core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	20201	20632	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	1	432	GCA_013276855_1_16_19	GCA_013276855_1_16_19	-	93536	.	COG5346	Uncharacterized membrane protein [Function unknown]. 	MDTENKDLIEVNNIVDEVERLPHEQRQVVLQKLEIYQGDLPHPDILKGYKELYPDAAQKIIDNGIAESQHRREMEDKYLSGNIASHKLGQLFGFLIALVVIIGGIYLIATDKQIAGSVLTGTTALGLIGLFTGNNQNKNKDKE*	mmseqs_cdd	nonviral_gene	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0001	persistent	direct	high	431	0.998	GCA_013276855.1_00413
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	20616	20822	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	416	622	GCA_013276855_1_16_20	GCA_013276855_1_16_20	-	93536	.	.	hypothetical protein	MLKNTKQPQYFKSFLLGMTAIVLPVFSFNQNISKVKADTVPDWKKVKSDYKKSTMGIQKEVMKFGYRE*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0002	persistent	direct	high	206	0.995	GCA_013276855.1_00414
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	20999	21955	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	799	1755	GCA_013276855_1_16_21	GCA_013276855_1_16_21	-	93536	.	COG5263	Glucan-binding domain (YG repeat)  [Carbohydrate transport and metabolism]. 	MDIDTSRLRTGLPQVGVQPYRQVHAHSTGNRNSTAQNEADYHYRKDPELGFFSHVVGNGRVMQVGPVNNGSWDVGGGWNAETYAAVELIESHSTKEEFMTDYRLYIELLRNLADEAGLPKTLDTDDLAGIKTHEYCTNNQPNNHSDHVDPYPYLASWGISREQFKQDIESGLTIETGWKKNDTGYWYVHSDGSYPKDKFEKINDTWYYFDGSGYMLANRWKKHTDGNWYWFDQSGEMATGWKKIAEKWYYFDVEGAMKTGWVKYKETWYYLDGKEGAMVSNAFVQSADGTGWYYLKPDGTMADKPEFTVEPDGLITTK*	mmseqs_cdd	nonviral_gene	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0003	persistent	direct	high	956	0.999	GCA_013276855.1_00415
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	21958	22287	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	1758	2087	GCA_013276855_1_16_22	GCA_013276855_1_16_22	-	93536	.	PFAM:PF09682.9	Phage-holin	MTQFNEFIIAFATGFLAVAVGSIVKMVKDYLLRKGGEKAVIIAEILAKNAVNAVEQVAAETGYKGDEKLAQARTKIRAELTKYKISMTDKDLDTFVESAVKQMNDAWRE*	common_virus_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0004	persistent	direct	high	329	0.997	GCA_013276855.1_00416
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	22302	22598	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	2102	2398	GCA_013276855_1_16_23	GCA_013276855_1_16_23	-	93536	.	.	hypothetical protein	MLGSREIVKRYIGDRLVWSSGPSLLLEVLNTRMWQYWGGYNIDIKGNDIKVAAIRYVQLNNSRLIRIQADMYNRGVIYLTGTNLREYIGTVNVKFYRE*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0005	shell	direct	high	296	0.997	GCA_013276855.1_00417
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	22628	23410	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	2428	3210	GCA_013276855_1_16_24	GCA_013276855_1_16_24	-	93536	.	6V8I_BM	Distal Tail Protein, gp58, Tail-Associated	MSNLENLARAIGEDVKAIKEDSELKDREVKKRLDTLESRPKVHPETLVTKAELEEKGYLTSHQDLSTYAQKWELYNDIPIKARISALENRPSFDTLTPTQRDSLKGDNGHSLNASVRIEGSYKNGSTSRLNLFADVFYDGEAVTSGYTLDYYYRGFGYTNWRSLRNQTPDSAGKFGTWSASQRSGGWFEVRIEVNYRGLRASAFTHLDNVNDGEQGRSGVPGQNIVNQNGSQALNYWAGTQEQYDAITTKDPHTIYDIFK*	hhsuite_tools	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0006	persistent	direct	high	782	0.999	GCA_013276855.1_00418
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	23416	23736	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	3216	3536	GCA_013276855_1_16_25	GCA_013276855_1_16_25	-	93536	.	PFAM:PF12789.6	tail-fiber-protein	MDTTKLTAFAQAVGEDNKKVNEELKTKVSTSDMNQAIAQAKSEVKAEILGEGTPENLDTLKEIAEKITSMGQDENSALLGKVTEVSGRVDQIANLDLVATYNAAKA*	phrogs_hmm	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0007	persistent	direct	high	320	0.997	GCA_013276855.1_00419
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	23743	24219	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	3543	4019	GCA_013276855_1_16_26	GCA_013276855_1_16_26	-	93536	.	PFAM:PF14606.5	neck-protein	MVCNLNMTNLRQIDGGHLIKQGDLASTFGFALLDEDYQVISSLEGEEALISLTKEGYQWKKQVTVTGQGVSFHLDAILPIGSYRLEITAGGYVFPSDKSVHIKIVASDKELVTEEVHALKELDIAKEVEKQLAGRTVGESPVGQELPDLLFYYNLGKV*	phrogs_hmm	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0008	persistent	direct	high	476	0.998	GCA_013276855.1_00420
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	24235	24513	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	4035	4313	GCA_013276855_1_16_27	GCA_013276855_1_16_27	-	93536	.	PFAM:PF04531.12	holin	MTEIEHLLIRFLFSLIPVVVLYFSMKDRATKQENRMTAIEKDIENLREFRMSANKRLDNHDEQNKAILVLAEQVKSLGEDVRELKTLIQSKQ*	phrogs_hmm	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0009	persistent	direct	high	278	0.996	GCA_013276855.1_00421
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	24524	24676	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	4324	4476	GCA_013276855_1_16_28	GCA_013276855_1_16_28	-	93536	.	.	hypothetical protein	MSKITLDQAKIDMYINLLERGAVDFSWVHKRWKDRVRKELKRRGLSHLAN*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0010	persistent	direct	high	152	0.993	GCA_013276855.1_00422
