core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	1	1322	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	1	1323	GCA_013276675_1_52_1	GCA_013276675_1_52_1	-	17749	.	PFAM:PF07902.10	minor-structural-protein	MDALTRRQFDRAMFAKERTLTIRVGDYTSRDIKEASFEYGYIKGDTYKPGGTCAGSGKITFTSIITTFNKLDTLHPEIGLLVGDTYQWVKMGEYFINDIEIDRNRNTTTLELMDGMFKLNREYVTDLHFPAEVREVIQEICLKTGIELANDYFGISAMRYHVEQVPEGKKLSFRDMLSAMTQMIGMSCFFNREGKMEIRDLTESNITINADSYFLHGLTKSEIEYQIAGITCKTDKKPLTVGMKTGRSLELDNVFMTQSALNDLYYKLKNLTYYPYNLNYQGHLLLEVGQWVTIQTNKKETFKVPVLSQSFTFKGGLRGRISADSKAGNDTQYSYEGTITKQIKQQDGIEAKIQAQIEAADKDFDQKVDKIKKDFNDQVELAKAKAEEVKQEVSDTINQRFNSFHDEPLRESRRKAEEALRQAGASSSLAQEAKQIGLDSV	common_virus_hmm	common_virus	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	1327	1677	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	1328	1678	GCA_013276675_1_52_2	GCA_013276675_1_52_2	-	17749	.	.	hypothetical protein	MAQLTINGVAVKPPKSFQVGIQDIDGETGRNANGDMVRDRITTKRKLDCEWGMLTQEEMSQLLHAVSSEFFEVSYSDPMDGQVTKTFYVGDRTAPSYSFTEKFKPWSGAKFNLVER*	.	hypothetical_protein	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0002	shell	direct	high	350	0.997	GCA_013276675.1_01289
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	1686	4733	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	1687	4734	GCA_013276675_1_52_3	GCA_013276675_1_52_3	-	17749	.	UniProtKB:A0A0R1V141_9LACO	minor-tail-protein-	MAMIESTEAFKKFANGQSWQQLDYQTQQQIRLMAILEQATAKYGNTLSNSVNGRISLFKSLMKDAALNLGNSMLPIINAIMPVLNSFAMVLKNVTAKLAEFIALMFNKKATVKDGVGGAVGDMGNAMKDAAGGAGDLADAVDDAGDSAGGLADNLGDSAKNAKKAAKELLGLLGFDEINILQKPKDDDAGGSVGGGKGGKGKGGGGGPFKDILPEVELTDMDNQFKSIFDGLGDKLKGLFDLFKKGFDAAFRPEGIERIKTALDQIAKTMGEIATDPRVVNAFNRMAEKIAYALGQVTGSIATIGLGIGVFLAESIANGLGRQKERITRTLVALFDNIGNIAEAVGNIAQAFSSAFYDVITSTGAVRIGSAIVSTLLSLTSTIVEVGSKLAGSLFKGFEKVVVTSAPKISSMLQSLLDIVAPIFETIESVVDKFGDGLSRVYDEHVAPAIDSIANAFNGLIDIIQILWEGSWKPFAEFLSNTFGISIETVADLVGGIILEALKLLADTIKLVADGFTAFSDWCKENKEIISTIANAIGTLATVWQGIKFLSWAEQAGGLAGAFELLSGKVSFIVSGIKDLGLALKALTFDKLVSFGETIYLNALYAKDFVVNSGKLIAELGKTALELGKSALAWGVHAAQMGLAAAAEIAQSIAAGVAAAATWALNGAIAVLTSPITLVIAAIAALIAIGVLLYQNWDTVVEFAKTAWQGLCDFISGICQAIGEFFSGLWTKLQEIFEPIGQWFGEKFQQGWDAISNTFSKLGSWFGDRWNESKDALAEANTWLGDKFKSGRDKVNSAFEKVGSWFGDRWNDIKDGVKEADTWFGEKFESAKKKTQNPFQKIGSWFGDRWKNMQDALKEIPNWFKNLFNDAMDNAKNIVKSGIDKLKSFFNFDWSLPKIKLPHFNISGSFSLMPPRIPSFSVDWYARGGVFNSPSIIGVGEAGQEAVMPLERNTGWISILAQKLAERMPANNVPTGYSLPAGDIVIQIAGHEFGRVAIQEINKEHERAGQTLLKI*	hallmark_hmm	common_virus	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0003	shell	direct	high	3042	0.998	GCA_013276675.1_01290
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	5035	5598	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	5036	5599	GCA_013276675_1_52_4	GCA_013276675_1_52_4	-	17749	.	PFAM:PF04582.11	tail-length-tape-measure-protein	MATLDELKVMIDAEIAPFRKKMKEVENQVKGTSDQVKNATAKIREQSSSIGSAFGKLAKFAGFAILGKKLLDVGMYSTQTALEVSAAMNQIKRQMGESSQSFLKWVNDNANAMNMGVGEATNYGAVYSNLFSGFIKDTNKLSAYTAKMLQTSAVVAEGSGRTITDVMERIRSGLLGNTEAIDFCRTA*	phrogs_hmm	hypothetical_protein	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0004	shell	direct	high	563	0.998	GCA_013276675.1_01291
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	5585	5935	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	5586	5936	GCA_013276675_1_52_5	GCA_013276675_1_52_5	-	17749	.	.	hypothetical protein	MFLDIGGKPLDFWDLTVLEIREMIESYNRVKIQERKEKIIDSYRLSQMISNHVSLFLSKDAKVFEFWEYAPELFVEEQQAVEQERQRQALLLHKERMREFAERHNRKRKEEMNGNS*	.	hypothetical_protein	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0005	shell	direct	high	350	0.997	GCA_013276675.1_01292
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	5974	6354	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	5975	6355	GCA_013276675_1_52_6	GCA_013276675_1_52_6	-	17749	.	PFAM:PF12363.7	tail-assembly-chaperone-protein	MALPYSIWKISDEKELKLRLSSHQAAKVEEKIGMNLLKIFMPEAGEEFPLPPLKVVLLLIHGALQKYENGYSLEDVYDLYDEYVDNGGDQTTFMTEVLMPLFEVSGFTPRGSKGKKTSKKKMTVVE*	hallmark_hmm	common_virus	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0006	shell	direct	high	380	0.997	GCA_013276675.1_01293
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	6359	6772	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	6360	6773	GCA_013276675_1_52_7	GCA_013276675_1_52_7	-	17749	.	PFAM:PF16463.4	tail-tube-protein	MLANGITLSYSETKGSYTKLVGLKEVPEFGIEPEKVENTTLEDKVKKYEFGIGDAGELEYKFSYNNSSETAPYRVLRKAADDKKKLYFEQAYPDGTKVNFEGQVSVKLGGGGVNAVIEFTLKIALQSELEFTDGLGG*	hallmark_hmm	common_virus	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0007	shell	direct	high	413	0.998	GCA_013276675.1_01294
