core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4577411	4578424	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	1	1014	GCA_012972105_1_1_4442	GCA_012972105_1_1_4442	-	6530396	.	COG0438	Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]. 	MPANEWRDGPGQASAAIMIHLFNGFQNPFGGSERETLDLYRLLGADQQVRLWATSSRVSGELMRQFPIRRISPATREVPDGGTYVFLGAHWRNKIWPYLIRRPRRLIYVFNTFHPKIIALTTGMPRLLGWPDAELVLISEFQKRMLQVEGVVHPSPIDIGRFSPRSARPDRPFTVGRLSRDTADKHHADDVALYEALLADGVAVRIQGGMPLKDRLAPHPQLELLPQGQFAAEQFLPTLDVFYYRTGSHVETFGRVVFEAMACGLPVVCHSHGGYADHISHGENGFLFETTQQAVQILAELKADPAMRTDVGHKARQTVERLFSPQALQQRLDFYRR*	mmseqs_cdd	common_virus	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0001	persistent	direct	moderate	963	0.95	GCA_012972105.1_04487
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4578587	4579375	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	1177	1965	GCA_012972105_1_1_4443	GCA_012972105_1_1_4443	-	6530396	.	COG2199	GGDEF domain, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants  [Signal transduction mechanisms]. 	MKLDLSPTSWGRVIAVTAAGTAFFIAVAFFVDSFNFPYLSPEAVWRAQMTDLMLPLVLGGSFLFFLMWKIRQLAIAQRDLSVIAATDSLTAVLNRGAFSMLVEAYLEQTHKQAQTRSGALLIIDADHFKSINDRLGHDCGDQALKLIAQAIKGQLRGSDIVGRIGGEEFGVFLPGVDPSQSWLVAEGIRRRIREMDFSPGGRSCPLSVSIGGTSFSGPTTYEAIFSAADRRLYAAKSNGRDQVSFDPAEAALVSQPSATTVH*	mmseqs_cdd	nonviral_gene	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0002	persistent	direct	high	788	0.999	GCA_012972105.1_04488
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4579552	4579707	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	2142	2297	GCA_012972105_1_1_4444	GCA_012972105_1_1_4444	-	6530396	.	.	hypothetical protein	MQDAEISDHEMKTFHKVAAIMGAGDGSLQLNADDLIAASFLVEASGPAPNR*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0003	persistent	direct	high	155	0.994	GCA_012972105.1_04489
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4579946	4580233	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	2536	2823	GCA_012972105_1_1_4445	GCA_012972105_1_1_4445	-	6530396	.	.	hypothetical protein	MTGGNLTLAGALHRMLKKIALAAVLFQVAVFSALITQTVLFASTATQAADVQPSEPVAVTDKECAAATWPNIPGRCLERVEARNSTVTMVLPVGQ*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0004	persistent	direct	high	287	0.997	GCA_012972105.1_04490
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4580483	4580974	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	3073	3564	GCA_012972105_1_1_4446	GCA_012972105_1_1_4446	+	6530396	.	COG1525	Endonuclease YncB, thermonuclease family [Replication, recombination and repair]. 	MIARAALLLTAATALIPLSAAAAPLVGIPSVIDGDTIEIHGQRIRLNGIDAPESAQLCLDAAGKKYRCGQKASLALADFLKAHRPTSCIEVDRDQFRRMVAVCTAGGIDIGEWMVRKGYAVDWPKYSAGFYAKAETDARTAKRGLWAGSFDRPWEWRKQMTVE*	mmseqs_cdd	nonviral_gene	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0005	persistent	direct	high	491	0.998	GCA_012972105.1_04491
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4581101	4581727	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	3691	4317	GCA_012972105_1_1_4447	GCA_012972105_1_1_4447	+	6530396	.	PF05219.12	DREV methyltransferase	MTTSLAGTLKNRGKQVAKRLLGYDSRNWLRIRQIEAFTVFLEAGNRKASDVIEISPGWNRYWRAMCPNYRSVDFPAFDICRDRTEEQYSIVIADQVLEHVQRPHVAVQNIHAMTRPGGWAMVATPFLFRVHARPHDYNRWTPAGLKQLMIEGGFAEANVKVHGWGNKACARAHIGGPVRAYGLWRDLSNDEEYPLMVWAFAKKESAAQ*	hhsuite_tools	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0006	persistent	direct	high	626	0.998	GCA_012972105.1_04492
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4581721	4582038	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	4311	4628	GCA_012972105_1_1_4448	GCA_012972105_1_1_4448	-	6530396	.	6X62_AX	DotC, DotD, Type IV secretion	MTFHKAIAAVLMTAALAGCQSQTEGQQRATTGALIGGAGGALVGQAIGGNTKSTVIGAASGALLGAVVGSATTPQRRGEEMCRYQDRYGRIYTARCDDRYYNGNY*	hhsuite_tools	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0007	persistent	direct	high	317	0.997	GCA_012972105.1_04493
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4582407	4583900	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	4997	6490	GCA_012972105_1_1_4449	GCA_012972105_1_1_4449	+	6530396	.	PDB:4BQQ_A	Integrase	MSTERQIYSIDNQRDAIRNYAEVMGYDIVATYEDPGRSGLSILGRPGLKRLIEDIESRRADFETVVVYDVSRWGRFQNTDESASYEYRCQRAGVRIEFCAELFVNDGSIGSDVLKAIKRSMAAEYSRMLSNRVFAGQSRIVKLGFSGGGPAGYGLRRLLVDGSGNPKAILHRDERKGLASDRVVLVPGPENEVSTVRWIFNQFVKKGKTAVEIASALNARRLVTEFGRPWTGACVGTILASEKYVGNIVWNRISHRLLQNRLRNPPSAFVRADNVIEPLVTRALFDRAQAIRRARTYLRPDEELLADLTKLLKERGRLSSPIIDAAPGCHSASIYAHRFGSMNAAYQLIGYDGSANYRKLDIRRRLIQIRQQTIENLMSDIDGVGGSALYDPQTKIMRVNDEFSVAIWTAQYRMNGTGFPRWPFWKRGLIGPEVTILIRMESDNQTVRDFLIAPAHEAQSALHMLKADNGVRLDAFLFASLDPVVEMARREPMPANI*	common_virus_hmm	common_virus	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0008	persistent	direct	high	1493	0.999	GCA_012972105.1_04494
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4583897	4584745	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	6487	7335	GCA_012972105_1_1_4450	GCA_012972105_1_1_4450	+	6530396	.	pfam07506	RepB plasmid partitioning protein. This family includes proteins with sequence similarity to the RepB partitioning protein of the large Ti (tumor-inducing) plasmids of Agrobacterium tumefaciens.	MRTTKAGLRDFVTNNRHAIRLTVDSRAPMNPLRVSGLLKTYRRQVDNMQEFIREADAVKHQMESVVDAFRHVLRIAAFQGLLQSNGFVTLPSILTQNSPEAGVKAGISEDGQTPLPHVAEPLVEGICLEALDMLNDFGAPLKIFGLLREVVPGRQVEIVRLMLAMNRVEFRVARLLIELTPRSQLTNPLARRKRYEGISPAQMAAMEADIAEVSHDYLSAARTHGSEMLNLIAATSYFDRLLNNPQLVRYLARNFARQLEVFQNLLDFREARYKKHPPQAGS*	mmseqs_cdd	nonviral_gene	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0009	persistent	direct	high	848	0.999	GCA_012972105.1_04495
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4584763	4585224	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	7353	7814	GCA_012972105_1_1_4451	GCA_012972105_1_1_4451	-	6530396	.	.	hypothetical protein	MVDTAEDNFRIEVWDREEKTHLETICRSPDAVVSQAAWHAAIRRRPGMLLIHYNSRHVMEKIITPGEVKVPPQTIIDGSIHAGLDVALGDLRSWHTLRAWCTTCSHHAEVKPASLIKRYGKEALFSSVERALFCTSCKKGGPVRLEVHSMPRN*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0010	persistent	direct	high	461	0.998	GCA_012972105.1_04496
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4585225	4585434	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	7815	8024	GCA_012972105_1_1_4452	GCA_012972105_1_1_4452	-	6530396	.	.	hypothetical protein	MGKRQNAPNGEAVSELEQAAQRAIEAAGGDAVVALLRALARNIEVERELALFRAAVSNGFSRGWHKARP*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0011	persistent	direct	high	209	0.995	GCA_012972105.1_04497
