core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	1	1370	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	1	1371	GCA_013276815_1_12_1	GCA_013276815_1_12_1	-	52670	.	PDB:3GUD_A	Neck-appendage-protein	MIYLTEGNRPLNEAYNDEIVHFGNNTYQLTFRFPTSDPKWELLKEETFLTADDLHGEQDFYIFEVEKQQGYIQVYANQVISLLNNYIVSSIEVDRVSGTRVLSAFAGSITRANPFSFFSDIDDRHTLNIKDKNAMEVLAKDKHSILGQWGGDMVRNGYNLRLLKNGGSENESLFMYKKNLSSYQHKTSTKSLKTRITFKTTVKGEGENAVDHDYMVVIDSPLLGNYSQIYEDVVEVNDQDVTDEASLIEYGKQYFRTSMCDMLEDSLEISVVGQSDVAVRMFDVVSIYHEWYGLDVRKKITKYTYSPMAKRLKSIGFGTFQSSLANAIGGIVNDAVLNESRNLHQIFEERLKKEIANADRAFDAEFTKREKAITDAIELAKARAEEVKQEVSDTINQRFNSFHDEPLRESRRKAEEALKQAGASSSLAQEAKRIGLDSVARLEAFKSQTRNAQTALS	hallmark_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0001	persistent	ambiguous	low	3	0.002	GCA_013276815.1_00140
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	1367	2065	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	1368	2066	GCA_013276815_1_12_2	GCA_013276815_1_12_2	-	52670	.	PDB:2X8K_A	Distal-Tail-Protein	MFYMIINGFNTSTIPHCVVTDFGQVEAAKPRVVEDANLYGANGSYRVLDGGYESYERTFSFYIPKLLDVSTIVEKFQPKDNVLEFSYQLGSVFYADFIGATYSPHGMHAWKLELKLSMQPFRYQKNLAPLIFTASGNVNNPGSVYSEPVIEIEGDGDISLTIGRTTMHLTIRRKVTIDCRHKKQNIYNADGAVQNTLRKRGGFFELAVGNNGLVFTGAVRKVTVRPNWRYIL*	hallmark_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0002	persistent	direct	high	698	0.999	GCA_013276815.1_00140
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	2065	6240	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	2066	6241	GCA_013276815_1_12_3	GCA_013276815_1_12_3	-	52670	.	PFAM:PF10145.8	minor-tail-protein	MASGTPLGQMYIELGLDVSKFSPTLTGAKNAVKYFQNNVRSLDSTLKGNEKNASLLQAKYKTLGQAIDSQRKVLDEMKKSFDKLEPGTAKFDKAAADIQRENAKLAVMEGQLRGVEKALQDVGRENSWSGKMDTLSENFAKGGEKLRAMGDAMKPVSAALLAGFTLSTKKAIDFESQMNTTKSLLADTIPTADELNSTTQKLGESSKNWAKQYGISTASINEGMQEIIKKGFDANQTIEAMPAILDAAKASGEDFNTVMNATTNILQQFGLSTQDTERVTNSLTFVANKTAAGFADMGAAMEYVGPVAKNVGMNLEETAAAVGLLSNNGIAGEKAGTALRGALTRLLKPSEQNANAMEKLGFSAEEFRSGAIKLPDILDRIKKNTEGMTDAQKSALIATAFGTEAQTAMNILVDQGGDALRNLANETKGATTYTKDLANELSKSSKNGVERFKSSLEVLQINIGQKLLPLLTPVIDKVNQFIDWLSKAPPAVQSLAVGIGGFLALGYPFLNFLGNGATALSILIKHAGKLEGLLKGGLGLAKLTERAGKLKGLLQGGLGLAKVGSEATVLAEGAGAAASSSSLLSGAIGALTNPIGLLVGGAALLAGGLVYLGHKKDEARIKAEEFGSQLSDTARKELRDFQSKVDDTSTAVANFGTHAGDAEKVSEAFRKLHEEVAAGAEKANQRMEELAKKLGFSDEEIAKMKVKNDQVVSNTDAMANQVSEIYKRHNGDASKFSQEEKEIVLNNQREMIKARIEMMELSGEQQKAALQALNGEIGSLNETQLKHTRDVLKKALDEENQLYKTSKDGLKQLLDAKRIDQETYNKKIQELETNHQQTMEALGTKYYQVMQNLDAKVKARTGQSWNYWEEAKKVLEEYGLSYEVIGQKAAEASQKMGDSHSILAKYTSDMSKETREANDAWSLLVGNIDENNNFVIKSNVKEVIGEATKSAEGWEQLQFIVKNANINSNARVTIAEALVESGKWSTMTLEEKQLIVQNQAGLQAIFDSENHLRIWNSMPAEVKQLLLENTDVMNKAEEASKALYNYDALTPKQKELLATDENFRKAVARSTDTLTTWNATTPFTKDLKLDPTNVLNNGQLSIDKIMAWNLSNPENKSLNATDNTSEAVASAKASVNSPKQEKPIDLLAKDQTAGVRNETSAAINAIKQHNPVDILAKNSTSSTVSEVKSVVNSIQDKTVTINAQDNASGVLAGIRTWITRVTGDFFTNVFASRHAHGTNYHPGGLAMVNDQRNSTYKELVTLPDGRSFIPEGRDVLLPLPKGAKVLRADKTKRLMREMGVPKYAAGVGIPSDAKFLREMEEAQAKIVVQTKGDTNSKDSDKVVSEIAILRASMEKILTAILEKPSDTYLDADKISMSVYQRQGAIYAREGM*	hallmark_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0003	shell	direct	high	4175	1.0	GCA_013276815.1_00141
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	6297	6527	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	6298	6528	GCA_013276815_1_12_4	GCA_013276815_1_12_4	-	52670	.	.	hypothetical protein	MSRKEKACRRYWFWFTIFILYLAFGLYCICTNFVDIFGMLLLSPFIFASLPLYAYLFLGMFIWAFMNMAMDDFYKE*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0004	shell	direct	high	230	0.996	GCA_013276815.1_00142
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	6776	7069	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	6777	7070	GCA_013276815_1_12_5	GCA_013276815_1_12_5	-	52670	.	.	hypothetical protein	MAKVQFTIKNDKGEDVLKKSKEITTRDYRDYLVMNESLTSDLSEVEKLDKQLGFIASLFDDVTVEQLLEYTDFAKVISIFTAIYAHLVGDVDPKEKS*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0005	shell	direct	high	293	0.997	GCA_013276815.1_00144
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	7115	7711	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	7116	7712	GCA_013276815_1_12_6	GCA_013276815_1_12_6	-	52670	.	PFAM:PF04630.11	major-tail-protein	MTVKGTALIGLKSVTIRVHDGQTPTVGQNLFTLEGKDNEGATQTARVTGLSSDPVKTYGSNVAYHVSNRGVGDVKVDMGLLDVPLALYTNALGYGDDDGIYYFGADTVAKNVSILIESNTADGEPVYYGFYKGQLSMDAIDFETLKDKANELATTSVNFTATASSDVATKGRYGAIVYGSDAEKLKKLKGQLNITAAG*	hallmark_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0006	shell	direct	high	596	0.998	GCA_013276815.1_00145
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	7728	8108	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	7729	8109	GCA_013276815_1_12_7	GCA_013276815_1_12_7	-	52670	.	PFAM:PF05657.10	tail-component	MIKDKLTELYDALEEDESLSGISIKSFERPESLGDDETSIVIIPVGPPMQTAHGSNTSLAKTFLYQINVESTNRVECKELQGRIEKIMEEQGFYQTEGGLEQWIPDIKRYVDVRTYRGMSALYEKY*	hallmark_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0007	shell	direct	high	380	0.997	GCA_013276815.1_00146
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	8108	8506	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	8109	8507	GCA_013276815_1_12_8	GCA_013276815_1_12_8	-	52670	.	PFAM:PF04883.11	tail-component	MSSGANLKGFDDILRNIEARLGEPVVRRKVNRALKETVEEFEPTFKRAMAVYADTGKTVGAVVHGNVTGTSSGVPMVKLGFKSPRWTLIHLNEFGYAKNGHPRGFGVMRRFFEASKPVFKSKVGMKLKQEFL*	hallmark_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0008	shell	direct	high	398	0.997	GCA_013276815.1_00147
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	8499	8888	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	8500	8889	GCA_013276815_1_12_9	GCA_013276815_1_12_9	-	52670	.	PDB:2KZ4_A	head-closure-knob	MKRSEGPSYRYKKPESQNGDLRTPLTFYTSKIKKGVDGRDVSYEKAFYTMGQTYSPSMKDVEIATGKAMKAKMTLKIRDPLTDYQPENRHFVEVGDIRLVGKKWQIIDVRPDFANRDFLIVLIGGGRDV*	hallmark_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0009	shell	direct	high	389	0.997	GCA_013276815.1_00148
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	8875	9063	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	8876	9064	GCA_013276815_1_12_10	GCA_013276815_1_12_10	-	52670	.	.	hypothetical protein	MIKVLKEFYDLKEGVLRQVGERFEATEERFAELKEHLPDYVELEKSSRSRSSKEVVSVNEEE*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0010	shell	direct	high	188	0.995	GCA_013276815.1_00149
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	9056	9346	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	9057	9347	GCA_013276815_1_12_11	GCA_013276815_1_12_11	-	52670	.	CDD:cd08054	Head-Tail-Connector-Protein	MEIEAKLHSLLDPFKERMRIFHSGEDANLSRMLESSQMVITRLVGSGNIHDHQIRELILERARYVYNDQVEFFYENFKADILALSLDKIEMEDSDD*	hallmark_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0011	shell	direct	high	290	0.997	GCA_013276815.1_00150
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	9360	10475	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	9361	10476	GCA_013276815_1_12_12	GCA_013276815_1_12_12	-	52670	.	PFAM:PF06673.10	Major-Capsid-protein	MMKLGNEFTTARQNFMNAVETGAPMEEQNKLYNEMIEALTDKLQDDAREAARKEIATMNPYDAQLTAEAREFFNNIEKLPPKGIEKLFPQETIDRIFEDMVAARPLLQHIGLRNAGIRLKFLKSSRTGQAVWGKINAEIQGQLKQEFAEEEAIQSKLTAFVVIPKDSEKFGPAWLQSYVSIQITEAFAAALEAGYLNGDGDNKPIGLSRTLTGTAESEKVTYAEKQAQKKPLTFADSATVVKELTEVYKYHSTKADNTTPVAVEGNLVMVVNPVDAWDVKKQYTSLNAQGVYVTAMPYNLILVESVAQASGKVTTFVKGRYDAFVGGGIEFGRFTETYALEDLNLYTAKQFAYGKAHDEKTAAVWTLNIGK*	hallmark_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0012	shell	direct	high	1115	0.999	GCA_013276815.1_00151
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	10494	11216	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	10495	11217	GCA_013276815_1_12_13	GCA_013276815_1_12_13	-	52670	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MTIIQIKGAIVSNDDRWFYDWLDMDATAPKDIVLPTTGEDVEVHINSGGGDVYAGSEIYTALRAYQGHVTVKIVGIAASAASVIAMAGDQVEISPTAQIMIHNVSAGVRGDHKALLHEAGVLEGFNKSIAYAYIDKTGKALDDLLDLMEGETWFDARSAVNHGFADKVMFESQEAPVLVASQTPVIPRDFIEKIRSAMTPDVELLADLVRDRLNNSLPIPEDKKKEDKTAEPVGLGRFPF*	common_virus_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0013	shell	direct	high	722	0.999	GCA_013276815.1_00152
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	11197	12345	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	11198	12346	GCA_013276815_1_12_14	GCA_013276815_1_12_14	-	52670	.	PFAM:PF04860.11	Portal-protein	MGFLNLFKRDAPDVGFDFEELERMLGCLQLKSLAIDKSAEFVARIFAKSEFRYMVENHHVTSDWDYILNVRPNKNESASEFWQKVIYRLLTKNEVLIVLSDDKQLLVADAFTRRRYALYDDTFEMVSVGDYTFQRKFAMSDVIFLQYNNNRLQEYVSDLFSDYEKLHTRLVEALARNNQIRGVLATKANGTFDEDKRKKLQRYADNLFKSFTSKTVAIVPTMDGVEYSELTNTVGTTNLSVEELKKLRRQFDDEVADILGLPTALMHGDMADLSNSQKMFNSYCYESLVKKVGDALNHAMVSSAGYANQKKFVIFGEGGLDKFALAENIDKLISSGAMTRNEVRLELGLEAVPGGDSFLITKNYQGENEIEKGGNEDDNHSD*	hallmark_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0014	shell	direct	high	1148	0.999	GCA_013276815.1_00153
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	12401	14041	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	12402	14042	GCA_013276815_1_12_15	GCA_013276815_1_12_15	-	52670	.	PFAM:PF03354.14	Large-Terminase	MISHPLVDDYIKMAENGEVVVNKERKLLFKIIKEKIYPRDDLYFDNDLIDKFIRFAEKNFFPLAKYQLFLTPFIFLFRKVDEEPHFDEYLYTLARGGGKNGFMSARSSFFISPIYPIRDYDVTITANSEKQGKVSFEEVYETIQRRGLEDHFYLTKMSITGRANNSVFSFRTNNPKTMDSARDGCLEFDEIHQFENDKAVKVQRSGLGKIAHVRTFYNGTNGYVREGFYDKLIEKSMQILNGEVDDFRLFPFICKLDSADEVDDMKNWPKANPMLDESTPYAKRLLARTKADYDDLELEPSGRQEFMTKRMNIPEADLEKDVTTRERLLACLRSPGIDLLGKSCVAGFDYASIRDFASVGLLFKNGDEFIWKQHSFARKAFLKAFKLKAPIQEWADRGLFTIVDGPSIDPRLLVEKLNEWSKFYQIELVCADGFRMDLLKPLLEEAGFEYEFLRNPGAIQSKVAPIIEDGFANERFIFENDNSMIWYTDNTYVKEDKDGNKRFLKKEPVRRKTDGFHALIAALYKRELVHESNVGEFLDMLEDWEF*	hallmark_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0015	shell	direct	high	1640	0.999	GCA_013276815.1_00154
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	14038	14376	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	14039	14377	GCA_013276815_1_12_16	GCA_013276815_1_12_16	-	52670	.	PFAM:PF05119.11	Small-Terminase	MEEYSEKNIKELENQLLSKIGYFSPRKKDAIQYEKVNRYLYLVRLLYELKAKLHEDGLVITVHNGQQRFQKANSLIKEINTTSNQLLAIERSFDFDVENSPVEKATSGSDLL*	hallmark_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0016	shell	direct	high	338	0.997	GCA_013276815.1_00155
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	14495	14791	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	14496	14792	GCA_013276815_1_12_17	GCA_013276815_1_12_17	-	52670	.	PDB:5H0M_A	HNH-endonuclease	MIEVSTREERNQFYNSSEWRTIRRQALKRDHYECVWCRDEGKVTTTNLEVDHIKELEFYPEFALDIDNLRTLCKACHNKRHDRFDKNDRNFRKDEWWG*	common_virus_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0017	.	unmatched_CDS	none	0	0	.