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	6775	7143	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	6776	7144	GCA_013276675_1_52_8	GCA_013276675_1_52_8	-	17749	.	PFAM:PF05657.10	tail-component	MINIKPVIYKELQKVADNVTDTYPSDWETFPVVIFLEEQNKPGDWFDDQEQKSSIRYKVDIFDDTSTSELAVKINQIFESLGLRRTDCQDVPDPSHLRHKVMRFEGVVDLHSELVFQFRMEN*	hallmark_hmm	common_virus	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0008	shell	direct	high	368	0.997	GCA_013276675.1_01295
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	7140	7655	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	7141	7656	GCA_013276675_1_52_9	GCA_013276675_1_52_9	-	17749	.	PFAM:PF04883.11	putative-tail-component	MSELRGADRLIAKCRRLASKKTGEDIVLRAVHNAAIKVVQADAKRLAPGNNGELRNSIKTRVKMDGDKAIGEVYTNLHYAPYVEFGTGPKGQASHSGISPEVSVTYRSSPWYVHEDQINVGPYHFQKIGEFYKMYGQPAQPYLYPALRDNQERVSKNISDYVRRKIREQIK*	hallmark_hmm	common_virus	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0009	shell	direct	high	515	0.998	GCA_013276675.1_01296
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	7630	7968	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	7631	7969	GCA_013276675_1_52_10	GCA_013276675_1_52_10	-	17749	.	PDB:2KX4_A	head-closure-knob	MFLKQSRLKPYPMRRFEKTVTEEGVVKEGYAKEAETVRLELWPASSKLQSEMYGERVNDILNANANKSATIKVKDGVCIDSPTEVTHRVISKKVYTYHQVLELERVRATRGR*	hallmark_hmm	common_virus	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0010	shell	direct	high	338	0.997	GCA_013276675.1_01297
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	7949	8260	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	7950	8261	GCA_013276675_1_52_11	GCA_013276675_1_52_11	-	17749	.	PFAM:PF05135.12	head-tail-adaptor	MSIELLKKMTGEEDTQLLMLLQTRATNLILSETNRTSLTPALSRLIPEVAIELHNRSGAEGEHSRTEGGIAVVYGENGLSTGLLQRIRMHRLARVAGHVFEAE*	phrogs_hmm	common_virus	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0011	shell	direct	high	311	0.997	GCA_013276675.1_01298
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	8262	8450	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	8263	8451	GCA_013276675_1_52_12	GCA_013276675_1_52_12	-	17749	.	.	hypothetical protein	MKFKIKQDFYDWELNVKRLAGEELEITEERYAELADNFASNGVAISDVLEEILPEPEFLEED*	.	hypothetical_protein	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0012	shell	direct	high	188	0.995	GCA_013276675.1_01299
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	8440	8622	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	8441	8623	GCA_013276675_1_52_13	GCA_013276675_1_52_13	-	17749	.	PFAM:PF09124.9	endonuclease-VII	MSLLLRRHYIQEEQAGQYSDLENKTLEELKNLAKEAGITGAYKLSKAEIVEVLEDLKSEI*	phrogs_hmm	hypothetical_protein	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0013	shell	direct	high	182	0.995	GCA_013276675.1_01300
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	8634	9476	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	8635	9477	GCA_013276675_1_52_14	GCA_013276675_1_52_14	-	17749	.	PDB:4AN5_F	Major-Capsid-protein	MTAGQTKLATMVNPEVMADMVSAKLPKLIKFTPLAYVETALQGQPGNTLTVPAWEYAGDATEVGEGQAISPDKLTTKKTTMTIKKAAKGYEITDEALLSGLGDPLGQATYQLGLAIANKIDDDLVAVAKTATQHVAETPTTLEAIDKALDIFEDEEDAQYVAIINPKDATKLKTDVAKEWTKGSELGANMVVSGTFGEVAGVQIVRSKKVEEGKGFLVKVSPSQTQTDDANKYGAFVIMLKRDVAIETDRDILKKTTVITGDKHYGVYLYDPTRVVKFGE*	hallmark_hmm	common_virus	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0014	shell	direct	high	842	0.999	GCA_013276675.1_01301
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	9482	10051	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	9483	10052	GCA_013276675_1_52_15	GCA_013276675_1_52_15	-	17749	.	PDB:6B0X_d	capsid-scaffolding-protein	MNEETQTVETVEEQKVPAEPAQQPQDEKKYTDADVDAIIDKKFAKWKSEQEAKENEAKKLAKMNADEKQKYQLDQREQELADREKAIARKELTAEAKAMLSERDLPVELVNVVDLTSAETVSQSVAVLQKSWEQAVQKGVQEKLKGGAPMKQAPVDSDGITKEEFARMGYQSRNELYQKNPELYKKLKG*	hallmark_hmm	common_virus	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0015	shell	direct	high	569	0.998	GCA_013276675.1_01302
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	10341	11837	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	10342	11838	GCA_013276675_1_52_16	GCA_013276675_1_52_16	-	17749	.	PFAM:PF06152.10	minor-capsid-protein	MDKAEKQADQFDKVYQEAKTYLDKEVNKIFDKFQRDYGLSQVDARQVLKNMKDKKNLNELRKVLEARPNDPNIQRLLADLDSPAYSFRMKRLERLSDDLDRMRESIYHSEKTGSDAFYSDLMKDSYYKATFDLQQQTGLAYGFSGLPESEIKHLQSFSWVGDGSTYSTNIWKNTGKLTSSIKDELLMSLMTGRGTRETAQAIAERFNVGQNDARRLVRTESAFFHNQMELLSYEEADIEKYIFVAVLDKRTSRICQEHDNQVYDRDKAVPGVNCPPMHPWCRSTTVAYDEDADYSKLKRRARNPETGKTELVPADMTYKEWYSKYVAKDVKNEIQDYKKSDQTVSRYNTQKLFSDVSNAWDEIGKGGLSKEQLVGLLKSEYELGNFSSDITKLIGVSSAYIDVSSLATSLVRHGQQYSLDEFMLIKEAVQKPYLILDNSERVEKSIISYVKIPNKDKVIMEAVMVPRDEMLVIHFNKVGIRQVKKNGKNMLTLYKKEK*	hallmark_hmm	common_virus	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0016	shell	direct	high	1496	0.999	GCA_013276675.1_01304
