core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	515335	515511	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	1	177	GCA_013267515_1_1_508	GCA_013267515_1_1_508	+	1933377	.	PRK07597	preprotein translocase subunit SecE; Reviewed	MKFIRDTFQVLKDTTWPTRKQSWVDFISVMEYTAFFVVIIYLFDLFVTRGLVRLLNIF*	mmseqs_cdd	nonviral_gene	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0001	persistent	direct	high	176	0.994	GCA_013267515.1_00547
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	515657	516193	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	323	859	GCA_013267515_1_1_509	GCA_013267515_1_1_509	+	1933377	.	COG0250	Transcription antitermination factor NusG [Transcription]. 	MDSFDKGWFVLQTYSGYENKVKENLLQRAQTYNMLENILRVEIPTQTVQVEKNGKTKEVEENRFPGYVLVEMVMTDEAWFVVRNTPNVTGFVGSHGNRSKPTPLLEEEIRQILISMGQTVQEFDIHVKVGDTVRIIDGAFADYTGKITEIDNSKVKMIISMFGNDTVAEVNLSQIAEL*	mmseqs_cdd	nonviral_gene	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0002	persistent	direct	high	536	0.998	GCA_013267515.1_00548
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	516401	517198	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	1067	1864	GCA_013267515_1_1_510	GCA_013267515_1_1_510	+	1933377	.	.	hypothetical protein	MKTIFENQEVKLNRKNGSTVIVRNDGFSYLDAKSEKKNLNISFDKVSTILSLRYCNSNSSYNLIFRDQNGKNMAEFDTDTTIYNNDHNILETKAILLAFAARKLTKDFPNNLRDLDIILAFSMKEKEIRIASGIIYGSKHKISIEDIRRVQCVTNGTISNLALYKSDKKTFWDIPDMKVPCNEITLPLFEAIVTKNTGKGIDFSRGNGFDQKTSEFMIIRYMDANFFVNSDGTLDKGWQKQIYDRMSAYKYDLATLLEGYCRLRV*	.	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0003	persistent	direct	high	797	0.999	GCA_013267515.1_00549
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	517532	518602	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	2198	3268	GCA_013267515_1_1_511	GCA_013267515_1_1_511	-	1933377	.	PDB:1Z19_B	Integrase	MASIRKRGKYFEYRVVYHDSLGERHEASCGGFKTKAQARAAGQKREVELRNSPMSNNEVTMLDYYKAWAQLYKKPYIKKKTWNSYKQTENHIIKYFGQIKLKDMTPVRYQEFLNKFGSKYAQDTIERTHYHIKSAVKIAVRDQLIPSNFTEGAVVKSQKEKKPEAESYLEEDEYFYVISKTQENPQYISHMTLYILAISGMRFAEAMGLTWDDIDFKNQVFRVENTWDYSDTEDFSETKNEQSIREIPFNDNVAKVLKNYKENYWRENKQGRVLFGASNRATNTALKRMVKREVHPHTLRHTYASYLIFKEVPVASISKLLGHKSILITLKVYAHQFEKMKEKHHSEVRNILSEIH*	common_virus_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0004	shell	direct	high	1070	0.999	GCA_013267515.1_00550
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	518720	519091	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	3386	3757	GCA_013267515_1_1_512	GCA_013267515_1_1_512	-	1933377	.	PFAM:PF09151.9	zinc-finger-domain-protein	MGLKGLLKAKTIGEYLQAKKNPELMKQIEDRSLGTVLKQSAQVSNQNSIVKNQKRLEKNAIKCPHCKSKNVQFMQQGKKAFSVRKAVGGAVLTGGIGTLAGFAGKKGKKQWHCQECGNVFETK*	phrogs_hmm	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0005	cloud	direct	high	371	0.997	GCA_013267515.1_00551
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	519278	520018	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	3944	4684	GCA_013267515_1_1_513	GCA_013267515_1_1_513	-	1933377	.	PDB:2FJR_A	Repressor-protein-CI	MELNIYIGQKIKEFRTKEKMTQSDLAKVLDTTKQTISRYEKGDRKAGQDTLFTLCDIFNVSIDDFFPPIQSPDASNELVQAINDTVIQLTPPNQKIVLRTSEDLLEGQKTRGEKITEISEPLTEYHVFEKLAAGNGYNYMEDRNYDVVFFNKDIDHDFASWVYGDSMEPKFLDGSVALIKDTGFDYDGAIYAVDWDGQSYIKKVYKEKDGLRLVSINDKYDDKFAKWEEEPRIIGKVVGNFMPVER*	common_virus_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0006	cloud	direct	high	740	0.999	GCA_013267515.1_00552
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	520187	520300	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	4853	4966	GCA_013267515_1_1_514	GCA_013267515_1_1_514	+	1933377	.	.	hypothetical protein	MLRRRRKQKDPWLTQPRATVIAAIIALIAVILQLLFK*	.	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0007	.	unmatched_CDS	none	0	0	.
