core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	167064	167687	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	1	624	GCA_012978915_1_2_164	GCA_012978915_1_2_164	-	222331	.	PDB:2FJR_A	Repressor-protein-CI	MASSNDKVVFENMKKYFGVDSLEDVAEKLGYSRSTAATWRSKGLTSTVKLKFVTLCADKVNKPQDKVATLRYFESVSASAGYGAQNDNENYTLIPVSRDFMEKVLKIPLKDYDVIKIYGDSMEPFAQNGDSVVIDLESEIRNGDIVIARIGEDLYMKKFLRNIVGKEIKLTSLNSFYQDIILRDEEINELKIIGKVWCKFNINMKIF*	common_virus_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0001	cloud	direct	high	623	0.998	GCA_012978915.1_00516
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	168331	168558	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	1268	1495	GCA_012978915_1_2_165	GCA_012978915_1_2_165	+	222331	.	TIGR04111	phage-associated protein, BcepMu gp16 family. Members of this protein family occur in Burkholderia phage BcepMu, Pseudomonas phage B3, and Burkholderia phage KS10, and many bacterial putative prophage regions. The member from Burkholderia phage BcepMu is named gp16. Homology suggests DNA-binding activity. [Mobile and extrachromosomal element functions, Prophage functions]	MIKRYFIENCISIRQWAKKHNLPQRMTYAVINGDVFGKYNTANGSAKRVFEALLTEGIIKELPEGLRQDNEEKAS*	mmseqs_cdd	nonviral_gene	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0002	cloud	direct	high	227	0.996	GCA_012978915.1_00518
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	168558	170594	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	1495	3531	GCA_012978915_1_2_166	GCA_012978915_1_2_166	+	222331	.	PDB:1BCO_A	Mu-Transposase	MIYVETQTASLVFGVSLSALKEATRRNSTKYPFLRLQDAGTRSRGGVKLLFEVEIADISSLVRAKKLSSDVEIYVPDSGAESKNGLKMMKFSEIKNTKTHSNDNNEQDEGDIYLEASEEELVEARRKRDIIKRYETSDLSSKKFCESESISEANLFRWQRAYKEQNLRGLLDRRGKKKGSHKLEEWMKDFILTKFRAYGAGDLNITQLWKELHFEYGKKTGKFSAPDFLQGKVTPLFDTGVISRFLKEYKAKNILDTIVSTKGIDKTISYLDPAHGTQGIFVTRRNQCWQIDSSKLDVIVRDGKGGVQVRPNILSIIDVFSGRCVATLAETSNALGITRLLWRAIEILGKPECIKGDNGKDYISKEFQDLLEGLGIDYDAARAYHGKDKAFVERHFGTIQRSKMAHTPGYIGGSVAKRENIEQQTPKKERHAKDEYGWLKKTNQKHLLTYDDMKKRFETAVLEWDITAVKRKKNSPIQRWNSDDTPLKTIEYERFLLFAGSKGIHKVGKKGITIDKITYVSRMLPDVRTEVRVSVNIDNVSEAFIYTLDGEFICKATDSSLMQLRADEFKITNRLFNDRLKAVRKGVNQAKLSEFTKLNVDYDLAQMQAAHQEALKKENKIIESSNIDSIKEAIAQQEAVSEITSAKFDYSKFEMTGEVKKNSKKSVLDMAIERASGE*	common_virus_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0003	cloud	direct	high	2036	1.0	GCA_012978915.1_00519
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	170671	171600	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	3608	4537	GCA_012978915_1_2_167	GCA_012978915_1_2_167	+	222331	.	COG2842	Bacteriophage DNA transposition protein, AAA+ family ATPase  [Mobilome: prophages, transposons]. 	MELASKISEFIKANEKDGMSQNRFAAALGINPAYISGYLKEGSNYKYADKVEEPAKNYIDNFIKKVDVVQDELPFIKTKDAKSIHAVINWAVRDRDMAMISGVAGSGKTRAIKEYVKTHPDSILIEATINTSAKSLFKILAHELGINDKGSIDDLVRQSGEVLKKVSKTIIIDEAEHLPYRALESLRRVHDFSRATLVLVGTNKLLLNLTSSKSGNELEQLSSRVGNKWILSGLCYVGDEDKKVIQDLEAVCKVFGVSDKSDINLIERIARGNFRKTEKLLRRSKMLSEYANSPIDGNIIKEATKMLLI*	mmseqs_cdd	nonviral_gene	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0004	cloud	direct	high	929	0.999	GCA_012978915.1_00520
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	171611	171847	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	4548	4784	GCA_012978915_1_2_168	GCA_012978915_1_2_168	+	222331	.	.	hypothetical protein	MRIEQTQARKLNEIVNFVSSMTRKGFEIAFSQSGAPFGVKRSSLIRGVRANYSNAYFKAVGEFIVRLDNGLVVDMVAR*	.	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0005	cloud	direct	high	236	0.996	GCA_012978915.1_00521
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	171914	172255	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	4851	5192	GCA_012978915_1_2_169	GCA_012978915_1_2_169	+	222331	.	PFAM:PF09152.9	nucleoside-2-deoxyribosyltransferase	MRSARLVFVSTPYASIECKDRDRNYYARQFALEACSIVRQNGYEPISPVLAFMDVYSELEREEVMKVCFELLSVCSYYYFHNCKFSDKSHGMQEERDYARELGITELKFSLFE*	phrogs_hmm	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0006	cloud	direct	high	341	0.997	GCA_012978915.1_00522
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	172371	172910	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	5308	5847	GCA_012978915_1_2_170	GCA_012978915_1_2_170	+	222331	.	.	hypothetical protein	MTLEESVKQQIKIMQAFIDGKDVQFREKGDTRDDWSDHTDDGWNFDFFEYRIKPDFKPKTCRFKTGDMVFKRSFEDKSIAKKGGTLITEEMIYNYEKGKSFYQPGNDLNEDYFLEDELLWYWEYIGISGVWCHTTMRETKQDFIDFLRGRAHPGSMIKRIVPLYMLGFRIPNNKNSNEE*	.	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0007	cloud	direct	high	539	0.998	GCA_012978915.1_00523
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	172914	173402	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	5851	6339	GCA_012978915_1_2_171	GCA_012978915_1_2_171	+	222331	.	PFAM:PF07352.11	Mu-Gam-like-end-protection	MQINSFGDIDNALKRVCELSVGIEKINGEVTLECNRIKESRKSEVERLENEKNFIEQQITIFCEDNKAEFAEKRSKEFTFGTIGYRISKSVSIPRVAAKLESLLNAIKAFGLGKECISYEEKPNKEALAELDDADLARLGLKRVVKDNFRIQPKLESLQVQN*	phrogs_hmm	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0008	cloud	direct	high	488	0.998	GCA_012978915.1_00524
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	173501	173722	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	6438	6659	GCA_012978915_1_2_172	GCA_012978915_1_2_172	+	222331	.	.	hypothetical protein	MDYFKTGGATYKFKEKYYASNNVKILLSHISKKYKLKRGCWYRINSKAYGYENLDRPGLICGLETTMNVEFIG*	.	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0009	cloud	direct	high	222	1.0	GCA_012978915.1_00525
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	173732	173935	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	6669	6872	GCA_012978915_1_2_173	GCA_012978915_1_2_173	+	222331	.	.	hypothetical protein	MTTKQRIHLDNLATKRKAEAMARLQNALSYDMGFYKFKNGKLNVSKLARCAGLSRAFIEREMWKKGL*	.	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0010	cloud	direct	high	203	0.995	GCA_012978915.1_00526
