWEQGVFQKTICHAGQPSLSKVATNCDKRNIGSNGGFGYRSHFDDMDISLMDSALLAHWACATTKPKKKQKISY	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0029	cloud	direct	high	1416	1.0	GCA_009932775.1_00607
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	562117	562584	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_586	468	1	0.436	11	AGGAG	GENOMAD.018357.VV	7.693e-30	117	0	0	0	1246	Caudoviricetes	NA	NA	PF14265	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	586	30	18464	18931	MRMSEFTPITTQEEFDAAIKARLAREKEKFGDYDQLKSRVEELEKEKAGLQSALESSKQSAAEYDKKIAEFESRVAGYETADLRTRIALQNGLPYDLADRLQGTDEESLRADAERLAGFLKPSTKPAPFKETDPVLEKTENTLYKNLIQGLDIEE	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0030	cloud	direct	moderate	462	0.987	GCA_009932775.1_00608
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	562597	563493	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_587	897	1	0.401	11	AGGAG	GENOMAD.013457.VV	7.965e-88	292	0	0	1	1246	Caudoviricetes	NA	NA	PF05065;TIGR01554;COG4653	Phage capsid family	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	587	31	18944	19840	MADQLSKGTLFDPKLVTDLINKVKGHSSLAKLSNQKAIPFNGLREFTFSLDSDVDIVAENGKKTHGGASLEPVTIVPIKIEYGARVSDEFVYASEEAKIDILKSFNEGFANKVARGIDIMAFHGVNPRTKQESAVIGDNCFDKAVTQTVNFTTSDPDTNVEDAVKMIQGADNIVSGMAIDTTFSSALASMKNSANERLYPELAWGANTGAINGLPVDVNTTVGLNVGTNKDVAIIGDFANMVKWGYAKQIPLEVIRYGDPDNSGKDLKGYNQVYLRAEIYLGWGILDKNSFARVVKAG	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0031	cloud	direct	high	897	1.0	GCA_009932775.1_00609
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	563497	563715	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_588	219	1	0.379	11	None	GENOMAD.069443.VV	1.756e-39	140	0	0	1	1246	Caudoviricetes	NA	NA	PF09124	T4 recombination endonuclease VII, dimerisation	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	588	32	19844	20062	MEYINVKTGTTIVTENAISGGDWVPIAEYKPLDSLTNAALKEILDEKGITYDNRATKPELISLLEQDNTEVQ	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0032	cloud	direct	high	219	1.0	GCA_009932775.1_00610
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	563736	564131	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_589	396	1	0.470	11	GGAGG	GENOMAD.076853.VV	3.329e-61	206	0	0	1	1246	Caudoviricetes	NA	NA	PF09355	Phage protein Gp19/Gp15/Gp42	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	589	33	20083	20478	MTNFATVGDLESLWRSLKFDESNRAEALLGVVSDSLRVEAKKVGKDLDKMVQESPSYANVVKSVTVDVVARTLMTSTDHEPMTQMTESALGYSFSGSYLVPGGGLFIKDSELKRLGLKKQRYGVIELYGQN	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0033	cloud	direct	high	396	1.0	GCA_009932775.1_00611
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	564118	564456	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_590	339	1	0.448	11	GGA/GAG/AGG	GENOMAD.018809.VV	4.921e-56	190	0	0	1	1246	Caudoviricetes	NA	NA	PF10665	Minor capsid protein	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	590	34	20465	20803	MGRIKGITVTLIDKVKTGQDDFGHSTFEESEVQVENVLVTPTTTDDIVNQMSLTAKKAVYTLAIPKGDTHNWEDKEVRFFNQRWRTFGIPIEGIESLIPLDWNKKVMVERYE	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0034	cloud	direct	high	339	1.0	GCA_009932775.1_00612