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4585601	4585858	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	8191	8448	GCA_012972105_1_1_4453	GCA_012972105_1_1_4453	-	6530396	.	.	hypothetical protein	MDSDDPPIERRAHPRTVVLKDGVIIAEGVNISCSVRNQHTHGAELRVEPGVVVPERFVLLVHVDGARYRAVVRWRKKERLGVQIY*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0012	persistent	direct	high	257	0.996	GCA_012972105.1_04498
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4586429	4586617	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	9019	9207	GCA_012972105_1_1_4454	GCA_012972105_1_1_4454	-	6530396	.	.	hypothetical protein	MYGGQARKDGKERAVPDYWQELADAWLQGFDDVPIGSEPKPVSEGLEAELGESAVAHSPIND*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0013	persistent	direct	high	188	0.995	GCA_012972105.1_04499
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4586678	4586935	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	9268	9525	GCA_012972105_1_1_4455	GCA_012972105_1_1_4455	-	6530396	.	.	hypothetical protein	MDSDDPPIERRAHPRTVVLKDGVIIAEGVNISCSVRNQHTHGAELRVEPGVVVPERFVLLVHVDGARYRAVVRWRKKERLGVQIY*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0014	persistent	direct	high	257	0.996	GCA_012972105.1_04500
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4586936	4587817	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	9526	10407	GCA_012972105_1_1_4456	GCA_012972105_1_1_4456	-	6530396	.	PDB:2HIV_A	Thermostable-DNA-ligase	MQSDPDRLRFIKPQEPMLVLEPPVSDDWLHEIKYDGFRVQIIRDWAGVRAFTKNGHDWSKRFWPVVDAVEKLPAKSFIIDGEMIAPDPDGRPNFHEMHSRMAWNAELLAFVAFDILHKDGNDLRGLPAIERKAILWDLIKPATGIIQYSQHVEGGGADFFAAVDRMNLEGMVSKRRNSPYRSGESDAWVKTKCWDVDDLDLIGVKREPGKQTEGLFARNGKYVGKATIAITRAIKERLWQRIERDRVQQPAGVPSSVADGDVEWVKPGITGRVRHLRGEAKLRHASVQDFREE*	common_virus_hmm	common_virus	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0015	persistent	direct	high	881	0.999	GCA_012972105.1_04501
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4587941	4588129	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	10531	10719	GCA_012972105_1_1_4457	GCA_012972105_1_1_4457	+	6530396	.	pfam12244	Protein of unknown function (DUF3606). This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 85 amino acids in length. There is a single completely conserved residue G that may be functionally important.	MTDDKNKLGYQDRSRVSGDEEYEVGYFASKFGLSIPQVRELIAKHGNDRDTLEREAKALKGR*	mmseqs_cdd	nonviral_gene	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0016	persistent	direct	high	188	0.995	GCA_012972105.1_04502
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4588314	4588517	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	10904	11107	GCA_012972105_1_1_4458	GCA_012972105_1_1_4458	+	6530396	.	.	hypothetical protein	MSSHGNVLKLSDLVKPDAALQAAMDLYGVDATTAVAHCALTARYDGREADYRFWCEVFRQLKENNEH*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0017	persistent	direct	high	203	0.995	GCA_012972105.1_04504
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4589840	4590397	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	12430	12987	GCA_012972105_1_1_4459	GCA_012972105_1_1_4459	+	6530396	.	.	hypothetical protein	MVLTYMSIKTHLNGLVTNGDLYRLEAKPPRRSLRALYCTPAVMKELNDATSSVNYHKARADCMRVMERWVSGEPIDVSMSGAGRGAVLARLDPPPPDSWELRVTEPSTQFRIFCQFAEQDTLIATHIRTRGTLLKTKMRTGKNRSSAWTGAMWECKTACQTHLAPHVALSGNDPALFISGNYHVI*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0018	persistent	direct	high	557	0.998	GCA_012972105.1_04505
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4590387	4590836	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	12977	13426	GCA_012972105_1_1_4460	GCA_012972105_1_1_4460	+	6530396	.	PFAM:PF10078.8	transcriptional-regulator	MSFSFDLPTEDKRRLAFLRVRDAAYDAISALWRARKAQGLSQKDICDALDRDPAWVSRNLAGPANWTMKTFGEFVEALDGHATITVEPAESVSLPHYDIYEDDEDDVSVMLEMMEVRLAHPNGGVVVSLQAPTDQPETIVVRKALAYAG*	phrogs_hmm	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0019	persistent	direct	high	449	0.998	GCA_012972105.1_04506
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4590826	4591323	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	13416	13913	GCA_012972105_1_1_4461	GCA_012972105_1_1_4461	+	6530396	.	.	hypothetical protein	MPASSPSFEVDSVTISEYVSQDGEGNQTFVGVRVGPSYIPELPQALPAWFVTVVMRPKTSEFKFAIHVGAPNKKEMLRINFDYKADRVLADGGHLISAIQLPSIPFPGIGDYPIRVKDENGETVYRHVLAFRLGQPDKPVVKIDGRAMVNPQFLNPPTAPGRAMS*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0020	persistent	ambiguous	low	12	0.024	GCA_012972105.1_04506
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4591363	4591764	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	13953	14354	GCA_012972105_1_1_4462	GCA_012972105_1_1_4462	-	6530396	.	pfam07439	Protein of unknown function (DUF1515). This family consists of several hypothetical bacterial proteins of around 130 residues in length. Members of this family seem to be found exclusively in Rhizobium species. The function of this family is unknown.	MPTSGTKSLEMMIGGLLQATQDMQRDITEIRRDIRDSDARAALSYEQSEQRAAASRAKMYQKTDELVERVSATESAVSKLNADMTSVKEVTAEVTRWKLMGLGALGVTGMAAAALASIVTAYWEDIWRVLRGG*	mmseqs_cdd	nonviral_gene	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0021	persistent	direct	high	401	0.998	GCA_012972105.1_04507
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4591779	4591961	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	14369	14551	GCA_012972105_1_1_4463	GCA_012972105_1_1_4463	-	6530396	.	.	hypothetical protein	MAPLRSALGNSLAGAQGKTVADQNKIDRTVAPGCAVKLYTRAECDLHTKASAARRAELKS*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0022	persistent	direct	high	182	0.995	GCA_012972105.1_04508
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4591933	4592226	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	14523	14816	GCA_012972105_1_1_4464	GCA_012972105_1_1_4464	-	6530396	.	.	hypothetical protein	MSFLVTLLVGRLGVSRLAGGVIVWAVIALVASGAALGVYEFIKDKGADEVRAKIEKGNQDAIRKGIDARMSLDECIDAGGVFDFGRQRCGAATLGPR*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0023	persistent	direct	high	293	0.997	GCA_012972105.1_04509
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4592223	4593074	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	14813	15664	GCA_012972105_1_1_4465	GCA_012972105_1_1_4465	-	6530396	.	CDD:COG3926	Lysozyme	MAASREKESLARVLAHEGGYSNHPNDPGGPTMKGVTQRVYDGYRKGKGLATRSVKGITIGELNEIYDRQYWDAVQGDALPAGVDYVVFDGAVNSGPGRSIMWLQQALRPAYTGRIDGVLGVGTLAALKADKNNDELIDRICNARMAFLKHLSTFGTFGRGWTARVAEVRAIGQAWATGQVPQAANFVDGGQAKAFVDDANAAPSTAPADLATGAGTGGLGLSGYLYDLQNQLSPLSYTSEWIGKVVAVVALASALLAIGGLAYRWYAHRKAKRLAAALGAAPA*	common_virus_hmm	common_virus	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0024	persistent	direct	high	851	0.999	GCA_012972105.1_04510
