core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	1	1376	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	1	1377	GCA_013277355_1_42_1	GCA_013277355_1_42_1	-	19434	.	PFAM:PF07902.10	minor-structural-protein	MDALTRRQFDRAMFAKERTLAIRVGDYTSRDIKEASFEYGYIKGDTYKPGGTCAGSGKITFTSIITTFNKLDTLHPEIGLLVGDTYQWVKMGEYFINDIEIDRNRNTTTLELMDGMFKLNREYVTDLHFPAEVREVIQEICLKTGIELANDYFGISAMRYHVEQVPEGKKLSFRDMLSAMTQMIGMSCFFNREGKMEIRDLTESNITINADSYFLHGLTKSEIEYQIAGITCKTDKKPLTVGMKTGRSLELDNVFMTQSALNDLYYKLKNLTYYPYNLNYQGHLLLEVGQWVTIQTNKKETFKVPVLSQSFTFKGGLRGRISADSKAGNDTQYSYEGTITKQIKQQDGIEAKIQAQIEAADAAFDAEFTKREKAITDAIELAKAKAEEVKQEVSDTINQRFNSFHDEPLRESRRKAEEALRQAGASSSLAQEAKQIGLDSVARLEAFKSQTRSAQTALS	common_virus_hmm	common_virus	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	1381	1731	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	1382	1732	GCA_013277355_1_42_2	GCA_013277355_1_42_2	-	19434	.	.	hypothetical protein	MAQLTINGVAVKPPKSFQVGIQDIDGETGRNANGDMVRDRITTKRKLDCEWGMMTQGELSQLLHAVSSEFFEVSYPDPMDGQVTKTFYVGDRTAPSYSFTEKFKPWSGAKFNLVER*	.	hypothetical_protein	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0002	shell	direct	high	350	0.997	GCA_013277355.1_01121
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	1740	4853	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	1741	4854	GCA_013277355_1_42_3	GCA_013277355_1_42_3	-	19434	.	UniProtKB:A0A0R1V141_9LACO	minor-tail-protein-	MAMIESTEAFKKFANGQSWQQLDYQTQQQIRLMAILEQATAKYGNTLSNSVNGRISLFKSLMKDAALNLGNSMLPIINAIMPVLNSFAMVLKNVTAKLAEFIALMFNKKATVKDGVGGAVGDMGNAMKDAAGGAGDLADAVDDAGDSAGGLADNLGDSAKNAKKAAKELLGLLGFDEINILQKPKDDDAGGSGGGGGGKGGKGKGGGGGPFKDILPEVELTDMDNQFKSIFDGLGDKLKGLFDLFKKGFDAAFRPEGIERIKTALDQIAKTMGEIATDPRVVNAFNRMAEKIAYALGQVTGSIATIGLGIGVFLAESIANGLGRQKERITRALVALFDNIGNIAEAVGNIAQAFSSAFYDVITSTGAVRIGSAIVSTLLSLTSTIVEVGSKLAGSLFKGFEKVVVTSAPKISSVFQSLLDTVAPVFESIERSVNKFGDGLSRVYDEHVVPAINSIANAFNGLIDIIQILWENSWQPFAEFLSGVFGVSIETVADLLGGIILEALKLLADTIKLVADGFTAFSDWCKENKEIISVIANVIGTLATAWQGIKFLSWAEQAGGLAGAFELLSGKVSFIVSGIKNLGLALKALTFDKLVSFGETIYLNALYAKDFVVNSGKTIAQLGKTALELGKSALAWTAHTAKMGLATAAEFAHSVAAGVATAATWAFNAALAVLTSPITLVIAAIAALIAIGVLLYQNWDTVVEFAKTAWQGLCDFISGICQAIGEFFSGLWTKLQEIFEPIGQWFGEKFQQGWDAIVNIFSGIGEWFSGVFQGAWDAIVNIFTPIGSWFGQRWADVTSALANIGAWFTDMFQKAWTGLTNIFSKLGSWFGERWNDVTSALSSVSNWFGEMFTNAYNAVKDAFSSIGDFFSGVWDTVKSIFVNAGQMVGEAVGGAFKSAVNAVLGTIENVVNGFIGMINGVLDVVRNLPGLGWIGSVSTVSLPRLARGGIVDSPTIAMIGEAGKEAVVPLENTGFIQTLGRVVSSAVVNAMAGVGPQGGFSGDGDIVIQIAGHEFGRVAIQEINKEHERAGQTLLKI*	hallmark_hmm	common_virus	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0003	shell	direct	high	3108	0.998	GCA_013277355.1_01122
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	5155	5718	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	5156	5719	GCA_013277355_1_42_4	GCA_013277355_1_42_4	-	19434	.	PFAM:PF04582.11	tail-length-tape-measure-protein	MATLDELKVMIDAEIAPFRKKMKEVENQVKGTSDQVKNATAKVREQSSSIGSAFGKLAKFAGFAILGKKLLDVGMYSTQTALEVSAAMNQIKRQMGESSQSFLKWVNDNANAMNMGVGEATNYGAVYSNLFSGFIKDTNKLSAYTAKMLQTSAVVAEGSGRTITDVMERIRSGLLGNTEAIDFCRTA*	phrogs_hmm	hypothetical_protein	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0004	shell	direct	high	563	0.998	GCA_013277355.1_01123