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	11800	12237	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	11801	12238	GCA_013276675_1_52_17	GCA_013276675_1_52_17	-	17749	.	PDB:5A20_A	Portal-Protein	MGLEMITKTKEANYKRGLRQRIAIFAHYLGMKQIALESHSIVPQFSRGLPKNLLEISQIVNNLEGKVTNRQLISLLPFVEDPDAELEALEEEKKKNMEDMPMFNKDNTKPEDEVEDEESGVLGEEESQSDLPADGQGRKAGRPVR*	hallmark_hmm	common_virus	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0017	shell	direct	high	437	0.998	GCA_013276675.1_01305
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	12467	13000	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	12468	13001	GCA_013276675_1_52_18	GCA_013276675_1_52_18	-	17749	.	PFAM:PF05551.10	homing-endonuclease	MIKDKMHKHLNQVYYSMLARCYDEKHWAYKWYGKRGIGVSDEFSDVAKFRSWAMQNGVEFGLQLDRIDNDKDYSPSNCRWVPEHTNKRNRSDNVKYKGYILRDYLKKLSEENNISFSTLVYRYYRSIKRDDIIVNDETIDDILLNYKKYDLRQFSKGVDMSGKTIVRDEKGRFVTYY*	common_virus_hmm	common_virus	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0018	shell	direct	high	533	0.998	GCA_013276675.1_01306
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	13129	14148	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	13130	14149	GCA_013276675_1_52_19	GCA_013276675_1_52_19	-	17749	.	PDB:5A20_A	Portal-Protein	MYQYLTYPRDGYDEGSLKKDLIYKLITMHNTESSHLKKLKSYYLGEHAILEHTRRNVNAPNYKTVANHAKDIADTATGYFMGNPIKYNNTADGDIDELLTAFDGAEIDQVDAQNALNMAIYGRAYEYIYAKEGMAELDSTSIDPENTFMVYDDSIERKPLFAVYYYEVKDDTKDTTKYQAEVFTENLHYHMVLRSTDSGTTQNEQVTPHNLGQIPIIEYRNNHFAIGDYEQQISLIDAYNSLMGNRVNDKEQAVESILVLYGTQLADTPEDAKVAMKILSEEGLLELPGDSARAEFLKNTLDESATEILRTALKEDIYTFSHVPNLTDENFAGNTSGVK*	hallmark_hmm	common_virus	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0019	shell	direct	high	1019	0.999	GCA_013276675.1_01307
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	14160	15374	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	14161	15375	GCA_013276675_1_52_20	GCA_013276675_1_52_20	-	17749	.	PDB:5OEA_B	Large-Terminase	MTNKFTKRQEEVLTRVLNDDFFICGLHGAKRSGKTVLNNMVFMNEIARVRETADRLNIDEPMYILAGTSSTSIQNNIIQELYNMFDIEPKYDKHGAFTLCGVKVVQVYTGSISGLKRARGFTAFGAYVNEASLANEQVFKEIISRCSGEGARIVWDSNPDIPTHWLRRDYINSGDDMIIDFHFKLDDNTFMSDRYRENIKNATPAGVFYDRDILGLWVTGEGVVYRDFSENMVVDNVPEDITKVYAGVDWGYEHFGSIVVIGETSGGSAYLLEEHAHQYKEIDFWVDLAKNIKERYGNITFWADSARPEHVARFQREQLRTFNANKAVLSGIEEVAKLMKAGRFFVVSNKVSKFKDEVYQYIWNEKTGEPVKENDDVLDAVRYAIYSQHSQPKATVRRRSDYGL*	hallmark_hmm	common_virus	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0020	shell	direct	high	1214	0.999	GCA_013276675.1_01308
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	15364	15858	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	15365	15859	GCA_013276675_1_52_21	GCA_013276675_1_52_21	-	17749	.	PFAM:PF03592.15	Terminase-small-subunit	MDIGLNQRQKMFASEYLRTGNVYQSAIFAGYSEAYAKTTASKLLENASIKTFIQTETEKMHDENILSAKEALSILSDIARGQRLEEVLMMNPVTGEVDRVTKKADNNTVIKAIAEILKRYPTAKQAEKLELEIEKLKSQIGVDNEQDDKLIDFAKALRGAFDDK*	hallmark_hmm	common_virus	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0021	shell	direct	high	494	0.998	GCA_013276675.1_01309
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	16441	16887	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	16442	16888	GCA_013276675_1_52_22	GCA_013276675_1_52_22	-	17749	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MRLLKSVDVQFTKKNVYDVLENYRSYVRMAGAEYLPKITTTYSFEPKTFTGKNTATENMVIEHVDAEAEVLEIERAVNCIMDPYVRQVIAKKYMDMKIQLSDKAIYMDLGYSESEFYRMLSRGALEFAEAYRKGKLIVFRKFLGDICK*	mmseqs_cdd	common_virus	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0022	shell	direct	high	446	0.998	GCA_013276675.1_01311
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	17017	17232	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	17018	17233	GCA_013276675_1_52_23	GCA_013276675_1_52_23	+	17749	.	PFAM:PF04014.17	transcriptional-regulator	MNTVKTRKVGNSVTVTIPKTLNVPEGQEMFVYKGVDNVIVLAPKIPDPFSGDADLRMEDDFEGVKFLDSEI*	phrogs_hmm	hypothetical_protein	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0023	shell	direct	high	215	0.995	GCA_013276675.1_01312
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	17216	17569	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	17217	17570	GCA_013276675_1_52_24	GCA_013276675_1_52_24	+	17749	.	COG2337	mRNA-degrading endonuclease, toxin component of the MazEF toxin-antitoxin module [Defense mechanisms]. 	MTAKYDYIPEKQDIIWIDFDPSVGREIQKRRPAIVVSRREYSERTGFVAVCPITHGQSRLEEQDLLVPVRSNKVDGSVNPLQLYTFDFRERKAQKITTMDTTSFQKVVQLYNFIFEA*	mmseqs_cdd	nonviral_gene	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0024	shell	direct	high	353	0.997	GCA_013276675.1_01313
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	CDS	17590	17748	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	17591	17749	GCA_013276675_1_52_25	GCA_013276675_1_52_25	-	17749	.	PFAM:PF11753.7	nucelotide-kinase	VHNFVGSLSGASAFFWGNAIKYMLRFQKKNGLEDLKKARKNLDWLIEELEKN*	common_virus_hmm	common_virus	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_CDS_0025	.	unmatched_CDS	none	0	0	.
