core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	507	611	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	508	612	GCA_011714705_1_6_1	GCA_011714705_1_6_1	+	42017	.	.	hypothetical protein	MKVNLKVRKTTKREKVEFIIGLLLLLFAVWYFTR*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	615	803	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	616	804	GCA_011714705_1_6_2	GCA_011714705_1_6_2	+	42017	.	.	hypothetical protein	MSVDIEAIRWLLDNATAYAISKNCGMSIQAVDKYKNGVSDIMNMRLKHAISMITYAQELKKQ*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0002	persistent	direct	high	188	0.995	GCA_011714705.1_00210
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	990	1421	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	991	1422	GCA_011714705_1_6_3	GCA_011714705_1_6_3	-	42017	.	COG5346	Uncharacterized membrane protein [Function unknown]. 	MDTENKDLIEVNNIVDEVERLPHEQRQVVLQKLEIYQGDLPHPDILKGYKELYPDAAQKIIDNGIAESQHRREMEDKYLSGNIASHKLGQLFGFLIALVVIIGGIYLIATDKQIAGSVLTGTTALGLIGLFTGNNQNKNKDKE*	mmseqs_cdd	nonviral_gene	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0003	persistent	direct	high	431	0.998	GCA_011714705.1_00211
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	1405	1611	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	1406	1612	GCA_011714705_1_6_4	GCA_011714705_1_6_4	-	42017	.	.	hypothetical protein	MLKNTKQPQYFKSFLLGMTAIVLPVFSFNQNISKVKADTVPDWKKVKSDYKKSTMGIQKEVMKFGYRE*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0004	persistent	direct	high	206	0.995	GCA_011714705.1_00212
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	1788	2744	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	1789	2745	GCA_011714705_1_6_5	GCA_011714705_1_6_5	-	42017	.	COG5263	Glucan-binding domain (YG repeat)  [Carbohydrate transport and metabolism]. 	MDIDTSRLRTGLPQVGYAPYRQVHAHSTGNRNSTAQNEADYHYRKNPELGFFSHVVGNGRVLQVGPVNNGAWDVGGDWNAESYAAVELIESHSTKEEFMTDYRLYIELLRNLADEAGLPKTLDTSSLEGIKTHEYCTNNQPDNHSDHVDPYPYLAKWGISREQFKQDIESGLTIETGWKKNDTGYWYVHSDGSYPKDKFEKVNGTWYYFDGSGYMLANRWKKHTDGNWYWFDNSGEMATGWKKIAEKWYYFDTEGAMKTGWVKYKDTWYYLDGKEGAMVSNAFIQSADGTGWYYLKPDGTMADKPEFEIEPNGLITTK*	mmseqs_cdd	nonviral_gene	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0005	persistent	direct	high	956	0.999	GCA_011714705.1_00213
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	2744	3079	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	2745	3080	GCA_011714705_1_6_6	GCA_011714705_1_6_6	-	42017	.	PFAM:PF09682.9	Phage-holin	MTQFNEFIIAFATGFLAVAVGSIVKIVKDYLLRKGGEKAVIIAEILAKNAVNAVEQVAAETGYKGDEKLEQARDKVRAELTKYNISMTNKDLDTFVESAVKQMNDAWKGQE*	common_virus_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0006	persistent	direct	high	335	0.997	GCA_011714705.1_00214
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	3094	3411	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	3095	3412	GCA_011714705_1_6_7	GCA_011714705_1_6_7	-	42017	.	.	hypothetical protein	MRDRVRIMLGSREIVKRYIGDRLVWSSGPSLLLEVLNTRMWQYWGGYNIDIKGNDIKVAAIRYVQLNNSRLIRIQADMYNRGVIYLTGTNLREYIGSVNVKFYRE*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0007	shell	direct	high	317	0.997	GCA_011714705.1_00215
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	3420	4211	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	3421	4212	GCA_011714705_1_6_8	GCA_011714705_1_6_8	-	42017	.	6V8I_BM	Distal Tail Protein, gp58, Tail-Associated	MSAMSNLENLARAIGEDVKAIKEDSELKDREVKKRLDTLESRPKVHPETLVTKAELEEKGYLTSHQDLSTYAQKWELYNDIPIKARISALENRPSFDTLTPTQRDSLKGDNGHSLNASVRIEGSYKNGSTSRLNLFADVFYDGEAVTSGYTLDYYYRGFGYTNWRSLRNQTPDSAGKFGTWSASQRSGGWFEVRIEVNYRGLRASAFTHLDNVNDGEQGRSGVPGQNIVNQNGSQALNYWAGTQEQYDAITTKDPHTIYDIFK*	hhsuite_tools	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0008	persistent	direct	high	791	0.999	GCA_011714705.1_00216
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	4208	4528	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	4209	4529	GCA_011714705_1_6_9	GCA_011714705_1_6_9	-	42017	.	PFAM:PF12789.6	tail-fiber-protein	MDTTKLTAFAQAVGEDNKKVNEELKTKVSTSDMNQAIAQAKSEVKAEILGEGTPENLDTLKEIAEKITSMGQDENSALLGKVTEVSGRVDQIANLDLVATYNAAKA*	phrogs_hmm	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0009	persistent	direct	high	320	0.997	GCA_011714705.1_00217
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	4535	5011	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	4536	5012	GCA_011714705_1_6_10	GCA_011714705_1_6_10	-	42017	.	PFAM:PF14606.5	neck-protein	MVCNLNMTNLRQIDGGHLIKQGDLASTFGFALLDEDYQVISSLEGKEALISLTKEGYQWKKQVTVTGQGVSFHLDAILPIGSYRLEITAGGYVFPSDKSVHIKIVASDKELVTEEVHALKELDIAKEVEKQLAGRTVGESPVGQELPDLLFYYNLGKV*	phrogs_hmm	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0010	persistent	direct	high	476	0.998	GCA_011714705.1_00218