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	5705	6055	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	5706	6056	GCA_013277355_1_42_5	GCA_013277355_1_42_5	-	19434	.	.	hypothetical protein	MFLDIGGKPLDFWDLTVLEIREMIESYNRVKIQERKEKIIDSYRLSQMISNHVSLFLSKDAKVFEFWEYAPELFVEEQQAVEQERQRQELLLHKERMRDFAERHNRKRKEEMNGNS*	.	hypothetical_protein	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0005	shell	direct	high	350	0.997	GCA_013277355.1_01124
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	6094	6474	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	6095	6475	GCA_013277355_1_42_6	GCA_013277355_1_42_6	-	19434	.	PFAM:PF12363.7	tail-assembly-chaperone-protein	MALPYSIWKISDEKELKLRLSSHQAAKVEEKIGMNLLKIFMPEAGEEFPLPPLKVVLLLIHGALQKYENGYSLEDVYDLYDEYVDNGGDQTTFMTEVLMPLFEVSGFTPRGSKGKKTSKKKMTVVE*	hallmark_hmm	common_virus	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0006	shell	direct	high	380	0.997	GCA_013277355.1_01125
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	6479	6892	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	6480	6893	GCA_013277355_1_42_7	GCA_013277355_1_42_7	-	19434	.	PFAM:PF16463.4	tail-tube-protein	MLANGITLSYSETKGSYTKLVGLKEVPEFGIEPEKVENTTLEDKVKKYEFGIGDAGELEYKFSYNNSSETAPYRVLRKAADDKKKLYFEQAYPDGTKVNFEGQVSVKLGGGGVNAVIEFTLKIALQSELEFTDGLGG*	hallmark_hmm	common_virus	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0007	shell	direct	high	413	0.998	GCA_013277355.1_01126
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	6895	7263	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	6896	7264	GCA_013277355_1_42_8	GCA_013277355_1_42_8	-	19434	.	PFAM:PF05657.10	tail-component	MINIKPVIYKELQKVADNVTDTYPSDWETFPVVIFLEEQNKPGDWFDDQEQKSSIRYKVDIFDDTSTSELAVKINQIFESLGLRRTDCQDVPDPSHLRHKVMRFEGVVDLHSELVFQFRMEN*	hallmark_hmm	common_virus	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0008	shell	direct	high	368	0.997	GCA_013277355.1_01127
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	7260	7775	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	7261	7776	GCA_013277355_1_42_9	GCA_013277355_1_42_9	-	19434	.	PFAM:PF04883.11	putative-tail-component	MSELRGADRLIAKCRRLASKKTGEDIVLRAVHNAAIKVVQADAKRLAPGNNGELRNSIKTRVKMDGDKAIGEVYTNLHYAPYVEFGTGPKGQASHSGISPEVSVTYKSNPWYVHEDQINVGPYHFQKIGEFYKMYGQPAQPYLYPALRDNQERVSKNISDYVRRKVREQIK*	hallmark_hmm	common_virus	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0009	shell	direct	high	515	0.998	GCA_013277355.1_01128
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	7750	8088	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	7751	8089	GCA_013277355_1_42_10	GCA_013277355_1_42_10	-	19434	.	PDB:2KX4_A	head-closure-knob	MFLKQSRLKPYPMRRFEKTVTEEGVVKEGYAKEAETVRLELWPASSKLQSEMYGERVNDILNANANKSATIKVKDGVCIDSPTEVTHRVISKKVYTYHQVLELERVRATRGR*	hallmark_hmm	common_virus	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0010	shell	direct	high	338	0.997	GCA_013277355.1_01129
