core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	2	1387	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	3	1388	GCA_011714835_1_21_1	GCA_011714835_1_21_1	-	25993	.	PFAM:PF07902.10	minor-structural-protein	MDALTRRQFDRAMFAKERTLAIRVGDYTSRDIKEASFEYGYIKGDTYKPGGTCAGSGKITFTSIITTFNKLDTLHPEIGLLVGDTYQWVKMGEYFINDIEIDRNRNTTTLELMDGMFKLNREYVTDLHFPAEVREVIQEICLKTGIELANDYFGISAMRYHVEQVPEGKKLSFRDMLSAMTQMIGMSCFFNREGKMEIRDLTESNITINADSYFLHGLTKSEIEYQIAGITCKTDKKPLTVGMKTGRSLELDNVFMTQSALNDLYYKLKNLTYYPYNLNYQGHLLLEVGQWVTIQTNKKETFKVPVLSQSFTFKGGLRGRISADSKAGNDTQYSYEGTITKQIKQQDGIEAKIQAQIEAADAAFDAEFTKREKAITDAIELAKAKAEEVKQEVSDTINQRFNSFHDEPLRESRRKAEEALKQAGASSSLAQEAKRIGLDSVARLEAFKSQTRSAQTALSGDL	common_virus_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	1392	1742	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	1393	1743	GCA_011714835_1_21_2	GCA_011714835_1_21_2	-	25993	.	.	hypothetical protein	MAQLTINGVAVKPPKSFQVGIQDIDGETGRNANGDMVRDRITTKRKLDCEWGMMTQGELSQLLHAVSSEFFEVSYPDPMDGQVTKTFYVGDRTAPSYSFTEKFKPWSGAKFNLVER*	.	hypothetical_protein	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0002	shell	direct	high	350	0.997	GCA_011714835.1_00990
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	1751	4909	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	1752	4910	GCA_011714835_1_21_3	GCA_011714835_1_21_3	-	25993	.	UniProtKB:R4KJ43_9FIRM	Minor-tail-protein	MAMIESTEAFKKFANGQSWQQLDYQTQQQIRLMAILEQATAKYGNTLSNSVNGRISLFKSLMKDAALNLGNSMLPIINAIMPVLNSFAMVLKNVTAKLAEFIALMFNKKATVKDGVGGAVGDMGNAMKDAAGGAGDLADAVDDAGDSAGGLADNLGDSAKNAKKAAKELLGLLGFDEINILQKPKDDDAGGSGGGKGGKGKGGGGGPFKDILPEVELTDMDNQFKSIFDGLGDKLKGLFDLFKKGFDAAFRPEGIERIKTALDQIAKTMGEIATDQRVVNAFNRMVEKIAYALGQVTGSIATIGLGIGVFLAESIANGLGRQKERITRALVALFDNIGNIAEAVGNIAQAFSSAFYDVITSTGAVRIGSAIVSTFLSLSSKAVEIGSKLGGDLFKGLERIVTDNAPKLSSSLQGALDAIAPVFETIEKAVNRFGDAFSRVYDEHVSPFITTLSSGISQIVSVFLDSFDNNVTPALQRFSDGFEDVYNNHIGPAIDSLSQAFGGLVDVLKQVWEDNMQPFAEFLADTFGISIGEVADVLGGAILEALKILADTVKVVSDAFVAFSDWCKDNREIVSAMATAIGLVSTAWEGIKFMSWAEQAGGLAAGIGKLSGAFTDLVSAVKGLTVDKIKDFAESVYLNTLYAKDFVVNSGKLIVELGKTALELGKSALAWGVHAAQMGLAAAAEIAQSVAAGVAAAATWAFNAALAVLTSPITLVIAAIAALIAIGVLLYQNWDTVVEFAKTAWQGLCDFISGICQAIGEFFSGLWTKLQEIFEPIGQWFGEKFQQGWDAISNTFSKLGSWFGDRWNESKDALAEANTWLGDKFKSGRGKVNSAFEKVGSWFGDRWKDIKDGVKEADTWFGEKFESAKKKTQNPFQKIGSWFGDRWKNMQDALKEIPNWFKNLFNDAMDNAKNIVKSGIDKLKSFFNFDWSLPKIKLPHFNISGSFSLMPPRIPSFSVDWYARGGVFNSPSIIGVGEAGQEAVMPLERNTGWISILAQKLAERMPANNVPTGYSLPAGDIVIQIAGHEFGRVAIQEINKEHERAGQTLLKI*	hallmark_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0003	shell	direct	high	3153	0.998	GCA_011714835.1_00991
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	5211	5774	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	5212	5775	GCA_011714835_1_21_4	GCA_011714835_1_21_4	-	25993	.	PFAM:PF04582.11	tail-length-tape-measure-protein	MATLDELKVMIDAEIAPFRKKMKEVENQVKGTSDQVKNATAKIREQSSSIGSAFGKLAKFAGFAILGKKLLDVGMYSTQTALEVSAAMNQIKRQMGESSQSFLKWVNDNANAMNMGVGEATNYGAVYSNLFSGFIKDTNKLSAYTAKMLQTSAVVAEGSGRTITDVMERIRSGLLGNTEAIDFCRTA*	phrogs_hmm	hypothetical_protein	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0004	shell	direct	high	563	0.998	GCA_011714835.1_00992
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	5761	6111	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	5762	6112	GCA_011714835_1_21_5	GCA_011714835_1_21_5	-	25993	.	.	hypothetical protein	MFLDIGGKPLDFWDLTVLEIREMIESYNRVKIQERKEKIIDSYRLSQMISNHVSLLLSKDAKVFEFWEYAPELFVEEKQAVEQERQRQALLLHKERMRDFADRHNRKRKEEMNGNS*	.	hypothetical_protein	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0005	shell	direct	high	350	0.997	GCA_011714835.1_00993
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	6150	6530	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	6151	6531	GCA_011714835_1_21_6	GCA_011714835_1_21_6	-	25993	.	PFAM:PF12363.7	tail-assembly-chaperone-protein	MALPYSIWKISDEKELKLRLSSHQAAKVEEKIGMNLLKIFMPEAGEEFPLPPLKVVLLLIHGALQKYENGYSLEDVYDLYDEYVDNGGDQTTFMTEVLMPLFEVSGFTPRGSKGKKTSKKKMTVVE*	hallmark_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0006	shell	direct	high	380	0.997	GCA_011714835.1_00994
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	6535	6948	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	6536	6949	GCA_011714835_1_21_7	GCA_011714835_1_21_7	-	25993	.	PFAM:PF16463.4	tail-tube-protein	MLANGITLSYSETKGSYTKLVGLKEVPEFGIEPEKVENTTLEDKVKKYEFGIGDAGELEYKFSYNNSSETAPYRVLRKAADDKKKLYFEQAYPDGTKVNFEGQVSVKLGGGGVNAVIEFTLKIALQSELEFTDGLGG*	hallmark_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0007	shell	direct	high	413	0.998	GCA_011714835.1_00995
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	6951	7319	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	6952	7320	GCA_011714835_1_21_8	GCA_011714835_1_21_8	-	25993	.	PFAM:PF05657.10	tail-component	MINIKPVIYKELQKVADNVTDTYPSDWETFPVVIFLEEQNKPGDWFDDQEQKSSIRYKVDIFDDTSTSELAVKINQIFESLGLRRTDCQDVPDPSHLRHKVMRFEGVVDLHSELVFQFRMEN*	hallmark_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0008	shell	direct	high	368	0.997	GCA_011714835.1_00996
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	7319	7831	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	7320	7832	GCA_011714835_1_21_9	GCA_011714835_1_21_9	-	25993	.	PFAM:PF04883.11	putative-tail-component	MSELRGADRLIAKCRRLASKKTGEDIVLRAVHNAAIKVVQADAKRLAPGNNGELRNSIKTRVKMDGDKAIGEVYTNLHYAPYVEFGTGPKGQASHSGISPEVSVTYRSSPWYVHEDQINVGPYHFQKIGEFYKMYGQPAQPYLYPALRDNQERVSKNISDYVRRKIREQI*	hallmark_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0009	shell	direct	high	512	0.998	GCA_011714835.1_00997
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	7806	8144	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	7807	8145	GCA_011714835_1_21_10	GCA_011714835_1_21_10	-	25993	.	PDB:2KX4_A	head-closure-knob	MFLKQSRLKPYPMRRFEKTVTEEGVVKEGYAKEAETVRLELWPASSKLQSEMYGERVNDILNANANKSATIKVKDGVCIDSPTEVTHRVISKKVYTYHQVLELERVRATRGR*	hallmark_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0010	shell	direct	high	338	0.997	GCA_011714835.1_00998
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	8125	8436	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	8126	8437	GCA_011714835_1_21_11	GCA_011714835_1_21_11	-	25993	.	PFAM:PF05135.12	head-tail-adaptor	MSIELLKKMTGEEDTQLLMLLQTRATNLILSETNRTSLTPALSRLIPEVAIELHNRSGAEGEHSRTEGGIAVVYGENGLSTGLLQRIRMHRLARVAGHVFEAE*	phrogs_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0011	shell	direct	high	311	0.997	GCA_011714835.1_00999
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	8438	8626	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	8439	8627	GCA_011714835_1_21_12	GCA_011714835_1_21_12	-	25993	.	.	hypothetical protein	MKFKIKQDFYDWELNVKRLAGEELEITEERYAELADNFASNGVAISDVLEEILPEPEFLEED*	.	hypothetical_protein	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0012	shell	direct	high	188	0.995	GCA_011714835.1_01000
