core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	2	1159	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	3	1160	GCA_011714755_1_44_1	GCA_011714755_1_44_1	-	104688	.	PDB:3GUD_A	Neck-appendage-protein	MIYLTEGNRPLNESYNDEIVHFGNNTYQLTFRFPTSNPKWELLKEETFLTADDLHGEQDFYIFEVEKQQGYIQVYANQVISLLNNYIVSSIEVDRVSGTRVLSAFAGSITRANPFSFFSDIDDRHTLNIKDKNAMEVLAKDKHSILGQWGGDMVRNGYNLRLLKNGGSENESLFMYKKNLSSYQHKTSTKSLKTRITFKTTVKGEGENAVDHDYMVVIDSPLLGNYSQIYEDVVEVNDQDVTDEASLIAYGKQYFRTSMCDMLEDNLEISVVGQSDVAVQMFDVVSIYHEWYGLDVRKKITKYTYSPMAKRLKSIGFGTFQSSLANAIGGIVNDAVLNESRNLHQIFEERLKKEIANADRAFDAEFTKREKAITDAIELAKAKAEE	hallmark_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0001	persistent	ambiguous	low	3	0.003	GCA_011714755.1_01608
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	1156	1854	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	1157	1855	GCA_011714755_1_44_2	GCA_011714755_1_44_2	-	104688	.	PDB:2X8K_A	Distal-Tail-Protein	MFYMIINGFNTSTIPHCVVTDFGQVEAAKPRVAEDANLYGANGSYRVLDGGYESYERTFSFYIPKLLDVSTIVEKFQPKDNVLEFSYQLGSVFYADFIGATYSPHGMHAWKLELKLSMQPFRYQKNLAPLIFTASGNVNNPGSVYSEPVIEIEGDGDISLTIGRTTMHLTIRRKVTIDCRHKKQNIYNADGVVQNTLRKRGGFFELAVGNNGLVFTGAVRKVTVRPNWRYIL*	hallmark_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0002	persistent	direct	high	698	0.999	GCA_011714755.1_01608
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	1854	6029	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	1855	6030	GCA_011714755_1_44_3	GCA_011714755_1_44_3	-	104688	.	PFAM:PF10145.8	minor-tail-protein	MASGTPLGQMYIELGLDVSKFSPTLNGAKNAVKYFQNNVRSLDSTLKGNEKNASLLQAKYKTLGQAIDSQRKVLDEMKKSFDKLDPGTAKFDKAAADIQRENAKLAVMEGQLRGVEKALQDVGRENSWSGKMDAWSEKFAKGGEKLRAMGDAMKPVSAALLAGFTLSTKKAIDFESQMNTTKSLLADTIPTADELNSTTQKLGESSKNWAKQYGISTASINEGMQEIIKKGFDANQTIEAMPAILDAAKASGEDFNTVMNATTNILQQFGLSTQDTERVTNSLTFVANKTAAGFADMGAAMEYVGPVAKNVGMNLEETAAAVGLLSNNGIAGEKAGTALRGALTRLLKPSEQNANAMEKLGFSAEEFRSGAIKLPDILDRIKKNTEGMTDAQKSALIATAFGTEAQTAMNILVDQGGDALRNLANETKGATTYTKDLANELSKSSKNGVERFKSSLEVLQINIGQKLLPLLTPVIDKVNQFIDWLSKAPPAVQSLAVGIGGFLALGYPFLNFLGNGATALSILIKHAGKLEGLLKGGLGLAKLTERAGKLKGLLQGGLGLAKVGSEATVLAEGAGAAASSSSLLSGAIGALTNPIGLLVGGAALLAGGLVYLGHKKDEARIKAEEFGSQLSDTARKELRDFQSKVDDTSTAVANFGTHAGDAEKVSEAFRKLHEEVAAGAEKANQRMEELAKKLGFSDEEIAKMKVKNDQVVSNTDAMANQVSEIYKRHNGDASKFSQEEKEIVLNNQREMIKARIEMMELSGEQQKAALQALNGEIGSLNETQLKHTRDVLKKALDEENQLYKTSKDGLKQLLDAKRIDQETYNKKIQELETNHQQTMEALGTKYYQVMQNLDAKVKARTGQSWNYWEEAKKVLEEYGLSYEVIGQKAAEASQKMGDSHSILAKYTSDMSKETREANDAWSLLVGNIDENNNFVIKSNVKEVIGEATKSAEGWEQLQFIVKNANINSNARVTIAEALVESGKWSTMTLEEKQLIVQNQAGLQAIFDSENHLRIWNSMPAEVKQLLLENTDVMNKAEEASKALYNYDALTPKQKELLATDENFRKAVARSTDTLTTWNATTPFTKDLKLDPTNVLNNGQLSIDKIMAWNLSNPENKSLNAIDNTSEAVASAKASVNSPKQEKPIDLLAKDQTAGVRNETSAAINAIKQHNPVDILAKNSTSSTVSEVKSVVNSIQDKTVTISARDNASGVLAGIRSWITRVTGDFFTNVFASRHAHGTNYHPGGLAMVNDQRNSTYKELVTLPDGRSFIPEGRDVLLPLPKGAKVLRADKTKRLMREMGVPKYAAGVGIPSDAKFLREMEEAQAKIVVQTKGDTNSKDSDKVVSEIAILRASMEKILTAILEKPSDTYLDADKISMSVYQRQGAIYAREGM*	hallmark_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0003	shell	direct	high	4175	1.0	GCA_011714755.1_01609
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	6085	6315	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	6086	6316	GCA_011714755_1_44_4	GCA_011714755_1_44_4	-	104688	.	.	hypothetical protein	MSRKEKARRRYWFWFTIFILYLAFGLYCICTNFVDIFGMLLLSPFIFASLPLYAYLYLGMFIWSFMSLAMDDFYKE*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0004	shell	direct	high	230	0.996	GCA_011714755.1_01610
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	6380	6499	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	6381	6500	GCA_011714755_1_44_5	GCA_011714755_1_44_5	-	104688	.	.	hypothetical protein	MSIRDVMDTSWEDLMGVLGSLETSEKEEVVDLADFLESL*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0005	shell	direct	high	119	0.992	GCA_011714755.1_01611
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	6565	6858	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	6566	6859	GCA_011714755_1_44_6	GCA_011714755_1_44_6	-	104688	.	.	hypothetical protein	MTKVQFTIKNDKGEDVLKTSKEITTRDYRDYLVMNESLTSDLSEVEKLDKQLGFIASLFEDVTVEQLLEYTDFAKVISIFTEIYSHLVGDVDPKEKS*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0006	shell	direct	high	293	0.997	GCA_011714755.1_01612
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	6904	7500	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	6905	7501	GCA_011714755_1_44_7	GCA_011714755_1_44_7	-	104688	.	PFAM:PF04630.11	major-tail-protein	MTVKGTALIGLKSVTIRVHDGQTPTVGQNLFTLEGKDNEGATQTARVTGLSSDPVKTYGSNVAYHVSNRGVGDVKVEMGLLDVPLALYTNALGYGDDDGIYYFGADTVAKNVSILIESNTADGEPVYYGFYKGQLSMDAIDFETLKDKANELATTSVNFTATASSDVATKGRYGAIVYGSDTEKLKKLKGQLNITAAG*	hallmark_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0007	shell	direct	high	596	0.998	GCA_011714755.1_01613
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	7517	7897	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	7518	7898	GCA_011714755_1_44_8	GCA_011714755_1_44_8	-	104688	.	PFAM:PF05657.10	tail-component	MIKDKLTELYDALEEDESLSGISIKSFERPESLGDGETSIVIIPVGPPMQTAHGSNTSLAKTFLYQINVESTNRVECKELQGRIEKIMEEQGFYQTEGGLEQWIPDIKRYVDVRTYRGMSALYEKY*	hallmark_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0008	shell	direct	high	380	0.997	GCA_011714755.1_01614
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	7897	8295	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	7898	8296	GCA_011714755_1_44_9	GCA_011714755_1_44_9	-	104688	.	PFAM:PF04883.11	tail-component	MSSGANLKGFDDILRNIEARLGEPVVRRKVNRALKETVEEFEPTFKRAMAVYADTGKTVGAVVHGNVTGTSSGVPMVKLGFKSPRWTLIHLNEFGYAKNGHPRGFGVMRRFFEASKPVFKSKVGMKLKQEFL*	hallmark_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0009	shell	direct	high	398	0.997	GCA_011714755.1_01615
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	8288	8677	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	8289	8678	GCA_011714755_1_44_10	GCA_011714755_1_44_10	-	104688	.	PDB:2KZ4_A	head-closure-knob	MKRSEGPSYRYKKPESQNGDLRTPLTFYTSKIKKGVDGRDVSYEKAFYTMGQTYSPSMKDVEIATGKAMKAKMTLKIRDPLTDYRPENRHFVEVGDIRLVGKKWQIIDIRPDFANRDFLIVLIGGGRDV*	hallmark_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0010	shell	direct	high	389	0.997	GCA_011714755.1_01616
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	8664	8852	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	8665	8853	GCA_011714755_1_44_11	GCA_011714755_1_44_11	-	104688	.	.	hypothetical protein	MIKVLKEFYDLKEGVLRQVGERFEATEERFAELKEHLPDYVELEKSSRSRSSKEVVSVNEEE*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0011	shell	direct	high	188	0.995	GCA_011714755.1_01617
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	8845	9135	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	8846	9136	GCA_011714755_1_44_12	GCA_011714755_1_44_12	-	104688	.	CDD:cd08054	Head-Tail-Connector-Protein	METEAKLHSLLIPFKERMRIFHSGEDANLSRMLESSQMVITRLVGSGNIHDHQIRELILERARYVYNDQVEFFYENFKADILALSLDKIEMEDSDD*	hallmark_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0012	shell	direct	high	290	0.997	GCA_011714755.1_01618
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	9149	10264	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	9150	10265	GCA_011714755_1_44_13	GCA_011714755_1_44_13	-	104688	.	PFAM:PF06673.10	Major-Capsid-protein	MMKLGNEFTTARQNFMNAVETGAPMEEQNKLYNEMIEALTDKLQDDAREAARKEIATMNPYDAQLTAEAREFFNNIEKLPPKGIEKLFPQETIDRIFEDMVAARPLLQHIGLRNAGIRLKFLKSSRTGQAVWGKINAEIQGQLKQEFAEEEAIQSKLTAFVVIPKDSEKFGPAWLQSYVSIQITEAFAAALEAGYLNGDGDNKPIGLSRTLTGTAESEKVTYAEKQAQKKPLTFADSATVVKELTEVYKYHSTKADNTTPVAVEGNLVMVVNPADAWDVKKQYTSLNAQGVYVTAMPYNLILVESVAQTSGKVTTFVKGRYDAFVGGGIEFGRFTETYALEDLNLYTAKQFAYGKAHDEKTAAVWTLSIAK*	hallmark_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0013	shell	direct	high	1115	0.999	GCA_011714755.1_01619
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	10283	11005	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	10284	11006	GCA_011714755_1_44_14	GCA_011714755_1_44_14	-	104688	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MTIIQIKGAIVSNDDRWFYDWLDMDATAPKDIVLPTTGEDVEVHINSGGGDVYAGSEIYTALRAYQGHVTVKIVGIAASAASVIAMAGDQVEISPTAQIMIHNVSAGVRGDHKALLHEAGVLEGFNKSIAYAYIDKTGKALDDLLDLMEGETWFDARSAVNHGFADKVMFESQEAPVLVASQTPVIPRDFIEKIRSAMTPDVELLADLVRDRLNNSLPIPEDKKKEDKTAEPVGLGRFPF*	common_virus_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0014	shell	direct	high	722	0.999	GCA_011714755.1_01620
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	10986	12134	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	10987	12135	GCA_011714755_1_44_15	GCA_011714755_1_44_15	-	104688	.	PFAM:PF04860.11	Portal-protein	MGFLNLFKRDAPDVGFDFEELERMLGCLQLKSLAIDKSAEFVARIFAKSEFRYMVENHHVTSDWDYILNVRPNKNESASEFWQKVIYRLLTKNEVLIVLSDDKQLLVADAFTRRRYALYDDTFEMVSVGDYTFQRKFAMSDAIFLQYNNNRLQEYVSDLFSDYEKLHTRLVEALARNNQIRGVLATKANGTFDEDKRKKLQRYADNLFKSFTSKTVAIVPTMDGVEYSELTNTVGTTNLSVEELKKLRRQFDDEVADILGLPTALMHGDMADLSNSQKMFNSYCYESLVKKVGDALNHAMVSSAGYANQKKFVIFGEGGLDKFALAENIDKLISSGAMTRNEVRLELGLEAVPGGDSFLITKNYQGENEIEKGGNEDDNHSD*	hallmark_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0015	shell	direct	high	1148	0.999	GCA_011714755.1_01621