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	520481	520615	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	5147	5281	GCA_013267515_1_1_515	GCA_013267515_1_1_515	+	1933377	.	.	hypothetical protein	MLIKIVSLLLSVTAIVMSLFHIHELYHEYKRLSKRVKYWNKRHR*	.	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0008	cloud	direct	high	134	0.993	GCA_013267515.1_00553
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	520619	520948	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	5285	5614	GCA_013267515_1_1_516	GCA_013267515_1_1_516	-	1933377	.	.	hypothetical protein	MDNKIMDNIIINKLSTLTLNHQIKWNTIDHLTVRGTPYSQQFQHILPDKSFFTKYEGKTFVVLYGEIRDFFRNRTIENYFLQEIQGETIEDVNVPEEDIIKLHTIISLI*	.	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0009	cloud	direct	high	329	0.997	GCA_013267515.1_00554
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	520948	521373	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	5614	6039	GCA_013267515_1_1_517	GCA_013267515_1_1_517	-	1933377	.	.	hypothetical protein	MNWIQWLEFINNITAPFGFLLTIFTFLLARATRKKLEKTEEITLFNAERAQYLSKLDGIKTVIDESENRKDIIPEKIITNTLKLISELENNYPCLFKHDKITAVALKDIKALKDKTKIPLVEFLDPFNRLYSMFTNRKEIK*	.	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0010	cloud	direct	high	425	0.998	GCA_013267515.1_00555
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	521430	521648	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	6096	6314	GCA_013267515_1_1_518	GCA_013267515_1_1_518	+	1933377	.	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain  [Transcription]. 	MQIKLYELRKKAGLNQADLAKKIGISVNQYGKKERGQQEFTQDEMFLLSNFFNKSISDIFLPRESPKREHQI*	mmseqs_cdd	nonviral_gene	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0011	cloud	direct	high	218	0.995	GCA_013267515.1_00556
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	521795	521992	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	6461	6658	GCA_013267515_1_1_519	GCA_013267515_1_1_519	+	1933377	.	.	hypothetical protein	MSNVAVNVVRIEPDAYDAAVKFANENDLKISKVISMFVRYGVENVELKEVDVRTEKFCIGDQVIN*	.	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0012	cloud	direct	high	197	0.995	GCA_013267515.1_00557
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	522001	522363	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	6667	7029	GCA_013267515_1_1_520	GCA_013267515_1_1_520	+	1933377	.	.	hypothetical protein	MAVSRDMTELEIKVLNGIKNGASFDLPIQASELRISLGLSKRMLEEVIESLRVNFRQPIIAKRTQPSGYYLPRNEEERQAGLAPYKRQIATEQKNLAAVMAVNLDEFWQRKKPDGNQAQK*	.	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0013	shell	direct	high	362	0.997	GCA_013267515.1_00558
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	522385	522669	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	7051	7335	GCA_013267515_1_1_521	GCA_013267515_1_1_521	+	1933377	.	PFAM:PF09035.9	Excisionase	MNDLMNQMLDQFEAGLMDRALKVMHVVTDEKRHYPMELNKSQCSEMLLGTKDTGTFDARFNCHKDFPRIEGKRDKFPRDEVIEWYHRNWMKTGG*	common_virus_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0014	shell	direct	high	284	0.996	GCA_013267515.1_00559
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	522673	523119	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	7339	7785	GCA_013267515_1_1_522	GCA_013267515_1_1_522	+	1933377	.	.	hypothetical protein	MPNWAKGTLKLRGRRENIASALKDMLLNANVSFEGGCDDDLLVFNSTAHYFYINNTRRAFIETDQVEVWLEEDFCIVELDKFKQAWAVIPENFKEISKKHDVDIKIFTFEMGMEFTQEIEICKGKIIKNNCNEFDNYQWDVPFSNLGG*	.	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0015	cloud	direct	high	446	0.998	GCA_013267515.1_00560
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	523122	523346	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	7788	8012	GCA_013267515_1_1_523	GCA_013267515_1_1_523	+	1933377	.	.	hypothetical protein	MQNQEQIRLIMNWERNHYRLGTNYKNKLAKRSVEAVKLELADLTREWDSVTFSVEPKGAMKIEGDRMTIFRKRG*	.	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0016	shell	direct	high	224	0.996	GCA_013267515.1_00561
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	523348	524061	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	8014	8727	GCA_013267515_1_1_524	GCA_013267515_1_1_524	+	1933377	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MNKKEALKRLEEIKTPTIFGNFVGYYGARDLIDEIYKTPLYLRNILARLRELPEHDREVWLKGIMDEFELDFSHAKWREGYEQGKFDGVVEAEKSKPVIPQFVADWIDYCKENHFTITGAFDPVSEYGIGIAGTFKGSVYKCTRWALDNQNLFARAWLDGYEVEQERRYKAVLPNLYEEENVLHFSQEDEVWYFNNDFNDNVSVDKDSRYHTRKELEDAGFGWVFDCEGVEVQEVEK*	mmseqs_cdd	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0017	cloud	direct	high	713	0.999	GCA_013267515.1_00562
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	524058	524228	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	8724	8894	GCA_013267515_1_1_525	GCA_013267515_1_1_525	+	1933377	.	.	hypothetical protein	MKVAKYTHKAFDGVNVIRGWVLVNDYGDKEFVYYNGVGLCVHSVSDWEGELREVEE*	.	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0018	cloud	direct	high	170	0.994	GCA_013267515.1_00563
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	524225	524434	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	8891	9100	GCA_013267515_1_1_526	GCA_013267515_1_1_526	+	1933377	.	.	hypothetical protein	MKFKRCQCGSETFYMRQNVTGTIDYPVNIDGEPDGYVSYDNVNYYDARKYYRCIECDKRAKEVQDDTKI*	.	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0019	cloud	direct	high	209	0.995	GCA_013267515.1_00564