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	1	1316	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	1	1317	GCA_013276675_1_70_1	GCA_013276675_1_70_1	-	18053	.	PDB:3GUD_A	Neck-appendage-protein	MIYLTEGNRPLNEAYNDEIVHLGNNTYQLTFRFPTSDPKWELLKEETFLTADDLHGEQDFYIFEVEKQQGYIQVYANQVISLLNNYIVSSIEVDRVSGTRVLSAFAGSITRANPFSFFSDIDDRHTLNIKDKNAMEVLAKDKHSILGQWGGDMVRNGYNLRLLKNGGSENESLFMYKKNLSSYQHKTSMKSLKTRITFKTTVKGEGENAVDHDYMVVIDSPLLGNYSQIYEDVVEVNDQDVTDEASLIAYGKQYFRTSMCDMLEDNLEISVVGQSDVAVQMFDVVSIYHEWYGLDVRKKITKYTYSPMAKRLKSIGFGTFQSSLANAIGGIVNDAVLNESRNLHQIFEERLKKEIANADRAFDAEFTKREKAITDAIELAKAKAEEVKQEVSDTINQRFNSFHDEPLRESRRKAEEALRQAGASSSLAQEAKRIGLDSV	hallmark_hmm	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0001	persistent	ambiguous	low	3	0.002	GCA_013276675.1_01594
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	1313	2011	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	1314	2012	GCA_013276675_1_70_2	GCA_013276675_1_70_2	-	18053	.	PDB:2X8K_A	Distal-Tail-Protein	MFYMIINGFNTSTIPHCVVTDFGQVEAAKPRVVEDANLYGANGSYRVLDGGYESYERTFSFYIPKLLDVSTIVEKFQPKDNVLEFSYQLGSVFYADFIGATYSPHGMHAWKLELKLSMQPFRYQKSVEPLIFTASGNVNNPGSVYSEPVIEIEGDGDISLTIGRTTMHLTIRRKVTIDCRHKKQNIYNADGAVQNTLRKRGGFFELAVGSNGLVFTGAVRKVTVRPNWRYIL*	hallmark_hmm	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0002	persistent	direct	high	698	0.999	GCA_013276675.1_01594
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	2011	6186	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	2012	6187	GCA_013276675_1_70_3	GCA_013276675_1_70_3	-	18053	.	PFAM:PF10145.8	minor-tail-protein	MASGTPLGQMYIELGLDVSKFSPTLTGAKNAVKYFQNNVRSLDSTLKGNEKNASLLQAKYKTLGQAIDSQRKVLDEMKKSFDKLEPGTAKFDKAAADIQRENAKLAVMEGQLRGVEKALQDVGRENSWSGKIDALSEKFAKGGEKLRAMGDAMKPVSAALLAGFTLSTKKAIDFESQMNTTKSLLADTIPTADELNSTTQKLGESSKNWAKQYGISTASINEGMQEIIKKGFDANQTIEAMPAILDAAKASGEDFNTVMNATTNILQQFGLSTQDTERVTNSLTFVANKTAAGFADMGAAMEYVGPVAKNVGMNLEETAAAVGLLSNNGIAGEKAGTALRGALTRLLKPSEQNANAMEKLGFSAEEFRSGAIKLPDILDRIKKNTEGMTDAQKSALIATAFGTEAQTAMNILVDQGGDALRNLANETKGATTYTKDLANELSKSSKNGVERFKSSLEVLQINIGQKLLPLLTPVIDKVNQFIDWLSKAPPAVQSLAVGIGGFLALGYPFLNFLGNGATALSILIKHAGKLEGLLKGGLGLAKLTERAGKLKGLLQGGLGLAKVGSEATVLAEGAGAAASSSSLLSGAIGALTNPIGLLVGGAALLAGGLVYLGHKKDEARIKAEEFGSQLSDTARKELRDFQSKVDDTSTAVANFGTHAGDAEKVSEAFRKLHEEVAAGAEKANQRMEELAKKLGFSDEEIAKMKVKNDQVVSNTDAMANQVSEIYKRHNGDASKFSQEEKEIVLNNQREMIKARIEMMELSGEQQKAALQALNGEIGSLNETQLKHTRDVLKKALDEENQLYKTSKDGLKQLLDAKRIDQETYNKKIQELETNHQQTMEALGTKYYQVMQNLDAKVKARTGQSWNYWEEAKKVLEEYGLSYEVIGQKAAEASQKMGDSHSILAKYASDMSKETREANDAWSLLVGNIDENNNFVIKSNVKEVIGEATKSAEGWEQLQFIVKNANINSNARVTIAEALVESGKWSTMTLEEKQLIVQNQAGLQAIFDSENHLRIWNSMPAEVKQLLLENTDVMNKAEEASKALYNYDALTPKQKELLATDENFRKAVARSTDTLTTWNAITPFTKDLKLDPTNVLNNGQLSIDKIMAWNLSNPENKSLNAIDNTSEAVASAKASVNSPKQEKPIDLLAKDQTAGVRNETSAAINAIKQHNPVDILAKNSTSSTVSEVKSVVNSIQDKTVTINAQDNASGVLAGIRSWITRVTGDFFTNVFASRHAHGTNYHPGGLAMVNDQRNSTYKELVTLPDGRSFIPEGRDVLLPLPKGAKVLRADKTKRLMREMGVPKYAAGVGIPSDAKFLREMEEAQAKIVVQTKGDTNSKDSDKVVSEIAILRASMEKILTAILEKPSDTYLDADKISMSVYQRQGAIYAREGM*	hallmark_hmm	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0003	shell	direct	high	4175	1.0	GCA_013276675.1_01595
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	6243	6473	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	6244	6474	GCA_013276675_1_70_4	GCA_013276675_1_70_4	-	18053	.	.	hypothetical protein	MSRKEKACRRYWFWFTIFILYLAFGLYCICTNFVDIFGMLLLSPFIFASLPLYAYLFLGMFIWAFMNMAMDDFYKE*	.	hypothetical_protein	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0004	shell	direct	high	230	0.996	GCA_013276675.1_01596
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	6722	7015	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	6723	7016	GCA_013276675_1_70_5	GCA_013276675_1_70_5	-	18053	.	.	hypothetical protein	MAKVQFTIKNDKGEDVLKKSKEITTRDYRDYLVMNESLTSDLSEVEKLDKQLGFIASLFDDVTVEQLLEYTDFAKVISIFTAIYAHLVGDVDPKEKS*	.	hypothetical_protein	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0005	shell	direct	high	293	0.997	GCA_013276675.1_01598
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	7061	7657	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	7062	7658	GCA_013276675_1_70_6	GCA_013276675_1_70_6	-	18053	.	PFAM:PF04630.11	major-tail-protein	MTVKGTALIGLKSVTIRVHDGQTPTVGQNLFTLEGKDNEGATQTARVTGLSSDPVKTYGSNVAYHVSNRGVGDVKVEMGLLDVPLALYTNALGYGDDDGIYYFGADTVAKNVSILIESNTADGEPVYYGFYKGQLSMDAIDFETLKDKANELATTSVNFTATASSDVATKGRYGAIVYGSDAEKLKKLKGQLNITAAG*	hallmark_hmm	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0006	shell	direct	high	596	0.998	GCA_013276675.1_01599
