core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	12992	14722	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	1	1731	GCA_012978955_1_9_8	GCA_012978955_1_9_8	+	80571	.	PFAM:PF16510.4	Portal-protein	MLNIDQLKDILEEATQKNAASIAEYRLAKRYYGGKQLPSDVITILEERGQPPIHENILAMLIEKIQGYKDMSRQDTEVIGRQKADRDMALVLGDIIKAISDTLEFSRQKKRNDENLLLGLGVAEVWIKELDASDEWGKKEKAITVSTIPSDMFYIDPYSCEEDASDAKYFIKLMSMDFEDAKVYFGQKANALKLNIISRYRKRVNIYEFWIKEPDSQSQNGYTWNRYIMGDTLVLLRYEKSPFANGMHPFAVCKLKIDDENRWYGFFRNLKPQIDFINFAENRMANMIGSSKILYESDAVDDADTFAKEINIDNAVVRVKNGALADKKIEIVNNQPQISNLSAKVADARATAQRLSGLNDETLGLAVNRLSGSAIEQRNNAGIVSLQGFLSASAAMDKMIFLKAIDLITRYFDAEQVFRIVEKDNAERYFTINEKERDANGDVKIKDGKAVVKNKIKVGMYDISLNLVPHVKTKREDILKHWAEIIKTITPIDPNMIKRLIPLMLDDSDSPIARDVREMMIADDEQASKQASPAEQLQMQNMQLDLQLKQAKIQNLKADALKKIGEGKEEMGRARG*	hallmark_hmm	common_virus	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0001	shell	direct	high	1730	0.999	GCA_012978955.1_01621
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	14929	15066	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	1938	2075	GCA_012978955_1_9_9	GCA_012978955_1_9_9	-	80571	.	.	hypothetical protein	MAKFANIDVVEHKKPSRLDKAIKEVKNGEVETFKNFNDFEKSLNA*	.	hypothetical_protein	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0002	shell	direct	high	137	0.993	GCA_012978955.1_01622
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	15138	15485	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	2147	2494	GCA_012978955_1_9_10	GCA_012978955_1_9_10	-	80571	.	PFAM:PF15919.4	toxin-antitoxin-system-HicB-like	MKKDLNYYLNLPYEIIVKKLTKEEGGGYFARYKDYPYVMGDGESEAEAIADVKEAFKFVIQTDLERGDFIREPETKTIRVNISLPKSLLEAIDKVASNRSAFLANAASRALAGQR*	phrogs_hmm	hypothetical_protein	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0003	shell	direct	high	347	0.997	GCA_012978955.1_01623
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	15482	15709	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	2491	2718	GCA_012978955_1_9_11	GCA_012978955_1_9_11	-	80571	.	PFAM:PF07927.11	toxin	MSKRDKLIQELENNPKNVRFEVLKNLLESDGWEALNNGSSHWQFRKGGERITVPYKRPVKPLYVKNVLKALKDEK*	phrogs_hmm	hypothetical_protein	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0004	shell	direct	high	227	0.996	GCA_012978955.1_01624
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	15783	16073	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	2792	3082	GCA_012978955_1_9_12	GCA_012978955_1_9_12	-	80571	.	.	hypothetical protein	MIGALPLNLTKGRTMKIWNLTKVHYGPNGMMSREQDKGNYASNSIKVILNYINKKYKLKVKGWQTFDRTAYCYTDEDEARTVWNLDLVAEGKLIEP*	.	hypothetical_protein	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0005	shell	direct	moderate	249	0.856	GCA_012978955.1_01625
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	16070	16699	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	3079	3708	GCA_012978955_1_9_13	GCA_012978955_1_9_13	-	80571	.	.	hypothetical protein	MTLYKILNLSGTEFGGERPEYLYMKKREVQKGYDIYGARIYLIPLDKVSEVFAGKSIEQIDAKDIDTDTFEDFDFIKKISKEILVDGDFESDERFLVIEADGLAIHMEVANEDEYMRGFDETIALDDGNGYLHEPKTIGLIEDEIEVEFLDEPIDDATTYWLNENYFKESFGVTVADWELISVDGEKKILAWEEGTHETSKRYMQILDL*	.	hypothetical_protein	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0006	shell	direct	high	629	0.998	GCA_012978955.1_01626
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	16743	16946	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	3752	3955	GCA_012978955_1_9_14	GCA_012978955_1_9_14	-	80571	.	.	hypothetical protein	MKELTKQIALSLEASGYMLRRGVISSKEHKRYYEFVKGSELVLLAFEDMKDGETLPTKLPSRRKVAL*	.	hypothetical_protein	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0007	shell	direct	high	203	0.995	GCA_012978955.1_01627
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	17082	17288	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	4091	4297	GCA_012978955_1_9_15	GCA_012978955_1_9_15	+	80571	.	PFAM:PF10078.8	transcriptional-regulator	MEIGEFEKLLKQAGLTKKEFANLTGMNYNSVVNWGTKNTYAQWVEPFLTAYIKAKKYDELIKSVKSAV*	phrogs_hmm	hypothetical_protein	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0008	shell	direct	high	206	0.995	GCA_012978955.1_01628
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	17474	17929	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	4483	4938	GCA_012978955_1_9_16	GCA_012978955_1_9_16	-	80571	.	.	hypothetical protein	MYPYLKFLLNLSRCDTDFARLCQSPAYKMRLYRRLLCLFRRVEDTTAFVSTRFVKAFFKPALTFLPVTHAGLNSGKSMQAKISLCRSMFHAKTRPKTRLQKLQRLSKLKSVRKFWYKNSQISISKSQKAKRRTVKTASKTQMTAGVACKAS*	.	hypothetical_protein	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0009	.	unmatched_CDS	none	0	0	.