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	5027	5305	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	5028	5306	GCA_011714705_1_6_11	GCA_011714705_1_6_11	-	42017	.	PFAM:PF04531.12	holin	MTEIEHLLIRFLFSLIPVVVLYFSMKDRATKQENRMTAIEKDIENLREFRMSANKRLDNHDEQNKAILVLAEQVKSLGEDVRELKTLIQSKQ*	phrogs_hmm	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0011	persistent	direct	high	278	0.996	GCA_011714705.1_00219
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	5316	5468	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	5317	5469	GCA_011714705_1_6_12	GCA_011714705_1_6_12	-	42017	.	.	hypothetical protein	MSKITLDQAKIDMYINLLERGAVDFSWVHKRWKDRVRKELKRRGLSHLAN*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0012	persistent	direct	high	152	0.993	GCA_011714705.1_00220
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	5461	5994	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	5462	5995	GCA_011714705_1_6_13	GCA_011714705_1_6_13	-	42017	.	PF07104.11	Protein of unknown function (DUF1366)	MNYEVAINPYLKGGENVTVVAIKMENKGRYSYEQCELPGDHTQDSEDALIQAVLELVRTELDPTSAIVKNQEQLAKTTEALERANQLMDGMQKVNLQNAQDIEDILARLEELEAQGESDQEEKEEDTPQVTDTEKQTEEAQPTPAVEDKKESEKEDDISETTNQESPSEDNGGSSNE*	hhsuite_tools	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0013	persistent	direct	high	533	0.998	GCA_011714705.1_00221
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	5991	6197	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	5992	6198	GCA_011714705_1_6_14	GCA_011714705_1_6_14	-	42017	.	.	hypothetical protein	MDNHTIDKLVAESLVDRLADIELNYAHLNVHHRLALAELQAFKAVLEYDPALKELFDETQAKMKGNKE*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0014	shell	direct	high	206	0.995	GCA_011714705.1_00222
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	6190	10806	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	6191	10807	GCA_011714705_1_6_15	GCA_011714705_1_6_15	-	42017	.	PDB:3GUD_A	Neck-appendage-protein	MIYLTEGNRPLNEAYNDEIVQERNNTYQLTFRFPTSDPKWELLKEETFLTADDLHGEQDFYIFEVEKQQGYIQVYANQVISLLNNYIVSSIEVDRVSGTRVLSAFAGSITRANPFSFFSDIDDRHTLNIKDKNAMEVLAKDKHSILGQWGGDMVRNGYNLRLLKNGGSENESLFMYKKNLSSYQHKTSTKSLKTRITFKTTVKGEGENAVDHDYMVVIDSPLLGNYSQIYEDVVEVNDQDVTDEASLIAYGKQYFRTSMCDMLEDNLEISVVGQSDVAVQMFDVVSIYHEWYGLDVRKKITKYTYSPMAKRLKSIGFGTFQSSLANAIGGIVNDAVLNESRNLHQIFEERLKKEIANADRAFDAEFTKREKAITDAIELAKAKAEEVKQEVSDTINQRFNSFHDEPLRESRRKAEEALKQAGASSSLAQEAKRIGLDSVARLEAFKSQTRSAQTALSGDLNLLKQTVTNDISSKQRQLKTDISKQVQALGQIKNDLAGVRSSQARYEETTKGRLTALTNRMEGKANKSEVRQTAETLTSQIDRIQEESSTRISTMTSRFNQRADALDAGVRRLTEGLRTKADISSLNVTAENIRQSVRRLERDTQSQLNQKLSTAEFEVRAGSIRQEILNATKDKADKTLVVAEAGKLREEFSNMQVGGRNYYRDSEKIQQSRFGFVFDNLDPYLSKSDIGTTWTLSFDCKLDEVDGSFPFHMSHGGANGFGIEGKKEFTATREWQRFRLTGPVFFKEDAPSESKLQMTLFNSDLGYGGPLFIRRIKLEKGTLATDWSPALEDTNGLITQAKASFERTAQELRTDLSAVQAYVAQDGQRQESLQRYTREESARQARAVREQISRDYVGKSSYQEDVEGIHRRIEGVKTSANREITSQIASYRQSADGTFRDISSQITTYKQDMTRNIANLSHQLAGKVETTDFQRVRESSQLYERILGNTENGIADKVARMAMTNQLFQVEVGKYSVSGPNLIKNSDFKNATNKWGSTQNLGRLVKHSFYHNGQKDLMRLSNATKNKNFLSSHRFNLERNTDYVLNFRGFNNSALASYDVYILGRRAGESDGFTIFKKVVSSKKLSTSRCEDVSVTFNSGEMDNAYIRFENNGSSSGTADLYITEVDLYKGYKPRTWQPHPEDAVADANKKLEATQTKMTQLAGSWLVQNINSAGDLISGINLGANGHNRFVGKLTHITGETLIDRAVIKSAMVDKLKTANFESGSVTTAVLAAEAVTADKVKFDHAFIRKLIANDAFIGELTSKRIFATKIESVVNRSTFLEAYQGQIGGFTIGRFAQGRGRWISGVNQFSVGMGNGEGGSYNGENTAFWANWGYNWNSPGPNAWYVTTLGNMHCRNGANFHGRVDFSDRSRVNFYSQPSFSNGAVINGSLRVSGRITYSGGEWLYSPIYNKLWKDTSQGGTWLYLNRQGNGGSDWIEMNKRISDRRYKSNIQDSQVSGLDVIEKLKTYSYRKEYDGQIEDISCGIMAQDVQKYAPEAFYENPDGAYSYRTFELVPYLIKAIQELNQKIEKMENRHG*	hallmark_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0015	shell	direct	high	4616	1.0	GCA_011714705.1_00223
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	10803	11501	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	10804	11502	GCA_011714705_1_6_16	GCA_011714705_1_6_16	-	42017	.	PDB:2X8K_A	Distal-Tail-Protein	MFYMIINGFNTSTIPHCVVTDFGQVEAAKPRVVEDANLYGANGSYRVLDGGYESYERTFSFYIPKLLDVSTIVEKFQPKDNVLEFSYQLGSVFYADFIGATHSPHGMHAWKLELKLSMQPFRYQKNVAPLIFTASGNVNNPGSVYSEPVIEIEGDGDISLTIGRTTMHLTIRRKVTIDCRHKKQNIYNADGAVQNTLRKRGGFFELAVGSNGLVFTGAVRKVTVRPNWRYIL*	hallmark_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0016	persistent	direct	high	698	0.999	GCA_011714705.1_00224