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	7674	8054	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	7675	8055	GCA_013276675_1_70_7	GCA_013276675_1_70_7	-	18053	.	PFAM:PF05657.10	tail-component	MIKDKLTELYDALEEDESLSGISIKSFERPESLGDGETSIVIIPVGPPMQTAHGSNTSLAKTFLYQINVESTNRVECKELQGRIEKIMEEQGFYQTEGGLEQWIPDIKRYVDVRTYRGMSALYEKY*	hallmark_hmm	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0007	shell	direct	high	380	0.997	GCA_013276675.1_01600
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	8054	8452	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	8055	8453	GCA_013276675_1_70_8	GCA_013276675_1_70_8	-	18053	.	PFAM:PF04883.11	tail-component	MSSGANLKGFDDILRNIEARLGEPVVRRKVNRALKETVEEFEPTFKRAMAVYADTGKTVGAVVHGNVTGTSSGVPMVKLGFKSPRWTIIHLNEFGYAKNGHPRGFGVMRRFFEASKPVFKSKVGMKLKQEFL*	hallmark_hmm	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0008	shell	direct	high	398	0.997	GCA_013276675.1_01601
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	8445	8834	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	8446	8835	GCA_013276675_1_70_9	GCA_013276675_1_70_9	-	18053	.	PDB:2KZ4_A	head-closure-knob	MKRSEGPSYRYKKPESQNGDLRTPLTFYTSKIKKGVDGRDVSYEKAFYTMGQTYSPSMKDVEIATGKAMKAKMTLKIRDPLTDYQPENRHFVEVGDIRLVGKKWQIIDVRPDFANRDFLIVLIGGGRDV*	hallmark_hmm	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0009	shell	direct	high	389	0.997	GCA_013276675.1_01602
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	8821	9009	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	8822	9010	GCA_013276675_1_70_10	GCA_013276675_1_70_10	-	18053	.	.	hypothetical protein	MIKVLKEFYDLKEGVLRQVGERFEATEERFAELKEHLPDYVELEKSSRSRSSKEVVSVNEEE*	.	hypothetical_protein	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0010	shell	direct	high	188	0.995	GCA_013276675.1_01603
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	9002	9292	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	9003	9293	GCA_013276675_1_70_11	GCA_013276675_1_70_11	-	18053	.	CDD:cd08054	Head-Tail-Connector-Protein	MEIEAKLHSLLDPFKERMRIFHSGEDANLSRMLESSQMVITRLVGSGNIHDHQIRELILERARYVYNDQVEFFYENFKADILALSLDKIEMEDSDD*	hallmark_hmm	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0011	shell	direct	high	290	0.997	GCA_013276675.1_01604
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	9306	10421	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	9307	10422	GCA_013276675_1_70_12	GCA_013276675_1_70_12	-	18053	.	PFAM:PF06673.10	Major-Capsid-protein	MMKLGNEFTTARQNFMNAVETGAPMEEQNKLYNEMIEALTDKLQDDAREAARKEIATMNPYDAQLTAEAREFFNNIEKLPPKGIEKLFPQETIDRIFEDMVAARPLLQHIGLRNAGIRLKFLKSSRTGQAVWGKINAEIQGQLKQEFAEEEAIQSKLTAFVVIPKDSEKFGPAWLQSYVSIQITEAFAAALEAGYLNGDGDNKPIGLSRTLTGTAESEKVTYAEKQAQKKPLTFADSATVVKELTEVYKYHSTKADNTTPVAVEGNLVMVVNPVDAWDVKKQYTSLNAQGVYVTAMPYNLILVESVAQASGKVTTFVKGRYDAFVGGGIEFGRFTETYALEDLNLYTAKQFAYGKAHDEKTAAVWTLNIGK*	hallmark_hmm	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0012	shell	direct	high	1115	0.999	GCA_013276675.1_01605
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	10440	11162	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	10441	11163	GCA_013276675_1_70_13	GCA_013276675_1_70_13	-	18053	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MTIIQIKGAIVSNDDRWFYDWLDMDATAPKDIVLPTTGEDVEVHINSGGGDVYAGSEIYTALRAYQGHVTVKIVGIAASAASVIAMAGDQVEISPTAQIMIHNVSAGVRGDHKALLHEAGVLEGFNKSIAYAYIDKTGKALDDLLDLMEGETWFDARSAVNHGFADKVMFESQEAPVLVASQTPVIPRDFIEKIRSAMTPDVELLADLVRDRLNNSLPIPEDKKKEDKTAEPVGLGRFPF*	common_virus_hmm	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0013	shell	direct	high	722	0.999	GCA_013276675.1_01606
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	11143	12291	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	11144	12292	GCA_013276675_1_70_14	GCA_013276675_1_70_14	-	18053	.	PFAM:PF04860.11	Portal-protein	MGFLNLFKRDAPDVGFDFEELERMLGCLQLKSLAIDKSAEFVARIFAKSEFRYMVENHHVTSDWDYILNVRPNKNESASEFWQKVIYRLLTKNEVLIVLSDDKQLLVADAFTRRRYALYDDTFEMVSVGDYTFQRKFAMSDVIFLQYNNNRLQEYVSDLFSDYEKLHTRLVEALARNNQIRGVLATKANGTFDEDKRKKLQRYADNLFKSFTSKTVAIVPTMDGVEYSELTNTVGTTNLSVEELKKLRRQFDDEVADILGLPTALMHGDMADLSNSQKMFNSYCYESLVKKVGDALNHAMVSSAGYANQKKFVIFGEGGLDKFALAENIDKLISSGAMTRNEVRLELGLEAVPGGDSFLITKNYQGENEIEKGGNEDDNHSD*	hallmark_hmm	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0014	shell	direct	high	1148	0.999	GCA_013276675.1_01607