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4593322	4593540	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	15912	16130	GCA_012972105_1_1_4466	GCA_012972105_1_1_4466	+	6530396	.	.	hypothetical protein	MNYDEPIGNWVKLPVAWSELRPGLREEVACRAGDIHTFDGGHLHRVDGQWEVLSSGTSNDADVVRNALQKPN*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0025	persistent	direct	high	218	0.995	GCA_012972105.1_04512
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4593537	4594613	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	16127	17203	GCA_012972105_1_1_4467	GCA_012972105_1_1_4467	-	6530396	.	COG1835	Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains  [Cell wall/membrane/envelope biogenesis]. 	MFYRNIQGLRAVAALMVMFTHIYPALPMQAHWTLPYVSTMGPGGVDLFFVISGFVVYLSADRLGKKAEIVGRWLSFREFTVKRVLRIYPVYWVAFFVASVLLLTTTLVVAPPQISERPLWGLLLLIDQPNNRIGAAWTLQYEVAFYAICALAILLFPRRVLLMLGPVAVAVFLGWVAGIVKPTAYLFLEFVFGIVVALLVQRKISGHAASSLAVGVGGILIGAVYFHSQGGWWVLGHMWRVLCFGLPSAFIVYGLVAMEIRAGWVFSRLWVGVGDSSYSLYLWHYPLFAVLAAFYADLGIISEVPVEVLALTSCSIAVLFGFVSYYGVERPINKSGWVARLAGVQPEAGIGRSAEVAA*	mmseqs_cdd	nonviral_gene	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0026	persistent	direct	high	1076	0.999	GCA_012972105.1_04513
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4594648	4595781	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	17238	18371	GCA_012972105_1_1_4468	GCA_012972105_1_1_4468	-	6530396	.	COG1835	Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains  [Cell wall/membrane/envelope biogenesis]. 	MDTLTTQIKRPDRFPYLSALRGLAALWVVMVHVAHMPNPHLMLPWWAEALVGNGVMGVNLFFLVSAFSLCLTMPKHDKEERPYLGFMLRRFFRIAPLFYLLIIVTCLLRIFPFSWSAIAANISFVFNFIPGMGYQTGMVLAGWTIGVEMAFYLVFPFIYARTKSVTLAIRALIVAFFVAAAFRAVIGNLVADPASYINQSIFGLVPMFVFGIVAFYVVQTAGEWKYKREIGAVLLASVPLQFYVIIYGLAPFGPAIYWQGPMFGCLLVGLYLLPIRLLVNAATVWLGNISYSIYLVHSPVIVALAYKSSVFQRLQGLGLGPVETYALALGLTLACVIPTAALTFYGWENWLNEWGKGFASRMAGRKGQHRIVVQEAA*	mmseqs_cdd	nonviral_gene	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0027	persistent	direct	high	1133	0.999	GCA_012972105.1_04514
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4595876	4596121	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	18466	18711	GCA_012972105_1_1_4469	GCA_012972105_1_1_4469	+	6530396	.	.	hypothetical protein	MEPLEAVFIALVLGLTVVFLAHGYMVRKDGNWQSFHSWWSRKLVDGSIASGDLMRRWVKGSWQYRALTESEEKEDGELQVW*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0028	persistent	direct	high	245	0.996	GCA_012972105.1_04515
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4596130	4597962	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	18720	20552	GCA_012972105_1_1_4470	GCA_012972105_1_1_4470	-	6530396	.	cd01832	Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.	MPVVPFNMLFADGPAGNPYQPPKQDLRDTFNDLQDQVSAVGDQISAGDAASRAYTDAQILGDRAMLRKYAVDMYTGSAVGIECFGDSTENGHNGESPFGQVAEIPSARMQYLLRDYTNNNLITVTNRAIDGTRLTQMIDGTDGSGSLFAAKMAVSPALIITLNHGLNDCQNGVPTSLDTYRSYLVQAVKICRSAPIPKVMIFKTPNPIYAVNTYGLGTTDKANRLNDYVQIMRDVAEAMGVVLVDVNEMVDALVASGNYRVQDIVPDGVHPSQYAYQMIGQLTARPILHPQRGYAAHQTITAGGGVANQAPANSASTAEGTRGGMQMVSVATAVAKSIKQLVMVEDKGGVDVYLSYPLWTNGIASAGCTFDNASVGPINQNFVNLGSEIIQDHEVCVARNVPYGLHWINVNANVINSIAVNGVRLRPSRTKRQYTLNTGSMDVYRDAPCRNFTFFSTNADDTILLDELVVSKLLATDKNDINFDAVMNKGTRFVILGVRSGLLTGVSTLKGRMGLGVGTDNTTGFVTVYQLTGGGTYGATAVNAADFSAAKRAWRFIIPAGTNNLQVWADGSLLGTVAITVPFVGGNMGASAVAGSKSLTIENLRTINTN*	mmseqs_cdd	nonviral_gene	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0029	persistent	direct	high	1832	0.999	GCA_012972105.1_04516
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4597976	4600258	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	20566	22848	GCA_012972105_1_1_4471	GCA_012972105_1_1_4471	-	6530396	.	PFAM:PF13550.5	tail-protein	MAHSVNPFDDALRQALAKASRKVTYNPGIGAFETETTQEIVAEGWSGEYRWPVHRDPIFTPIFTAILGSGGFSLFGATISYAAIASAIVTTAIVAGVQYLLTPKPPKPEDGRAPLTQPIPYRFWGVGEARLAGAMMLWEALDNRMFSVQAIVGHRINAYTGYYLNDDKVDVVGGHVQSPGGGRYVDDGRDLVFVYPALGLVPETPIADFVTILSGQGIWTNNHRGDGQASIGMLCVGPGAENFLKSFPYGKPALSVVAELALVWDFRNSAQDPEDPSTWAFSRNPILHLAWHECFNPFGTKRDFRKALLPVLDMWQEEADVCDEDVPRASGGTEKRYECGGFDTTEHDPKSGTNAILATCDGWMCERGDGALLVVAGKFREKYVATLTDADIVGHTVQHDVLPEEEVNQFIPKFTYPATDYTTTDTDYFEDTAAQIAAGRVLPQDGNYIWVQQWRQARRLGKREFARARAKKRGTLDIRFTGMNAIYAPWVRLNTSRRLPSLNGKLINNRRSVLSVSRGGFQMTFVMMPDDIDAWDPALDEGSAPPVPPKPVSDGIPLPIIDTAVAVSGGGSVYIRVVLIDPNRIDVTPVVHYRISDVGGGVPGAWVEQKFPGAAPSAGLIVVNTNPVPANTSIDVQAAYTGANNSYGQWTSTVTLLSTVDTTPPGAVTSVVATGGVGQVSLTWNTPNSGNYVATNIRRNTANNEGTATLVRTEYGAPSSADAWTDTGRAAGTYYYWLRSANASGVESTTSVATGPKVVT*	hallmark_hmm	common_virus	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0030	persistent	direct	high	2282	1.0	GCA_012972105.1_04517
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4600243	4600650	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	22833	23240	GCA_012972105_1_1_4472	GCA_012972105_1_1_4472	-	6530396	.	.	hypothetical protein	MTLEEYIRLPHRWQWGYTDCTLFTADWVVAATGKDPGAESRGTYFDADGAAAILRASGGPERLVGAKLSALGFHRIQRPRDGDIGMVLAMTGFDAAGARVKEIPAIRFGPLWAVMSARGVMVKHLEWTGVAWRIA*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0031	persistent	direct	high	407	0.998	GCA_012972105.1_04518
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4600684	4600884	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	23274	23474	GCA_012972105_1_1_4473	GCA_012972105_1_1_4473	+	6530396	.	PFAM:PF03333.12	HTH-DNA-binding-protein	MSLRKVQRNAEILSMKASGKNAVEIARTIGVSTTRIRTILKFYELHPEIKASDLERPPKRPKAVNS*	phrogs_hmm	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0032	persistent	direct	high	200	0.995	GCA_012972105.1_04519
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4600923	4601297	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	23513	23887	GCA_012972105_1_1_4474	GCA_012972105_1_1_4474	-	6530396	.	.	hypothetical protein	MTAFTALEIAALHSIFSETPKLTSALERQLTLATVTKRQNSGVGFFTSIAVADDVPLVSNSSRVLGNETQAHVAGLELGFGFVLFLEDGKLDLLEGFNWGSESTASLDLAAVTFEVYKRRLIGT*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0033	persistent	direct	high	374	0.997	GCA_012972105.1_04520
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4601356	4601670	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	23946	24260	GCA_012972105_1_1_4475	GCA_012972105_1_1_4475	-	6530396	.	.	hypothetical protein	MRTLAERLIGKHLKGIDASEPGHGVGALFTDGSAFTVYSSVAVLISSLANVSRVEVVNVSERQVELHLSSHGCITISTDWDKHDMVEAYVFEDEDGTLIVENGT*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0034	persistent	direct	high	314	0.997	GCA_012972105.1_04521
