core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	1	1113	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	2	1114	GCA_013277295_1_66_1	GCA_013277295_1_66_1	-	20413	.	PFAM:PF07902.10	minor-structural-protein	MDALTRRQFDRAMFAKERTLAIRVGDYTSRDIKEASFEYGYIKGDTYKPGGTCAGSGKITFTSIITTFNKLDTLHPEIGLLVGDTYQWVKMGEYFINDIEIDRNRNTTTLELMDGMFKLNREYVTDLHFPAEVREVIQEICLKTGIELANDYFGISAMRYHVEQVPEGKKLSFRDMLSAMTQMIGMSCFFNREGKMEIRDLTESNITINADSYFLHGLTKSEIEYQIAGITCKTDKKPLTVGMKTGRSLELDNVFMTQSALNDLYYNLKNLTYYPYNLNYQGHLLLEVGQWVTIQTNKKETFKVPVLSQSFTFKGGLRGRISADSKAGNDTQYSYEGTITKQIKQQDGIEAKIQAQIEAADAAFDAEFTKR	common_virus_hmm	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	1118	1468	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	1119	1469	GCA_013277295_1_66_2	GCA_013277295_1_66_2	-	20413	.	.	hypothetical protein	MAQLTINGVAVKPPKSFQVGIQDIDGETGRNANGDMVRDRITTKRKLDCEWGMMTQGELSQLLHAVSSEFFEVSYPDPMDGQVTKTFYVGDRTAPSYSFTEKFKPWSGAKFNLVER*	.	hypothetical_protein	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0002	shell	direct	high	350	0.997	GCA_013277295.1_01323
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	1477	4503	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	1478	4504	GCA_013277295_1_66_3	GCA_013277295_1_66_3	-	20413	.	UniProtKB:A0A0R1V141_9LACO	minor-tail-protein-	MAMIESTEAFKKFANGQSWQQLDYQTQQQIRLMAILEQATAKYGDTLSNSVNGRISLFKSLMKDSALNLGNAMLPIINAIMPVLNSFAMVLKNVTAKLAEFIALMFNKKATVKDGVGGAVGDMGNAMKDAAGGAGDLADAVDDAGDSAGGLADNLGDSAKNAKKAAKELLGLLGFDEINILQKPKDDDAGGSGGGGKGGKGKGGGGGPFKDILPEVELTDMDNQFKSIFDGLGDKLKGLFDLFKKGFDAAFGPEGIERIKTALDQIAKTMGEIATDPRVVNAFNRMAEKIAYALGQVTGSIATIGLGIGVFLAESIANGLGRQKERITRALVALFDNIGNIAEAVGNIAQAFSSAFYDVITSTGAVRIGSAIVSTLLSLTSTIVEVGSKLAGSLFKGFEKVVVTSAPKISSVFQSLLDTVAPVFESIERSVNKFGDGLSRVYDEHVVPAINSIANAFNGLIDIIQILWENSWQPFAEFLSGVFGVSIEGISDLLGGGLLATLGLLADAIKLVADGFAVFSDWCKENKEPILALITAWQTINFLSWAEQAGGLAGAFELLSGKVSFIVSGIKNLGLALKALTFDKLVSFGETIYLNALYAKDFVVNSGKLIAELGKTALELGKSALAWGVHAAQMGLAAAAEIAQSIAAGVAAAATWALNGAIAVLTSPITLVIAAIAALIAIGVLLYQNWDTVVEFAKTAWQGLCDFISGICQSIGEFFSGLWTKLQEIFEPIGQWFGEKFQQAWDAISNTFSKLGSWFGDRWNESKDALAEANTWLGDKFKSGRDKVNSAFEKVGSWFGDRWNDIKDGVKEADTWFGEKFESAKKKTQNPFQKIGSWFGDRWKNMQDALKEIPNWFKNLFNDAMDNAKNIVKSGIDKLKSFFNFDWSLPKIKLPHFNISGSFSLMPPRIPSFSVDWYARGGVFNSPSIIGVGEAGQEAVMPLERNTGWISILAQKLAERMPANNVPTGYSLPAGDIVIQIAGHEFGRVAIQEINKEHERAGQTLLKI*	hallmark_hmm	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0003	shell	direct	high	3021	0.998	GCA_013277295.1_01324
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	4805	5368	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	4806	5369	GCA_013277295_1_66_4	GCA_013277295_1_66_4	-	20413	.	PFAM:PF04582.11	tail-length-tape-measure-protein	MATLDELKVMIDAEIAPFRKKMKEVENQVKGTSDQVKNATAKIREQSSSIGSAFGKLAKFAGFAILGKKLLDVGMYSTQTALEVSAAMNQIKRQMGESSQSFLKWVNDNANAMNMGVGEATNYGAVYSNLFSGFIKDTNKLSAYTAKMLQTSAVVAEGSGRTITDVMERIRSGLLGNTEAIDFCRTA*	phrogs_hmm	hypothetical_protein	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0004	shell	direct	high	563	0.998	GCA_013277295.1_01325
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	5355	5699	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	5356	5700	GCA_013277295_1_66_5	GCA_013277295_1_66_5	-	20413	.	.	hypothetical protein	MDIGGKPLDFWDLTVLEIREMIESYNRVKIQERKEKIIDSYRLSQMISNHVSLLLSKDAKVFEFWEYAPELFVEEQQAVEQERQRQALLLHKERMRDFADRHNRKRKEEMNGNS*	.	hypothetical_protein	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0005	shell	direct	high	344	0.997	GCA_013277295.1_01326
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	5743	6123	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	5744	6124	GCA_013277295_1_66_6	GCA_013277295_1_66_6	-	20413	.	PFAM:PF12363.7	tail-assembly-chaperone-protein	MALPYSIWKISDEKELKLRLSSHQAAKVEEKIGMNLLKIFMPEAGEEFPLPPLKVVLLLIHGALQKYENGYSLEDVYDLYDEYVDNGGDQTTFMTEVLMPLFEVSGFTPRGSKGKKTSKKKMTVVE*	hallmark_hmm	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0006	shell	direct	high	380	0.997	GCA_013277295.1_01327
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	6128	6541	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	6129	6542	GCA_013277295_1_66_7	GCA_013277295_1_66_7	-	20413	.	PFAM:PF16463.4	tail-tube-protein	MLANGITLSYSETKGSYTKLVGLKEVPEFGIEPEKVENTTLEDKVKKYEFGIGDAGELEYKFSYNNSSETAPYRVLRKAADDKKKLYFEQAYPDGTKVNFEGQVSVKLGGGGVNAVIEFTLKIALQSELEFTDGLGG*	hallmark_hmm	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0007	shell	direct	high	413	0.998	GCA_013277295.1_01328