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	12190	13830	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	12191	13831	GCA_011714755_1_44_16	GCA_011714755_1_44_16	-	104688	.	PFAM:PF03354.14	Large-Terminase	MISHPLVDDYIKMAENGEVVVNKERKLLFKIIKEKIYPRDDLYFDNDLIDKFIRFAEKNFFPLAKYQLFLTPFIFLFRKVDEEPHFDEYLYTLARGGGKNGFMSARSSFFISPIYPIRDYDVTITANSEKQGKVSFEEVYETIQRRGLEDHFYLTKMSITGRANNSVFSFRTNNPKTMDSARDGCLEFDEIHQFENDKAVKVQRSGLGKIAHVRTFYNGTNGYVREGFYDKLIEKSMQILNGEVDDFRLFPFICKLDSADEVDDMKNWPKANPMLDESTPYAKRLLARTKADYDDLELEPSGRQEFMTKRMNLPEADLEKDVTTRERLLACLRSPGIDLLGKSCVAGFDYASIRDFASVGLLFKNGDEFIWKQHSFARKAFLKAFKLKAPIQEWADRGLFTIVDGPSIDPRLLVEKLNEWSKFYQIELVCADGFRMDLLKPLLEEAGFEYEFLRNPGAIQSKVAPIIEDGFANERFIFENDNSMIWYTDNTYVKEDKDGNKRFLKKEPVRRKTDGFHALIAALYKRELVHESNVGEFLDMLEDWEF*	hallmark_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0016	shell	direct	high	1640	0.999	GCA_011714755.1_01622
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	13827	14165	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	13828	14166	GCA_011714755_1_44_17	GCA_011714755_1_44_17	-	104688	.	PFAM:PF05119.11	Small-Terminase	MEEYSEKNIKELENQLLSKIGYFSPRKKDAIQYEKVNRYLYLVRLLYELKAKLHEDGLVITVHNGQQRFQKANSLIKEINTTSNQLLAIERSFDFDVENSPVEKATSGSDLL*	hallmark_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0017	shell	direct	high	338	0.997	GCA_011714755.1_01623
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	14794	15348	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	14795	15349	GCA_011714755_1_44_18	GCA_011714755_1_44_18	-	104688	.	CDD:cd01192	site-specific-tyrosine-recombinase	MILVLNIVEPIRDKDDIQAMKDYLREWNERNYILFLFGINSGLRVGDILKIRVKDVQGWYIKLKEQKTGKKKKIKMTKTLKREVREYIQNKPHHHFLFQSRVGKNKPLDRRTVDWILKVAASECGIENIGTHSMRKTFGYHYYKKTKDIAMLMSLFNHSSPAITLRYIGIRQDQQDKAMSNFGL*	common_virus_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0018	shell	direct	moderate	543	0.978	GCA_011714755.1_01624
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	15636	16064	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	15637	16065	GCA_011714755_1_44_19	GCA_011714755_1_44_19	-	104688	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MQIELLDIIDEKKTRKEAIKVLKKYSRLRRIAGEEYAPKITISYSLEPKSSSGQTSKQVESMVLRRVSAQQDLELIAKAINNLSDMEYTRILIERYCRKKRREDYSIYSELGYSSSEYYRILNKALLEFAESYQAINLLVYK*	mmseqs_cdd	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0019	persistent	direct	high	428	0.998	GCA_011714755.1_01625
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	16135	16365	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	16136	16366	GCA_011714755_1_44_20	GCA_011714755_1_44_20	-	104688	.	PDB:2FJR_A	Repressor-protein-CI	MKDKLNPRQASRFAFLLKQKRKERKLSQEKLAAKLGYSRYLIAKWEKEESVPNIYNVEDICTYFAFPADIILGSRA*	common_virus_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0020	shell	direct	high	230	0.996	GCA_011714755.1_01626
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	16355	16534	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	16356	16535	GCA_011714755_1_44_21	GCA_011714755_1_44_21	-	104688	.	PFAM:PF04936.11	host-nuclease-inhibitor	MSEYALYDGDTFITMGTLAEISKETGIAERMLKYYTFASTQKRHPNGRAVIKIEVDDEG*	phrogs_hmm	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0021	shell	direct	high	179	0.994	GCA_011714755.1_01627
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	16527	16763	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	16528	16764	GCA_011714755_1_44_22	GCA_011714755_1_44_22	-	104688	.	PFAM:PF11753.7	nucelotide-kinase	MNPEIIDNINKPSHYQGANGLEAIDVVHNFVGNLSGASAFFWGNAIKYMLRFQKKNGLEDLKKARKNLDWLIEEMEHE*	common_virus_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0022	shell	direct	high	236	0.996	GCA_011714755.1_01628
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	16760	17182	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	16761	17183	GCA_011714755_1_44_23	GCA_011714755_1_44_23	-	104688	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MTPKFRVWDSVEKKFVEHFFITDNGLICNMEKPTSDSKLLIPIEKSELILMQSTGLKDKNGVEIFEEDVVSRNSGMPSVVKFGKWIYEEDFGYKIKNIGFHLNSSYDDEWFQAMDYEDIRKNYEVIGNIYENPELLEDKE*	mmseqs_cdd	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0023	shell	direct	high	422	0.998	GCA_011714755.1_01629
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	17179	17670	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	17180	17671	GCA_011714755_1_44_24	GCA_011714755_1_44_24	-	104688	.	PFAM:PF03819.16	MazG-like-pyrophosphatase	MNTLEKVKQWFIDRDLENGGRLDKQSLKLSEEFGELCAGYLKKNEKLTKDSIGDCAVVIVGLGLLSKVDLDSIFEESKNVRKNDIMTSFAYANTCISNIQTEQHLKLMTLRIKSLTLLIGHLKSISKSLGYDFEECFELAYQEIKDRKGRWIDGSFVKEEDLA*	phrogs_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0024	shell	direct	high	491	0.998	GCA_011714755.1_01630
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	17667	17927	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	17668	17928	GCA_011714755_1_44_25	GCA_011714755_1_44_25	-	104688	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MKRFIAIWILLSAGLNIWQMDRIAELEKKKPMVIYKADNAGAEIFGKVVEKGRHGKLYTLTIRDYGVFVVTKDVYEKIRVGDEVLL*	mmseqs_cdd	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0025	persistent	direct	high	260	0.996	GCA_011714755.1_01631
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	17924	18085	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	17925	18086	GCA_011714755_1_44_26	GCA_011714755_1_44_26	-	104688	.	.	hypothetical protein	MSLTLNSTIRDLVLAIGEVIVGSDGKTTTAILEIPDQSFYLEIELKLKEEVID*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0026	shell	direct	high	161	0.994	GCA_011714755.1_01632
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	18085	18390	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	18086	18391	GCA_011714755_1_44_27	GCA_011714755_1_44_27	-	104688	.	.	hypothetical protein	MKYKVTEYHSDFQEEQTGTCELCFGTAWVENGSITVEDENGTETEIYLTVWDWGDYDTIYIDNVVNFSAWLQEREVDQIVEETERWSWLHELVEKYNEELE*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0027	shell	direct	high	305	0.997	GCA_011714755.1_01633
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	18380	18571	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	18381	18572	GCA_011714755_1_44_28	GCA_011714755_1_44_28	-	104688	.	.	hypothetical protein	MNYDKQVVIEGLKRTIEQNEEKIIEYSKPCDARKRRIRALERDLLKKKNKELRRKVEELEDEI*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0028	shell	direct	high	191	0.995	GCA_011714755.1_01634
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	18558	18725	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	18559	18726	GCA_011714755_1_44_29	GCA_011714755_1_44_29	-	104688	.	.	hypothetical protein	MVGVTYQEIHLFVEFLKKQYGQGRPDYIEALNDLDGMAEVSYREAIERFLDDELR*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0029	persistent	direct	high	167	0.994	GCA_011714755.1_01635
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	18741	19136	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	18742	19137	GCA_011714755_1_44_30	GCA_011714755_1_44_30	-	104688	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MINNVTLVGRLTKDPELKYTPSNVAVATFTLAVNRNFKGANGEREADFINCMMWRKQAELFAEWCKKGNLVGVTGRIQTRNYENQEGRRVYLTEVVADGFERLEKRDDTANRSNIEEQMPGYALEEDDFPF*	common_virus_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0030	persistent	direct	high	395	0.997	GCA_011714755.1_01636
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	19129	19230	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	19130	19231	GCA_011714755_1_44_31	GCA_011714755_1_44_31	-	104688	.	PFAM:PF00436.24	single-strand-DNA-binding-protein	MIEFIKEFGITFLCFFIGYSVVECATGKEKKDD*	phrogs_hmm	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0031	shell	direct	high	101	0.99	GCA_011714755.1_01637
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	19223	19450	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	19224	19451	GCA_011714755_1_44_32	GCA_011714755_1_44_32	-	104688	.	.	hypothetical protein	MLELYFVYNGHCKFYLGMFDNVDDLIEQMEDHQWAFSAITQPRFQKHIGQRTTRFDYGTKDCYYLATFSGGEEND*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0032	shell	direct	high	227	0.996	GCA_011714755.1_01638
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	19450	19644	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	19451	19645	GCA_011714755_1_44_33	GCA_011714755_1_44_33	-	104688	.	.	hypothetical protein	MFILKHGTREDKPFLRSAVIGVTGLDISCSEEKKAMRFVSRGAAVQVGKALRGSFGNFYPVEVE*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0033	persistent	direct	high	194	0.995	GCA_011714755.1_01639
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	19659	20429	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	19660	20430	GCA_011714755_1_44_34	GCA_011714755_1_44_34	-	104688	.	PDB:4M4W_K	Replicative-helicase	MVDNVFEEIALSYHRNTEQQDEFCEKHNIPLIKILRTESVVCRMCESERIHEENQARVNELADAENERERKYYLEKFSLYDEVLKNATLDNFETPTEKEAEKLAFAKRICREWSEGARNNIVLQGEAGTGKSHLAFAMVKALSEYTKEIAIFINVTDLLMKIKADFSQEEFLVNKIASAKFLVLDDLGMEKDSEWSFTILYNILNKRSNTIITTNLTSADIQKRYGRPFMSRLMKGVDKDHLMVFNDLTNKRKHYF*	rep_hall_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0034	persistent	direct	high	770	0.999	GCA_011714755.1_01640
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	20423	20581	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	20424	20582	GCA_011714755_1_44_35	GCA_011714755_1_44_35	-	104688	.	.	hypothetical protein	MGILELIEQFEIDYYPLSYEKKTLLADQPIHQVVACLSEMASWHECGGRLSW*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0035	persistent	direct	high	158	0.994	GCA_011714755.1_01641