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	173932	174897	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	6869	7834	GCA_012978915_1_2_174	GCA_012978915_1_2_174	+	222331	.	PFAM:PF08423.10	DNA-primase/helicase	MMDNIFEFLKVSSLSKDSFNEKVEFLIDDFLVKELITLIYADGGTGKSYIAFALTKKLCEIGQKVFFIDYDNPVSVLKQRGIDKLLIEKFNNLSYIQRSQITLNGYELVLRLEESAVGKAYKNCVFVLDSLRDFTDVYNDNKINRLFEALKNLREAGATIIILHHSNKDGKNYQGSNHIRNSIDSMYHLIKRPSKENELNFLLEVQKERAGIKDIGFSIDTLNLKLSSLDIDVARMNEYEINFTSSALKILAQGDMNKTELLNAMGYEKDDKTARDCLDNFEGNLWVSTKSGKSIVYSSKKEATTITTDTTIVEDSLFLAV*	phrogs_hmm	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0011	cloud	direct	high	965	0.999	GCA_012978915.1_00527
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	174935	175441	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	7872	8378	GCA_012978915_1_2_175	GCA_012978915_1_2_175	+	222331	.	PF06252.12	Protein of unknown function (DUF1018)	MNKTTELKNYYIKMIHTLKHNYFIDDECRKIYLKSVYNKESLSDLTINELREVLTVCGYKPYKKYTPSYKKARSKTDNQGQVASIASGINETVPIKDGLHATKRQLETITGIWEQIARNKSPMALREFIFRIVKIRPLHLKSLSRDDARDVVQALIQMKEKHANSDNK*	hhsuite_tools	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0012	cloud	direct	high	506	0.998	GCA_012978915.1_00528
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	175419	175709	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	8356	8646	GCA_012978915_1_2_176	GCA_012978915_1_2_176	+	222331	.	PFAM:PF08765.10	late-transcriptional-activator	MQTATINNFDLFVEFYNKVKESSDISEIIKEYGGANIYIPSYKATFRNQDILRQYDEGIRAGKNSSVVIRELAQAHNLSYNTISSITKEAREPSLF*	phrogs_hmm	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0013	cloud	direct	high	290	0.997	GCA_012978915.1_00529
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	175767	176234	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	8704	9171	GCA_012978915_1_2_177	GCA_012978915_1_2_177	+	222331	.	COG1525	Endonuclease YncB, thermonuclease family [Replication, recombination and repair]. 	MFKFILPLLTLVTFCLADYQAKVIGVSDGDTIKVLADGNKVVKIRLHGIDAPEKKQAFGRVAKNTLSSKIAGKIINIVPTGKDRYKRELAKIYLDNEDINRYLVRNGYAWAFVKYSKDYIFDENYARAHKLGLWQDISPTPPWDFRKAKKKHKIK*	mmseqs_cdd	nonviral_gene	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0014	cloud	direct	high	467	0.998	GCA_012978915.1_00530
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	176235	176810	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	9172	9747	GCA_012978915_1_2_178	GCA_012978915_1_2_178	-	222331	.	PFAM:PF05069.12	Virion-morphogenesis-family	MIEVKGLEAIEVKLKKLQDIGTNTKPLMQTLGNILQNEIEDAFENETSPFGERWKPLSAVTAFSYYGGGGIKNLAKGAKASFIKSGKRQSKPFLNKFGAGGSKKILRDTGALADRWITKADKNKVSVSNNTQFHFFKYGLTHQYGTNNAFGRGIKIPARPFLPVDKSGRLPDKTKRAIEDATIEFITERLK*	hallmark_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0015	cloud	direct	high	575	0.998	GCA_012978915.1_00531
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	176941	178209	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	9878	11146	GCA_012978915_1_2_179	GCA_012978915_1_2_179	-	222331	.	PFAM:PF04233.13	minor-capsid-component	MKSSDLGFSFFDEPTAVYEYMAGKKPEIHFDYDEIMHDAHKKTFTIAKMTNLDLLKDMQGSLTKAFKEGIGFEEWKQGVKPMLAKKGWLGNVRVKDPNTGEEKEIYVGHRRLKTIYDTNMRTAYAKARYESQMQSLGEYFRYTAVLDGRTRASHRRLHGKTLPKTDPFWDTNYPPNGWNCRCKVQVLTKAECKARGITPLADGSFLPKAAEKDFAYNPGKVEKIDEIFKDKKDAALQSLTSPKAKKALQELLKEFEHERDIYVWQKGLEQAIDEIIVKDNQKVPINIFQVGFLSKILADLASKILNKSIESGGIVLTKKELTHASPKRKQAYQHAFRVEEMKRIVEVLQDEDKAYVDLREGKNNIVFIFDDEADETRLNLIPIEVSKTHKKFKVKNYVITLDKNIKEDILGAIKGGEIKKLK*	hallmark_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0016	cloud	direct	high	1268	0.999	GCA_012978915.1_00532
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	178196	179572	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	11133	12509	GCA_012978915_1_2_180	GCA_012978915_1_2_180	-	222331	.	PDB:5NGD_C	Portal-protein	MKFLNIFKNKNEIKSKRASIISANSTLIDLIMNTSVSSINDSDIDMILNDLTVTQCDVSRKAVTEKKEIQIITEDETLKKEFKNIFNPDVVSQVLETYLYGLNVFEINYKEKDGFIYPRLVQRDFRKFKFNDAGEFVFHGSGSEQEIPPFKVIYALNRANFKKQYGDGLLKKLYFPVKMKNASLKFWYRFLERFGSPWAIAKTSYDPDELAKEVDAMLSGDSAVIDKDEELELIQPTSNVDFSKLPNYFDNQISKAILGANLTSDVKEGSYAAAQTHNEIREDLAANDAKILVFVINRAIDFFKEINGFNGELSAKLFDEDAPNTERASRDKVLFDMGFVPTQKYIKDTYNIELDEEKTQNESLQAAKITANKTPLKIPLKAVKTGLPIDKFDKATDELEINDKQIELALNKFINESETYEEAFEKLYKLYDLPFDRLEEMMFRAIANAQMAGYYEEQ*	hallmark_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0017	cloud	direct	high	1376	0.999	GCA_012978915.1_00533
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	179569	181212	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	12506	14149	GCA_012978915_1_2_181	GCA_012978915_1_2_181	-	222331	.	PDB:4BIL_D	Large-Terminase	MLFSKDELDSFLEDKKDFYERQGVSEPELSKLTRKDFCEWLNELKDELKEQIHLNSILDPKQRSARLKRAEFDFEYFAKTYFPHYFTITGKCELHEDLARTFEEITLNPTGKKYARAAPRGHAKTTYCSQLFPLWCICFGKKHFIVEISDAVELVEGCLEAIKAELEDNANLKADFPQVCGMSKNWKIGEFVSKNGVKIKAFGSGKRLRGVKFGIYRPDLAVLDDLENDTNVRSKDQRDKLEAWLDEAVLNLGSVDGSLDVLYIGTILHADSVLARKLKLKFWNAKKYQSIISFPKRMDLWEEWANLYRNVSVAASDEFYMRRKNLMDEGSQVLWEEALPILKLMQKRAENLKSFNKEQQNDPRSEAQIFTKESLHFYKELPRIDYFVMYIDPAGEKKKSDFTAITVLGVSKSEQKIYIAESIVEVMKTKKAIKKIIELNQIYRCRICAIETNGGQEFFRQWIREKAFEAGAKLPLKGVNNVANKGLRIEELEVPIDDGEIVFHKSQTLLIEQLIEYPEAKHDDAPDSLAGAYNLTKLTKKIQRRHR*	hallmark_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0018	cloud	direct	high	1643	0.999	GCA_012978915.1_00534
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	181221	181715	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	14158	14652	GCA_012978915_1_2_182	GCA_012978915_1_2_182	-	222331	.	PDB:4IDH_A	Large-Terminase	MGENNTTIKIKELAKELYLKGFCIERIAEILNKSIKTIKNYKTNDGKWDEAKTAAYLSGSGEEKQNIYQNFIEEMRLAVRDIRESELSASEKARALSKIGDSFVKMSKVASYEDPAAYRLSIAKKVITLVVQKFKDDENKECIKKLIELIESEKFIKAIEELDV*	hallmark_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0019	cloud	direct	high	494	0.998	GCA_012978915.1_00535