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	6544	6912	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	6545	6913	GCA_013277295_1_66_8	GCA_013277295_1_66_8	-	20413	.	PFAM:PF05657.10	tail-component	MINIKPVIYKELQKVADNVTDTYPSDWETFPVVIFLEEQNKPGDWFDDQEQKSSIRYKVDIFDDTSTSELAVKINQIFESLGLRRTDCQDVPDPSHLRHKVMRFEGVVDLHSELVFQFRMEN*	hallmark_hmm	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0008	shell	direct	high	368	0.997	GCA_013277295.1_01329
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	6909	7424	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	6910	7425	GCA_013277295_1_66_9	GCA_013277295_1_66_9	-	20413	.	PFAM:PF04883.11	putative-tail-component	MSELRGADRLIAKCRRLASKKTGEDIVLRAVHNAAIKVVQADAKRLAPGNNGELRNSIKTRVKMDGDKAIGEVYTNLHYAPYVEFGTGPKGQASHSGISPEVSVTYRSSPWYVHEDQINVGPYHFQKIGEFYKMYGQPAQPYLYPALRDNQERVSKNISDYVRRKIREQIK*	hallmark_hmm	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0009	shell	direct	high	515	0.998	GCA_013277295.1_01330
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	7399	7737	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	7400	7738	GCA_013277295_1_66_10	GCA_013277295_1_66_10	-	20413	.	PDB:2KX4_A	head-closure-knob	MFLKQSRLKPYPMRRFEKTVTEEGVVKEGYAKEAETVRLELWPASSKLQSEMYGERVNDILNANANKSATIKVKDGVCIDSPTEVTHRVISKKVYTYHQVLELERVRATRGR*	hallmark_hmm	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0010	shell	direct	high	338	0.997	GCA_013277295.1_01331
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	7718	8029	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	7719	8030	GCA_013277295_1_66_11	GCA_013277295_1_66_11	-	20413	.	PFAM:PF05135.12	head-tail-adaptor	MSIELLKKMTGEEDTQLLMLLQTRATNLILSEANRTSLTPALSRLIPEVAIELHNRSGAEGEHSRTEGGIAVVYGENGLSTGLLQRIRMHRLARVAGHVFEAE*	phrogs_hmm	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0011	shell	direct	high	311	0.997	GCA_013277295.1_01332
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	8031	8219	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	8032	8220	GCA_013277295_1_66_12	GCA_013277295_1_66_12	-	20413	.	.	hypothetical protein	MKFKIKQDFYDWELNVKRLAGEELEITEERYAELADNFASNGVAISDVLEEILPEPEFLEED*	.	hypothetical_protein	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0012	shell	direct	high	188	0.995	GCA_013277295.1_01333
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	8209	8391	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	8210	8392	GCA_013277295_1_66_13	GCA_013277295_1_66_13	-	20413	.	PFAM:PF09124.9	endonuclease-VII	MSLLLRRHYIQEEQAGQYSDLENKTLEELKNLAKEAGITGAYKLSKAEIVEVLEDLKSEI*	phrogs_hmm	hypothetical_protein	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0013	shell	direct	high	182	0.995	GCA_013277295.1_01334
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	8403	9245	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	8404	9246	GCA_013277295_1_66_14	GCA_013277295_1_66_14	-	20413	.	PDB:4AN5_F	Major-Capsid-protein	MTARQTKLATMVNPEVMADMVSAKLPKLIKFTPLAYVETALQGQPGNTLTVPAWEYAGDATEVGEGQAISPDQLTTKKTTMTIKKAAKGYEITDEALLSGLGDPLGQATYQLGLAIANKIDDDLVAVAKTATQHVAEAPTTLEAIDKALDIFEDEEDAQYVAIINPKDATKLKTDVAKEWTKGSELGANMVVSGTFGEVAGVQIVRSKKVEEGKGFLVKVSPSQTQTDDANKYGAFVIMLKRDVAIETDRDILKKTTVITGDKHYGVYLYDPTRVVKFGE*	hallmark_hmm	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0014	shell	direct	high	842	0.999	GCA_013277295.1_01335
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	9251	9820	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	9252	9821	GCA_013277295_1_66_15	GCA_013277295_1_66_15	-	20413	.	PDB:6B0X_d	capsid-scaffolding-protein	MNEETQTVETVEEQKVPAEPAQQPQDEKKYTDADVDAIIDKKFAKWKSEQEAKENEAKKLAKMNADEKQKYQLDQREQELVDREKAIARKELTAEAKAMLSERDLPVELVNVVDLTSAETVSQSVAVLQKSWEQAVQKGVQEKLKGGAPMKQAPVDSDGITKEEFARMGYQSRNELYQKNPELYKKLKG*	hallmark_hmm	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0015	shell	direct	high	569	0.998	GCA_013277295.1_01336
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	10110	11606	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	10111	11607	GCA_013277295_1_66_16	GCA_013277295_1_66_16	-	20413	.	PFAM:PF06152.10	minor-capsid-protein	MDKAEKQADQFDKVYQEAKTYLDKEVNKIFDKFQRDYGLSQVDARQVLKNMKDKKNLNELRKVLEARPNDPNIQRLLADLDSPAYSFRMKRLERLSDDLDCMRESIYHSEKTGSDAFYSDLMKDSYYKATFDLQQQTGLAYGFSGLPESEIKHLQSFSWVGDGSTYSTNIWKNTGKLTSSIKDELLMSLMTGRGTRETAQAIAERFDVGQNDARRLVRTESAFFHNQMELLSYEEADIEKYIFVAVLDKRTSHICQEHDNKVYDRDKAVPGVNCPPMHPWCRSTTVGYDEDADYSKLKRRARNPETGKTELVPADMTYKEWYSKYVAKDVKNEIQDYKKSDQTVSRYNTQKLFSDVSNAWDEIGKGGLSKEQLVGLLKSEYELGNFSSDITKLIGVSSAYIDVSSLATSLVRHGQQYSLDEFMLIKEAVQKPYLILDNSERVEKSIISYVKIPNKDKVIMEAVMVPRDEMLVIHFNKVGIRQVKKNGKNMLTLYKKEK*	hallmark_hmm	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0016	shell	direct	high	1496	0.999	GCA_013277295.1_01338