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	17936	18190	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	4945	5199	GCA_012978955_1_9_17	GCA_012978955_1_9_17	+	80571	.	.	hypothetical protein	MAWLSGFLLLGFRLWPSGFVRPPATRSKFAPFDRAYFSLVAGGSKTHGEINLTLTLVHTIVLNFEVLCKSYHGFLVPFLPVYGL*	.	hypothetical_protein	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0010	shell	ambiguous	low	45	0.176	GCA_012978955.1_01629
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	18145	18366	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	5154	5375	GCA_012978955_1_9_18	GCA_012978955_1_9_18	-	80571	.	.	hypothetical protein	MKKLFIFVFIIVLLAPTFALAYGSHSVGGHIRKNGSCVAPHYRTNRDKTKLNNYSTKGNYNPYTGKKGTKNPW*	.	hypothetical_protein	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0011	shell	direct	high	221	0.995	GCA_012978955.1_01629
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	18419	18865	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	5428	5874	GCA_012978955_1_9_19	GCA_012978955_1_9_19	-	80571	.	.	hypothetical protein	MSFRNKLIKKIDLEYDEVFSNDWEISNQGYEDYQRIREKILEKINWVNKEKKVIYHVFLAFFVYFVLFLIIFCGFLELSSTGFVLSFLFAWQKGINRDIDRSSASDQYTAVLLRWLERVDSDFIEKLHAEHVKIKEEVTHFKKSTKTD*	.	hypothetical_protein	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0012	shell	direct	high	446	0.998	GCA_012978955.1_01630
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	18874	19260	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	5883	6269	GCA_012978955_1_9_20	GCA_012978955_1_9_20	-	80571	.	PFAM:PF10078.8	transcriptional-repressor	MKYSEAILAALRREVNAKNNKELSEILGIGYRNFNNWQTRGRIPTGRLYEIAQKLGVDLDILINGNINGGNNIIFRGDGNTIRGAEKIDDEILAEFCELYKQYRTPMVEGELITLIDRLKKIKKAQEE*	phrogs_hmm	hypothetical_protein	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0013	shell	direct	high	386	0.997	GCA_012978955.1_01631
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	19386	19592	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	6395	6601	GCA_012978955_1_9_21	GCA_012978955_1_9_21	+	80571	.	.	hypothetical protein	MRGLMITLDDKRMLMEFGNITNFAKENDLNKDAVYALLKRHGKPTLFQPNSLIKQTYDKLRQMGYVIE*	.	hypothetical_protein	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0014	shell	direct	high	206	0.995	GCA_012978955.1_01632
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	19870	20163	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	6879	7172	GCA_012978955_1_9_22	GCA_012978955_1_9_22	+	80571	.	.	hypothetical protein	MARLLAVPWRIVSDEARILFLHIAKIADDDEDDVCHASDEELASAMGVDSIKKPFEELKKARYMIVDETSEGRSLRLRYDVTLDFLEAAGYHEAVKG*	.	hypothetical_protein	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0015	shell	direct	high	293	0.997	GCA_012978955.1_01633