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	524418	524837	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	9084	9503	GCA_013267515_1_1_527	GCA_013267515_1_1_527	+	1933377	.	TIGR01671	phage uncharacterized protein TIGR01671. This model represents an uncharacterized, well-conserved family of proteins found in bacteriophage and prophage regions of Gram-positive bacteria. [Mobile and extrachromosomal element functions, Prophage functions, Hypothetical proteins, Conserved]	MIPKFRGRSTVEDDKGKWVYGHLLIDDNRALIINGIIEANDEYVSLENWCDIDMKTIGQSTGLKDKNGTEIFEGDALKNNDYPNQTFICKHSRLQASFQAESLNGLLTLSLWKDEERDWQVLGNIYEKFEPLEAINDPE*	mmseqs_cdd	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0020	cloud	direct	high	419	0.998	GCA_013267515.1_00565
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	524824	525132	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	9490	9798	GCA_013267515_1_1_528	GCA_013267515_1_1_528	+	1933377	.	.	hypothetical protein	MTLNERIKNLEALHIVQKRGLANTQLWLVFVSFIMFLLVVGMIAAYGKQQTQIKDLQAELERVTNEQKDVNQRQDVMINKFNQMYYEYQHKKITGKDNFPGG*	.	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0021	shell	direct	high	308	0.997	GCA_013267515.1_00566
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	525135	525401	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	9801	10067	GCA_013267515_1_1_529	GCA_013267515_1_1_529	+	1933377	.	.	hypothetical protein	MSEIIDRKPFRINFKNKDQTIFAVIEGVLCIFFRNDWGWLNVPDEVYNKYWSYIKNKGITYISDEELQRLSQKFTNGVELINIRESEK*	.	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0022	cloud	direct	high	266	0.996	GCA_013267515.1_00567
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	525401	525634	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	10067	10300	GCA_013267515_1_1_530	GCA_013267515_1_1_530	+	1933377	.	.	hypothetical protein	MSEILGAVLTLVLVFFLGAFINHLDWRKEQKKLERQAKEDERIELEAMYVVCAIENDRRERMRKLAEARKKKTGWNY*	.	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0023	shell	direct	high	233	0.996	GCA_013267515.1_00568
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	525649	526017	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	10315	10683	GCA_013267515_1_1_531	GCA_013267515_1_1_531	+	1933377	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MINNVVLVGRMTRDAELRYTPQNQAVATFTLAVNRNFKNQSGEREADFINVVIWRQQAENLANWAKKGTLIGITGRIQTRTYENQQGQHVYVMEVVADNFQILQNRNKAANADSLYGEEPTY*	common_virus_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0024	persistent	direct	high	368	0.997	GCA_013267515.1_00569
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	526035	526283	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	10701	10949	GCA_013267515_1_1_532	GCA_013267515_1_1_532	+	1933377	.	.	hypothetical protein	MRENGKTYNRFITGLKAMIEHLEFLEDEVRRCYHDMEEYEAKIDLLETQKMDLVETLANKTWQDMRQTAFKRRQARKWRAKA*	.	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0025	cloud	direct	high	248	0.996	GCA_013267515.1_00570
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	526280	527029	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	10946	11695	GCA_013267515_1_1_533	GCA_013267515_1_1_533	+	1933377	.	PDB:1G60_B	Adenine-specific-DNA-methyltransferase	MKCELFHDNFQNYKRYGIPKAQLVIADIPYNLGENAYASSPEWYVDGDNKNGESDKAKSTFFNTDVNFNIAEFMHFCSKMLIKEPKEKGKAPCMIVFCAHQQQQMVIDLAKRYGFQKYIPIVFIKKSSPQVLKANMKIVGAVEYALVLYRDKLPKFNNDGQMVLNHFPWIVDQSYPKIHKTQKPVPVLKRLIEIYTDKGDVVIDPCAGSGATLRAALELERQAYGFEIDRFFYKDAKEKMLTSFQASLF*	common_virus_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0026	cloud	direct	high	749	0.999	GCA_013267515.1_00571
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	527102	528031	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	11768	12697	GCA_013267515_1_1_534	GCA_013267515_1_1_534	+	1933377	.	PFAM:PF09681.9	replisome-organiser	MSEIKWIKITTDIFDDEKIRLIDALPEHDAILVIWFKILTLAGRQGGNGLLMMNNKVHYTDEMLAAIFNRPITTIRLALQTFEQFGMIEIINGIISLPNWEKHQNVDGMEKAKEQTRKRVARYREKQKQLLENGNVTCNVTVTPCNATDIDIEIDRDREKDKDNIVVIDKQNFIQEIEANLGRGLVKFEFDMINDYLLNQKVSTELFLEAVKIAVANNVRKFNYIARILDNWINQGIRTPEQAYQAQRDFQAKKNNKVIVKNQKAGNNPDWSNPDYKNETSPEKQAELEKQKQELLKRLEKKDGNSKKV*	rep_hall_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0027	cloud	direct	high	929	0.999	GCA_013267515.1_00572
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	528009	528200	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	12675	12866	GCA_013267515_1_1_535	GCA_013267515_1_1_535	+	1933377	.	.	hypothetical protein	MAIAKKCDRCGKFHEIYNKNDDSSNINSLVTANADEYNKRYNQKLINLCPDCKDSFFNWLKKR*	.	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0028	cloud	direct	high	191	0.995	GCA_013267515.1_00573
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	528205	528642	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	12871	13308	GCA_013267515_1_1_536	GCA_013267515_1_1_536	+	1933377	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MPFFPEINEVKTKENARKILRGYPRWRRVANDKNGQRVTTIYSFTPRNPNFTNNSQVEKLAIRKVDAEIELDAIEQAVSNLHNPFYRRILFEKYLKSTPEKDFSVYQNLAISESSYYDLLDKALIAFAEIYRNGEQVAISGENPE*	mmseqs_cdd	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0029	cloud	direct	high	437	0.998	GCA_013267515.1_00574
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	528750	529316	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	13416	13982	GCA_013267515_1_1_537	GCA_013267515_1_1_537	+	1933377	.	CDD:cd01192	site-specific-tyrosine-recombinase	MRRVEPIRDVDDIQRLKDYLKDRNERDYMLIVTGLYSGMRISDIIPLQVKQVTGEHIEIKERKTGKTKRFAINPELRRTLNNYIKNNDLKGYDFLFQSRKRKRADGVRITHIGRVAAYQIIKSAAESIGLQNIGTHSLRKTFGYHHYKKNQNVAILMEIFNHSSPDITLRYIGYKQDELDSSMIDFSY*	common_virus_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0030	cloud	direct	high	566	0.998	GCA_013267515.1_00575