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	11569	12006	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	11570	12007	GCA_013277295_1_66_17	GCA_013277295_1_66_17	-	20413	.	PDB:5A20_A	Portal-Protein	MGLEMITKTKEANYKRGLRQRIAIFAHYLGMKQIALESHSIVPQFSRGLPKNLLEISQIVNNLEGKVTNRQLISLLPFVEDPDAELEALEEEKKKNMEDMPMFNKDNTKPEDEVEDEESGVLGEEESQSDLPADGQGRKAGRPVR*	hallmark_hmm	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0017	shell	direct	high	437	0.998	GCA_013277295.1_01339
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	12236	12769	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	12237	12770	GCA_013277295_1_66_18	GCA_013277295_1_66_18	-	20413	.	PFAM:PF05551.10	homing-endonuclease	MIKDKMHKHLNQVYYSMLARCYDEKHWAYKWYGKRGIGVSDEFSDVAKFRSWAMQNGVEFGLQLDRIDNDKDYSPSNCRWVPEHTNKRNRSDNVKYKGYILRDYLKKLSEENNISFSTLVYRYYRSIKRDDIIVNDETIDDILLNYKKYDLRQFSKGVDMSGKTIVRDEKGRFVTYY*	common_virus_hmm	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0018	shell	direct	high	533	0.998	GCA_013277295.1_01340
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	12898	13917	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	12899	13918	GCA_013277295_1_66_19	GCA_013277295_1_66_19	-	20413	.	PDB:5A20_A	Portal-Protein	MYQYLTYPRDGYDEGSLKKDLIYKLITIHNTESSHLKKLKSYYLGEHAILEHTRRNVNAPNYKTVANHAKDIADTATGYFMGNPIKYNNTAEGDIDELLTAFDGAEIDQVDAQNALNMAIYGRAYEYIYAKEGLTELDSTSIDPENTFMVYDDSIERKPLFAVYYYKVEDDTKDTTKHQAEVFTENLHYHMVLRDSSTGTTQNEEVEEHNLGQIPIIEYRNNHFAIGDYEQQISLIDAYNSLMGNRVNDKEQAVESILVLYGTQLADTPEDAKVAMKILSEEGLLELPGDSARAEFLKNTLDESATEILRTALKEDIYTFSHVPNLTDENFAGNTSGVK*	hallmark_hmm	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0019	shell	direct	high	1019	0.999	GCA_013277295.1_01341
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	13929	15152	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	13930	15153	GCA_013277295_1_66_20	GCA_013277295_1_66_20	-	20413	.	PDB:5OEA_B	Large-Terminase	MTLEQLYTTKQVDILKRSVSSDWYMMINHGAVRAGKTKLDNDLFLMELKRVKKNAEKVGVKNPMYILGAVSSGTLQTNILREISDAYNHDFRFDRHGNFSLFGVYVVTTFTGSIAGLKAIRGMTSFGAYINEATLANKEVFDEILKRCSGFGARIICDTNPDHPKHWLKVNYIDKADGSKIISNHFTIFDNTFLNQRYINNLIAITPSGMFTERGIYGRWVIGEGAVYRDFEESMYVKEIPDEITKIYAGVDWGYEHFGSIVVIGETSGGSAYLLEEHAHQYKEIDFWVDLAKNIKERYGNITFWADSARPEHVARFQREQLRTFNANKAVLSGIEEVAKLMKAGRFFVVSNKVSKFKDEVYQYIWNEKTGEPVKDNDDVLDAVRYAIYSQHSQPKATVRRRSDYGL*	hallmark_hmm	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0020	cloud	direct	high	1223	0.999	GCA_013277295.1_01342
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	15142	15600	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	15143	15601	GCA_013277295_1_66_21	GCA_013277295_1_66_21	-	20413	.	.	hypothetical protein	MANEQNLIKNSERTPSERRENAKKAGEASGKARRKKANLKKAFETILQADVANPNVKKQLEDLGFDSTNEMALAMAMMQKAMKGNVRAFEQISKLTTTDVKDSLDKKEQKERIKALELENEKRKITLEGGAKSEDVMSDYFDKLEDTLGNDS*	.	hypothetical_protein	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0021	cloud	direct	high	458	0.998	GCA_013277295.1_01343
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	15629	15913	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	15630	15914	GCA_013277295_1_66_22	GCA_013277295_1_66_22	-	20413	.	PDB:5HFJ_C	Adenine-specific-DNA-methyltransferase	MQDTTPTTIFYEDKPVRNDIHPTMKPLKLIARCVLNSSKKGDRVLDSFNGGGSTLMVCEKSERVYYGMELDPLYVARTIRRWEEETGLAAEKVN*	common_virus_hmm	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0022	cloud	direct	high	284	0.996	GCA_013277295.1_01344
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	15931	16884	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	15932	16885	GCA_013277295_1_66_23	GCA_013277295_1_66_23	-	20413	.	PDB:5HFJ_C	Adenine-specific-DNA-methyltransferase	MKIIDKPIEWLRPYEKNPRNNDQAVEAVANSIKEFGFKVPIVATPDGEIINGHTRFKAAKFLKLKTVPVLIADDLTEEQIKAFRLADNKTGELADWDIELLYSELDELTGFDMTMFGFEDIDFSLDDFEEVEKEEGSEVDINQEEKPEVEYGDIYQLGRHRLMCGDSTSAEDMARLINGETIDLYVTDPPYNVAYQGGTDEAMTIMNDSMDDVSFRKFLRDAFAVANNHLKPGGAFYIWHADSEGLNFRAAVKETGWLLKQSIIWVKNAIVLGRQDYQWKHEPCLYGWKDGASHYFVDNRSLATVIEEDEENLKEMT*	common_virus_hmm	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0023	cloud	direct	high	953	0.999	GCA_013277295.1_01345
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	17505	17951	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	17506	17952	GCA_013277295_1_66_24	GCA_013277295_1_66_24	-	20413	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MRLLKSVDVQFTKKNVYDVLESYRSYVRMAGAEYLPKITTTYSFEPKTFTGKNTATENMVIEHVDAEAEVLEIERAVNCIMDPYVRQVIAKKYMDMKIQLSDKAIYMDLGYSESEFYRMLSRGALEFAEAYRKGKLIVFRKFLGDICK*	mmseqs_cdd	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0024	shell	direct	high	446	0.998	GCA_013277295.1_01347