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4601748	4602380	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	24338	24970	GCA_012972105_1_1_4476	GCA_012972105_1_1_4476	-	6530396	.	PFAM:PF09931.8	tail-protein	MAWQDLVGSYSLQYVPQAVLDRMASSHMLGIFFRLDTDPGLHIWAGVNDIPAGFDSLDEDGTVYLGGGRLLNIPALEVLVNGQSSSVEFGISGIDPDTAAKVLDTMPDVRGKDLKIGITTLDDYYQPTSPIIALWTGTASHPTESSPAVSGTENPTTTITLATVSGNNTRSRASLVLWSGPHQKAMYPTDKFCDGTARLARGVAPAWPNY*	phrogs_hmm	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0035	persistent	direct	high	632	0.998	GCA_012972105.1_04522
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4602384	4603136	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	24974	25726	GCA_012972105_1_1_4477	GCA_012972105_1_1_4477	-	6530396	.	4JMQ_C	Bacteriophage T5 distal tail protein	MGRYTDLPTLNVDFLKPTRMSFDTKGGGLEGGRNGLGESVTIETSGGGVLVGSYEGCVVTDREQHEYVNWIAARMNSSVRFMNVPILSDWMGPFPVVNGIPQSTIGGIPHSDGAQFSDGAGYSQPTVIGTIAAAGLNAGQIYIRVYGASRKLRWSDWFSIYHPTKGWRAYRYFDPSDPKDAFEVIDGVLRSGKQYLVSLDRPLREAVVNGTRVKFDRPLCVMKFPASFSLAWEAEGWWQSSPTLQFVEGF*	hhsuite_tools	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0036	persistent	direct	high	752	0.999	GCA_012972105.1_04523
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4603140	4606232	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	25730	28822	GCA_012972105_1_1_4478	GCA_012972105_1_1_4478	-	6530396	.	pfam06791	Prophage tail length tape measure protein. This family represents a conserved region located towards the N-terminal end of prophage tail length tape measure protein (TMP). TMP is important for assembly of phage tails and involved in tail length determination. Mutated forms TMP cause tail fibers to be shortened.	MTVASLGFAVDSSQAVSAKTNLDNMSAASAKAEAAQKRLSSASSASNAALSKIAAGVDQANATLVKLASIAEGSNASLVKLVATAEKTNTTLASIGTGSTQVVSGIGRVAPAADKSTKALNDNANAARLTSNQMLNLSRQGNDVITMFALGASPVQIFASQIGQVYDALDSGPTGLRGSLKAIGTAAKSAGQALLAFMVTPAGLAAGAGVAAVAGLATYIISTRKEVKGLDELLKDHASVLRGIGDIYGSIADKAKNAFSVSNLNGLQLLSSSTQAGLKIQIANQTQTAMSDLGRFINPGKSAGGFFSTAGEFKPFSDAIDYLRKTAREGTPDIIGFRKMVEDKWALDPNNAALTASAGKLMDLTKDADAAARALKQLQIAQEALAKSVGPGGLPLRRGSLSTEDMGAYERYRAAGSVSADRAQQAFDAQRQGLYARSPAELAAAARAQASAQYNDNENPAERARRIDMAGQQAALAAQHALDEAQKERKRSLDQTLASQQLDLDLIGKTTGAAEAMRMQFQLTQQLREEAARNNVPVDQQELELIKQKADAYGKMADQIARAQLGNDLAFERSQQFLSAGEQQIASRLRNTGIGMDSPEAQQMRDMAKFADAQGLAVGFLTDFKSELLRNGGDVGKALGTSILNALTKSMDDQLGKIFDTMATWLASAITGQRPGVGGAAAFGTAGGFADMIFGSASNDNYAPGAVTRAPLAAIGGNMAAYAAAIRSIESAGSGGYSALGPVLKNGNQALGAYQVMKSNLPSWSQDALGKTLSPGQFLADPAAQDAIFEKQFGKYLTKYGNPQDAASAWFTGGPLSTGAKAKDVLGTSGSVYVDKFNAAVEKASGSLGGLDDTVTNTVKSLAGGIGGQGGLASILDGLKPGNFQANTTLSDILGYSGGGASAGGSSGGGFLSSIFSFIPKLLGFADGTESAPSGWAWVGERGPELRKLRAGDVIRKNPRSMQMAAQNNNGSPPVAPKIDLHVTVIGGSGDDHIRTLSRQGAQEAISEYHQGQINGGFGETQRRYTSQKG*	mmseqs_cdd	common_virus	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0037	persistent	direct	high	3092	1.0	GCA_012972105.1_04524
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4606242	4606355	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	28832	28945	GCA_012972105_1_1_4479	GCA_012972105_1_1_4479	-	6530396	.	.	hypothetical protein	MISSVLRAVFGEDENPAIEVTTQPMSEDYFDAMFAVQ*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0038	persistent	direct	high	113	0.991	GCA_012972105.1_04525
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4606478	4606825	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	29068	29415	GCA_012972105_1_1_4480	GCA_012972105_1_1_4480	-	6530396	.	PF11836.8	Phage tail tube protein, GTA-gp10	MSKPALGAGNVEIELDGETVVLRPSLMAAQAISRQSGGISSAVRSVGNYDFDVIVSVVTLGLGATGQEAKAIPEKVWRTGLTDLIGPVSTYLTIIANGGRPMSGGEEAADPQKKE*	hhsuite_tools	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0039	persistent	direct	high	347	0.997	GCA_012972105.1_04526
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4606822	4607010	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	29412	29600	GCA_012972105_1_1_4481	GCA_012972105_1_1_4481	-	6530396	.	.	hypothetical protein	MKVFNRGAEAHKLSHKGEEYLLAPGNHVELELTHAEAKAMPSPFEATGTPIKAPKAEPEKKA*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0040	persistent	direct	high	188	0.995	GCA_012972105.1_04527
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4607023	4607757	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	29613	30347	GCA_012972105_1_1_4482	GCA_012972105_1_1_4482	-	6530396	.	PFAM:PF16463.4	major-tail-protein	MPIKVSPVAGSRFYIGSAPVDVPDVDVTEADFAAVTWIEVGQYETMGNSGDSAQGNTVNLLNRRRTYNWKGSRQAPQRSDNFALNTSDPGQIAMIAAEATDFNYPFKVELNGAPITKSATATITIASPGVVTWTGHNLAANTAVKFSTTGALPTGLTAGTTYYVKTVLDADTFTLSATKGGTAIVTTGSQSGVHTATTVPAGPQRLFMGQVSAAEEGMGGANNAQMLNCTVLPNTNYVRVAALG*	hallmark_hmm	common_virus	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0041	persistent	direct	high	734	0.999	GCA_012972105.1_04528
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4607809	4608225	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	30399	30815	GCA_012972105_1_1_4483	GCA_012972105_1_1_4483	-	6530396	.	PDB:5A21_G	tail-completion-protein	MPSIETQIWLALKGRVQALVLSPTLPIAWPNETYIPSPTQNYLRVTHVPNVNRRLFIGSTEPHQRIGLLQVDVFAKKNQDASVAAEIAGQVAAWFPTDLRLTYGTVAVRITKAPDVAQAIADDTHWLVPTSVEYECFA*	hallmark_hmm	common_virus	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0042	persistent	direct	high	416	0.998	GCA_012972105.1_04529
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4608234	4608824	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	30824	31414	GCA_012972105_1_1_4484	GCA_012972105_1_1_4484	-	6530396	.	PDB:1A73_B	Endonuclease	MADKSVCKIEGCGKGGRITRGLCSSHYHRLSRHGDPLAGRTPKGDVLSWIERVALTHRANECLIWPFYRRDDGRAGINMGDGESSLAHHHICEMAHGPAPSPDHIACHDCGNGHGGCVSPGHVYWGTNADNSADMIAHGRSTRGEKQPTSKLTEDDVRAIRKLAGSMIQREIAEKFGVHIMTVNDILHRRRWAWLE*	common_virus_hmm	common_virus	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0043	persistent	direct	high	590	0.998	GCA_012972105.1_04530
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4608914	4609363	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	31504	31953	GCA_012972105_1_1_4485	GCA_012972105_1_1_4485	-	6530396	.	PFAM:PF04883.11	tail-completion-or-Neck1-protein	MASFAATVGDWCLKVPIAVEIVFKEAAQELVSQLDQLLADEVYAKPQPPGYKRTGFLRASLMASTSAMPTLSRDNPGVAVPPDLGDVILVINGADLGDTLYLGYTASYAAVVAYGANGTRPRPWVAMAAQRWQMIVDQKATEIKARLGL*	phrogs_hmm	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0044	persistent	direct	high	449	0.998	GCA_012972105.1_04531