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	529494	529829	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	14160	14495	GCA_013267515_1_1_538	GCA_013267515_1_1_538	+	1933377	.	pfam01844	HNH endonuclease. His-Asn-His (HNH) proteins are a very common family of small nucleic acid-binding proteins that are generally associated with endonuclease activity.	MEMRADRSGPHRVAFEKNKKIILKTRNICGICGQPVDKSLRYPHPLSPVIDHIIPVNKNGHPSDIANLQLAHWQCNRQKSDKLYAEERAVGSVVIGNRNLPQSINWTSYRS*	mmseqs_cdd	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0031	cloud	direct	high	335	0.997	GCA_013267515.1_00576
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	529933	531204	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	14599	15870	GCA_013267515_1_1_539	GCA_013267515_1_1_539	+	1933377	.	PDB:2JES_G	Portal-Protein	MSLKGMSYLRKKLLNYKLRVDMRYKQYAMKYNDISVGITIPAEVRMKYRSVLGWAAKGVDSLADRLVFREFANDDFEANEIFNQNNPDVFFDSAVLSALIGSCCFVYISQGATEIPRLQVIEASNATGVLDPITGLLTEGYAVLQRDDYDNPLLEAYFTEDMTWYYPKNEKPYSIHNPAGVPLLVPVIHRPDAVRPFGRSRITRAGMYYQRYAKRTLERADVTAEFYSYPQKYILGMDPSADAMDKWKATVSSLLRIDKDEEGDKPTVGQFTTSSMTPFTEQLKTAAAGFAGEMGLTMDDLGFVSDNPSSVEAIKASHENLRLAGRKAQRSLGSGLLNVAYVAVCLRDEFHYLRSQFVNTNIKWEPLFEADASTLTMIGDGAIKLNQAIPGFLDGEAIRDLTGVKGSGNVVPALPSEKEAVDG*	hallmark_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0032	cloud	direct	moderate	1208	0.95	GCA_013267515.1_00577
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	531197	532591	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	15863	17257	GCA_013267515_1_1_540	GCA_013267515_1_1_540	+	1933377	.	PFAM:PF06152.10	minor-head-protein	MDKDIFPELIKSIQDDFERAYGKSEVVRKSFEALKSKKATYTTVNDFAIEIGQILSKALGASLSADKLPDGKLYYNIAKRLLEDTLGRNYGLVSSYASDVQKQLNERANIHLKTQIPALNQDRIDGIVNRVSSEQDFDDIKWILQEPIVNFTQSIVDDSIEKNAEFHHKAGLQPEIVRKSVAKCCDWCQEVQGIYKYPRVPKDIYRRHQRCRCIVDYDPKNGKVQDVWSKIWRKQKDSDKIKERKGLNKEENISVVRKSALQHGIKVNPIKRSKVKKTEEAIIKAVGGGDQTKGSCSSLALAYIGNKAGFDVLDYRDGKSRTFFASMLNIKNISELPNVHSHVVADTNDFTAVKKLIGQMQDDKEYYLATGKHAAIVRKKEGWFQYLELQAPFEGNGFKPITNAVLKERFGCQRSHSVYGQKLQVPNVLIDSDSLGENEEFQKILGFINTKKGQQNKGDKGYVK*	phrogs_hmm	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0033	cloud	direct	high	1394	0.999	GCA_013267515.1_00578
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	532581	532880	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	17247	17546	GCA_013267515_1_1_541	GCA_013267515_1_1_541	+	1933377	.	.	hypothetical protein	MSNKDDFLEELSELANQEDDRIWSESHLDGYSDFYKENEASKVWWIDKLDAIGEHLFSFDQKKIYNLFVDYPHNMMDKEVEIFDKENPYWKEFLSNRKK*	.	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0034	cloud	direct	high	299	0.997	GCA_013267515.1_00579
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	532988	534406	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	17654	19072	GCA_013267515_1_1_542	GCA_013267515_1_1_542	+	1933377	.	PFAM:PF03354.14	Large-Terminase	MARTKKKLGNQNPTQSVILPYTKKKSLYKEAIDIYERTGLSSYPWQQNLLKAIMAVDKTGVWVHQKFGYSIPRRNGKSEILYILELWGLEHGLNMLHTAHRISTSHSSFEKVKRYLEKMGYEDGEDFNSIRAKGQERIELYKSGGVVQFRTRTSNGGLGEGFDLLIIDEAQEYTTEQESALKYTVTDSDNPMTIMCGTPPTPVSSGTVFTKYREACLFGKGKYSGWAEWSVNEEKEIDDVEAWYNSNPSMGFHLNERKIEAELGEDKLDHNVQRLGFWPTYNQKSAISETEWNVLKVEGMPKLSGRLFVGIKYGQDGTNVSMSIAVRTADKRIFIETIDCQSVRNGNHWIVAFLKQADVSQIVVDGASGQKVLDDELKDYKIKNVILPTVKEIITANSLWEQGIYQHTICHNGQPSLTKVATNCDKRNIGSNGGFGYRSHFSDMDISLMDSALLAHWACVTTKPKKKQKISY*	hallmark_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0035	cloud	direct	high	1418	0.999	GCA_013267515.1_00580
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	534482	534946	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	19148	19612	GCA_013267515_1_1_543	GCA_013267515_1_1_543	+	1933377	.	PDB:6B0X_d	Major-Capsid-protein	MRMSEFKAITTQEEFDAAIKSRLVREKEKYSDYDQLKSRVAELETENGGLKSSIEASNQSKAEADKQVADLQSQIAGFETEKLRTRVALEHGLPLDLAARLQGDDEEALKADAEKLAGFMKIKKPVPPLKGNEPNLGNDEDAALRGMLRNMRGE*	hallmark_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0036	cloud	direct	moderate	458	0.985	GCA_013267515.1_00581
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	534950	535840	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	19616	20506	GCA_013267515_1_1_544	GCA_013267515_1_1_544	+	1933377	.	PDB:3JB5_B	Major-Capsid-protein	MATLQSGDLFPVETVQDIFSKVKGHSTLAKLTTQEPIPFTGTETFVFNLEGNAEIVGEGNPSSAGNATMKPKVIKPVLITYQARVSEEFVHCSEEKQLSYLKSFIDGLAKKVAQAIDIASFHGLEPKSMTDASFKATNSFDGLITGNVVTYEADKIDENIDAAVATITANDCEVNGIALSPAAGAALGKIKVNGVVQYPEYRFGQNPDSFYGMKSDVNKTLTTVASTAKKDHVIVGDFENAVKWGYAENIPLEIIEYGDPDGAGRDLKRYREVCLRTEVYAGWGILDEQAFARVEA*	hallmark_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0037	cloud	direct	high	890	0.999	GCA_013267515.1_00582