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	8616	8798	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	8617	8799	GCA_011714835_1_21_13	GCA_011714835_1_21_13	-	25993	.	PFAM:PF09124.9	endonuclease-VII	MSLLLRRHYIQEEQAGQYSDLENKTLEELKNLAKEAGITGAYKLSKAEIVEVLEDLKSEI*	phrogs_hmm	hypothetical_protein	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0013	shell	direct	high	182	0.995	GCA_011714835.1_01001
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	8810	9652	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	8811	9653	GCA_011714835_1_21_14	GCA_011714835_1_21_14	-	25993	.	PDB:4AN5_F	Major-Capsid-protein	MTAGQTKLATMVNPEVMADMVSAKLPKLIKFTPLAYVETALQGQPGNTLTVPAWEYAGDATEVGEGQAISPDKLTTKKTTMTIKKAAKGYEITDEALLSGLGDPLGQATYQLGLAIANKIDDDLVAVAKTATQHVAETPTTLEAIDKALDIFEDEEDAQYVAIINPKDATKLKTDVAKEWTKGSELGANMVVSGTFGEVAGVQIVRSKKVEEGKGFLVKVSPSQTQTDDANKYGAFVIMLKRDVAIETDRDILKKTTVITGDKHYGVYLYDPTRVVKFGE*	hallmark_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0014	shell	direct	high	842	0.999	GCA_011714835.1_01002
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	9658	10227	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	9659	10228	GCA_011714835_1_21_15	GCA_011714835_1_21_15	-	25993	.	PDB:6B0X_d	capsid-scaffolding-protein	MNEETQTVETVEEQKVPAEPAQQPQDEKKYTDADVDAIIDKKFAKWKSEQEAKENEAKKLAKMNADEKQKYQLDQREQELADREKAIARKELTAEAKAMLSERDLPVELVNVVDLTSAETVSQSVAVLQKSWEQAVQKGVQEKLKGGAPMKQAPVDSDGITKEEFARMGYQSRNELYQKNPELYKKLKG*	hallmark_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0015	shell	direct	high	569	0.998	GCA_011714835.1_01003
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	10378	11133	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	10379	11134	GCA_011714835_1_21_16	GCA_011714835_1_21_16	-	25993	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MELQIFKNEQFGEVRTTEVNQEIYFNLKDCCQILDIKNSKDAVKRLNSKGVVTTDLLTNGGVQQANFINEANFYKLVFQSRKPEAEKFADWVTSEVLPSIRKHGAYMTDQVAYNITHNKQALADLLLMAGNQLKEKEAVIKNLEAEKAVLSVENTIMKPKADYFDELVDRNLLTSFRETAKQLKIKERKFIDFLMEKKYIYRDKKGKLQPTANKNDGLFEVKETLNEKTQWSGTQTLITPKGRETFRLLFI*	common_virus_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0016	shell	direct	high	755	0.999	GCA_011714835.1_01004
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	11136	11384	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	11137	11385	GCA_011714835_1_21_17	GCA_011714835_1_21_17	-	25993	.	.	hypothetical protein	MAKIELLDSYEDLLNYVEEIRESMDLIHNWLAKEPNWDSQCDLYEFIAQHSSQFAVLNLIMYRLDSLKDEHRSIIDNYIKGV*	.	hypothetical_protein	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0017	cloud	direct	high	248	0.996	GCA_011714835.1_01005
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	11504	11680	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	11505	11681	GCA_011714835_1_21_18	GCA_011714835_1_21_18	-	25993	.	PFAM:PF03869.13	transcriptional-repressor	MVAKVGRPKSENPRRNNTRLRMTDEEVAMLEYCAEQTGKTKTEILMLGLEKVYNEIKK*	phrogs_hmm	hypothetical_protein	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0018	cloud	direct	high	176	0.994	GCA_011714835.1_01006
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	11804	11989	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	11805	11990	GCA_011714835_1_21_19	GCA_011714835_1_21_19	-	25993	.	.	hypothetical protein	MEVMAVPSKELLIFYNQIDEWVDQVYPDKDMPRVSFKKNTPKSVLDLFDAIKLKIGFDYAV*	.	hypothetical_protein	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0019	cloud	direct	high	185	0.995	GCA_011714835.1_01007
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	11980	13638	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	11981	13639	GCA_011714835_1_21_20	GCA_011714835_1_21_20	-	25993	.	PFAM:PF06152.10	minor-capsid-protein	MDKAEKQADQFDKVYQEAKTYLDKEVNKIFDKFQRDYGLSQVDARQVLKNMKDKKNLNELRKVLEARPNAPNIQRLLADLDSPAYSFRMKRLERLSDDLDRMRESIYHSEKTGSDAFYSDLMKDSYYKATFDLQQQTGLAYGFSGLPESEIKHLQSFSWVGDGSTYSTNIWKNTGKLTSSIKDELLMSLMTGRGTRETAQAIAERFDVGQNDARRLVRTESAFFHNQMELLSYEEADIEKYIFVAVLDKRTSHICQEHDNKVYDRDKATPGVNCPPMHPWCRSTTVAYDEDADYSKLKRRARNPETGKTELVPADMTYKEWYSKYVAKDGEKVYNQGMSSIDLMAKQQSFVVGNDIRVNTKKLSGTEFDFWTQNNSKKIRDTVANVQEAFRQLPDYSKPTVVFLKKSKLPGLAGYDYKQDILFISDALSSEKEFKDILSDGFFAAKDIKDAIVHELTHKQHWDSAKAFYKANKKRYNSIEQAMMELNSGLIAYVKQQQSLDRSYLKDISLNAYNAFLYHNNINELVAEIGVIGDNVTDKVLLKKVKEVLKWK*	hallmark_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0020	cloud	direct	high	1658	0.999	GCA_011714835.1_01008
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	13601	14038	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	13602	14039	GCA_011714835_1_21_21	GCA_011714835_1_21_21	-	25993	.	PDB:5A20_A	Portal-Protein	MGLEMITKTKEANYKRGLRQRIAIFAHYLGMKQIALESHSIVPQFSRGLPKNLLEISQIVNNLEGKVTNRQLISLLPFVEDPDAELEALEEEKKKNMEDMSMFNKDNTKPEDEVEDEESGVLGEEESQSDLPADGQGRKAGRPVR*	hallmark_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0021	shell	direct	high	437	0.998	GCA_011714835.1_01009
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	14268	14801	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	14269	14802	GCA_011714835_1_21_22	GCA_011714835_1_21_22	-	25993	.	PFAM:PF05551.10	homing-endonuclease	MIKDKMHKHLNQVYYSMLARCYDEKHWAYKWYGKRGIGVSDEFSDVAKFRSWAMQNGVEFGLQLDRIDNDKDYSPSNCRWVPEHTNKRNRSDNVKYKGYILRDYLKKLSEENNISFSTLVYRYYRSIKRDDIIVNDETIDDILLNYKKYDLRQFSKGVDMSGKTIVRDEKGRFVTYY*	common_virus_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0022	shell	direct	high	533	0.998	GCA_011714835.1_01010
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	14930	15949	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	14931	15950	GCA_011714835_1_21_23	GCA_011714835_1_21_23	-	25993	.	PDB:5A20_A	Portal-Protein	MYQYLTYPRDGYDEGSLKKDLIYKLITIHNTESSHLKKLKSYYLGEHAILEHTRRNVNAPNYKTVANHAKDIADTATGYFMGNPIKYNNTADGDIDELLTAFDGAEIDQVDAQNALNMAIYGRAYEYIYAKEGMTELDSTSIDPENTFMVYDDSIERKPLFAVYYYEVKDDTKDTTKYQAEVFTENLHYHMVLRSTDSGTTQNEQVTPHNLGQIPIIEYRNNHFAIGDYEQQISLIDAYNSLMGNRVNDKEQAVESILVLYGTQLADTPEDAKVAMKILSEEGLLELPGDSARAEFLKNTLDESATEILRTALKEDIYTFSHVPNLTDENFAGNTSGVK*	hallmark_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0023	shell	direct	high	1019	0.999	GCA_011714835.1_01011
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	15961	17259	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	15962	17260	GCA_011714835_1_21_24	GCA_011714835_1_21_24	-	25993	.	CDD:COG1783	Large-Terminase	MSQTYQIKQNDIVVDLPKTVGIGYGQFWRSRNLYRVVKGSRGSKKSKTTALNFVVRLLKYPWANLLVIRRYSNTNKQSTYTDFKWACNVLGVTHLFKFNESLPEITIKATGQKILFRGLDDELKITSITVDVGSLCWAWFEEAYQIETEDKFSTVVESIRGSLDVPDFFKQITVTFNPWNERHWLKRVFFDEETRRADTFATTTTYKCNEWLDEVDIKRYEDLYHTNPRRARIVCDGEWGVAEGLIYENVTVKEFNKDELLQDSANKLCIGLDFGFTHDPTALCCSLINDTTKEIYVFDEAYKVGLITKAVAKMIKDKGYHRSQIIADSAELRLIEELRSEHGITRIKESRKGKDSIMAGVSKLQGYAIYVHPDCKNIMDEFYSYCYQQDKEGNWLNKPEDKNNHLMDALRYSLQCIEGGKATVRRRSDYGL*	hallmark_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0024	shell	direct	high	1298	0.999	GCA_011714835.1_01012
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	17237	17710	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	17238	17711	GCA_011714835_1_21_25	GCA_011714835_1_21_25	-	25993	.	PFAM:PF03592.15	Terminase-small-subunit	MNERQRRFADEYIISGNAYQSALKAGYSEKYAKARSSELLDNVGISDYIKNRMEELQDEKILTQKQILVMLSEIASGQAKETTVVTTKVAELMTDPVTGKSVKVYNEIPQLVEYPTKNSDRNKALELLGKRHKMWTDKVEADVSGTVVFANESDIPD*	hallmark_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0025	shell	direct	high	473	0.998	GCA_011714835.1_01013