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4609363	4610403	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	31953	32993	GCA_012972105_1_1_4486	GCA_012972105_1_1_4486	-	6530396	.	PFAM:PF04233.13	minor-head-component-F	MLVRLTPRQRFEILVSQFEPAVRAAFIEAIDNVTSNIVLRRIIERLERGDISGAINAMNLDPAAFRPLDEAIRAAFNGGGVATVEGMPALRDPFGHRIVVRWDARNLAAEGWLQTHSSQLITGIVQDQQTAIRAALETGLARGDNPTKTATAVVGKISIVTGKREGGLIGLTTAQSEYIARARQELLSGEPDQLKAYLNRQRRDKRFDRTITAAIRDGKPIPNALVDRITGRYADSLLKLRADTIALHETFAALGASKHIAFRQQMEKGNLQAQHVTKGWKHTPQEHGRMQHIAMQGQVVLFDQSFTAPDGTAIPYPHAPGVPTRHTLGCKCFAEYKIDFVAQLVR*	hallmark_hmm	common_virus	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0045	persistent	direct	high	1040	0.999	GCA_012972105.1_04532
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4610407	4610787	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	32997	33377	GCA_012972105_1_1_4487	GCA_012972105_1_1_4487	-	6530396	.	PDB:5A21_F	head-closure-knob	MAGFYDDMAEMVTDLLQPGADGGLGQGVVQLKRETAGGVDPDQPWVPVEPTAAFYPLDAAVRRVNQKYIDGTLIVATDNQVTFAVPAIVPAMSDTLIIDGRELAMKDLRPIPPAGTVVAYIAFVAG*	hallmark_hmm	common_virus	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0046	persistent	direct	high	380	0.997	GCA_012972105.1_04533
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4610789	4611274	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	33379	33864	GCA_012972105_1_1_4488	GCA_012972105_1_1_4488	-	6530396	.	CDD:cd08053	Head-Tail-Connector-Protein	MAGYGSDNALKAYWDAAGYTYAADAPFAALRQRGSAYIDGTYGMRFPGQPTGGIAQEREWPRTGATAYGASLATDLIPTRVEWASYEAAYIELKKPGSLSVSFDPARKVKRQKVEGIEREFFEPGDNGNIFAPDAPVSSVIEGLLAPLVGPASGQPAIMVV*	hallmark_hmm	common_virus	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0047	persistent	direct	high	485	0.998	GCA_012972105.1_04534
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4611280	4611612	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	33870	34202	GCA_012972105_1_1_4489	GCA_012972105_1_1_4489	-	6530396	.	.	hypothetical protein	MKITNASQGPRGIHTVEGLRIIPVGGFIEAEVSAVELKGAKETGWFSIEGSKADKPHEPGDAKTAAEVLALADGNFMAFKSAASKLLGDKTPEKKAEIVAALEDLATKPE*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0048	persistent	direct	high	332	0.997	GCA_012972105.1_04535
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4611623	4612576	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	34213	35166	GCA_012972105_1_1_4490	GCA_012972105_1_1_4490	-	6530396	.	PDB:5WK1_D	Major-Capsid-protein	MNAHIMQDAQQVAMSFLIRQASLIEPTVYAMRYQDIQYANLIPVDTSAPEWIQSVTYFSMDSVGQAQWFNGNAHDVPKVELTREKFETTVSMAAIGYGYNLEELGTAQLLGMNLNPDKATTARRAAEERIDSTAFIGDAAKGFSGLVNSSTPTATQAPADGTGSARTFASKTADQVLRDVNTQITGIATDTLGNELADTILLPYSIMLDLSQRRIDTVNQTTILEWVMQKNVYTLTTGAPLTVRGLFGYLETAGTGSSKRMVAYRRSPEVLKMHVPMPFRFLPAWQTGPIKFDVPGIFRVGGVDIRRPKAVRYLDGI*	hallmark_hmm	common_virus	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0049	persistent	direct	high	953	0.999	GCA_012972105.1_04536
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4612591	4613028	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	35181	35618	GCA_012972105_1_1_4491	GCA_012972105_1_1_4491	-	6530396	.	PFAM:PF11133.7	virion-structural-protein	MPAIQTNYSAQHARWIEGMVLNMEPSDIVSRLCEDAEGIGFGKVAVQGTADNQVVDSEATVKFCGIAVLDETQPTGKYEQYATAAIMKKGVIVVQASVAVAVGDPVYYVPATGVLTNSASGNTLIANAQWDTSTAGAGLAALRLG*	phrogs_hmm	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0050	persistent	direct	high	437	0.998	GCA_012972105.1_04537
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4613032	4614180	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	35622	36770	GCA_012972105_1_1_4492	GCA_012972105_1_1_4492	-	6530396	.	PFAM:PF09979.8	head-maturation-protease	MQFTDAVTVAGTRQTADGYLVATARAVRTGIQLYAGHEVGKPDQHVVRVYRAADQVFSLDSLQSFSHAPITVDHPDEEVTADNWKTLSVGEVSTAAKQDGQWVMLPLILKDAAAIKSVMDGKRELSAGYTCDLDFTPGITADGEAYDAQQRGIKINHLALVDRARAGSKARIGDGVGPWGAAPISTTDKETITMSDALRTVVVDGLSVTTTDQGAQAISKLLKDLESSAAKLVDAETKHQAALAAKDAELAKAHAERDAANAKVLSDADLDKRVAARADLITKAKAIAKDVKTDGLSDSAIRKAAVTAALGDAAVRDKADAYIDARFDILVEDAAKKSGGADPFRQVVQNGLQTADNTNGAAAAHNAMVRDMSSAWMMKKEA*	phrogs_hmm	nonviral_gene	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0051	persistent	direct	high	1148	0.999	GCA_012972105.1_04538
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4614216	4614425	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	36806	37015	GCA_012972105_1_1_4493	GCA_012972105_1_1_4493	+	6530396	.	.	hypothetical protein	MIDRYTKGLLTVIAVSLAVIAIRGEIRPAAASGETACGTTVPCLISLGGAAVPVQIVDTVNVYSMSKPN*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0052	persistent	direct	high	209	0.995	GCA_012972105.1_04539
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4614508	4615881	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	37098	38471	GCA_012972105_1_1_4494	GCA_012972105_1_1_4494	-	6530396	.	PDB:8HDS_J	Portal-Protein	MGNIISFARDSLTNLVSRMGTGRDKASASYYAFTPLSDAELLAAYRTAWLPRKIVDIPAFDAVRAWRDWQAEGDKIEPIEAEENRLNVRGKVFEAKVKARLWGGAAIHIGTGDADLASPLEIERIGKGGVKYLTVLSRRQLSAGEFDRDPASEFYGQPKFYTLTAGTTAQVQIHPSRLVIFQGNTQPDIDLIEGQLSWGDSVLQSVMDAIKQADGTAANIASLVFEAKIDIIKVPNFMASLANEDYKAKILERYTLANTAKGINGTLLLDKEEEYEQKSASFATLPDVLDRFLQIVSGAADIPATRLLGQAPAGMNSTGESDLRNYYDRLSAMQQVEMTPAMHRLDEALIRSALGSRPADVYYEWAPLWGMSETEKATVFKTKSDAARALAGGNGQSPLIPIDALSEALVNAFVEDGSLPGLEAAINEFGTLAEQEPSEEELEAAAANQNAAGLSAY*	hallmark_hmm	common_virus	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0053	persistent	direct	high	1373	0.999	GCA_012972105.1_04540
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4615890	4617278	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	38480	39868	GCA_012972105_1_1_4495	GCA_012972105_1_1_4495	-	6530396	.	PDB:5OE8_A	Large-Terminase	MAGAEQGQGGPTIVRPQAGPQTTFLASPADIAIYGGAAGGGKTWALLMEPLRHVANPGFGAVFFRRNLTQVRNEGGLWDESEKLYPGLNAQPRSAPDLSWTFPAGSTVSFAHLEHEKTIYNWQGAQIPLICFDELTHFSAKQFWYMLSRNRSMCGVRPYVRATCNPDADSWVAEFISWWIDQETGFAIPERAGVIRWFIRIGDTIIWADSKEELAHHVNPIDGEPIPPKSVTFIPAKLSDNALLMAADPGYLANLMAQPTVERERLLGGNWKIRPAAGLLFQRGWCEVVDAVPAGVTWMRGWDLASTPKVEGNDPDGTAGTKIGKLPEGRYIVAHHVKDFLSPAGVERLIKNTADADGIATKISLPQDPGQAGKSQVTNLVKLLIGFDARATPESGDKVTRFSPFSAQAEAGNVLVLRAPWNEAWFSALEGFPEASHDDDADSTSRAFNALIDASTYTLANI*	hallmark_hmm	common_virus	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0054	persistent	direct	high	1388	0.999	GCA_012972105.1_04541
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4617265	4617729	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	39855	40319	GCA_012972105_1_1_4496	GCA_012972105_1_1_4496	-	6530396	.	PF10045.9	Uncharacterized conserved protein (DUF2280)	MAKAKLNDEVKTFIVQALACFDSPSTVAASVKRELGIDVSRQLVESHDPNKKAASGLAPKWRVLFEETRKAFLEDTASIGISHRAVRLRALQRMADKAETMGNMSLAAQLHKQAAEEVGNAYTNRRELTGKDGKDLPVPVSPVTIFQLPDNGRS*	hhsuite_tools	nonviral_gene	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0055	persistent	direct	high	464	0.998	GCA_012972105.1_04542