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	181725	182120	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	14662	15057	GCA_012978915_1_2_183	GCA_012978915_1_2_183	-	222331	.	CDD:cd08053	head-to-tail-adaptor	MINNDDLLKEISNKELLELSDFEGSGQINQDVIDDSQNDALSYIASFILLPDNPTPLLKDIAVNLTIIELKKRNNFPKESLKEQIEKIDALLLKMAAKKIPTQIEDKSPPKMIIRAFKHKNKPLNLDELAT*	hallmark_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0020	cloud	direct	high	395	0.997	GCA_012978915.1_00536
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	182250	183221	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	15187	16158	GCA_012978915_1_2_184	GCA_012978915_1_2_184	-	222331	.	CDD:pfam03864	Major-Capsid-protein	MDELLNKFTIEKMTEIVNHAKADQSLITDTFFTKWTPTLSNSHDIIITKGEGIILESVSENGEHLVTKNDDETIISVPLPRFPQYSILPASEMNLLKTLNTEDDQVKSLAAMIGKKLARQKSNIINTIEYMAIGAIFGKVMDGKGNVLFSLSAARKKITITSAMSLLDLINNIDKEQANVLGQTKPYIALVTRELYAELLKKAEAAEMLKNQTAKVVDKNGVLALEIFGKAFVPYDATYKNSKGKPTSYMSGKQAVVVPQSSEMFEIVYTRANHTSAVGRAPTKFYAPTPEVLPMGAGWAIVSESRPIPICNRLDAIIELEMA*	hallmark_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0021	cloud	direct	high	971	0.999	GCA_012978915.1_00537
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	183223	183558	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	16160	16495	GCA_012978915_1_2_185	GCA_012978915_1_2_185	-	222331	.	.	hypothetical protein	MPTNEQIKPKTYGDVVVNKVLGVNAKVETTKALECGVVLFSINGGESFAPVTNDNQTATIANAAAVFGVLADNVSATSEADVLVLGEVKLSGVATELKTALFKQKIIIREV*	.	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0022	cloud	direct	high	335	0.997	GCA_012978915.1_00538
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	183558	184409	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	16495	17346	GCA_012978915_1_2_186	GCA_012978915_1_2_186	-	222331	.	pfam10123	Mu-like prophage I protein. Members of this family of proteins comprise various viral Mu-like prophage I proteins.	MLFQGRLYALKELKDKKEHEILLAVTGEWNGHHSGAFRVDKLDIQRMKENFDSRKIDLVVDYEHQSLWGGEAPAAGWITEVWSAKDDSELWGKVKWTDRALEYIKNEEYRYLSPVFNFSAVDQKTGANIGVRLESVALTNTPFLDELGEVKINKNFNQLIKEQNMAEKNPNMQPEGQGADNSAQYEAQIAELKNQLNASQTELESLRTQIAEAKVEAAIVANKIPISQKEWALGYAKANLAGFEEFLKGAVVPQQKLNLPNDMFENKNKGGEIDIVKYALGEE*	mmseqs_cdd	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0023	cloud	direct	high	851	0.999	GCA_012978915.1_00539
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	184412	184855	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	17349	17792	GCA_012978915_1_2_187	GCA_012978915_1_2_187	-	222331	.	.	hypothetical protein	MFVEFEKDLLATIKEICESTRPYLGEFENKDEMELLIKGGESFVFVEFASEKYDNVVARSATYNIHILACTSSKAQNYRQENKFKALSLCEKIDELLRNSNLANEFQIKPKSLKVRINNITDYGYVYVLTREIETEFLQKDEFLTGE*	.	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0024	cloud	direct	high	443	0.998	GCA_012978915.1_00540
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	185007	185447	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	17944	18384	GCA_012978915_1_2_188	GCA_012978915_1_2_188	+	222331	.	CDD:cd00735	lysozymes	MSLLSNIKENEGFDTHIYEDTRGYPTIGYGFKVSSLTRDELSLNGGKIEPMSREVADQILNLKIKKLKDEVFSAFSWLADKPKNVQDVVIEMCYQMGVPGVKKFVTTLYHIRVGEYRQAYQSGMNSLWAKQTPNRAKRVLNGLFNE*	common_virus_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0025	cloud	direct	high	440	0.998	GCA_012978915.1_00541
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	185428	185790	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	18365	18727	GCA_012978915_1_2_189	GCA_012978915_1_2_189	+	222331	.	.	hypothetical protein	MDFLTNKFLSIFGFGLAAFMGIICLNLFLENSKLESVNSLLSSELKVCNEKQERLTKDYATSANNLNACNAHIALQNEAIQAAQIKTEAKEPPAVAKVKKIYIENKSCEAELRAYKELFK*	.	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0026	cloud	direct	high	362	0.997	GCA_012978915.1_00542
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	186014	186220	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	18951	19157	GCA_012978915_1_2_190	GCA_012978915_1_2_190	+	222331	.	.	hypothetical protein	MKIVKLNLKRALVLLFGGVIVALFSILSYSVYECIFHNKDIVMTAWAVSLGVFNALLSPAKFLTFFKV*	.	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0027	cloud	direct	high	206	0.995	GCA_012978915.1_00544
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	186222	186533	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	19159	19470	GCA_012978915_1_2_191	GCA_012978915_1_2_191	+	222331	.	PFAM:PF05106.11	holin	MVESYLLYVLVVGIVGSIVGFAKSEAAGLKALGKRVLDGVFTAYVVYEIAFFYFHDLRYSLGICGIGAWMGSEGLLLAKDVAIEILTSFKKKSRGYDDRDRDY*	phrogs_hmm	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0028	cloud	direct	high	311	0.997	GCA_012978915.1_00545
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	186511	187122	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	19448	20059	GCA_012978915_1_2_192	GCA_012978915_1_2_192	+	222331	.	PDB:3VTO_Q	central-spike-protein	MIEIGIISEISNDRARVTIGSMVTDFLPVMQLANSFARSWTPIRVGEQCAVLPIRGSLNAGIILRGLYQNAHTTPSTDTNKQICIFEDGVKISYDVASSTLEISSPKQINITCEDANVKAKNVKVEATDTQIKSPSIKLLGNTLIEGSINTAGTGGGSGSFEINGNVKITGSISTGGDAKFGGSVSDSRGDLTNHTNNGLGRD*	hallmark_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0029	cloud	direct	high	611	0.998	GCA_012978915.1_00546
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	187125	187409	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	20062	20346	GCA_012978915_1_2_193	GCA_012978915_1_2_193	+	222331	.	PDB:5IW9_B	Baseplate-wedge-protein	MKYLASIEESIKDILLTPLGSRVMLPDYGSRIFELIDRKVDDEFRADLACYVIEAVERWEKRVKIDEVKLISLKDHRLNFKIVLTSGNEIGVEL*	hallmark_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0030	cloud	direct	high	284	0.996	GCA_012978915.1_00547
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	187406	188488	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	20343	21425	GCA_012978915_1_2_194	GCA_012978915_1_2_194	+	222331	.	CDD:COG3948	baseplate-assembly-protein	MNLSALPYPNVIEELNFNELLKGIKELFKNYLNDDEVSLLESDRYSALLETLAYRELLLRARINESVKAILLPYSTGADLDNVVAIYGIERLKGEKPTAEIELCLSIAKDSDTIVPAKSVFRSEKGDTATLKDSVIIKQGELKATGKIILDEFVKENSIKCELIQTPLPFVLKAKQTSKFSGGADKESDERLRERAVLSLERFSTAGSAKAYIYQALSANAKVEEVSVLNGGPGIVNVYLKTSDMSEATRQSVEDHLSGEKVRPLTDTVNVKNATIKDVEISAQLELTDMFLQDEIDKAIKSSRSSLSLGEDLNLSYIYSTLHKNGVYRVNLKTPAADIKVNDDSFIRLNFNLSYKKAEL*	hallmark_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0031	cloud	direct	high	1082	0.999	GCA_012978915.1_00548