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	20167	21081	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	7176	8090	GCA_012978955_1_9_23	GCA_012978955_1_9_23	+	80571	.	PFAM:PF06970.10	replication-initiation-O-like	MAKSISKPERLEFDMTLSGRAKFFYSMLVKLSKNDDECCTASNQYLADKCGCSTKTIMRILSELEDGEYIGILYKNINNKSGRKIFTKIDLFLKYQKDIEVENPSDIFDVRMSHEMSDDYPITCNHVNLKENIKRKVEKNSKFDEQILDELKDIKKENPAHFKSKQKSVNQVNIFNVVLPKSVNPQMWADFVAMRKESKHPLTQTAAKAIVNKLSTFEAQGLDCNEILNTSICNSYRGIFAPVKQKVSNVGRGAEEISNYIRSKVMHENFDPVKAMREGIDELVDGRKVAFGSVGGRMRFYFVN*	phrogs_hmm	hypothetical_protein	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0016	shell	direct	high	914	0.999	GCA_012978955.1_01634
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	21286	21693	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	8295	8702	GCA_012978955_1_9_24	GCA_012978955_1_9_24	+	80571	.	.	hypothetical protein	MNLAMDVTNKGDFNTFEMGLLSELISAVPNHRQSELAKMLFCDTDGLNRLRNGVITMPMVTHYVKKTLKREAKDRATIVYEDFRNGADIKLFSDKEMKEYDTLGIGDGFRQKIAERIYHNLASGVLECLDGATNK*	.	hypothetical_protein	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0017	shell	direct	high	407	0.998	GCA_012978955.1_01635
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	21710	21838	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	8719	8847	GCA_012978955_1_9_25	GCA_012978955_1_9_25	+	80571	.	.	hypothetical protein	MQLNEIGEKLNKLLFEVMKNSSMLVTLADAARILDLSYSGGL*	.	hypothetical_protein	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0018	shell	direct	high	128	0.992	GCA_012978955.1_01636
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	21899	22204	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	8908	9213	GCA_012978955_1_9_26	GCA_012978955_1_9_26	+	80571	.	PF12167.8	Arm DNA-binding domain	MVCELRSDKQTKIQALVKSQSSNKQVVSDNKGDEMTNHAYIRGNMVWVDATFEGKRYRVSTNKKADKFNLAWANKHYIEIITRHIVSKKESEKRTRQETAN*	hhsuite_tools	hypothetical_protein	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0019	shell	direct	high	305	0.997	GCA_012978955.1_01637
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	22246	22941	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	9255	9950	GCA_012978955_1_9_27	GCA_012978955_1_9_27	+	80571	.	PDB:1Z19_B	Integrase	MRFLTHKTYVRDFQHWILPDFGDTALKDIRPLALDTWQNKLRQRVSNKRIYNIRSVFSMILKDAVMDELIKRNPFDSVPKLRNEKVEIKPLSLSEVQRVISVADPHFANVLKLAFFTGMRTGEMIALRWDKIDFEKETIRIDQAIRCGMLNPPKTQTSIRIIKMLRHVKEALLNLKQDNDSEWVLPTQNGTMLYEPKTLNRRWKEALKRAGLEYSVFYQTRHTFASLDDSC*	common_virus_hmm	common_virus	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0020	shell	direct	high	695	0.999	GCA_012978955.1_01638
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	23502	25583	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	10511	12592	GCA_012978955_1_9_28	GCA_012978955_1_9_28	-	80571	.	