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	564449	564685	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_591	237	1	0.473	11	GGA/GAG/AGG	GENOMAD.017784.VV	3.597e-35	128	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	591	35	20796	21032	MSNVSFKLDRKGVSELMKSGAMQSILREKAAGIKGRCGAGYEQDIHVGRNRANAMVYAKSNKAKRDNSKNNTLLKAVR	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0035	cloud	direct	high	237	1.0	GCA_009932775.1_00613
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	564686	565021	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_592	336	1	0.429	11	AGxAGG/AGGxGG	GENOMAD.019860.VV	9.466e-41	146	0	0	1	1246	Caudoviricetes	NA	NA	PF16807	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	592	36	21033	21368	MIEIIIKKYLDGRLGVPSFFEHESKMPSSFIMIEKTGNAERNHSGTATFAFQSYAPSMQKAAELNGKVKEAVKGLVELDSISGVHLNSDYNFTDTETKRYRYQAVFDINYF	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0036	cloud	direct	high	336	1.0	GCA_009932775.1_00614
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	565033	565602	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_593	570	1	0.460	11	AGGAG	GENOMAD.073691.VV	3.048e-47	169	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	593	37	21380	21949	MATSSNVTTAKPKVGGAIYSAPLGSTLPTDATSDLDAAFKSLGYISEDGMTNTNSPESEDIKAWGGDVVNSSQTEKKDTFGYTLIEALNVDVLKEIYGKDNVSGDLSTGIVVKANSKELQDHCLVAEIILKGGIMKRIVIPQGKVTEIGEVSYKDGETVGYETTVTAFPDKQGNTHYEYIKAPTAVPGG	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0037	cloud	direct	high	570	1.0	GCA_009932775.1_00615
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	565605	565877	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_594	273	1	0.425	11	AGGAG	GENOMAD.021224.VV	2.046e-23	95	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	594	38	21952	22224	MSKDKTIKGTTSTGFDFEISQDRLNNYELVEAIAEVDTNPLVLPRLLNLMLGPQAQNLKDHVRTDEGLVPMEALMSEVEEIFANQKPVKN	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0038	cloud	direct	high	273	1.0	GCA_009932775.1_00616
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	565892	566269	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_595	378	1	0.452	11	None	GENOMAD.024158.VV	8.112e-41	147	0	0	0	1246	Caudoviricetes	NA	NA	PF17318	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	595	39	22239	22616	MIKTDEEALICDLAETYRIYDYRQLPAYQAAVFSVGLREDSRIKQAMSGNQASFDTLLAAAMLDRLTTLVWFKTSDGQKGRNRPESIAAKLTGVVEQERMEMVFDSGEEFEKMKQEIIGKNGGES	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0039	cloud	direct	high	378	1.0	GCA_009932775.1_00617
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	566269	569226	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_596	2958	1	0.443	11	GGAGG	GENOMAD.136983.VP	7.705e-152	509	0	0	0	1246	Caudoviricetes	NA	NA	COG5412	Phage-related protein	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	596	40	22616	25573	