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	535842	536048	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	20508	20714	GCA_013267515_1_1_545	GCA_013267515_1_1_545	+	1933377	.	cd12935	LEM-like domain of lamina-associated polypeptide 2 (LAP2) and similar proteins. LAP2, also termed thymopoietin (TP), or thymopoietin-related peptide (TPRP), is composed of isoform alpha and isoforms beta/gamma and may be involved in chromatin organization and postmitotic reassembly. Some of the LAP2 isoforms are inner nuclear membrane proteins that can bind to nuclear lamins and chromatin, while others are nonmembrane nuclear polypeptides. All LAP2 isoforms contain an N-terminal lamina-associated polypeptide-Emerin-MAN1 (LEM)-domain that is connected to a highly divergent LEM-like domain by an unstructured linker. Both LEM and LEM-like domains share the same structural fold, mainly composed of two large parallel alpha helices. However, their biochemical nature of the solvent-accessible residues is completely different, which indicates the two domains may target different protein surfaces. The LEM domain is responsible for the interaction with the nonspecific DNA binding protein barrier-to-autointegration factor (BAF), and the LEM-like domain is involved in chromosome binding. The family also includes the yeast helix-extension-helix domain-containing proteins, Heh1p (formerly called Src1p) and Heh2p, and their uncharacterized homologs found mainly in fungi and several in bacteria. Heh1p and Heh2p are inner nuclear membrane proteins that might interact with nuclear pore complexes (NPCs). Heh1p is involved in mitosis. It functions at the interface between subtelomeric gene expression and transcription export (TREX)-dependent messenger RNA export through NPCs. The function of Heh2p remains ill-defined. Both Heh1p and Heh2p contain a LEM-like domain (also termed HeH domain), but lack a LEM domain.	MEYINKETLASIETGCELGGDWVPASEFKEDYKLTVPEIKSKLDELGINYDSKAAKADLLDLLEQHEG*	mmseqs_cdd	nonviral_gene	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0038	cloud	direct	high	206	0.995	GCA_013267515.1_00583
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	536054	536449	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	20720	21115	GCA_013267515_1_1_546	GCA_013267515_1_1_546	+	1933377	.	PFAM:PF09355.9	head-to-tail-adaptor	MENFATVDELQELWRPLKLDEQKRAEALLKVVSALLRVEAEKVGKDLDKLVVVNESYACVVKSVVVDVVARTLMTSTDQEPMTQVSEGALGYTWSGSYLVPGGGLFIKDSELKRLGFKKQRYGVIDIYGTD*	hallmark_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0039	cloud	direct	high	395	0.997	GCA_013267515.1_00584
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	536436	536777	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	21102	21443	GCA_013267515_1_1_547	GCA_013267515_1_1_547	+	1933377	.	PFAM:PF10665.8	Minor-capsid-protein	MARIKGIPVVLIDKVKTGQDDFGHSIFEDKEIEVENVLVSPTTSEDITTQLNLTGRKADYTLGIPKGDTHDWENKEVRFFGKRWQVFGLPLEGIESLIPLDWNKKVTVERYEI*	hallmark_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0040	cloud	direct	high	341	0.997	GCA_013267515.1_00585
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	536767	536994	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	21433	21660	GCA_013267515_1_1_548	GCA_013267515_1_1_548	+	1933377	.	Uniprot:A0A0C5ADH8_9CAUD	type-I-neck-protein	MKFKLNRAGVADLMKSGAMQTVLNKHASNIKNRCGDGYEQDVYVGRNRANAMVSAKTTKAKKDNLKNNTLLKAVR*	hallmark_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0041	cloud	direct	high	227	0.996	GCA_013267515.1_00586
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	536995	537330	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	21661	21996	GCA_013267515_1_1_549	GCA_013267515_1_1_549	+	1933377	.	PDB:2LFP_A	tail-completion-protein	MIEIIIKKYLDGHLDVPSFFEHETKMPDSFILIEKTSGSERDHSKSATFAFQSYASSMQKAAKLNEKVKEVVKEMVELNSISGVHLNSDYNYTDTETKRYRYQAVFDINYF*	hallmark_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0042	cloud	direct	high	335	0.997	GCA_013267515.1_00587
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	537346	537897	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	22012	22563	GCA_013267515_1_1_550	GCA_013267515_1_1_550	+	1933377	.	UniProtKB:F8S0S2_9CAUD	tail-protein-	MSKSSNVTTAKPKVGGAIYSAPLGTELPTDATTALNAAFKSLGYISEDGMTNTNSPESEDIKAWGGDVVNSSQTEKKDTFGFTLIEALNVEVLKEVYGSENVSGDLSTGIEVKANSKELKDHCLVAEIVMKNGVLKRIVVPQGKVTEIGEISYKDGETVGYQTTVTAFPDKDQNTHYEYIKGA*	hallmark_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0043	cloud	direct	high	551	0.998	GCA_013267515.1_00588
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	537900	538238	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	22566	22904	GCA_013267515_1_1_551	GCA_013267515_1_1_551	+	1933377	.	.	hypothetical protein	MSKSKKNKVKTPSKQVAKMNLPELNSNVIKGTTSTGFKFEVSQERLANYELVEAIADVDKNPLVLPKLVKKLLGPQAEDLKEHVRDENGLVPLNRLMAEIEEIFNSKTSLKN*	.	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0044	cloud	direct	high	338	0.997	GCA_013267515.1_00589
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	538253	538627	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	22919	23293	GCA_013267515_1_1_552	GCA_013267515_1_1_552	+	1933377	.	pfam17318	Family of unknown function (DUF5361). This is a family of unknown function found in Bacteria.	MIKADEDALICDLAETYHIYDYRQLPALKVAVFSIGLRDDSRIKMKLSNQKVSTETLLLAGIFDRLSTLAWFKTADGQKGTNRPESIVEQLTAEPQERKERVFTSGEEFERARKEILEKIGGEH*	mmseqs_cdd	nonviral_gene	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0045	cloud	direct	high	374	0.997	GCA_013267515.1_00590