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	12347	13987	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	12348	13988	GCA_013276675_1_70_15	GCA_013276675_1_70_15	-	18053	.	PFAM:PF03354.14	Large-Terminase	MISHPLVDDYIKMAENGEVVVNKERKLLFKIIKEKIYPRDDLYFDNDLIDKFIRFAEKNFFPLAKYQLFLTPFIFLFRKVDEEPHFDEYLYTLARGGGKNGFMSARSSFFISPIYPIRDYDVTITANSEKQGKVSFEEVYETIQRRGLENHFYLTKMSITGRANNSVFSFRTNNPKTMDSARDGCLEFDEIHQFENDKAVKVQRSGLGKIAHVRTFYNGTNGYVREGFYDKLIEKSMQILNGEVDDFRLFPFICKLDSADEVDDMKNWPKANPMLDESTPYAKRLLARTKADYDDLELEPSGRQEFMTKRMNLPEADLEKDVTTRERLLACLRSPGIDLLGKSCVAGFDYASIRDFASVGLLFKNGNEFIWKQHSFARKAFLKAFKLKAPIQEWADRGLFTIVDGPSIDPRLLVEKLNEWSKFYQIELVCADGFRMDLLKPLLEEAGFEYEFLRNPGAIQSKVAPIIEDGFANERFIFENDNSMIWYTDNTYVKEDKDGNKRFLKKEPVRRKTDGFHALIAALYKRELVHESNVGEFLDMLEDWEF*	hallmark_hmm	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0015	shell	direct	high	1640	0.999	GCA_013276675.1_01608
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	13984	14322	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	13985	14323	GCA_013276675_1_70_16	GCA_013276675_1_70_16	-	18053	.	PFAM:PF05119.11	Small-Terminase	MEEYSEKNIKELENQLLSKIGYFSPRKKDAIQYEKVNRYLYLVRLLYELKAKLHEDGLVITVHNGQQRFQKANSLIKEINTTSNQLLAIERSFDFDVENSPVEKATSGSDLL*	hallmark_hmm	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0016	shell	direct	high	338	0.997	GCA_013276675.1_01609
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	14441	14737	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	14442	14738	GCA_013276675_1_70_17	GCA_013276675_1_70_17	-	18053	.	PDB:5H0M_A	HNH-endonuclease	MIEVSTREERNQFYNSSEWRTIRRQALKRDHYECVWCRDEGKVTTTNLEVDHIKELEFYPEFALDIDNLRTLCKACHNKRHNRFDKNDRNFRKDEWWG*	common_virus_hmm	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0017	.	unmatched_CDS	none	0	0	.
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	14951	15493	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	14952	15494	GCA_013276675_1_70_18	GCA_013276675_1_70_18	-	18053	.	CDD:cd01192	site-specific-tyrosine-recombinase	MNIVEPIRDKDDIQAMKDYLREWNERNYILFLFGINSGLRVGDILKIRVKDVQGWYIKLKEQKTGKKKKIKMTKTLKREVREYIQNKPHHHFLFQSRVGKNKPLDRRTVDWILKVAASECGIENIGTHSMRKTFGYHYYKKTKDIAMLMSLFNHSSPAITLRYIGIRQDQQDKAMSNFGL*	common_virus_hmm	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0018	shell	direct	high	542	0.998	GCA_013276675.1_01610
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	15792	16220	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	15793	16221	GCA_013276675_1_70_19	GCA_013276675_1_70_19	-	18053	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MQIELLDIIDEKKTRKEAIKVLKKYSRLRRIAGEEYAPKITISYSLEPKSSSGQTSKQVESMVLRRVSAQQDLELIAKAINNLSDMEYTRILIERYCRKKRREDYSIYSELGYSSSEYYRILNKALLEFAESYQASNLLVYK*	mmseqs_cdd	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0019	persistent	direct	high	428	0.998	GCA_013276675.1_01611
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	16291	16521	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	16292	16522	GCA_013276675_1_70_20	GCA_013276675_1_70_20	-	18053	.	PDB:2FJR_A	Repressor-protein-CI	MKDKLNPRQASRFAFLLKQKRKERKLSQEKLAAKLGYSRYLIAKWEKEESVPNIYNVEDICTYFAFPADIILGSRA*	common_virus_hmm	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0020	shell	direct	high	230	0.996	GCA_013276675.1_01612
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	16511	16690	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	16512	16691	GCA_013276675_1_70_21	GCA_013276675_1_70_21	-	18053	.	PFAM:PF04936.11	host-nuclease-inhibitor	MNEYALYQGETFVTIGTLEEISKETGIAERMLKYYTFASTQKRHPNGRAVIKIEVDDEG*	phrogs_hmm	hypothetical_protein	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0021	shell	direct	high	179	0.994	GCA_013276675.1_01613
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	16683	16919	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	16684	16920	GCA_013276675_1_70_22	GCA_013276675_1_70_22	-	18053	.	PFAM:PF11753.7	nucelotide-kinase	MNPEIIDNINKPSHYQGANGLEAIDVVHNFVGNLSGASAFFWGNAIKYMLRFQKKNGLEDLKKARKNLDWLIEEMEHE*	common_virus_hmm	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0022	shell	direct	high	236	0.996	GCA_013276675.1_01614