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	18081	18296	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	18082	18297	GCA_013277295_1_66_25	GCA_013277295_1_66_25	+	20413	.	PFAM:PF04014.17	transcriptional-regulator	MNTVKTRKVGNSVTVTIPKTLNVPEGQEMFVYKGVDNVIVLAPKIPDPFNGDADLRMEDDFEGVRFLDSEI*	phrogs_hmm	hypothetical_protein	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0025	shell	direct	high	215	0.995	GCA_013277295.1_01348
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	18280	18633	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	18281	18634	GCA_013277295_1_66_26	GCA_013277295_1_66_26	+	20413	.	COG2337	mRNA-degrading endonuclease, toxin component of the MazEF toxin-antitoxin module [Defense mechanisms]. 	MTAKYDYIPEKQDIIWIDFDPSVGREIQKRRPAIVVSRREYSERTGFVAVCPITHGQSRLEEQGLLVPVRSNKVDGSVNPLQLYTFDFRERKAQKITTMDTTSFQKVVQLYNFIFEA*	mmseqs_cdd	nonviral_gene	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0026	shell	direct	high	353	0.997	GCA_013277295.1_01349
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	18654	19061	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	18655	19062	GCA_013277295_1_66_27	GCA_013277295_1_66_27	-	20413	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MIPKFRAWDRLRKEMNYKVMVGNCDLSDENWTCPIIWIEEKKDWLHFDDYECIMQSTGLKDKNGKEIFEGDVLEIQDEGEVLGNAKLTWDNEQAVFMIEAISVDDIAPFHEILSDESYSYRVVGNVYENPELLEN*	mmseqs_cdd	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0027	shell	direct	high	407	0.998	GCA_013277295.1_01350
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	19058	19549	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	19059	19550	GCA_013277295_1_66_28	GCA_013277295_1_66_28	-	20413	.	PFAM:PF03819.16	MazG-like-pyrophosphatase	MNTLEKVKQWFIDRDLENGGRLDKQSLKLSEEFGELCAGYLKKNEKLTKDSIGDCAVVIVGLGLLSKVDLDSIFEESKNVRKNDIMTSFAYANTCISNIQTEQHLKLMTLRIKSLTLLIGHLKSISKSLGYDFEECFELAYQEIKDRKGRWIDGSFVKEEDLA*	phrogs_hmm	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0028	shell	direct	high	491	0.998	GCA_013277295.1_01351
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	19546	19806	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	19547	19807	GCA_013277295_1_66_29	GCA_013277295_1_66_29	-	20413	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MKRFIAIWILLSAGLNIWQSIHIKKLEEKRPMVIYKADNAGAEIFGKVVEKGRHGKLYTLTIRDYGIFVVTKDVYEKIRVGDEVLL*	mmseqs_cdd	common_virus	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0029	persistent	direct	high	260	0.996	GCA_013277295.1_01352
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	19803	19964	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	19804	19965	GCA_013277295_1_66_30	GCA_013277295_1_66_30	-	20413	.	.	hypothetical protein	MSLTLNSTIRDLVLAIGEVIVGSDGKTTTAILEIPDQSFYLEIELKLKEEVID*	.	hypothetical_protein	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0030	shell	direct	high	161	0.994	GCA_013277295.1_01353
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	19964	20269	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	19965	20270	GCA_013277295_1_66_31	GCA_013277295_1_66_31	-	20413	.	.	hypothetical protein	MKYKVTEYHSDFQEEQTGTCELCFGTAWVENGSITVEDENGTETEIYLTVWDWGDYDTIYIDNVVNFSAWLQEREVDPIVEETEPWSWLHELVEKYNEEVE*	.	hypothetical_protein	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0031	shell	direct	high	305	0.997	GCA_013277295.1_01354
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	CDS	20259	20411	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	20260	20412	GCA_013277295_1_66_32	GCA_013277295_1_66_32	-	20413	.	.	hypothetical protein	RTIEQNEEKIIEYSKPCDARKRRIRALERDLLKKKNKELRKKVEELEDEI*	.	hypothetical_protein	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_CDS_0032	shell	ambiguous	low	12	0.078	GCA_013277295.1_01354
GCA_013277295.1|VMMQ01000104.1@region_1_5071@tool_cenote	cenote	CDS	1	3491	GCA_013277295.1	VMMQ01000104.1	GCA_013277295.1|VMMQ01000104.1	GCA_013277295.1_VMMQ01000104.1	GCA_013277295.1|VMMQ01000104.1	GCA_013277295_1_7	GCA_013277295_1_7	1	3492	GCA_013277295_1_7_1	GCA_013277295_1_7_1	+	5071	.	