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	18205	18651	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	18206	18652	GCA_011714835_1_21_26	GCA_011714835_1_21_26	-	25993	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MRLLKSVDVQFTKKNVYDVLESYRSYVRMAGAEYLPKITTTYSFEPKTFTGKNTATENMVIEHVDAEAEVLEIERAVNCIMDPYVRQVITKKYMDMKIQLSDKAIYMDLGYSESEFYRMLSRGALEFAEAYRKGKLIVFRKFLGDICK*	mmseqs_cdd	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0026	shell	direct	high	446	0.998	GCA_011714835.1_01014
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	18781	18996	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	18782	18997	GCA_011714835_1_21_27	GCA_011714835_1_21_27	+	25993	.	PFAM:PF04014.17	transcriptional-regulator	MNTVKTRKVGNSVTVTIPKTLNVPEGQEMFVYKGVDNVIVLAPKIPDPFSGDADLRMEDDFEGVKFLDSEI*	phrogs_hmm	hypothetical_protein	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0027	shell	direct	high	215	0.995	GCA_011714835.1_01015
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	18980	19333	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	18981	19334	GCA_011714835_1_21_28	GCA_011714835_1_21_28	+	25993	.	COG2337	mRNA-degrading endonuclease, toxin component of the MazEF toxin-antitoxin module [Defense mechanisms]. 	MTAKYDYIPEKQDIIWIDFDPSVGREIQKRRPAIVVSRREYSERTGFVAVCPITHGQSRLEEQGLLVPVRSNKVDGSVNPLQLYTFDFRERKAQKITTMDTTSFQKVVQLYNFIFEA*	mmseqs_cdd	nonviral_gene	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0028	shell	direct	high	353	0.997	GCA_011714835.1_01016
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	19354	19590	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	19355	19591	GCA_011714835_1_21_29	GCA_011714835_1_21_29	-	25993	.	PFAM:PF11753.7	nucelotide-kinase	MNPEIIDNINKPSHYQGANGLEAIDVVHNFVGSLSGASAFFWGNAIKYMLRFQKKNGLEDLKKARKNLDWLIEELEKN*	common_virus_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0029	shell	direct	high	236	0.996	GCA_011714835.1_01017
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	19587	20009	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	19588	20010	GCA_011714835_1_21_30	GCA_011714835_1_21_30	-	25993	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MTPKFRVWDSVEKKFVEHFFITDNGLICNMEKPTSDSKLLIPIEKSELILMQSTGLKDKNGVEIFEEDVVSRNSGMPSVVKFGKWIYEEDFGYKIKNIGFHLNSSYDDEWFQAMDYEDIRKNYEVIGNIYENPELLEDKE*	mmseqs_cdd	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0030	shell	direct	high	422	0.998	GCA_011714835.1_01018
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	20006	20497	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	20007	20498	GCA_011714835_1_21_31	GCA_011714835_1_21_31	-	25993	.	PFAM:PF03819.16	MazG-like-pyrophosphatase	MNTLEKVKQWFIDRDLENGGRLDKQSLKLSEEFGELCAGYLKKNEKLTKDSIGDCAVVIVGLGLLSKVDLDSIFEESKNVRKNDIMTSFAYANTCISNIQTEQHLKLMTLRIKSLTLLIGHLKSISKSLGYDFEECFELAYQEIKDRKGRWIDGSFVKEEDLA*	phrogs_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0031	shell	direct	high	491	0.998	GCA_011714835.1_01019
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	20494	20754	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	20495	20755	GCA_011714835_1_21_32	GCA_011714835_1_21_32	-	25993	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MKRFISIWILLSAGLNIWQMDRIAELEKKKPMVIYKADNAGAEIFGKVVEKGRHGKLYTLTIRDYGIFVVTKDVYEKIRVGDEVLL*	mmseqs_cdd	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0032	persistent	direct	high	260	0.996	GCA_011714835.1_01020
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	20751	20939	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	20752	20940	GCA_011714835_1_21_33	GCA_011714835_1_21_33	-	25993	.	.	hypothetical protein	MNYDKQVVIEGLKRTIEQNEEKIIEYSKPCDARKRRIRALERDLLKKKNKELRRKVKEEVAD*	.	hypothetical_protein	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0033	persistent	ambiguous	low	13	0.069	GCA_011714835.1_01021
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	20926	21093	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	20927	21094	GCA_011714835_1_21_34	GCA_011714835_1_21_34	-	25993	.	.	hypothetical protein	MIGVTYQEIHLFVEFLKKQYGQGRPDYIEALNDLDGMVEVSYREAIERFLDDELR*	.	hypothetical_protein	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0034	persistent	direct	high	167	0.994	GCA_011714835.1_01021
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	21109	21534	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	21110	21535	GCA_011714835_1_21_35	GCA_011714835_1_21_35	-	25993	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MKERLILKFELNRKQMINSNDRPHFHQKAKITKFLRQLAAYEGDNVLRDYFGLPYSEDKPCKVKVRIYPPTNRKYDPPNWSPTSKALFDGLTDAKIWTDDNYNVIVSTEFMHGGKSGNKNYRIELEIYEYHEILQRIVDGI*	common_virus_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0035	shell	direct	high	425	0.998	GCA_011714835.1_01022
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	21512	21874	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	21513	21875	GCA_011714835_1_21_36	GCA_011714835_1_21_36	-	25993	.	PDB:2FJR_A	Repressor-protein-CI	MNRLKELRQEKKLSQKEIAKEMSISEKTLSRWENGESQIKPEKAKQLADYFGVSVGYLLGYESNPLERLESLVDELKEHKDLLGVLDWYTVFDLANDILAIASVEKARCLGRLNEGEIDP*	common_virus_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0036	shell	direct	high	362	0.997	GCA_011714835.1_01023
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	22092	23117	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	22093	23118	GCA_011714835_1_21_37	GCA_011714835_1_21_37	-	25993	.	PF07083.11	Protein of unknown function (DUF1351)	MQELQVSVTQAQVEILDRELFEQNIKEVVTKYQNYTVTASTIKDDKQVLADLRKLFKQISDERIKIKKVLSKTADDFNEYITEQVEPLDGVIKKIAKDVKEFEDHQKALRLDTVKGYITNKASEYMLDPRLFDEKALEYVKAGDFMADGVTLKKATMKSLDDMVTFEFQKQEEYKKTISAISGQCAEYGMTDQPYIRMLKDMTLVEVLEQIKADYAFEKQKEEVRLAQERAEREREEVLAQQQEKAPKSTETAKFDPETGEILDSRQLSQNQQEAVRGAENGLKRYTQKMTLEVYFADTEEKDYFKNSLADLGFEYKKNYTVQGYQRIEPLTQAELDELIK*	hhsuite_tools	hypothetical_protein	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0037	shell	direct	high	1025	0.999	GCA_011714835.1_01024
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	23119	23868	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	23120	23869	GCA_011714835_1_21_38	GCA_011714835_1_21_38	-	25993	.	PFAM:PF03837.13	RecT-protein	MTNNQLATQTKRDITIDPSSLTGADIKKYFDPQNLLTEKQIGQALALCKGRNLNPFANEVYIVAYKNRNGGTEFSLIVSKEAFLKRAAQCKDYEGFEAGVVAADSEGVMHERKGAIMLPGDTLIGGWARVYRKNFKVPVEIFVSREEYDKKQSTWNSMPATMIRKTALVNALREAFPEDLGNMYTEDDGGETFDRIKDVTPQESREDVVTRKMAQIEQFNKEQEANHPVPEPTQVEKTVQGELLEEMEY*	common_virus_hmm	common_virus	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0038	shell	direct	high	749	0.999	GCA_011714835.1_01025