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	188485	189039	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	21422	21976	GCA_012978915_1_2_195	GCA_012978915_1_2_195	+	222331	.	PFAM:PF09684.9	Tail-protein	MSLLPNHKSKLDKLLDELFGLRLGGLDISAINTLAGSCPASLLPILAASFDVDIDGLNETNARWLIKNAFKIHFYSGSFYAVKKAVQSVDSGAVIIEGNLSQKYDGSIRHDKNRFYGSNTHWAEYSIIASIPLSKQKAKQISEAAKSAAPARCVLVSIDHRASGVIYDGQIKYNDQFNYGAYNG*	hallmark_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0032	cloud	direct	high	554	0.998	GCA_012978915.1_00549
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	189032	190435	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	21969	23372	GCA_012978915_1_2_196	GCA_012978915_1_2_196	+	222331	.	PFAM:PF07484.11	Tail-Collar-Domain	MANLKEENKWEEGIYQLEVTDPVVGGIDGISNKQAKQLANRTKFLKENVDTLADGKLGREETAVDSQKLGGLTADKFAKLNEENTFTKSVTIGSEGIFYANNNDSHFLIAAKNKGQAIGLGTPKPDGAPVWHYFTHEGFRTDASVNAGVLKIKGVNTDEIYLKKDEASDGTPIGAYLAWSSQEKIPAGYLLCDGREISKTEYKELYEIIGDTYGTPSDTSKFKLPKFNDGRFMRGTGGNAAALGVLQEDAIRNMKGSLTGECFMWEGIADADGVFKNEGTAGRKGAQGQKDSHSPKVSFDASRVVPTANENRPLNSSVVFIIKAKNVREAKQSDIDKTPYATESKAGIIKIKNSITGVQEDVAVSEKAVVGIASIGINQTWQDVTSERQPNVTYTNTTGRSIFVLVRDASASANGRNYDFYVDDINICPGHGQNAYSILHLFAIIPPNSTYKATNVVMSATKWFELR*	hallmark_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0033	cloud	direct	high	1403	0.999	GCA_012978915.1_00550
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	190417	190767	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	23354	23704	GCA_012978915_1_2_197	GCA_012978915_1_2_197	+	222331	.	PFAM:PF02413.16	tail-fiber-assembly-protein	MVRAKIKESKMKYFKDKNNQIYALDDKDVVNFKKPEWSEISKDEVDRILNPAPTKEQLKQKELAELEAQIKETEELIRNALLIGNNAVLDELRAEYKELLNQKEILKGGAENEKEN*	phrogs_hmm	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0034	cloud	direct	moderate	320	0.912	GCA_012978915.1_00551
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	190751	190909	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	23688	23846	GCA_012978915_1_2_198	GCA_012978915_1_2_198	+	222331	.	.	hypothetical protein	MRKKIKRCNICSSRLDKNGDCPWSGCPKSPNYEKAAKEPEKPKENEAEKGKK*	.	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0035	cloud	direct	high	158	0.994	GCA_012978915.1_00552
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	190906	191511	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	23843	24448	GCA_012978915_1_2_199	GCA_012978915_1_2_199	+	222331	.	PDB:5O6V_E	Envelope-protein	MRISKKQICQVIKNIIIELPFEILVFFIVPIAVAFCKKEDEKLPKWAAWFDDPDYGINGDDGWKNEHFPGKERTYYARLRWLLRNRIGVFSVKFLGVRVRDIEPSSVITQGNPKVTSNGGIVSDWCLVSCKLKDGKERFGYYRTIRYGGFFRNFYCRIYLGWKLMDVAGMNEMNAGKYLEASDKPILKSVWAVNPFKKVKH*	hallmark_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0036	cloud	direct	high	605	0.998	GCA_012978915.1_00553
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	191646	192809	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	24583	25746	GCA_012978915_1_2_200	GCA_012978915_1_2_200	+	222331	.	PDB:3J9Q_C	sheath-tube	MSAKYGVNITISAEAARPIQVQTTTPIAIAGYEELLENGLHFFMTTDKAIDAITEKYEAKKKANQTFKKGSVYKALKAISDQAVQTPIILSVFTKDDDTDTNDEITECKAAIEALKNAKSKFGYRPNIIIAPEYSHEDAIKGAIEKMSERLKATGIIDLKADDAAGAITKMANFGSRRLIASYPNVKVWDDETNAYVYEGQSARMAGMIAHTDGSSEFGYADSYSNRVMIGVSGTQIDVDFELGETCTADELRAAHISTIIRESGFRAWGGETSDQDTIWQDLARVRIFDRISEACQKGVLFAIDRRADQLYHAKRSVDELLRSLVGAKVLIGYEISWSEKNTLANITAGKFYLDVRMQNNPIVKQLTLDFIYVDKYGENLLNDLNK*	hallmark_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0037	cloud	direct	high	1163	0.999	GCA_012978915.1_00554
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	192820	193332	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	25757	26269	GCA_012978915_1_2_201	GCA_012978915_1_2_201	+	222331	.	PFAM:PF04985.13	tail-tube-protein	MVKRQIPQVVQEANVYINGQGYLGVVKSLTIPKIEQEMVEMKGALSGNFASGSIKAVEMEFKLNILDKNMFLGYGLNTWKNRIPFLFKASIFQAGREPMPFSMAVTGDIIEIDPGSFESGKEMEVNVKLAVHFLDLNIDKIPMIVFDVENMICLIGGVDYLAKVRSNLSE*	hallmark_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0038	cloud	direct	high	512	0.998	GCA_012978915.1_00555
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	193347	193610	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	26284	26547	GCA_012978915_1_2_202	GCA_012978915_1_2_202	+	222331	.	PFAM:PF10109.8	tail-protein	MSKNVNNEISENNEKYKVVTLSDGTQIKIRYPKGKDLRFAMSGGNMNDADIIFRLASNLTCLSPDELDEMGAKDCSAILKEVGGFLA*	phrogs_hmm	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0039	cloud	direct	high	263	0.996	GCA_012978915.1_00556
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	193727	193972	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	26664	26909	GCA_012978915_1_2_203	GCA_012978915_1_2_203	-	222331	.	.	hypothetical protein	MKAINTYMKYRVKLYEYIIFSIAFALGFCVPMFSELDLMSRIFVALALMIATYPLTFFVLNIVLGIFDKVIREGLRTRTSL*	.	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0040	cloud	direct	high	245	0.996	GCA_012978915.1_00557
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	194012	196111	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	26949	29048	GCA_012978915_1_2_204	GCA_012978915_1_2_204	+	222331	.	PFAM:PF10145.8	minor-tail-protein	MQNEIFGISIGVAIKGIAEIIKLKGTFENLKKSIKDSNGNLKDFSRDLAKIRLADRKILKFKADRESLKRELLSVTELLLRGGAIVAPIKLAMDYESSMADVKKVVDFASKAEFNKFSNDLLGLSRSIPLSAQELATITASGGQLGIAKNDLMDFTKIVAKMGVAFDMSSADAGDSIASMMNVYSLGMKDVEKLGDTINHLSDNSAAKARDIVEAMKRIGGSAKVFGLSADEASALASSFIALGKPPQVAGTAINALLNKLQTAPKQGKAFQEALGKIGMDANYVKTMIQNNPQKALETFLSSLEGVNKNEKMSILTDLFGAEFSDDMALLVSSLDEYRKALKLSRDGAKNGSLDREFKNRSETTANSLQLLQNAVSELGINIGSVFLPAISKIAAALASFVNGIVNITSKVPGLTSVLGFLSAGFLLLKPVILAVKFASSYLKESWMIGMKTLAMMNIKIKQATVFLRNLNIIKRLSAVISNTYAAANRALAITFNFLKASIFTTAGAMKILRLALISTGIGALVVGIGMAAAWLIENWDKVKAWFSSFSDWLSKIFDPVVEWFKNIFGGFFDWIGEKFAWISDITSTVGDALGSAWKGTKEFFGFGDEEESKQEGKQNNEGFFSSMFGEKDTPQIKQTAKALATTGGNITINLNGGFNIATSEGRFDLNEFERALTQSVKRAIQRDQFNQANTEIRE*	hallmark_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0041	cloud	direct	high	2099	1.0	GCA_012978915.1_00558