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	8069	8380	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	8070	8381	GCA_013277355_1_42_11	GCA_013277355_1_42_11	-	19434	.	PFAM:PF05135.12	head-tail-adaptor	MSIELLKKLTGEEDTQLLMLLQTRSTNLILSETNRTSLTPALSRLIPEVAIELHNRSGAEGEHSRTEGGIAVVYGENGLSTGLLQRIRMHRLARVAGHVFEAE*	phrogs_hmm	common_virus	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0011	shell	direct	high	311	0.997	GCA_013277355.1_01130
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	8382	8570	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	8383	8571	GCA_013277355_1_42_12	GCA_013277355_1_42_12	-	19434	.	.	hypothetical protein	MKFKIKQDFYDWELNVKRLAGEELEITEERYAELADNFASNGVAISDVLEEILPEPEFLEED*	.	hypothetical_protein	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0012	shell	direct	high	188	0.995	GCA_013277355.1_01131
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	8560	8742	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	8561	8743	GCA_013277355_1_42_13	GCA_013277355_1_42_13	-	19434	.	PFAM:PF09124.9	endonuclease-VII	MSLLLRRHYIQEEQAGQYSDLENKTLEELKNLAKEAGITGAYKLSKAEIVEVLEDLKSEI*	phrogs_hmm	hypothetical_protein	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0013	shell	direct	high	182	0.995	GCA_013277355.1_01132
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	8754	9596	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	8755	9597	GCA_013277355_1_42_14	GCA_013277355_1_42_14	-	19434	.	PDB:4AN5_F	Major-Capsid-protein	MTAGQTKLATMVNPEVMADMVSAKLPKLIKFTPLAYVETALQGQPGNTLTVPAWEYAGDATEVGEGQAISPDKLTTKKTTMTIKKAAKGYEITDEALLSGLGDPLGQATYQLGLAIANKIDDDLVAVAKTATQHVAETPTTLEAIDKALDIFEDEEDAQYVAIINPKDATKLKTDVAKEWTKGSELGANMVVSGTFGEVAGVQIVRSKKVDEGKGFLVKVSPSQTQTDDANKYGAFVIMLKRDVAIETDRDILKKTTVITGDKHYGVYLYDPTRVVKFGE*	hallmark_hmm	common_virus	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0014	shell	direct	high	842	0.999	GCA_013277355.1_01133
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	9602	10171	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	9603	10172	GCA_013277355_1_42_15	GCA_013277355_1_42_15	-	19434	.	PDB:6B0X_d	capsid-scaffolding-protein	MNEETQTVETVEEQKVPAEPAQQPQDEKKYTDADVDAIIDKKFAKWKSEQEAKENEAKKLAKMNADEKQKYQLDQREQELADREKAIARKELTAEAKAMLSERDLPVELVNVVDLTSAETVSQSVAVLQKSWEQAVQKGVQEKLKGGAPMKQAPVDSDGITKEEFARMGYQSRNELYQKNPELYKKLKG*	hallmark_hmm	common_virus	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0015	shell	direct	high	569	0.998	GCA_013277355.1_01134