MATELGQAYVQIMPSAKGISGMIKNAIAPEASAAGQSAGMTIGSSIASIATKVIAAAGIGKAFSAAISEGANLQQSLGGIDTLFKDSAEKVKGYANEAFRTAGLSANAYMENVTGFSASLLQSLGGDTAKAADVANMAMIDMSDNANKMGTSMDRIQDAYQGFAKQNYTMLDNLKLGYGGTKTEMERLLADAEKLTGVKYDINNLADVYQAIHAIQGQLDITGTTAKEASSTFSGSFAAMKASAQNVLGKLALGENVLPALQALLDTTSTFLFNNFIPMISNVFSGLGLLLTEGLSKVASQLFGEAFGSAVYSQLSKVSGVFQTFFDMLFGSLNKQDNIDILEALGFSKDTASQIVNIADNIRGAFENIGAIIGNVSEIVGGFVSDLLGIGGSEQGVSALGTAFEVLSGGIKFVSGILKSFTDFIKKNEFAVSYLKSVLTGLLTAFLAFKAVSAFTTAITVAKGAVIAFNAAIVANPIGAIVAAIAGVVAALTWFFTQTKTGQKIWAGFVSWIKDAWQGISDFFSGLWSGISDGAKKIWSGVQAVWAAHVEAVKAIWNGVTEFFSNLWNGIKSAFTSAWTAITQAVMTIVQPFIDVFISLWNNVKDGLSKMWDGVKMVFQGAWEFIKSIVMGAALIIIDLLTGNFSKLGEDMGLIWDSIKNAISMVWEGLKLYFSGVVDAIVGYVKTVFETLVSALQAVWDSITSAASAAWEWLKTTITNIITGFISGAIAAWEGFKNALSSLWNGLKATAEASWNALKTAVVNVINGLVQGAQKAWDDLKNGVSNAVSSVTKVFDGLKKINLFEAGKAIIDGFLKGLKGAFDNVKNFVGGIADWIRENKGPIEYDRKLLIPHGRAIMDSLNEGLQDRFKDTKSLVSGMAGEMSDIFEQTTLTGNVALTGSDGIQDSIVRGSYQLDTLASSEFEKLSKKVDELSERALDIAEKALERPVQMVLDDNTLVAKTGSKFMNWQSEQEEMMNRMRGVII	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0040	cloud	direct	high	2958	1.0	GCA_009932775.1_00618
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	569223	570722	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_597	1500	1	0.456	11	AGGAG	GENOMAD.014242.VV	3.816e-158	506	0	0	1	1246	Caudoviricetes	NA	NA	PF05709;COG4722;TIGR01633	Phage tail protein	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	597	41	25570	27069	MTEEMTFNGVGMSRFFRVREVVRAIGNDRNISQVDAPLIGTNIQKVSFGAKKITVSFTMLEKTATEIEVLKHELAGVLHVKEPARLTFEDEPDKYYMAIPTGDVSIGNINRACQKGEITFLVPDGVAHSVTYKRVVDYEERQGKMVFAIDNKGTADAYPIITFKANDENGYYGLVSERFAFEAGSIEEADIVPYKHSEILWDYVSDNGIIKGLADGQKNVAILNDNSQNLNGTLAIQSAWGRPHLFLANPGSGPLGNHAGSVTWEIPADSVGEKGALHEYIWWRQIFWVNPANQYGFIKISFTGENGEFLYGVETIKRGNGLNTEYNFLAANGSGSYKLVKQWTFWPTHNPNENPFNKDSGQSDILRRDEEVQLFWNGSYQKFTIPEIKGKKSIKVHVAMGAFGDKPIPTRMYLDSIVYRKDFVNGTKDIPNRYAAGSTLIINSENDSVFLNNLPNLDQVVDGSLWPVIPPGKSEIEILQSSWAKKKPTVSIEFEERWL	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0041	cloud	direct	high	1500	1.0	GCA_009932775.1_00619
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	570722	574009	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_598	3288	1	0.464	11	AGxAGG/AGGxGG	GENOMAD.003908.VV	2.628e-86	314	0	0	0	1246	Caudoviricetes	NA	NA	PF05895;PF07104;COG4926	Siphovirus protein of unknown function (DUF859)	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	598	42	27069	30356	MLLTIHDSALKKVAFIDNDKQTTLNFFNDKWTRSLENATSIFQFSVFKRKIKSDTYAEQAYKHLNERAFVSFKYKGRSYLFNVMKTEEDEHIISCNCENLSLELLLEYQEAYKAPKAMRFSEYLDTWGILGVAKLDLGINEVADQQKSLQWEGQETSLARLISLAHNFDAEIEFETKLKSNSQLDRFIINVYKAHSETNQGVGRRRNDVVLKYGKNIKSIKRKVDKTKLYNAIKPVGKKEVSTTTTDKISNPTARTAANSGKKYSGGGLNYAGHPMSAAIVQTILNLCVQYNILPSGMICQLYLESFWGASNVARIDNNWSGMSGSAQTRPSGVKVTTGSARPANEGGTYFHYASVDDFMKDYAYLLAEQTSGGRKFYGVKGKQNIEDYTRGLFRVGGALYDYAAAGYGHYIALMRDIRGGVNRSNGNVLDKLDDLWRQPANQVSQPSQPITQIVKADKTIAVINEMKGLQGRTVGNGQCYGLAAWYSMKLGGPGLGAGVTGFSGRVGAGMAAAYIGTDYAWANFGWSVVRPRGTNELKAGSLANIKAHNAFQGTGQYGHVSIIIANNGSTVTVLEQNYAGRQYVTLGTYNAQAYLGAIETLCYPPELKAGRTVEGTSVTTTGTAPEVSLKEIEYKQTETKQVALSIDPKKKKEWKNAKGEVEFYLKDSLLFAPLSKQLYPSVLSGTETSDNWIRKDMEVDTDSEEVLISTALRNLRKYCYPAITYEADGYFDLDIGDTVKIQDTGFSPMLVLEARVSEQQISFTNPSENKTVFANFQALQNKVSDSLLTRMAKLAEQAIPYELKLSTDQGTAFKNRTGQSLLMATLEKNGKVYEPIIFYKKGDSIIGSGSQMLVHATDFEGTLQVTVEAYLNDEKVATTEVTFSNVADGQTGAKGDKGDPGAQGPPGPKGDKGALDEEQLKQVNDKIDSKADNKLTAEQLNALTESMQLAKAELEAKASIDTVNEWVKSYQDYVKADEAGRAAAEAKLVAATQRVAKIENNLGDMAERWSFLDSYMSASNEGLIIGKKDGSSSVRVESDRISFYSAGSEVAYISQGVLKIENGVFTRTLQIGRFREEQYQLNPDMNVIRYVGGI	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0042	cloud	direct	high	3288	1.0	GCA_009932775.1_00620