PDB:3GUD_A	Neck-appendage-protein	AEFTKREKAITDAIELAKAKAEEVKQEVSDTINQRFNSFHDEPLRESRRKAEEALRQAGASSSLAQEAKRIGLDSVARLEAFKSQTRSAQTALSGDLNLLKQTVTNDISSKQRQLKTDISKQVQALGQIKNDLAGVRSSQARYEETTKGRLTALTNRMEGKANKSEVRQTAETLTSQIDRIQEESSTRISTMTSRFNQRADALDAGVRRLTEGLRTKVDISSLNVTAENIRQSVRRLERDTQSQLNQKLSTAEFEVRAGSIRQEILNATKDKADKTLVVAEAGKLREEFSNMQVGGRNYYRDSEKIQQSRFGFVFDNLDPYLSKSDIGTTWTLSFDYKLDEVDGSFPFHMMHNGGNGFGIEGQTKSTATREWQRFRLTGPVFFKEDAPSESKLQMTLFNSDLGYGGPIFIRRIKLEKGTLATDWSPALEDTNGLITQAKASFERTAQELRTDLSAVQAYVAQDGQRQESLQRYTREESARQARAVREQISRDYVGKSSYQEDVEGIHRRIEGVKTSANREITSQIASYRQSADGTFRDISSRITTYKQDMTRNIANLSHQLAGKVETTDFQRVRESSQLYERILGNTENGIADKVARMAMTNQLFQVEVGKYSVSGPNLIKNSDFKNDTNKWVSTQNLGRLVKHSFYHNGQKDLMRLSNATKNKNFLSSHRFNLERNTDYVLNFRGFNNSALASYDVYILGRRAGESDGFTIFKKVVSSKKLSTSRCEDVSVTFNSGEMDNAYIRFENNGSSSGTADLYITEVDLYKGYKPRTWQPHPEDAVADANKKLEATQTKMTQLAGSWLVQNINSAGDLISGINLGANGHNRFVGKLTHITGETLIDRAVIKSAMVDKLKTANFESGSVTTAVLAAEAVTADKVKFDHAFIRKLIANDAFIGELTSKRIFATKIESVVNRSTFLEAYQGQIGGFTIGRFAQGRGRWISGVNQFSVGMGNGEGGSYNGENTAFWANWGYSWNSPGPNAWYVTTLGNMHCRNGANFHGRVDFSNSSRANFYGNTTFSRSPVFLNGIELGSKDVFGDGWNPKGGRNAVVWWNQVGSGSVKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIESKKHEEIGLIAQEAETIVPRIVSRDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMENRHG*	hallmark_hmm	common_virus	NaN	.	0	5071	GCA_013277295.1|VMMQ01000104.1@region_1_5071@tool_cenote_CDS_0001	shell	direct	moderate	3329	0.954	GCA_013277295.1_00063
GCA_013277295.1|VMMQ01000104.1@region_1_5071@tool_cenote	cenote	CDS	3484	3690	GCA_013277295.1	VMMQ01000104.1	GCA_013277295.1|VMMQ01000104.1	GCA_013277295.1_VMMQ01000104.1	GCA_013277295.1|VMMQ01000104.1	GCA_013277295_1_7	GCA_013277295_1_7	3485	3691	GCA_013277295_1_7_2	GCA_013277295_1_7_2	+	5071	.	.	hypothetical protein	MDNHTIDKLVAESLVDRLADIELNYAHLNVHHRLALAELQAFKAVLEYDPALKELFDETQAKMKGNKE*	.	hypothetical_protein	NaN	.	0	5071	GCA_013277295.1|VMMQ01000104.1@region_1_5071@tool_cenote_CDS_0002	shell	direct	high	206	0.995	GCA_013277295.1_00064
GCA_013277295.1|VMMQ01000104.1@region_1_5071@tool_cenote	cenote	CDS	3687	4220	GCA_013277295.1	VMMQ01000104.1	GCA_013277295.1|VMMQ01000104.1	GCA_013277295.1_VMMQ01000104.1	GCA_013277295.1|VMMQ01000104.1	GCA_013277295_1_7	GCA_013277295_1_7	3688	4221	GCA_013277295_1_7_3	GCA_013277295_1_7_3	+	5071	.	PF07104.11	Protein of unknown function (DUF1366)	MNYEVAINPYLKGGENVTVVAIKMENKGRYSYEQCELPGDHTQDSEDALIQAVLELVRTELDPTSAIVKNQEQLAKTTEALERANQLMDGMQKVNLQNAQDIEDILARLEELEAQGESDQEETDEDTPQVTDTENQAEEAQPTPAVEDKKESEKEDDISETTNQESPSEDNGGSSNE*	hhsuite_tools	hypothetical_protein	NaN	.	0	5071	GCA_013277295.1|VMMQ01000104.1@region_1_5071@tool_cenote_CDS_0003	persistent	direct	high	533	0.998	GCA_013277295.1_00065
GCA_013277295.1|VMMQ01000104.1@region_1_5071@tool_cenote	cenote	CDS	4213	4365	GCA_013277295.1	VMMQ01000104.1	GCA_013277295.1|VMMQ01000104.1	GCA_013277295.1_VMMQ01000104.1	GCA_013277295.1|VMMQ01000104.1	GCA_013277295_1_7	GCA_013277295_1_7	4214	4366	GCA_013277295_1_7_4	GCA_013277295_1_7_4	+	5071	.	.	hypothetical protein	MSKITLDQAKIDMYINLLERGAVDFSWVHKRWKDRVRKELKRRGLSHLAN*	.	hypothetical_protein	NaN	.	0	5071	GCA_013277295.1|VMMQ01000104.1@region_1_5071@tool_cenote_CDS_0004	persistent	direct	high	152	0.993	GCA_013277295.1_00066
GCA_013277295.1|VMMQ01000104.1@region_1_5071@tool_cenote	cenote	CDS	4376	4654	GCA_013277295.1	VMMQ01000104.1	GCA_013277295.1|VMMQ01000104.1	GCA_013277295.1_VMMQ01000104.1	GCA_013277295.1|VMMQ01000104.1	GCA_013277295_1_7	GCA_013277295_1_7	4377	4655	GCA_013277295_1_7_5	GCA_013277295_1_7_5	+	5071	.	PFAM:PF04531.12	holin	MTEIEHLLIRFLFSLIPVVVLYFSMKDRATKQENRMTAIEKDIENLREFRMSANKRLDNHDEQNKAILVLAEQVKSLGEDVRELKTLIQSKQ*	phrogs_hmm	hypothetical_protein	NaN	.	0	5071	GCA_013277295.1|VMMQ01000104.1@region_1_5071@tool_cenote_CDS_0005	persistent	direct	high	278	0.996	GCA_013277295.1_00067
GCA_013277295.1|VMMQ01000104.1@region_1_5071@tool_cenote	cenote	CDS	4670	5065	GCA_013277295.1	VMMQ01000104.1	GCA_013277295.1|VMMQ01000104.1	GCA_013277295.1_VMMQ01000104.1	GCA_013277295.1|VMMQ01000104.1	GCA_013277295_1_7	GCA_013277295_1_7	4671	5066	GCA_013277295_1_7_6	GCA_013277295_1_7_6	+	5071	.	PFAM:PF14606.5	neck-protein	MVCNLNMTNLRQIDGGHLIKQGDLASTFGFALLDEDYQVISSLEGKEALISLTKEGYQWKKQVTVTGQGVSFHLDAILPIGSYRLEITAGGYVFPSDKSVHIKIVASDKELVTEEVHALKELDIAEEVILS*	phrogs_hmm	hypothetical_protein	NaN	.	0	5071	GCA_013277295.1|VMMQ01000104.1@region_1_5071@tool_cenote_CDS_0006	persistent	direct	high	395	0.997	GCA_013277295.1_00068
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	1	1107	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	2	1108	GCA_013277295_1_97_1	GCA_013277295_1_97_1	-	17157	.	PDB:3GUD_A	Neck-appendage-protein	MIYLTEGNRPLNEAYNDEIVHFGNNTYQLTFRFPTSDPKWELLKEETFLTADDLHGEQDFYIFEVEKQQGYIQVYANQVISLLNNYIVSSIEVDRVSGTRVLSAFAGSITRANPFSFFSDIDDRHTLNIKDKNAMEVLAKDKHSILGQWGGDMVRNGYNLRLLKNGGSENESLFMYKKNLSSYQHKTSTKSLKTRITFKTTVKGEGENAVDHDYMVVIDSPLLGNYSQIYEDVVEVNDQDVTDEASLIAYGKQYFRTSMCDMLEDNLEISVVGQSDVAVQMFDVVSIYHEWYGLDVRKKITKYTYSPMAKRLKSIGFGTFQSSLANAIGGIVNDAVLNESRNLHQIFEERLKKEIANADRAFDAEFTKR	hallmark_hmm	common_virus	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0001	persistent	ambiguous	low	3	0.003	GCA_013277295.1_02062