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	11501	15676	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	11502	15677	GCA_011714705_1_6_17	GCA_011714705_1_6_17	-	42017	.	PFAM:PF10145.8	minor-tail-protein	MASGTPLGQMYIELGLDVSKFSPTLTGAKNAVKYFQNNVRSLDSTLKGNEKNASLLQAKYKTLGQAIDSQRKVLDEMKKSFDKLDPGTAKFDKAAADIQRENAKLAVMEGQLRGVEKALQDVGRENSWSGKMDAWSEKFAKGGEKLRAMGDAMKPVSAALLAGFTLSTKKAIDFESQMNTTKSLLADTIPTADELNSTTQKLGESSKNWAKQYGISTASINEGMQEIIKKGFDANQTIEAMPAILDAAKASGEDFNTVMNATTNILQQFGLSTQDTERVTNSLTFVANKTAAGFADMGAAMEYVGPVAKNVGMNLEETAAAVGLLSNNGIAGEKAGTALRGALTRLLKPSEQNANAMEKLGFSAEEFRSGAIKLPDILDRIKKNTEGMTDAQKSALIATAFGTEAQTAMNILVDQGGDALRNLANETKGATTYTKDLANELSKSSKNGVERFKSSLEVLQINIGQKLLPLLTPVIDKVNQFIDWLSKAPPAVQSLAVGIGGFLALGYPFLNFLGNGATALSILIKHAGKLEGLLKGGLGLAKLTERAGKLKGLLQGGLGLAKVGSEATVLAEGAGAAASSSSLLSGAIGALTNPIGLLVGGAALLAGGLVYLGHKKDEARIKAEEFGSQLSDTARKELRDFQSKVDDTSTAVANFGTHAGDAEKVSEAFRKLHEEVAAGAEKANQRMEELAKKLGFSDEEIAKMKVKNDQVVSNTDAMANQVSEIYKRHNGDASKFSQEEKEIVLNNQREMIKARIEMMELSGEQQKAALQALNGEIGSLNETQLKHTRDVLKKALDEENQLYKTSKDGLKQLLDAKRIDQETYNKKIQELETNHQQTMEALGTKYYQVMQNLDAKVKARTGQSWNYWEEAKKVLEEYGLSYEVIGQKAAEASQKMGDSHSILAKYTSDMSKETREANDAWSLLVGNIDENNNFVIKSNVKEVIGEATKSAEGWEQLQFIVKDANINSNARVTIAEALVESGKWSTMTLEEKQLIVQNQAGLQAIFDSENHLRIWNSMPAEVKQLLLENTDVMNKAEEASKALYNYDALTPKQKELLATDENFRKAVARSTDTLTTWNATTPFTKDLKLDPTNVLNNGQLSIDKIMAWNLSNPENKSLNAIDNTSEAVASAKASVNSPKQEKPIDLLAKDQTAGVRNETSAAINAIKQHNPVDILAKNSTSSTVSEVKSVVNSIQDKTVTISARDNASGVLAGIRSWITRVTGDFFTNVFASRHAHGTNYHPGGLAMVNDQRNSTYKELVTLPDGRSFIPEGRDVLLPLPKGAKVLRADKTKRLMREMGVPKYAAGVGIPSDAKFLREMEEAQAKIVVQTKGDTNSKDSDKVVSEIAILRASMEKILTAILEKPSDTYLDADKISMSVYQRQGAIYAREGM*	hallmark_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0017	shell	direct	high	4175	1.0	GCA_011714705.1_00225
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	15732	15962	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	15733	15963	GCA_011714705_1_6_18	GCA_011714705_1_6_18	-	42017	.	.	hypothetical protein	MSRKEKARRRYWFWFTIFILYLAFGLYCICTNFVDIFGMLLLSPFIFASLPLYAYLYLGMFIWSFMSLAMDDFYKE*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0018	shell	direct	high	230	0.996	GCA_011714705.1_00226
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	16212	16505	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	16213	16506	GCA_011714705_1_6_19	GCA_011714705_1_6_19	-	42017	.	.	hypothetical protein	MAKVQFTIKNDKGEDVLKTSKEITTRDYRDYLVMNESLTSDLSEVEKLDKQLGFIASLFDDVTVEQLLEYTDFAKVISIFTEIYSHLVGDVDPKEKS*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0019	shell	direct	high	293	0.997	GCA_011714705.1_00228
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	16551	17147	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	16552	17148	GCA_011714705_1_6_20	GCA_011714705_1_6_20	-	42017	.	PFAM:PF04630.11	major-tail-protein	MTVKGTALIGLKSVTICVHDGQTPTVGQNLFTLEGKDNEGATQTARVTGLSSDPVKTYGSNVAYHVSNRGVGDVKVEMGLLDVPLALYTNALGYGDDDGIYYFGADTVAKNVSILIESNTADGEPVYYGFYKGQLSMDAIDFETLKDKANELATTSVNFAATASSDAATKGRYGAIVYGSDAEKLKKLKGQLNMTAAG*	hallmark_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0020	shell	direct	high	596	0.998	GCA_011714705.1_00229
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	17164	17544	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	17165	17545	GCA_011714705_1_6_21	GCA_011714705_1_6_21	-	42017	.	PFAM:PF05657.10	tail-component	MIKDKLTELSNALEEDESLSGISIKSFERPESLGDDETSIVIIPVGPPMQTAHGSNTSLAKTFLYQINVESTNRVECKELQGRIEKIMENQGFYQTEGGLEQWIPDIKRYVDARTYKGMSALYEKY*	hallmark_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0021	shell	direct	high	380	0.997	GCA_011714705.1_00230
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	17544	17942	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	17545	17943	GCA_011714705_1_6_22	GCA_011714705_1_6_22	-	42017	.	PFAM:PF04883.11	tail-component	MSSGADLKGFDDILRNIEARLGEPVVRRKVNRALKETVKEFEPTFKQAMAVYADTGKTVGAVVHGNVTGTASGVPMVKLGFKSPRWTLIHLNEFGYAKNGHPRGFGVMRRFFEASKPVFKSKVGMKLKQEFL*	hallmark_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0022	shell	direct	high	398	0.997	GCA_011714705.1_00231
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	17935	18324	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	17936	18325	GCA_011714705_1_6_23	GCA_011714705_1_6_23	-	42017	.	PDB:2KZ4_A	head-closure-knob	MKRSEGPSYRYKNPEAQNGDLRTPLTFYTSKIKKGVDGRDVSYEKAFYTMGQIYSPSMKDFEIATGKAMKAKMTLKIRDPLTDYQPESRHFVEVGDIRLVGKKWQVIDVRPDFDNRDFLIVLIGGGRDV*	hallmark_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0023	shell	direct	high	389	0.997	GCA_011714705.1_00232