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4617776	4618003	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	40366	40593	GCA_012972105_1_1_4497	GCA_012972105_1_1_4497	+	6530396	.	PF13719.6	zinc-ribbon domain	MSKNGVIVCSECKKPFRYADHHLRILGAKEKEPVDCPYCGHTEAEWTSSAWWDTSQMPRDEQDQWLKDNPGVKIS*	hhsuite_tools	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0056	persistent	direct	high	227	0.996	GCA_012972105.1_04543
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4618000	4618626	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	40590	41216	GCA_012972105_1_1_4498	GCA_012972105_1_1_4498	-	6530396	.	pfam18894	Putative phage metallopeptidase. This entry represents a probable metallopeptidase found in a variety of phage and bacterial proteomes.	MALVHKQRPLPPAELLEANEINFASAWDLVEWALGTFIVEEASLRNDDHRHLNHASIGALWTNVPNGRAGRSIIGQAERGLPPAGKWLRARIERQILDWFGAVPDFILTFDAHYASQCSDAEFCALVEHELYHCGQERDMFGAPKFRKSGLPVFAIRGHDVEEFVGVVRRYGADAAGVREMVDAAKAGPEVANVNIAQACGTCRLRLA*	mmseqs_cdd	nonviral_gene	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0057	persistent	direct	high	626	0.998	GCA_012972105.1_04544
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4618668	4619174	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	41258	41764	GCA_012972105_1_1_4499	GCA_012972105_1_1_4499	+	6530396	.	.	hypothetical protein	MIKLTRFDGVAVEVKAELIVRVRQTDTGVLKEHGNSRVDGLVVPFYMDQPQTIADAVHAEIKTFTSLNQPGGKPVWFDGAKASGPVPLSSVNRQPLKEGKANSALQIGNAVQLVNNSPQEVYKLISDMGGNAEPPIDNSKMAKIQTLNKADGTETQIWDQALYADPTS*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0058	persistent	direct	high	506	0.998	GCA_012972105.1_04545
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4619410	4620198	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	42000	42788	GCA_012972105_1_1_4500	GCA_012972105_1_1_4500	-	6530396	.	.	hypothetical protein	MEQIRQYLLIVAICGFGVTTHQALAAPAEEHHTLTLTPNSAWDSWQDRLFHDTPVIGTFTGHGVTCVKYNAFPGPIQGKVGFGQGEWGNDPCMSFIVEHTVGFDTGPYKQIPSKRLDRVVLTYDEAPFASCAVFVGSPYSNCWQGGSGAAVDKPTGCVTVRVPNIDWQNRGGPKGLMPFNTKPGTNQIRRGEWDVTEVFRWQADSGMPIGGNPGFGFTLGSPFTSTKQLTAEDNTVCVSDVKNVRLIVDYTTFPNDVFVQPK*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0059	persistent	direct	high	788	0.999	GCA_012972105.1_04546
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4620255	4620659	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	42845	43249	GCA_012972105_1_1_4501	GCA_012972105_1_1_4501	-	6530396	.	.	hypothetical protein	MKSRLLWGLVCGAAVATLPIVSLPAISTASEMVVVPLDVDVYDHPGGEGKPRKKNLQANSTVTLLVKRKDHWCQVEGDAVPGGKGWVWCGIGGDQKNYALMPARTGTIPISQIPGATGEVLPAGSSGGGGPGTP*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0060	.	unmatched_CDS	none	0	0	.
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4620989	4622008	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	43579	44598	GCA_012972105_1_1_4502	GCA_012972105_1_1_4502	-	6530396	.	COG0492	Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]. 	MQYLKYASQRVDFTLSLKSSFSGPLSRQAQPIHSIRNTEPITMDDVIIIGGSFAGLAAALQLGRARRKVTVLDTGLPRNRFAGHSHGLLGHDHKPPLDILAEARQQLARYPTITLVSARADSISGAIDNFSVRTGDGENLGARRLILSYGIVDQMPDIPGFAEGWGSAIVPCPYCDGFEVAGQHWGLVWSGRQSHNQVRLFHDWTDRLTVFADGHDIPPDIRADLARRNVPVVEGRITGIAHNGRHSATVTLDRGPNAAVDILFAHPRNKPSASLHESLGLATVDTPLGVVLKVDERRETTIPGIYAAGDLTNPLLPSVTTASWQGAMAGIFAQQSMLA*	mmseqs_cdd	nonviral_gene	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0061	persistent	direct	high	1019	0.999	GCA_012972105.1_04547
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4622056	4622706	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	44646	45296	GCA_012972105_1_1_4503	GCA_012972105_1_1_4503	+	6530396	.	COG1309	DNA-binding transcriptional regulator, AcrR family [Transcription]. 	MTEKNSQARRGRPANEALGQTIVDAAGELFVELGFQATTLDKVAQRAKISKLSIYRHFENKEALFGAAIAAHCHRFAPQALIEGVDGSAEDQLMAVGSSLLRTLLSPDVRSVEAMIMADKTNQKSLGRLHYEAGPAYVITQIEALLRQLHAKAVLNVPDPPRSARLFAALFKGCDLLTIARFDEERAEDDNEIESYCRSAVAMFIAAHGGNDHAGG*	mmseqs_cdd	nonviral_gene	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0062	persistent	direct	high	650	0.998	GCA_012972105.1_04548
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4622718	4623362	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	45308	45952	GCA_012972105_1_1_4504	GCA_012972105_1_1_4504	-	6530396	.	cd09892	N-Utilization Substance G (NusG) N-terminal domain in the NusG Specialized Paralog (SP), RfaH. RfaH is an operon-specific virulence regulator, thought to have arisen from an early duplication of N-Utilization Substance G (NusG). Paralogs of eubacterial NusG, NusG SP (Specialized Paralog of NusG), are more diverse and often found as the first ORF in operons encoding secreted proteins and LPS biosynthesis genes. NusG SP family members are operon-specific transcriptional antitermination factors. NusG is essential in Escherichia coli and is associated with RNA polymerase elongation and Rho-termination in bacteria. In contrast, RfaH is a non-essential protein that controls expression of operons containing an ops (operon polarity suppressor) element in their transcribed DNA. RfaH and NusG are different in their response to Rho-dependent terminators and regulatory targets. The NusG N-terminal (NGN) domain is quite similar in all NusG orthologs, but its C-terminal domains and the linker that separate these two domains are different. The domain organization of NusG and its homologs suggest that the common properties of NusG and RfaH are due to their similar NGN domains.	MSNSANWFIARIGMGGAKAAKDRIGTPEERKGEIVAERSIRDAGFECYYPRMRKEIIHHRTNVRIVRRFPLFTGYIFVALPSANGEYLKDCDGLGRLLSYEGEFGKPWQVPTGAVEGYMRAEAELEFDDTKESRIKRKLEGKTRRETIAMTFPEGQAIRVKQDWQNKHMFAGFHGEVVNVTGRGTVKSMIELFGRLVAAEFEADDLEPYPSRAA*	mmseqs_cdd	nonviral_gene	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0063	persistent	direct	high	644	0.998	GCA_012972105.1_04549
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4623359	4623994	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	45949	46584	GCA_012972105_1_1_4505	GCA_012972105_1_1_4505	-	6530396	.	.	hypothetical protein	MHDLVAKNDFDRLPEKYRDRARAIKARVAEIDGLMLPCQPQDVRAAVVRMAGQFRDQPDIDHADMAGEFLAACRDLPPWAVSEAASDFLAGRVDNHTGQFMPTCAEFAKRARAIMMPFLSERAALRTEASKLIERAADDHKRHLIEMERQDPAVRKRVASLAEAVTAGAPKGQVLPHLGLNEVEQRRLDALKRPRPEISKLEQTKIVKGRS*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0064	persistent	direct	high	635	0.998	GCA_012972105.1_04550