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	15005	15547	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	15006	15548	GCA_013276815_1_12_18	GCA_013276815_1_12_18	-	52670	.	CDD:cd01192	site-specific-tyrosine-recombinase	MNIVEPIRDKDDIQAMKDYLREWNERNYILFLFGINSGLRVGDILKIRVKDVQGWYIKLKEQKTGKKKKIKMTKTLKREVREYIQNKPHHHFLFQSRVGKNKPLDRRTVDWILKVAASECGIENIGTHSMRKTFGYHYYKKTKDIAMLMSLFNHSSPAITLRYIGIRQDQQDKAMSNFGL*	common_virus_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0018	shell	direct	high	542	0.998	GCA_013276815.1_00156
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	15847	16275	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	15848	16276	GCA_013276815_1_12_19	GCA_013276815_1_12_19	-	52670	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MQIELLDIIDEKKTRKEAIKVLKKYSRLRRIAGEEYAPKITISYSLEPKSSSGQTSKQVESMVLRRVSAQQDLELIAKAINNLSDMEYTRILIERYCRKKRREDYSIYSELGYSSSEYYRILNKALLEFAESYQASNLLVYK*	mmseqs_cdd	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0019	persistent	direct	high	428	0.998	GCA_013276815.1_00157
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	16346	16576	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	16347	16577	GCA_013276815_1_12_20	GCA_013276815_1_12_20	-	52670	.	PDB:2FJR_A	Repressor-protein-CI	MKDKLNPRQASRFAFLLKQKRKERKLSQEKLAAKLGYSRYLIAKWEKEESVPNIYNVEDICTYFAFPADIILGSRA*	common_virus_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0020	shell	direct	high	230	0.996	GCA_013276815.1_00158
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	16566	16745	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	16567	16746	GCA_013276815_1_12_21	GCA_013276815_1_12_21	-	52670	.	PFAM:PF04936.11	host-nuclease-inhibitor	MSEYALYDGDTFITMGTLAEISKETGIAERMLKYYTFASTQKRHPNGRAVIKIEVDDEG*	phrogs_hmm	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0021	shell	direct	high	179	0.994	GCA_013276815.1_00159
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	16738	16851	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	16739	16852	GCA_013276815_1_12_22	GCA_013276815_1_12_22	-	52670	.	PFAM:PF11753.7	kinase	MTDNINKPSHYQGANGLEDLKKARKNLDWLIEEMEHE*	phrogs_hmm	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0022	shell	direct	high	113	0.991	GCA_013276815.1_00160
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	16853	17377	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	16854	17378	GCA_013276815_1_12_23	GCA_013276815_1_12_23	-	52670	.	PFAM:PF13921.5	transcriptional-regulator,-D5-like	MAGRRWTEDEVDYLEWYVLSREEHDLTQACKFLDRSYNAVRSKLAKLQKYNPNLQFKPKWSDADDSYILKYYQRFSYKTLARILGRSEKAIRDRIRKLGKRKILDLTIFHKDVVSLANQGIAVKDIAQKLGLHYNQVYYCLNKHQIPYKKREFRNQSNNLAWRNLNDMIFMRRT*	phrogs_hmm	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0023	shell	direct	high	524	0.998	GCA_013276815.1_00161
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	17364	17543	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	17365	17544	GCA_013276815_1_12_24	GCA_013276815_1_12_24	-	52670	.	.	hypothetical protein	MPDVEWIMENCHMMRDNGIWAGEKQISYASPDGQYTYYVNKRKDGTYYLHGAYKHYGRT*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0024	shell	direct	high	179	0.994	GCA_013276815.1_00162
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	17536	17943	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	17537	17944	GCA_013276815_1_12_25	GCA_013276815_1_12_25	-	52670	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MIPKFRAWDRLRKEMNYKVMVGNCDTDDENWTCPIIWIEEKKDWLHFDDYECIMQSTGLKDKNGKEIFEGDILEIQDEGEVLGNAKLTWDNEQAVFMIEAISVDDIAPFHEILSDESYSYRVVGNIYENKELLDA*	mmseqs_cdd	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0025	shell	direct	high	407	0.998	GCA_013276815.1_00163
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	17940	18200	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	17941	18201	GCA_013276815_1_12_26	GCA_013276815_1_12_26	-	52670	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MKRFIAIWILLSAGLNIWQMDRIAELEKKKPMVIYKADNAGAEIFGKVVEKGRHGKLYTLTIRDYGVFVVTKDVYEKVKVGDEVML*	mmseqs_cdd	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0026	persistent	direct	high	260	0.996	GCA_013276815.1_00164
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	18197	18358	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	18198	18359	GCA_013276815_1_12_27	GCA_013276815_1_12_27	-	52670	.	.	hypothetical protein	MSLTLNSTIRDLVLAIGEVIVGSDGKTTTAILEIPDQSFYLEIELKLKEEVID*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0027	shell	direct	high	161	0.994	GCA_013276815.1_00165
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	18358	18663	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	18359	18664	GCA_013276815_1_12_28	GCA_013276815_1_12_28	-	52670	.	.	hypothetical protein	MKYKVTEYHSDFQEEQTGTCELCFGTAWVENGSITVEDENGTETEIYLTVWDWGDYDTIYIDNVVNFSAWLQEREVDPIVEETERWSWLHELVEKYNEEVE*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0028	shell	direct	high	305	0.997	GCA_013276815.1_00166
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	18653	18844	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	18654	18845	GCA_013276815_1_12_29	GCA_013276815_1_12_29	-	52670	.	.	hypothetical protein	MNYDKQVVIEGLKRTIEQNEEKIIEYSKPCDARKRRIRALERDLLKKKNKELRKKVEELEDEI*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0029	shell	direct	high	191	0.995	GCA_013276815.1_00167
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	18831	18998	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	18832	18999	GCA_013276815_1_12_30	GCA_013276815_1_12_30	-	52670	.	.	hypothetical protein	MIGVTYQEIHLFVEFLKKQYGQGRPDYIEALNDLDGMVEVSYREAIERFLDDELR*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0030	persistent	direct	high	167	0.994	GCA_013276815.1_00168
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	19014	19409	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	19015	19410	GCA_013276815_1_12_31	GCA_013276815_1_12_31	-	52670	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MINNVTLVGRLTKDPELKYTPSNVAVATFTLAVNRNFKGANGEREADFINCMMWRKQAELFAEWCKKGNLVGVTGRIQTRNYENQEGRRVYLTEVVADGFERLEKRDDTANRSNIEEQMPGYALEEDDFPF*	common_virus_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0031	persistent	direct	high	395	0.997	GCA_013276815.1_00169
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	19402	19503	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	19403	19504	GCA_013276815_1_12_32	GCA_013276815_1_12_32	-	52670	.	PFAM:PF00436.24	single-strand-DNA-binding-protein	MIEFIKEFGITFLCFFIGYSVVECATGKEKKDD*	phrogs_hmm	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0032	shell	direct	high	101	0.99	GCA_013276815.1_00170
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	19496	19723	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	19497	19724	GCA_013276815_1_12_33	GCA_013276815_1_12_33	-	52670	.	.	hypothetical protein	MLNLYFVYNGHCKFYLGTFDNVDDLIEQMEDHQWAFSAITQPRFQKHIGQRTTRFDYGTKDCYYLATFSGGEEND*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0033	shell	direct	high	227	0.996	GCA_013276815.1_00171
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	19733	20194	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	19734	20195	GCA_013276815_1_12_34	GCA_013276815_1_12_34	-	52670	.	PFAM:PF02390.16	DNA-methyltransferase	MKDIRILDACCGSRMFWFNKKQPHTTYMDRREEEFEIHKKKINVKPDIVADFRDMPFDDETFNLVVFDPPHLLWAGQKSFMRAQYGQLDLLTWRLDLQQGFEECFRVLKTGGTLIFKWSDAQVNVKEILELVPHQPLFGQQRGTTHWMAFMKF*	phrogs_hmm	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0034	shell	direct	high	461	0.998	GCA_013276815.1_00172
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	20194	20388	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	20195	20389	GCA_013276815_1_12_35	GCA_013276815_1_12_35	-	52670	.	.	hypothetical protein	MFILRHGTREDKPFLRSVVIGVTGLDISYSEEKKAMRFVSRGVAVQVGKALRGSFGNFYPVEVE*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0035	persistent	direct	high	194	0.995	GCA_013276815.1_00173
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	20403	21173	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	20404	21174	GCA_013276815_1_12_36	GCA_013276815_1_12_36	-	52670	.	PDB:4M4W_K	Replicative-helicase	MVDNVFEEIALSYHRNTEQQDEFCEKHNIPLIKILRTESVVCRMCESERIHEENQARVNELADAENERERKYYLEKFSLYDEVLKNATLDNFETPTEKEAEKLAFAKRICREWSEGARNNIVLQGEAGTGKSHLAFAMVKALSEYTKEIAIFINVTDLLMKIKADFSQEEFLVNKIASAKFLVLDDLGMEKDSEWSFTILYNILNKRSNTIITTNLTSADIQKRYGRPFMSRLMKGVDKDHLMVFNDLTNKRKHYF*	rep_hall_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0036	persistent	direct	high	770	0.999	GCA_013276815.1_00174
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	21167	21325	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	21168	21326	GCA_013276815_1_12_37	GCA_013276815_1_12_37	-	52670	.	.	hypothetical protein	MGILELIEQFEIDYYPLSYEKKTLLADQPIHQVVACLSEMASWHECGGRLSW*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0037	persistent	direct	high	158	0.994	GCA_013276815.1_00175
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	21313	22131	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	21314	22132	GCA_013276815_1_12_38	GCA_013276815_1_12_38	-	52670	.	PFAM:PF09681.9	replisome-organiser	MLGMSEIKWIKITTDIFDDEKICLIDALPDPDAILVIWFKILTLAGKHNSNGLLMMTDKVHYTDEMLATIFRRPLNTVRMAIGVFEQFGMIEIIDGIISLPNWEKHQNVDGMEKIKEQTRNRVAKYRKKQKNLALGNVTGNVTVTDGNALEEDKDKNKNRLDKDKNKKRITTTTSSGGQENILELFQSEFRRLLSGFEIEEINHLLNENDVDLVKEALKTAINSGKPNIKYIGGILRNWQMNNVTTVEQVRQSEKKNKDKKEEQEAKDEWGY*	rep_hall_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0038	persistent	direct	high	818	0.999	GCA_013276815.1_00176
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	22115	22411	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	22116	22412	GCA_013276815_1_12_39	GCA_013276815_1_12_39	-	52670	.	.	hypothetical protein	MEELIESLDNLIMIVKELEGRESTSRHFITTWENDYKNLLLVKEYLTDYKKLAKDYRDVELKNKLLKIEKMELEGRYIYEDMRMKYRANRRKWGARYV*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0039	shell	direct	high	296	0.997	GCA_013276815.1_00177
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	22427	22747	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	22428	22748	GCA_013276815_1_12_40	GCA_013276815_1_12_40	-	52670	.	.	hypothetical protein	MFEPPILDQLMGVGALLIGFAGLCRHIKLQEERKEKERREEQEFASMITQGYNQAYERGREDKWQEIRKNIRREFKGFTYDNEPPVGLRPEPLALPEPKQSAIRLL*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0040	shell	direct	high	320	0.997	GCA_013276815.1_00178
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	22760	23050	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	22761	23051	GCA_013276815_1_12_41	GCA_013276815_1_12_41	-	52670	.	.	hypothetical protein	MEGITLQLRLDGESAELFTNQLLAFAEKQVKEQLENDRMPINQQALMKKFGFTHAYIKKLERKGLRFRKQGKDIMYDVNDVYEILELEKEVRKLRA*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0041	persistent	direct	high	290	0.997	GCA_013276815.1_00179
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	23155	23298	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	23156	23299	GCA_013276815_1_12_42	GCA_013276815_1_12_42	-	52670	.	.	hypothetical protein	MEDKIIELADYFISESTTYREAKIACEKLFRQVSHEIELRALESKTV*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0042	persistent	direct	high	143	0.993	GCA_013276815.1_00180
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	23415	23639	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	23416	23640	GCA_013276815_1_12_43	GCA_013276815_1_12_43	+	52670	.	.	hypothetical protein	MSKLSHKPNHVVKKLTWENLDNILLSYFSESTTDKPSAVIQLSDFEMSKAEIIEEATAQGYQVIDNSDGYLKFL*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0043	shell	direct	high	224	0.996	GCA_013276815.1_00181