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	16916	17338	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	16917	17339	GCA_013276675_1_70_23	GCA_013276675_1_70_23	-	18053	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MTPKFRVWDSVEKKFVEHFFITDNGLICNMEKPTSDSKLLIPIEKSELILMQSTGLKDKNGVEIFEEDVVSRNSGMPSVVKFGKWIYEEDFGYKIKNIGFHLNSSYDDEWFQAMDYEDIRKNYEVIGNIYENPELLEDKE*	mmseqs_cdd	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0023	shell	direct	high	422	0.998	GCA_013276675.1_01615
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	17335	17826	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	17336	17827	GCA_013276675_1_70_24	GCA_013276675_1_70_24	-	18053	.	PFAM:PF03819.16	MazG-like-pyrophosphatase	MNTLEKVKQWFIDRDLENGGRLDKQSLKLSEEFGELCAGYLKKNEKLTKDSIGDCAVVIVGLGLLSKVDLDSIFEESKNVRKNDIMTSFAYANTCISNIQTEQHLKLMTLRIKSLTLLIGHLKSISKSLGYDFEECFELAYQEIKDRKGRWIDGSFVKEEDLA*	phrogs_hmm	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0024	shell	direct	high	491	0.998	GCA_013276675.1_01616
GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote	cenote	CDS	17823	18050	GCA_013276675.1	VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675.1_VMLL01000058.1	GCA_013276675.1|VMLL01000058.1	GCA_013276675_1_70	GCA_013276675_1_70@C0	17824	18051	GCA_013276675_1_70_25	GCA_013276675_1_70_25	-	18053	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	SAGLNIWQMDRIRDLEEKKPLVIYKADNAGAEIFGKVVEKGRHGKLYTITIRDYGVFVVTKDVYEKIRVGDEVLL*	mmseqs_cdd	common_virus	C0	18054.0	0	18054	GCA_013276675.1|VMLL01000058.1@region_1_18054@tool_cenote_CDS_0025	persistent	direct	moderate	204	0.895	GCA_013276675.1_01617
GCA_013276675.1|VMLL01000071.1@region_1_6302@tool_cenote	cenote	CDS	1	209	GCA_013276675.1	VMLL01000071.1	GCA_013276675.1|VMLL01000071.1	GCA_013276675.1_VMLL01000071.1	GCA_013276675.1|VMLL01000071.1	GCA_013276675_1_85	GCA_013276675_1_85	1	210	GCA_013276675_1_85_1	GCA_013276675_1_85_1	-	6302	.	.	hypothetical protein	MRDRVRIMLGSREIVKRYIGDRLVWSSGPSLLLEVLNTRMWQYWGGYNIDIKGNDIKVAAIRYVQLNNSK	.	hypothetical_protein	NaN	.	0	6302	GCA_013276675.1|VMLL01000071.1@region_1_6302@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_013276675.1|VMLL01000071.1@region_1_6302@tool_cenote	cenote	CDS	218	1009	GCA_013276675.1	VMLL01000071.1	GCA_013276675.1|VMLL01000071.1	GCA_013276675.1_VMLL01000071.1	GCA_013276675.1|VMLL01000071.1	GCA_013276675_1_85	GCA_013276675_1_85	219	1010	GCA_013276675_1_85_2	GCA_013276675_1_85_2	-	6302	.	6V8I_BM	Distal Tail Protein, gp58, Tail-Associated	MSAMSNLENLARAIGEDVKAIKEDSELKDREVKKRLDTLESRPKVHPETLVTKAELEEKGYLTSHQDLSTYAQKWELYNDIPIKARISALENRPSFDTLTPTQRDSLKGDNGHSLNASVRIEGSYKNGSTSRLNLFADVFYDGEAVTSGYTLDYYYRGFGYTNWRSLRNQTPDSAGKFGTWSASQRSGGWFEVRIEVNYRGLRASAFTHLDNVNDGEQGRSGVPGQNIVNQNGSQALNYWAGTQEQYDAITTKDPHTIYDIFK*	hhsuite_tools	hypothetical_protein	NaN	.	0	6302	GCA_013276675.1|VMLL01000071.1@region_1_6302@tool_cenote_CDS_0002	persistent	direct	high	791	0.999	GCA_013276675.1_01934
GCA_013276675.1|VMLL01000071.1@region_1_6302@tool_cenote	cenote	CDS	1006	1326	GCA_013276675.1	VMLL01000071.1	GCA_013276675.1|VMLL01000071.1	GCA_013276675.1_VMLL01000071.1	GCA_013276675.1|VMLL01000071.1	GCA_013276675_1_85	GCA_013276675_1_85	1007	1327	GCA_013276675_1_85_3	GCA_013276675_1_85_3	-	6302	.	PFAM:PF12789.6	tail-fiber-protein	MDTTKLTAFAQAVGEDNKKVNEELKTKVSTSDMNQAIAQAKSEVKAEILGEGTPENLDTLKEIAEKITSMGQDENSALLGKVTEVSGRVDQIANLDLVATYNAAKA*	phrogs_hmm	hypothetical_protein	NaN	.	0	6302	GCA_013276675.1|VMLL01000071.1@region_1_6302@tool_cenote_CDS_0003	persistent	direct	high	320	0.997	GCA_013276675.1_01935
GCA_013276675.1|VMLL01000071.1@region_1_6302@tool_cenote	cenote	CDS	1333	1809	GCA_013276675.1	VMLL01000071.1	GCA_013276675.1|VMLL01000071.1	GCA_013276675.1_VMLL01000071.1	GCA_013276675.1|VMLL01000071.1	GCA_013276675_1_85	GCA_013276675_1_85	1334	1810	GCA_013276675_1_85_4	GCA_013276675_1_85_4	-	6302	.	PFAM:PF14606.5	neck-protein	MVCNLNMTNLRQIDGGHLIKQGDLASTFGFALLDEDYQVISSLEGEQALISLTKEGYQWKKQVTVTGQGVSFHLDAILPIGSYRLEITAGGYVFPSDKSVHIKIVASDKELVTEEVHALKELDIAKEVEKQLAGRTVGESPVGQELPDLLFYYNLGKV*	phrogs_hmm	hypothetical_protein	NaN	.	0	6302	GCA_013276675.1|VMLL01000071.1@region_1_6302@tool_cenote_CDS_0004	persistent	direct	high	476	0.998	GCA_013276675.1_01936