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	24669	25202	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	4469	5002	GCA_013276855_1_16_29	GCA_013276855_1_16_29	-	93536	.	PF07104.11	Protein of unknown function (DUF1366)	MNYEVAINPYLKGGENVTVVAIKMENKGRYSYEQCELPGDHTQDSEDALIQAVLELVRTELDPTSAIVKNQEQLAKTTEALERANQLMDGMQKVNLQNAQDIEDILARLEELEAQGESDQEETDEDTPQVTDTENQAEEAQPTPAVEDKKESEKEDDISETTNQESPSEDNGGSSNE*	hhsuite_tools	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0011	persistent	direct	high	533	0.998	GCA_013276855.1_00423
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	25199	25405	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	4999	5205	GCA_013276855_1_16_30	GCA_013276855_1_16_30	-	93536	.	.	hypothetical protein	MDNHTIDKLVAESLVDRLADIELNYAHLNVHHRLALAELQAFKAVLEYDPALKELFDETQAKMKGNKE*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0012	shell	direct	high	206	0.995	GCA_013276855.1_00424
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	25398	29978	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	5198	9778	GCA_013276855_1_16_31	GCA_013276855_1_16_31	-	93536	.	PDB:3GUD_A	Neck-appendage-protein	MIYLTEGNRPLNEAYNDEIVHFGNNTYQLTFRFPTSDPKWELLKEETFLTADDLHGEQDFYIFEVEKQQGYIQVYANQVISLLNNYIVSSIEVDRVSGTRVLSAFAGSITRANPFSFFSDIDDRHTLNIKDKNAMEVLAKDKHSILGQWGGDMVRNGYNLRLLKNGGSENESLFMYKKNLSSYQHKTSTKSLKTRITFKTTVKGEGEKAVDHDYMVVIDSPLLGNYSQIYEDVVEVNDQDVTDEASLIAYGKQYFRTSMCDMLEDNLEISVVGQSDVAVQMFDVVSIYHEWYGLDVRKKITKYTYSPMAKRLKSIGFGTFQSSLANAIGGIVNDAVLNESRNLHQIFEERLKKEIANADRAFDAEFTKREKAITDAIELAKAKAEEVKQEVSDTINQRFNSFHDEPLRESRRKAEEALKQAGASSSLAQEAKRIGLDSVARLEAFKSQTRSAQTALSGDLNLLKQTVTNDISSKQRQLKTDISKQVQALGQIKNDLAGVRSSQARYEETTKGRLTALTNRMEGKANKSEVRQTAETLTSQIDRIQEESSTRISTMTSRFNQRADALDAGVRRLTEGLRTKADISSLNVTAENIRQSVRRLERDTQSQLNQKLSTAEFEVRAGSIRQEILNATKDKADKTLVVAEAGKLREEFSNMQVGGRNYYRDSEKIQQSRFGFVFDNLDPYLSKSDIGTTWTLSFDYKLDEVDGSFPFHMMHNGGNGFGIEGQKKSTATREWQRFRLTGPVFFKEDAPSESKLQMTLFNSDLGYGGTIFIRRIKLEKGTLATDWSPALEDTNGLITQAKASFERTAQELRTDLSAVQAYVAQDGQRQESLQRYTREESARQARAVREQISRDYVGKSSYQEDVEGIHRRIEGVKTSANREITSQIASYRQSADGTFRDISSQITTYKQDMTRNIANLSHQLAGKVETTDFQRVKETSELYERILGNTENGIADKVARMAMTNQLFQVEVGKYSVSGPNLIKNSDFKNDTNKWGSTQNLGRLVKHSFYHNGQKDLMRLSNATKNKNFLSSHRFNLERNTDYVLNFRGFNNSALASYDVYILGRRAGESDGFTIFKKVVSSKKLSTSRCEDVSVTFNSGEMDNAYIRFENNGSSSGTADLYITEVDLYKGYKPRTWQPHPEDAVADANKKLEATQTKMTQLAGSWLVQNINSAGDLISGINLGANGHNRLSGKLTHITGETLIDRAVIKSAMVDKLKTANFESGSVTTAVLAAEAVTADKVKFDHAFIQKLIANDAFIGELTSKRIFATKIESVVNRSTFLEAYQGQIGGFTIGRFAQGRGRWISGVNQFSVGMGNGEGGSYNGENTAFWANWGYSWNSPGPNAWYVTTLGNMHCRNGANFHGRVDFSNSSRANFYGNTTFSRSPVFLNGIELGSKDVFGDGWNPKGGRNAVVWWNQVGSGSVKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIESKKHEEIGLIAQEAETIVPRIVSQDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMENRHG*	hallmark_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0013	shell	direct	high	4580	1.0	GCA_013276855.1_00425
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	29975	30673	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	9775	10473	GCA_013276855_1_16_32	GCA_013276855_1_16_32	-	93536	.	PDB:2X8K_A	Distal-Tail-Protein	MFYMIINGFNTSTIPHCVVTDFGQVEAAKPRVAEDANLYGANGSYRVLDGGYESYERTFSFYIPKLLDVSTIVEKFQPKDNVLEFSYQLGSVFYADFIGATYSPHGMHAWKLELKLSMQPFRYQKNLAPLIFTASGNINNPGSVYSEPVIEIEGDGDISLTIGRTTMNLTVRRKVTIDCRHKKQNIYNADGAVQNTLRKRGGFFELAVGNNGLVFTGAVRKVTVRPNWRYIL*	hallmark_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0014	persistent	direct	high	698	0.999	GCA_013276855.1_00426
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	30673	33084	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	10473	12884	GCA_013276855_1_16_33	GCA_013276855_1_16_33	-	93536	.	UniProtKB:R2PRN9_9ENTE	tail-tape-measure-protein-	MATELGKAYVQIIPSAKGISGMIQKEMGGEVASAGVSAGESLGSKMIGAVSGIIAAAGIGKAIGASINEGAALQQSLGGVETLFKDSADKVKGFANEAYKTTGLSANAYMENVTGFSASLLQSLGGDTDKAAETANMAMIDMSDNANKMGTSMESIQLAYQGFAKQNYTMLDNLKLGYGGTKQEMQRLLSDAEKLTGVKYDMNNLSDVYSAIHAIQENLDITGTTAREAATTFTGSFESMKAAAQNVLGKLSLGEDIQPALQSLLETTSTFLFGNLIPMIGNILKQIPNLILGGIKGVFSGIFGEGLGSIMGGIVTALGSAFLAFKAFSAVTGLLSGIPAILTTIKTAVTGLFTAMSANPIGIAIAAIAALTAGLVYFFTQTEMGRQIWQGFMDWFSGVWQSVAPVLTEVWNGIVETATTVWNNMMAVVAPIIQAVVDFIRSVWDGISLWWTENQGLIQQTFTTVWNAIQTVIQTVMPIIQSIIETAMNILAPFIETTWNNICTVVTTVWELIKIAIQTAMDVIGGIIKAVMAIINGDWGTAWNAIKGVGEAIWKGLSAAGKAIFDGFAQILSNIWNTIKSVASSAWEGLKSTVLGLIDELVQGAKKAWESMKQGVRDLVSNVTSIFDGIRNIDLWSAGKAILDGFLGGLKSAWGAVTDFVGGIASWIRDHKGPIEYDRKLLIPAGNAIMQGLNRGLQDRFKGVKKSVSGMAGEISSAFSNDNFGLSGTPTIAKNIEASLAMPSAQLEAKDSQTVSEIAILRASMEKILTAILEKPSDTYLDADKISMSVYQRQGAIYAREGM*	hallmark_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0015	shell	direct	high	2411	1.0	GCA_013276855.1_00427
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	33084	33470	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	12884	13270	GCA_013276855_1_16_34	GCA_013276855_1_16_34	-	93536	.	pfam17318	Family of unknown function (DUF5361). This is a family of unknown function found in Bacteria.	MMNLDEDALICDLAETYQIYDYKQLPLNEVAVFAYGLRDDSRIKQIMSDQIVSLEITLLANIVDRLSISLWLQTKDGQKGVNRPASIAELLTKNHKEESDERDYLVFESGEDFENYRKALLAKTGGDE*	mmseqs_cdd	nonviral_gene	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0016	shell	direct	high	386	0.997	GCA_013276855.1_00428