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	20569	21384	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	20570	21385	GCA_011714755_1_44_36	GCA_011714755_1_44_36	-	104688	.	PFAM:PF09681.9	replisome-organiser	MSEIKWIKITTDIFDDEKICLIDALPDPDAILVIWFKILTLAGKHNSNGLLMMTDKVHYTDEMLATIFRRPLNTVRMAIGVFEQFGMIEIIDGIISLPNWEKHQNVDGMEKIKEQTRNRVAKYRKKQKNLALGNVTGNVTVTDGNALEEDKDKNKNRLDKDKNKKRITTTTTTSSGGQENILELFQSEFRRLLSGFEIEEINHLLNENDVDLVKEALKTAINSGKPNIKYIGGILRNWQMNNVTTVEQVRQSEKKNKDKKEEQEAKDEWGY*	rep_hall_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0036	persistent	direct	high	815	0.999	GCA_011714755.1_01642
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	21377	21673	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	21378	21674	GCA_011714755_1_44_37	GCA_011714755_1_44_37	-	104688	.	.	hypothetical protein	MEELIESLDNLIMIVKELEGRESTSRHFITTWENDYKNLLLVKEYLTDYKKLAKDYRDVELKNKLLKIEKMELEGRYIYEDMRMKYRANRRKWGARYV*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0037	shell	direct	high	296	0.997	GCA_011714755.1_01643
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	21689	22009	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	21690	22010	GCA_011714755_1_44_38	GCA_011714755_1_44_38	-	104688	.	.	hypothetical protein	MFEPPILDQLMGVGALLLGFAGLCRHIKLQEERKEKERREEQEFASMIIQVRNHAYERGREDKWQEIRKNIRREFKGFTYDNEPPVGLRPEPLALPEPKQSAIRLL*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0038	shell	direct	high	320	0.997	GCA_011714755.1_01644
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	22021	22743	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	22022	22744	GCA_011714755_1_44_39	GCA_011714755_1_44_39	-	104688	.	.	hypothetical protein	MNNKKAYKHKMKKENRPGLRKFFERYEHEDENLKKIVQDLSNEKFNPLDKPNDYNGSFGHDFMSIMWATLLIDILKNLRKEVSSSASDLDLKLGFTKGYPMASIVNTQTKPTKKNVKILSKIFDRMHILFPEETKRARERESLDKYIDVNEILQRTLLLHGFNESANALKNYENEIDSELESDEQTETDNRIMSNIYELVISDTIIQFNEDDTVLSVLKKIKEQTNLKFEVFETLKEKVI*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0039	shell	direct	high	722	0.999	GCA_011714755.1_01645
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	22755	23045	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	22756	23046	GCA_011714755_1_44_40	GCA_011714755_1_44_40	-	104688	.	.	hypothetical protein	MEGITLQLRLDGESAELFTNQLLAFAEKQVKEQLENDRMPINQQALMKKFGFTHAYIKKLERKGLRFRKQGKDIMYDVNDVYEILELEKEVRKLRA*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0040	persistent	direct	high	290	0.997	GCA_011714755.1_01646
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	23150	23293	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	23151	23294	GCA_011714755_1_44_41	GCA_011714755_1_44_41	-	104688	.	.	hypothetical protein	MEDKIIELADYFISESTTYREAKIACEKLLKQVSHEIELRAMESNTV*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0041	persistent	direct	high	143	0.993	GCA_011714755.1_01647
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	23410	23634	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	23411	23635	GCA_011714755_1_44_42	GCA_011714755_1_44_42	+	104688	.	.	hypothetical protein	MSKLSHKPNHVVKKLTWENLDNILLSNFSESTTDKPSAVIQLSDFEMSKTEIIEEATAQGYQVIDNSDGYLKFL*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0042	shell	direct	high	224	0.996	GCA_011714755.1_01648
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	23597	23752	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	23598	23753	GCA_011714755_1_44_43	GCA_011714755_1_44_43	-	104688	.	.	hypothetical protein	MRPRRYPYSGKRKKQSDRQIAKLKRDIDVNRTNISSLKFVIETLSNHQNYR*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0043	shell	ambiguous	low	39	0.25	GCA_011714755.1_01648
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	23754	23900	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	23755	23901	GCA_011714755_1_44_44	GCA_011714755_1_44_44	-	104688	.	.	hypothetical protein	MEDKIIELADYFISESTTYREAKIACEKLLKQVSHEIELRAMESRTRV*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0044	.	unmatched_CDS	none	0	0	.
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	24018	24242	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	24019	24243	GCA_011714755_1_44_45	GCA_011714755_1_44_45	+	104688	.	.	hypothetical protein	MSKLSHKPNHVVKKLTWENLDNILLSYFSESTTDKPSAVIQLSDFEMSKAEIIEEATAQGYQVIDNSDGYLKFL*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0045	shell	direct	high	224	0.996	GCA_011714755.1_01649
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	24205	24360	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	24206	24361	GCA_011714755_1_44_46	GCA_011714755_1_44_46	-	104688	.	.	hypothetical protein	MRPRRYPYSGKRKKQSDRQIAKLKRDIDVNRTNISSLKFVIETLSNHQNYR*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0046	shell	ambiguous	low	39	0.25	GCA_011714755.1_01649
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	24374	25084	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	24375	25085	GCA_011714755_1_44_47	GCA_011714755_1_44_47	-	104688	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MNEIFNFHGQEVRTLTIDDEPWFVGKDVADILGYSKARNAIALHVDEEDALKQGIPTSGGTQDMLIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIREDLDEDAFIALFTGQKKLREQQTSMLEDIDYLKSEQPIHPSYAQSLLKKRKARVVACLGGIDSPAYADKIFAQSVFRQAEIDFKDHFNISRYDLLPKKHADAALAYWMTWEPSTNTKMKIMELNAFSQA*	common_virus_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0047	shell	direct	high	710	0.999	GCA_011714755.1_01650
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	25132	25392	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	25133	25393	GCA_011714755_1_44_48	GCA_011714755_1_44_48	-	104688	.	.	hypothetical protein	MSSLSKNLLPIQNLEIKIDSDSSIPRVILNGVDFQTEDICLQGIKIIWETKKDEVPETLIQVDYINNREAPHIVSVKQSFKNTLLK*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0048	shell	direct	high	260	0.996	GCA_011714755.1_01651
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	25432	25584	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	25433	25585	GCA_011714755_1_44_49	GCA_011714755_1_44_49	-	104688	.	.	hypothetical protein	MANKGFKNSYIDRKKLSSSLKTLMTQQAIERAELAESQRKELEEFLKDLL*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0049	shell	direct	high	152	0.993	GCA_011714755.1_01652
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	25650	26180	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	25651	26181	GCA_011714755_1_44_50	GCA_011714755_1_44_50	+	104688	.	.	hypothetical protein	MPQITNDNVQIWTLYITVIIAVIGFVFNTISLWQTKKATEDMAKPYINVYVDVYAVKNQQRTFVFKNFGQTPAYIDNIQIDGELDPLNSVHRFNSLIGNMIAPGQKFTSSIDPDYKGRITLTITYSDSKKHKYIDKFVLDATLASAMFYTVNESNKSDSPATAIRQSTMALLRDLR*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0050	shell	direct	high	530	0.998	GCA_011714755.1_01653
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	26206	26346	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	26207	26347	GCA_011714755_1_44_51	GCA_011714755_1_44_51	-	104688	.	.	hypothetical protein	MNANVNVFYELTCKDLNEAIDAKNKIIANTLDDETVEIKIEFLRDV*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0051	shell	direct	high	140	0.993	GCA_011714755.1_01654
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	26358	26555	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	26359	26556	GCA_011714755_1_44_52	GCA_011714755_1_44_52	-	104688	.	.	hypothetical protein	MNNAAQKVTRIDKDAWEIATELANEYGVSICHIISESVRYCAENAEFKEMDVVVKRLVVGSKVLE*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0052	persistent	direct	high	197	0.995	GCA_011714755.1_01655
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	26567	26737	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	26568	26738	GCA_011714755_1_44_53	GCA_011714755_1_44_53	-	104688	.	PFAM:PF13744.5	transcriptional-repressor	MRELRTAQKLGLRELAKRTLIDYTTLSRIENDLKAVTLSQAVVIAKALGCRVEDML*	phrogs_hmm	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0053	persistent	direct	high	170	0.994	GCA_011714755.1_01656
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	26875	27066	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	26876	27067	GCA_011714755_1_44_54	GCA_011714755_1_44_54	-	104688	.	PFAM:PF13744.5	transcriptional-repressor	MQILLYELRKSKGLTQKNLADKLGISETAYRQKEKGQRPFTQDEMFFLHSFFNKPLQEIFLPR*	phrogs_hmm	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0054	shell	direct	high	191	0.995	GCA_011714755.1_01657
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	27082	27240	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	27083	27241	GCA_011714755_1_44_55	GCA_011714755_1_44_55	-	104688	.	.	hypothetical protein	MDWKKFLFGNFDYEKINQDNHAKTSLEIRGGLIPSILFWSGIIVLILYLIFR*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0055	shell	direct	high	158	0.994	GCA_011714755.1_01658
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	27600	28409	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	27601	28410	GCA_011714755_1_44_56	GCA_011714755_1_44_56	+	104688	.	PDB:2FJR_A	Repressor-protein-CI	MDLKKYIGNQIKLFRKSSGFTQDELAQKLNTTKQTISRYEKGERKANQDMLFSLCDILGVSIDDFFPSISNNSATPTASPDLLTQQITDKVVQLTPDNKKIVLRTSEELLKSQDANGEMYTEKNEEETKKNEVSEVISLYQVEVVSETAAASGFNYGFGYDDTDRETIEVDEQPPRHDIATKVSGDSMQPDYQDGDILYLVDKGLTTYNGDLAVIAYGDRSYFKKIYTENGRLRLVSLNDKYEDIILDFPPAEDTHIKIYAVIGVYRGE*	common_virus_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0056	shell	direct	high	809	0.999	GCA_011714755.1_01659