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	23865	24044	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	23866	24045	GCA_011714835_1_21_39	GCA_011714835_1_21_39	-	25993	.	.	hypothetical protein	MIQELHEEIDKWRAKYMHLGIELGEIINDQQDIILKLQNENRHLKRENWNLKKTKGRRK*	.	hypothetical_protein	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0039	shell	direct	high	179	0.994	GCA_011714835.1_01026
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	24150	24293	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	24151	24294	GCA_011714835_1_21_40	GCA_011714835_1_21_40	-	25993	.	.	hypothetical protein	MTRIELENRVWLLANHEEKNELLDLGLTSKARYVKRVLELGKVYAHV*	.	hypothetical_protein	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0040	shell	direct	high	143	0.993	GCA_011714835.1_01028
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	24310	24657	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	24311	24658	GCA_011714835_1_21_41	GCA_011714835_1_21_41	-	25993	.	.	hypothetical protein	MFEPPLVSQLLGTGAVILGFIGAGLLAHQMDKQEEEKIRQKEEERREEQEFASMIIQGYNQAYERGREAQRQEIRKNIRREFKGFTYDNEPPQGLRPEPLALPEPRRSRYEKYLG*	.	hypothetical_protein	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0041	shell	direct	high	347	0.997	GCA_011714835.1_01029
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	24657	24914	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	24658	24915	GCA_011714835_1_21_42	GCA_011714835_1_21_42	-	25993	.	.	hypothetical protein	MINKDQIIKAQQEKIERIEQLQKKLHKLSTLGLLTTKLLGLPNELEKPLKVTHDISHVIKDVLDGMSPSEAIKQNMAEEDDEEEE*	.	hypothetical_protein	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0042	shell	direct	high	257	0.996	GCA_011714835.1_01030
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	25002	25268	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	25003	25269	GCA_011714835_1_21_43	GCA_011714835_1_21_43	-	25993	.	.	hypothetical protein	METVQIVRIKDVIIEKISANDEELEHIFGCSKRQAGDMRREMKKLPSQQKYLRNDGQLVTIKGFDAYLQYRGSQSWKKEMSKTVKMTR*	.	hypothetical_protein	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0043	shell	direct	high	266	0.996	GCA_011714835.1_01031
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	25387	25626	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	25388	25627	GCA_011714835_1_21_44	GCA_011714835_1_21_44	+	25993	.	.	hypothetical protein	MTEIHACLCGNWVNLSADDDCVMGPNMASPYIWWEENAELYSPISKPEANSMYHQDYIYIHYRGADYRIHPMFIQIVSR*	.	hypothetical_protein	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0044	shell	direct	high	239	0.996	GCA_011714835.1_01032
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	25619	25789	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	25620	25790	GCA_011714835_1_21_45	GCA_011714835_1_21_45	-	25993	.	.	hypothetical protein	MKEAVKEFLKFRSRFTKIEWFEINQAIEARLNQKADQLKLDDLDLEIISSRLEKVI*	.	hypothetical_protein	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0045	shell	direct	high	170	0.994	GCA_011714835.1_01033
GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote	cenote	CDS	25786	25929	GCA_011714835.1	RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835.1_RXXS01000029.1	GCA_011714835.1|RXXS01000029.1	GCA_011714835_1_21	GCA_011714835_1_21@C0	25787	25930	GCA_011714835_1_21_46	GCA_011714835_1_21_46	-	25993	.	.	hypothetical protein	MEDKIIELADYFISESTTYREVKIACEKLLKQVSHEIELRAMESRTV*	.	hypothetical_protein	C0	25994.0	0	25994	GCA_011714835.1|RXXS01000029.1@region_1_25994@tool_cenote_CDS_0046	persistent	direct	high	143	0.993	GCA_011714835.1_01034
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	2	1225	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	3	1226	GCA_011714835_1_24_1	GCA_011714835_1_24_1	-	24346	.	PDB:3GUD_A	Neck-appendage-protein	MIYLTEGNRPLNEAYNDEIVHFGNNTYQLTFRFPTSDPKWELLKEETFLTADDLHGEQDFYIFEVEKQQGYIQVYANQVISLLNNYIVSSIEVDRVSGTRVLSAFAGSITRANPFSFFSDIDDRHTLNIKDKNAMEVLAKDKHSILGQWGGDMVRNGYNLRLLKNGGSENESLFMYKKNLSSYQHKTSTKSLKTRITFKTTVKGEGEKAVDHDYMVVIDSPLLGNYSQIYEDVVEVNDQDVTDEASLIAYGKQYFRTSMCDMLEDNLEISVVGQSDVAVQMFDVVSIYHEWYGLDVRKKITKYTYSPMAKRLKSIGFGTFQSSLANAIGGIVNDAVLNESRNLHQIFEERLKKEIANADRAFDAEFTKREKAITDAIELAKAKAEEVKQEVSDTINQRFNSFHDEPLR	hallmark_hmm	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0001	persistent	ambiguous	low	3	0.002	GCA_011714835.1_01228
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	1222	1920	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	1223	1921	GCA_011714835_1_24_2	GCA_011714835_1_24_2	-	24346	.	PDB:2X8K_A	Distal-Tail-Protein	MFYMIINGFNTSTIPHCVVTDFGQVEAAKPRVVEDANLYGANGSYRVLDGGYESYERTFSFYIPKLLDVSTIVEKFQPKDNVLEFSYQLGSVFYADFIGAKYKPHGMHAWKLELKLSMQPFRYQKNLAPLIFTASGNINNPGSVYSEPVIEIEGDGDISLTIGRTTMNLTVRRKVTIDCRHKKQNIYNADGAVQNTLRKRGGFFELAVGNNGLVFTGAVRKVTVRPNWRYIL*	hallmark_hmm	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0002	persistent	direct	high	698	0.999	GCA_011714835.1_01228
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	1920	6095	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	1921	6096	GCA_011714835_1_24_3	GCA_011714835_1_24_3	-	24346	.	PFAM:PF10145.8	minor-tail-protein	MASGTPLGQMYIELGLDVSKFSPTLTGAKNAVKYFQNNVRSLDSTLKGNEKNASLLQAKYKTLGQAIDSQRKVLDEMKKSFDKLEPGTAKFDKAAADIQRENAKLAVMEGQLRGVEKALQDVGRENSWSGKMDTLSENFAKGGEKLRAMGDAMKPVSAALLAGFTLSTKKAIDFESQMNTTKSLLADTIPTADELNSTTQKLGESSKNWAKQYGISTASINEGMQEIIKKGFDANQTIEAMPAILDAAKASGEDFNTVMNATTNILQQFGLSTQDTERVTNSLTFVANKTAAGFADMGAAMEYVGPVAKNVGMNLEETAAAVGLLSNNGIAGEKAGTALRGALTRLLKPSEQNANAMEKLGFSAEEFRSGAIKLPDILDRIKKNTEGMTDAQKSALIATAFGTEAQTAMNILVDQGGDALRNLANETKGATTYTKDLANELSKSSKNGVERFKSSLEVLQINIGQKLLPLLTPVIDKVNQFIDWLSKAPPAVQSLAVGIGGFLALGYPLLNFLGNGATALSILIKHAGKLEGLLKGGLGLAKLTERAGKLKGLLQGGLGLAKVGSEATVLAEGAGAAASSSSLLSGAIGALTNPIGLLVGGAALLAGGLVYLGYKKDEARIKAEEFGSQLSDTARKELRDFQSKVDDTSTAVANFGTHAGDAEKVSEAFRKLHEEVAAGAEKANQRMEELAKKLGFSDEEIAKMKVKNDQVVSNTDAMANQVSEIYKRHNGDASKFSQEEKEIVLNNQREMIKDRIEMMELSGEQQKAALQALNGEIGSLNETQLKHTRDVLKKALDEENQLYKTSKDGLKQLLDAKRIDQETYNKKIQELETNHQQTMEALGTKYYQVMQNLDAKVKARTGQSWNYWEEAKKVLEEYGLSYEVIGQKAAEASQKMGDSHSILAKYTSDMSKETREANDAWSLLVGNIDENNNFVIKSNVKEVIGEATKSAEGWEQLQFIVKNANINSNARVTIAEALVESGKWSTMTLEEKQLIVQNQAGLQAIFDSENHLRIWNSMPAEVKQLLLENTDVMNKAEEASKALYNYDALTPKQKELLATDENFRKAVARSTDTLTTWNAITPFTKDLKLDPTNVLNNGQLSIDKIMAWNLSNPENKSLNATDNTSEAVASAKASVNSPKQEKPIDLLAKDQTAGVRNETSAAINAIKQHNPVDILAKNSTSSTVSEVKSVVNSIQDKTVTISARDNASGVLAGIRSWITRVTGDFFTNVFASRHAHGTNYHPGGLAMVNDQRNSTYKELVILPDGRSFIPEGRDVLLPLPKGAKVLRADKTKRLMREMGVPKYAAGVGIPSDAKFLREMEEAQAKIVVQTKGDTNSKDSDKVVSEIAILRASMEKILTAILEKPSDTYLDADKISMSVYQRQGAIYAREGM*	hallmark_hmm	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0003	shell	direct	high	4175	1.0	GCA_011714835.1_01229
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	6152	6382	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	6153	6383	GCA_011714835_1_24_4	GCA_011714835_1_24_4	-	24346	.	.	hypothetical protein	MSRKEKACRRYWFWFTIFILYLAFGLYCICTNFVDIFGMLLLSPFIFASLPLYAYLFLGMFIWAFMNMAMDDFYKE*	.	hypothetical_protein	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0004	shell	direct	high	230	0.996	GCA_011714835.1_01230