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	33482	33757	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	13282	13557	GCA_013276855_1_16_35	GCA_013276855_1_16_35	-	93536	.	.	hypothetical protein	MSKTFKGETKLGFKFEISERRLNNYELLELIGEVDEGQGQVFPKVVKLLFGDEQAKAFKDHLREEDGIVPNDKMADEIKSVFESVNGLKKS*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0017	shell	direct	high	275	0.996	GCA_013276855.1_00429
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	33763	34386	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	13563	14186	GCA_013276855_1_16_36	GCA_013276855_1_16_36	-	93536	.	UniProtKB:F8S0S2_9CAUD	tail-protein-	MAPELEETEVRTPNAESTGGKNMTTASASNVTAAKPKIGGAVSTAPAGTDLPTNAKTTLNPAFKTLGYISEDGLTNENSPESEEVKAWGGQTVLSSQTKKKDTFKYKLIEGLNIEVLKEVYGPDNVSGTLETGITVTANGKELPEHRLVIDTLLKNGCVKRVVIPRGKVSQIGEINYKDGEPIGYDLTITALPDNSENTHYEYIQGA*	hallmark_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0018	shell	direct	high	623	0.998	GCA_013276855.1_00430
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	34402	34737	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	14202	14537	GCA_013276855_1_16_37	GCA_013276855_1_16_37	-	93536	.	PDB:2LFP_A	tail-completion-protein	MIELVIKKFLDGQLDVPSFFEHKPNMPESYVILEKTGSGGSDYVHSATFAFQSYAPSLQKAAELNEKVKKVVEDLITVNEFSGVHHNSDYNFTDTETKQYRYQAVYDINYF*	hallmark_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0019	shell	direct	high	335	0.997	GCA_013276855.1_00431
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	34734	34970	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	14534	14770	GCA_013276855_1_16_38	GCA_013276855_1_16_38	-	93536	.	Uniprot:A0A0C5ADH8_9CAUD	type-I-neck-protein	MSDMKFQLNSAGVSALLRSSEMQGILREKGQGIAERAGEGFELTVSPGQKRANAKISTTDIKSMARNKKHNILLKAMR*	hallmark_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0020	shell	direct	high	236	0.996	GCA_013276855.1_00432
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	34963	35301	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	14763	15101	GCA_013276855_1_16_39	GCA_013276855_1_16_39	-	93536	.	PFAM:PF10665.8	Minor-capsid-protein	MTYLKGIPVILVDKVEIGNDDFGHPIHRDVEIEVQNVLVAPTSSEDVINQMNLTGKKAEYTLGIPKGDTNKWENREVKFFGRKWRTIGIPQEGIESMIPLSWNRKVMVEVYE*	hallmark_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0021	shell	direct	high	338	0.997	GCA_013276855.1_00433
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	35246	35686	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	15046	15486	GCA_013276855_1_16_40	GCA_013276855_1_16_40	-	93536	.	PFAM:PF09355.9	head-to-tail-adaptor	MGNFAKIEDLELLWRSLKFDERARAEALLEVVSNSLRVEAEKVGKDLDDMVAESVSFASVAKSVTVDIVARTLMTSTDHEPMTQVAESALGYSFSGSYLVPGGGLFIKDTELKRLGLKKKQRYGAIEIYDLPKRNPCHFSGQGRNW*	hallmark_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0022	shell	direct	high	440	0.998	GCA_013276855.1_00434
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	35690	35902	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	15490	15702	GCA_013276855_1_16_41	GCA_013276855_1_16_41	-	93536	.	cd12935	LEM-like domain of lamina-associated polypeptide 2 (LAP2) and similar proteins. LAP2, also termed thymopoietin (TP), or thymopoietin-related peptide (TPRP), is composed of isoform alpha and isoforms beta/gamma and may be involved in chromatin organization and postmitotic reassembly. Some of the LAP2 isoforms are inner nuclear membrane proteins that can bind to nuclear lamins and chromatin, while others are nonmembrane nuclear polypeptides. All LAP2 isoforms contain an N-terminal lamina-associated polypeptide-Emerin-MAN1 (LEM)-domain that is connected to a highly divergent LEM-like domain by an unstructured linker. Both LEM and LEM-like domains share the same structural fold, mainly composed of two large parallel alpha helices. However, their biochemical nature of the solvent-accessible residues is completely different, which indicates the two domains may target different protein surfaces. The LEM domain is responsible for the interaction with the nonspecific DNA binding protein barrier-to-autointegration factor (BAF), and the LEM-like domain is involved in chromosome binding. The family also includes the yeast helix-extension-helix domain-containing proteins, Heh1p (formerly called Src1p) and Heh2p, and their uncharacterized homologs found mainly in fungi and several in bacteria. Heh1p and Heh2p are inner nuclear membrane proteins that might interact with nuclear pore complexes (NPCs). Heh1p is involved in mitosis. It functions at the interface between subtelomeric gene expression and transcription export (TREX)-dependent messenger RNA export through NPCs. The function of Heh2p remains ill-defined. Both Heh1p and Heh2p contain a LEM-like domain (also termed HeH domain), but lack a LEM domain.	MTLYRDTKTGVIISAESVLGGDWVPVEKQVIEEEHLTVVELKSSLDELGIHYEKNAKKSELLSLYKSHKG*	mmseqs_cdd	nonviral_gene	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0023	shell	direct	high	212	0.995	GCA_013276855.1_00435