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	28410	29174	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	28411	29175	GCA_011714755_1_44_57	GCA_011714755_1_44_57	+	104688	.	PFAM:PF02452.16	antitoxin-mazE-like	MTIQNKQILKASKNFEKVHSTFKNNNKFRFLPNWLEKESNLFLSETQNTSKSYNVLKRGSLIFVDFGINIGSELSNRHWAVVLNKNDSPKSRNLTVLPISSKEKKFSVMIDEVIQQKSKRFLLPILDKIGFDYFSIIHYALTEITPFDLGSAEEIYQEFLIQYGDAYNSESAKEIYDNGAGMEKVENTNRKLKDLVNHYQRFNKISYAKCDQIKTISKDRIIYINELDPCGKIKVSDETLDRIDEKLKELYLKN*	phrogs_hmm	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0057	shell	direct	high	764	0.999	GCA_011714755.1_01660
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	29687	30832	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	29688	30833	GCA_011714755_1_44_58	GCA_011714755_1_44_58	+	104688	.	PDB:1XO0_A	Recombinase	MIKKYITKKGETRYLFQTYLGIDPATGKEKRTTRRGFKTIKEAKAAERDLLLDVEENGFSNNEDFQNPTFAEVAELWLDSYKSTVKPTTYQNVKKKLRIIIDSYFTDMKIQQISVAYCQKVAIQLSNRYILYANYYSVISRIFKYAVSLDIIKLNPLDKIIKPKNRPLKGKENHYTKQELTEFLKVYKVNCKPVDYTFFHLLAFSGLRTGEAIGLMWSDVDFENKLLSISRTAVVIGKKQTVQDPKTKRSKRVITLDDETLNVLKLWKRQQIKEYFQAGVPYKRESNYIFTNSFGGWISPSAVKERLRRFFCEHKDVKKITPHGFRHTHASLLFEAGITAKIISDRLGHNNVQTTLDMYTHINDNQRFEVVDQLMDFIRSS*	common_virus_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0058	persistent	direct	high	1145	0.999	GCA_011714755.1_01661
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	30965	31534	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	30966	31535	GCA_011714755_1_44_59	GCA_011714755_1_44_59	+	104688	.	COG4116	Predicted triphosphatase or cyclase YjbK, contains CYTH domain [General function prediction only]. 	MKHLEIELKTLLKKDEYDRLKDQFTGVTPVLQKNYYIDTPDFELREKKVAMRIRTFEDWAELTLKVPQSVGNMEYNQKLQLKDAENYLSKKEFPQGIVLDELAKHGIQTSEWQVLGCLTTLRYEMQTAIGLMALDESQYFDMTDYELELEVENHEQGKQDFQQFLEENQSSYQKAPSKLVRFVKSMKNS*	mmseqs_cdd	nonviral_gene	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0059	persistent	direct	high	569	0.998	GCA_011714755.1_01662
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	31647	32606	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	31648	32607	GCA_011714755_1_44_60	GCA_011714755_1_44_60	+	104688	.	PDB:5IV5_BD	Baseplate-wedge-protein	MSDRKNMKLFALNSNQEIAQKIAEAVGVPLGKLSSRQFSDGEIQVNIEESVRGYDVYIIQSTSFPVNNHLMELLIMVDACVRASAHSINVVLPYFGYARQDRIACPREPLTAKLVANMLVKAGVDRILTLDLHAVQVQGFFDIPVDNLFTVPLFAKHYCDKGLLGSDVVVVSPKNSGVKRARSLAEYLDAPIAIIDYSQDDATRNEGYIIGDVEGKKAILIDDILNTGRTFSEAAKIVEREGATEIYAVSSHGLFVEGAAELLDNTNIKEILVTDSVATKEKTPKNVCYITASELIGDAIVRIHERKPVSPLFAYNKKK*	common_virus_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0060	persistent	direct	high	959	0.999	GCA_011714755.1_01663
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	32616	33731	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	32617	33732	GCA_011714755_1_44_61	GCA_011714755_1_44_61	+	104688	.	COG1104	Cysteine sulfinate desulfinase/cysteine desulfurase or related enzyme [Amino acid transport and metabolism]. 	MIYLDNAATTPMSAVAISAMTKVMQENHGNPSSIHGHGRQAGKLLREARQELAQLLRTKPQHIFFTSGGTEANNTTIIGYCLRHQEQGKHIITTAIEHHAVLETIDYLVQHFGFEATIIQPENQEITAQQIQEALRDDTILVSTMFANNETGNLLPIAEIGQILKQHPAAYHVDAVQAIGKIPIHPEELGIDFLTASAHKFHGPKGIGFLYASSMDFDSYLHGGDQEQKKRAGTENLAAIVGMVAALKEDLEKQEEHFQHVQNLETAFLAELEGIQYYVNRGQDHLPYVLNIGFPDQKNDLLLLRLDLAGISISTGSACTAGIVQSSHVLEAMYGANSERLKESVRISLSPQNTVEDLQTLAKTLKEIIGG*	mmseqs_cdd	nonviral_gene	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0061	persistent	direct	high	1115	0.999	GCA_011714755.1_01664
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	33736	34083	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	33737	34084	GCA_011714755_1_44_62	GCA_011714755_1_44_62	+	104688	.	pfam08866	Putative amino acid metabolism. Solution of the structure of the Lactobacillus plantarum protein from this family has indicated a potential new fold with remote similarities to TBP-like (TATA-binding protein) structures. This similarity, in combination with genomic context analysis, leads us to propose an involvement in amino-acid metabolism. The potentially novel fold is an alpha + beta fold comprising two beta sheets packed against a single helix. The enzyme is present in the cytosol.	MAFEKTIQLKNCRYDYTLSPSVKKFTLKDNTFFETKVGNYELTRLLEKVPNSGEGFQLKIIINKELTGAKINITDKFGLRLVDIFKSEDHHIHQEKFYFLMDSLVERGVFTKSER*	mmseqs_cdd	nonviral_gene	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0062	persistent	direct	high	347	0.997	GCA_011714755.1_01665
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	34091	34306	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	34092	34307	GCA_011714755_1_44_63	GCA_011714755_1_44_63	+	104688	.	4IAJ_B	Conserved domain protein	MFELTYKDSYHVERTLKYEDYEALMLALSGCVTLPDTLYVTSLTFNSQKIYQGLVGDLYRFLSHTDFLHQN*	hhsuite_tools	nonviral_gene	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0063	persistent	direct	high	215	0.995	GCA_011714755.1_01666
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	34389	35030	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	34390	35031	GCA_011714755_1_44_64	GCA_011714755_1_44_64	+	104688	.	PRK05472	redox-sensing transcriptional repressor Rex; Provisional	MKDKQFAIPKATAKRLSLYYRIFKRFHAEKIERANSKQIAEAIGIDSATVRRDFSYFGELGRRGFGYDVKKLMTFFADLLNDNSITNVMLVGIGNMGHALLHYRFHERNKMKIIMAFDLDDHPEVGTQTPDGIPIYGISQIKDKIKDADVKTAILTVPSVKSQEVANLLVDAGVKGILSFSPVHLHLPKDVVVQYVDLTSELQTLLYFMRKED*	mmseqs_cdd	nonviral_gene	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0064	persistent	direct	high	641	0.998	GCA_011714755.1_01667
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	35048	35737	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	35049	35738	GCA_011714755_1_44_65	GCA_011714755_1_44_65	+	104688	.	pfam07722	Peptidase C26. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C-terminus.	MKKPVIGITGNEKTHPDDDIMMSYAAKGFVEGVKDAGGIPIILPIGDQEMACHYISMIDKLILTGGQNVDPKFYGEPKTIDSDDYHLQRDIFELALIKEAIKQKKPIFSVCRGTQLFNVAMGGTLYQDIEDHWQNCSAEYTTQRLVTEPDTVLREIYGEISHINSFHHQSIKDLAPNLKIAAHDPKDGIIEAVMSTDDVAFLGVQWHPEFLFENRPKDKNLFDYVVNEL*	mmseqs_cdd	nonviral_gene	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0065	persistent	direct	high	689	0.999	GCA_011714755.1_01668
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	35734	36414	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	35735	36415	GCA_011714755_1_44_66	GCA_011714755_1_44_66	-	104688	.	PRK00024	DNA repair protein RadC. 	MYSISFQEDSLLPRERLAKEGVEALSNQELLAILLRTGTRQASVFEIAQKVLSNLSSLTDLKKMTLQELQSLSGIGRVKAIELQAMIELGHRIHKHETLEMESILSSQKLAKKMQQELGDKKQEHLVALYLNTQNQIIHQQTIFIGSATRSIAEPREILHYAIKHMATSLILVHNHPSGAVAPSRNDDHVTKIVKEACDLMGIVLLDHLIVSQSSYFSYREKTDLI*	mmseqs_cdd	nonviral_gene	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0066	persistent	direct	high	680	0.999	GCA_011714755.1_01669
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	36457	38748	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	36458	38749	GCA_011714755_1_44_67	GCA_011714755_1_44_67	-	104688	.	PDB:1UAA_B	Replicase	MNALLNGMNDRQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKLVNPWNILAITFTNKAAREMKERAYSLNPATQDCLIATFHSMCVRILRRDADHIGYNRNFTIVDPGEQRTLMKRILKQLNLDPKKWNERTILGTISNAKNDLIDDVAYAAQAGDMYTQIVSQCYTAYQKELRQSESVDFDDLIMLTLRLFDQNPDVLTYYQQKFQYIHVDEYQDTNHAQYQLVKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPQAKVVLLEENYRSTKTILQAANEVIKNNKNRRPKNLWTQNADGEQIVYYRANDELDEAVFVAKTIDELGRSQNFLHKDFAVLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDIIAYLNLIANLSDNISFERIINEPKRGIGPGTVEKIRDFANVQNMSMLDSSANIMLSGIKGKAAQSIWDFANMILDLREQLDQLSITELVEAVLEKTGYVDILNAQATLESKARVENIEEFLSVTKNFDDTSDGPEEETGLDKLSRFLNDLALIADTDSGSQETSEVTLMTLHAAKGLEFPVVFLIGMEENVFPLSRAAEDPDELEEERRLAYVGITRAEKILYLTNANSRLLFGRTNYNRPTRFINEISSDLLEYQGLARPANTSFKASYSSGGVAFGQGMSLAQALQDRKRSAAPKSIQSSGLPFGQFTAGAKSASSEANWSIGDIALHKKWGEGTVVEVSGSGATQELKINFPEVGLKKLLASVAPIEKKI*	common_virus_hmm	common_virus	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0067	persistent	direct	high	2291	1.0	GCA_011714755.1_01670
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	38912	39184	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	38913	39185	GCA_011714755_1_44_68	GCA_011714755_1_44_68	-	104688	.	.	hypothetical protein	MLGADIMRFSDFKIFSNSVCNHIITEGLGFRALLLYTISKAKLGENILVSQSIVPVEVLRYRCFGFKKRNGILFNVRIANLKFTFFILMY*	.	hypothetical_protein	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0068	persistent	direct	moderate	255	0.934	GCA_011714755.1_01671
GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote	cenote	CDS	39265	40125	GCA_011714755.1	RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755.1_RXXN01000004.1	GCA_011714755.1|RXXN01000004.1	GCA_011714755_1_44	GCA_011714755_1_44@C0	39266	40126	GCA_011714755_1_44_69	GCA_011714755_1_44_69	-	104688	.	PRK07281	methionyl aminopeptidase. 	MITLKSAREIEAMDKAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENFLPLQIGVDGAMMDYPYATCCSLNDEVAHAFPRHYILKDGDLLKVDMVLGGPIAKSDLNVSKLNFNNVEQMKKYTQSYSGGLADSCWAYAVGTPSEEVKNLMDVTKEAMYKGIEQAVIGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGIAGRGLRLREGMVLTIEPMINTGDWEIDTDMKTGWAHKTIDGGLSCQYEHQFVITKDGPVILTSQGEEGTY*	mmseqs_cdd	nonviral_gene	C0	40126.0	0	40126	GCA_011714755.1|RXXN01000004.1@region_1_40126@tool_cenote_CDS_0069	persistent	direct	high	860	0.999	GCA_011714755.1_01672