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	18311	18499	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	18312	18500	GCA_011714705_1_6_24	GCA_011714705_1_6_24	-	42017	.	.	hypothetical protein	MIKVLKEFYDLKEGVLRQVGERFEATEERFAEIKERLPDYVELEKSSRSRSSKEVVSVNEEE*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0024	shell	direct	high	188	0.995	GCA_011714705.1_00233
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	18492	18782	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	18493	18783	GCA_011714705_1_6_25	GCA_011714705_1_6_25	-	42017	.	CDD:cd08054	Head-Tail-Connector-Protein	MEIEAKLHSLLDPFKERMRIFHSGEDANLSRMLESSQMVITRLVGSGNIHDHQIRELILERARYVYNDQVEFFYENFKADILALSLDKIEMEDSDD*	hallmark_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0025	shell	direct	high	290	0.997	GCA_011714705.1_00234
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	18796	19911	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	18797	19912	GCA_011714705_1_6_26	GCA_011714705_1_6_26	-	42017	.	PFAM:PF06673.10	Major-Capsid-protein	MMKLGNEFTTARQNFMNAVETGAPMEEQNKLYNEMIEALTDKLQDDAREAARKEIATMNPYDAQLTAEAREFFNNIEKLPPKGIEKLFPQETIDRIFEDMVAARPLLQHIGLRNAGIRLKFLKSSRTGQAVWGKINAEIQGQLKQEFAEEEAIQSKLTAFVVIPKDSEKFGPAWLQSYVSIQITEAFAAALEAGYLNGDGDNKPIGLSRTLTGTAESEKVTYAEKQAQKKPLTFADSATVVKELTEVYKYHSTKADNTTPVAVEGNLVMVVNPADAWDVKKQYTSLNAQGVYVTAMPYNLILVESVAQASGKVTTFVKGRYDAFVGGGIEFGRFTETYALEDLNLYTAKQFAYGKAHDEKTAAVWTLNIGE*	hallmark_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0026	shell	direct	high	1115	0.999	GCA_011714705.1_00235
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	19930	20652	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	19931	20653	GCA_011714705_1_6_27	GCA_011714705_1_6_27	-	42017	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MTIIQIKGAIVSNDDRWFYDWLDMDATAPKDIVLPTTGEDVEVHINSGGGDVYAGSEIYTALRAYQGHVTVKIVGIAASAASVIAMAGDQVEISPTAQIMIHNVSAGVRGDHKALLHEAGVLEGFNKSIAYAYIDKTGKALDDLLDLMEGETWFDARSAVNHGFADKVMFESQEAPVLVASQTPVIPRDFIEKIRSAMTPDVELLADLVRDRLNNSLPIPEDKKKEDKTAEPVGLGRFPF*	common_virus_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0027	shell	direct	high	722	0.999	GCA_011714705.1_00236
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	20633	21781	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	20634	21782	GCA_011714705_1_6_28	GCA_011714705_1_6_28	-	42017	.	PFAM:PF04860.11	Portal-protein	MGFLNLFKRDAPDVGFDFEELERMLGCLQLKSLAIDKSAEFVARIFAKSEFRYMVENHHVTSDWDYILNVRPNKNESASEFWQKVIYRLLTKNEVLIVLSDDKQLLVADAFTRRRYALYDDTFEMVSVGDYTFQRKFAMSDVIFLQYNNNRLQEYVSDLFSDYEKLHTRLVEALARNNQIRGVLATKANGTFDEDKRKKLQRYADNLFKSFTSKTVAIVPTMDGVEYSELTNTVGTTNLSVEELKKLRRQFDDEVADILGLPTALMHGDMADLSNSQKMFNSYCYESLVKKVGDALNHAMVSSAGYANQKKFVIFGEGGLDKFALAENIDKLISSGAMTRNEVRLELGLEAVPGGDSFLITKNYQGENEIEKGGNEDDNHSD*	hallmark_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0028	shell	direct	high	1148	0.999	GCA_011714705.1_00237
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	21837	23477	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	21838	23478	GCA_011714705_1_6_29	GCA_011714705_1_6_29	-	42017	.	PFAM:PF03354.14	Large-Terminase	MISHPLVDDYIKMAENGEVVVNKERKLLFKIIKEKIYPRDDLYFDNDLIDKFIRFAEKNFFPLAKYQLFLTPFIFLFRKVDEEPHFDEYLYTLARGGGKNGFMSARSSFFISPIYPIRDYDVTITANSEKQGKVSFEEVYETIQRRGLENHFYLTKMSITGRANNSVFSFRTNNPKTMDSARDGCLEFDEIHQFENDKAVKVQRSGLGKIAHVRTFYNGTNGYVREGFYDKLIEKSMQILNGEVDDFRLFPFICKLDSADEVDDMKNWPKANPMLDESTPYAKRLLARTKADYDDLELEPSGRQEFMTKRMNLPEADLEKDVTTRERLLACLRSPGIDLLGKSCVAGFDYASIRDFASVGLLFKNGDEFIWKQHSFARKAFLKAFKLKAPIQEWADRGLFTIVDGPSIDPRLLVEKLNEWSKFYQIELVCADGFRMDLLKPLLEEAGFEYEFLRNPGAIQSKVAPIIEDGFANERFIFENDNSMIWYTDNTYVKEDKDGNKRFLKKEPVRRKTDGFHALIAALYKRELVHESNVGEFLDMLEDWEF*	hallmark_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0029	shell	direct	high	1640	0.999	GCA_011714705.1_00238
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	23474	23812	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	23475	23813	GCA_011714705_1_6_30	GCA_011714705_1_6_30	-	42017	.	PFAM:PF05119.11	Small-Terminase	MEEYSEKNIKELENQLLSKIGYFSPRKKDAIQYEKVNRYLYLVRLLYELKAKLHEDGLVITVHNGQQRFQKANSLIKEINTTSNQLLAIERSFDFDVENSPVEKATSGSDLL*	hallmark_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0030	shell	direct	high	338	0.997	GCA_011714705.1_00239
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	23931	24227	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	23932	24228	GCA_011714705_1_6_31	GCA_011714705_1_6_31	-	42017	.	PDB:5H0M_A	HNH-endonuclease	MIEVSTREERNQFYNSSEWRTIRRQALKRDHYECVWCRDEGKVTTTNLEVDHIKELEFYPEFALDIDNLRTLCKACHNKRHDRFDKNDRNFRKDEWWG*	common_virus_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0031	.	unmatched_CDS	none	0	0	.