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	35907	36803	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	15707	16603	GCA_013276855_1_16_42	GCA_013276855_1_16_42	-	93536	.	PDB:3JB5_B	Major-Capsid-protein	MADNAMKAGTLFKPELVTELISKVQGKSVLAKLSAQTPIPFNGVEQFIFNLEGNAQIVGEGEQKLGNKAKLTSKIIKPLKFVYQARITDEFKYASEEKQMNFLSAYMDGFAKKIAEAFDLAALHGLEPKTMTDASFRATNSFDGVISGSVVTYDEAKIDENLEDAVQQVIARGCEVTGIALSPIAGQALAKVKVNDVVQYPEFRFGQNPDSFYGMKSDINKNLTVTGGSAETDHAIVGDFQNRFKWGYAENIPMEIIEYGDPDGAGRDLKAYNEICLRAEAFIGWGILDEDAFARVKA*	hallmark_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0024	shell	direct	high	896	0.999	GCA_013276855.1_00436
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	36809	37279	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	16609	17079	GCA_013276855_1_16_43	GCA_013276855_1_16_43	-	93536	.	PDB:6B0X_d	Major-Capsid-protein	MKMSEFKTIETQEELDNIVKERIRREREKFGDYDELKKRVSELESENGALKATVEETKQTIAESDAQITELQGQVSNYETASLRTRIALQNGLPYDLADRLQGADEEALKADAERLAGFMRPATPPAPLRDTEPPIGDDKTMQMKQMLRELQPKGE*	hallmark_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0025	shell	direct	moderate	465	0.987	GCA_013276855.1_00437
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	37355	38767	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	17155	18567	GCA_013276855_1_16_44	GCA_013276855_1_16_44	-	93536	.	PFAM:PF03354.14	Large-Terminase	MARKKLGNQNPTQSVILKYVKKNSKAKEAVEIYERTGLSCYAWQVNLLTSIMAVDKNGLWVHQKFGYSIPRRNGKSELLYLFELWGLHNGLNILHTAHRISTSHSSFEKVKRYLEKMGYVDGEHFSSIRAKGQERIELFDGGGIVQFRTRTSNGGLGEGFDLLVIDEAQEYTTEQESALKYTVTDSSNPITIMCGTPPTPVSNGTVFTNYRKTCLFGRGKYSGWAEWSVSEEKEIDDVEAWYNSNPSMGCHLNERKIEAELGDDKLDHNVQRLGYWPEYNQKSAISETEWNELCVDSMPDLSGKLFVGVKYGQDGANVALSIAVRTVDERIFVETIDCQSVRNGNDWILDFVKRADVATIVVDGASGQKILDEELKKERMKSVILPTVKEIIVANSMWEQGIYQKTLCHAGQPSLKKITTNCEKRNIGSNGGFGYRSHFADMDISLMDSALLAHWACVTTKPKKKQKISY*	hallmark_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0026	shell	direct	high	1412	0.999	GCA_013276855.1_00438
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	38818	39048	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	18618	18848	GCA_013276855_1_16_45	GCA_013276855_1_16_45	-	93536	.	.	hypothetical protein	MGNVIDFSEEKSSLERGASVKEILEENLEASHDYTSVLVVSLDKDGEINLGYSWDSSLQALGMLDVAKNYILNVIN*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0027	shell	direct	high	230	0.996	GCA_013276855.1_00439
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	39098	39262	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	18898	19062	GCA_013276855_1_16_46	GCA_013276855_1_16_46	-	93536	.	.	hypothetical protein	MIEIDERTGEVTVVIESNYDKELGYPYYANKARGAVKQMLDRGELPNEKSFAWG*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0028	shell	direct	high	164	0.994	GCA_013276855.1_00440
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	39356	39583	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	19156	19383	GCA_013276855_1_16_47	GCA_013276855_1_16_47	-	93536	.	.	hypothetical protein	MLKFNLIEVVNGFYRYEVFPEGDVSRREIFEFNPSTREVKRNDPPRYGFDYVSKCIINLKNADGSLKESGQVAWY*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0029	shell	direct	high	227	0.996	GCA_013276855.1_00441
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	39570	39785	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	19370	19585	GCA_013276855_1_16_48	GCA_013276855_1_16_48	-	93536	.	4A54_A	EDC3, MRNA DECAPPING COMPLEX SUBUNIT	MNLEQYLGKDIRVTFVDDQILEGHCNTFTGKQDTEDELYDEITIRTDKHPYVGFNESEIKSIELRKNNVKI*	hhsuite_tools	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0030	cloud	direct	high	215	0.995	GCA_013276855.1_00442
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	39785	40999	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	19585	20799	GCA_013276855_1_16_49	GCA_013276855_1_16_49	-	93536	.	pfam15542	Bacterial toxin 50. A predicted RNase toxin found in bacterial polymorphic toxin systems that is proposed to adopt the BECR (Barnase-EndoU-ColicinE5/D-RelE) fold, and contains two conserved histidine, a serine, two lysine, and a threonine residue and a HxVP motif. In bacterial polymorphic toxin systems, the toxin is usually exported by the type 2, type 6, type 7, and MuF-type secretion systems.	MVEDIVPSLLKKIKPEFEGARLDSEVLKDLLSKLHHSKASYLDANQYAIEIGEILSKALGASLTNETLPDGKMYYNIAQRVLTDVLGRNHELVSDYTEQIQKNLNSEAKIGLTAQVPELNQDRIDGLVNRLASEESFDDVKWLLDDPIVNFSQSIVDDSIRKNAEFHHKVGLHPTIERNSTGHCCDWCQSLVGKYLYGTEPSGFYRRHQRCRCTIDYHPKNGKQQNAWSKKIIKEASNEKERRKQQLIDIKDNFAADDKREYRSIVKVLGRKNAPKSVAKFRELKYNDVKEYEQLKDKVFIYQKIQTGEWGKKINPEKQLPHMESTHKAGKSYIYDSVDVQELFNKHHGTGRIELDRHGRRTNKEIIELGYPIGINGSDGSEVTSIKIHHSEKRTHIVPKKGDQ*	mmseqs_cdd	nonviral_gene	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0031	cloud	direct	high	1214	0.999	GCA_013276855.1_00443
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	40953	42257	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	20753	22057	GCA_013276855_1_16_50	GCA_013276855_1_16_50	-	93536	.	PDB:2JES_G	Portal-Protein	MTLKGMGYLRKKLANYKMGVDTRYKQYAMQHNEVDVGITIPPQIRQQYRAVLGWAAKGVDSLADRLVFREFANDEFGANEIFAQNNPDVFFDSAILSALIGSCCFVYISQGDDDDAPRLQVIEASNATGVLDPITGLLTEGYAVLKRDDNGYAVLEAYFTSDVTWFYPKDGKPFAIGNPTGVPLLVPVIHRPDAVRPFGRSRITRAGMYYQRYAKRTLERSDVTAEFYSFPQKYVLGLSQDAEAIDTWKATVSSLLTFTKDDEGDKPNVGQFTTSSMSPFTEQLRTAAAGFAGEMGLTLDDLGFVSDNPSSVEAIKASHENLRLAGRKAQRSLGSGLLNVAYVATCLRDEFPYLRKQFNKTVVKWEPLFEADANMLTLIGDGVIKLNQAVPGYMDAETIRDLTGIKGSDKPAPVVKEGADGGGYRSEPAQENQA*	hallmark_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0032	shell	direct	high	1304	0.999	GCA_013276855.1_00444