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	538627	541701	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	23293	26367	GCA_013267515_1_1_553	GCA_013267515_1_1_553	+	1933377	.	UniProtKB:R2PRN9_9ENTE	tail-tape-measure-protein-	MATELGQAYVQIMPSAKGISGSIQSALAPEATAAGNSAGSSIGSTLVKAATGIIAAAGIGKAFSAAINEGAALQQSLGGIETLFKGSADKVKAYANEAYRTTGLSANAYMENVTGFSASLLQSLGGDTNKAAEIANMAMVDMSDNANKMGTSMDRIQDAYQGFAKQNYTMLDNLKLGYGGTRTEMERLLADATKLTGVKYDINNLSDVYQAIHAIQGKLDITGTTAKEAATTFSGSFASMKAAAQNVLGKLALGEDIMPSLKALAETTSTFLFKNFIPMVGNILRGLPTVIGTVLKDGIAAIFGDGIAKSITDKIYNIYANVSGVLNALSDMIFGSGNKADNKDFLKSYLGLDEKLASRIVNIGENIRVTFVNIGSTIGNIAGIIGSFVSDLLGIAGGEKSVNAIGSEFESVTGFIKSASEKIKEFTGWLKNSPAALDSLKSAVVGITTAWTAYKAVTSLLRGIEAVRNATLAVTNGLMLAQFVRTGALTAAEAANAAATIGASGAFGIFNAVLSANPIGIVVTAIGALVAGLTWFFTQTKIGKKIWSGFVSWIKQAWQGIADFFVGIWSGISDGAKNLWNGVTDTWNAVVDTIKNAWNGIVEFFSNLWSGITSGVSAAWTAITQTIMTIVQPFIDGFINIWNGIKDGLSQMWEGVKMIFQGAWDFIKSIVLGAVLIVLDIITGNFGKLGEDLGLIWQGISDAVSTIWEGIKTYFMGVVSAIVGYGQSVFENFSNALAAIWDFIKNTASVAWEWIKTTISNLITGLVQGAQNILNGFMSFLSSLWNAITSVAVGAWNGLKSSVQAIINGIVQGAQNAWNSMKQGVSNLVSGIANIFNGLRNINLWSAGRAILDGFLGGLKSAWQGVTDFVGGIAGWIRDHKGPIEYDRKLLIPAGRAIMNGLDEGLRNQFRSVKSTVSNMAGEITDSLEDQPLSIGLSGFESVNPQMDVSNAILTTKMANVAQPQSREIELLSIIAKLANRPTIVSQELDKREISRIIAEPVAEEQARKQAILNAVDGLGWQMN*	hallmark_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0046	cloud	direct	high	3074	1.0	GCA_013267515.1_00591
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	541686	543209	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	26352	27875	GCA_013267515_1_1_554	GCA_013267515_1_1_554	+	1933377	.	PDB:5LY8_A	Distal-Tail-protein	MANELIKVYFNDVELTKWITVLDGFTALGGADYDPTFHNYPILNGSEFIKTRKKLKKIPVPFYVKYEGVADYDALQTSLNVDEPKKLTFSHLPDRVFYAIPSGDLDFKEIKFSGKGTINFSIVDGLAHSKNPRYFEFKKNEQGILEAEIENNGSEEIPVNYRIKLKRESGFVGITSRYGAMQFGKIEETDSVEDKKNVLLSANGTGDFSNWTDGTIFYENKNKKVVTKMTADKNLGGRLGVLSVDFTNTADGACFGAVKELNLPQQAKDWYIWARAWFETGYVSQTGAWCLSVVDSDNHFIAGMAIEKSERTRNKALVVFLMGDGAGGSRVVKSIEFSPTLWVKDNPYSLEGKDQNRNMFDLRKEGDKITYFWYGSYHSFFESKVKDKQAAKVQFFVGQYKGRNSTINELVTHHYLNDFAIYKLNVPYWRDVPNRYPTGAELFIDSTGEVNPEEKGRLYVNNLLAPDDEILGTDYFKVPPGKTKVQLLVSSFAEVESARAEIEEAWI*	hallmark_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0047	cloud	direct	high	1523	0.999	GCA_013267515.1_00592
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	543209	547315	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	27875	31981	GCA_013267515_1_1_555	GCA_013267515_1_1_555	+	1933377	.	PDB:3GUD_A	Neck-appendage-protein	MKRNVRIAIRDTTDTHVVGFFDNKSGIKYNAANLTQFLKGSCSVLVLTYHSKKMVAQSGQKLAFRFKDKDFWLNINSVKKTGYNIELTAYSLSLEANKEKRGPHKPASAMTIKQYIEYYDPENSFVIGINEVADKSLKLEWSGTDTILARLYSVANGFGAELEFVTELNNDYSLKRHIINIYREGNLGKDKTGLPVRVGEKLKVINYSDNMDDFYTGIRRTGKDGLTIAGLNKKIYDDKGNLLFYSSGDTLYAPQARDKYPSIARKTNDGYIVNEDSGTEYANKEALFGYMLSELKKHCELKVDYEVEGAVDGNIGDKKTLIDAQHFDPPLYVQARISEQTESLLKASDVKTSLSNYVRKSSQIANELLQKVEQLALEATPYTIKLATNNGIIFKNNQGQSTVYPTLKKGNKTVECTWQWLVDNQSFETSATFEVRAAGMSNKLVLTAIALIDGKEVAREQVTFSNVNDGAKGDPGKSITITKTERQADGVKVTFSDNKSIVVPKGDKGDPADPKELNQLKQEMNQAKQGLDDVKADLLREKSESSSKIDQVKQDVGAIRNQQTTYEQTNTQNLARITGQLGDKASKSEVKQTADGIREEISRLNTASRNYILNSDMTTATDRTTGTGLPLSSDLIRTLNAERSFTLSVDVVAQNMVAKNDKKRFGISYELKFSDGSNLWTEVFQTSDTALTRISQNFVLPAGKQIVSIAGGLYFQATGQIRLSRPKWGIGHNNKEWIKAVEDTDEQITAARTIFEKTAEGLKTDMAAVKSYVADDGKRREQLEQYTRTETARSAEALRKQASESYVAKSQYSEDARGVARRFEELNLNGTNLLPNTDFKNLIDVGNQFTVGGKTYKVKTLDKWYSSYNDGIPNPKTNYHGYFNETKFSETVFEFNESNGVREWKGLPIFITNDSRYTVGKYIFSVDVNATGEGTHLEVGFYYYNKSGMREFHAGRARKNITSINSWSRISLELSINDDVDFSKEMGFYIYGYGFTSNSVLYFKRPKLTNTNWTPSVEDNNKYTETKIAEYKQTVDGQLAAVKQDVNGKVSQTTFDQRANQITQTVQELNDNVVKKNQIRVNENGIVSTAEKVVNGQTLASMIAQHPEWVEIIAKLLKVKADMIVNGAITADKLNVKKLSALASSLGEISAGLIDLRKHWERTSSEDVWGINRDVTYDTGALLGDFGLLTNGAPTRLQKNDAKPTIMPLVWLNSGELYFANVDSRYDLKQIIVNGVYPFVRTGDAKIRFGKMEDGRDALYIECLLSELYLKANNYTDWKQSEINNKVRWKVQGSLVLVDFNLQFDRDGDYHLADIPKQYVPSNKMFPVQAWSLDRNKDRTAQLNVGGDLHIIGAERGIPYLGQIIWTY*	hallmark_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0048	cloud	direct	high	4106	1.0	GCA_013267515.1_00593
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	547343	547891	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	32009	32557	GCA_013267515_1_1_556	GCA_013267515_1_1_556	+	1933377	.	PF07104.11	Protein of unknown function (DUF1366)	MKFRVANKYLREANKTFVAIRCDEPYTAYDRVLEGDRMNDSDEILTDAVLKIVATELDPTGAIAEMQQKLDKTSDATNKNKDSVERTSKLTDVLILLAISIEGGMQQDLYKKVASLLPTLTDGARYSFGDIVSAPYPYDTNPKYPQGTPVILKFLDNWTHKGQPLQELLQKGACTTIMPKLN*	hhsuite_tools	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0049	shell	direct	high	548	0.998	GCA_013267515.1_00594
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	547909	548193	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	32575	32859	GCA_013267515_1_1_557	GCA_013267515_1_1_557	+	1933377	.	PFAM:PF04531.12	holin	MFVVRNDFVYQVIIFAIPLIGLYWSQKDRAAKHERRITVLEKDIENLREFKKTASRRLDSHEEQNKAILVLAEQVKGLSEDIRELKKIINKKEN*	phrogs_hmm	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0050	cloud	direct	high	284	0.996	GCA_013267515.1_00595
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	548195	548503	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	32861	33169	GCA_013267515_1_1_558	GCA_013267515_1_1_558	+	1933377	.	PFAM:PF04531.12	Phage_holin_1	MSKINWKVRFNAKNKAFIARVFVAVLVPILVYYGLEVKDLTSWDAVFNLVVKAISNPFVIGTAVVNFINILPDPTTAGFSDSDRALGYEEPHGENTETDKGE*	common_virus_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0051	cloud	direct	high	308	0.997	GCA_013267515.1_00596
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	548506	549321	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	33172	33987	GCA_013267515_1_1_559	GCA_013267515_1_1_559	+	1933377	.	PDB:5T1Q_D	Adenosylhomocysteinase	MSRIESSIAEMRRLQAIPVHYDMGDRYGNDADGDERIEYDCSSSVSQALGLSLNNNTETLKSNLPKINYNCVYDGVDGSIDFEYGDVAIWSPRDGSSSLGAFGHVVIMTGPTTMIHCSYGYDGIVESDYNQIWELNGRPRETVFRENGQAAAPQPAPLTNKSQNLKIYRVDDLQFVNGIWQVRCNDLVPVEFDWTDNGIACEDIDLVDENGNLLADQETRAGSLFVINPNKVVSDGEGAYGSGNYYWRNVELSASGRVWLSVWSVDHLLHG*	common_virus_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0052	cloud	direct	high	815	0.999	GCA_013267515.1_00597