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	196114	196488	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	29051	29425	GCA_012978915_1_2_205	GCA_012978915_1_2_205	+	222331	.	pfam06995	Phage P2 GpU. This family consists of several bacterial and phage proteins of around 130 residues in length which seem to be related to the bacteriophage P2 GpU protein, which is thought to be involved in tail assembly.	MVLNLGGFKFNWKQVGSIGIETEFGISSNERIANYEAIFRANLGSQTINIEGQTLPYRGDKQTALKRLYELANLSSSYPLTNGAGKYFGRFVITKISEKQAVFTTDGLFFTQTFTMELKRDYDL*	mmseqs_cdd	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0042	cloud	direct	high	374	0.997	GCA_012978915.1_00559
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	196478	196666	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	29415	29603	GCA_012978915_1_2_206	GCA_012978915_1_2_206	+	222331	.	pfam05489	Phage Tail Protein X. This domain is found in a family of phage tail proteins. Visual analysis suggests that it is related to pfam01476 (personal obs: C Yeats). The functional annotation of family members further confirms this hypothesis.	MIYKAKDNERLDTIVFKYYGHLRFFEQVLAVNPKLKPILKAGNVVILPEIKENLVKEQAKLW*	mmseqs_cdd	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0043	cloud	direct	high	188	0.995	GCA_012978915.1_00560
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	196660	197631	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	29597	30568	GCA_012978915_1_2_207	GCA_012978915_1_2_207	+	222331	.	PDB:3D37_A	Tail-protein	MVRKPNFKLIAKGTDITQTIRANLIEIGFDDKEGSKSDEISIKVNGIFAKPVFGDKLELFLGYGEDIYLCGSFSVQTATRDYKVNTTEVRATAVNFASPVKEKKRRSWENTTVFAIARKIASENNLSSKTTGDDQPIASRLQDNVGDLEFLYGLCFETGYKALVKNNTIVITPMDAKGDESQTSNTPRNENLPKFELSLNELFSLEITEANRNSYTAVILEWQDVSEGKTKSIKVGSGEQVYKMQIPQPKTDSEAFKQGESKLNELQRGGINGRCSLPGANIVAGGKLKFKGITGLENNEFTIKSVEHRLTSKDYTCEVEFEG*	common_virus_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0044	cloud	direct	high	971	0.999	GCA_012978915.1_00561
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	197667	198053	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	30604	30990	GCA_012978915_1_2_208	GCA_012978915_1_2_208	-	222331	.	PF15731.5	Antitoxin component of bacterial toxin-antitoxin system, MqsA	MTKKEFDDTLKRLSLSRQEFCKITGLAYSTVSNWNDEKLPLPSWVDSWLVNYERSSSYDEIKRRILKIECPKNSIILSIADTNEHIIVEKKEPKAGDKVVVMNDAQMSVKEYPTKGEIIGVVVQTLKK*	hhsuite_tools	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0045	cloud	direct	high	386	0.997	GCA_012978915.1_00562
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	198303	198611	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	31240	31548	GCA_012978915_1_2_209	GCA_012978915_1_2_209	+	222331	.	.	hypothetical protein	MQKNYYNKGEANIILAGIRSWAYSNRDTVSNTTLDRIEKFINTELSAEDREKVRLSDFDKWSFQYWINKKMGDTKGYARLLEIDVDISKLDDVIRGEEKEEI*	.	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0046	cloud	direct	high	308	0.997	GCA_012978915.1_00563
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	198608	199012	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	31545	31949	GCA_012978915_1_2_210	GCA_012978915_1_2_210	+	222331	.	.	hypothetical protein	MKDLNLLRDDELKQLICDATAVLESRKDGKKFVLETYGEFDPRKHGHAYLAKLNFKDGKIEREFIDCNGKQWDSKHKLYSTSWTFVAKEGDKFEGRLSDGSWKNDSKDYYIVAKNDAGELKLKGVKSLSALKEL*	.	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0047	cloud	direct	high	404	0.998	GCA_012978915.1_00564
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	199023	199898	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	31960	32835	GCA_012978915_1_2_211	GCA_012978915_1_2_211	+	222331	.	PDB:1Z19_B	Integrase	MTLSKIANLYLEDLSQVDLEKYKRKRGSFSHTEKLPKNIEEIKKSDLERWVAQMQKRLAPRTIKYIIAHWRQACEFCIERNLICTNPFLKAKHPMITRTNIEPFSEDEVKTMLTKANGWFECYLAFAFFTGARTCEILALQWNDIDMKNMTISISKSLRDGIVRNRTKTGISRVVPIFSCLVPYIEKLAKDRECDWVFSHNHDHLFGSDNISLNGRWKRFLESCGIEYRSARHTRHTFATHMVEKAIRGEFSMKCVAQILGHSSLKMTLDVYARFLEDEHLKIDRSLDIFK*	common_virus_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0048	cloud	direct	high	875	0.999	GCA_012978915.1_00565
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	200052	202055	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	32989	34992	GCA_012978915_1_2_212	GCA_012978915_1_2_212	+	222331	.	COG4191	Signal transduction histidine kinase regulating C4-dicarboxylate transport system  [Signal transduction mechanisms]. 	MNTKYIIIFFFPVFFIFYFYLIYANYKDNKEYVLNLTVSNQISMAQSYKTRIDERISNQKKLLEETAKFVRSKDADKDYDLIRDVLRILARTAGFSEVYVGYSDTNKVISSDKYDMIKYYSNYDVKRRPWHQIVKSKQQTSFTEPYIDTKLKKYVISIAVPIYKNNKLDNVLVGDFELDAFQKEMASFFPSKYGSAFLMTDGAKILDSTKQIIDYTDAYVEKILFAIYNKKQGSGRFLINGKKYIFVYDMIAYGEWISVSILEEDKIYENLNAKTLNNLLVFLFLMIFGVCISVWMYISQKRINDNKHFLSLFSKSSINGLVITDKNGEITFINKTFEKIFSLKFKEFIGKNISELFYLFNDVDIFEQVKSDTNKNILVKKNIRDCFYGIRVIPLLEKGDKFEGVMIVAYDMTHETQLEMNRQQQERILIENSKMAALGEMSSAISHQWRQPLNALLLLVSDIEAKIEQIRIQDNAKSEVLSRLGESRTNIELMDETINIFKNFYKESLQETKFNLLDIMDDILYICKPQIMIKGIHIQADYEIKDYEITSYSSYIKQVLLNLISNAKDELVKRKLLDENFKAYIKISIVEEETRYIINVEDNGAGVGDDIKEHIFEPFFTTKGKEGTGMGLYLCKLIFDKKINGDIILSHASNPTIFSVVLYKNGQ*	mmseqs_cdd	nonviral_gene	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0049	shell	direct	high	2003	1.0	GCA_012978915.1_00566
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	202045	202737	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	34982	35674	GCA_012978915_1_2_213	GCA_012978915_1_2_213	+	222331	.	COG4753	Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains [Signal transduction mechanisms, Transcription]. 	MDNKIFENLKDTNVLFVEDDENLKNIVKSLIAPYINEIYTAGNGEEGLELFNANKIDLIISDINMAHMSGISMAQEIRKIDPAVPIIFITAYDTDENLYNSISLKSSGFLKKPFDRRQLMISMLMAITNSQNLAKNTIDLKNGFIYDMNARILYKDGDVVVLTRTEQRFLYLLIKNIGRVVSFDAIESYVWNEKFASLDTIRNFINRIRSKIYPELIKNISGIGYKIDID*	mmseqs_cdd	nonviral_gene	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0050	shell	direct	high	693	1.0	GCA_012978915.1_00567