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	10321	11079	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	10322	11080	GCA_013277355_1_42_16	GCA_013277355_1_42_16	-	19434	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MELQIFKNEQFGEVRTATIDNQIYFNLNDCCQILDLSNPRKTIERLNKDGVTTSDIIDSLGRTQQANFINEANFYKLVFQSRKPEAEKFADWVTSEVLPSIRKHGAYMTDQVAYNITHNKQALADLLLMAGNQLKEKEAVIKHLEAEKAVLSVENTIMKPKADYFDELVDRNLLTSFRETAKQLKIKERKFIDFLMEKKYIYRDKKGKLQPTANKNDGLFEVKETLNEKTQWSGTQTLITPKGRETFRLLFI*	common_virus_hmm	common_virus	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0016	shell	direct	high	758	0.999	GCA_013277355.1_01135
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	11090	11365	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	11091	11366	GCA_013277355_1_42_17	GCA_013277355_1_42_17	-	19434	.	.	hypothetical protein	MAKIELTEEQLTHLGYELADIRRTVEMATNMTETLAWVQLKDETAFKEMSKKFFDTFNEQFGLLHSTLDEIAFILMNSTDKAEILGSKIFN*	.	hypothetical_protein	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0017	shell	direct	high	275	0.996	GCA_013277355.1_01136
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	11481	11660	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	11482	11661	GCA_013277355_1_42_18	GCA_013277355_1_42_18	-	19434	.	PFAM:PF03869.13	transcriptional-repressor	MSPRTGRPKSEKPLNVEVKARIDSELNKHLEDYCLQKKTTRTEVVRKGIKLVLGLEKNK*	phrogs_hmm	hypothetical_protein	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0018	cloud	direct	high	179	0.994	GCA_013277355.1_01137
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	11803	12045	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	11804	12046	GCA_013277355_1_42_19	GCA_013277355_1_42_19	-	19434	.	.	hypothetical protein	MAKIDKQIITMRKIEDGTAMRQYSAVSGECQGIATVDKTTLKYSYTGDDLGQFASFVKDTLTKSIKLGKELPDKFSYGFG*	.	hypothetical_protein	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0019	cloud	direct	high	242	0.996	GCA_013277355.1_01138
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	12032	13495	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	12033	13496	GCA_013277355_1_42_20	GCA_013277355_1_42_20	-	19434	.	PFAM:PF06152.10	minor-capsid-protein	MDKAEKQADQFDKVYQEAKTYLDKEVNKIFDKFQRDYGLSQVDARQVLKNMKDKKNLNELRKVLEARPNAPNIQRLLADLDSPAYSFRMKRLERLSDDLDRMRESIYHSEKTGSDAFYSDLMKDSYYKATFDLQQQTGLAYGFSGLPESEIKHLQSFSWVGDGSTYSTNIWKNTGKLTSSIKDELLMSLMTGRGTRETAQAIAERFNVGQNDARRLVRTESAFFHNQMELLSYEEADIEKYIFVAVLDKRTSRICQEHDNQVYDRDKAVPGVNCPPMHPWCRSTTVGYDEDADYSKLKRRARNPETGKVEYVPADMTYKEWYSKYVAKDGEKVYNQGMDKLDSLVSSGSISEARGDVEKQKSDFAIRYYEQLKNSNRADVVEKMVKSSKLSHSTVSEALEHILDNQYLLWDFEAFEERMMNFYPHYDMAQSFQRLYLGNPKKYDILMLQHESLESYYMNRLKMDYDEAHKRANLKFNYQEASENGED*	hallmark_hmm	common_virus	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0020	cloud	direct	high	1463	0.999	GCA_013277355.1_01139
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	13458	13895	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	13459	13896	GCA_013277355_1_42_21	GCA_013277355_1_42_21	-	19434	.	PDB:5A20_A	Portal-Protein	MGLEMITKTKEANYKRGLRQRIAIFAHYLGMKQIALESHSIVPQFSRGLPKNLLEISQIVNNLEGKVTNRQLISLLPFVEDPDAELEALEEEKKKNMEDMPMFNKDNTKPEDEVEDEESGVLGEEESQSDLPADGQGRKAGRPVR*	hallmark_hmm	common_virus	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0021	shell	direct	high	437	0.998	GCA_013277355.1_01140