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	1104	1802	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	1105	1803	GCA_013277295_1_97_2	GCA_013277295_1_97_2	-	17157	.	PDB:2X8K_A	Distal-Tail-Protein	MFYMIINGFNTATIPHCVVTDFGQVEAAKPRVVEDANLYGANGSYRVLDGGYESYERTFSFYIPKLLDVSTIVEKFQPKDNVLEFSYQLGSVFYADFIGATYSPHGMHAWKLELKLSMQPFRYQKSVEPLIFTASGNINNPGSVYSEPVIEIEGDGDISLTIGRTTMHLTVRRKVTIDCRHKKQNIYNADGAVQNTLRKRGGFFELAVGNNGLVFTGAVRKVTVRPNWRYIL*	hallmark_hmm	common_virus	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0002	persistent	direct	high	698	0.999	GCA_013277295.1_02062
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	1802	5977	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	1803	5978	GCA_013277295_1_97_3	GCA_013277295_1_97_3	-	17157	.	PFAM:PF10145.8	minor-tail-protein	MASGTPLGQMYIELGLDVSKFSPTLTGAKNAVKYFQNNVRSLDSTLKGNEKNASLLQAKYKTLGQAIDSQRKVLDEMKKSFDKLEPGTAKFDKAAADIQRENAKLAVMEGQLRGVEKALQDVGRENSWSGKIDALSEKFAKGGEKLRAMGDAMKPVSAALLAGFTLSTKKAIDFESQMNTTKSLLADTIPTADELNSTTQKLGESSKNWAKQYGISTASINEGMQEIIKKGFDANQTIEAMPAILDAAKASGEDFNTVMNATTNILQQFGLSTQDTERVTNSLTFVANKTAAGFADMGAAMEYVGPVAKNVGMNLEETAAAVGLLSNNGIAGEKAGTALRGALTRLLKPSEQNANAMEKLGFSAEEFRSGAIKLPDILDRIKKNTEGMTDAQKSALIATAFGTEAQTAMNILVDQGGDALRNLANETKGATTYTKDLANELSKSSKNGVERFKSSLEVLQINIGQKLLPLLTPVIDKVNQFIDWLSKAPPAVQSLAVGIGGFLALGYPFLNFLGNGATALSILIKHAGKLEGLLKGGLGLAKLTERAGKLKGLLQGGLGLAKVGSEATVLAEGAGAAASSSSLLSGAIGALTNPIGLLVGGAALLAGGLVYLGHKKDEARIKAEEFGSQLSDTARKELRDFQSKVDDTSTAVANFGTHAGDAEKVSEAFRKLHEEVAAGAEKANQRMEELAKKLGFSDEEIAKMKVKNDQVVSNTDAMANQVSEIYKRHNGDASKFSQEEKEIVLNNQREMIKARIEMMELSGEQQKAALQALNGEIGSLNETQLKHTRDVLKKALDEENQLYKTSKDGLKQLLDAKRIDQETYNKKIQELETNHQQTMEALGTKYYQVMQNLDAKVKARTGQSWNYWEEAKKVLEEYGLSYEVIGQKAAEASQKMGDSHSILAKYTSDMSKETREANDAWSLLVGNIDENNNFVIKSNVKEVIGEATKSAEGWEQLQFIVKNANINSNARVTIAEALVESGKWSTMTLEEKQLIVQNQAGLQAIFDSENHLRIWNSMPAEVKQLLLENTDVMNKAEEASKALYNYDALTPKQKELLATDENFRKAVARSTDTLTTWNATTPFTKDLKLDPTNVLNNGQLSIDKIMAWNLSNPENKSLNATDNTSEAVASAKASVNSPKQEKPIDLLAKDQTAGVRNETSAAINAIKQHNPVDILAKNSTSSTVSEVKSVVNSIQDKTVTISARDNASGVLAGIRSWITRVTGDFFTNVFASRHAHGTNYHPGGLAMVNDQRNSTYKELVTLPDGRSFIPEGRDVLLPLPKGAKVLRADKTKRLMREMGVPKYAAGVGIPSDAKFLREMEEAQAKIVVQTKGDTNSKDSDKVVSEIAILRASMEKILTAILEKPSDTYLDADKISMSVYQRQGAIYAREGM*	hallmark_hmm	common_virus	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0003	shell	direct	high	4175	1.0	GCA_013277295.1_02063
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	6034	6264	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	6035	6265	GCA_013277295_1_97_4	GCA_013277295_1_97_4	-	17157	.	.	hypothetical protein	MSRKEKACRRYWFWFTIFILYLAFGLYCICTNFVDIFGMLLLSPFIFASLPLYAYLFLGMFIWAFMNMAMDDFYKE*	.	hypothetical_protein	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0004	shell	direct	high	230	0.996	GCA_013277295.1_02064
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	6513	6806	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	6514	6807	GCA_013277295_1_97_5	GCA_013277295_1_97_5	-	17157	.	.	hypothetical protein	MAKVQFTIKNDKGEDVLKKSKEITTRDYRDYLVMNESLTSDLSEVEKLDKQLGFIASLFDDVTVEQLLEYTDFAKVISIFTAIYAHLVGDVDPKEKS*	.	hypothetical_protein	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0005	shell	direct	high	293	0.997	GCA_013277295.1_02066
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	6852	7448	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	6853	7449	GCA_013277295_1_97_6	GCA_013277295_1_97_6	-	17157	.	PFAM:PF04630.11	major-tail-protein	MTVKGTALIGLKSVTIRVHDGQTPTVGQNLFTLEGKDNEGATQTARVTGLSSDPVKTYGSNVAYHVSNRGVGDVKVEMGLLDVPLALYTNALGYGDDDGIYYFGADTVAKNVSILIESNTADGEPVYYGFYKGQLSMDAIDFETLKDKANELATTSVNFTATASSDVATKGRYGAIVYGSDAEKLKKLKGQLNITAAG*	hallmark_hmm	common_virus	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0006	shell	direct	high	596	0.998	GCA_013277295.1_02067
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	7465	7845	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	7466	7846	GCA_013277295_1_97_7	GCA_013277295_1_97_7	-	17157	.	PFAM:PF05657.10	tail-component	MIKDKLTELYDALEEDESLSGISIKSFERPESLGDGETSIVIIPVGPPMQTAHGSNTSLAKTFLYQINVESTNRVECKELQGRIEKIMEEQGFYQTEGGLEQWIPDIKRYVDVRTYRGMSALYEKY*	hallmark_hmm	common_virus	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0007	shell	direct	high	380	0.997	GCA_013277295.1_02068