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	24441	24983	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	24442	24984	GCA_011714705_1_6_32	GCA_011714705_1_6_32	-	42017	.	CDD:cd01192	site-specific-tyrosine-recombinase	MNIVEPIRDKDDIQAMKDYLREWNERNYILFLFGINSGLRVGDILKIRVKDVQGWYIKLKEQKTGKKKKIKMTKTLKREVREYIQNKPHHHFLFQSRVGKNKPLDRRTVDWILKVAASECGIENIGTHSMRKTFGYHYYKKTKDIAMLMSLFNHSSPAITLRYIGIRQDQQDKAMSNFGL*	common_virus_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0032	shell	direct	high	542	0.998	GCA_011714705.1_00240
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	25283	25711	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	25284	25712	GCA_011714705_1_6_33	GCA_011714705_1_6_33	-	42017	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MQIELLDIIDEKKTRKEAIKVLKKYSRLRRIAGEEYAPKITISYSLEPKSSSGQTSKQVESMVLRRVSAQQDLELIAKAINNLSDMEYTRILIERYCRKKRREDYSIYSELGYSSSEYYRILNKALLEFAESYQASNLLVYK*	mmseqs_cdd	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0033	persistent	direct	high	428	0.998	GCA_011714705.1_00241
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	25782	26012	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	25783	26013	GCA_011714705_1_6_34	GCA_011714705_1_6_34	-	42017	.	PDB:2FJR_A	Repressor-protein-CI	MKDKLNPRQASRFAFLLKQKRKERKLSQEKLAAKLGYSRYLIAKWEKEESVPNIYNVEDICTYFAFPADIILGSRA*	common_virus_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0034	shell	direct	high	230	0.996	GCA_011714705.1_00242
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	26002	26181	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	26003	26182	GCA_011714705_1_6_35	GCA_011714705_1_6_35	-	42017	.	PFAM:PF04936.11	host-nuclease-inhibitor	MNEYALYQGETFVTIGTLEEISKETGIAERMLKYYTFASTQKRHPNGRAVIKIEVDDEG*	phrogs_hmm	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0035	shell	direct	high	179	0.994	GCA_011714705.1_00243
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	26174	26287	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	26175	26288	GCA_011714705_1_6_36	GCA_011714705_1_6_36	-	42017	.	PFAM:PF11753.7	kinase	MTDNINKPSHYQGANGLEDLKKARKNLDWLIEEMEHE*	phrogs_hmm	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0036	shell	direct	high	113	0.991	GCA_011714705.1_00244
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	26289	26801	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	26290	26802	GCA_011714705_1_6_37	GCA_011714705_1_6_37	-	42017	.	PFAM:PF13921.5	transcriptional-regulator,-D5-like	MAGRRWTEDEVDYILLAHNDNESTVEEVADFLGRTVSSVRCKSEIINKGKGQFTKRHWQDEEIRILRRYYQKVQDLNQLAKILNRSLDAVIIKANRLGLPRRKKKWDISKYDIETLGKMGMSCRQIACQLDRPLRLIRAVVYHYKIPVGKEEIQQHPWSFDNDMIFMRRT*	phrogs_hmm	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0037	shell	direct	high	512	0.998	GCA_011714705.1_00245
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	26788	26967	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	26789	26968	GCA_011714705_1_6_38	GCA_011714705_1_6_38	-	42017	.	.	hypothetical protein	MPDVEWIMENCHMMRDNGIWAGEKQISYASPDGQYTYYVNKRKDGTYYLHGAYKHYGRT*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0038	shell	direct	high	179	0.994	GCA_011714705.1_00246
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	26960	27367	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	26961	27368	GCA_011714705_1_6_39	GCA_011714705_1_6_39	-	42017	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MIPKFRAWDRLRKEMNYKVMVGNCDLSDENWTCPIIWIEEKKDWLHFDDYECIMQSTGLKDKNGKEIFEGDVLEIQDEGEVLGNAKLTWDNEQAVFMIEAISVDDIAPFHEILSDESYSYRVVGNIYENKELLDA*	mmseqs_cdd	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0039	shell	direct	high	407	0.998	GCA_011714705.1_00247
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	27364	27624	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	27365	27625	GCA_011714705_1_6_40	GCA_011714705_1_6_40	-	42017	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MKRFIAIWILVSAGLNIWQMDRIAELEKKKPMVIYKADNAGAEIFGKVVEKGRHGKLYTLTIRDYGVFVVTKDVYEKVKVGDEVML*	mmseqs_cdd	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0040	persistent	direct	high	260	0.996	GCA_011714705.1_00248
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	27621	28097	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	27622	28098	GCA_011714705_1_6_41	GCA_011714705_1_6_41	-	42017	.	pfam08241	Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	MGDIRILDACCGSRMFWFDKNESHTTFMDIRQEKFEIHGKKVNVNPDVVGDFRDMPFDDETFNLVVFDPPHLKWAGQNSIMRSQYGELDKVTWPEDLAKGFEECMRVLKVGGTLVFKWSDCQINVKEVLKSVPFKPLFGQQRGTTHWMTFMKFEEVTD*	mmseqs_cdd	nonviral_gene	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0041	shell	direct	high	476	0.998	GCA_011714705.1_00249
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	28132	28383	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	28133	28384	GCA_011714705_1_6_42	GCA_011714705_1_6_42	-	42017	.	.	hypothetical protein	MIQTLEEGMKNQSKRIKIPMEIRPFDVGYRIVNKHGQALALKNGASIFALPSLAEKAIKKKFSKDDPDFDIENISLKRSLLSI*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0042	shell	direct	high	251	0.996	GCA_011714705.1_00250