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	23602	23757	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	23603	23758	GCA_013276815_1_12_44	GCA_013276815_1_12_44	-	52670	.	.	hypothetical protein	MRPRRYPYSGKRKKQSDRQIAKLKRDIDVNRTNISSLKFVIETLSNHQNYR*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0044	shell	ambiguous	low	39	0.25	GCA_013276815.1_00181
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	23771	24484	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	23772	24485	GCA_013276815_1_12_45	GCA_013276815_1_12_45	-	52670	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MNEIFNFHGQEVRTLTIDDEPWFVGKDVADILGYAKPLDAISRHVDEDDSVKYGLTDNLGRTQNTIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIREDLDEDAFIALFTGQKKLREQQTTMLEDIDYLKSEQPIHPSYAQSLLKKRKARVVACLGGIDSPAYADKIFAQSVFRQAEIDFKDHFNISRYDLLPKKHADAALAYWMTWEPSTNTKMKIMELNAFSQA*	common_virus_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0045	shell	direct	high	713	0.999	GCA_013276815.1_00182
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	24532	24792	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	24533	24793	GCA_013276815_1_12_46	GCA_013276815_1_12_46	-	52670	.	.	hypothetical protein	MSSLSKNLLPIQNLEIKIDSDSSIPRVILNGIDFQAEDIGLQGIKIIWETKTDEVPETLIQVDYITNREAPHIVSVKQSFQNTLLK*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0046	shell	direct	high	260	0.996	GCA_013276815.1_00183
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	24832	24948	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	24833	24949	GCA_013276815_1_12_47	GCA_013276815_1_12_47	-	52670	.	.	hypothetical protein	MANKGFKNSYIDRKKLSSSLKTLMTQRKELEEFLKDLL*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0047	cloud	direct	high	116	0.991	GCA_013276815.1_00184
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	25012	25542	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	25013	25543	GCA_013276815_1_12_48	GCA_013276815_1_12_48	+	52670	.	.	hypothetical protein	MPQITNDNVQIWTLYITVIIAVIGFVFNTISLWQTKKATEDMAKPYINVYVDVYAVKNQQRTFVFKNFGQTPAYIDNIQIDGELDPLNSVHRFNSLIGNMIAPGQKFTSSIDPDYKGRITLTITYSDSKKHKYIDKFVLDATLASAMFYTVNESNKSDSPATAIRQSTMALLRDLR*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0048	shell	direct	high	530	0.998	GCA_013276815.1_00185
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	25568	25708	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	25569	25709	GCA_013276815_1_12_49	GCA_013276815_1_12_49	-	52670	.	.	hypothetical protein	MNANVNVFYELTCKDLNEAIDAKNKIIANTLDDETVEIKIEFLRDV*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0049	shell	direct	high	140	0.993	GCA_013276815.1_00186
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	25741	25932	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	25742	25933	GCA_013276815_1_12_50	GCA_013276815_1_12_50	-	52670	.	.	hypothetical protein	MEVFLYVVIVSAITSFLVTVMLLRGYSNRLTEMLENFFDNELQARKEIQKLTLDTMDRIANKK*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0050	shell	direct	high	191	0.995	GCA_013276815.1_00187
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	25942	26139	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	25943	26140	GCA_013276815_1_12_51	GCA_013276815_1_12_51	-	52670	.	.	hypothetical protein	MNNAAQKVTRIDKDAWEIATELANEYGVSICHIISESVRYCAENAEFKEMDVVVKRLVVGSKVLE*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0051	persistent	direct	high	197	0.995	GCA_013276815.1_00188
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	26151	26336	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	26152	26337	GCA_013276815_1_12_52	GCA_013276815_1_12_52	-	52670	.	PFAM:PF13744.5	transcriptional-repressor	MYGAKMRELRTAQKLGLRELAKRTLIDYTTLSRIENDLKAVTLSQAVVIAKALGCRVEDML*	phrogs_hmm	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0052	persistent	direct	moderate	171	0.919	GCA_013276815.1_00189
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	26453	26662	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	26454	26663	GCA_013276815_1_12_53	GCA_013276815_1_12_53	-	52670	.	PFAM:PF13744.5	transcriptional-repressor	MQILLYKLRKEKNISQKEMADVIGKSENSYRNKELGKQDFKLSEMFKIAHYFGKELGDIFTPQTSRKVK*	phrogs_hmm	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0053	shell	direct	high	209	0.995	GCA_013276815.1_00190
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	26843	26968	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	26844	26969	GCA_013276815_1_12_54	GCA_013276815_1_12_54	-	52670	.	.	hypothetical protein	MRRRKKPEKATKKEPWLDGPKALVISTVITASVELIKHFLK*	.	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0054	shell	direct	high	125	0.992	GCA_013276815.1_00191
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	27134	27958	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	27135	27959	GCA_013276815_1_12_55	GCA_013276815_1_12_55	+	52670	.	PDB:2FJR_A	Repressor-protein-CI	MTDKELAIYIGTKIKEYRLQRGLTQKELATLVDMGDTTIANYEKGFRTPKKNTLFKISSALSVTIDDLFPPIRKADTPTASPDLLTQQITDKVVQLTPDNKKIVLRTSEELLERQKANGEMYTEQNEEETKVNEVSEVISLYQVEVVSETAAASGFNYGFGYDDTDRETIEVDEQPPRHDIATKVSGDSMQPDYQDGDILYLVDKGLTTYNGDLAVIAYGDRSYFKKIYTENGRLRLVSLNDKYEDIILDFPPAEDTHIKIYAVVGVYRGGATY*	common_virus_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0055	shell	direct	high	824	0.999	GCA_013276815.1_00192
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	27955	28845	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	27956	28846	GCA_013276815_1_12_56	GCA_013276815_1_12_56	+	52670	.	PFAM:PF07751.10	abortive-infection-resistance-protein	MSRQPKWNNRKLINHLASKDVSFNNISIGQAITFLDKNNYYYKLAAFRKNFKKKDGKYVDLDFSYLQDLASLDMKIRAILLNIAIDVEHFIKVELSRQINNNPQEDGYSILTEFKNSQYNKYYEFTKKKFRESRYQNAMFNKRKHDYPYWALLEHMDYGCLIKFVTFYYQKHGCKSLKKASELGDGARHIRNACAHNSVLLLNVFEKDDKLSNVNAVITTFAKQVDVIKYKNYKKVNDLISLLVLAKAYCSPAVLDYQKQAIDNFIVRCQRNQSAYAKNVELTKMMVVFKKIVDIL*	phrogs_hmm	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0056	shell	direct	high	890	0.999	GCA_013276815.1_00193
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	29133	29876	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	29134	29877	GCA_013276815_1_12_57	GCA_013276815_1_12_57	+	52670	.	PFAM:PF02452.16	antitoxin-mazE-like	MNKLEKNNLDKLTVSTDKMKQLTVENPNHFKTSRLGQSMTNYSNQLEREIQGKRRRNRVFPYGTLVYVDFGINFGSEFSAPHYAITLTKEDKKNRNTITVIPLTSKPGYDNLPLEFNLAEGLGLLTTQLIKAAEDKVENELVAHFGEYDDFDELIAKLDKEGRLDEKERAINLVQKLTDNVSLAGQRLEKYVSDLDKTTYAKLDSITTIDKVKIFKKINPLDGIGVAKILEPQMKILSDEIKARYLI*	phrogs_hmm	hypothetical_protein	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0057	shell	direct	high	743	0.999	GCA_013276815.1_00194
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	30173	31318	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	30174	31319	GCA_013276815_1_12_58	GCA_013276815_1_12_58	+	52670	.	PDB:1XO0_A	Recombinase	MIKKYITKKGETRYLFQTYLGIDPATGKEKRTTRRGFKTIKEAKAAERDLLLDVEENVFSNNEDFQNPTFAEVAELWLDSYKSTVKPTTYQNVKKKLRIIIDSYFTDMKIQQISVAYCQKVAIQLSNRYILYANYYSVISRIFKYAVSLDIIKLNPLDKIIKPKNRPLKGKENHYTKQELTEFLKVYKVNCKPVDYTFFHLLAFSGLRTGESIGLMWSDVDFENKLLSISRTAVVIGKKQTVQDPKTKRSKRVITLDDETLNVLKLWKRQQIKEYFQAGVPYKRESNYIFTNSFGGWISPSAVKERLRRFFCEHKDVKKITPHGFRHTHASLLFEAGITAKIISDRLGHNNVQTTLDMYTHINDNQRFEVVDQLMDFIRSS*	common_virus_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0058	persistent	direct	high	1145	0.999	GCA_013276815.1_00195
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	31452	32021	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	31453	32022	GCA_013276815_1_12_59	GCA_013276815_1_12_59	+	52670	.	COG4116	Predicted triphosphatase or cyclase YjbK, contains CYTH domain [General function prediction only]. 	MKHLEIELKTLLKKDEYDRLKDQFTGVTPVLQKNYYIDTPDFELREKKVAMRIRTFEDWAELTLKVPQSVGNMEYNQKLQLKDAENYLSKKEFPQGIVLDELAKHGSQTSEWQVLGCLTTLRYEMQTAIGLMALDESQYFDMTDYELELEVENHEQGKQDFQQFLEENQISYQKAPSKLVRFVKSMKNS*	mmseqs_cdd	nonviral_gene	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0059	persistent	direct	high	569	0.998	GCA_013276815.1_00196
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	32134	33093	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	32135	33094	GCA_013276815_1_12_60	GCA_013276815_1_12_60	+	52670	.	PDB:5IV5_BD	Baseplate-wedge-protein	MSDRKNMKLFALNSNQEIAQKIAEAVGVPLGKLSSRQFSDGEIQVNIEESVRGYDVYIIQSTSFPVNNHLMELLIMVDACVRASAHSINVVLPYFGYARQDRIACPREPLTAKLVANMLVKAGVDRILTLDLHAVQVQGFFDIPVDNLFTVPLFAKHYCDKGLLGSDVVVVSPKNSGVKRARSLAEYLDAPIAIIDYPQDDATRNEGYIIGDVEGKKAILIDDILNTGRTFSEAAKIVEREGATEIYAVSSHGLFVEGAAELLDNTNIKEILVTDSVATKEKTPKNVCYITASELIGDAIVRIHERKPVSPLFAYNKKK*	common_virus_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0060	persistent	direct	high	959	0.999	GCA_013276815.1_00197
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	33103	34218	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	33104	34219	GCA_013276815_1_12_61	GCA_013276815_1_12_61	+	52670	.	COG1104	Cysteine sulfinate desulfinase/cysteine desulfurase or related enzyme [Amino acid transport and metabolism]. 	MIYLDNAATTPMSAVAISAMTEVMQETYGNPSSIHAHGRQAGKLLREARQELAQLLGTKPQHIFFTSGGTEGNNTAIIGYCLRHQEQGKHIITTAIEHHAVLETIDYLVQHFGFEATIIQPENQEITAQQIQEALRDDTILVSTMFANNETGNLLPIAEIGQILKQHPAAYHVDAVQAIGKIPIHPEELGIDFLTASAHKFHGPKGIGFLYASSMDFDSYLHGGDQEQKKRAGTENLAAIVGMVAALKEDLEKQEEHFQHVQNLETAFLAELEGIQYYVNRGQHHLPYVLNIGFPDQKNDLLLLRLDLAGISISTGSACTAGIVQSSHVLEAMYGANSERLKESVRISLSPQNTVEDLQTLAKTLKEIIGG*	mmseqs_cdd	nonviral_gene	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0061	persistent	direct	high	1115	0.999	GCA_013276815.1_00198
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	34223	34570	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	34224	34571	GCA_013276815_1_12_62	GCA_013276815_1_12_62	+	52670	.	pfam08866	Putative amino acid metabolism. Solution of the structure of the Lactobacillus plantarum protein from this family has indicated a potential new fold with remote similarities to TBP-like (TATA-binding protein) structures. This similarity, in combination with genomic context analysis, leads us to propose an involvement in amino-acid metabolism. The potentially novel fold is an alpha + beta fold comprising two beta sheets packed against a single helix. The enzyme is present in the cytosol.	MAFEKTIQLKNCRYDYTLSPSVKKFTLKDNTFFETKVGNYELTRLLEKVPNSGEGFQLKIIINKELTGAKINITDKFGLRLVDIFKSEDHHIHQEKFYFLMDSLVERGVFTKSER*	mmseqs_cdd	nonviral_gene	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0062	persistent	direct	high	347	0.997	GCA_013276815.1_00199
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	34578	34793	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	34579	34794	GCA_013276815_1_12_63	GCA_013276815_1_12_63	+	52670	.	4IAJ_B	Conserved domain protein	MFELTYKDSYHVERTLKYEDYEALMLALSGCVTLPDTLYVTSLTFNSQKIYQGLVGDLYRFLSHTDFLHQN*	hhsuite_tools	nonviral_gene	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0063	persistent	direct	high	215	0.995	GCA_013276815.1_00200
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	34876	35517	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	34877	35518	GCA_013276815_1_12_64	GCA_013276815_1_12_64	+	52670	.	PRK05472	redox-sensing transcriptional repressor Rex; Provisional	MKDKQFAIPKATAKRLSLYYRIFKRFHAEKIERANSKQIAEAIGIDSATVRRDFSYFGELGRRGFGYDVKKLMTFFADLLNDNSITNVMLVGIGNMGHALLHYRFHERNKMKIIMAFDLDDHPEVGTQTPDGIPIYGISQIKDKIKDADVKTAILTVPSVKSQEVANLLVDAGVKGILSFSPVHLHLPKDVVVQYVDLTSELQTLLYFMRKED*	mmseqs_cdd	nonviral_gene	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0064	persistent	direct	high	641	0.998	GCA_013276815.1_00201
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	35535	36224	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	35536	36225	GCA_013276815_1_12_65	GCA_013276815_1_12_65	+	52670	.	pfam07722	Peptidase C26. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C-terminus.	MKKPVIGITGNEKTHPDDDIMMSYAAKGFVEGVKDAGGIPIILPIGDQEMACHYISMIDKLILTGGQNVDPKFYGEPKTIDSDDYHLQRDIFELALIKEAIKQKKPIFSVCRGTQLFNVAMGGTLYQDIEDHWQNCSAEYTTQRLVTEPDTVLREIYGEISHINSFHHQSIKDLAPNLKIAAHDPKDGIIEAVMSTDDVAFLGVQWHPEFLFENRPKDKNLFDYVVNEL*	mmseqs_cdd	nonviral_gene	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0065	persistent	direct	high	689	0.999	GCA_013276815.1_00202