GCA_013276675.1|VMLL01000071.1@region_1_6302@tool_cenote	cenote	CDS	1825	2103	GCA_013276675.1	VMLL01000071.1	GCA_013276675.1|VMLL01000071.1	GCA_013276675.1_VMLL01000071.1	GCA_013276675.1|VMLL01000071.1	GCA_013276675_1_85	GCA_013276675_1_85	1826	2104	GCA_013276675_1_85_5	GCA_013276675_1_85_5	-	6302	.	PFAM:PF04531.12	holin	MTEIEHLLIRFLFSLIPVVVLYFSMKDRATKQENRMTAIEKDIENLREFRMSANKRLDNHDEQNKAILVLAEQVKSLGEDVRELKTLIQSKQ*	phrogs_hmm	hypothetical_protein	NaN	.	0	6302	GCA_013276675.1|VMLL01000071.1@region_1_6302@tool_cenote_CDS_0005	persistent	direct	high	278	0.996	GCA_013276675.1_01937
GCA_013276675.1|VMLL01000071.1@region_1_6302@tool_cenote	cenote	CDS	2114	2266	GCA_013276675.1	VMLL01000071.1	GCA_013276675.1|VMLL01000071.1	GCA_013276675.1_VMLL01000071.1	GCA_013276675.1|VMLL01000071.1	GCA_013276675_1_85	GCA_013276675_1_85	2115	2267	GCA_013276675_1_85_6	GCA_013276675_1_85_6	-	6302	.	.	hypothetical protein	MSKITLDQAKIDMYINLLERGAVDFSWVHKRWKDRVRKELKRRGLSHLAN*	.	hypothetical_protein	NaN	.	0	6302	GCA_013276675.1|VMLL01000071.1@region_1_6302@tool_cenote_CDS_0006	persistent	direct	high	152	0.993	GCA_013276675.1_01938
GCA_013276675.1|VMLL01000071.1@region_1_6302@tool_cenote	cenote	CDS	2259	2792	GCA_013276675.1	VMLL01000071.1	GCA_013276675.1|VMLL01000071.1	GCA_013276675.1_VMLL01000071.1	GCA_013276675.1|VMLL01000071.1	GCA_013276675_1_85	GCA_013276675_1_85	2260	2793	GCA_013276675_1_85_7	GCA_013276675_1_85_7	-	6302	.	PF07104.11	Protein of unknown function (DUF1366)	MNYEVAINPYLKGGENVTVVAIKMENKGRYSYEQCELPGDHTQDSEDALIQAVLELVRTELDPTSAIVKNQEQLAKTTEALERANQLMDGMQKVNLQNAQDIEDILARLEELEAQGESDQEETDEDTPQVTDTENQAEEAQPTPAVEDKKESEKEDDISETTNQESPSEDNGGSSNE*	hhsuite_tools	hypothetical_protein	NaN	.	0	6302	GCA_013276675.1|VMLL01000071.1@region_1_6302@tool_cenote_CDS_0007	persistent	direct	high	533	0.998	GCA_013276675.1_01939
GCA_013276675.1|VMLL01000071.1@region_1_6302@tool_cenote	cenote	CDS	2789	2995	GCA_013276675.1	VMLL01000071.1	GCA_013276675.1|VMLL01000071.1	GCA_013276675.1_VMLL01000071.1	GCA_013276675.1|VMLL01000071.1	GCA_013276675_1_85	GCA_013276675_1_85	2790	2996	GCA_013276675_1_85_8	GCA_013276675_1_85_8	-	6302	.	.	hypothetical protein	MDNHTIDKLVAESLVDRLADIELNYAHLNVHHRLALAELQAFKAVLEYDPALKELFDETQAKMKGNKE*	.	hypothetical_protein	NaN	.	0	6302	GCA_013276675.1|VMLL01000071.1@region_1_6302@tool_cenote_CDS_0008	shell	direct	high	206	0.995	GCA_013276675.1_01940
GCA_013276675.1|VMLL01000071.1@region_1_6302@tool_cenote	cenote	CDS	2988	6299	GCA_013276675.1	VMLL01000071.1	GCA_013276675.1|VMLL01000071.1	GCA_013276675.1_VMLL01000071.1	GCA_013276675.1|VMLL01000071.1	GCA_013276675_1_85	GCA_013276675_1_85	2989	6300	GCA_013276675_1_85_9	GCA_013276675_1_85_9	-	6302	.	PDB:3GUD_A	Neck-appendage-protein	SSSLAQEAKRIGLDSVARLEAFKSQTRSAQTALSGDLNLLKQTVTNDISSKQRQLKTDISKQVQALGQIKNDLAGVRSSQARYEETTKGRLTALTNRMEGKANKSEVRQTAETLTSQIDRIQEESSTRISTMTSRFNQRADALDAGVRRLTEGLRTKADISSLNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVQAGSIRQEILNATKDKADKTLIRAEAGKLREEFSNMQVGGRNYYRDSEKIQQSRFGFVFDNLDPYLSKSDIGTTWTLSFDCKLDEVDGSFPFHMSHGGANGFGIEGRKEFTATREWQRFRLTGPVFFKEDAPSESKLQMTLFNSDLGYGGTIFIRRIKLEKGTLATDWSPALEDTNGLITQAKASFERTAQELRTDLSAVQAYVAQDGQRQKSLQRYTREESARQARAVREQISRDYVGKSSYQEDVEGIHRRIEGVKTSANREITSQIASYRQSADGTFRDISSQITTYKQDMTRNIANLSHQLAGKVETTDFQRVRESSQLYERILGNTENGIADKVARMAMTNQLFQVEVGKYSVSGPNLIKNSDFKNDTNKWVSTQNLGRLVKHSFYHNGQKDLMRLSNATKNKNFLSSHRFNLERNTDYVLNFRGFNNSALASYDVYILGRRAGESDGFTIFKKVVSSKKLSTSRCEDVSVTFNSGEMDNAYIRFENNGSSSGTADLYITEVDLYKGYKPRTWQPHPEDAVADANKKLEATQTKMTQLAGSWLVQNINSAGDLISGINLGANGHNRLSGKLTHITGETLIDRAVIKSAMVDKLKTANFESGSVTTAVLAAEAVTADKVKFDHAFIRKLIANDAFIGELTSKRIFATKIESVVNRSTFLEAYQGQIGGFTIGRFAQGRGRWISGVNQFSVGMGNGEGGSYNGENTAFWANWGYNWNSPGPNAWYVTTLGNMHCRNGASFHGRVDFSNSSRANFYGNTTFSRSPVFLNGIELGSKDVFGDGWNPKGGRNAVVWWNQVGSGSVKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIESKKHEEIGLIAQEAETIVPRIVSRDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMENRHG*	hallmark_hmm	common_virus	NaN	.	0	6302	GCA_013276675.1|VMLL01000071.1@region_1_6302@tool_cenote_CDS_0009	shell	direct	moderate	3216	0.971	GCA_013276675.1_01941
GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote	cenote	tRNA	15919	15989	GCA_013276675.1	VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675.1_VMLL01000041.1	GCA_013276675.1|VMLL01000041.1	GCA_013276675_1_52	GCA_013276675_1_52@C0	15920	15990	tRNA-Trp	tRNA-Trp	-	17749	.	tRNAscan-SE score: 59.0	Trp	NA	tRNAscan-SE	.	C0	17750.0	0	17750	GCA_013276675.1|VMLL01000041.1@region_1_17750@tool_cenote_tRNA_0001	.	.	.	.	.	.