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	28383	28868	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	28384	28869	GCA_011714705_1_6_43	GCA_011714705_1_6_43	-	42017	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MNIKALIKKYEAVECVVGIVSGKTILKTVLRDLKQLDEQKSVKVPQFVAEWIEEARKACKDVAELFEFDFTNDEVRKWFMQERPFDLVARAWLDGYEVEEEKRYIVSLNNGQPLTKTQSGKVLYFNQNIITGNYKFTRKELEEAGFGWVFDCPGIEIEEVE*	mmseqs_cdd	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0043	shell	direct	high	485	0.998	GCA_011714705.1_00251
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	28870	29187	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	28871	29188	GCA_011714705_1_6_44	GCA_011714705_1_6_44	-	42017	.	.	hypothetical protein	MMEDLKQKVNEVYNWTVEDGKPQPPKQDLPQAVKDRADYFWEMAEDGMTFMGAMECIFADEKPTDYDLGATKGWLPKSKEFDDWIGYSPGMSQVVIAVYLIYGGN*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0044	shell	direct	high	317	0.997	GCA_011714705.1_00252
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	29159	29491	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	29160	29492	GCA_011714705_1_6_45	GCA_011714705_1_6_45	-	42017	.	.	hypothetical protein	MKYKVTEYHSDFQEEQTGTCELCFGTAWVENGSITVEDENGTETEIYLTVWDWGDYDTIYIDNVVNFSAWLQEREVDPIVEETERWSWLHELVEKYNEELEDDGRFKAKS*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0045	shell	direct	high	332	0.997	GCA_011714705.1_00253
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	29481	29672	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	29482	29673	GCA_011714705_1_6_46	GCA_011714705_1_6_46	-	42017	.	.	hypothetical protein	MNYDKQVVIEGLKRTIEQNEEKIIEYSKPCDARKRRIRALERDLLKKKNKELRKKVEELEDEI*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0046	shell	direct	high	191	0.995	GCA_011714705.1_00254
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	29659	29826	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	29660	29827	GCA_011714705_1_6_47	GCA_011714705_1_6_47	-	42017	.	.	hypothetical protein	MVGVTYQEIHLFVEFLKKQYGQGRPDYIEALNDLDGMAEVSYREAIERFLDDELR*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0047	persistent	direct	high	167	0.994	GCA_011714705.1_00255
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	29842	30237	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	29843	30238	GCA_011714705_1_6_48	GCA_011714705_1_6_48	-	42017	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MINNVTLVGRLTKDPELKYTPSNVAVATFTLAVNRNFKGANGEREADFINCMMWRKQAELFAEWCKKGNLVGVTGRIQTRNYENQEGRRVYLTEVVADGFERLEKRDDTANRSNIEEQMPGYALEEDDFPF*	common_virus_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0048	persistent	direct	high	395	0.997	GCA_011714705.1_00256
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	30227	30331	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	30228	30332	GCA_011714705_1_6_49	GCA_011714705_1_6_49	-	42017	.	PFAM:PF00436.24	single-strand-DNA-binding-protein	MIELIKEFGMAILWLFLGYLIGERAARKDKKDDQ*	phrogs_hmm	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0049	shell	direct	high	104	0.99	GCA_011714705.1_00257
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	30336	30551	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	30337	30552	GCA_011714705_1_6_50	GCA_011714705_1_6_50	-	42017	.	.	hypothetical protein	MLNLYFVYNGHCKFYLGMFDNVDDLIEQMEDHQWAFSAITQPRFQKHIGQRTTRFDYGAKDCYYLATFSGG*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0050	shell	direct	high	215	0.995	GCA_011714705.1_00258
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	30561	31022	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	30562	31023	GCA_011714705_1_6_51	GCA_011714705_1_6_51	-	42017	.	TIGR02072	malonyl-acyl carrier protein O-methyltransferase BioC. This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, carries out an enzymatic step prior to the formation of pimeloyl-CoA, namely O-methylation of the malonyl group preferentially while on acyl carrier protein. The enzyme is recognizable as a methyltransferase by homology. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]	MKDIRILDACCGSRMFWFDKNEPHTTYMDRREEEFEIHKKKINVKPDIVADFRDMPFDDETFNLVVFDPPHLLWAGQKSFMRAQYGQLDLLTWRLDLQQGFEECFRVLKTGGTLIFKWSDAQVNVKEILELVPQQPLFGQQRGTTHWMAFMKF*	mmseqs_cdd	nonviral_gene	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0051	shell	direct	high	461	0.998	GCA_011714705.1_00259
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	31022	31216	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	31023	31217	GCA_011714705_1_6_52	GCA_011714705_1_6_52	-	42017	.	.	hypothetical protein	MFILRHGTREDKPFLRSVVIGVTGLDISYSEEKKAMRFVSRGVAVQVGKALRGSFGNFYPVEVE*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0052	persistent	direct	high	194	0.995	GCA_011714705.1_00260