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	36221	36901	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	36222	36902	GCA_013276815_1_12_66	GCA_013276815_1_12_66	-	52670	.	PRK00024	DNA repair protein RadC. 	MYSISFQEDSLLPRERLAKEGVEALSNQELLAILLRTGTRQASVFEIAQKVLSNLSSLTDLKKMTLQELQSLSGIGRVKAIELQAMIELGHRIHKYETLEMESILSSQKLAKKMQQELGDKKQEHLVALYLNTQNQIIHQQTIFIGSATRSIAEPREILHYAIKHMATSLILVHNHPSGAVAPSRNDDHVTKIVKEACDLMGIVLLDHLIVSQSSYFSYREKTDLI*	mmseqs_cdd	nonviral_gene	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0066	persistent	direct	high	680	0.999	GCA_013276815.1_00203
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	36944	39235	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	36945	39236	GCA_013276815_1_12_67	GCA_013276815_1_12_67	-	52670	.	PDB:1UAA_B	Replicase	MNALLNGMNDRQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKLVNPWNILAITFTNKAAREMKERAYSLNPATQDCLIATFHSMCVRILRRDADHIGYNRNFTIVDPGEQRTLMKRILKQLNLDPKKWNERTILGTISNAKNDLIDDVAYAAQAGDMYTQIVSQCYTAYQKELRQSESVDFDDLIMLTLRLFDQNPDVLTYYQQKFQYIHVDEYQDTNHAQYQLVKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPQAKVVLLEENYRSTKTILQAANEVIKNNKNRRPKNLWTQNADGEQIVYYRANDELDEAVFVAKTIDELGRSQNFLHKDFAVLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDIIAYLNLIANLSDNISFERIINEPKRGIGPGTVEKIRDFANVQNMSMLDSSANIMLSGIKGKAAQSIWDFANMILDLREQLDQLSITELVEAVLEKTGYVDILNAQATLESKARVENIEEFLSVTKNFDDISDGPEEETGLDKLSRFLNDLALIADTDSGSQETSEVTLMTLHAAKGLEFPVVFLIGMEENVFPLSRAAEDPDELEEERRLAYVGITRAEKILYLTNANSRLLFGRTNYNRPTRFINEISSDLLEYQGLARPANTSFKASYSSGGLAFGQGMSLAQALQDRKRSAAPKSIQSSGLPFGQFTAGAKSASSEAIWSIGDIALHKKWGEGTVLEVSGSGATQELKINFPEVGLKKLLASVAPIEKKI*	common_virus_hmm	common_virus	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0067	persistent	direct	high	2291	1.0	GCA_013276815.1_00204
GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote	cenote	CDS	39752	40612	GCA_013276815.1	VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815.1_VMLT01000011.1	GCA_013276815.1|VMLT01000011.1	GCA_013276815_1_12	GCA_013276815_1_12@C0	39753	40613	GCA_013276815_1_12_68	GCA_013276815_1_12_68	-	52670	.	PRK07281	methionyl aminopeptidase. 	MITLKSAREIEAMDKAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENFLPLQIGVDGAMMDYPYATCCSLNDEVAHAFPRHYILKDGDLLKVDMVLGGPIAKSDLNVSKLNFNNVEQMKKYTQSYSGGLADSCWAYAVGTPSEEVKNLMDVTKEAMYKGIEQAVVGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGIAGRGLRLREGMVLTIEPMINTGDWEIDTDMKTGWAHKTIDGGLSCQYEHQFVITKDGPVILTSQGEEGTY*	mmseqs_cdd	nonviral_gene	C0	40613.0	0	40613	GCA_013276815.1|VMLT01000011.1@region_1_40613@tool_cenote_CDS_0068	persistent	direct	high	860	0.999	GCA_013276815.1_00205
GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote	cenote	CDS	1	3228	GCA_013276815.1	VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815.1_VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815_1_139	GCA_013276815_1_139	2	3229	GCA_013276815_1_139_1	GCA_013276815_1_139_1	+	7342	.	PDB:3GUD_A	Neck-appendage-protein	AQTALSGDLNLLKQTVTNDISSKQRQLKTDISKQVQALGQIKNDLAGVRSSQARYEETTKGRLTALTNRMEGKANKSEVRQTAETLTSQIDRIQEESSTRISTMTSRFNQRADALDAGVRRLTEGLRTKADISSLNVTAENIRQSVKSLETDTQNKLNQKLSTAEFEVQAGSIRQEILRSTEGKADKTLVVAEAGKLREEFSNMQVGGRNYYRDSEKIQQSRFGFVFDNLDPYLSKSDIGTTWTLSFDCKLDEVDGSFPFHMSHGGANGFGIEGQKEFTATREWQRFRLTGSVFFKEDAPSESKLQMTLFNSDLGYGGTLFIRRIKLEKGTLATDWSPALEDTNGLITQAKASFERTAQELRTDLSAVQAYVTQDGQRQESLQRYTREESARQARAVREQISRDYVGKSSYQEDVEGIHRRIEGVKTSANREITSQIASYRQSADGTFRDISSRITTYKQDMTRDIANLSHQLAGKVETTDFQRVRESSQLYERILGNTENGIADKVARMAMTNQLFQVEVGKYSVSGPNLIKNSDFKNDTNKWVSTQNLGRLVKHSFYHNGQKDLMRLSNATKNKNFLSSHRFNLERNTDYVLNFRGFNNSALASYDVYILGRRAGESDGFTIFKKVVSSKKLSTSRCEDVSVTFNSGEMDNAYIRFENNGSSSGTADLYITEVDLYKGYKPRTWQPHPEDAVADANKKLEATQTKMTQLAGSWLVQNINSAGDLISGINLGANGHNRLSGKLTHITGETLIDRAVIKSAMVDKLKTANFESGSVTTAVLAAEAVTADKVKFDHAFIQKLIANDAFIGELTSKRIFATKIESVVNRSTFLEAYQGQIGGFTIGRFAQGRGRWISGVNQFSVGMGNGEGGSYNGENTAFWANWGYSWNSPGPNAWYVTTLGNMHCRNGANFHGRVDFSDSSRANFYGNTTFSRSPVFLNGIELGSKDVFGDGWNPKGGRNAVVWWNQVGSGSVKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIESKKHEEIGLIAQEAETIVPRIVSRDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMENRHG*	hallmark_hmm	common_virus	NaN	.	0	7342	GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote_CDS_0001	shell	direct	moderate	3020	0.936	GCA_013276815.1_02023
GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote	cenote	CDS	3221	3427	GCA_013276815.1	VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815.1_VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815_1_139	GCA_013276815_1_139	3222	3428	GCA_013276815_1_139_2	GCA_013276815_1_139_2	+	7342	.	.	hypothetical protein	MDNHTIDKLVAESLVDRLADIELNYAHLNVHHRLALAELQAFKAVLEYDPALKELFDETQAKMKGNKE*	.	hypothetical_protein	NaN	.	0	7342	GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote_CDS_0002	shell	direct	high	206	0.995	GCA_013276815.1_02024
GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote	cenote	CDS	3424	3957	GCA_013276815.1	VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815.1_VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815_1_139	GCA_013276815_1_139	3425	3958	GCA_013276815_1_139_3	GCA_013276815_1_139_3	+	7342	.	PF07104.11	Protein of unknown function (DUF1366)	MNYEVAINPYLKGGENVTVVAIKMENKGRYSYEQCELPGDHTQDSEDALIQAVLELVRTELDPTSAIVKNQEQLAKTTEALERANQLMDGMQKVNLQNAQDIEDILARLEELEAQGESDQEETDEDTPQVTDTENQAEEAQPTPAVEDKKESEKEDDISETTNQESPSEDNGGSSNE*	hhsuite_tools	hypothetical_protein	NaN	.	0	7342	GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote_CDS_0003	persistent	direct	high	533	0.998	GCA_013276815.1_02025
GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote	cenote	CDS	3950	4102	GCA_013276815.1	VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815.1_VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815_1_139	GCA_013276815_1_139	3951	4103	GCA_013276815_1_139_4	GCA_013276815_1_139_4	+	7342	.	.	hypothetical protein	MSKITLDQAKIDMYINLLERGAVDFSWVHKRWKDRVRKELKRRGLSHLAN*	.	hypothetical_protein	NaN	.	0	7342	GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote_CDS_0004	persistent	direct	high	152	0.993	GCA_013276815.1_02026
GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote	cenote	CDS	4113	4391	GCA_013276815.1	VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815.1_VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815_1_139	GCA_013276815_1_139	4114	4392	GCA_013276815_1_139_5	GCA_013276815_1_139_5	+	7342	.	PFAM:PF04531.12	holin	MTEIEHLLIRFLFSLIPVVVLYFSMKDRATKQENRMTAIEKDIENLREFRMSANKRLDNHDEQNKAILVLAEQVKSLGEDVRELKTLIQSKQ*	phrogs_hmm	hypothetical_protein	NaN	.	0	7342	GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote_CDS_0005	persistent	direct	high	278	0.996	GCA_013276815.1_02027
GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote	cenote	CDS	4407	4883	GCA_013276815.1	VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815.1_VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815_1_139	GCA_013276815_1_139	4408	4884	GCA_013276815_1_139_6	GCA_013276815_1_139_6	+	7342	.	PFAM:PF14606.5	neck-protein	MVCNLNMTNLAQIDGGHLIKQGDLASTFGFALLDEDYQVISSLEGEQALISLTKEGYQWKKQVAVTSQGVSFHLDAILPIGSYRLEITAGGYVFPSDKSVHIKIVASDKELVTEEVHALKELDIAKEVEKQLAGRTVGESPVGQELPDLLFYYNLGKV*	phrogs_hmm	hypothetical_protein	NaN	.	0	7342	GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote_CDS_0006	persistent	direct	high	476	0.998	GCA_013276815.1_02028
GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote	cenote	CDS	4890	5210	GCA_013276815.1	VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815.1_VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815_1_139	GCA_013276815_1_139	4891	5211	GCA_013276815_1_139_7	GCA_013276815_1_139_7	+	7342	.	PFAM:PF12789.6	tail-fiber-protein	MDTTKLTAFAQAVGEDNKKVNEELKTKVSTSDMNQAITRAKSEVKAEILGEGTPENLDTLKEIAEKITSMGQDENSALLGKVTEVSGRVDQIANLDLVATYNAAKA*	phrogs_hmm	hypothetical_protein	NaN	.	0	7342	GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote_CDS_0007	persistent	direct	high	320	0.997	GCA_013276815.1_02029
GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote	cenote	CDS	5207	5998	GCA_013276815.1	VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815.1_VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815_1_139	GCA_013276815_1_139	5208	5999	GCA_013276815_1_139_8	GCA_013276815_1_139_8	+	7342	.	6V8I_BM	Distal Tail Protein, gp58, Tail-Associated	MSAMSNLENLARAIGEDVKAIKEDSELKDREVKKRLDTLESRPKVHPETLVTKAELEEKGYLTSHQDLSTYAQKWELYNDIPIKARISALENRPSFDTLTPTQRDSLKGDNGHSLNASVRIEGSYKNGSTSRLNLFADVFYDGEAVTSGYTLDYYYRGFGYTNWRSLRNQTPDSAGKFGTWSASQRSGGWFEVRIEVNYRGLRASAFTHLDNVNDGEQGRSGVPGQNIVNQNGSQALNYWAGTQEQYDAITTKDPHTIYDIFK*	hhsuite_tools	hypothetical_protein	NaN	.	0	7342	GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote_CDS_0008	persistent	direct	high	791	0.999	GCA_013276815.1_02030
GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote	cenote	CDS	6007	6324	GCA_013276815.1	VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815.1_VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815_1_139	GCA_013276815_1_139	6008	6325	GCA_013276815_1_139_9	GCA_013276815_1_139_9	+	7342	.	.	hypothetical protein	MRDRVRIMLGSREIVKRYIGDRLVWSSGPSLLLEVLNTRMWQYWGGYNIDIKGNDIKVAAIRYVQLNNSKLIRIQADMYNRGVIYLTGTNLREYIGSVNVKFYRE*	.	hypothetical_protein	NaN	.	0	7342	GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote_CDS_0009	shell	direct	high	317	0.997	GCA_013276815.1_02031
GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote	cenote	CDS	6339	6674	GCA_013276815.1	VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815.1_VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815_1_139	GCA_013276815_1_139	6340	6675	GCA_013276815_1_139_10	GCA_013276815_1_139_10	+	7342	.	PFAM:PF09682.9	Phage-holin	MTQFNEFIIAFATGFLAVAVGSIVKMVKDYLLRKGGEKAVIIAEILAKNAVNAVEQVAAETGYKGDEKLEQARDKVRAELTKYNISMTNKDLDTFVESAVKQMNDAWKGQE*	common_virus_hmm	common_virus	NaN	.	0	7342	GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote_CDS_0010	persistent	direct	high	335	0.997	GCA_013276815.1_02032
GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote	cenote	CDS	6674	7339	GCA_013276815.1	VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815.1_VMLT01000077.1	GCA_013276815.1|VMLT01000077.1	GCA_013276815_1_139	GCA_013276815_1_139	6675	7340	GCA_013276815_1_139_11	GCA_013276815_1_139_11	+	7342	.	COG5263	Glucan-binding domain (YG repeat)  [Carbohydrate transport and metabolism]. 	MDIDTSRLRTGLPQVGYAPYRQVHAHSTGNRNSTAQNEADYHYRKNPELGFFSHVVGNGRVLQVGPVNNGAWDVGGDWNAESYAAVELIESHSTKEEFMTDYRLYIELLRNLADEAGLPKTLDTSSLEGIKTHEYCTNNQPDNHSDHVDPYPYLAKWGISREQFKQDIESGLTIETGWKKNDIGYWYVHSDGSYPKDKFEKVNGTWYYFDGSGYMLARGEES	mmseqs_cdd	nonviral_gene	NaN	.	0	7342	GCA_013276815.1|VMLT01000077.1@region_1_7342@tool_cenote_CDS_0011	persistent	ambiguous	low	2	0.003	GCA_013276815.1_02032
GCA_013276815.1|VMLT01000158.1@region_1_1207@tool_cenote	cenote	CDS	1	1206	GCA_013276815.1	VMLT01000158.1	GCA_013276815.1|VMLT01000158.1	GCA_013276815.1_VMLT01000158.1	GCA_013276815.1|VMLT01000158.1	GCA_013276815_1_58	GCA_013276815_1_58	2	1207	GCA_013276815_1_58_1	GCA_013276815_1_58_1	-	1207	.	CDD:pfam12322	baseplate-protein	KVTGEETAGDWSTGTWGSQDSPTVTNYDAPDKATVAETAVTSTTTDTTEVVKYPQATEDVKESKTVTRTIKYVDATDETTEVATPVTQTVTLTRTNKRNKVTGEETAGDWSTGTWGSQDSPTVTNYDAPDKATVAEATVTSTTTDTTEVVKYPQATEDIKESKTVTRTIKYVDKENEATEVAIPVTQTVTLTRTNKRNKVTGKVTEGDWSTGTWGSQDSPTVTNYDAPDTESVAEETVTSTTANTTVVVKYPQSIADEMERKTVTRTIKYVDATDETTEVGSPVTQTVELTRTNKRNKVTGKVTAGDWSTGTWGSQDSPTVTNYDAPDKATVAEATVTSTTTDTTEVVKYPQATEDVKESRTVTRTIKYVDKANETKEVADSVTQTVELTRTNKRNKVTGEE	hallmark_hmm	common_virus	NaN	.	0	1207	GCA_013276815.1|VMLT01000158.1@region_1_1207@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote	cenote	CDS	19403	19807	GCA_013276815.1	VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815.1_VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815_1_80	GCA_013276815_1_80@C1	1	405	GCA_013276815_1_80_23	GCA_013276815_1_80_23	-	37843	.	COG1598	Predicted nuclease of the RNAse H fold, HicB family [Defense mechanisms]. 	MKYTYLALFEVDTENGGYTITFPDFQGAVSEADTLNEAIYKAREVLEIYTIMFEDEGKEFPGPSSFKALASQLGSDEDILQAISVDTELVRERERSKIVNKTVTLPSWLVEVGKENKINFSQLLQKAIREELQV*	mmseqs_cdd	nonviral_gene	C1	11557.0	19403	30960	GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote_CDS_0001	shell	direct	high	404	0.998	GCA_013276815.1_00892
GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote	cenote	CDS	19856	20041	GCA_013276815.1	VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815.1_VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815_1_80	GCA_013276815_1_80@C1	454	639	GCA_013276815_1_80_24	GCA_013276815_1_80_24	-	37843	.	PFAM:PF07927.11	toxin	MTERELKKLAKKKGFIKTAFGKGSHEVWKHPDGRTVTIPKPKENDYRPGTLGKILKVLEGE*	phrogs_hmm	hypothetical_protein	C1	11557.0	19403	30960	GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote_CDS_0002	shell	direct	high	185	0.995	GCA_013276815.1_00893
GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote	cenote	CDS	20382	20792	GCA_013276815.1	VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815.1_VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815_1_80	GCA_013276815_1_80@C1	980	1390	GCA_013276815_1_80_25	GCA_013276815_1_80_25	-	37843	.	PFAM:PF05263.10	transcriptional-regulator	MYELSNRDLDGIDIELGRYRTLANKIYLRRQELIHNKKHSTEDYTGGKGKTVSSPTETTIIRIEEDQTLRYLEGFKLVVDTLMENLIESDLVIFKMRYLEAGATWEDVAEKLNKTTRYINSRRKAIAKRFIELKGY*	phrogs_hmm	hypothetical_protein	C1	11557.0	19403	30960	GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote_CDS_0003	cloud	direct	high	410	0.998	GCA_013276815.1_00894
GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote	cenote	CDS	21174	21725	GCA_013276815.1	VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815.1_VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815_1_80	GCA_013276815_1_80@C1	1772	2323	GCA_013276815_1_80_26	GCA_013276815_1_80_26	-	37843	.	.	hypothetical protein	MDIREVLSILENLDDKKDKIAKARTKLEEKRKTITGEKKVLFDNIDSFFEDNATSLEQIAKMSESINLLEKEYDTYFWEAKAAIFEYIFKETKRRAEEKKIYKRYQKKLSIILDAYDEIQALKKDVEEIHKGVVGEITQEHSLEVYRTEVNPTSILPFLNPDVSGHMNFSKEYRKIKEYLGKE*	.	hypothetical_protein	C1	11557.0	19403	30960	GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote_CDS_0004	cloud	direct	high	551	0.998	GCA_013276815.1_00895
GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote	cenote	CDS	21736	22587	GCA_013276815.1	VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815.1_VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815_1_80	GCA_013276815_1_80@C1	2334	3185	GCA_013276815_1_80_27	GCA_013276815_1_80_27	-	37843	.	PFAM:PF06673.10	Major-Capsid-protein	MAKKFSLVEKYVRSRGMSIDDKNSKTGLILSQDITSIYDVPEEGKELVDLVNVIEYTGTGGTYETVGFDDEHLSELESEEFRESEIVELRKKQIRTKFEHKTFSGRIPLSSEQVDDGEYNILDFLSNKITRLCRKTRNIEIGKILKEAPEKNVSNFDELKDTINDLNPERHNTLVLSQSLFKFLDKEKSSDGNYILKINKKERYSENLYVDDVIVVSDEVLGVKGDKVAFVGDLYNFATLFERNKNSLRWVSESVIYGMSLMLYTRFVVKKIETACAFFIKWN*	hallmark_hmm	common_virus	C1	11557.0	19403	30960	GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote_CDS_0005	cloud	direct	high	851	0.999	GCA_013276815.1_00896
GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote	cenote	CDS	22744	22980	GCA_013276815.1	VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815.1_VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815_1_80	GCA_013276815_1_80@C1	3342	3578	GCA_013276815_1_80_28	GCA_013276815_1_80_28	-	37843	.	PFAM:PF04883.11	putative-tail-component	MSLTSDLANEIAKTLEAYSEEVEEQIDLIAEEVTNEAVNELKQTSPKRYGKYAKNWRFKKNSKGSFVIYNAMQIQHID*	hallmark_hmm	common_virus	C1	11557.0	19403	30960	GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote_CDS_0006	cloud	direct	high	236	0.996	GCA_013276815.1_00897
GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote	cenote	CDS	23065	23259	GCA_013276815.1	VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815.1_VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815_1_80	GCA_013276815_1_80@C1	3663	3857	GCA_013276815_1_80_29	GCA_013276815_1_80_29	-	37843	.	.	hypothetical protein	MTVDTSLGYVVASKFSIDPEKRQKIFSKCKNEDSSLESGNHEILEKYADENTKSTVRKNDFKSS*	.	hypothetical_protein	C1	11557.0	19403	30960	GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote_CDS_0007	cloud	direct	high	194	0.995	GCA_013276815.1_00898
GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote	cenote	CDS	23349	23504	GCA_013276815.1	VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815.1_VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815_1_80	GCA_013276815_1_80@C1	3947	4102	GCA_013276815_1_80_30	GCA_013276815_1_80_30	-	37843	.	PF13128.6	Protein of unknown function (DUF3954)	MDEMKFSTEKGFIVYEKCGIIEIEKVPRFGEITLVYSDGKFTHLVKKETKK*	hhsuite_tools	hypothetical_protein	C1	11557.0	19403	30960	GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote_CDS_0008	cloud	direct	high	155	0.994	GCA_013276815.1_00899
GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote	cenote	CDS	23510	24355	GCA_013276815.1	VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815.1_VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815_1_80	GCA_013276815_1_80@C1	4108	4953	GCA_013276815_1_80_31	GCA_013276815_1_80_31	-	37843	.	PDB:4M4W_K	Replicative-helicase	MKEQFKEFNNRKISDKVCDIHQVNYWEISIPVVGSSERKIQSFCPKCVKGDIKQKEKDLLQRFDDRQTYFKTYDVLMRDSTIPKELKGATFDNFFVKTTEEGQMLEFVKGQAQKYLAGMTGNTLISGSTGIGKSHLSLALAKEINESFREKNDPKSVLFVSLTEIIKQIKEGWAYGRNANLTEYEAVKKLVDVDFLIIDDLGAKNGTVTPKSDWEQDFLFDIINNRETTIFNTNLDSSELRTVYNARNSSRILKGLEGNTFKAFTIKDKRYTINTVRGEKG*	rep_hall_hmm	common_virus	C1	11557.0	19403	30960	GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote_CDS_0009	cloud	direct	high	845	0.999	GCA_013276815.1_00900
GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote	cenote	CDS	24367	25230	GCA_013276815.1	VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815.1_VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815_1_80	GCA_013276815_1_80@C1	4965	5828	GCA_013276815_1_80_32	GCA_013276815_1_80_32	-	37843	.	PFAM:PF07261.10	Replication-initiation-and-membrane-attachment	MMAKTKIYFWLKVDKKFFDNLFIKRLKNMPGGYTMTVIYIRLMLESLEDDCILYYEGYFDNLIQELALKLDVSEDDINMTVAYFTKCGLIQIDDDGHATLSQAKAMVESETNWAKYKREQRKNSQDLPKLDNVQNKKTISNSRPTEIEKENRVNSKSNNLYLDNILSGNPDYNFPTWLEETAIKDLEKTKYKELWIPIVYLNQVANKRYKFVDKTKRLLLARFKEGYTLEDFKQVIDIKTAEWKDSPEFSKYLRPETLFGSKFDGYLNQKPKTIKGKSEDNFPDLPF*	rep_hall_hmm	common_virus	C1	11557.0	19403	30960	GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote_CDS_0010	cloud	direct	high	861	0.997	GCA_013276815.1_00901
GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote	cenote	CDS	25214	25534	GCA_013276815.1	VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815.1_VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815_1_80	GCA_013276815_1_80@C1	5812	6132	GCA_013276815_1_80_33	GCA_013276815_1_80_33	-	37843	.	PFAM:PF12964.6	HTH-DNA-binding-protein	MGVIFSLQGLSHGGTKMFEKMIEDLKSKILEAVERYLKSHEKVPQKRLDLISKVELKEELGIGDKTLTKWEGAGLPQYIPPIEDTRKAYYKISDVLKFLGVDDGKD*	phrogs_hmm	hypothetical_protein	C1	11557.0	19403	30960	GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote_CDS_0011	cloud	direct	moderate	273	0.85	GCA_013276815.1_00902
GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote	cenote	CDS	25488	25697	GCA_013276815.1	VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815.1_VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815_1_80	GCA_013276815_1_80@C1	6086	6295	GCA_013276815_1_80_34	GCA_013276815_1_80_34	-	37843	.	.	hypothetical protein	MNELDLTNIQAVIFIVVAIGLLIYLNHLDREKSAKIERENQQTIETPNESLTPDYGRYIQLAGVKPWGY*	.	hypothetical_protein	C1	11557.0	19403	30960	GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote_CDS_0012	cloud	direct	high	209	0.995	GCA_013276815.1_00903
GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote	cenote	CDS	25690	25899	GCA_013276815.1	VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815.1_VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815_1_80	GCA_013276815_1_80@C1	6288	6497	GCA_013276815_1_80_35	GCA_013276815_1_80_35	-	37843	.	.	hypothetical protein	MTVNTNDVLVDYEGLCCQLTDTLLVLEMASMEDSKQSSALLNTVIQAMNQLISEHTQQANDYRKGIKHE*	.	hypothetical_protein	C1	11557.0	19403	30960	GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote_CDS_0013	cloud	direct	high	209	0.995	GCA_013276815.1_00904
GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote	cenote	CDS	26215	26475	GCA_013276815.1	VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815.1_VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815_1_80	GCA_013276815_1_80@C1	6813	7073	GCA_013276815_1_80_36	GCA_013276815_1_80_36	-	37843	.	.	hypothetical protein	MENEFKTVTNAKGLEIPKYPKDFKKLVEKDRQLAEYLCMNYEDLESEDLGAFLETVEQGFSWILDLIESKDLLYKPKSGSNHAKRK*	.	hypothetical_protein	C1	11557.0	19403	30960	GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote_CDS_0014	cloud	direct	high	260	0.996	GCA_013276815.1_00905
GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote	cenote	CDS	26487	27092	GCA_013276815.1	VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815.1_VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815_1_80	GCA_013276815_1_80@C1	7085	7690	GCA_013276815_1_80_37	GCA_013276815_1_80_37	-	37843	.	PFAM:PF02498.16	transcriptional-regulator	MELVYMDGKKEPYTTSEIIAECAEVTHHTIQELLRKHKADFENYGIIAFEMRKLDGRGRPMKIYRLNEQQATLLITYLKNTEPVRQFKMNLVKAFFEMRDELSKRYLQRELEKPKRKSLTEAIQTWEKAPKHAYSTLTNLLLKGVTGKNKAQLMKERESKNGIDGLTSAELTNYQRLEDMAIAMINLNRGYSEIKELIFKA*	phrogs_hmm	hypothetical_protein	C1	11557.0	19403	30960	GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote_CDS_0015	cloud	direct	high	605	0.998	GCA_013276815.1_00906
GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote	cenote	CDS	27318	27515	GCA_013276815.1	VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815.1_VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815_1_80	GCA_013276815_1_80@C1	7916	8113	GCA_013276815_1_80_38	GCA_013276815_1_80_38	-	37843	.	PFAM:PF10078.8	transcriptional-regulator	MKNNMRLLLAKQRKKTADVAEATGISKSTLTALYYERAKNPSLDTLKKVSSYLGVTLDEFLDTKD*	phrogs_hmm	hypothetical_protein	C1	11557.0	19403	30960	GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote_CDS_0016	shell	direct	high	197	0.995	GCA_013276815.1_00907
GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote	cenote	CDS	27719	28282	GCA_013276815.1	VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815.1_VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815_1_80	GCA_013276815_1_80@C1	8317	8880	GCA_013276815_1_80_39	GCA_013276815_1_80_39	+	37843	.	PDB:2FJR_A	Repressor-protein-CI	MDNKLKKLRLNKEFNGKVGMTQQEIADEIGVTKRTYIYWEKGERQIKPEKAQQLADFFGVSVATLLGHDKISPEEMTTKLQDFFKNLDMNELNNIKPNYDLLKKVQSAYENIEKHINNPKKYENFGKGLVNFNQSYMLTIEKLIINDAEIGTNFADILINYISLNDYDKKIAFDLVKKLSERNDEKE*	common_virus_hmm	common_virus	C1	11557.0	19403	30960	GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote_CDS_0017	cloud	direct	high	563	0.998	GCA_013276815.1_00908
GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote	cenote	CDS	28315	28494	GCA_013276815.1	VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815.1_VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815_1_80	GCA_013276815_1_80@C1	8913	9092	GCA_013276815_1_80_40	GCA_013276815_1_80_40	+	37843	.	.	hypothetical protein	MKEKFFGTGSGNLTELENVINTQVAKGYRLHTITTANGGSKGLGGGDRIQATMVFEKIL*	.	hypothetical_protein	C1	11557.0	19403	30960	GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote_CDS_0018	.	unmatched_CDS	none	0	0	.
GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote	cenote	CDS	29050	29631	GCA_013276815.1	VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815.1_VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815_1_80	GCA_013276815_1_80@C1	9648	10229	GCA_013276815_1_80_41	GCA_013276815_1_80_41	+	37843	.	COG4823	Abortive infection bacteriophage resistance protein  [Defense mechanisms]. 	MIRQIVKIIDKHKSSRKSNSIQHYFNKHSDVPFWVIVDYLTFGDILAILKSLPLSLQDRIAKKSYSFISEHCTIKKTFTRDMLISFVENLAETRNVCAHDNRLYGFKCRNSLKYYPDLHDKHNIKNTDAKSSPYHTMIALQCFLSANEYAKLHNTLLSRFKDFSKHLHTLSIDFFLNELGFPPNWQQSNKLVH*	mmseqs_cdd	nonviral_gene	C1	11557.0	19403	30960	GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote_CDS_0019	cloud	direct	high	581	0.998	GCA_013276815.1_00909
GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote	cenote	CDS	29796	30959	GCA_013276815.1	VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815.1_VMLT01000020.1	GCA_013276815.1|VMLT01000020.1	GCA_013276815_1_80	GCA_013276815_1_80@C1	10394	11557	GCA_013276815_1_80_42	GCA_013276815_1_80_42	+	37843	.	PDB:1Z19_B	Integrase	MKITQHTKKDGSTVYRSSVYLGIDTVTGKKVKTTISGRTKRELKAKALQAQIDFEKGGSTVYKAATLLTYGELVESWWDSYRHTVKPNTMVVYKGMLKNYLLPAFGSYKLDKLTPPIIQKVVNDWAQAYNSGYGYKNYSLLHSTNKRILQYGVVLQALPSNPARDTIVPRKAKNTPTKIKYLNDTDLKKFLDYLDGLDNTYKNFYDTVLYKTLLATGLRIGECLALKWSDIDLQDGTISVTKTLNLLGTLNSPKSKSAIRTLDLDKKTLLMLRLYKARQAENGRTIGISYQKVFPNSFDEYKKTNRLQYRLKEHLKKADCPSLGFHAFRHTHASILLNAGLGYKDIQTRLGHSKISMTMDIYSHLSETNQKKTAAVFEMALEKLKSS*	common_virus_hmm	common_virus	C1	11557.0	19403	30960	GCA_013276815.1|VMLT01000020.1@region_19404_30960@tool_cenote_CDS_0020	cloud	direct	high	1163	0.999	GCA_013276815.1_00910
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	1	1376	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	1	1377	GCA_013276815_1_81_1	GCA_013276815_1_81_1	-	76198	.	PFAM:PF07902.10	minor-structural-protein	MDALTRRQFDRAMFAKERTLAIRVGDYTSRDIKEASFEYGYIKGDTYKPGGTCAGSGKITFTSIITTFNKLDTLHLEIGLLVGDTYQWVKMGEYFINDIEIDRNRNTTTLELMDGMFKLNREYVTDLHFPAEVREVIQEICLKTGIELANDYFGISAMRYHVEQVPEGKKLSFRDMLSAMTQMIGMSCFFNREGKMEIRDLTESNITINADSYFLHGLTKSEIEYQIAGITCKTDKKPLTVGMKTGRSLELDNVFMTQSALNDLYYKLKNLTYYPYNLNYQGHLLLEVGQWVTIQTNKKETFKVPVLSQSFTFKGGLRGRISADSKAGNDTQYSYEGTITKQIKQQDGIEAKIQAQIEAADAAFDAEFTKREKAITDAIELAKAKAEEVKQEVSDTINQRFNSFHDEPLRESRRKAEEALRQAGASSSLAQEAKQIGLDSVARLEAFKSQTRSAQTALS	common_virus_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	1381	1731	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	1382	1732	GCA_013276815_1_81_2	GCA_013276815_1_81_2	-	76198	.	.	hypothetical protein	MAQLTINGVAVKPPKSFQVGIQDIDGETGRNANGDMVRDRITTKRKLDCEWGMMTQGELSQLLHAVSSEFFEVSYPDPMDGQVTKTFYVGDRTAPSYTFTEKFKPWSGAKFNLVER*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0002	shell	direct	high	350	0.997	GCA_013276815.1_00918
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	1740	4763	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	1741	4764	GCA_013276815_1_81_3	GCA_013276815_1_81_3	-	76198	.	UniProtKB:A0A0R1V141_9LACO	minor-tail-protein-	MAMIESTEAFKKFANGQSWQQLDYQTQQQIRLMAILEQATAKYGNTLSNSVNGRISLFKSLMKDAALNLGNSMLPIINAIMPVLNSFAMVLKNVTAKLAEFIALMFNKKATVKDGVGGAVGDMGNAMKDAAGGAGDLADAVDDAGDSAGGLADNLGDSAKNAKKAAKELLGLLGFDEINILQKPKDDDAGGSGGGKGGKGKGGGGGPFKDILPEVELTDMDNQFKSIFDGLGDKLKGLFDLFKKGFDAAFRPEGIERIKTALDQIAKTMGEIATDQRVVNAFNRMAEKIAYALGQVTGSIATIGLGIGVFLAESIANGLGRQKERITRALVALFDNIGNIAEAVGNIAQAFSSAFYDVITSTGAVRIGSAIVSTLLSLTSTIVEVGSKLAGSLFKGFEKVVVTSAPKISSVFQSLLDTVAPVFESIERSVNKFGDGLSRVYDEHVVPAINSIANAFNGLIDIIQILWENSWQPFAEFLSGVFGVSIEGISDLLGGGLLATLGLLADAIKLVADGFAVFSDWCKENKEPILALITAWQTINFLSWAEQAGGLAGAFELLSGKVSFIVSGIKNLGLALKALTFDKLVSFGETIYLNALYAKDFVVNSGKTIAQLGKTALELGKSALAWTAHTAKMGLATAAEFAHSVAAGVATAATWAFNAALAVLTSPITLVIAAIAALIAIGVLLYQNWDTVVEFAKTAWQGLCDFISGICQAIGEFFSGLWTKLQEIFEPIGQWFGEKFQQGWGAISNTFSKLGSWFGDRWNESKDALAEANTWLGDKFKSGRDKVNSAFEKVGSWFGDRWNDIKDGVKEADTWFGEKFESAKKKTQNPFQKIGSWFGDRWKNMQDALKEIPNWFKNLFNDAMDNAKNIVKSGIDKLKSFFNFDWSLPKIKLPHFNISGSFSLMPPRIPSFSVDWYARGGVFNSPSIIGVGEAGQEAVMPLERNTGWISILAQKLAERMPANNVPTGYSLPAGDIVIQIAGHEFGRVAIQEINKEHERAGQTLLKI*	hallmark_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0003	shell	direct	high	3018	0.998	GCA_013276815.1_00919
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	5065	5628	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	5066	5629	GCA_013276815_1_81_4	GCA_013276815_1_81_4	-	76198	.	PFAM:PF04582.11	tail-length-tape-measure-protein	MATLDELKVMIDAEIAPFRKKMKEVENQVKGTSDQVKNATAKVREQSNSIGSAFGKLAKFAGFAILGKKLLDVGMYSTQTALEVSAAMNQIKRQMGESSQSFLKWVNDNANAMNMGVGEATNYGAVYSNLFSGFIKDTNKLSAYTAKMLQTSAVVAEGSGRTITDVMERIRSGLLGNTEAIDFCRTA*	phrogs_hmm	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0004	shell	direct	high	563	0.998	GCA_013276815.1_00920
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	5615	5965	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	5616	5966	GCA_013276815_1_81_5	GCA_013276815_1_81_5	-	76198	.	.	hypothetical protein	MFLDIGGKPLDFWDLTVLEIREMIESYNRVKIQERKEKIIDSYRLSQMISNHVSLFLSKDAKVFEFWEYAPELFVEEQQAVEQERQRQALLLHKERMREFAERHNRKRKEEMNGNS*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0005	shell	direct	high	350	0.997	GCA_013276815.1_00921
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	6004	6384	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	6005	6385	GCA_013276815_1_81_6	GCA_013276815_1_81_6	-	76198	.	PFAM:PF12363.7	tail-assembly-chaperone-protein	MALPYSIWKISDEKELKLRLSSHQAAKVEEKIGMNLLKIFMPEAGEEFPLPLLKVVLLLIHGALQKYENGYSLEDVYDLYDEYVDNGGDQTTFMTEVLMPLFEVSGFTPRGSKGKKTSKKKMTVVE*	hallmark_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0006	shell	direct	high	380	0.997	GCA_013276815.1_00922
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	6389	6802	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	6390	6803	GCA_013276815_1_81_7	GCA_013276815_1_81_7	-	76198	.	PFAM:PF16463.4	tail-tube-protein	MLANGITLSYSETKGSYTKLVGLKEVPEFGIEPEKVENTTLEDKVKKYEFGIGDAGELEYKFSYNNSSETAPYRVLRKAADDKKKLYFEQAYPDGTKVNFEGQVSVKLGGGGVNAVIEFTLKIALQSELEFTDGLGG*	hallmark_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0007	shell	direct	high	413	0.998	GCA_013276815.1_00923
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	6805	7173	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	6806	7174	GCA_013276815_1_81_8	GCA_013276815_1_81_8	-	76198	.	PFAM:PF05657.10	tail-component	MINIKPVIYKELQKVADNVTDTYPSDWETFPVVIFLEEQNKPGDWFDDQEQKSSIRYKVDIFDDTSTSELAVKINQIFESLGLRRTDCQDVPDPSHLRHKVMRFEGVVDLHSELVFQFRMEN*	hallmark_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0008	shell	direct	high	368	0.997	GCA_013276815.1_00924
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	7170	7685	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	7171	7686	GCA_013276815_1_81_9	GCA_013276815_1_81_9	-	76198	.	PFAM:PF04883.11	putative-tail-component	MSGLLGADRLIAKCRRLASKKTGEDIVLRAVHNATIKVVQADAKRLAPGNNGELRNSIKTRVKMDGDKAIGEVYTNLHYAPYVEFGTGPKGQASHSGISPEVSVTYRSSPWYVHEDQINVGPYHFQKIGEFYKMYGQPAQPYLYPALRDNQERVSKNISDYVRRKIREQIK*	hallmark_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0009	shell	direct	high	515	0.998	GCA_013276815.1_00925
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	7660	7998	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	7661	7999	GCA_013276815_1_81_10	GCA_013276815_1_81_10	-	76198	.	PDB:2KX4_A	head-closure-knob	MFLKQSRLKPYPMRRFEKTVTEEGVAKEGYVKEAETIRLELWPASSKLQSELYGERVNDILNANANKSATIKVKDGVCIDSQTEVTHRVISKKVYTHHQVLELERVRATRGR*	hallmark_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0010	shell	direct	high	338	0.997	GCA_013276815.1_00926
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	7979	8290	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	7980	8291	GCA_013276815_1_81_11	GCA_013276815_1_81_11	-	76198	.	PFAM:PF05135.12	head-tail-adaptor	MSIELLKKLTGEEDTQLLMLLQTRATNLILSETNRTSLTPALSRLIPEVAIELHNRSGAEGEHSRTEGGIAVVYGENGLSTGLLQRIRMHRLARVAGHVFEAE*	phrogs_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0011	shell	direct	high	311	0.997	GCA_013276815.1_00927
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	8292	8480	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	8293	8481	GCA_013276815_1_81_12	GCA_013276815_1_81_12	-	76198	.	.	hypothetical protein	MKFKIKQDFYDWELNVKRLAGEELEITEERYAELADNFASNGVAISDVLEEILPEPEFLEED*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0012	shell	direct	high	188	0.995	GCA_013276815.1_00928
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	8470	8652	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	8471	8653	GCA_013276815_1_81_13	GCA_013276815_1_81_13	-	76198	.	PFAM:PF09124.9	endonuclease-VII	MSLLLRRHYIQEEQAGQYSDLENKTLEELKNLAKEAGITGAYKLSKAEIVEVLEDLKSEI*	phrogs_hmm	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0013	shell	direct	high	182	0.995	GCA_013276815.1_00929
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	8664	9506	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	8665	9507	GCA_013276815_1_81_14	GCA_013276815_1_81_14	-	76198	.	PDB:4AN5_F	Major-Capsid-protein	MTAGQTKLATMVNPEVMADMVSAKLPKLIKFTPLAYVETALQGQPGNTLTVPAWEYAGDATEVGEGQAISPDKLTTKKTTMTIKKAAKGYEITDEALLSGLGDPLGQATYQLGLAIANKIDDDLVAVAKTATQHITETPTTLAAIDKALEIFEDEEDARYVAIINPKDAIKLKTDVAKEWTKGSELGADMVVSGTFGEVAGVQIVRSKKVDEGKGFIVKVSPSQTQTDDANKYGAFVIMLKRDVAIETDRDILKKTTVITGDEHYGVYLYDPTRVVKFGE*	hallmark_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0014	shell	direct	high	842	0.999	GCA_013276815.1_00930
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	9512	10081	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	9513	10082	GCA_013276815_1_81_15	GCA_013276815_1_81_15	-	76198	.	PDB:6B0X_d	capsid-scaffolding-protein	MNEETQTVETVEEQKVPAEPAQQPQDEKKYTDADVDAIIDKKFAKWKSEQEARENEAKKLAKMNADEKQKYQLDQREQELADREKAIARKELTAEAKAMLSERDLPVELVNVVDLTSAETVSQSVAVLQKSWEQAVQKGVQEKLKGGAPMKQAPVDSDGITKEEFARMGYQSRNELYQKNPELYKKLKG*	hallmark_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0015	shell	direct	high	569	0.998	GCA_013276815.1_00931
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	10371	11867	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	10372	11868	GCA_013276815_1_81_16	GCA_013276815_1_81_16	-	76198	.	PFAM:PF06152.10	minor-capsid-protein	MDKAEKQADQFDKVYQEAKTYLDKEVNKIFDKFQRDYGLSQVDARQVLKNMKDKKNLNELRKVLEARPNDPNIQRLLADLDSPAYSFRMKRLERLSDDLDRMRESIYHSEKTGSDAFYSDLMKDSYYKASFDLQQQTGLAYGFSGLPESEIKHLQSFSWVGDGSTYSTNIWKNTGKLTSSIKDELLMSLMTGRGTRETAQAIAERFDVGQNDARRLVRTESAFFHNQMELLSYEEADIEKYIFVAVLDKRTSHICQEHDNKVYDRDKATPGVNCPPMHPWCRSTTVAYDEDADYSKLKRRARNPETGKTELVPADMTYKEWYSKYVAKDVKNEIQDYKKSDQTVSRYNTQKLFSDVSNAWDEIGKGGLSKEQLVGLLKSEYELGNFSSDITKLIGVSSAYIDVSSLATSLVRHGQQYSLDEFMLIKEAVQKPYLILDNSERVEKSIISYVKIPNKDKVIMEAVMVPRDEMLVIHFNKVGIRQVKKNGKNMLTLYKKEK*	hallmark_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0016	shell	direct	high	1496	0.999	GCA_013276815.1_00933
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	11830	12267	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	11831	12268	GCA_013276815_1_81_17	GCA_013276815_1_81_17	-	76198	.	PDB:5A20_A	Portal-Protein	MGLEMITKTKEANYKRGLRQRIAIFAHYLGMKQIALESHSIVPQFSRGLPKNLLEISQIVNNLEGKVTNRQLISLLPFVEDPDAELEALEEEKKKNMEDMPMFNKDNTKPEDEVEDEESGVLGEEESQSDLPADGQGRKAGRPVR*	hallmark_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0017	shell	direct	high	437	0.998	GCA_013276815.1_00934