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	42449	42793	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	22249	22593	GCA_013276855_1_16_51	GCA_013276855_1_16_51	-	93536	.	pfam01844	HNH endonuclease. His-Asn-His (HNH) proteins are a very common family of small nucleic acid-binding proteins that are generally associated with endonuclease activity.	MNTIPLRADRSGPHRVAFEKNKKIILKTRNTCGICGQPVDKDLRYPHPLSPVIDHIVPVNKNGHPSDIANLQLAHWQCNRQKSDKLYADEKTNGTKVIGNRNLPQSTDWFKYKS*	mmseqs_cdd	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0033	shell	direct	high	344	0.997	GCA_013276855.1_00445
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	43028	43594	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	22828	23394	GCA_013276855_1_16_52	GCA_013276855_1_16_52	-	93536	.	CDD:cd01192	site-specific-tyrosine-recombinase	MKKVEPIRDLDDIERMKNYLKSKSERNYILFLFGIYSGLRVSDIVPLQVKHVTQDRIEIKEKKTGKVRRFAVNPELRKALNRYIKENNLESYDYLFPSRKKVRGDGLRIKHIGRVAVYQFLNDAANHSGLEHIGTHSMRKTFGYHHYKQNGNIAILMQILNHSAPDITLDYIGYNQDEIDESMLTFTY*	common_virus_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0034	cloud	direct	high	566	0.998	GCA_013276855.1_00446
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	43728	44156	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	23528	23956	GCA_013276855_1_16_53	GCA_013276855_1_16_53	-	93536	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MQIELLDIIDEKKTRKEAIKVLKKYSRLRRIAGEEYAPKITISYSLEPKSSSGQTSKQVESMVLRRVSAQQDLELIAKAINNLSDMEYTRILIERYCRKKRREDYSIYSELGYSSSEYYRILNKALLEFAESYQASNLLVYK*	mmseqs_cdd	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0035	persistent	direct	high	428	0.998	GCA_013276855.1_00447
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	44228	44458	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	24028	24258	GCA_013276855_1_16_54	GCA_013276855_1_16_54	-	93536	.	PDB:2FJR_A	Repressor-protein-CI	MKDKLNPRQASRFAFLLKQKRKERKLSQEKLAAKLGYSRYLIAQWEKGESVPNIYNVEDICTYFAFPADIILGSRA*	common_virus_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0036	shell	direct	high	230	0.996	GCA_013276855.1_00448
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	44448	44627	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	24248	24427	GCA_013276855_1_16_55	GCA_013276855_1_16_55	-	93536	.	PFAM:PF04936.11	host-nuclease-inhibitor	MNEYALYQGETFVTIGTLEEISKETGIAERMLKYYTFASTQKRHPNGRAVVKIEVDDEG*	phrogs_hmm	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0037	shell	direct	high	179	0.994	GCA_013276855.1_00449
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	44620	44733	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	24420	24533	GCA_013276855_1_16_56	GCA_013276855_1_16_56	-	93536	.	PFAM:PF11753.7	kinase	MTDNINKPSHYQGANGLEDLKKARKNLDWLIEEMEHE*	phrogs_hmm	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0038	shell	direct	high	113	0.991	GCA_013276855.1_00450
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	44735	45283	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	24535	25083	GCA_013276855_1_16_57	GCA_013276855_1_16_57	-	93536	.	PFAM:PF13921.5	transcriptional-regulator,-D5-like	MALIIYMGRINIMAGRRWTEDEVDYILLAHNDNESTVEEVADFLGRTVSSVRCKSEIINKGKGQFTKRHWQDEEIRILRRYYQKVQDLNQLAKILNRSLDAVIIKANRLGLPRRKKKWDVSKYDIETLGKMGMSCRQIACQLDRPLRLIRAVVYHYKIPVGKEEIQQHPWSFDNDMIFMRRT*	phrogs_hmm	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0039	shell	direct	high	548	0.998	GCA_013276855.1_00451
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	45234	45413	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	25034	25213	GCA_013276855_1_16_58	GCA_013276855_1_16_58	-	93536	.	.	hypothetical protein	MPDVEWIMENCHMMRDNGIWAGEKQISYASPDGQYTYYVNKRKDGTYYLHGAYKHYGRT*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0040	shell	direct	high	179	0.994	GCA_013276855.1_00452
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	45406	45810	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	25206	25610	GCA_013276855_1_16_59	GCA_013276855_1_16_59	-	93536	.	TIGR01671	phage uncharacterized protein TIGR01671. This model represents an uncharacterized, well-conserved family of proteins found in bacteriophage and prophage regions of Gram-positive bacteria. [Mobile and extrachromosomal element functions, Prophage functions, Hypothetical proteins, Conserved]	MIPKFRGLSIDEKSKGEWQYGHLIEDRGRAFIINEVVEANEQYITIGSWCPVNPATLGQSTGLRDKNGKEVFIGDIVKCTRGCPHEVYLEKEYGGTFIGGMPAVYLKGLGEGYAWTEDEEIIGNVYENKEVLDA*	mmseqs_cdd	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0041	cloud	direct	high	404	0.998	GCA_013276855.1_00453
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	45807	46067	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	25607	25867	GCA_013276855_1_16_60	GCA_013276855_1_16_60	-	93536	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MKRFIAIWILLSAGLNIWQMDRIRELEEKKPMVIYKADNAGAEIFGKVVEKGRHGKLYTLTIRDYGVFVVTKDVYEKVKVGDEVML*	mmseqs_cdd	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0042	persistent	direct	high	260	0.996	GCA_013276855.1_00454