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	31231	32001	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	31232	32002	GCA_011714705_1_6_53	GCA_011714705_1_6_53	-	42017	.	PDB:4M4W_K	Replicative-helicase	MVDNVFEEIALSYHRNTEQQDEFCEKHNIPLIKILRTESVVCRMCESERIHEENQARVNELADAENERERKYYLEKFSLYDEVLKNATLDNFETPTEKEAEKLAFAKRICREWSEGARNNIVLQGEAGTGKSHLAFAMVKALSEYTKEIAIFINVTDLLMKIKADFSQEEFLVNKIASAKFLVLDDLGMEKDSEWSFTILYNILNKRSNTIITTNLISADIQKRYGRPFMSRLMKGVDKDHLMVFNDLTNKRKHYF*	rep_hall_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0053	persistent	direct	high	770	0.999	GCA_011714705.1_00261
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	31995	32153	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	31996	32154	GCA_011714705_1_6_54	GCA_011714705_1_6_54	-	42017	.	.	hypothetical protein	MGILELIEQFEIDYYPLSYEKKTLLADQPIHQVVACLSEMASWHECGGRLSW*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0054	persistent	direct	high	158	0.994	GCA_011714705.1_00262
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	32141	32959	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	32142	32960	GCA_011714705_1_6_55	GCA_011714705_1_6_55	-	42017	.	PFAM:PF09681.9	replisome-organiser	MLGMSEIKWIKITTDIFDDEKICLIDALPDPDAILVIWFKILTLAGKHNSNGLLMMTDKVHYTDEMLATIFRRPLNTVRMAIGVFEQFGMIEIIDGIISLPNWEKHQNVDGMEKIKEQTRNRVAKYRKKQKNLALGNVTGNVTVTDGNALEEDKDKNKNRLDKDKNKKRITTTNSSGGQENILELFQSEFRRLLSGFEIEEINHLLNENDVDLVKEALKTAINSGKPNIKYIGGILRNWQMNNVTTVEQVRQSEKKNKDKKEEQEAKDEWGY*	rep_hall_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0055	persistent	direct	high	818	0.999	GCA_011714705.1_00263
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	32943	33239	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	32944	33240	GCA_011714705_1_6_56	GCA_011714705_1_6_56	-	42017	.	.	hypothetical protein	MEELIESLDNLIMIVKELEGRESTSRHFITTWENDYKNLLLVKEYLTDYKKLAKDYRDVELKNKLLKIEKMELEGRYIYEDMRMKYRANRRKWGARYV*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0056	shell	direct	high	296	0.997	GCA_011714705.1_00264
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	33255	33575	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	33256	33576	GCA_011714705_1_6_57	GCA_011714705_1_6_57	-	42017	.	.	hypothetical protein	MFEPPILDQLMGVGALLIGFAGLCRHIKLQEERKEKERREEQEFASMITQGYNQAYERGREDKWQEIRKNIRREFKGFTYDNEPPVGLRPEPLALPEPKQSAIRLL*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0057	shell	direct	high	320	0.997	GCA_011714705.1_00265
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	33586	34308	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	33587	34309	GCA_011714705_1_6_58	GCA_011714705_1_6_58	-	42017	.	.	hypothetical protein	MNNKKAYKHKMKKENRPGLRNFFERYEHEDENLKKIVQDLSNEKFNPLDKPNDYNGSFGHDFMSIMWATLLIDILKNLRKEVSSSASDLDLKLGFTKGYPMASIVNTQTKPTKKNVKILSKIFDRMHILFPEETKRARERESLDKYIDVNEILQRTLLLHGFNESANALKNYENEIDSELESDEQTETDNRIMSNIYELVISDTIIQFNEDDTVLSVLKKIKEQTNLKFEVFETLKEKVI*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0058	shell	direct	high	722	0.999	GCA_011714705.1_00266
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	34320	34610	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	34321	34611	GCA_011714705_1_6_59	GCA_011714705_1_6_59	-	42017	.	.	hypothetical protein	MEGITLQLRLDGESAELFTNQLLAFAEKQVKEQLENDRMPINQQALMEKFGFTHSYIKKLERKGLRFRKQGKYIMYDINDVYEILELEKEVRKLRA*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0059	persistent	direct	high	290	0.997	GCA_011714705.1_00267
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	34715	34858	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	34716	34859	GCA_011714705_1_6_60	GCA_011714705_1_6_60	-	42017	.	.	hypothetical protein	MEDKIIELADYFISESTTYREAKIACEKLFRQVSHEIELRALESKTV*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0060	persistent	direct	high	143	0.993	GCA_011714705.1_00268
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	34974	35192	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	34975	35193	GCA_011714705_1_6_61	GCA_011714705_1_6_61	+	42017	.	.	hypothetical protein	MSRLQPRPQKNYPNYNWDDLDRFIQDILSDPSFKVCCVDPALYAIPKDEIIAECISAGYTVEEREDGILNIS*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0061	shell	direct	high	218	0.995	GCA_011714705.1_00269
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	35147	35305	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	35148	35306	GCA_011714705_1_6_62	GCA_011714705_1_6_62	-	42017	.	.	hypothetical protein	MRPRRYPYSGKRKKPIGQSIDLVARLFRLESQVISLANHEMFKMPSSRSSTV*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0062	shell	ambiguous	low	47	0.296	GCA_011714705.1_00269
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	35319	36029	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	35320	36030	GCA_011714705_1_6_63	GCA_011714705_1_6_63	-	42017	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MNEIFNFHGQEVRTLTIDDEPWFVGKDVADILGYSKARNAIALHVDEEDALKQGIPTSGGTQDMLIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIREDLDEDAFIALFTGQKKLREQQTSMLEDIDYLKSEQPIHPSYAQSLLKKRKARVVACLGGIDSPAYADKIFAQSVFRQAEIDFKDHFNISRYDLLPKKHADAALAYWMTWEPSTNTKMKIMELNAFSQA*	common_virus_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0063	shell	direct	high	710	0.999	GCA_011714705.1_00270