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	574012	575997	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_599	1986	1	0.463	11	GGAGG	GENOMAD.147920.VP	1.092e-94	328	0	0	0	1246	Caudoviricetes	NA	NA	PF05895	Siphovirus protein of unknown function (DUF859)	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	599	43	30359	32344	MVRANFSGAYGHNLQLEVISEGYRQDIAGNFSVINVQVKLVSNGYAAIYDGANKSLAITVGGETRNITADATIGQNQNKLIFDNEFRVPHDQNGTKTVNINARLDINVSGYGSSSVGFNRRLPDIPRASSGNDVTAVIGQPVTININRKNDAFKHAIWATYGSFNKQITTANVDTSFSWTPPLELCEQTPNSASGFGNITIITYDGNREIGRDVKRLNLSIPDSVKPTLTGFTLTDGNAIAANIVSGGEHFIKILSDIRVNFGSASGVYGSTITGYYAEIVGKNQSTTTNGGGLGLMNYDGQVVIRARVTDSRGRTSNAIERTVTILDYFPPILKFDVARTGLNGGTLTITRTAKVTPLIVNGSQKNKMTLTFKVKPLADKNYTSDTGPAAGSWTSIAELVNSPANLSGQYPANKTWEVVGKLEDRYTSTEFAAIVTTEGVVISYSQFGAGINKIWERGALDVKGDIYVNDKLIQMHQLTQKNGTAIYAYGKDFDHERTTGVYFKNGTENNNPARQYGWLLVLNSNNECFQMFFPSIATAEPAKRVLLAGKWSAWSTNARSDHANLKRIEWTSTGAAGVHYKRQGDIVSLRIEIKDVTGNVSLGRIPNELTPIQGNAAMLNVPVFEGGSSNDRHLQINPDGGMTLLASNDKYIGTQINWSI	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0043	cloud	direct	high	1986	1.0	GCA_009932775.1_00621
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	576016	576603	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_600	588	1	0.435	11	AGGA	GENOMAD.034977.VV	8.47e-38	142	0	0	0	1246	Caudoviricetes	NA	NA	PF07104	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	600	44	32363	32950	MSKLQFNRKSWIYSSSNNEVEGTHVILTNAEGAFYPVLLPKEAIDLPVEELEKKALEVVYQENFPDRAKKEQDEEINKKFQEADKKEQEATLQRAELKELLELVTYIALGISGGLDINSYTALAQKIDAPVNGKRYTGPTFVTIDYPYTTNPKWQKGNRTIVKYTGMTGYNYTGQSAEDMLKSGAWTIVLPNISN	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0044	cloud	direct	high	588	1.0	GCA_009932775.1_00622
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	576624	577265	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_601	642	1	0.379	11	AGGA	GENOMAD.194901.VP	1.269e-06	51	0	0	0	1246	Caudoviricetes	NA	NA	PF14386	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	601	45	32971	33612	MSHWERTINGYNLDKFDTFETDGQYDMPILKAIDIKPTSLIGFNYVCSSKKRDGAVHFFLDDYQFERVWNRPELYLDKFREFEAIIAPDFSLYLDMPVAMQIWNCYRARLLAQWYQSQGVNVIPNITFSDKMSYDWCFDGMPKGSTLAISSVGTAKRPDARELFKNGLFEAVRRLNPKRLLFWGKIPEFDFGDLEVIGYTDKRIERMRKEHGR	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0045	cloud	direct	high	642	1.0	GCA_009932775.1_00623
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	577255	577653	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_602	399	1	0.363	11	GGAG/GAGG	GENOMAD.222375.VP	1.026e-49	173	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	602	46	33602	34000	MGGRGAMLGDKKRTKVMSLDEFLGPKGLASPISGWLDDKWRGNKNFSSGNQREKFTKEARKNIDEYHQKRNAAIKEYKKLVASGKIREPTSLEKSLKTAQGHSDNKAVQAARRMLEKRGYDWKTGKKIKKSN	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0046	cloud	direct	high	399	1.0	GCA_009932775.1_00624