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	549568	550515	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	34234	35181	GCA_013267515_1_1_560	GCA_013267515_1_1_560	+	1933377	.	COG4823	Abortive infection bacteriophage resistance protein  [Defense mechanisms]. 	MKQPIPLSWESQIDKYKQRGMIIDDNDVEKLKNISYYRLKEFAAPLANYSDGEISYAGIQFKEVLARYYKDKNLRIFLLHAIEKIEVSIKTRISYILGSGYGAFGYLNFAQWSNKDKHTRFDIEKIQFRIKRNLLKTVKKSQLSELKMKQNHDEDGFPTVWLAIDLLMFGDMVSILEIMSENNIRRVANYYDCTPAELISWMKCLNFVRNVCAHNSNIIDIQITTKPKTRKEWNNLIFMNKEVHKENEFYKPTNKLAIVLIIIVTLVNQINSKYKWNDIQRSVNSLCKSRDDRARLLGFKNFQSAKDVIRSIKQL*	mmseqs_cdd	nonviral_gene	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0053	cloud	direct	high	947	0.999	GCA_013267515.1_00598
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	550644	550901	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	35310	35567	GCA_013267515_1_1_561	GCA_013267515_1_1_561	+	1933377	.	.	hypothetical protein	MKILNIKLTDINHTKLGFEHWVAVTYQVPILKSEYTVKLVLIMDFEIKDKAVLDYIIKEWRYRDLVRHSCQMYSMENKEKVIHMY*	.	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0054	cloud	direct	high	257	0.996	GCA_013267515.1_00599
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	551551	552333	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	36217	36999	GCA_013267515_1_1_562	GCA_013267515_1_1_562	+	1933377	.	PRK05299	30S ribosomal protein S2; Provisional	MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKFADQAYDFMRDAAANDAVILFVGTKKQAADAVKDEAERAGQYYINHRWLGGTLTNWETIQKRVARLKEIKRMEEDGIFDVLPKKEVALLNKQRARLEKFLGGIEEMPRIPDVMYVVDPHKEQIAVKEAKKLGIPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAIIEGRQGEDNVESVEAELAATDTQADSIEEIVEVVEGTNE*	mmseqs_cdd	nonviral_gene	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0055	persistent	direct	high	782	0.999	GCA_013267515.1_00601
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	552416	553459	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	37082	38125	GCA_013267515_1_1_563	GCA_013267515_1_1_563	+	1933377	.	COG0264	Translation elongation factor EF-Ts [Translation, ribosomal structure and biogenesis]. 	MAEITAKLVKELREKSGAGVMDAKKALVEVDGDIEKAIELLREKGMAKAAKKADRVAAEGLTGVYVSGNIAAIVEVNSETDFVAKNAQFVELVNETAKVIAEGKPANNEEALALIMPSGETLEAAYVSATATIGEKISFRRFAVVEKADDQVFGAYQHNGGRIGVITVLSGSDEDLAKHVAMHVAAMKPSVLSYKELSEEFIHDELAQMNHKIDQDNESRAMVGKPALPHYKFGSKLQLTDEVIAQAEEDIKAGLAAEGKPEKIWDKIIPGKMDRFMLDNTKVDQQYTLLAQVYIMDDSKTVEAFLESQGVTIAGFTRFEVGDGIEKAANDFESEVAATMAAALGQN*	mmseqs_cdd	nonviral_gene	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0056	persistent	direct	high	1043	0.999	GCA_013267515.1_00602
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	553536	553886	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	38202	38552	GCA_013267515_1_1_564	GCA_013267515_1_1_564	-	1933377	.	.	hypothetical protein	MKMDWFKYTRHVLVWWFSTLFFFTIISADYVDVQVATLVACLFAPFLFEPSSIKPKTKWIIDLAIIVISVFAVLFTQTYRIAFTYSEITYLLISLIILILIDLVISHKGFTKRIVK*	.	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0057	persistent	direct	high	350	0.997	GCA_013267515.1_00603
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	554145	554606	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	38811	39272	GCA_013267515_1_1_565	GCA_013267515_1_1_565	+	1933377	.	COG4463	Transcriptional regulator CtsR [Transcription]. 	MSSKNTSDSIEEYIKTLLAQAGIAELKRSEIADVFQVVPSQINYVIKTRFTESRGYIVESKRGGGGYIRIGRIEFSNHHALLCDLLHSVGEQISHQVFTDIIQLLFDEQIMTEREGNLLLATTTDRVLGTNAAQIRARMLKKILQQVDRKGKN*	mmseqs_cdd	nonviral_gene	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0058	persistent	direct	high	461	0.998	GCA_013267515.1_00604
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	554610	557039	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	39276	41705	GCA_013267515_1_1_566	GCA_013267515_1_1_566	+	1933377	.	PDB:4M4W_K	Replicative-helicase	MKYSKALTESIESAQLLASHFETDYLESWQLLIAMANNPYSVAGSVLNDYPLEIDDFEKAAFHITGKVYQQEGDFTIWPFSYRMKVLFLTAEQIAGAVHANNLGTEHILLAMLFDQGSLAARILEFIGFSYEDKEGVLRMTDLRKNLEHKASWNKEDLKAIRHLNKSAAATRQTMANMMGMPPATSGGLEDYTRDLTEMAHMGLLEPVIGRDKEISRILQILSRKTKNNPVLVGDAGVGKTALALGLAQRVADGQVPNELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEADGHVILFIDELHTIMGSGSGIDSTLDAANILKPALAKGTLRTIGATTQEEYQKYIEKDAALSRRFAKVTIEEPTVADSIAILQGLKKSYEDHHKVVITDSAIETAVKYAHRYLTSKHLPDSAIDLLDEAAARVQNKSPQNHVKAELSAADEALMAGDWNKVGTLVEKESQPIVYKLRVKDEDVLATLSSLSGIPVQKLTQTDAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGSFLFLGPTGVGKTELAKALAEVLFDDETALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATSLRDDKTVGFGARDVRFDHENMEKRMMEELKKAYRPEFINRIDEKVVFHSLTSEDMQEVVKIMVQPLISSLAEKGIKLKFQPSALKLLAQEGYDPEMGARPLRRILQTRVEDHLSELLLAGELKTGQSLKVGVKAGKLKFEVL*	rep_hall_hmm	common_virus	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0059	persistent	direct	high	2429	1.0	GCA_013267515.1_00605
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	557086	557526	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	41752	42192	GCA_013267515_1_1_567	GCA_013267515_1_1_567	+	1933377	.	PRK03624	putative acetyltransferase; Provisional	MNIREMVEADYDQVYQLWLSCAGMGLNHLDDSKEGIAQFLKRNPQTCLVAVENQIIIGAILVGFDGRRAYIYHTAVHPNYRRRGIARQLVETVLTVLDELKIHKVALVVFKRNTEGNRFWETLGFSTREDLIYRNQARTEMVRLDT*	mmseqs_cdd	nonviral_gene	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0060	persistent	direct	high	440	0.998	GCA_013267515.1_00606