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	36148	36678	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	36149	36679	GCA_011714705_1_6_64	GCA_011714705_1_6_64	+	42017	.	.	hypothetical protein	MPQITNDNVQIWTLYITVIIAVIGFVFNTISLWQTKKATEDMAKPYINVYVDVYAVKNQQRTFVFKNFGQTPAYIDNIQIDGELDPLNSVHRFNSLIGNMIAPGQKFTSSIDPDYKGRITLTITYSDSKKHKYIDKFVLDATLASAMFYTVNESNKSDSPATAIRQSTMALLRDLR*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0064	shell	direct	high	530	0.998	GCA_011714705.1_00271
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	36704	36844	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	36705	36845	GCA_011714705_1_6_65	GCA_011714705_1_6_65	-	42017	.	.	hypothetical protein	MNANVNVFYELTCKDLNEAIDAKNKIIANTLDDETVEIKIEFLRDV*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0065	shell	direct	high	140	0.993	GCA_011714705.1_00272
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	36877	37068	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	36878	37069	GCA_011714705_1_6_66	GCA_011714705_1_6_66	-	42017	.	.	hypothetical protein	MEVFLYVVIVSAITSFLVTVMLLRGYSNRLTEMLENFFDNELQARKEIQKLTLDTMDRIANKK*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0066	shell	direct	high	191	0.995	GCA_011714705.1_00273
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	37078	37275	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	37079	37276	GCA_011714705_1_6_67	GCA_011714705_1_6_67	-	42017	.	.	hypothetical protein	MNNAAQKVTRIDRDAWEIATELANEYGVSICHIISESVRYCAENAEFKEMDVVVKRLVVGSKVLE*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0067	persistent	direct	high	197	0.995	GCA_011714705.1_00274
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	37287	37472	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	37288	37473	GCA_011714705_1_6_68	GCA_011714705_1_6_68	-	42017	.	PFAM:PF13744.5	transcriptional-repressor	MYGAKMRELRTAQKLGLRELAKRTLIDYTTLSRIENDLKAVTLSQAVVIAKALGCRVEDML*	phrogs_hmm	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0068	persistent	direct	moderate	171	0.919	GCA_011714705.1_00275
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	37603	37791	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	37604	37792	GCA_011714705_1_6_69	GCA_011714705_1_6_69	-	42017	.	COG1396	Transcriptional regulator, contains XRE-family HTH domain [Transcription]. 	MIGKKIKQLREKQGLSQDELAEKSGVSRMTITYLETGATKDVKLGTLNKIAVGLDVDLKDFM*	mmseqs_cdd	nonviral_gene	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0069	shell	direct	high	188	0.995	GCA_011714705.1_00276
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	38087	38233	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	38088	38234	GCA_011714705_1_6_70	GCA_011714705_1_6_70	-	42017	.	.	hypothetical protein	MLEQGVILALAISFLLDKHVERQHKKAEIEKLKQEIKKLALENKKASK*	.	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0070	shell	direct	high	146	0.993	GCA_011714705.1_00277
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	38397	39494	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	38398	39495	GCA_011714705_1_6_71	GCA_011714705_1_6_71	+	42017	.	PDB:2FJR_A	Repressor-protein-CI	MRIGTIIKEYRSVHKLSMEKFAELAGKSKGYISMLEKGENPNTKKPISPSLETLQKIASAMNMDFDILVSQLDDNQLISNSTTLSAYPDFLMHQTTDNIGNIQEISYRIRELRLANNLEQTEVSDYLGYKSDTTVSKWENGKNLPTGAKLVKLAKLFNTTTDYILHGKDINTTASPDLLTQQITDKVAQLTPDNKKIVLRTSEELLKSQDANGEMYTEQNEEETKVNEVSEVISLYQVEVVSETAAACGFNYGFGYDDTDRETIEVDEQPPRHDIATKVSGDSMQPDYQDGDILYLVDKGLTTYNGDLAVIAYGDRSYFKKIYTENGRLRLVSLNDKYEDITLDFPPAEDTHIKIYAVVGVYRGE*	common_virus_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0071	shell	direct	high	1097	0.999	GCA_011714705.1_00278
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	39495	40259	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	39496	40260	GCA_011714705_1_6_72	GCA_011714705_1_6_72	+	42017	.	PFAM:PF02452.16	antitoxin-mazE-like	MTIQNKQILKASKNFEKVHSTFKNNNKFRFLPNWLEKESNLFLSETQNTSKSYNVLKRGSLIFVDFGINIGSELSNRHWAVVLNKNDSPKSRNLTVLPISSKEKKFSVMIDEVIQQKSKRFLLPILDKIGFDYFSIIHYALTEITPFDLGSAEEIYQEFLIQYGDAYNSESAKEIYDNGAGMEKVENTNRKLKDLVNHYQRFNKISYAKCDQIKTISKDRIIYINELDPCGKIKVSDETLDRIDEKLKELYLKN*	phrogs_hmm	hypothetical_protein	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0072	shell	direct	high	764	0.999	GCA_011714705.1_00279
GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote	cenote	CDS	40772	41917	GCA_011714705.1	RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705.1_RXXL01000015.1	GCA_011714705.1|RXXL01000015.1	GCA_011714705_1_6	GCA_011714705_1_6@C0	40773	41918	GCA_011714705_1_6_73	GCA_011714705_1_6_73	+	42017	.	PDB:1XO0_A	Recombinase	MIKKYITKKGETRYLFQTYLGIDPATGKEKRTTRRGFKTIKEAKAAERDLLLDVEENGFSNNEDFQNPTFAEVADLWLDSYKSTVKPTTYQNVKKKLDVMIDLYFTDMKIQQISVAYCQKITIQLSNRYILYANYYSVISRIFKYAVSLDIIKLNPLDKIIKPKNRPLKGKENHYTKQELTEFLKVYKVNCKPVDYTFFHLLAFSGLRTGEAIGLMWSDVDFENKLLSISRTAVVIGKKQTVQDPKTKRSKRVITLDDETLNVLKLWKRQQIKEYFQAGVPYKRESNYIFTNSFGGWISPSAVKERLRRFFCEHKDVKKITPHGFRHTHASLLFEAGITAKIISDRLGHNNVQTTLDMYTHINDNQRFEVVDQLMDFIRSS*	common_virus_hmm	common_virus	C0	42018	0	42018	GCA_011714705.1|RXXL01000015.1@region_1_42018@tool_cenote_CDS_0073	persistent	direct	high	1145	0.999	GCA_011714705.1_00280