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	7845	8243	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	7846	8244	GCA_013277295_1_97_8	GCA_013277295_1_97_8	-	17157	.	PFAM:PF04883.11	tail-component	MSSGANLKGFDDILRNIEARLGEPVIRRKVNRALKETVEEFEPTFKRAMAVYADTGKTVGAVVHGNVTGTSSGVPMVKLGFKSPRWTLIHLNEFGYAKNGHPRGFGVMRRFFEASKPVFKSKVGMKLKQEFL*	hallmark_hmm	common_virus	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0008	shell	direct	high	398	0.997	GCA_013277295.1_02069
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	8236	8625	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	8237	8626	GCA_013277295_1_97_9	GCA_013277295_1_97_9	-	17157	.	PDB:2KZ4_A	head-closure-knob	MKRSEGPSYRYKKPESQNGDLRTPLTFYTSKIKKGVDGRDVSYEKAFYTMGQTYSPSMKDVEIATGKAMKAKMTLKIRDPLTDYQPENRHFVEVGDIRLVGKKWQIIDVRPDFANRDFLIVLIGGGRDV*	hallmark_hmm	common_virus	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0009	shell	direct	high	389	0.997	GCA_013277295.1_02070
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	8612	8800	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	8613	8801	GCA_013277295_1_97_10	GCA_013277295_1_97_10	-	17157	.	.	hypothetical protein	MIKVLKEFYDLKEGVLRQVGERFEATEERFAELKEHLPDYVELEKSSRSRSSKEVVSVNEEE*	.	hypothetical_protein	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0010	shell	direct	high	188	0.995	GCA_013277295.1_02071
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	8793	9083	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	8794	9084	GCA_013277295_1_97_11	GCA_013277295_1_97_11	-	17157	.	CDD:cd08054	Head-Tail-Connector-Protein	MEIEAKLHSLLIPFKERMRIFHSGEDANLSRMLESSQMVITRLVGSGNIHDHQIRELILERARYVYNDQVEFFYENFKADILALSLDKIEMEDSDD*	hallmark_hmm	common_virus	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0011	shell	direct	high	290	0.997	GCA_013277295.1_02072
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	9097	10212	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	9098	10213	GCA_013277295_1_97_12	GCA_013277295_1_97_12	-	17157	.	PFAM:PF06673.10	Major-Capsid-protein	MMKLGNEFTTARQNFMNAVETGAPMEEQNKLYNEMIEALTDKLQDDAREAARKEIATMNPYDAQLTAEAREFFNNIEKLPPKGIEKLFPQETIDRIFEDMVAARPLLQHIGLRNAGIRLKFLKSSRTGQAVWGKINAEIQGQLKQEFAEEEAIQSKLTAFVVIPKDSEKFGPAWLQSYVSIQITEAFAAALEAGYLNGDGDNKPIGLSRTLTGTAESEKVTYAEKQAQKKPLTFADSATVVKELTEVYKYHSTKADNTTPVAVEGNLVMVVNPVDAWDVKKQYTSLNAQGVYVTAMPYNLILVESVAQASGKVTTFVKGRYDAFVGGGIEFGRFTETYALEDLNLYTAKQFAYGKAHDEKTAAVWTLSIAK*	hallmark_hmm	common_virus	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0012	shell	direct	high	1115	0.999	GCA_013277295.1_02073
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	10231	10953	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	10232	10954	GCA_013277295_1_97_13	GCA_013277295_1_97_13	-	17157	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MTIIQIKGAIVSNDDRWFYDWLDMDATAPKDIVLPTTGEDVEVHINSGGGDVYAGSEIYTALRAYQGHVTVKIVGIAASAASVIAMAGDQVEISPTAQIMIHNVSAGVRGDHKALLHEAGVLEGFNKSIAYAYIDKTGKALDDLLDLMEGETWFDARSAVNHGFADKVMFESQEAPVLVASQTPVIPRDFIEKIRSAMTPDVELLADLVRDRLNNSLPIPEDKKKEDKTAEPVGLGRFPF*	common_virus_hmm	common_virus	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0013	shell	direct	high	722	0.999	GCA_013277295.1_02074
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	10934	12082	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	10935	12083	GCA_013277295_1_97_14	GCA_013277295_1_97_14	-	17157	.	PFAM:PF04860.11	Portal-protein	MGFLNLFKRDAPDVGFDFEELERMLGCLQLKSLAIDKSAEFVARIFAKSEFRYMVENHHVTSDWDYILNVRPNKNESASEFWQKVIYRLLTKNEVLIVLSDDKQLLVADAFTRRRYALYDDTFEMVSVGDYTFQRKFAMSDVIFLQYNNNRLQEYVSDLFSDYEKLHTRLVEALARNNQIRGVLATKANGTFDEDKRKKLQRYADNLFKSFTSKTVAIVPTMDGVEYSELTNTVGTTNLSVEELKKLRRQFDDEVADILGLPTALMHGDMADLSNSQKMFNSYCYESLVKKVGDALNHAMVSSAGYANQKKFVIFGEGGLDKFALAENIDKLISSGAMTRNEVRLELGLEAVPGGDSFLITKNYQGENEIEKGGNEDDNHSD*	hallmark_hmm	common_virus	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0014	shell	direct	high	1148	0.999	GCA_013277295.1_02075
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	12138	13778	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	12139	13779	GCA_013277295_1_97_15	GCA_013277295_1_97_15	-	17157	.	PFAM:PF03354.14	Large-Terminase	MISHPLVDDYIKMAENGEVVVNKERKLLFKIIKEKIYPRDDLYFDNDLIDKFIRFAEKNFFPLAKYQLFLTPFIFLFRKVDEEPHFDEYLYTLARGGGKNGFMSARSSFFISPIYPIRDYDVTITANSEKQGKVSFEEVYETIQRRGLEDHFYLTKMSITGRANNSVFSFRTNNPKTMDSARDGCLEFDEIHQFENDKAVKVQRSGLGKIAHVRTFYNGTNGYVREGFYDKLIEKSMQILNGEVDDFRLFPFICKLDSADEVDDMKNWPKANPMLDESTPYAKRLLARTKADYDDLELEPSGRQEFMTKRMNLPEADLEKDVTTRERLLACLRSPGIDLLGKSCVAGFDYASIRDFASVGLLFKNGDEFIWKQHSFARKAFLKAFKLKAPIQEWADRGLFTIVDGPSIDPRLLVEKLNEWSKFYQIELVCADGFRMDLLKPLLEEAGFEYEFLRNPGAIQSKVAPIIEDGFANERFVFENDNSMIWYTDNTYVKEDKDGNKRFLKKEPVRRKTDGFHALIAALYKRELVHESNVGEFLDMLEDWEF*	hallmark_hmm	common_virus	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0015	shell	direct	high	1640	0.999	GCA_013277295.1_02076