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	12497	13030	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	12498	13031	GCA_013276815_1_81_18	GCA_013276815_1_81_18	-	76198	.	PFAM:PF05551.10	homing-endonuclease	MIKDKMHKHLNQVYYSMLARCYDEKHWAYKWYGKRGIGVSDEFSDVAKFRSWAMQNGVEFGLQLDRIDNDKDYSPSNCRWVPEHTNKRNRSDNVKYKGYILRDYLKKLSEENNISFSTLVYRYYRSIKRDDIIVNDETIDDILLNYKKYDLRQFSKGVDMSGKTIVRDEKGRFVTYY*	common_virus_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0018	shell	direct	high	533	0.998	GCA_013276815.1_00935
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	13159	14178	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	13160	14179	GCA_013276815_1_81_19	GCA_013276815_1_81_19	-	76198	.	PDB:5A20_A	Portal-Protein	MYQYLTYPRDGYDEGSLKKDLIYKLITIHSTEGSHLKKLKSYYLGEHAILEHTRRNVNAPNYKTVANHAKDIADTATGYFMGNPIKYNNTADGDIDELLTVFDGAEIDQVDAQNALNMAIYGRAYEYIYAKEGMAELDSTSIDPENTFMVYDDSIERKPLFAVYYYEVKDDTKDTTKYQAEVFTENLHYHMVLRSTDSGTTQNEQVTPHNLGQIPIIEYRNNHFAIGDYEQQISLIDAYNSLMGNRVNDKEQAVESILVLYGTQLADTPEDAKVAMKILSEEGLLELPGDSARAEFLKNTLDESATEILRTALKEDIYTFSHVPNLTDENFAGNTSGVK*	hallmark_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0019	shell	direct	high	1019	0.999	GCA_013276815.1_00936
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	14190	15488	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	14191	15489	GCA_013276815_1_81_20	GCA_013276815_1_81_20	-	76198	.	CDD:COG1783	Large-Terminase	MSQTYQIKQNDIVVDLPKTVGVGYGQFWRSRNLYRVVKGSRGSKKSKTTALNFVVRLLKYPWANLLVIRRYSNTNKQSTYTDFKWACNVLGVTHLFKFNESLPEITIKATGQKILFRGLDDELKITSITVDVGSLCWAWFEEAYQIETEDKFSTVVESIRGSLDVPDFFKQITVTFNPWNERHWLKRVFFDEETRRADTFATTTTYKCNEWLDEVDIKRYEDLYHTNPRRARIVCDGEWGVAEGLIYENVTVKEFNKDELLQDSANKLCIGLDFGFTHDPTALCCSLINDTTKEIYVFDEAYKVGLITKAVAKMIKDKGYHRSQIIADSAELRLIEELRSEHGITRIKESRKGKDSIMAGVSKLQGYAIYVHPDCKNIMDEFYSYCYQQDKEGNWLNKPEDKNNHLMDALRYSLQCIEGGKATVRRRSDYGL*	hallmark_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0020	shell	direct	high	1298	0.999	GCA_013276815.1_00937
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	15466	15939	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	15467	15940	GCA_013276815_1_81_21	GCA_013276815_1_81_21	-	76198	.	PFAM:PF03592.15	Terminase-small-subunit	MNERQRRFADEYIISGNAYQSALKAGYSEKYAKARSSELLDNVGISDYIKNRMEELQDEKILTQKQILVMLSEIASGQAKETTVVTTKVAELMTDPVTGKSVKVYNEIPQLVEYPTKNSDRNKALELLGKRHKMWTDKVEADVSGTVVFANESDIPD*	hallmark_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0021	shell	direct	high	473	0.998	GCA_013276815.1_00938
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	16434	16880	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	16435	16881	GCA_013276815_1_81_22	GCA_013276815_1_81_22	-	76198	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MRLLKKVDVQFTKKNVYDVLESYRSYVRMAGAEYLPKITTTYSFEPKTFTGKNTATENMVIEHVDAEAEVLEIERAVNCIMDPYVRQVIAKKYMDMKIQLSDKAIYMDLGYSESEFYRMLSRGALEFAEAYRKGKLIVFRKFLGDICK*	mmseqs_cdd	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0022	shell	direct	high	446	0.998	GCA_013276815.1_00939
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	17009	17224	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	17010	17225	GCA_013276815_1_81_23	GCA_013276815_1_81_23	+	76198	.	PFAM:PF04014.17	transcriptional-regulator	MNTVKTRKVGNSVTVTIPKTLNVPEGQEMFVYKGVDNVIVLAPKIPDPFSGDADLRMEDDFEGVKFLDSEI*	phrogs_hmm	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0023	shell	direct	high	215	0.995	GCA_013276815.1_00940
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	17208	17561	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	17209	17562	GCA_013276815_1_81_24	GCA_013276815_1_81_24	+	76198	.	COG2337	mRNA-degrading endonuclease, toxin component of the MazEF toxin-antitoxin module [Defense mechanisms]. 	MTAKYDYIPEKQDIIWIDFDPSVGREIQKRRPAIVVSRREYSERTGFVAVCPITHGQSRLEEQGLLVPVRSNKVDGSVNPLQLYTFDFRERRAQKITTMDTTSFQKVVQLYNFIFEA*	mmseqs_cdd	nonviral_gene	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0024	shell	direct	high	353	0.997	GCA_013276815.1_00941
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	17582	17995	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	17583	17996	GCA_013276815_1_81_25	GCA_013276815_1_81_25	-	76198	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MIPKFRAWDVLSEKMIDEILMISFVRKEIIGKFSDGSTSVPLKFKDERNGEDVILMQSTGLKDKNGKEIFEGDVLEIEDEGEVLGNAKLTWDNEQAVFMIEAVSVDDIAPFHEILSDESYSYRVVGNVYENPELLEN*	mmseqs_cdd	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0025	cloud	direct	high	413	0.998	GCA_013276815.1_00942
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	17992	18483	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	17993	18484	GCA_013276815_1_81_26	GCA_013276815_1_81_26	-	76198	.	PFAM:PF03819.16	MazG-like-pyrophosphatase	MNTLEKVKQWFIDRDLENGGRLDKQSLKLSEEFGELCAGYLKKNEKLTKDSIGDCVVVIVGLALLIKADVHKIFEESGFAESKDVMENLKWLNVNICNFQLRHGSRQKKYCRYNLVRSIGYLKSISKILGYSFEECFELAYQEIKDRKGRWIDGIFVKEEDLG*	phrogs_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0026	cloud	direct	high	491	0.998	GCA_013276815.1_00943
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	18480	18740	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	18481	18741	GCA_013276815_1_81_27	GCA_013276815_1_81_27	-	76198	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MKRFIAIWILVSAGLNIWQMDRIRDLEEKKPLVIYKADNAGDEIFGKVVEKGRHGKLYTLTIRDYGIFVVTKDVYEKIRVGDEVLL*	mmseqs_cdd	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0027	persistent	direct	high	260	0.996	GCA_013276815.1_00944
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	18737	19213	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	18738	19214	GCA_013276815_1_81_28	GCA_013276815_1_81_28	-	76198	.	pfam08241	Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	MGDIRILDACCGSRMFWFDKNESHTTFMDIRQEKFEIHGKKVNVNPDVVGDFRDMPFDDETFNLVVFDPPHLKWAGQNSIMRSQYGQLDKVTWPEDLAKGFEECMRVLKVGGTLVFKWSDCQINVKEVLKSVPFKPLFGQQRGTTHWMTFMKFKEVTY*	mmseqs_cdd	nonviral_gene	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0028	shell	direct	high	476	0.998	GCA_013276815.1_00945
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	19213	19707	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	19214	19708	GCA_013276815_1_81_29	GCA_013276815_1_81_29	-	76198	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MKVQRLIEKYKKLEGVWNAEGAELARQIFLQDLEQLDKPQPVKVKKFVAEFITEQKKLGHTLSYSIDASMSDIVAEWYWDNSELFALAWIFGYEIEEEKRYRVKMKGIVNALSFLSYHKNADIWTVTDKNNSDGHRAHHTRKELEEAGFGWVFDCEGIEVEEVE*	mmseqs_cdd	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0029	cloud	direct	high	494	0.998	GCA_013276815.1_00946
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	19875	20042	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	19876	20043	GCA_013276815_1_81_30	GCA_013276815_1_81_30	-	76198	.	.	hypothetical protein	MIGVTYQEIHLFVEFLKKQYGQGRPDYIEALNDLDGMVEVSYREAIERFLDDEVR*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0030	persistent	direct	high	167	0.994	GCA_013276815.1_00947
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	20058	20438	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	20059	20439	GCA_013276815_1_81_31	GCA_013276815_1_81_31	-	76198	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MINSNDRPHFHQKAKTTKFLRQLAEYEGKNVLRDYFGLPYSEDKPCKVKVRIYPPTNRKYDPPNWSPTSKALFDGLTDAKIWTDDNYNVIVSTEFMHGGKSGNKNYRIELEIYEYHEILQRIVDGI*	common_virus_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0031	shell	direct	high	380	0.997	GCA_013276815.1_00948
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	20480	20719	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	20481	20720	GCA_013276815_1_81_32	GCA_013276815_1_81_32	-	76198	.	.	hypothetical protein	MTELVKVDVQCPFCGECYHRMVKIKPSSIRCRAYSKFLHLKWTGNTPTSTNKAGFGRLAYDPYNNNEEIMELNEVFAKT*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0032	cloud	direct	high	239	0.996	GCA_013276815.1_00949
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	20741	21244	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	20742	21245	GCA_013276815_1_81_33	GCA_013276815_1_81_33	-	76198	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MINNVVLVGRLTRDADLKYTQSNIAVATFTLAVNRPFKNEAGDRDADFINCVIWRQSAENLANWAKKGSLIGITGVIQTRSYDNQQGQRIYVTEVVASNFQLLESRNSQQNNQGYQQQGHSNQGSSFQNGNSYGQQGSFFEWNTTNPVPDFTRDNNPLDISDDDLPF*	common_virus_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0033	cloud	direct	high	503	0.998	GCA_013276815.1_00950
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	21234	21410	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	21235	21411	GCA_013276815_1_81_34	GCA_013276815_1_81_34	-	76198	.	.	hypothetical protein	MRCFYVSGKIADLDLGSEINAENSFMAAIEFVKRYTSLLKFGSNEIKVSEVEEVQNDK*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0034	shell	direct	high	176	0.994	GCA_013276815.1_00951
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	21432	22421	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	21433	22422	GCA_013276815_1_81_35	GCA_013276815_1_81_35	-	76198	.	pfam07083	Protein of unknown function (DUF1351). This family consists of several bacterial and phage proteins of around 230 residues in length. The function of this family is unknown.	MVKDVTNSLTEIKVDFQPAVINVDYDSVEKQLAAIVAQYTDYEVTASTYKIDYDERTRLNKLKEALETRRKEIKNNINNPYKEFEKWYKKTVEPLDNVISNITAGLNVIDEHERLMRVDVVRAIFEDKCMVAGIEKSTFADKYDEYSLKKYFKTDKYELKKTTLDEMDALVLSEFDALEEYKANKQAIQEQAQEYDLPADSYIRHLEDGKSLVGVFKMMKTDRDAEIARKEQKEAQEKAEAERLAEIEQLAKENANAHIKAYDAETGEILEQGIITPEPQNNAREVAKFEPSEPLTIDLRLTLHGGLEQWENTQEYFEDNFIGFESLED*	mmseqs_cdd	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0035	shell	direct	high	989	0.999	GCA_013276815.1_00952
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	22425	23117	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	22426	23118	GCA_013276815_1_81_36	GCA_013276815_1_81_36	-	76198	.	pfam04404	ERF superfamily. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to ERF.	MASLTFPELQQKMQLEKKKSKDVKYAFRNAEDIYTTFKELKSDRSVIVTDELVELVGKIFVKATAVAFNDERDERYQSTAYAEMSPVPVFNTQKGQIKQMQDPQWTGAVSSYARKYALQGLFAIGEKDIDEYPVEESQEQGQNNQQQKPNNQQAQEQNQVRYIDNIQYQEIIKNVEEIATIKGAPFDTVANFVLRKYQIDDFHKVPVDGYNIVIDYLTKQIQKAYEKQGV*	mmseqs_cdd	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0036	shell	direct	high	692	0.999	GCA_013276815.1_00953
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	23105	23293	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	23106	23294	GCA_013276815_1_81_37	GCA_013276815_1_81_37	-	76198	.	.	hypothetical protein	MIQELHEEIDNWRAEYIHLGRELGEIINEQQNIILKLQNENRHLKRENWNLKKTKGRKKWQV*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0037	shell	direct	high	188	0.995	GCA_013276815.1_00954
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	23290	23406	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	23291	23407	GCA_013276815_1_81_38	GCA_013276815_1_81_38	-	76198	.	.	hypothetical protein	MFDYDRDIMQPPEEREELDPSQYIYVGCGQYRYVGDEV*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0038	shell	direct	high	116	0.991	GCA_013276815.1_00955
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	23399	23542	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	23400	23543	GCA_013276815_1_81_39	GCA_013276815_1_81_39	-	76198	.	.	hypothetical protein	MTRIELENRVWLLANHEEKNELLDLGLTSKARYVKRVLELGKVYAHV*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0039	shell	direct	high	143	0.993	GCA_013276815.1_00956
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	23559	23906	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	23560	23907	GCA_013276815_1_81_40	GCA_013276815_1_81_40	-	76198	.	.	hypothetical protein	MFEPPLVSQLLGTGAVILGFIGAGLLAHQMDKQEEEKIRQKEEERREEQEFASMIIQGYNQAYERGREAQRQEIRKNIRREFKGFTYDNEPPQGLRPEPLALPEPRRSRYEKYLG*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0040	shell	direct	high	347	0.997	GCA_013276815.1_00957