GCA_011714755.1|RXXN01000059.1@region_1_4191@tool_cenote	cenote	CDS	1	273	GCA_011714755.1	RXXN01000059.1	GCA_011714755.1|RXXN01000059.1	GCA_011714755.1_RXXN01000059.1	GCA_011714755.1|RXXN01000059.1	GCA_011714755_1_54	GCA_011714755_1_54	2	274	GCA_011714755_1_54_1	GCA_011714755_1_54_1	-	4191	.	PFAM:PF14606.5	neck-protein	MVCNLNMTNLRQIDGGHLIKQGDLASTFGFALLDEDYQVISSLEGEEALISLTKEGYQWKKQVTVIGQGVSFHLDAILPIGSYRLEITAGG	phrogs_hmm	hypothetical_protein	NaN	.	0	4191	GCA_011714755.1|RXXN01000059.1@region_1_4191@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_011714755.1|RXXN01000059.1@region_1_4191@tool_cenote	cenote	CDS	289	567	GCA_011714755.1	RXXN01000059.1	GCA_011714755.1|RXXN01000059.1	GCA_011714755.1_RXXN01000059.1	GCA_011714755.1|RXXN01000059.1	GCA_011714755_1_54	GCA_011714755_1_54	290	568	GCA_011714755_1_54_2	GCA_011714755_1_54_2	-	4191	.	PFAM:PF04531.12	holin	MTEIEHLLIRFLFSLIPVVVLYFSMKDRATKQENRMTAIEKDIENLREFRMSANKRLDNHDEQNKAILVLAEQVKSLGEDVRELKTLIQSKQ*	phrogs_hmm	hypothetical_protein	NaN	.	0	4191	GCA_011714755.1|RXXN01000059.1@region_1_4191@tool_cenote_CDS_0002	persistent	direct	high	278	0.996	GCA_011714755.1_01814
GCA_011714755.1|RXXN01000059.1@region_1_4191@tool_cenote	cenote	CDS	578	730	GCA_011714755.1	RXXN01000059.1	GCA_011714755.1|RXXN01000059.1	GCA_011714755.1_RXXN01000059.1	GCA_011714755.1|RXXN01000059.1	GCA_011714755_1_54	GCA_011714755_1_54	579	731	GCA_011714755_1_54_3	GCA_011714755_1_54_3	-	4191	.	.	hypothetical protein	MSKITLDQAKIDMYINLLERGAVDFSWVHKRWKDRVRKELKRRGLSHLAN*	.	hypothetical_protein	NaN	.	0	4191	GCA_011714755.1|RXXN01000059.1@region_1_4191@tool_cenote_CDS_0003	persistent	direct	high	152	0.993	GCA_011714755.1_01815
GCA_011714755.1|RXXN01000059.1@region_1_4191@tool_cenote	cenote	CDS	723	1265	GCA_011714755.1	RXXN01000059.1	GCA_011714755.1|RXXN01000059.1	GCA_011714755.1_RXXN01000059.1	GCA_011714755.1|RXXN01000059.1	GCA_011714755_1_54	GCA_011714755_1_54	724	1266	GCA_011714755_1_54_4	GCA_011714755_1_54_4	-	4191	.	PF07104.11	Protein of unknown function (DUF1366)	MNYEVAINPYLKGGENVTVVAIKMENKGRYSYEQCELPGDHTQDSEDALIQAVLELVRTELDPTSAIVKNQEQLAKTTEALERANQLMDGMQKVNLQNAQDIEDILARLEELEAQGEPDQAEKGETDEDTPQVTDTENQAEEAQPTPAVEDKKESEKEDDISETTNQESPSEDNGGSSNE*	hhsuite_tools	hypothetical_protein	NaN	.	0	4191	GCA_011714755.1|RXXN01000059.1@region_1_4191@tool_cenote_CDS_0004	persistent	direct	high	542	0.998	GCA_011714755.1_01816
GCA_011714755.1|RXXN01000059.1@region_1_4191@tool_cenote	cenote	CDS	1262	1468	GCA_011714755.1	RXXN01000059.1	GCA_011714755.1|RXXN01000059.1	GCA_011714755.1_RXXN01000059.1	GCA_011714755.1|RXXN01000059.1	GCA_011714755_1_54	GCA_011714755_1_54	1263	1469	GCA_011714755_1_54_5	GCA_011714755_1_54_5	-	4191	.	.	hypothetical protein	MDNHTIDKLVAESLVDRLADIELNYAHLNVHHRLALAELQAFKAVLEYDPALKELFDETQAKMKGNKE*	.	hypothetical_protein	NaN	.	0	4191	GCA_011714755.1|RXXN01000059.1@region_1_4191@tool_cenote_CDS_0005	shell	direct	high	206	0.995	GCA_011714755.1_01817
GCA_011714755.1|RXXN01000059.1@region_1_4191@tool_cenote	cenote	CDS	1461	4190	GCA_011714755.1	RXXN01000059.1	GCA_011714755.1|RXXN01000059.1	GCA_011714755.1_RXXN01000059.1	GCA_011714755.1|RXXN01000059.1	GCA_011714755_1_54	GCA_011714755_1_54	1462	4191	GCA_011714755_1_54_6	GCA_011714755_1_54_6	-	4191	.	PDB:3GUD_A	Neck-appendage-protein	RAGSIRQEILNATKDKADKTLVVAEAGKLREEFSNMQVGGRNYYRDSEKIQQSPFSFGFVFDNLDPYLSKSDIGTTWTLSFDCKLDEVDGSFPFHMMHNGGNGFGIEGQTKSTATREWQRFRLTGPVFFKEDAPSESKLQMILFNSDLGYGGTIFIRRIKLEKGTLATDWSPALEDTNGLITQAKASFERTAQELRTDLSAVQAYVAQDGQRQESLQRYTREESARQARAVREQISRDYVGKSSYQEDVEGIHRRIEGVKTSANREITSQIASYRQSADGTFRDISSQITTYKQDMTRNIANLSHQLAGKVETTDFQRVRESSQLYERILGNTENGIADKVARMAMTNQLFQVEVGKYSVSGPNLIKNSDFKNDTNKWVSTQNLGRLVKHSFYHNGQKDLMRLSNATKNKNFLSSHRFNLERNTDYVLNFRGFNNSALASYDVYILGRRAGESDGFTIFKKVVSSKKLSTSRCEDVSVTFNSEEMDNAYIRFENNGSSSGTADLYITEVDLYKGYKPRTWQPHPEDAVADANKKLEATQTKMTQLAGSWLVQNINSAGDLISGINLGANGHNRLSGKLTHITGETLIDRAVIKSAMVDKLKTANFESGSVTTAVLAAEAVTADKVKFDHAFIRKLIANDAFIGELTSKRIFATKIESVVNRSTFLEAYQGQIGGFTIGRFAQGRGRWISGVNQFSVGMGNGEGGSYNGENTAFWANWGYSWNSPGPNAWYVTTLGNMHCRNGANFHGRVDFSNSSRANFYGNTTFSRSPVFLNGIELGSKDVFGDGWNPKGGRNAVVWWNQVGSGSVKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIESKKHEEIGLIAQEAETIVPRIVSRDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMENRHG*	hallmark_hmm	common_virus	NaN	.	0	4191	GCA_011714755.1|RXXN01000059.1@region_1_4191@tool_cenote_CDS_0006	shell	direct	moderate	2664	0.976	GCA_011714755.1_01818
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	11345	12472	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	1	1128	GCA_011714755_1_9_15	GCA_011714755_1_9_15	-	44438	.	PDB:1Z19_B	Integrase	MWMEELPNGKYKFFERYKDPYTEKLKKVSVTMEKKTPQARNQSAILLQEKINKKLSTKQVESITFEEIYNLFYKSWAQTVKESTKHNCKSVDKKMKEVIPSDTILANLDRRFLQEAIEKIIESNGYITAKKVRHRLRGIFNYAVQYSYIENNEVDYTTIPQKPKTLEELEKKRNNFLTMQEIKALVDVLNRREYHQKYADMVLVLALTGMRYGELTALQLKNIDFENNKIEITGNFDSVNKIKTLPKTTNSIRTIKVSESVIEAIQRQIVRLSERFQPLSSDDYIFCFEKWNQPTTIACFIQILKKYGKQAKIEKNLSSHIFRHSHISFLAESGLPIKSIMDRVGHSNAKMTLEIYSHTTEDMEDKLVNKLDTIF*	common_virus_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0001	shell	direct	high	1127	0.999	GCA_011714755.1_00389
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	12524	12727	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	1180	1383	GCA_011714755_1_9_16	GCA_011714755_1_9_16	+	44438	.	.	hypothetical protein	MPFTILDILTLRVAKLCECGDFFELFPKWKQLLDKKKSSRIKYGYHHDMNLKSKPKLYGAKLLIAVL*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0002	cloud	direct	high	203	0.995	GCA_011714755.1_00391
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	13238	13381	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	1894	2037	GCA_011714755_1_9_17	GCA_011714755_1_9_17	-	44438	.	.	hypothetical protein	MKKLLTTSAILLTATVLVACSNNQSTTKDSSEQPKRTTNLLLKRLLA*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0003	shell	direct	high	143	0.993	GCA_011714755.1_00392
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	13445	14395	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	2101	3051	GCA_011714755_1_9_18	GCA_011714755_1_9_18	-	44438	.	COG4823	Abortive infection bacteriophage resistance protein  [Defense mechanisms]. 	MKPFKTIEEQIATLKIRGLSITDESKAAKYLLSNNYYNIINGYSKFFQHPGTDTYIDGVTFDEVSSLYTFDKDVKRAILQAILEAEHHIKSITAHRFAEAYPSQKYAYLNTNSYADNKILDVGFIVSKLSKIINTNKRYRGNSIHHYAHTHSDVPIWVLTDYLEFGDLRTIIENLPNSLQNEIARDLVSFISTNIPDFNDVFPPETLISFLKNINEVRNKCAHNNRLLNFRCRSNSTFWETIHNEEILMGDDSRKTVYSTIISLQCFISKAEFNILWNTLRKKVIKLEKKLPSIDINVINQSLGFPNDWHRNEPRV*	mmseqs_cdd	nonviral_gene	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0004	shell	direct	high	950	0.999	GCA_011714755.1_00393
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	14546	15343	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	3202	3999	GCA_011714755_1_9_19	GCA_011714755_1_9_19	-	44438	.	PDB:2FJR_A	Repressor-protein-CI	MKLGELLKSYRTEHKLSMDAFCELSDLTKGYISMLEKNEHPKSKKPIVPSYDTIEKIAKGMQISTEDLIDMLDDDQEIQINATPALLSKSPIQTIYDELKPPRQAKVLNYAKRQLDEQKNEEETKVNEVSEVISLYQVEVVSETAAASGFNYGFGYDDTDREIIEVDEQPPHHDIATKVSGDSMQPDYQDGDILYLVDKGLTTYNGDLAVIAYGDRSYFKKIYTENGRLRLVSLNDKYEDIILDFPPAEDTHIKIYAVIGVYRGE*	common_virus_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0005	cloud	direct	high	797	0.999	GCA_011714755.1_00394
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	15497	15772	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	4153	4428	GCA_011714755_1_9_20	GCA_011714755_1_9_20	+	44438	.	.	hypothetical protein	MNTLNEKAINIFKAVAKETLIQGTYEENFLYSQLETFCTNCRQFAFGWTELAEEIERQERYLLDAGFTQEEIDDIRFDAAFAGMLDKMNVA*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0006	shell	direct	high	275	0.996	GCA_011714755.1_00395
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	15845	15988	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	4501	4644	GCA_011714755_1_9_21	GCA_011714755_1_9_21	+	44438	.	.	hypothetical protein	MMEHIIKSLATKDTTTVILVLGLVNEARLWHKQYLAYKLKDKELKKK*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0007	shell	direct	high	143	0.993	GCA_011714755.1_00396
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	16158	16289	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	4814	4945	GCA_011714755_1_9_22	GCA_011714755_1_9_22	+	44438	.	.	hypothetical protein	MESVEIVELIKITFKRGKGTEDDPVRVVTQYWDKENVLIFEKD*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0008	shell	direct	high	131	0.992	GCA_011714755.1_00397
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	16286	16996	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	4942	5652	GCA_011714755_1_9_23	GCA_011714755_1_9_23	-	44438	.	PFAM:PF13643.5	DNA-binding-protein	MSFDLSKLSLGSRFAGNSKTFQCPVCSGFSSHLWTYNPIDINRDYKESIKFIIIAQCQACNQFSIWITNEIQITYGSRIVLNTSDATSTLIFPNVAEGVPKPNNDMPDDVKEIYIEAGEVLNISPRASAALSRLAIEKLVAHLNAQGKDLNTQIGSLVSKGMPIEIQQMLDSVRVIGNNAVHPGQIDIKDNKELALSLLSFINLIVDNRITQPKKILDIYNLLPDSYRNSIERRDN*	phrogs_hmm	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0009	shell	direct	high	710	0.999	GCA_011714755.1_00398
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	17053	17208	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	5709	5864	GCA_011714755_1_9_24	GCA_011714755_1_9_24	+	44438	.	.	hypothetical protein	MRPRRYPYSGKRKKQSDRQIAKLKRDIDVNRTNISSLKFVIETLSNHQNYR*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0010	shell	ambiguous	low	37	0.237	GCA_011714755.1_00399