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	6631	6924	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	6632	6925	GCA_011714835_1_24_5	GCA_011714835_1_24_5	-	24346	.	.	hypothetical protein	MAKVQFTIKNDKGEDVLKKSKEITTRDYRDYLVMNESLTSDLSEVEKLDKQLGFIASLFDDVTVEQLLEYTDFAKVISIFTAIYAHLVGDVDPKEKS*	.	hypothetical_protein	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0005	shell	direct	high	293	0.997	GCA_011714835.1_01232
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	6970	7566	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	6971	7567	GCA_011714835_1_24_6	GCA_011714835_1_24_6	-	24346	.	PFAM:PF04630.11	major-tail-protein	MTVKGTALIGLKSVTIRVHDGQTPTVGQNLFTLEGKDNEGATQTARVTGLSSDPVKTYGSNVAYHVSNRGVGDVKVEMGLLDVPLALYTNALGYGDDDGIYYFGADTVAKNVSILIESNTADGEPVYYGFYKGQLSMDAIDFETLKDKANELATTSVNFTATASSDVATKGRYGAIVYGSDAEKLKKLKGQLNITAAG*	hallmark_hmm	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0006	shell	direct	high	596	0.998	GCA_011714835.1_01233
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	7583	7963	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	7584	7964	GCA_011714835_1_24_7	GCA_011714835_1_24_7	-	24346	.	PFAM:PF05657.10	tail-component	MIKDKLTELYDALEEDESLSGISIKSFERPESLGDGETSIVIIPVGPPMQTAHGSNTSLAKTFLYQINVESTNRVECKELQGRIEKIMEEQGFYQTEGGLEQWIPDIKRYVDVRTYRGMSALYEKY*	hallmark_hmm	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0007	shell	direct	high	380	0.997	GCA_011714835.1_01234
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	7963	8361	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	7964	8362	GCA_011714835_1_24_8	GCA_011714835_1_24_8	-	24346	.	PFAM:PF04883.11	tail-component	MSSGANLKGFDDILRNIEARLGEPVVRRKVNRALKETVEEFEPTFKRAMAVYADTGKTVGAVVHGNVTGTSSGVPMVKLGFKSPRWTIIHLNEFGYAKNGHPRGFGVMRRFFEASKPVFKSKVGMKLKQEFL*	hallmark_hmm	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0008	shell	direct	high	398	0.997	GCA_011714835.1_01235
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	8354	8743	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	8355	8744	GCA_011714835_1_24_9	GCA_011714835_1_24_9	-	24346	.	PDB:2KZ4_A	head-closure-knob	MKRSEGPSYRYKKPESQNGDLRTPLTFYTSKIKKGVDGRDVSYEKAFYTMGQTYSPSMKDVEIATGKAMKAKMTLKIRDPLTDYQPENRHFVEVGDIRLVGKKWQIIDVRPDFANRDFLIVLIGGGRDV*	hallmark_hmm	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0009	shell	direct	high	389	0.997	GCA_011714835.1_01236
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	8730	8918	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	8731	8919	GCA_011714835_1_24_10	GCA_011714835_1_24_10	-	24346	.	.	hypothetical protein	MIKVLKEFYDLKEGVLRQVGERFEATEERFAELKEHLPDYVELEKSSRSRSSKEVVSVNEEE*	.	hypothetical_protein	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0010	shell	direct	high	188	0.995	GCA_011714835.1_01237
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	8911	9201	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	8912	9202	GCA_011714835_1_24_11	GCA_011714835_1_24_11	-	24346	.	CDD:cd08054	Head-Tail-Connector-Protein	MEIEAKLHSLLIPFKERMRIFHSGEDANLSRMLESSQMVITRLVGSGNIHDHQIRELILERARYVYNDQVEFFYENFKADILALSLDKIEMEDSDD*	hallmark_hmm	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0011	shell	direct	high	290	0.997	GCA_011714835.1_01238
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	9215	10330	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	9216	10331	GCA_011714835_1_24_12	GCA_011714835_1_24_12	-	24346	.	PFAM:PF06673.10	Major-Capsid-protein	MMKLGNEFTTARQNFMNAVETGAPMEEQNKLYNEMIEALTDKLQDDAREAARKEIATMNPYDAQLTAEAREFFNNIEKLPPKGIEKLFPQETIDRIFEDMVAARPLLQHIGLRNAGIRLKFLKSSRTGQAIWGKINAEIQGQLKQEFAEEEAIQSKLTAFVVIPKDSEKFGPAWLQSYVSIQITEAFAAALEAGYLNGDGDNKPIGLSRTLTGTAESEKVTYAEKQAQKKPLTFADSATVVKELTEVYKYHSTKADNTTPVAVEGNLVMVVNPVDAWDVKKQYTSLNAQGVYVTAMPYNLILVESVAQASGKVTTFVKGRYDAFVGGGIEFGRFTETYALEDLNLYTAKQFAYGKAHDEKTAAVWTLNIGE*	hallmark_hmm	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0012	shell	direct	high	1115	0.999	GCA_011714835.1_01239
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	10349	11071	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	10350	11072	GCA_011714835_1_24_13	GCA_011714835_1_24_13	-	24346	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MTIIQIKGAIVSNDDRWFYDWIDMDATAPKDIVLPTTGEDVEVHINSGGGDVYAGSEIYTALRAYQGHVTVKIVGIAASAASVIAMAGDQVEISPTAQIMIHNVSAGVRGDHKALLHEAGVLEGFNKSIAYAYIDKTGKALDDLLDLMEGETWFDARSAVNHGFADKVMFESQEAPVLVASQTPVIPRDFIEKIRSAMTPDVELLADLVRDRLNNSLPIPEDKKKEDKTAEPVGLGRFPF*	common_virus_hmm	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0013	shell	direct	high	722	0.999	GCA_011714835.1_01240
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	11052	12200	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	11053	12201	GCA_011714835_1_24_14	GCA_011714835_1_24_14	-	24346	.	PFAM:PF04860.11	Portal-protein	MGFLNLFKRDAPDVGFDFEELERMLGCLQLKSLAIDKSAEFVARIFAKSEFRYMVENHHVTSDWDYILNVRPNKNESASEFWQKVIYRLLTKNEVLIVLSDDKQLLVADAFTRRRYALYDDTFEMVSVGDYTFQRKFAMSDVIFLQYNNNRLQEYVSDLFSDYEKLHTRLVEALARNNQIRGVLATKANGTFDEDKRKKLQRYADNLFKSFTSKTVAIVPTMDGVEYSELTNTVGTTNLSVEELKKLRRQFDDEVADILGLPTALMHGDMADLSNSQKMFNSYCYESLVKKVGDALNHAMVSSAGYANQKKFVIFGEGGLDKFALAENIDKLISSGAMTRNEVRLELGLEAVPGGDSFLITKNYQGENEIEKGGNEDDNHSD*	hallmark_hmm	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0014	shell	direct	high	1148	0.999	GCA_011714835.1_01241
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	12256	13896	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	12257	13897	GCA_011714835_1_24_15	GCA_011714835_1_24_15	-	24346	.	PFAM:PF03354.14	Large-Terminase	MISHPLVDDYIKMAENGEVVVNKERKLLFKIIKEKIYPRDDLYFDNDLIDKFIRFAEKNFFPLAKYQLFLTPFIFLFRKVDEEPHFDEYLYTLARGGGKNGFMSARSSFFISPIYPIRDYDVTITANSEKQGKVSFEEVYETIQRRGLEDHFYLTKMSITGRANNSVFSFRTNNPKTMDSARDGCLEFDEIHQFENDKAVKVQRSGLGKIAHVRTFYNGTNGYVREGFYDKLIEKSMQILNGEVDDFRLFPFICKLDSADEVDDMKNWPKANPMLDESTPYAKRLLARTKADYDDLELEPSGRQEFMTKRMNLPEADLEKDVTTRERLLACLRSPGIDLLGKSCVAGFDYASIRDFASVGLLFKNGDEFIWKQHSFARKAFLKAFKLKAPIQEWADRGLFTIVDGPSIDPRLLVEKLNEWSKFYQIELVCADGFRMDLLKPLLEEAGFEYEFLRNPGAIQSKVAPIIEDGFANERFIFENDNSMIWYTDNTYVKEDKDGNKRFLKKEPVRRKTDGFHALIAALYKRELVHESNVGEFLDMLEDWEF*	hallmark_hmm	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0015	shell	direct	high	1640	0.999	GCA_011714835.1_01242
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	13893	14231	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	13894	14232	GCA_011714835_1_24_16	GCA_011714835_1_24_16	-	24346	.	PFAM:PF05119.11	Small-Terminase	MEEYSEKNIKELENQLLSKIGYFSPRKKDAIQYEKVNRYLYLVRLLYELKAKLHEDGLVITVHNGQQRFQKANSLIKEINTTSNQLLAIERSFDFDVENSLVEKATSGSDLL*	hallmark_hmm	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0016	shell	direct	high	338	0.997	GCA_011714835.1_01243
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	14350	14646	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	14351	14647	GCA_011714835_1_24_17	GCA_011714835_1_24_17	-	24346	.	PDB:5H0M_A	HNH-endonuclease	MIEVSTREERNQFYNSSEWRTIRRQALKRDHYECVWCRDEGKVTTTNLEVDHIKELEFYPEFALDIDNLRTLCKACHNKRHDRFDKNDRNFRKDEWWG*	common_virus_hmm	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0017	.	unmatched_CDS	none	0	0	.