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	46236	46463	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	26036	26263	GCA_013276855_1_16_61	GCA_013276855_1_16_61	-	93536	.	.	hypothetical protein	MNIKALIKKYEAVECVVGIVSGKTILKTVLRDLKQLDEQKPVKVPQCVADWIEEARKACKDVAELFEVGRFSQGF*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0043	cloud	direct	high	227	0.996	GCA_013276855.1_00455
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	46465	46782	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	26265	26582	GCA_013276855_1_16_62	GCA_013276855_1_16_62	-	93536	.	.	hypothetical protein	MMEDLKQKVNEVYNWTVEDGKPQPPKQDLPQAVKDRADYFWEMAEDGMTFMGAMECIFADEKPTDYELGATKGWLPKSKEFDDWIGYSPSMAQVVIAVYLIYGGN*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0044	shell	direct	high	317	0.997	GCA_013276855.1_00456
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	46754	47086	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	26554	26886	GCA_013276855_1_16_63	GCA_013276855_1_16_63	-	93536	.	.	hypothetical protein	MKYKVTEYHSDFQEEQTGTCELCFGTAWVENGSITVEDENGTETEIYLTVWDWGDYDTIYIDNVVNFSAWLQEREVDQIVEETEPWSWLHELVEKYNEELEDDGRFKAKS*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0045	shell	direct	high	332	0.997	GCA_013276855.1_00457
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	47076	47267	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	26876	27067	GCA_013276855_1_16_64	GCA_013276855_1_16_64	-	93536	.	.	hypothetical protein	MNYDKQVVIEGLKRTIEQNEEKIIEYSKPCDARKRRIRALERDLLKKKNKELRKKVEELEDEI*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0046	shell	direct	high	191	0.995	GCA_013276855.1_00458
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	47254	47421	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	27054	27221	GCA_013276855_1_16_65	GCA_013276855_1_16_65	-	93536	.	.	hypothetical protein	MVGVTYQEIHLFVEFLKKQYGQGRPDYIEALNDLDGMVEVSYREAIERFLDDELR*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0047	persistent	direct	high	167	0.994	GCA_013276855.1_00459
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	47437	47832	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	27237	27632	GCA_013276855_1_16_66	GCA_013276855_1_16_66	-	93536	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MINNVTLVGRLTKDPELKYTPSNVAVATFTLAVNRNFKGANGEREADFINCMMWRKQAELFAEWCKKGNLVGVTGRIQTRNYENQEGRRVYLTEVVADGFERLEKRDDTANRSNIEEQMPGYALEEDDFPF*	common_virus_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0048	persistent	direct	high	395	0.997	GCA_013276855.1_00460
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	47825	47926	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	27625	27726	GCA_013276855_1_16_67	GCA_013276855_1_16_67	-	93536	.	PFAM:PF00436.24	single-strand-DNA-binding-protein	MIEFIKEFGITFLCFFIGYSVVECATGKEKKDD*	phrogs_hmm	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0049	shell	direct	high	101	0.99	GCA_013276855.1_00461
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	47919	48146	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	27719	27946	GCA_013276855_1_16_68	GCA_013276855_1_16_68	-	93536	.	.	hypothetical protein	MLELYFVYNGHCKFYLGMFDNVDDLIEQMEDHQWAFSAITQPRFQKHIGQRTTRFDYGTKDCYYLATFSGGEEND*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0050	shell	direct	high	227	0.996	GCA_013276855.1_00462
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	48146	48340	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	27946	28140	GCA_013276855_1_16_69	GCA_013276855_1_16_69	-	93536	.	.	hypothetical protein	MFILKHGTREDKPFLRSAVIGVTGLDISCSEEKKAMRFVSRGAAVQVGKALRGSFGNFYPVEVE*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0051	persistent	direct	high	194	0.995	GCA_013276855.1_00463
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	48355	49125	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	28155	28925	GCA_013276855_1_16_70	GCA_013276855_1_16_70	-	93536	.	PDB:4M4W_K	Replicative-helicase	MVDNVFEEIALSYHRNTEQQDEFCEKHNIPLIKILRTESVVCRMCESERIHEENQARVNELADAENERERKYYLEKFSLYDEVLKNATLDNFETPTEKEAEKLAFAKRICREWSEGARNNIVLQGEAGTGKSHLAFAMVKALSEYTKEIAIFINVTDLLMKIKADFSQEEFLVNKIASAKFLVLDDLGMEKDSEWSFTILYNILNKRSNTIITTNLTSADIQKRYGRPFMSRLMKGVDKDHLMVFNDLTNKRKHYF*	rep_hall_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0052	persistent	direct	high	770	0.999	GCA_013276855.1_00464
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	49119	49277	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	28919	29077	GCA_013276855_1_16_71	GCA_013276855_1_16_71	-	93536	.	.	hypothetical protein	MGILELIEQFEIDYYPLSYEKKTLLADQPIHQVVACLSEMASWHECGGRLSW*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0053	persistent	direct	high	158	0.994	GCA_013276855.1_00465