PDB:4KFU_C	Genome-packaging-NTPase	MVYFGIATAAPTADFVGTFGRTIGLANLKFFGYAAYVYPFALIIFAYYVYRDFKDFDLEFSQVLLGILLFFLAFLMFQAMTMSPANSGIVGKFINDALKDVIGMIGTCVVILMIFTISLGLIFRENLIVVLKRAFVIPISAQNSTKIQPIQPRQRQIAKIERQKDKNSVADEETIDAQILACDDENLEQNGGQEAKISMVNGVEILNEVAENKKLLDEIEKGKVEKPKDFVLPPLKFLNDPPKRSHSVNEAEIDQKISDLLDKLRKFKIDGDVVRTYTGPIVTTFEFRPAPHIKVSKILTLQDDLAMALRAQTIRIQAPIPGKDVVGIEVPNQNLETIYLKEILESEIYKNASSPLTMALGKDIVGAPFITDLKKLPHLLIAGTTGSGKSVGINAMLLSLLYRNSPQTLRLMMIDPKMLEFSIYNDIPHLLTPVITQAKQAIIALSNMVAEMERRYTIMSHTRTKNIESYNEKMKAEGGEQFPYIVVIIDELADLMMTSGKDVELYIGRLAQMARASGIHLIVATQRPSVDVVTGLIKANLPSRISYRVGQRIDSKVILDQMGAESLLGRGDMLFTPPGSPGIIRLHAPFASEKEIENIVNFLKDQQEVIYDERFLAEDGSNASATGAAINAGELDELYEEAKEIVLSEQKTSISYLQRRLKIGYNKAANIIEQMEKMGVLSPVNAKGQREIL*	hallmark_hmm	common_virus	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0021	persistent	direct	high	2081	1.0	GCA_012978955.1_01641
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	25712	27934	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	12721	14943	GCA_012978955_1_9_29	GCA_012978955_1_9_29	-	80571	.	PRK14692	flagellar hook-associated protein FlgL. 	MRITNQLRFSQTLHDYQNSMAGVNKSYRQMSSGLKIQNPYENASVYNDAMRLDYEAETLSQVVEATSKSVNFSKNTDKSLQEFEKQLENFKTKVVQAASDVHSKTSLEALANELQGIKNHLVNIANTSINGQFLFSGSAVDTKPIDGNGKYQGNRDYMKTSAGAQIELPYNIPGHDLFLGKDNDYSKILTTNVSLTDNTKTDVSENPKYLTAQSKIKNMIGLNYANDSKNVDNQGKYAGSINPDYDFLDSSNINFPDTYFYMQGKKPDGTSFTSKFKMTAGASVESLMEKIGQEFGNTATTKVVDVSINNDGQFNIKDLTKGNQVIDFHMVAATSTATNKNAIAPNNALDGVNTLADLETMASTNPKTVHITEFTKSKFKDKDGNTVNSFDFDRVRFDKKDNKIIGTISQVVRKSGEYATDSTRLSEVAGIDKLYPKEQGKYNIDDRKLTMEIVSRNGTKYKVDIDLGHEEAPAQTAKFTISGTTSAGTPIAAQTFDIWHATEYGQFKTPTKDVTFRQINDIISMAASDNIPTANTYDNYNSAISLSKGAVEVNMNEKGKIELTDKTNAVSTIQVAAYDSTTNSDKFYGDSTGTTAATSQGRGSVFSFSENNAITIDEPSVNIFDDLDKMIEAVRQGYYRSNAENGDPRNTGMQGALERLDHLIDHANKELTKVGSQTKLITSTNERASLMKVNVLTVKNEVIDADYAEAYLNFTQKTLSYQAMLQASAKINQLSLLNYL*	mmseqs_cdd	nonviral_gene	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0022	persistent	direct	high	2222	1.0	GCA_012978955.1_01642
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	CDS	28103	28786	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	15112	15795	GCA_012978955_1_9_30	GCA_012978955_1_9_30	+	80571	.	COG1583	CRISPR/Cas system endoribonuclease Cas6, RAMP superfamily [Defense mechanisms]. 	MLTINAKLPTRNLRVSKALPQLIQGFIYRYLPAEEHAGYRHEKTGKIFKRMNFDFYLSGADLRVRFTSYEPKFEKAVALGVLKDGLNLGELCFVDTTVAVSEHRTSSDDVVLQGCVACAVQGLLGHKIYLQAQDSRHLEMMKANALQRFETLTEREYGGKFELNLKWQNLQKPFYFYYGNNQTPVIAWQAKWRVQAEPELINLILDAGVGSGCMNYGVGFLEVVIEG*	mmseqs_cdd	nonviral_gene	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_CDS_0023	persistent	direct	high	683	0.999	GCA_012978955.1_01643
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	tRNA	23354	23428	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	10363	10437	tRNA-Gln	tRNA-Gln	-	80571	.	tRNAscan-SE score: 52.9	Gln	NA	tRNAscan-SE	.	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote	cenote	tRNA	23261	23332	GCA_012978955.1	LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955.1_LIWY01000009.1	GCA_012978955.1|LIWY01000009.1	GCA_012978955_1_9	GCA_012978955_1_9@C1	10270	10341	tRNA-Met	tRNA-Met	-	80571	.	tRNAscan-SE score: 74.6	Met	NA	tRNAscan-SE	.	C1	15795	12992	28787	GCA_012978955.1|LIWY01000009.1@region_12993_28787@tool_cenote_tRNA_0001	.	.	.	.	.	.