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	202734	203285	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	35671	36222	GCA_012978915_1_2_214	GCA_012978915_1_2_214	-	222331	.	pfam09624	Protein of unknown function (DUF2393). The function of this protein is unknown. It is always found as part of a two-gene operon with IPR013416, a protein that appears to span the membrane seven times. It has so far been found in the bacteria Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Rhizobium meliloti, and Gloeobacter violaceus.	MSLSYFTIVHIIVMLVIFLLSMLLLVLSMRAERKLFWSLLFINILVSTTLCVFLMLVLDKYTKKGSLENVTSERILINESIAFKGKVRNVGNFTLTHCTLSVRLVNRPQNRDGHFKEIFKPSGLTFFSSLFKSEDKDEKPNAVEYKFDVAQNLQKQRSVDFMVSMPYPPYFENVMHITKLSCY*	mmseqs_cdd	nonviral_gene	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0051	persistent	direct	high	551	0.998	GCA_012978915.1_00568
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	203285	203815	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	36222	36752	GCA_012978915_1_2_215	GCA_012978915_1_2_215	-	222331	.	PF09624.10	Protein of unknown function (DUF2393)	MISSIKQNIFFVLANAHFIDYLVYGWIFIAFIFILFLGIFFALKSWWQIGFLFIMADLFALLAGFYYANDALSQNLRPVEISAVNTKQLTYSNALMIDFNVTNRSKKMLNVCKIDLGFYTVSKQKSRDFLNSLNPFAKKTIVLREPFIPGEVKQIKDFVNEFSFIDYNITKKAECF*	hhsuite_tools	hypothetical_protein	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0052	persistent	direct	high	530	0.998	GCA_012978915.1_00569
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	203805	204530	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	36742	37467	GCA_012978915_1_2_216	GCA_012978915_1_2_216	-	222331	.	PRK02759	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE. 	MPDLHIDWQKVSGMLPVIVCEHGSNEILMLAYMNEEALDLSLKSGFAHYFSRTKNRIWKKGEESGNTQKIVSAKLDCDNDTLLISVVQNGGVACHTGRKSCFFNDINLQNFEISHAGDEISKPKYDVIDELYHIIMDRKLNADPKTSYVASLFKKGENSILKKVGEEATEFVMACKDASTHKSEDPGKNTKDALIYEAADLCFHSMVALALHDIHPDAVKEELKRRFGMSGIEEKRSRDDK*	mmseqs_cdd	nonviral_gene	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0053	persistent	direct	high	725	0.999	GCA_012978915.1_00570
GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote	cenote	CDS	204544	205638	GCA_012978915.1	LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915.1_LIWW01000002.1	GCA_012978915.1|LIWW01000002.1	GCA_012978915_1_2	GCA_012978915_1_2@C9	37481	38575	GCA_012978915_1_2_217	GCA_012978915_1_2_217	-	222331	.	CDD:cd03405	High-frequency-of-lysogenization-C-protein	MPADLNDYFNKRKPSGNDGDKEPKINFKAPKLPSGFGKFGTLAYIIIAIIAVLVITQPFVVINSGEVGIKATAGKYEPNPLQPGFHFFVPFIQKVIVVDTRVRLINYTSGEDMGESVQKSFQGSGAGIIRKNSISVLDARNLPVSIDITVQYRLNPENAPQTIASWGLSWESKIVDPVVRDVVRSIAGKYTAEELPTKRNEIATQIDDSIRKDIDAQPNRPVELLAVQLREIILPEKVKEQIERVQIAKQEAERTKYEVERANQEALKKAALAEGTAKAAIIEAKGKADAVKIEADAQAYANKEVAKSLDENLLSLKQIETQGKFNEALRDNTDAKIFLTPGGAVPNIWVDTKDKAKQSSATQR*	common_virus_hmm	common_virus	C9	38575	167064	205639	GCA_012978915.1|LIWW01000002.1@region_167065_205639@tool_cenote_CDS_0054	persistent	direct	high	1094	0.999	GCA_012978915.1_00571
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	46739	47422	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	1	684	GCA_012978915_1_9_43	GCA_012978915_1_9_43	-	78164	.	COG1583	CRISPR/Cas system endoribonuclease Cas6, RAMP superfamily [Defense mechanisms]. 	MLTINAKLPTRNLRVSKALPQLIQGFIYRYLPAEEHAGYRHEKTGKIFKRMNFDFYLSGADLRVRFTSYEPKFEKAVALGVLKDGLNLGKLCFVDTTVAVSEHRTSSDDVVLQGCVACAVQGLLGHKIYLQAQDSRHLEMMKANALQRFETLTEREYGGKFELNLKWQNLKKPFYFYYGNNQMPLIAWQAKWRVQAEPELINLILDAGVGSGCMNYGVGFLEVVIEG*	mmseqs_cdd	nonviral_gene	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0001	persistent	direct	high	683	0.999	GCA_012978915.1_01541
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	47590	49812	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	852	3074	GCA_012978915_1_9_44	GCA_012978915_1_9_44	+	78164	.	PRK14692	flagellar hook-associated protein FlgL. 	MRITNQLRFSQTLHDYQNSMAGVNKSYRQMSSGLKIQNPYENASVYNDAMRLDYEAETLSQVVEATSKSVNFSKNTDKSLQEFEKQLENFKTKVVQAASDVHSKTSLEALANELQGIKNHLVNIANTSINGQFLFSGSAVDTKPIDGNGKYQGNRDYMKTSAGAQIELPYNIPGHDLFLGKDNDYSKILTTNVSLTDNTKTDVSENPKYLTAQSKIKNMIGLNYANDSKNVDNQGKYAGSINPDYDFLDSSNINFPDTYFYMQGKKPDGTSFTSKFKMTAGASVESLMEKIGQEFGNTATTKVVDVSINNDGQFNIKDLTKGNQVIDFHMVAATSTATNKNAIAPNNALDGVNTLADLETMASTNPKTVHITEFTKSKFKDKDGNTVNSFDFDRVRFDKKDNKIIGTISQVVRKSGEYATDSTRLSEVAGIDKLYPKEQGKYNIDDRKLTMEIVSRNGTKYKVDIDLGHEEAPAQTAKFTISGTTSAGTPIAAQTFDIWHATEYGQFKTPTKDVTFRQINDIISMAASDNIPTANTYDNYNSAISLSKGAVEVNMNEKGKIELTDKTNAVSTIQVAAYDSTTNSDKFYGDSTGTTAATSQGRGSVFSFSENNAITIDEPSVNIFDDLDKMIEAVRQGYYRSNAENGDPRNTGMQGALERLDHLIDHANKELTKVGSQTKLITSTNERASLMKVNVLTVKNEVIDADYAEAYLNFTQKTLSYQAMLQASAKINQLSLLNYL*	mmseqs_cdd	nonviral_gene	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0002	persistent	direct	high	2222	1.0	GCA_012978915.1_01542
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	49941	52022	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	3203	5284	GCA_012978915_1_9_45	GCA_012978915_1_9_45	+	78164	.	PDB:4KFU_C	Genome-packaging-NTPase	MVYFGIATAAPTADFVGTFGRTIGLANLKFFGYAAYVYPFALIIFAYYVYRDFKDFDLEFSQVLLGILLFFLAFLMFQAMTMSPANSGIVGKFINDALKDVIGMIGTCVVILMIFTISLGLIFRENLIVVLKRAFVIPISAQNSTKIQPIQPRQRQIAKIERQKDKNSVADEETIDAQILACDDENLEQNGGQEAKISMVNGVEILNEVAENKKLLDEIEKGKVEKPKDFVLPPLKFLNDPPKRSHSVNEAEIDQKISDLLDKLRKFKIDGDVVRTYTGPIVTTFEFRPAPHIKVSKILTLQDDLAMALRAQTIRIQAPIPGKDVVGIEVPNQNLETIYLKEILESEIYKNASSPLTMALGKDIVGAPFITDLKKLPHLLIAGTTGSGKSVGINAMLLSLLYRNSPQTLRLMMIDPKMLEFSIYNDIPHLLTPVITQAKQAIIALSNMVAEMERRYTIMSHTRTKNIESYNEKMKAEGGEQFPYIVVIIDELADLMMTSGKDVELYIGRLAQMARASGIHLIVATQRPSVDVVTGLIKANLPSRISYRVGQRIDSKVILDQMGAESLLGRGDMLFTPPGSPGIIRLHAPFASEKEIENIVNFLKDQQEVIYDERFLAEDGSNASATGAAINAGELDELYEEAKEIVLSEQKTSISYLQRRLKIGYNKAANIIEQMEKMGVLSPVNAKGQREIL*	hallmark_hmm	common_virus	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0003	persistent	direct	high	2081	1.0	GCA_012978915.1_01543