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	557597	558568	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	42263	43234	GCA_013267515_1_1_568	GCA_013267515_1_1_568	-	1933377	.	TIGR00737	putative TIM-barrel protein, nifR3 family. This model represents one branch of COG0042 (Predicted TIM-barrel enzymes, possibly dehydrogenases, nifR3 family). This branch includes NifR3 itself, from Rhodobacter capsulatus. It excludes a broadly distributed but more sparsely populated subfamily that contains sll0926 from Synechocystis PCC6803, HI0634 from Haemophilus influenzae, and BB0225 from Borrelia burgdorferi. It also excludes a shorter and more distant archaeal subfamily.The function of nifR3, a member of this family, is unknown, but it is found in an operon with nitrogen-sensing two component regulators in Rhodobacter capsulatus.Members of this family show a distant relationship to alpha/beta (TIM) barrel enzymes such as dihydroorotate dehydrogenase and glycolate oxidase. [Unknown function, General]	MTNLNTPFLIGDVKIPNRTVLAPMAGVTNSAFRTIAKELGAGLVVMEMVSDKGIQYNNKKTLHMLHIDEEEHPVSIQLFGSDEDSLARAAEFIQENTQTDIVDINMGCPVNKIVKNEAGAKWLKDPEKIYSIINKVRSVLDIPLTVKMRTGWADASLAVENALAAEAAGVAALAMHGRTREQMYTGHADLETLHNVAQALTKIPFIANGDIRTVQDAQQRIEEVGADAVMIGRAAMGNPYLFHQINHYFETGEILPDLSFEDKMQVAYDHLKRLIDLKGEHIAVREFRGLAPHYLRGTAGAAKLRGAIAQANSLVEIEALLQV*	mmseqs_cdd	nonviral_gene	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0061	persistent	direct	high	971	0.999	GCA_013267515.1_00607
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	558555	559517	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	43221	44183	GCA_013267515_1_1_569	GCA_013267515_1_1_569	-	1933377	.	PRK00114	Hsp33 family molecular chaperone HslO. 	MVRGRTTKSLSYEILIFVPLPFLFYVTIKGMDKIIKTISENGAFRAYVLDSTETVRTAQEKHQTLASSTVALGRTLIASQILAANEKGDTKITVKVLGTSSLGAIITVADTKGTVKGYVQNSGVDIKKTATGEVLVGPFVGNGEFLVITDYGTGNPYHSMTPLVSGEIGEDLAFYLTESQQTPSAVGLNVLLDTNDKVKVAGGFLLQVLPGAKEEEITHFEKRIQEMPAISTLLESENHIEALLSAIYGNEPYKRLSEEELRFQCDCSKERFLNALLSLPKSDLEEMRDEDHGAEITCQFCQSTYHFDEKDLEELIRDKS*	mmseqs_cdd	nonviral_gene	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0062	persistent	direct	high	962	0.999	GCA_013267515.1_00608
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	559636	560907	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	44302	45573	GCA_013267515_1_1_570	GCA_013267515_1_1_570	-	1933377	.	PFAM:PF05816.10	tellurite-resistance	MSQEFNFDIDKIANNAISKTDRTTEIIESTETQANGQMNFLEKLTPEQQDAIIAKAPQLVDNFISDQNTLLDFGQAAVEEVNNTVNRILAEQKKLQIPQVDELLKNANKELNGFVSKYKDTQIAELDKKPNFLEKLFKQSKNTLQEFYFDSQNIEQKMDSMAATVVKQEDLLARNIVSAEMLIEDNTKSIENLVGVISFIEATQKEAGARASTLQNEVAQLDTATLDYQTKSQELARLTEVVNTLEQQHTEYISRLYVAWATTPQMRNLVKVSSDMRQKLGMLRRNTIPTMKLSIAQLGILQQSMKSGQVADAISNANNAALQMLAETSKEVIPQMERISQNPTIAVESVTKLAESLVAQNQGIISAIDKGREKRALLEATVIKSAETINDSVKLRDQKIIQALLDQGKEIQKEVDKPTTSET*	phrogs_hmm	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0063	persistent	direct	high	1271	0.999	GCA_013267515.1_00609
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	560926	561744	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	45592	46410	GCA_013267515_1_1_571	GCA_013267515_1_1_571	-	1933377	.	PF10112.9	5-bromo-4-chloroindolyl phosphate hydrolysis protein	MPRRNYNNVRSRRWIGILLILIAVGIIIQYLIPILLSIGIGYGIYYYATHKPKKITEPSASQQIEDLKKEIRAADSRIKQLDNYLKEKSYANYQQLADQLLPQLSYIQGRADTLKKYISSEIYQRIQRKVQDVTTDIHEQLHNLRAQTSESLKPNLEELAPELLETIHNIQIDHEAILKKISQSESNNKEELTAIHQSQMEHYEDILEGYLKIKTSPKDFYNAEERLSSAKAAIEQFDLDLDETLRQLNEADLRDFDISLRILSKKEHNTEL*	hhsuite_tools	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0064	persistent	direct	high	818	0.999	GCA_013267515.1_00610
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	561987	562430	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	46653	47096	GCA_013267515_1_1_572	GCA_013267515_1_1_572	+	1933377	.	cd08287	formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family.  The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones.  FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.	MKAAVFVKLGRMEVYEVARPGAIVGRVSVPHTGDINIGDYWMANLAMAGGPASCTTYDKEVLLKAVLDGQINPGKVFTQSYTLDDIDQAYKDMADRKTIKAMIVMWREVVPIFAIQSQFNEWSTTLSRSLFYRLHFCLKVLNYLNFW*	mmseqs_cdd	nonviral_gene	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0065	cloud	direct	high	443	0.998	GCA_013267515.1_00611
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	CDS	562465	563022	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	47131	47688	GCA_013267515_1_1_573	GCA_013267515_1_1_573	+	1933377	.	PFAM:PF06852.11	acetyltransferase	MSLTSQIITAEFPDLEKVEQLNTEAFPEEERAPLSELLRYGDGEYSHFFAFYDGNEFVGFAFSVYNERAFYISFFAIMPHLRSHGYGGKIIDKLVDFYQRTMVLEVERLDEPCGNLEQRKARMDFYKRNGFRSSHAYLEYDGLSFEILYKGAFFDEEAYRDIFKKIQEDGYFEFEIKHGHGRDWE*	phrogs_hmm	hypothetical_protein	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_CDS_0066	persistent	direct	high	557	0.998	GCA_013267515.1_00612
GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote	cenote	tRNA	551182	551253	GCA_013267515.1	CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515.1_CP053999.1	GCA_013267515.1|CP053999.1	GCA_013267515_1_1	GCA_013267515_1_1@C42	35848	35919	tRNA-Cys	tRNA-Cys	-	1933377	.	tRNAscan-SE score: 55.6	Cys	NA	tRNAscan-SE	.	C42	47688	515335	563023	GCA_013267515.1|CP053999.1@region_515336_563023@tool_cenote_tRNA_0001	.	.	.	.	.	.