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4623987	4624469	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	46577	47059	GCA_012972105_1_1_4506	GCA_012972105_1_1_4506	-	6530396	.	COG3756	Uncharacterized conserved protein YdaU, DUF1376 family [Function unknown]. 	MSKRLPYMPLWVDDYQRDTRHLTTEEHGAYLLLLMAAWASPTNSLPDDDDMLARVAGVSLARWRKMKAIVMAFWSLDGRSKRWAQKRLKKERRLAVDRKAKASNAAASRWKDKKKDDAQAMLGQCHPSITIKEKPNGFSQRAGAPKKSRKQKIEEAFADA*	mmseqs_cdd	nonviral_gene	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0065	persistent	direct	high	482	0.998	GCA_012972105.1_04551
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4624466	4624687	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	47056	47277	GCA_012972105_1_1_4507	GCA_012972105_1_1_4507	-	6530396	.	.	hypothetical protein	MKTSCPHCHGVFEDGRAGAAYLRDEQALAAIVMWGSGQLDTADIAKALQCREDAVYRTLQIAKDGARSDRRAG*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0066	persistent	direct	high	221	0.995	GCA_012972105.1_04552
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4624684	4625472	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	47274	48062	GCA_012972105_1_1_4508	GCA_012972105_1_1_4508	-	6530396	.	PFAM:PF01702.17	queuine-tRNA-ribosyltransferase	MTVRFYVGLHQPADAQHFDFCCISINRVRGRKAPVPGRVLIDSGAFTELNLYGGYRHGVEEYAAELYRLYTQGVINIVAAVAQDYMCEPFMLAKTGLAVGDHQRLTIERYDALVAELDNLFGGKCPFPVMPVLQGYLPSDYVRHTRMYGNRLKPGMWVGVGSVCKRNGNPKAIVNVLSAVHSALPGLLLHGFGVKQTSLQHPGVRCLLHSADSMAWSFAARKQGRDGNCWREAKAFADSIGASAAKVGEWWQTVLPLWRLAP*	phrogs_hmm	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0067	persistent	direct	high	788	0.999	GCA_012972105.1_04553
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4625469	4625690	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	48059	48280	GCA_012972105_1_1_4509	GCA_012972105_1_1_4509	-	6530396	.	.	hypothetical protein	MISAGQPITYDVKLSTVRALIAGKQDWLSRFASGKAKRPDHEIDQKRTELLVLGTIAEDYERAVEVTKARAAQ*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0068	persistent	direct	high	221	0.995	GCA_012972105.1_04554
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4625687	4626292	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	48277	48882	GCA_012972105_1_1_4510	GCA_012972105_1_1_4510	-	6530396	.	PF07750.11	GcrA cell cycle regulator	MTGYTQSEIDSIAVWLREGDSASKAAGKLSAMRGRAVSRNAIIGIVHRNKTLSGIGFANATKGRARPRKQGLAPAEVRPRPDPKPKAKPTRGSTKHPAPYQLPGRLFIAAIEEIDREGEAFRHKSPATGRAPKVRQAHFAAMRFVDCLPDRCRAPLSSDLEEKPGPDMLCCGFLVELGKPYCAYHEVRLTNREHDFIAEAA*	hhsuite_tools	nonviral_gene	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0069	persistent	direct	high	605	0.998	GCA_012972105.1_04555
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4626289	4626546	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	48879	49136	GCA_012972105_1_1_4511	GCA_012972105_1_1_4511	-	6530396	.	.	hypothetical protein	MPAFQHAGRMTDAATVARDALNRTVVGMAHFAGSGPSGSSCSACDHWVTNRNKMICDKYRQLTGDDRKEVPSGTPCCRYFVARPK*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0070	persistent	direct	high	257	0.996	GCA_012972105.1_04556
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4627115	4627264	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	49705	49854	GCA_012972105_1_1_4512	GCA_012972105_1_1_4512	-	6530396	.	.	hypothetical protein	MSASFVITCTCDGTWTGRDHQTGASATGATRSNAEAELRRLIAMAREAA*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0071	persistent	ambiguous	low	3	0.02	GCA_012972105.1_04557
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4627261	4627446	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	49851	50036	GCA_012972105_1_1_4513	GCA_012972105_1_1_4513	-	6530396	.	.	hypothetical protein	MTCLAIFLYAAGSLLAVQYSHEIGEGRLSIGTVALALFWPVTIPFVWCWGIVETVIEAVRS*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0072	persistent	direct	high	185	0.995	GCA_012972105.1_04557
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4627443	4628270	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	50033	50860	GCA_012972105_1_1_4514	GCA_012972105_1_1_4514	-	6530396	.	COG3750	Uncharacterized conserved protein, UPF0335 family [Function unknown]. 	MTDITETSQTVAAGQLRAFVDRILRLKEEQDTIGDDIKEVYAELKGCGFDRTAVGSLVAELRKKAKTGIQEFEERNSILDLYRLAYEDACKPQAHARARTRENIEEFPADKRADGGAKIAAKHQSTATELPPHDAETGEIIEQNSSDLTSSPEKTNTAGAEPPPSAPATNSEIPDHATSGAADGQPSKPSSEAARAKSDGPQKTVIGQEGPVRGHSEQAVTNSDADIPAFLKKAPSPAPNPDCQKPQSCRWSHSQASCAKCANDAAIARQRGRAA*	mmseqs_cdd	nonviral_gene	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0073	persistent	direct	high	827	0.999	GCA_012972105.1_04558
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4628524	4628898	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	51114	51488	GCA_012972105_1_1_4515	GCA_012972105_1_1_4515	+	6530396	.	PFAM:PF10078.8	transcriptional-repressor	MELHERLAAARKQAGYDTAVEAAEAVGVPYGTYSGHENGSSGFRADKGEIYAKKFKVRFEWLMRGTGPMVDLASKYRELLTTFDSLPPDLQANYAEILRNLAKPFQQQEPDQAQPPAKAKSASK*	phrogs_hmm	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0074	persistent	direct	moderate	368	0.981	GCA_012972105.1_04559
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4629087	4629227	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	51677	51817	GCA_012972105_1_1_4516	GCA_012972105_1_1_4516	-	6530396	.	.	hypothetical protein	MNARYVDQSFIAGKEADGPRQANSTNHAINLRSERAIRKPVSGRTR*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0075	persistent	direct	high	140	0.993	GCA_012972105.1_04560
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4629432	4629965	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	52022	52555	GCA_012972105_1_1_4517	GCA_012972105_1_1_4517	+	6530396	.	.	hypothetical protein	MATHFSSATRRTYWLSVGVAFITDAVVAYLLAAFFGWDKITAVAMGGVFLVGAYTFQAFYGFLSFVRYALFFFAFEKDARIKTSVTQFEAARMPAPRSFYVNPSEYLLEVVNAPDSPSQARLLSGATLGGIETLRATNHAFLAICASIVLEKAVEIYSQRFGLVQGLPKHSENIEEG*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0076	persistent	direct	high	533	0.998	GCA_012972105.1_04561
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4630138	4630353	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	52728	52943	GCA_012972105_1_1_4518	GCA_012972105_1_1_4518	+	6530396	.	.	hypothetical protein	MNAHLRQAIAESADFRIVTKIFGGILGPEYTVAAGGRYYRVGQLTLDQLKRGIPAADLDLLEVDPETDEAL*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0077	persistent	direct	high	215	0.995	GCA_012972105.1_04562
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4630353	4630619	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	52943	53209	GCA_012972105_1_1_4519	GCA_012972105_1_1_4519	+	6530396	.	.	hypothetical protein	MNALSFRDVFSIVHNLDLSDLEQAGVINPGANCGSDWRRFNDDFGTFVLKLPSARLDKLIGLIEARRPKATPVAVTFFDFEDRSGEAC*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0078	persistent	direct	high	266	0.996	GCA_012972105.1_04563