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	49265	50089	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	29065	29889	GCA_013276855_1_16_72	GCA_013276855_1_16_72	-	93536	.	PFAM:PF09681.9	replisome-organiser	MLGMSEIKWIKITTDIFDDEKICLIDALPDPDAILVIWFKILTLAGKHNSNGLLMMTDKVHYTDEMLATIFRRPLNTVRMAIGVFEQFGMIEIIDGIISLPNWEKHQNVDGMEKIKEQTRNRVAKYRKKQKNLALGNVTGNVTVTDGNALEEDKDKNKNRLDKDKNKKRITTTTTTSSGGQENILELFQSEFRRLLSGFEIEEINHLLNENDVDLVKEALKTAINSGKPNIKYIGGILRNWQMNNVTTVEQVRQSEKKNKDKKEEQEAKDEWGY*	rep_hall_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0054	persistent	direct	high	824	0.999	GCA_013276855.1_00466
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	50073	50369	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	29873	30169	GCA_013276855_1_16_73	GCA_013276855_1_16_73	-	93536	.	.	hypothetical protein	MEELIESLDNLIMIVKELEGRESTSRHFITTWENDYKNLLLVKEYLTDYKKLAKDYRDVELKNKLLKIEKMELEGRYIYEDMRMKYRANRRKWGARYV*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0055	shell	direct	high	296	0.997	GCA_013276855.1_00467
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	50385	50705	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	30185	30505	GCA_013276855_1_16_74	GCA_013276855_1_16_74	-	93536	.	.	hypothetical protein	MFEPPILDQLMGVGALLIGFAGLCRHIKLQEERKEKERREEQEFASMIIQVRNHAYERGREDKWQEIRKNIRREFKGFTYDNEPPVGLRPEPLALPEPKQSAIRLL*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0056	shell	direct	high	320	0.997	GCA_013276855.1_00468
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	50718	51008	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	30518	30808	GCA_013276855_1_16_75	GCA_013276855_1_16_75	-	93536	.	.	hypothetical protein	MEGITLQLRLDGESAELFTNQLLAFAEKQVKEQLENDRMPINQQALMEKFGFTHSYIKKLERKGLRFRKQGKYIMYDINDVYEILELEKEVRKLRA*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0057	persistent	direct	high	290	0.997	GCA_013276855.1_00469
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	51113	51256	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	30913	31056	GCA_013276855_1_16_76	GCA_013276855_1_16_76	-	93536	.	.	hypothetical protein	MEDKIIELADYFISESTTYREAKIACEKLFRQVSHEIELRALESKTV*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0058	persistent	direct	high	143	0.993	GCA_013276855.1_00470
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	51374	51598	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	31174	31398	GCA_013276855_1_16_77	GCA_013276855_1_16_77	+	93536	.	.	hypothetical protein	MSKLSHKPNHVVKKLTWENLDNILLSNFSESTTDKPSAVIQLSDFEMSKTEIIEEATAQGYQVIDNSDGYLKFL*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0059	shell	direct	high	224	0.996	GCA_013276855.1_00471
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	51561	51803	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	31361	31603	GCA_013276855_1_16_78	GCA_013276855_1_16_78	-	93536	.	.	hypothetical protein	MRPRRYPYSGKRKKQSDRQIAKLKRDIDVNRTNISSLKFVIETLSNHQIAKLKRDIDVNRTNISSLKFVIETLSNHQNYR*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0060	shell	direct	high	242	0.996	GCA_013276855.1_00472
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	51817	52530	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	31617	32330	GCA_013276855_1_16_79	GCA_013276855_1_16_79	-	93536	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MNEIFNFHGQEVRTLTIDDEPWFVGKDVADILGYAKPLDAISRHVDEDDSVKYGLTDNLGRTQNTIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIREDLDEDAFIALFTGQKKLREQQTTMLEDIDYLKSEQPIHPSYAQSLLKKRKARVVACLGGIDSPAYADKIFAQSVFRQAEIDFKDHFNISRYDLLPKKHADAALAYWMTWEPSTNTKMKIMELNAFSQA*	common_virus_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0061	shell	direct	high	713	0.999	GCA_013276855.1_00473
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	52580	52960	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	32380	32760	GCA_013276855_1_16_80	GCA_013276855_1_16_80	+	93536	.	pfam10711	Hypothetical protein (DUF2513). This family is found in bacteria. The function is not known.	MKLNPDCVRDILFVVEEYSTYSNDVSEDKLYEKLVPKYSQEELLYHVRQCEHSGLFLDVQHYFGGFSIQDLSPYGHQFINDIRQDNNWNRTKDIAKNVGSFSLDVLKDISSQVITNLISNQLGNKF*	mmseqs_cdd	nonviral_gene	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0062	cloud	direct	high	380	0.997	GCA_013276855.1_00474
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	52934	53074	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	32734	32874	GCA_013276855_1_16_81	GCA_013276855_1_16_81	-	93536	.	.	hypothetical protein	MNELKIREDGIYLNNQKLKGVQAIKTKSTVESHHATVYLKFIAKLI*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0063	cloud	direct	high	140	0.993	GCA_013276855.1_00475
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	53108	53269	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	32908	33069	GCA_013276855_1_16_82	GCA_013276855_1_16_82	-	93536	.	.	hypothetical protein	MGELVWFYFVVIINLIIGLATYYASKRDRKKRINEYKKIQDDELERIRNKFNL*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0064	cloud	direct	high	161	0.994	GCA_013276855.1_00476
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	53282	53479	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	33082	33279	GCA_013276855_1_16_83	GCA_013276855_1_16_83	-	93536	.	.	hypothetical protein	MEVFLYVVIVSAITSFLVTVMLLRGYSNRLTEMLENFFDNELQARKEIQKLTLDTMDRIANKKIH*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0065	shell	direct	high	197	0.995	GCA_013276855.1_00477