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	577676	577957	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_603	282	1	0.440	11	AGxAGG/AGGxGG	GENOMAD.039653.VV	3.402e-12	63	0	0	0	1246	Caudoviricetes	NA	NA	PF24073	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	603	47	34023	34304	MKPEYQLLMTVGGFIITVYGFYNVLRAKSIEQATKINSLELRLGFLEQQTKDHTRRLDDHDKQNQALVAMTEQIKNLTEDVKELKIMIEKKGS	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0047	cloud	direct	high	282	1.0	GCA_009932775.1_00625
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	577961	578245	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_604	285	1	0.400	11	AGGA	GENOMAD.040793.VV	4.783e-32	120	0	0	1	1246	Caudoviricetes	NA	NA	PF04531;COG5546;TIGR01598	Bacteriophage holin	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	604	48	34308	34592	MNKINWKVRFNSKNRQFYLRLILALALPVLAYFGIKFEDLTSWNAVGSLLVKFINNPYLVGLTIVNILNIIPDPTTKGFGDSADALNYTEPKQD	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0048	cloud	direct	high	285	1.0	GCA_009932775.1_00626
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	578261	578965	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_605	705	1	0.441	11	AGxAGG/AGGxGG	GENOMAD.133734.VP	3.956e-56	197	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	605	49	34608	35312	MTTQKQLLDKLENVVNQRMEVPTNPYGGQCVALIDNILQYQGLYKLNFSYVNAIDCLDRAASLGLKVTRFNGSNNPPVGAVFVSNCLPYHEFGHIGFVVAHNPDGTITTIEQNIDSNADALYNGGWTRKVVRNLSSDGTFSYVNWQAPAQQMLGWFELPFDAPKADIVIKNLEDLKLMKEFIVTNKKYGYGVFVGGKYVGLSDIKSVNSMKDRLGFAIVDLGDDDFLRFSKAHG	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0049	cloud	direct	high	705	1.0	GCA_009932775.1_00627
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	579249	579965	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_606	717	1	0.403	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	606	50	35596	36312	MAYYFIGGLGCNVYYPQDFLTALELPIVYLDLYCQEIRQEADLEEWFALQVDLTQEMTLIAHSLGADFAVYLASVFPSVKKLILLDGGYLNLDKICNLEEEIADALAYLEKTSYRSIEEAVSLERDEAKHWSENCSKAVKANLVFNKKAQVWKLGISQQIVKNLLTLRRLMYGRLSKLSDRQIHLFIPQKTESDPSWKVQALQGLPAYVQLAEVKDCGHNIYGDNPLGLAKMVRSVLD	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0050	shell	direct	high	717	1.0	GCA_009932775.1_00628
GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	genomad	CDS	580109	580636	GCA_009932775.1	APLR01000001.1	GCA_009932775.1|APLR01000001.1	GCA_009932775.1_APLR01000001.1	GCA_009932775.1|APLR01000001.1|provirus_543654_580636_607	528	-1	0.384	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad	GCA_009932775.1|APLR01000001.1	607	51	36456	36983	MKKTFQAFLLAASLLSLAACVQSQSKKPAQSSDKAKTSKKSSSSSKVSSKSSSKSDSSSSSSSSSDSSSIPSTNSSSSSTIVDGKEVSITSEGAFITFPEIGKVVKKDDGYLFASQGLWVMIRTDGQYMSITSEGRNINNIDVDPSPVNDVYAKFGVSGTADIDAIIEKAKSSNN	GCA_009932775.1|APLR01000001.1|provirus_543654_580636	GCA_009932775.1|APLR01000001.1@region_543654_580636@tool_genomad_CDS_0051	shell	direct	high	528	1.0	GCA_009932775.1_00629