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	17171	17395	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	5827	6051	GCA_011714755_1_9_25	GCA_011714755_1_9_25	-	44438	.	.	hypothetical protein	MSKLSHKPNHVVKKLTWENLDNILLSYFSESTTDKPSAVIQLSDFEMSKAEIIEEATAQGYQVIDNSDGYLKFL*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0011	shell	direct	high	224	0.996	GCA_011714755.1_00399
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	17511	17729	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	6167	6385	GCA_011714755_1_9_26	GCA_011714755_1_9_26	+	44438	.	PFAM:PF13744.5	transcriptional-repressor	MLEKHNIWCFLMWDKIEKQLKIKGWSMYRLAKESGVHPSNFSNLKAGRMKEMSWTNMCKIADALEISLDELR*	phrogs_hmm	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0012	shell	direct	moderate	140	0.639	GCA_011714755.1_00400
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	17742	17930	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	6398	6586	GCA_011714755_1_9_27	GCA_011714755_1_9_27	+	44438	.	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain  [Transcription]. 	MQGERLRKWREKEKMSQEELAEKSNVSRTTIHLIESGQSSTVKIRTLQKLAVVFNKQVKDFF*	mmseqs_cdd	nonviral_gene	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0013	cloud	direct	high	188	0.995	GCA_011714755.1_00401
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	18094	18435	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	6750	7091	GCA_011714755_1_9_28	GCA_011714755_1_9_28	+	44438	.	PFAM:PF04492.12	DNA-binding-protein	MMVVLANHPNWQVYPDEIAKRKGVNRKTIDKYFKIFEEAGYLRKIRKKPPGNGGSHIFRFFSDVKISDFQFDIMKQRLNLSIKRASMNYNSDIPKSEMSESEMSESEMSDFGH*	phrogs_hmm	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0014	cloud	direct	high	341	0.997	GCA_011714755.1_00402
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	18551	18676	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	7207	7332	GCA_011714755_1_9_29	GCA_011714755_1_9_29	+	44438	.	.	hypothetical protein	MRPRRYPDSGKRKKPINFQIDLEKFKRLSYEAIHDTSQVTQ*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0015	shell	direct	high	125	0.992	GCA_011714755.1_00403
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	18691	18834	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	7347	7490	GCA_011714755_1_9_30	GCA_011714755_1_9_30	+	44438	.	.	hypothetical protein	MIHHYITHYASNGKDYAEAWIQIDFLGMCFCVWKKRTTIERLYANED*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0016	shell	direct	high	143	0.993	GCA_011714755.1_00404
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	18831	18998	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	7487	7654	GCA_011714755_1_9_31	GCA_011714755_1_9_31	-	44438	.	pfam14168	YjzC-like protein. The YjzC-like protein family includes the B. subtilis YjzC protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length.	MANTPIKPGTDNQKPGRYVEVGPRGGKVTNGHTATIGKGDRLPPTSAKGNGWKKV*	mmseqs_cdd	nonviral_gene	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0017	shell	direct	high	167	0.994	GCA_011714755.1_00405
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	19115	19258	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	7771	7914	GCA_011714755_1_9_32	GCA_011714755_1_9_32	+	44438	.	.	hypothetical protein	MEDKIIELADYFISESTTYREAKIACEKLLKQVSHEIELRAMESRTV*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0018	persistent	direct	high	143	0.993	GCA_011714755.1_00406
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	19255	19425	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	7911	8081	GCA_011714755_1_9_33	GCA_011714755_1_9_33	+	44438	.	.	hypothetical protein	MKEAVKEFLKFRSRFTKIEWFEINQAIEARLNQKADQLKLDDLDLEIISSRLEKVI*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0019	shell	direct	high	170	0.994	GCA_011714755.1_00407
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	19418	19657	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	8074	8313	GCA_011714755_1_9_34	GCA_011714755_1_9_34	-	44438	.	.	hypothetical protein	MTEIHACLCGNWVNLSADDDCVMGPNMASPYIWWEENAELYSPISKPEANSMYHQDYIYIHYRGADYRIHPMFIQIVSR*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0020	shell	direct	high	239	0.996	GCA_011714755.1_00408
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	19776	20042	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	8432	8698	GCA_011714755_1_9_35	GCA_011714755_1_9_35	+	44438	.	.	hypothetical protein	METVQIVRIKDVIIEKISANDEELEHIFGCSKRQAGDMRREMKKLPSQQKYLRNDGQLVTIKGFDAYLQYRGSQSWKKEMSKTVKMTR*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0021	shell	direct	high	266	0.996	GCA_011714755.1_00409
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	20342	20599	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	8998	9255	GCA_011714755_1_9_36	GCA_011714755_1_9_36	+	44438	.	.	hypothetical protein	MINKDQIIKAQQEKIERIEQLQKKLHKLSTLGLLTTKLLGLPNELEKPLKVTHDISHVIKDVLDGMSPSEAIKQNMAEEDDEEEE*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0022	shell	direct	high	257	0.996	GCA_011714755.1_00410
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	20599	20946	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	9255	9602	GCA_011714755_1_9_37	GCA_011714755_1_9_37	+	44438	.	.	hypothetical protein	MFEPPLVSQLLGTGAVILGFIGAGLLAHQMDKQEEEKIRQKEEERREEQEFASMIIQGYNQAYERGREAQRQEIRKNIRREFKGFTYDNEPPQGLRPEPLALPEPRRSRYEKYLG*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0023	shell	direct	high	347	0.997	GCA_011714755.1_00411
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	20963	21106	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	9619	9762	GCA_011714755_1_9_38	GCA_011714755_1_9_38	+	44438	.	.	hypothetical protein	MTRIELENRVWLLANHEEKNELLDLGLTSKARYVKRVLELGKVYAHV*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0024	shell	direct	high	143	0.993	GCA_011714755.1_00412
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	21093	21215	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	9749	9871	GCA_011714755_1_9_39	GCA_011714755_1_9_39	+	44438	.	.	hypothetical protein	MLMFDYDRDIMQPPEEREELDPSQYIYVGCGQYRYVGDEV*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0025	shell	direct	high	122	0.992	GCA_011714755.1_00413
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	21212	21388	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	9868	10044	GCA_011714755_1_9_40	GCA_011714755_1_9_40	+	44438	.	.	hypothetical protein	MIQELHEEIDNWRAEYIHLGRELGEIINDQQDIILKLQNENRHLKRENWNLKKTKGRR*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0026	shell	direct	high	176	0.994	GCA_011714755.1_00414
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	21515	21988	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	10171	10644	GCA_011714755_1_9_41	GCA_011714755_1_9_41	+	44438	.	PFAM:PF05565.10	resistance-protein	MATLYELTGQFLDVYNLELDEETKLDTLDSIDWEIEYETKVENYIKVMKNLEADVEARKNEIKRLMELNKADEKKKEHLKDTLSASMSLTGHERVDTPLFKVSFRKSQAVEVDETVLPEYYKVATWKADKKRLKEDLKKGLEIIGASLVEHKNLSIR*	common_virus_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0027	shell	direct	high	473	0.998	GCA_011714755.1_00415
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	21999	22622	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	10655	11278	GCA_011714755_1_9_42	GCA_011714755_1_9_42	+	44438	.	pfam04404	ERF superfamily. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to ERF.	MTKLAFSELQKRMQLEKKKKQGVNYAFRNAEDIYTKFKEINTDWELTVSDDLFGVGERIFVKSTAIVSNGDKQFQSVGFAELDKVPVFKTGNQQMQVPQWTGAVSSYARKYALQGLFGIGEKDVDEYPSDMNEAENQQAKKANDPVISVEKANYYLKEIAAISVEKGKEDGSIVKWFLNHLGVVDYKMIKQSQIEDADILLAKLKGN*	mmseqs_cdd	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0028	shell	direct	high	623	0.998	GCA_011714755.1_00416
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	22626	23048	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	11282	11704	GCA_011714755_1_9_43	GCA_011714755_1_9_43	+	44438	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MLNNVVLVGRLTKDAELRYTQSNVAVATFTLAVNRTFKSENGEREADFINCVMWRKQAENLANWAKKGVLIGITGRIQTRTYDNQQGQRVYVTEVVAENFQLMEFKKDGSQQTVDNHDQQAPNFARNSNPMDISDDDLPF*	common_virus_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0029	shell	direct	high	422	0.998	GCA_011714755.1_00417
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	23061	23423	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	11717	12079	GCA_011714755_1_9_44	GCA_011714755_1_9_44	+	44438	.	PDB:2FJR_A	Repressor-protein-CI	MNRLKELRQAKKLSQKEIAKEMSISEKTLSRWENGESQIKPEKAQQLADYLEVSVGYLLGYESNPLERLKSLVDELKEHKDLLGVVDWYTAFDLANDILAIASVEKARWLGRLNAGEIDS*	common_virus_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0030	shell	direct	high	362	0.997	GCA_011714755.1_00418
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	23401	23826	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	12057	12482	GCA_011714755_1_9_45	GCA_011714755_1_9_45	+	44438	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MQERLILKFELNRKQMINSNDRPHFHQKAKTTKFLRQLAEYEGKNVLRDYFGLPYSEDKPCKVKVRIYPPTNRKYDPPNWSPTSKALFDGLTDAKIWTDDNYNVIVSTEFMHGGKSGNKNYRIELEIYEYHEILQRIVDGI*	common_virus_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0031	shell	direct	high	425	0.998	GCA_011714755.1_00419