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	14860	15402	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	14861	15403	GCA_011714835_1_24_18	GCA_011714835_1_24_18	-	24346	.	CDD:cd01192	site-specific-tyrosine-recombinase	MNIVEPIRDKDDIQAMKDYLREWNERNYILFLFGINSGLRVGDILKIRVKDVQGWYIKLKEQKTGKKKKIKMTKTLKREVREYIQNKPHHHFLFQSRVGKNKPLDRRTVDWILKVAASECGIENIGTHSMRKTFGYHYYKKTKDIAMLMSLFNHSSPAITLRYIGIRQDQQDKAMSNFGL*	common_virus_hmm	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0018	shell	direct	high	542	0.998	GCA_011714835.1_01244
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	15702	16130	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	15703	16131	GCA_011714835_1_24_19	GCA_011714835_1_24_19	-	24346	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MQIELLDIIDEKKTRKEAIKVLKKYSRLRRIAGEEYAPKITISYSLEPRSSSGQTSKQVESMVLRRVSAQQDLELIAKAINNLSDMEYTRILIERYCRKKRREDYSIYSELGYSSSEYYRILNKALLEFAESYQASNLLVYK*	mmseqs_cdd	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0019	persistent	direct	high	428	0.998	GCA_011714835.1_01245
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	16201	16431	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	16202	16432	GCA_011714835_1_24_20	GCA_011714835_1_24_20	-	24346	.	PDB:2FJR_A	Repressor-protein-CI	MKDKLNPRQASRFAFLLKQKRKERKLSQEKLAAKLGYSRYLIAQWEKDESVPNIYNVEDICTYFAFPADIILGSRA*	common_virus_hmm	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0020	shell	direct	high	230	0.996	GCA_011714835.1_01246
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	16421	16600	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	16422	16601	GCA_011714835_1_24_21	GCA_011714835_1_24_21	-	24346	.	PFAM:PF04936.11	host-nuclease-inhibitor	MSEYALYDGDTFITMGTLAEISKETGIAERMLKYYTFASTQRRNPNGRAVVKIEVDDEG*	phrogs_hmm	hypothetical_protein	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0021	shell	direct	high	179	0.994	GCA_011714835.1_01247
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	16593	16817	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	16594	16818	GCA_011714835_1_24_22	GCA_011714835_1_24_22	-	24346	.	PFAM:PF11753.7	nucelotide-kinase	MTDNINKPSHYQGANGLEAIDVVHNFVGILSGASAFFWGNAIKYMLRFQKKNGLEDLKKARKNLDWLIEEMEHE*	common_virus_hmm	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0022	shell	direct	high	224	0.996	GCA_011714835.1_01248
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	16819	17343	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	16820	17344	GCA_011714835_1_24_23	GCA_011714835_1_24_23	-	24346	.	PFAM:PF13921.5	transcriptional-regulator,-D5-like	MAGRRWTEDEVDYLEWYVLSREEHDLTQACKFLDRSYNAVRSKLAKLQKYNSNLQFKPKWSDADDSYILKYYQRFSYKTLARILGRSEKAIRDRIRKLGKRKILDLTIFHKDVVSLANQGIAVKDIAQKLGLHYNQVYYCLNKHQIPYKKREFRNQSNNLAWRNLNDMIFMRRT*	phrogs_hmm	hypothetical_protein	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0023	shell	direct	high	524	0.998	GCA_011714835.1_01249
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	17330	17509	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	17331	17510	GCA_011714835_1_24_24	GCA_011714835_1_24_24	-	24346	.	.	hypothetical protein	MPDVEWIMENCHMMRDNGIWAGEKQISYASPDGQYTYYVNKRKDGTYYLHGAYKHYGRT*	.	hypothetical_protein	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0024	shell	direct	high	179	0.994	GCA_011714835.1_01250
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	17502	17909	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	17503	17910	GCA_011714835_1_24_25	GCA_011714835_1_24_25	-	24346	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MIPKFRAWDRLRKEMNYKVMVGNCDTDDENWTCPIIWIEEKKDWLHFDDYECIMQSTGLKDKNGKEIFEGDILEIQDEGEVLGNAKLTWDNEQAVFMIEAISVDDIAPFHEILSDESYSYRVVGNIYENKELLDA*	mmseqs_cdd	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0025	shell	direct	high	407	0.998	GCA_011714835.1_01251
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	17906	18166	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	17907	18167	GCA_011714835_1_24_26	GCA_011714835_1_24_26	-	24346	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MKRFIAIWILLSAGLNIWQMDRIRELEEKKPMVIYKADNAGAEIFGKVVEKGRHGKLYTLTIRDYGVFVVTKDVYEKVKVGDEVML*	mmseqs_cdd	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0026	persistent	direct	high	260	0.996	GCA_011714835.1_01252
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	18163	18639	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	18164	18640	GCA_011714835_1_24_27	GCA_011714835_1_24_27	-	24346	.	PFAM:PF02390.16	DNA-methyltransferase	MEDIRILDACCGSRMFWFDKNESHTIFMDIRQETFEIHDKKVNVDPDVIGDFRDMPFENNTFNLVVFDPPHLKWAGKNSIMKAQYGQLDKVTWPEDLAKGFEECMRVLKVGGTLVFKWSDCQINVKEVLKSVPFKPLFGQQRGTTHWMTFMKFKEVID*	phrogs_hmm	hypothetical_protein	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0027	shell	direct	high	476	0.998	GCA_011714835.1_01253
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	18639	19115	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	18640	19116	GCA_011714835_1_24_28	GCA_011714835_1_24_28	-	24346	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MKLNELIKKYKKLEGVWNAEGAELARQIFLQDLEQLDEPQKVKVPQFVADWIEECKKKGDLSLGGAIQLPCPEIYEWLMDWENQELFAQAWIFGYEVEEEKQYAVKIKASGQYLAKTKLKEISFMYNGACSHFTRKQLEEAGFGWVFDCLGIEIEEVE*	mmseqs_cdd	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0028	cloud	direct	high	476	0.998	GCA_011714835.1_01254
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	19105	19434	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	19106	19435	GCA_011714835_1_24_29	GCA_011714835_1_24_29	-	24346	.	.	hypothetical protein	MMEDLKQKVNEVYNWTVEDGKPKPPKQDLPQAVKDRADYFWEMTEDGMTFMGAMECIFADEKLTDYDLGATKGWLPKSKEFDDWIGYSPSMAQVVIAVYLIYGGSEDET*	.	hypothetical_protein	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0029	shell	direct	high	329	0.997	GCA_011714835.1_01255
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	19406	19738	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	19407	19739	GCA_011714835_1_24_30	GCA_011714835_1_24_30	-	24346	.	.	hypothetical protein	MKYKVTEYHSDFQEEQTGTCELCFGTAWVENGSITVEDENGTETEIYLTVWDWGDYDTIYIDNVVNFSAWLQEREVDPIVEETERWSWLHELVEKYNEELEDDGRFKAKS*	.	hypothetical_protein	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0030	shell	direct	high	332	0.997	GCA_011714835.1_01256
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	19728	19919	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	19729	19920	GCA_011714835_1_24_31	GCA_011714835_1_24_31	-	24346	.	.	hypothetical protein	MNYDKQVVIEGLKRTIEQNEEKIIEYSKPCDARKRRIRALERDLLKKKNKELRKKVEELEDEI*	.	hypothetical_protein	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0031	shell	direct	high	191	0.995	GCA_011714835.1_01257
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	19906	20073	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	19907	20074	GCA_011714835_1_24_32	GCA_011714835_1_24_32	-	24346	.	.	hypothetical protein	MVGVTYQEIHLFVEFLKKQYGQGRPDYIEALNDLDGMAEVSYREAIERFLDDELR*	.	hypothetical_protein	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0032	persistent	direct	high	167	0.994	GCA_011714835.1_01258