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	13775	14113	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	13776	14114	GCA_013277295_1_97_16	GCA_013277295_1_97_16	-	17157	.	PFAM:PF05119.11	Small-Terminase	MEEYSEKNIKELENQLLSKIGYFSPRKKDAIQYEKVNRYLYLVRLLYELKAKLHEDGLVITVHNGQQRFQKANSLIKEINTTSNQLLAIERSFDFDVENSPVEKATSGSDLL*	hallmark_hmm	common_virus	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0016	shell	direct	high	338	0.997	GCA_013277295.1_02077
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	14233	14529	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	14234	14530	GCA_013277295_1_97_17	GCA_013277295_1_97_17	-	17157	.	PDB:5H0M_A	HNH-endonuclease	MIEVSTREERNQFYNSSEWRTIRRQALKRDHYECVWCRDEGKVTTTNLEVDHIKELEFYPEFALDIDNLRTLCKACHNKRHDRFDKNDRNFRKDEWWG*	common_virus_hmm	common_virus	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0017	.	unmatched_CDS	none	0	0	.
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	14743	15285	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	14744	15286	GCA_013277295_1_97_18	GCA_013277295_1_97_18	-	17157	.	CDD:cd01192	site-specific-tyrosine-recombinase	MNIVEPIRDKDDIQAMKDYLREWNERNYILFLFGINSGLRVGDILKIRVKDVQGWYIKLKEQKTGKKKKIKMTKTLKREVREYIQNKPHHHFLFQSRVGKNKPLDRRTVDWILKVAASECGIENIGTHSMRKTFGYHYYKKTKDIAMLMSLFNHSSPAITLRYIGIRQDQQDKAMSNFGL*	common_virus_hmm	common_virus	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0018	shell	direct	high	542	0.998	GCA_013277295.1_02078
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	15585	16013	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	15586	16014	GCA_013277295_1_97_19	GCA_013277295_1_97_19	-	17157	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MQIELLDIIDEKKTRKEAIKVLKKYSRLRRIAGEEYAPKITISYSLEPKSSSGQTSKQVESMVLRRVSAQQDLELIAKAINNLSDMEYTRILIERYCRKKRREDYSIYSELGYSSSEYYRILNKALLEFAESYQASNLLVYK*	mmseqs_cdd	common_virus	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0019	persistent	direct	high	428	0.998	GCA_013277295.1_02079
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	16084	16314	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	16085	16315	GCA_013277295_1_97_20	GCA_013277295_1_97_20	-	17157	.	PDB:2FJR_A	Repressor-protein-CI	MKDKLNPRQASRFAFLLKQKRKERKLSQEKLAAKLGYSRYLIAQWEKEESVPNIYNVEDICTYFAFPADIILGSRA*	common_virus_hmm	common_virus	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0020	shell	direct	high	230	0.996	GCA_013277295.1_02080
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	16304	16489	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	16305	16490	GCA_013277295_1_97_21	GCA_013277295_1_97_21	-	17157	.	.	hypothetical protein	MNTHCMKATPLLPWGRLRKSAKKSKETGIAERMLKYYTFASTQRRNPNGRAVVKIEVDDEG*	.	hypothetical_protein	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0021	shell	ambiguous	low	12	0.065	GCA_013277295.1_02080
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	16486	16722	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	16487	16723	GCA_013277295_1_97_22	GCA_013277295_1_97_22	-	17157	.	PFAM:PF11753.7	nucelotide-kinase	MNPEIIDNINKPSHYQGANGLEAIDVVHNFVGNLSGASAFFWGNAIKYMLRFQKKNGLEDLKKARKNLDWLIEEMEHE*	common_virus_hmm	common_virus	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0022	shell	direct	high	236	0.996	GCA_013277295.1_02081
GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote	cenote	CDS	16719	17141	GCA_013277295.1	VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295.1_VMMQ01000088.1	GCA_013277295.1|VMMQ01000088.1	GCA_013277295_1_97	GCA_013277295_1_97@C0	16720	17142	GCA_013277295_1_97_23	GCA_013277295_1_97_23	-	17157	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MTPKFRVWDSVEKKFVEHFFITDNGLICNMEKPTSDSKLLIPIEKSELILMQSTGLKDKNGVEIFEEDVVSRNSGMPSVVKFGKWIYEEDFGYKIKNIGFHLNSSYDDEWFQAMDYEDIRKNYEVIGNIYENPELLEDKE*	mmseqs_cdd	common_virus	C0	17158.0	0	17158	GCA_013277295.1|VMMQ01000088.1@region_1_17158@tool_cenote_CDS_0023	shell	direct	high	422	0.998	GCA_013277295.1_02082
GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote	cenote	tRNA	16980	17059	GCA_013277295.1	VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295.1_VMMQ01000058.1	GCA_013277295.1|VMMQ01000058.1	GCA_013277295_1_66	GCA_013277295_1_66@C0	16981	17060	tRNA-Lys	tRNA-Lys	-	20413	.	tRNAscan-SE score: 63.8	Lys	NA	tRNAscan-SE	.	C0	20414.0	0	20414	GCA_013277295.1|VMMQ01000058.1@region_1_20414@tool_cenote_tRNA_0001	.	.	.	.	.	.