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4630619	4630723	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	53209	53313	GCA_012972105_1_1_4520	GCA_012972105_1_1_4520	+	6530396	.	.	hypothetical protein	MNAACDWLVHNPWIACLVICSVCIVAGRLDLVLP*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0079	persistent	direct	high	104	0.99	GCA_012972105.1_04564
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4630761	4630898	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	53351	53488	GCA_012972105_1_1_4521	GCA_012972105_1_1_4521	+	6530396	.	.	hypothetical protein	MLTARRWMHVCLNAGEYEEAKRLLAEAARCGRIADEIEQERKVAA*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0080	persistent	direct	high	137	0.993	GCA_012972105.1_04565
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4630895	4631419	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	53485	54009	GCA_012972105_1_1_4522	GCA_012972105_1_1_4522	+	6530396	.	PFAM:PF05565.10	resistance-protein	MNVDVSRGLRIEAEAAKRLLLQLREQGHSGDTDLAADIIEGQTSLHETIAAAIDQIDNLDVMVIGLKAKEEAFAGRRKAIEARAETLRAAIEQAMIAAEQINIPLPTATVFISKRKPALIVENEADIPSEFFVEQERPAPKLNKRALAAALATGRKVPGAALDNGSVSLSIRRK*	common_virus_hmm	common_virus	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0081	persistent	direct	high	524	0.998	GCA_012972105.1_04566
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4631419	4632435	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	54009	55025	GCA_012972105_1_1_4523	GCA_012972105_1_1_4523	+	6530396	.	PFAM:PF03837.13	RecT-protein	MNAITTYTHSPRQLALIQKTVAKGCNNDEFNLFVEVARAKGLDPFLGQIIPMIFSKGDANKRKMTIIISRDGQRVIAQRCGDYRPAEEPAAYEYDPALKGPTNPLGIVSTTVYLRKQDPKTAAWFKVAGQAYWDEFAPIKTDAEGGYDWVDTGETWPDTGKPKKKKVARGEVHEVLDNSGNWCRMPRLMIAKCAEMQALRAGWPEQFSGLYDEAEMDRAKVMDMAASEIVAHEQEENRLRLVAGNDAITMSWGDGWALENVPAGEFMDRCLAFIRESDHQTVIKWNSANRAGLQLFWAKHPGDALELKKAIEKASRAPVEIDHATARRELAQHPVSAG*	common_virus_hmm	common_virus	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0082	persistent	direct	high	1016	0.999	GCA_012972105.1_04567
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4632501	4633013	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	55091	55603	GCA_012972105_1_1_4524	GCA_012972105_1_1_4524	+	6530396	.	PFAM:PF07105.10	NinB/-Orf-homologous-recombination-mediator	MTDAPITMRWDGEAMVPVSQFWAERADKAFVVGEVYRIVEHHDRSANSHRHYFACVHAAWQNLPDQLIEIYPTADHLRKKALIRKGYRDEREYVCASKAAALDLVRTIRPLDDYAIIEARENVVRIWTAKSQSVPAMGAKAFQESKQAVLDFLDDLLGVERGATAKSEAA*	phrogs_hmm	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0083	persistent	direct	high	512	0.998	GCA_012972105.1_04568
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4633037	4633429	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	55627	56019	GCA_012972105_1_1_4525	GCA_012972105_1_1_4525	+	6530396	.	COG1403	5-methylcytosine-specific restriction endonuclease McrA [Defense mechanisms]. 	MPMIDDPNGGRSVKEWIGKTPDSVPPPTVRARIFLRANGICHISQRAIGAGEKWELEHIKPLSLGGENRESNLRPALVDPHRAKSADENALREKADRVRAKHLGVYPKSKAPIRSRGFAATRDGVERRKR*	mmseqs_cdd	common_virus	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0084	persistent	direct	high	392	0.997	GCA_012972105.1_04569
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4633426	4633656	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	56016	56246	GCA_012972105_1_1_4526	GCA_012972105_1_1_4526	+	6530396	.	.	hypothetical protein	MTRALALSQRQAQTLLRAAEAERGIVEVKIGSAVFRLIPASIAQAPKAVDDDVSPEAFDTLDEYLAWRDRSGAGGA*	.	hypothetical_protein	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0085	persistent	direct	high	230	0.996	GCA_012972105.1_04570
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4633646	4634671	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	56236	57261	GCA_012972105_1_1_4527	GCA_012972105_1_1_4527	+	6530396	.	PDB:1Z19_B	Integrase	MALKGIHKVKRKLADGSTRVYHYAWRGGPKIEAKPHTEAFALEYAKLKALATPKIVETLETLIDRFTGPEEKRNPDFLALADTTQTDHLYAFRLIKEKWPKLPVRLTQQKGMKAEIRKWHRSFAANPRKADKLLFSLSKVFSYAVADELIDKNPCTGIERLYNGSRRESVWSQEQIKAFRAGAPAHLLLAFEMALHTGQRQGDLLVLSWKDYDGIYLQFRQSKGGKRLKVRVHSTLKAMLDPLDKDKLRILLNSRKRPWTKDGFKTSWGKECSRLKIGAVTFHDLRGTFITERAREGSSVENIAKISGHSISEIKSVLEKHYLADDQDASDAVILRMERNP*	common_virus_hmm	common_virus	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0086	persistent	direct	high	1025	0.999	GCA_012972105.1_04571
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4634882	4635187	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	57472	57777	GCA_012972105_1_1_4528	GCA_012972105_1_1_4528	-	6530396	.	pfam04800	ETC complex I subunit conserved region. Family of pankaryotic NADH-ubiquinone oxidoreductase subunits (EC:1.6.5.3) (EC:1.6.99.3) from complex I of the electron transport chain initially identified in Neurospora crassa as a 21 kDa protein.	MSARIFSPAKTAMQSGKAKTGQWVLEFDPEMRKKIDPLMGYTTSGDMRSEIRLTFETREEAVAYAEKEGLAFRVEEPKETKRRQISYAENFRYDRRTPWTH*	mmseqs_cdd	nonviral_gene	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0087	persistent	direct	high	305	0.997	GCA_012972105.1_04573
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	CDS	4635411	4636277	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	58001	58867	GCA_012972105_1_1_4529	GCA_012972105_1_1_4529	-	6530396	.	cd05231	NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs. Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	MYAITGITGKVGGAMARALLAAGQPVRAIVRDATKGRQWAALGCDVAIATMEDAEALTQAFKGATAVFILPPPVFDPEPFYPEAQAVIDSVATALRAAKPARVVCLSTVGADAVQDNLLSQHTKMETALSALPLALTLLRPAWFLDNVAWDVSSARGAGLIHSFLAPTGRALPMVAAEDVGRVAATLIQQDWSGTRIVELEGPERVSPDDLAAAFTTVLGKPVRAVPVPRETWEALFRSQGMRNPQPRMRMLDGFNEGWIAFADEARTIKATISATTVVQALVAGEGA*	mmseqs_cdd	nonviral_gene	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_CDS_0088	persistent	direct	high	866	0.999	GCA_012972105.1_04575
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	tRNA	4635313	4635389	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	57903	57979	tRNA-Pro	tRNA-Pro	+	6530396	.	tRNAscan-SE score: 70.3	Pro	NA	tRNAscan-SE	.	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_tRNA_0003	.	.	.	.	.	.
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	tRNA	4634762	4634835	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	57352	57425	tRNA-Arg	tRNA-Arg	-	6530396	.	tRNAscan-SE score: 77.4	Arg	NA	tRNAscan-SE	.	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote	cenote	tRNA	4580340	4580443	GCA_012972105.1	CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105.1_CP052769.1	GCA_012972105.1|CP052769.1	GCA_012972105_1_1	GCA_012972105_1_1@C232	2930	3033	tRNA-Arg	tRNA-Arg	-	6530396	.	tRNAscan-SE score: 28.7	Arg	NA	tRNAscan-SE	.	C232	58867	4577411	4636278	GCA_012972105.1|CP052769.1@region_4577412_4636278@tool_cenote_tRNA_0001	.	.	.	.	.	.