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	20089	20484	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	20090	20485	GCA_011714835_1_24_33	GCA_011714835_1_24_33	-	24346	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MINNVTLVGRLTKDPELKHTPSNVAVATFTLAVNRNFKGANGEREADFINCMMWRKQAELFAEWCKKGNLVGVTGRIQTRNYENQEGRRVYLTEVVADGFERLEKRDDTANRSNIEEQMPGYALEEDDFPF*	common_virus_hmm	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0033	persistent	direct	high	395	0.997	GCA_011714835.1_01259
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	20477	20578	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	20478	20579	GCA_011714835_1_24_34	GCA_011714835_1_24_34	-	24346	.	PFAM:PF00436.24	single-strand-DNA-binding-protein	MIEFIKEFGITFLCFFIGYSVVECATGKEKKDD*	phrogs_hmm	hypothetical_protein	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0034	shell	direct	high	101	0.99	GCA_011714835.1_01260
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	20575	20799	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	20576	20800	GCA_011714835_1_24_35	GCA_011714835_1_24_35	-	24346	.	.	hypothetical protein	MLNLYFVYNGHCKFYLGTFDNVDDLIEQMEDHQWAFSAITQPRFQKHIGQRTTRFDYGAKDCYYLATFFRRRRK*	.	hypothetical_protein	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0035	shell	direct	high	224	0.996	GCA_011714835.1_01261
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	20799	20993	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	20800	20994	GCA_011714835_1_24_36	GCA_011714835_1_24_36	-	24346	.	.	hypothetical protein	MFILKHGTREDKPFLRSAVIGVTGLDISCSEEKKAMRFVSRGAALQVGKALRGSFGNFYPVEVE*	.	hypothetical_protein	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0036	persistent	direct	high	194	0.995	GCA_011714835.1_01262
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	21008	21778	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	21009	21779	GCA_011714835_1_24_37	GCA_011714835_1_24_37	-	24346	.	PDB:4M4W_K	Replicative-helicase	MVDNVFEEIALSYHRNTEQQDEFCEKHNIPLIKILRTESVVCRMCESERIHEENQARVNELADAENERERKYYLEKFSLYDEVLKNATLDNFETPTEKEAEKLAFAKRICREWSEGARNNIVLQGEAGTGKSHLAFAMVKALSEYTKEIAIFINVTDLLMKIKADFSQEEFLVNKIASAKFLVLDDLGMEKDSEWSFTILYNILNKRSNTIITTNLTSADIQKRYGRPFMSRLMKGVDKDHLMVFNDLTNKRKHYF*	rep_hall_hmm	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0037	persistent	direct	high	770	0.999	GCA_011714835.1_01263
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	21772	21930	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	21773	21931	GCA_011714835_1_24_38	GCA_011714835_1_24_38	-	24346	.	.	hypothetical protein	MGVLELIEQFEIDYYPLSYEKKTLLADQPIHQVVACLSEMASWHECGGRLSW*	.	hypothetical_protein	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0038	persistent	direct	high	158	0.994	GCA_011714835.1_01264
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	21918	22748	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	21919	22749	GCA_011714835_1_24_39	GCA_011714835_1_24_39	-	24346	.	PFAM:PF09681.9	replisome-organiser	MLGMSEIKWIKITTDIFDDEKICLIDALPDPDAILVIWFKILTLAGKHNSNGLLMMTDKVHYTDEMLATIFRRPLNTVRMAIGVFEQFGMIEIIDGIISLPNWEKHQNVDGMEKIKEQTRNRVAKYRKKQKNLALGNVTGNVTGNVTVTDGNALEEDKDKNKNRLDKDKNKKRITTTTSSGGQENILELFQSEFRRLLSGFEIEEINHLLNENDVDLVKEALKTAINSGKPNIKYIGGILRNWQMNNVTTVEQVRQSEKKNKDKKEEQEAKDEWGY*	rep_hall_hmm	common_virus	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0039	persistent	direct	high	830	0.999	GCA_011714835.1_01265
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	22732	23028	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	22733	23029	GCA_011714835_1_24_40	GCA_011714835_1_24_40	-	24346	.	.	hypothetical protein	MEELIESLDNLIMIVKELEGRESTSRHFITTWENDYKNLLLVKEYLTDYKKLAKDYRDVELKNKLLKIEKMELEGRYIYEDMRMKYRANRRKWGARYV*	.	hypothetical_protein	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0040	shell	direct	high	296	0.997	GCA_011714835.1_01266
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	23044	23364	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	23045	23365	GCA_011714835_1_24_41	GCA_011714835_1_24_41	-	24346	.	.	hypothetical protein	MFEPPILDQLMGVGALLIGFAGACRHIKLQEQREEEERREEQEFASMIIQVRNHAYERGREDKWQEIRKNIRREFKGFTYDNEPPVGLRPEPLALPEPKQSAIRLL*	.	hypothetical_protein	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0041	shell	direct	high	320	0.997	GCA_011714835.1_01267
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	23375	24097	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	23376	24098	GCA_011714835_1_24_42	GCA_011714835_1_24_42	-	24346	.	.	hypothetical protein	MNNKKAYKHKMKKENRPGLRNFFERYEHEDENLKKIVQDLSNEKFNPLDKPNDYNGSFGHDFMSIMWATLLIDILKNLRKEVSSSASDLDLKLGFTKGYPMASIVNTQTKPTKKNVKILSKIFDRMHILFPEETKRARERESLDKYIDVNEILQRTLLLHGFNESANALKNYENEIDSELESDEQTETDNRIMSNIYELVISDTIIQFNEDDTVLSVLKKIKEQTNLKFEVFETLKEKVI*	.	hypothetical_protein	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0042	shell	direct	high	722	0.999	GCA_011714835.1_01268
GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote	cenote	CDS	24109	24345	GCA_011714835.1	RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835.1_RXXS01000031.1	GCA_011714835.1|RXXS01000031.1	GCA_011714835_1_24	GCA_011714835_1_24@C0	24110	24346	GCA_011714835_1_24_43	GCA_011714835_1_24_43	-	24346	.	.	hypothetical protein	TNQLLAFAEKQVKEQLENDRMPINQQALMEKFGFTHSYIKKLERKGLRFRKQGKYIMYDINDVYEILELEKEVRKLRA*	.	hypothetical_protein	C0	24347.0	0	24347	GCA_011714835.1|RXXS01000031.1@region_1_24347@tool_cenote_CDS_0043	persistent	direct	moderate	177	0.747	GCA_011714835.1_01269
GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote	cenote	CDS	2	955	GCA_011714835.1	RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835.1_RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835_1_49	GCA_011714835_1_49	3	956	GCA_011714835_1_49_1	GCA_011714835_1_49_1	-	7674	.	COG5263	Glucan-binding domain (YG repeat)  [Carbohydrate transport and metabolism]. 	MDIDTSRLRTGLPQVGVQPYRQVHAHSTGNRNSTAQNEADYHYRKNPELGFFSHVVGNGRVMQVGPVNNGSWDVGGGWNAESYAAVELIESHSTKEEFMEDYRLYIELLRNLADEAGLPKTLDTDDLAGIKTHEYCTNNQPDNHSDHVDPYPYLAKWGISREQFKQDIESGLTIETGWKKNDTGYWYVHLDGSYPKDKFEKVNGTWYYFDGSGYMLANRWKKHTDGNWYWFDQSGEMATGWKKIAEKWYYFDTEGAMKTGWVKYKDTWYYLDGKEGAMVSNAFIQSADGTGWYYLKPDGTMADKPEFTVEPDGLITTK	mmseqs_cdd	nonviral_gene	NaN	.	0	7674	GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote	cenote	CDS	958	1287	GCA_011714835.1	RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835.1_RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835_1_49	GCA_011714835_1_49	959	1288	GCA_011714835_1_49_2	GCA_011714835_1_49_2	-	7674	.	PFAM:PF09682.9	Phage-holin	MTQFNEFIIAFATGFLAVAVGSIVKMVKDYLLRKGGEKAVIIAEILAKNAVHAVEQVAQETGYKGDEKLAQARTKIRAELTKYKISMTDKDLDTFVESAVKQMNDAWRE*	common_virus_hmm	common_virus	NaN	.	0	7674	GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote_CDS_0002	persistent	direct	high	329	0.997	GCA_011714835.1_01852
GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote	cenote	CDS	1302	1619	GCA_011714835.1	RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835.1_RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835_1_49	GCA_011714835_1_49	1303	1620	GCA_011714835_1_49_3	GCA_011714835_1_49_3	-	7674	.	.	hypothetical protein	MRDRVRIMLGSREIVKRYIGDRLVWSSGPSLLLEVLNTRMWQYWGGYNIDIKGNDIKVAAIRYVQLNNSKLIRIQADMYNRGVIYLTGTNLREYIGSVNVKFYRE*	.	hypothetical_protein	NaN	.	0	7674	GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote_CDS_0003	shell	direct	high	317	0.997	GCA_011714835.1_01853
GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote	cenote	CDS	1628	2419	GCA_011714835.1	RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835.1_RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835_1_49	GCA_011714835_1_49	1629	2420	GCA_011714835_1_49_4	GCA_011714835_1_49_4	-	7674	.	6V8I_BM	Distal Tail Protein, gp58, Tail-Associated	MSAMSNLENLARAIGEDVKAIKEDSELKDREVKKRLDTLESRPKVHPETLVTKAELEEKGYLTSHQDLSTYAQKWELYNDIPIKARISALENRPSFDTLTPTQRDSLKGDNGHSLNASVRIEGSYKNGSTSRLNLFADVFYDGEAVTSGYTLDYYYRGFGYTNWRSLRNQTPDSSGKFGTWSASQRSGGWFEVRIEVNYRGLRASAFTHLDNVNDGEQGRSGVPGQNIVNQNGSQALNYWAGTQEQYDAITTKDPHTIYDIFK*	hhsuite_tools	hypothetical_protein	NaN	.	0	7674	GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote_CDS_0004	persistent	direct	high	791	0.999	GCA_011714835.1_01854
GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote	cenote	CDS	2416	2736	GCA_011714835.1	RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835.1_RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835_1_49	GCA_011714835_1_49	2417	2737	GCA_011714835_1_49_5	GCA_011714835_1_49_5	-	7674	.	PFAM:PF12789.6	tail-fiber-protein	MDTTKLTAFAQAVGEDNKKVNEELKTKVSTSDMNQAIAQAKSEVKAEILGEGTPENLDTLKEIAEKITSMGQDENSALLGKVTEVSGRVDQIANLDLVATYNAAKA*	phrogs_hmm	hypothetical_protein	NaN	.	0	7674	GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote_CDS_0005	persistent	direct	high	320	0.997	GCA_011714835.1_01855
GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote	cenote	CDS	2743	3219	GCA_011714835.1	RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835.1_RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835_1_49	GCA_011714835_1_49	2744	3220	GCA_011714835_1_49_6	GCA_011714835_1_49_6	-	7674	.	PFAM:PF14606.5	neck-protein	MVCNLNMTNLRQIDGGHLIKQGDLASTFGFALLDEDYQVISSLEGKEALISLTKEGYQWKKQVTVTGQGVSFHLDAILPIGSYRLEITAGGYVFPSDKSVHIKIVASDKELVTEEVHALKELDIAKEVEKQLAGRTVGESPVGQELPDLLFYYNLGKV*	phrogs_hmm	hypothetical_protein	NaN	.	0	7674	GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote_CDS_0006	persistent	direct	high	476	0.998	GCA_011714835.1_01856
GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote	cenote	CDS	3235	3513	GCA_011714835.1	RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835.1_RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835_1_49	GCA_011714835_1_49	3236	3514	GCA_011714835_1_49_7	GCA_011714835_1_49_7	-	7674	.	PFAM:PF04531.12	holin	MTEIEHLLIRFLFSLIPVVVLYFSMKDRATKQENRMTAIEKDIENLREFRMSANKRLDNHDEQNKAILVLAEQVKSLGEDVRELKTLIQSKQ*	phrogs_hmm	hypothetical_protein	NaN	.	0	7674	GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote_CDS_0007	persistent	direct	high	278	0.996	GCA_011714835.1_01857
GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote	cenote	CDS	3524	3676	GCA_011714835.1	RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835.1_RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835_1_49	GCA_011714835_1_49	3525	3677	GCA_011714835_1_49_8	GCA_011714835_1_49_8	-	7674	.	.	hypothetical protein	MSKITLDQAKIDMYINLLERGAVDFSWVHKRWKDRVRKELKRRGLSHLAN*	.	hypothetical_protein	NaN	.	0	7674	GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote_CDS_0008	persistent	direct	high	152	0.993	GCA_011714835.1_01858
GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote	cenote	CDS	3669	4202	GCA_011714835.1	RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835.1_RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835_1_49	GCA_011714835_1_49	3670	4203	GCA_011714835_1_49_9	GCA_011714835_1_49_9	-	7674	.	PF07104.11	Protein of unknown function (DUF1366)	MNYEVAINPYLKGGENVTVVAIKMENKGRYSYEQCELPGDHTQDSEDALIQAVLELVRTELDPTSAIVKNQEQLAKTTEALERANQLMDGMQKVNLQNAQDIEDILARLEELEAQGESDQEEAEEDTPQVTDTENQAEEAQPTPAVEDKKESEKEDDISETTNQESPSEDNGGSSNE*	hhsuite_tools	hypothetical_protein	NaN	.	0	7674	GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote_CDS_0009	persistent	direct	high	533	0.998	GCA_011714835.1_01859
GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote	cenote	CDS	4199	4405	GCA_011714835.1	RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835.1_RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835_1_49	GCA_011714835_1_49	4200	4406	GCA_011714835_1_49_10	GCA_011714835_1_49_10	-	7674	.	.	hypothetical protein	MDNHTIDKLVAESLVDRLADIELNYAHLNVHHRLALAELQAFKAVLEYDPALKELFDETQAKMKGNKE*	.	hypothetical_protein	NaN	.	0	7674	GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote_CDS_0010	shell	direct	high	206	0.995	GCA_011714835.1_01860
GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote	cenote	CDS	4398	7673	GCA_011714835.1	RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835.1_RXXS01000054.1	GCA_011714835.1|RXXS01000054.1	GCA_011714835_1_49	GCA_011714835_1_49	4399	7674	GCA_011714835_1_49_11	GCA_011714835_1_49_11	-	7674	.	PDB:3GUD_A	Neck-appendage-protein	LDSVARLEAFKSQTRSAQTALSGDLNLLKQTVTNDISSKQRQLKTDISKQVQALGQIKNDLAGVRSSQARYEETTKGRLTALTNRMEGKANKSEVRQTAETLTSQIDRIQEESSTRISTMTSRFNQRADALDAGVRRLTEGLRTKADISSLNVTAENIRQSVRRLERDTQSQLNQKLSTAEFEVQAGSIRQEILNATKDKADKTLVVTEAGKLREEFSNMQVGGRNYYRDSEKIQQSRFGFVFDNLDPYLSKSDIGTTWTLSFDCKLDEVDGSFPFHMSHGGANGFGIEGRKEFTATREWQRFRLTGPVFFKEDAPSESKLQMTLFNSDLGYGGTLFIRRIKLEKGTLATDWSPALEDTNGLITQAKASFERTAQELRTDLSAVQAYVAQDGQRQESLQRYTREESARQARAVREQISRDYVGKSSYQEDVEGIHRRIEGVKTSANREITSQIASYRQSADGTFRDISSRITTYKQDMTRNIANLSHQLAGKVETTDFQRVRESSQLYERILGNTENGIADKVARMAMTNQLFQVEVGKYSVSGPNLIKNSDFKNDTNKWVSTQNLGRLVKHSFYHNGQKDLMRLSNATKNKNFLSSHRFNLERNTDYVLNFRGFNNSALASYDVYILGRRAGESDGFTIFKKVVSSKKLSTSRCEDVSVTFNSGEMDNAYIRFENNGSSSGTADLYITEVDLYKGYKPRTWQPHPEDAVADANKKLEATQTKMTQLAGSWLVQNINSAGDLISGINLGANGHNRLSGKLTHITGETLIDRAVIKSAMVDKLKTANFESGSVTTAVLAAEAVTADKVKFDHAFIRKLIANDAFIGELTSKRIFATKIESVVNRSTFLEAYQGQIGGFTIGRFAQGRGRWISGVNQFSVGMGNGEGGSYNGENTAFWANWGYSWNSPGPNAWYVTTLGNMHCRNGANFHGRVDFSNSSRANFYGNTTFSRSPVFLNGIELGSKDVFGDGWNPKGGRNAVVWWNQVGSGSVKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIESKKHEEIGLIAQEAETIVPRIVSRDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMENRHG*	hallmark_hmm	common_virus	NaN	.	0	7674	GCA_011714835.1|RXXS01000054.1@region_1_7674@tool_cenote_CDS_0011	shell	direct	moderate	3216	0.982	GCA_011714835.1_01861