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	23842	24009	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	12498	12665	GCA_011714755_1_9_46	GCA_011714755_1_9_46	+	44438	.	.	hypothetical protein	MIGVTYQEIHLFVEFLKKQYGQGRPDYIEALNDLDGMVEVSYREAIERFLDDEVR*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0032	persistent	direct	high	167	0.994	GCA_011714755.1_00420
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	23996	24184	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	12652	12840	GCA_011714755_1_9_47	GCA_011714755_1_9_47	+	44438	.	.	hypothetical protein	MKYDKQVVIEGLKRTIEQNEEKIVEYSKPCDARKRRIRALERDLLRKKNKELRRKVEELEDE*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0033	persistent	ambiguous	low	15	0.079	GCA_011714755.1_00420
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	24177	24725	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	12833	13381	GCA_011714755_1_9_48	GCA_011714755_1_9_48	+	44438	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MNKQELIEKLEQLSGYGSRDYIERNEILNLVKQLDEPQKVKVPQFVADWISFVKTNGLKFKNTYGFYEEIAPSDDVYRVMYYIFKESIADKEIRKWVVDNIDTFARAWLDGYEVEKEKRYRVKIKNVYHGDLGHAAPFEQFSFYTKERNRSGIRYEFNRKELEEAGFGWVFDCPGIEIEEVQ*	mmseqs_cdd	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0034	cloud	direct	high	548	0.998	GCA_011714755.1_00421
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	24725	25000	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	13381	13656	GCA_011714755_1_9_49	GCA_011714755_1_9_49	+	44438	.	.	hypothetical protein	MDMKELEKAGEIRQQIKELEKFINHKKTHLEEALILRQDPKFRLSIKNCTFYSDTTLFITSEVLSDAIKVALTRTIEDLKEQLIELGVEVD*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0035	cloud	direct	high	275	0.996	GCA_011714755.1_00422
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	24997	25257	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	13653	13913	GCA_011714755_1_9_50	GCA_011714755_1_9_50	+	44438	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MKRFIAIWILVSAGLNIWQMDRIRDLEEKKPLVIYKADNAGAEIFGKVVEKGRHGKLYTLTIRDYGIFVVTKDVYEKIRVGDEVLL*	mmseqs_cdd	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0036	persistent	direct	high	260	0.996	GCA_011714755.1_00423
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	25254	25745	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	13910	14401	GCA_011714755_1_9_51	GCA_011714755_1_9_51	+	44438	.	PFAM:PF03819.16	MazG-like-pyrophosphatase	MNTLEKVKQWFIDRDLENGGRLDKQSLKLSEEFGELCAGYLKKNEKLTKDSIGDCAVVIVGLGLLSKVDLDSIFEESKNVRKNDIMTSFAYANTCISNIQTEQHLKLMTLRIKSLTLLIGHLKSISKSLGYDFEECFELAYQEIKDRKGRWIDGSFVKEEDLA*	phrogs_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0037	shell	direct	high	491	0.998	GCA_011714755.1_00424
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	25742	26140	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	14398	14796	GCA_011714755_1_9_52	GCA_011714755_1_9_52	+	44438	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MTPKFRVWDSVEKKFVEHFFITDNGLICNMEKPTSDSKLLIPIEKSELILMQSTGLKDKNGKEIFDGDILEIQDEGEVLGNAKLTWDNEQAVFMIEAISVDDIAPFHEILSDESYSYRVVGNVYENKEVLDA*	mmseqs_cdd	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0038	cloud	direct	high	398	0.997	GCA_011714755.1_00425
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	26133	26312	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	14789	14968	GCA_011714755_1_9_53	GCA_011714755_1_9_53	+	44438	.	.	hypothetical protein	MPDVEWIMENCHMMRDNGIWAGEKQISYASPDGQYTYYVNKRKDGTYYLHGAYKHYGRT*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0039	shell	direct	high	179	0.994	GCA_011714755.1_00426
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	26299	26811	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	14955	15467	GCA_011714755_1_9_54	GCA_011714755_1_9_54	+	44438	.	PFAM:PF13921.5	transcriptional-regulator,-D5-like	MAGRRWTEDEVDYILLAHNDNESTVEEVADFLGRTVSSVRCKSEIINKGKGQFTKRHWQDEEIRILRRYYQKVQDLNQLAKILNRSLDAVIIKANRLGLPRRKKKWDISKYDIETLGKMGMSCRQIACQLDRPLRLIRAVVYHYKIPVGKEEIQQHPWSFDNDMIFMRRT*	phrogs_hmm	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0040	shell	direct	high	512	0.998	GCA_011714755.1_00427
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	26813	27037	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	15469	15693	GCA_011714755_1_9_55	GCA_011714755_1_9_55	+	44438	.	PFAM:PF11753.7	nucelotide-kinase	MTDNINKPSHYQGANGLEAIDVVHNFVGSLSGASAFFWGNAIKYMLRFQKKNGLEDLKKARKNLDWLIEELEKN*	common_virus_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0041	shell	direct	high	224	0.996	GCA_011714755.1_00428
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	27058	27411	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	15714	16067	GCA_011714755_1_9_56	GCA_011714755_1_9_56	-	44438	.	COG2337	mRNA-degrading endonuclease, toxin component of the MazEF toxin-antitoxin module [Defense mechanisms]. 	MTAKYDYIPEKQDIIWIDFDPSVGREIQKRRPAIVVSRREYSERTGFVAVCPITHGQSRLEEQGLLVPVRSNKVDGSVNPLQLYTFDFRERKAQKITTMDTTSFQKVVQLYNFIFEA*	mmseqs_cdd	nonviral_gene	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0042	shell	direct	high	353	0.997	GCA_011714755.1_00429
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	27395	27610	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	16051	16266	GCA_011714755_1_9_57	GCA_011714755_1_9_57	-	44438	.	PFAM:PF04014.17	transcriptional-regulator	MNTVKTRKVGNSVTVTIPKTLNVPEGQEMFVYKGVDNVIVLAPKIPDPFSGDADLRMEDDFEGVKFLDSEI*	phrogs_hmm	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0043	shell	direct	high	215	0.995	GCA_011714755.1_00430
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	27740	28186	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	16396	16842	GCA_011714755_1_9_58	GCA_011714755_1_9_58	+	44438	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MRLLKSVDVQFTKKNVYDVLESYRSYVRMAGAEYLPKITTTYSFEPKTFTGKNTATENMVIEHVDAEAEVLEIERAVNCIMDPYVRQVITKKYMDMKIQLSDKAIYMDLGYSESEFYRMLSRGALEFAEAYRKGKLIVFRKFLGDICK*	mmseqs_cdd	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0044	shell	direct	high	446	0.998	GCA_011714755.1_00431
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	28768	29262	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	17424	17918	GCA_011714755_1_9_59	GCA_011714755_1_9_59	+	44438	.	PFAM:PF03592.15	Terminase-small-subunit	MDIGLNQRQKMFASEYLRTGNVYQSAIFAGYSEAYAKTTASKLLENASIKTFIQTETEKMHDENILSAKEALSILSDIARGQRLEEVLMLNPVTGEVDRVTKKADNNTVIKAIAEILKRYPTAKQAEKLELEIEKLKSQIGVDSEQDDKLRDFAKALRGAFDNR*	hallmark_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0045	shell	direct	high	494	0.998	GCA_011714755.1_00433
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	29249	30466	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	17905	19122	GCA_011714755_1_9_60	GCA_011714755_1_9_60	+	44438	.	PDB:5OEA_B	Large-Terminase	MIIDRFTKRQEEVLTRVLNDDFFICGLHGAKRSGKTVVDNIVFMNEIDRVRTIADKLDIDEPMYILAGTSSTSIQNNIIQELYNMFDIELKYDKHGAFTLCGVKVVQVYTGSISGLKRARGFTAFGAYINEASLANEQVFKEIISRCSGEGARIIWDSNPDIPTHWLRRDYINSGDDMIIDFHFKLDDNTFMSDRYRENIKNATPAGVFYDRDILGLWVTGEGVVYRDFSENMFVDNVPEDITKVYAGVDWGYEHFGSIVVIGETSGGSAYLLEEHAHQYKEIDFWVDLAKNIKERYGNITFWADSARPEHVARFQREQLRTFNANKAVLSGIEEVAKLMKAGRFFDVSNKVSKFKDEVYQYIWNEKTGEPVKENDDVLDAVRYAIYSQHSQPKATVRRRSDYGL*	hallmark_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0046	shell	direct	high	1217	0.999	GCA_011714755.1_00434
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	30478	31497	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	19134	20153	GCA_011714755_1_9_61	GCA_011714755_1_9_61	+	44438	.	PDB:5A20_A	Portal-Protein	MYQYLTYPRDGYDEGSLKKDLIYKLITMHNTESSHLKKLKSYYLGEHAILEHTRRNVNAPNYKTVANHAKDIADTATGYFMGNPIKYNNTADGDIDELLTAFDGAEIDQVDAQNALNMAIYGRAYEYIYAKEGMAELDSTSIDPENTFMVYDDSIERKPLFAVYYYEVKDDTKDTTKYQAEVFTENLHYHMVLRSTDSGTTQNEQVTPHNLGQIPIIEYRNNHFAIGDYEQQISLIDAYNSLMGNRVNDKEQAVESILVLYGTQLADTPEDAKVAMKILSEEGLLELPGDSARAEFLKNTLDESATEILRTALKEDIYTFSHVPNLTDENFAGNTSGVK*	hallmark_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0047	shell	direct	high	1019	0.999	GCA_011714755.1_00435
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	31615	32148	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	20271	20804	GCA_011714755_1_9_62	GCA_011714755_1_9_62	+	44438	.	PFAM:PF05551.10	homing-endonuclease	MIKDKMHKHLNQVYYSMLARCYDEKHWAYKWYGKRGIGVSDEFSDVAKFRSWAMQNGVEFGLQLDRIDNDKDYSPSNCRWVPEHTNKRNRSDNVKYKGYILRDYLKKLSEENNISFSTLVYRYYRSIKRDDIIVNDETIDDILLNYKKYDLRQFSKGVDMSGKTIVRDEKGRFVTYY*	common_virus_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0048	shell	direct	high	533	0.998	GCA_011714755.1_00436
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	32378	32815	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	21034	21471	GCA_011714755_1_9_63	GCA_011714755_1_9_63	+	44438	.	PDB:5A20_A	Portal-Protein	MGLEMITKTKEANYKRGLRQRIAIFAHYLGMKQIALESHSIVPQFSRGLPKNLLEISQIVNNLEGKVTNRQLISLLPFVEDPDAELEALEEEKKKNMEDMSMFNKDNTKPEDEVEDEESGVLGEEESQSDLPADGQGRKAGRPVR*	hallmark_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0049	shell	direct	high	437	0.998	GCA_011714755.1_00437