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	23906	24163	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	23907	24164	GCA_013276815_1_81_41	GCA_013276815_1_81_41	-	76198	.	.	hypothetical protein	MINKDQIIKAQQEKIERIEQLQKKLHKLSTLGLLTTKLLGLPNELEKPLKVTHDISHVIKDVLDGMSPSEAIKQNMAEEDDEEEE*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0041	shell	direct	high	257	0.996	GCA_013276815.1_00958
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	24251	24517	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	24252	24518	GCA_013276815_1_81_42	GCA_013276815_1_81_42	-	76198	.	.	hypothetical protein	METVQIVRIKDVIIEKISANDEELEHIFGCSKRQAGDMRREMKKLPSQQKYLRNDGQLVTIKGFDAYLQYRGSQSWKKEMSKTVKMTR*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0042	shell	direct	high	266	0.996	GCA_013276815.1_00959
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	24636	24875	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	24637	24876	GCA_013276815_1_81_43	GCA_013276815_1_81_43	+	76198	.	.	hypothetical protein	MTEIHACLCGNWVNLSADDDCVMGPNMASPYIWWEENAELYSPISKPEANSMYHQDYIYIHYRGADYRIHPMFIQIVSR*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0043	shell	direct	high	239	0.996	GCA_013276815.1_00960
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	24868	25038	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	24869	25039	GCA_013276815_1_81_44	GCA_013276815_1_81_44	-	76198	.	.	hypothetical protein	MKEAVKEFLKFRSRFTKIEWFEINQAIEARLNQKADQLKLDDLDLEIISSRLEKVI*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0044	shell	direct	high	170	0.994	GCA_013276815.1_00961
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	25035	25178	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	25036	25179	GCA_013276815_1_81_45	GCA_013276815_1_81_45	-	76198	.	.	hypothetical protein	MEDKIIELADYFISESTTYREAKIACEKLFRQVSHEIELRAMESRTV*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0045	persistent	direct	high	143	0.993	GCA_013276815.1_00962
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	25295	25462	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	25296	25463	GCA_013276815_1_81_46	GCA_013276815_1_81_46	+	76198	.	pfam14168	YjzC-like protein. The YjzC-like protein family includes the B. subtilis YjzC protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length.	MANTPIKPGTDNQKPGRYVEVGPRGGKVTNGHTATIGKGDRLPPTSAKGNGWKKV*	mmseqs_cdd	nonviral_gene	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0046	shell	direct	high	167	0.994	GCA_013276815.1_00963
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	25459	25602	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	25460	25603	GCA_013276815_1_81_47	GCA_013276815_1_81_47	-	76198	.	.	hypothetical protein	MIHHYITHYASNGKDYAEAWIQIDFLGMCFCVWKKRTTIERLYANED*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0047	shell	direct	high	143	0.993	GCA_013276815.1_00964
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	25617	25742	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	25618	25743	GCA_013276815_1_81_48	GCA_013276815_1_81_48	-	76198	.	.	hypothetical protein	MRPRRYPYSGKRKKPINFQIDLEKFNRLSYEAIHDTSQVTQ*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0048	shell	direct	high	125	0.992	GCA_013276815.1_00965
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	25754	25972	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	25755	25973	GCA_013276815_1_81_49	GCA_013276815_1_81_49	-	76198	.	.	hypothetical protein	MRSNLAMTQSLDAPCQQVTIKERQQIIEQFEEKHYGLSSLLKERLLITSDYQFTRKMNELRAFARNGGIYTS*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0049	shell	direct	high	218	0.995	GCA_013276815.1_00966
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	25911	26765	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	25912	26766	GCA_013276815_1_81_50	GCA_013276815_1_81_50	-	76198	.	PDB:4M4W_K	Replicative-helicase	MRAVSRDELQGRFLQIETLNTQCPKHEGVYMWRSVNPCTQNVLTYCPECGQEKIHSQAGEQLAQAEAQIRNTRSYSLFAKESIIPPDLKNATIGSFEIHTDQDAEAVNFAKRVTVDYVKERYEGNTIISGPPGVGKSHLAIGIAKTLNESFQKFQLKRSVVYIPSMELFSRMKDAFRYKDSKWEERRTIQFLQKVDYLILDDLGKESSVGDEIKQGNNWMQKVLYQILENRTNTIITTNYGGNHLEKLYEKSLVDRITKGNMKTNAFKFSNDTESRRTLSASDY*	rep_hall_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0050	shell	direct	high	854	0.999	GCA_013276815.1_00967
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	26775	27617	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	26776	27618	GCA_013276815_1_81_51	GCA_013276815_1_81_51	-	76198	.	PFAM:PF09681.9	phage-replisome-organiser	MVIQKDDIEDFLDFIKIPVVLIKDKAFSELSMEAKVLYSIMKDRLKLSLKNNWIDEKGAYIHLSIEELQKDYFVQLSKPTIIKRKKELVDFGLIELKKQFNKSDKIYVNRLSSYISKNSLPTEVKNFDHISKNSLPTEVKNFDSNQSYINQSYINRITEPDGAGANNLYSIEDAPENDLGIVHDWIFSEFGRYPTPFEIEDLKYFLQDHSKEVIKLAIKECVGNGKPYFKYLESILRDWKQKGLVTAELVENRQRPKRSSGKPSSELRLSDDGYNPRLGF*	rep_hall_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0051	shell	direct	high	842	0.999	GCA_013276815.1_00968
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	27657	27869	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	27658	27870	GCA_013276815_1_81_52	GCA_013276815_1_81_52	-	76198	.	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain  [Transcription]. 	MQKISLKMARIKTGMTQEEIAKKLGISRNTYMDYERYDTPMRITTAIDFCRIVDIPLDEIFFEKNYTSSV*	mmseqs_cdd	nonviral_gene	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0052	shell	direct	high	212	0.995	GCA_013276815.1_00969
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	27882	28103	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	27883	28104	GCA_013276815_1_81_53	GCA_013276815_1_81_53	-	76198	.	PFAM:PF13744.5	transcriptional-repressor	MCLKSTTYGVFLMWDKIEKQLKIKGWSMYRLAKESGVHPSNFSNLKAGRMKEMSWTNMCKIADALEVSLDELR*	phrogs_hmm	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0053	shell	direct	moderate	141	0.635	GCA_013276815.1_00970
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	28216	28434	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	28217	28435	GCA_013276815_1_81_54	GCA_013276815_1_81_54	+	76198	.	.	hypothetical protein	MSRLQPRPQKNYPNYNWDDLDRFIQDILSDPSFKVCCVDPALYAIPKDEIIAECISAGYTVEEREDGILNIS*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0054	shell	direct	high	218	0.995	GCA_013276815.1_00971
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	28605	29315	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	28606	29316	GCA_013276815_1_81_55	GCA_013276815_1_81_55	+	76198	.	PFAM:PF13643.5	DNA-binding-protein	MSFDLSKLSLGSRFAGNSKAFQCPVCSGFSSHLWTYNPIDINRDYKESIKFIIIAQCQACNQFSIWITNEIQITYGSRIVLNTSDATSTLIFPNVAEGVPKPNNDMPDDVKEIYIEAGEVLNISPRASAALSRLAIEKLVAHLNAQGKDLNTQIGSLVSKGMPIEIQQMLDSVRVIGNNAVHPGQIDIKDNKELALSLLSFINLIVDNRITQPKKILDIYNLLPDSYRNSIERRDN*	phrogs_hmm	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0055	shell	direct	high	710	0.999	GCA_013276815.1_00972
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	29312	29443	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	29313	29444	GCA_013276815_1_81_56	GCA_013276815_1_81_56	-	76198	.	.	hypothetical protein	MESVEIVELIKITFKRGKGTEDDPVRVVTQYWDKENVLIFEKD*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0056	shell	direct	high	131	0.992	GCA_013276815.1_00973
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	29613	29756	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	29614	29757	GCA_013276815_1_81_57	GCA_013276815_1_81_57	-	76198	.	.	hypothetical protein	MMEHIIKSLATKDTTTVILVLGLVNEARLWHKQYLAYKLKDKELKKK*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0057	shell	direct	high	143	0.993	GCA_013276815.1_00974
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	29829	30104	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	29830	30105	GCA_013276815_1_81_58	GCA_013276815_1_81_58	-	76198	.	.	hypothetical protein	MNTLNEKAINIFKAVAKETLIQGTYEGNFLYSQLETFCTNCRQFAFGWTELAEEIERQERYLLDAGFTQEEIDDIRFDAAFAGMLDKMNVA*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0058	shell	direct	high	275	0.996	GCA_013276815.1_00975
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	30273	31031	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	30274	31032	GCA_013276815_1_81_59	GCA_013276815_1_81_59	+	76198	.	PDB:2FJR_A	Repressor-protein-CI	MDSLAQNIKYYRKLSGLTQKELAKKLSVAPTAISAWEVGRNQPLMNNIEQMSAIFGIKKSLLLGEDFSSHVDKATSPIQTIYDELKPPRQAKVLNYAKRQLDEQKNEEETKINEVSEKVIDLYQVEVVSETAAASGFNYGFGYDDTDREIIEVDEQPPHHDIATKVSGDSMQPDYQDGDILYLVDKGLTTYNGDLAVIAYGDRSYFKKIYTENGRLRLVSLNDKYEDITLDFPPAEDTHIKIYAVIGVYRGE*	common_virus_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0059	shell	direct	high	758	0.999	GCA_013276815.1_00976
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	31032	31796	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	31033	31797	GCA_013276815_1_81_60	GCA_013276815_1_81_60	+	76198	.	PFAM:PF02452.16	antitoxin-mazE-like	MTIQNKQILKASKNFEKVHSTFKNNNKFRFLPNWLEKESNLFLSETQNTSKSYNVLKRGSLIFVDFGINIGSELSNRHWAVVLNKNDSPKSRNLTVLPISSKEKKFSVMIDEVIQQKSKRFLLPILDKIGFDYFSIIHYALTEITPFDLGSAEEIYQEFLIQYGDAYNSESAKEIYDNGAGMEKVENTNRKLKDLVNHYQRFNKISYAKCDQIKTISKDRIIYINELDPCGKIKVSDETLDRIDEKLKELYLKN*	phrogs_hmm	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0060	shell	direct	high	764	0.999	GCA_013276815.1_00977
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	32246	32365	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	32247	32366	GCA_013276815_1_81_61	GCA_013276815_1_81_61	-	76198	.	.	hypothetical protein	MPFTILDILTLRVAKLCECGDFFELFPKWKQLAARQIIK*	.	hypothetical_protein	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0061	.	unmatched_CDS	none	0	0	.
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	32417	33544	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	32418	33545	GCA_013276815_1_81_62	GCA_013276815_1_81_62	+	76198	.	PDB:1Z19_B	Integrase	MWMEELPNGKYKFFERYKDPYTEKLKKVSVTMEKKTPQARNQAAILLQEKINKKLSTKQVESITFEEIYNLFYKSWAQTVKESTKHNCKSVDKKMKEIIPSDTILANLDRRFLQEAIEKIIESNGYITAKKVRHRLRGIFNYAVQYSYIENNEVDYTTIPQKPKTLEELEKKRNNFLTMQEIKALIDVLNRREYHQKYADMVLVLALTGMRYGELTALQLKNIDFENNKIEITGNFDSVNKIKTLPKTTNSIRTIKVSESVIEAIQRQIVRLSERFQPLSSDDYIFCFEKWNQPTTIACFIQILKKYGKQAKIEKNLSSHIFRHSHISFLAESGLPIKSIMDRVGHSNAKMTLEIYSHTTEDMEDKLVNKLDTIF*	common_virus_hmm	common_virus	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0062	shell	direct	high	1127	0.999	GCA_013276815.1_00979
GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote	cenote	CDS	33632	34543	GCA_013276815.1	VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815.1_VMLT01000021.1	GCA_013276815.1|VMLT01000021.1	GCA_013276815_1_81	GCA_013276815_1_81@C0	33633	34544	GCA_013276815_1_81_63	GCA_013276815_1_81_63	-	76198	.	TIGR00647	DNA-binding protein WhiA. This family describes a DNA-binding protein widely conserved in Gram-positive bacteria, and occasionally occurring elsewhere, such as in Thermotoga. It is associated with cell division, and in sporulating organisms with sporulation. [Cellular processes, Cell division]	MSFTVAVKEEILGQHHLSRHELSAIIKMSGSIGLSTSGLTLSVVTENAKLARHLYESFLHFYEIKSEIRHHQRSNLRKNRVYTVFTDEKVQDLLSDLHLADSFFGLETGIDEAILSDEEAGRAYLCGAFLANGSIRDPESGKYQLEISSVYLDHAQGIASLLQQFLLDSKVLERKKGAVTYLQRAEDIMDFLIVIGAMKARDDFERVKILRETRNDLNRANNAETANIARTVSASMKTINNISKIKDIMGLENLPVDLQEVAQLRIQHPDYSIQQLADSLSTPLTKSGVNHRLRKINKIADEL*	mmseqs_cdd	nonviral_gene	C0	34544.0	0	34544	GCA_013276815.1|VMLT01000021.1@region_1_34544@tool_cenote_CDS_0063	persistent	direct	high	911	0.999	GCA_013276815.1_00980