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	52583	53278	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	5845	6540	GCA_012978915_1_9_46	GCA_012978915_1_9_46	-	78164	.	PDB:1Z19_B	Integrase	MRFLTHKTYVRDFQHWILPDFGDTALKDIRPLALDTWQNKLRQRVSNKRIYNIRSVFSMILKDAVMDELIKRNPFDSVPKLRNEKVEIKPLSLSEVQRVISVADPHFANVLKLAFFTGMRTGEMIALRWDKIDFEKETIRIDQAIRCGMLNPPKTQTSIRIIKMLRHVKEALLNLKQDNDSEWVLPTQNGTMLYEPKTLNRRWKEALKRAGLEYSVFYQTRHTFASLDDSC*	common_virus_hmm	common_virus	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0004	shell	direct	high	695	0.999	GCA_012978915.1_01546
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	53320	53625	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	6582	6887	GCA_012978915_1_9_47	GCA_012978915_1_9_47	-	78164	.	PF12167.8	Arm DNA-binding domain	MVCELRSDKQTKIQALVKSQSSNKQVVSDNKGDEMTNHAYIRGNMVWVDATFEGKRYRVSTNKKADKFNLAWANKHYIEIITRHIVSKKESEKRTRQETAN*	hhsuite_tools	hypothetical_protein	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0005	shell	direct	high	305	0.997	GCA_012978915.1_01547
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	53686	53814	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	6948	7076	GCA_012978915_1_9_48	GCA_012978915_1_9_48	-	78164	.	.	hypothetical protein	MQLNEIGEKLNKLLFEVMKNSSMLVTLADAARILDLSYSGGL*	.	hypothetical_protein	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0006	shell	direct	high	128	0.992	GCA_012978915.1_01548
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	53831	54238	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	7093	7500	GCA_012978915_1_9_49	GCA_012978915_1_9_49	-	78164	.	.	hypothetical protein	MNLAMDVTNKGDFNTFEMGLLSELISAVPNHRQSELAKMLFCDTDGLNRLRNGVITMPMVTHYVKKTLKREAKDRATIVYEDFRNGADIKLFSDKEMKEYDTLGIGDGFRQKIAERIYHNLASGVLECLDGATNK*	.	hypothetical_protein	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0007	shell	direct	high	407	0.998	GCA_012978915.1_01549
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	54443	55357	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	7705	8619	GCA_012978915_1_9_50	GCA_012978915_1_9_50	-	78164	.	PFAM:PF06970.10	replication-initiation-O-like	MAKSISKPERLEFDMTLSGRAKFFYSMLVKLSKNDDECCTASNQYLADKCGCSTKTIMRILSELEDGEYIGILYKNINNKSGRKIFTKIDLFLKYQKDIEVENPSDIFDVRMSHEMSDDYPITCNHVNLKENIKRKVEKNSKFDEQILDELKDIKKENPAHFKSKQKSVNQVNIFNVVLPKSVNPQMWADFVAMRKESKHPLTQTAAKAIVNKLSTFEAQGLDCNEILNTSICNSYRGIFAPVKQKVSNVGRGAEEISNYIRSKVMHENFDPVKAMREGIDELVDGRKVAFGSVGGRMRFYFVN*	phrogs_hmm	hypothetical_protein	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0008	shell	direct	high	914	0.999	GCA_012978915.1_01550
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	55361	55654	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	8623	8916	GCA_012978915_1_9_51	GCA_012978915_1_9_51	-	78164	.	.	hypothetical protein	MARLLAVPWRIVSDEARILFLHIAKIADDDEDDVCHASDEELASAMGVDSIKKPFEELKKARYMIVDETSEGRSLRLRYDVTLDFLEAAGYHEAVKG*	.	hypothetical_protein	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0009	shell	direct	high	293	0.997	GCA_012978915.1_01551
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	55932	56138	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	9194	9400	GCA_012978915_1_9_52	GCA_012978915_1_9_52	-	78164	.	.	hypothetical protein	MRGLMITLDDKRMLMEFGNITNFAKENDLNKDAVYALLKRHGKPTLFQPNSLIKQTYDKLRQMGYVIE*	.	hypothetical_protein	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0010	shell	direct	high	206	0.995	GCA_012978915.1_01552
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	56264	56650	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	9526	9912	GCA_012978915_1_9_53	GCA_012978915_1_9_53	+	78164	.	PFAM:PF10078.8	transcriptional-repressor	MKYSEAILAALRREVNAKNNKELSEILGIGYRNFNNWQTRGRIPTGRLYEIAQKLGVDLDILINGNINGGNNIIFRGDGNTIRGAEKIDDEILAEFCELYKQYRTPMVEGELITLIDRLKKIKKAQEE*	phrogs_hmm	hypothetical_protein	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0011	shell	direct	high	386	0.997	GCA_012978915.1_01553
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	56659	57105	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	9921	10367	GCA_012978915_1_9_54	GCA_012978915_1_9_54	+	78164	.	.	hypothetical protein	MSFRNKLIKKIDLEYDEVFSNDWEISNQGYEDYQRIREKILEKINWVNKEKKVIYHVFLAFFVYFVLFLIIFCGFLELSSTGFVLSFLFAWQKGINRDIDRSSASDQYTAVLLRWLERVDSDFIEKLHAEHVKIKEEVTHFKKSTKTD*	.	hypothetical_protein	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0012	shell	direct	high	446	0.998	GCA_012978915.1_01554
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	57158	57379	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	10420	10641	GCA_012978915_1_9_55	GCA_012978915_1_9_55	+	78164	.	.	hypothetical protein	MKKLFIFVFIIVLLAPTFALAYGSHSVGGHIRKNGSCVAPHYRTNRDKTKLNNYSTKGNYNPYTGKKGTKNPW*	.	hypothetical_protein	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0013	shell	direct	high	221	0.995	GCA_012978915.1_01555
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	57334	57588	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	10596	10850	GCA_012978915_1_9_56	GCA_012978915_1_9_56	-	78164	.	.	hypothetical protein	MAWLSGFLLLGFRLWPSGFVRPPATRSKFAPFDRAYFSLVAGGSKTHGEINLTLTLVHTIVLNFEVLCKSYHGFLVPFLPVYGL*	.	hypothetical_protein	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0014	shell	ambiguous	low	47	0.184	GCA_012978915.1_01555
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	57595	58050	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	10857	11312	GCA_012978915_1_9_57	GCA_012978915_1_9_57	+	78164	.	.	hypothetical protein	MYPYLKFLLNLSRCDTDFARLCQSPAYKMRLYRRLLCLFRRVEDTTAFVSTRFVKAFFKPALTFLPVTHAGLNSGKSMQAKISLCRSMFHAKTRPKTRLQKLQRLSKLKSVRKFWYKNSQISISKSQKAKRRTVKTASKTQMTAGVACKAS*	.	hypothetical_protein	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0015	.	unmatched_CDS	none	0	0	.