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	32778	34274	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	21434	22930	GCA_011714755_1_9_64	GCA_011714755_1_9_64	+	44438	.	PFAM:PF06152.10	minor-capsid-protein	MDKAEKQADQFDKVYQEAKTYLDKEVNKIFDKFQRDYGLSQVDARQVLKNMKDKKNLNELRKVLEARPNAPNIQRLLADLDSPAYSFRMKRLERLSDDLDRMRESIYHSEKTGSDAFYSDLMKDSYYKATFDLQQQTGLAYGFSGLPESEIKHLQSFSWVGDGSTYSTNIWKNTGKLTSSIKDELLMSLMTGRGTRETAQAIAERFDVGQNDARRLVRTESAFFHNQMELLSYEEADIEKYIFVAVLDKRTSHICQEHDNKVYDRDKATPGVNCPPMHPWCRSTTVAYDEDADYSKLKRRARNPETGKTELVPADMTYKEWYSKYVAKDVKNEIQDYKKSDQTVSRYNTQKLFSDVSNAWDEIGKGGLSKEQLVGLLKSEYELGNFSSDITKLIGVSSAYIDVSSLATSLVRHGQQYSLDEFMLIKEAVQKPYLILDNSERVEKSIISYVKIPNKDKVIMEAVMVPRDEMLVIHFNKVGIRQVKKNGKNMLTLYKKEK*	hallmark_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0050	shell	direct	high	1496	0.999	GCA_011714755.1_00438
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	34564	35133	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	23220	23789	GCA_011714755_1_9_65	GCA_011714755_1_9_65	+	44438	.	PDB:6B0X_d	capsid-scaffolding-protein	MNEETQTVETVEEQKVPAEPAQQPQDEKKYTDADVDAIIDKKFAKWKSEQEAKENEAKKLAKMNADEKQKYQLDQREQELADREKAIARKELTAEAKAMLSERDLPVELVNVVDLTSAETVSQSVAVLQKSWEQAVQKGVQEKLKGGAPMKQAPVDSDGITKEEFARMGYQSRNELYQKNPELYKKLKG*	hallmark_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0051	shell	direct	high	569	0.998	GCA_011714755.1_00440
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	35139	35981	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	23795	24637	GCA_011714755_1_9_66	GCA_011714755_1_9_66	+	44438	.	PDB:4AN5_F	Major-Capsid-protein	MTAGQTKLATMVNPEVMADMVSAKLPKLIKFTPLAYVETALQGQPGNTLTVPAWEYAGDATEVGEGQAISPDKLTTKKTTMTIKKAAKGYEITDEALLSGLGDPLGQATYQLGLAIANKIDDDLVAVAKTATQHVAETPTTLEAIDKALDIFEDEEDAQYVAIINPKDATKLKTDVAKEWTKGSELGANMVVSGTFGEVAGVQIVRSKKVEEGKGFLVKVSPSQTQTDDANKYGAFVIMLKRDVAIETDRDILKKTTVITGDKHYGVYLYDPTRVVKFGE*	hallmark_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0052	shell	direct	high	842	0.999	GCA_011714755.1_00441
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	35993	36175	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	24649	24831	GCA_011714755_1_9_67	GCA_011714755_1_9_67	+	44438	.	PFAM:PF09124.9	endonuclease-VII	MSLLLRRHYIQEEQAGQYSDLENKTLEELKNLAKEAGITGAYKLSKAEIVEVLEDLKSEI*	phrogs_hmm	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0053	shell	direct	high	182	0.995	GCA_011714755.1_00442
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	36165	36353	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	24821	25009	GCA_011714755_1_9_68	GCA_011714755_1_9_68	+	44438	.	.	hypothetical protein	MKFKIKQDFYDWELNVKRLAGEELEITEERYAELADNFASNGVAISDVLEEILPEPEFLEED*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0054	shell	direct	high	188	0.995	GCA_011714755.1_00443
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	36355	36666	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	25011	25322	GCA_011714755_1_9_69	GCA_011714755_1_9_69	+	44438	.	PFAM:PF05135.12	head-tail-adaptor	MSIELLKKMTGEEDTQLLMLLQTRATNLILSETNRTSLTPALSRLIPEVAIELHNRSGAEGEHSRTEGGIAVVYGENGLSTGLLQRIRMHRLARVAGHVFEAE*	phrogs_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0055	shell	direct	high	311	0.997	GCA_011714755.1_00444
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	36647	36985	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	25303	25641	GCA_011714755_1_9_70	GCA_011714755_1_9_70	+	44438	.	PDB:2KX4_A	head-closure-knob	MFLKQSRLKPYPMRRFEKTVTEEGVVKEGYAKEAETVRLELWPASSKLQSEMYGERVNDILNANANKSATIKVKDGVCIDSPTEVTHRVISKKVYTYHQVLELERVRATRGR*	hallmark_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0056	shell	direct	high	338	0.997	GCA_011714755.1_00445
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	36960	37475	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	25616	26131	GCA_011714755_1_9_71	GCA_011714755_1_9_71	+	44438	.	PFAM:PF04883.11	putative-tail-component	MSELRGADRLIAKCRRLASKKTGEDIVLRAVHNAAIKVVQADAKRLAPGNNGELRNSIKTRVKMDGDKAIGEVYTNLHYAPYVEFGTGPKGQASHSGISPEVSVTYRSSPWYVHEDQINVGPYHFQKIGEFYKMYGQPAQPYLYPALRDNQERVSKNISDYVRRKIREQIK*	hallmark_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0057	shell	direct	high	515	0.998	GCA_011714755.1_00446
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	37472	37840	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	26128	26496	GCA_011714755_1_9_72	GCA_011714755_1_9_72	+	44438	.	PFAM:PF05657.10	tail-component	MINIKPVIYKELQKVADNVTDTYPSDWETFPVVIFLEEQNKPGDWFDDQEQKSSIRYKVDIFDDTSTSELAVKINQIFESLGLRRTDCQDVPDPSHLRHKVMRFEGVVDLHSELVFQFRMEN*	hallmark_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0058	shell	direct	high	368	0.997	GCA_011714755.1_00447
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	37843	38256	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	26499	26912	GCA_011714755_1_9_73	GCA_011714755_1_9_73	+	44438	.	PFAM:PF16463.4	tail-tube-protein	MLANGITLSYSETKGSYTKLVGLKEVPEFGIEPEKVENTTLEDKVKKYEFGIGDAGELEYKFSYNNSSETAPYRVLRKAADDKKKLYFEQAYPDGTKVNFEGQVSVKLGGGGVNAVIEFTLKIALQSELEFTDGLGG*	hallmark_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0059	shell	direct	high	413	0.998	GCA_011714755.1_00448
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	38261	38641	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	26917	27297	GCA_011714755_1_9_74	GCA_011714755_1_9_74	+	44438	.	PFAM:PF12363.7	tail-assembly-chaperone-protein	MALPYSIWKISDEKELKLRLSSHQAAKVEEKIGMNLLKIFMPEAGEEFPLPPLKVVLLLIHGALQKYENGYSLEDVYDLYDEYVDNGGDQTTFMTEVLMPLFEVSGFTPRGSKGKKTSKKKMTVVE*	hallmark_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0060	shell	direct	high	380	0.997	GCA_011714755.1_00449
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	38680	39030	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	27336	27686	GCA_011714755_1_9_75	GCA_011714755_1_9_75	+	44438	.	.	hypothetical protein	MFLDIGGKPLDFWDLTVLEIREMIESYNRVKIQERKEKIIDSYRLSQMISNHVSLLLSKDAKVFEFWEYAPELFVEEQQAVEQERQRQALLLHKERMRDFADRHNRKRKEEMNGNS*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0061	shell	direct	high	350	0.997	GCA_011714755.1_00450
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	39017	39580	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	27673	28236	GCA_011714755_1_9_76	GCA_011714755_1_9_76	+	44438	.	PFAM:PF04582.11	tail-length-tape-measure-protein	MATLDELKVMIDAEIAPFRKKMKEVENQVKGTSDQVKNATAKIREQSSSIGSAFGKLAKFAGFAILGKKLLDVGMYSTQTALEVSAAMNQIKRQMGESSQSFLKWVNDNANAMNMGVGEATNYGAVYSNLFSGFIKDTNKLSAYTAKMLQTSAVVAEGSGRTITDVMERIRSGLLGNTEAIDFCRTA*	phrogs_hmm	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0062	shell	direct	high	563	0.998	GCA_011714755.1_00451
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	39882	42908	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	28538	31564	GCA_011714755_1_9_77	GCA_011714755_1_9_77	+	44438	.	UniProtKB:A0A0R1V141_9LACO	minor-tail-protein-	MAMIESTEAFKKFANGQSWQQLDYQTQQQIRLMAILEQATAKYGDTLSNSVNGRISLFKSLMKDSALNLGNAMLPIINAIMPVLNSFAMVLKNVTAKLAEFIALMFNKKATVKDGVGGAVGDMGNAMKDAAGGAGDLADAVDDAGDSAGGLADNLGDSAKNAKKAAKELLGLLGFDEINILQKPKDDDAGGSGGGGKGGKGKGGGGGPFKDILPEVELTDMDNQFKSIFDGLGDKLKGLFDLFKKGFDAAFGPEGIERIKTALDQIAKTMGEIATDPRVVNAFNRMAEKIAYALGQVTGSIATIGLGIGVFLAESIANGLGRQKERITRALVALFDNIGNIAEAVGNIAQAFSSAFYDVITSTGAVRIGSAIVSTLLSLTSIIVEVGSKLAGSLFKGFEKVVVTSAPKISSVFQSLLDTVAPVFESIERSVNKFGDGLSRVYDEHVVPAINSIANAFNGLIDIIQILWENSWQPFAEFLSGVFGVSIEGISDLLGGGLLATLGLLADAIKLVADGFAVFSDWCKENKEPILALITAWQTINFLSWAEQAGGLAGAFELLSGKVSFIVSGIKNLGLALKALTFDKLVSFGETIYLNALYAKDFVVNSGKTIAQLGKTALELGKSALAWTAHTAKMGLATAAEFAHSVAAGVATAATWAFNAALAVLTSPITLVIAAIAALIAIGVLLYQNWDTVVEFAKTAWQGLCDFISGICQAIGEFFSGLWTKLQEIFEPIGQWFGEKFQQGWDAISNTFSKLGSWFGDRWNESKDALAEANTWLGDKFKSGRDKVNSAFEKVGSWFGDRWNDIKDGVKEADTWFGEKFESAKKKTQNPFQKIGSWFGDRWKNMQDALKEIPNWFKNLFNDAMDNAKNIVKSGIDKLKSFFNFDWSLPKIKLPHFNISGSFSLMPPRIPSFSVDWYARGGVFNSPSIIGVGEAGQEAVMPLERNTGWISILAQKLAERMPANNVPTGYSLPAGDIVIQIAGHEFGRVAIQEINKEHERAGQTLLKI*	hallmark_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0063	shell	direct	high	3020	0.998	GCA_011714755.1_00452
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	42917	43267	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	31573	31923	GCA_011714755_1_9_78	GCA_011714755_1_9_78	+	44438	.	.	hypothetical protein	MAQLTINGVAVKPPKSFQVGIQDIDGETGRNANGDMVRDRITTKRKLDCEWGMMTQGELSQLLHAVSSEFFEVSYPDPMDGQVTKTFYVGDRTAPSYSFTEKFKPWSGAKFNLVER*	.	hypothetical_protein	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0064	shell	direct	high	350	0.997	GCA_011714755.1_00453
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	CDS	43272	44435	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	31928	33091	GCA_011714755_1_9_79	GCA_011714755_1_9_79	+	44438	.	PFAM:PF07902.10	minor-structural-protein	MDALTRRQFDRAMFAKERTLAIRVGDYTSRDIKEASFEYGYIKGDTYKPGGTCAGSGKITFTSIITTFNKLDTLHPEIGLLVGDTYQWVKMGEYFINDIEIDRNRNTTTLELMDGMFKLNREYVTDLHFPAEVREVIQEICLKTGIELANDYFGISAMRYHVEQVPEGKKLSFRDMLSAMTQMIGMSCFFNREGKMEIRDLTESNITINADSYFLHGLTKSEIEYQIAGITCKTDKKPLTVGMKTGRSLELDNVFMTQSALNDLYYNLKNLTYYPYNLNYQGHLLLEVGQWVTIQTNKKETFKVPVLSQSFTFKGGLRGRISADSKAGNDTQYSYEGTITKQIKQQDGIEAKIQAQIEAADAAFDAEFTKREKAITDAIELAKAKAEE	common_virus_hmm	common_virus	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_CDS_0065	.	unmatched_CDS	none	0	0	.
GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote	cenote	tRNA	28637	28707	GCA_011714755.1	RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755.1_RXXN01000018.1	GCA_011714755.1|RXXN01000018.1	GCA_011714755_1_9	GCA_011714755_1_9@C2	17293	17363	tRNA-Trp	tRNA-Trp	+	44438	.	tRNAscan-SE score: 59.0	Trp	NA	tRNAscan-SE	.	C2	33094.0	11345	44439	GCA_011714755.1|RXXN01000018.1@region_11346_44439@tool_cenote_tRNA_0001	.	.	.	.	.	.