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	53489	53686	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	33289	33486	GCA_013276855_1_16_84	GCA_013276855_1_16_84	-	93536	.	.	hypothetical protein	MNNAAQKVTRIDRDAWEIATELANEYGVSICHIISESVRYCAENAEFKEMDVVVKRLVVGSKVLE*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0066	persistent	direct	high	197	0.995	GCA_013276855.1_00478
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	53698	53883	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	33498	33683	GCA_013276855_1_16_85	GCA_013276855_1_16_85	-	93536	.	PFAM:PF13744.5	transcriptional-repressor	MYGAKMRELRTAQKLGLRELAKRTLIDYTTLSRIENDLKAVTLSQAVVIAKALGCRVEDML*	phrogs_hmm	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0067	persistent	direct	moderate	171	0.919	GCA_013276855.1_00479
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	53992	54207	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	33792	34007	GCA_013276855_1_16_86	GCA_013276855_1_16_86	-	93536	.	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain  [Transcription]. 	MQMKLIQLRKERGLNQSDLAGVLGISTNNYGQKELDNRKFDIHEMFTIADYFNKDIGDIFTPLCPRNVDKQ*	mmseqs_cdd	nonviral_gene	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0068	cloud	direct	high	215	0.995	GCA_013276855.1_00480
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	54389	54514	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	34189	34314	GCA_013276855_1_16_87	GCA_013276855_1_16_87	-	93536	.	.	hypothetical protein	MRRRKKPEKATKKEPWLDGPKALVISTVVTASVELIKHFFK*	.	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0069	shell	direct	high	125	0.992	GCA_013276855.1_00481
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	54678	55502	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	34478	35302	GCA_013276855_1_16_88	GCA_013276855_1_16_88	+	93536	.	PDB:2FJR_A	Repressor-protein-CI	MNKEELALYIGNKIKEHRKINNWTQTDLAEKIGIGKTTIGNYEKGYRSPKKDTMFDIANVFGVSIDDLFPPIRKADTPTASPDLLTQQITDKVVQLTPDNKKIVLRTSEELLERQKANGEMYTEQNEEETKINEVSEVISLYQVEVVSETAAASGFNYGFGYDDTDRETIEVDEQPPRHDIATKVSGDSMQPDYQDGDILYLVDKGLTTYNGDLAVIAYGDRSYFKKIYTENGRLRLVSLNDKYEDITLDFPPAEDTHIKIYAVVGVYRGGATY*	common_virus_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0070	shell	direct	high	824	0.999	GCA_013276855.1_00482
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	55499	56389	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	35299	36189	GCA_013276855_1_16_89	GCA_013276855_1_16_89	+	93536	.	PFAM:PF07751.10	abortive-infection-resistance-protein	MSRQPKWNNRKLINHLASKDVTFNNISIGQAITFLDKNNYYYKLAAFRKNFKKKDGKYVDLDFSYLQDLASLDMKIRAILLNIAIDVEHFIKVELSRQINNNPQEDGYSILTEFKNSQYNKYYEFTKKKFRESRYQNAMFNKRKHDYPYWALLEHMDYGCLIKFVTFYYQKHGCKSLKKASELGDGARHIRNACAHNSVLLLNVFEKDDKLSNVNAVITTFAKQVDVIKYKNYKKVNDLISLLVLAKAYCSPAVLDYQKQAIDNFIVRCQRNQSAYAKNVELTKMMVVFKKIVDIL*	phrogs_hmm	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0071	shell	direct	high	890	0.999	GCA_013276855.1_00483
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	56677	57420	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	36477	37220	GCA_013276855_1_16_90	GCA_013276855_1_16_90	+	93536	.	PFAM:PF02452.16	antitoxin-mazE-like	MNKLEKNNLDKLTVSTDKMKQLTVENPNHFKTSRLGQSMTNYSNQLEREIQGKRRRNRVFPYGTLVYVDFGINFGSEFSAPHYAITLTKEDKKNRNTITVIPLTSKPGYDNLPLEFNLAEGLGLLTTQLIKAAEDKVENELVAHFGEYDDFDELIAKLDKEGRLDEKERAINLVQKLTDNVSLAGQRLEKYVSDLDKTTYAKLDSITTIDKVKIFKKINPLDGIGVAKILEPQMKILSDEIKARYLI*	phrogs_hmm	hypothetical_protein	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0072	shell	direct	high	743	0.999	GCA_013276855.1_00484
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	57717	58862	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	37517	38662	GCA_013276855_1_16_91	GCA_013276855_1_16_91	+	93536	.	PDB:1XO0_A	Recombinase	MIKKYITKKGETRYLFQTYLGIDPATGKEKRTTRRGFKTIKEAKAAERDLLLDVEENGFSNNEDFQNPTFAEVAELWLDSYKSTVKPTTYQNVKKKLDVMIDLYFTDMKIQQISVAYCQKVTIQLSNRYILYANYYSVISRIFKYATSIDIIKSNPLDKIIKPKNRPLKAKENYYTKQELTEFLKICKVDCKPVEYTFYHLLAFTGLRTGEAIGLIWSDVDFENKRLDISRTAVVVNKKQTVQDPKTKKSKRVITLDDETLNVLKFWKRQQIKEYFRASVPYKHDSNYIFTNSFGGWISPSAVKERLKRFFCEHKDVKKITPHGFRHTHASLLFEAGVTAKIISDRLGHNNVQTTLDMYTHINDNQRFEVVEQLMDFIRSS*	common_virus_hmm	common_virus	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0073	persistent	direct	high	1145	0.999	GCA_013276855.1_00485
GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote	cenote	CDS	58924	59649	GCA_013276855.1	VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855.1_VMLU01000018.1	GCA_013276855.1|VMLU01000018.1	GCA_013276855_1_16	GCA_013276855_1_16@C1	38724	39449	GCA_013276855_1_16_92	GCA_013276855_1_16_92	-	93536	.	PRK13145	L-ribulose-5-phosphate 4-epimerase; Provisional	MNQVINAMRKRVCDANQSLPKHGLVKFTWGNVSEVNRELGVIVIKPSGVDYDELTPENMVVTDLDGKILEGDLRPSSDLPTHVQLYKAWSEIGSVVHTHSTEAVGWAQAGRDIPFYGTTHADYFYGSIPCARSLTKDEVEVAYEKDTGLVIVEEFEHRGLNPVEVPGIVVRNHGPFTWGKNPENAVYHSVVLEEVSKMNRFTEQINPRVEPAPQYILEKHYQRKHGPNAYYGQIVHVFLIP*	mmseqs_cdd	nonviral_gene	C1	39449	20201	59650	GCA_013276855.1|VMLU01000018.1@region_20202_59650@tool_cenote_CDS_0074	shell	direct	high	725	0.999	GCA_013276855.1_00486