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	58236	58442	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	11498	11704	GCA_012978915_1_9_58	GCA_012978915_1_9_58	-	78164	.	PFAM:PF10078.8	transcriptional-regulator	MEIGEFEKLLKQAGLTKKEFANLTGMNYNSVVNWGTKNTYAQWVEPFLTAYIKAKKYDELIKSVKSAV*	phrogs_hmm	hypothetical_protein	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0016	shell	direct	high	206	0.995	GCA_012978915.1_01556
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	58578	58781	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	11840	12043	GCA_012978915_1_9_59	GCA_012978915_1_9_59	+	78164	.	.	hypothetical protein	MKELTKQIALSLEASGYMLRRGVISSKEHKRYYEFVKGSELVLLAFEDMKDGETLPTKLPSRRKVAL*	.	hypothetical_protein	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0017	shell	direct	high	203	0.995	GCA_012978915.1_01557
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	58825	59454	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	12087	12716	GCA_012978915_1_9_60	GCA_012978915_1_9_60	+	78164	.	.	hypothetical protein	MTLYKILNLSGTEFGGERPEYLYMKKREVQKGYDIYGARIYLIPLDKVSEVFAGKSIEQIDAKDIDTDTFEDFDFIKKISKEILVDGDFESDERFLVIEADGLAIHMEVANEDEYMRGFDETIALDDGNGYLHEPKTIGLIEDEIEVEFLDEPIDDATTYWLNENYFKESFGVTVADWELISVDGEKKILAWEEGTHETSKRYMQILDL*	.	hypothetical_protein	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0018	shell	direct	high	629	0.998	GCA_012978915.1_01558
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	59451	59741	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	12713	13003	GCA_012978915_1_9_61	GCA_012978915_1_9_61	+	78164	.	.	hypothetical protein	MIGALPLNLTKGRTMKIWNLTKVHYGPNGMMSREQDKGNYASNSIKVILNYINKKYKLKVKGWQTFDRTAYCYTDEDEARTVWNLDLVAEGKLIEP*	.	hypothetical_protein	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0019	shell	direct	moderate	248	0.852	GCA_012978915.1_01559
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	59815	60042	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	13077	13304	GCA_012978915_1_9_62	GCA_012978915_1_9_62	+	78164	.	PFAM:PF07927.11	toxin	MSKRDKLIQELENNPKNVRFEVLKNLLESDGWEALNNGSSHWQFRKGGERITVPYKRPVKPLYVKNVLKALKDEK*	phrogs_hmm	hypothetical_protein	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0020	shell	direct	high	227	0.996	GCA_012978915.1_01560
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	60039	60386	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	13301	13648	GCA_012978915_1_9_63	GCA_012978915_1_9_63	+	78164	.	PFAM:PF15919.4	toxin-antitoxin-system-HicB-like	MKKDLNYYLNLPYEIIVKKLTKEEGGGYFARYKDYPYVMGDGESEAEAIADVKEAFKFVIQTDLERGDFIREPETKTIRVNISLPKSLLEAIDKVASNRSAFLANAASRALAGQR*	phrogs_hmm	hypothetical_protein	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0021	shell	direct	high	347	0.997	GCA_012978915.1_01561
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	60458	60595	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	13720	13857	GCA_012978915_1_9_64	GCA_012978915_1_9_64	+	78164	.	.	hypothetical protein	MAKFANIDVVEHKKPSRLDKAIKEVKNGEVETFKNFNDFEKSLNA*	.	hypothetical_protein	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0022	shell	direct	high	137	0.993	GCA_012978915.1_01562
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	CDS	60802	62532	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	14064	15794	GCA_012978915_1_9_65	GCA_012978915_1_9_65	-	78164	.	PFAM:PF16510.4	Portal-protein	MLNIDQLKDILEEATQKNAASIAEYRLAKRYYGGKQLPSDVITILEERGQPPIHENILAMLIEKIQGYKDMSRQDTEVIGRQKADRDMALVLGDIIKAISDTLEFSRQKKRNDENLLLGLGVAEVWIKELDASDEWGKKEKAITVSTIPSDMFYIDPYSCEEDASDAKYFIKLMSMDFEDAKVYFGQKANALKLNIISRYRKRVNIYEFWIKEPDSQSQNGYTWNRYIMGDTLVLLRYEKSPFANGMHPFAVCKLKIDDENRWYGFFRNLKPQIDFINFAENRMANMIGSSKILYESDAVDDADTFAKEINIDNAVVRVKNGALADKKIEIVNNQPQISNLSAKVADARATAQRLSGLNDETLGLAVNRLSGSAIEQRNNAGIVSLQGFLSASAAMDKMIFLKAIDLITRYFDAEQVFRIVEKDNAERYFTINEKERDANGDVKIKDGKAVVKNKIKVGMYDISLNLVPHVKTKREDILKHWAEIIKTITPIDPNMIKRLIPLMLDDSDSPIARDVREMMIADDEQASKQASPAEQLQMQNMQLDLQLKQAKIQNLKADALKKIGEGKEEMGRARG*	hallmark_hmm	common_virus	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_CDS_0023	shell	direct	high	1730	0.999	GCA_012978915.1_01563
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	tRNA	52096	52170	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	5358	5432	tRNA-Gln	tRNA-Gln	+	78164	.	tRNAscan-SE score: 52.9	Gln	NA	tRNAscan-SE	.	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote	cenote	tRNA	52192	52266	GCA_012978915.1	LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915.1_LIWW01000009.1	GCA_012978915.1|LIWW01000009.1	GCA_012978915_1_9	GCA_012978915_1_9@C5	5454	5528	tRNA-Met	tRNA-Met	+	78164	.	tRNAscan-SE score: 74.7	Met	NA	tRNAscan-SE	.	C5	15794	46739	62533	GCA_012978915.1|LIWW01000009.1@region_46740_62533@tool_cenote_tRNA_0002	.	.	.	.	.	.