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	14125	14658	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	14126	14659	GCA_013277355_1_42_22	GCA_013277355_1_42_22	-	19434	.	PFAM:PF05551.10	homing-endonuclease	MIKDKMHKHLNQVYYSMLARCYDEKHWAYKWYGKRGIGVSDEFSDVAKFRSWAMQNGVEFGLQLDRIDNDKDYSPSNCRWVPEHTNKRNRSDNVKYKGYILRDYLKKLSEENNISFSTLVYRYYRSIKRDDIIVNDETIDDILLNYKKYDLRQFSKGVDMSGKTIVRDEKGRFVTYY*	common_virus_hmm	common_virus	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0022	shell	direct	high	533	0.998	GCA_013277355.1_01141
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	14787	15806	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	14788	15807	GCA_013277355_1_42_23	GCA_013277355_1_42_23	-	19434	.	PDB:5A20_A	Portal-Protein	MYQYLTYPRDGYDEGSLKKDLIYKLITIHNTESSHLKKLKSYYLGEHAILEHTRRNVNAPNYKTVANHAKDIADTATGYFMGNPIKYNNTAEGDIDELLTAFDGAEIDQVDAQNALNMAIYGRAYEYIYAKEGLTELDSTSIDPENTFMVYDDSIERKPLFAVYYYKVEDDTKDTTKYQAEVFTENLHYHMVLRSTDSGTTQNEQVTPHNLGQIPIIEYRNNHFAIGDYEQQISLIDAYNSLMGNRVNDKEQAVESILVLYGTQLADTPEDAKVAMKILSEEGLLELPGDSARAEFLKNTLDESATEILRTALKEDIYTFSHVPNLTDENFAGNTSGVK*	hallmark_hmm	common_virus	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0023	shell	direct	high	1019	0.999	GCA_013277355.1_01142
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	15818	17035	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	15819	17036	GCA_013277355_1_42_24	GCA_013277355_1_42_24	-	19434	.	PDB:5OEA_B	Large-Terminase	MTTNKFTKRQEEVLTRVLNDDFFICGLHGAKRSGKTVLNNMVFMNEIARVRETADRLNIDEPMYILAGTSSTSIQNNIIQELYNMFDIEPKYDKHGAFTLCGVKVVPVYTGSISGLKRARGFTAFGAYVNEASLANEQVFKEIISRCSGEGARIVWDSNPDIPTHWLRRDYINSGDDMIIDFHFKLDDNTFMSDRYRENIKSATPAGVFYDRDILGLWVTGEGVVYRDFSENMFVDNVPEDITKVYAGVDWGYEHFGSIVVIGETSDGSVYLLEEHAHQYKEIDFWVDLAKNIKERYGNITFWADSARPEHVARFQREQLKTFNANKAVLSGIEEVAKLMKTGRFFVVSNKVSKFKDEVYQYIWNEKTGEPVKENDDVLDAVRYAIYSQHSQPKATVRRRSDYGL*	hallmark_hmm	common_virus	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0024	shell	direct	high	1217	0.999	GCA_013277355.1_01143
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	17022	17549	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	17023	17550	GCA_013277355_1_42_25	GCA_013277355_1_42_25	-	19434	.	PFAM:PF03592.15	Terminase-small-subunit	MWLFLIIRKVVMDIGLNQRQKMFASEYLRTGNVYQSAIFAGYSEAYAKTTASKLLENASVKTFIQTETEKMHDENILSAKEALSILSDIARGQRLEEVLMMNPVTGEVDRVTKKADNNTVIKAIAEILKRYPTAKQAEKLELEIEKLKSQIGVDNEQDDKLIEFAKALRGAFDDK*	hallmark_hmm	common_virus	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0025	shell	direct	moderate	495	0.938	GCA_013277355.1_01144
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	18006	18452	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	18007	18453	GCA_013277355_1_42_26	GCA_013277355_1_42_26	-	19434	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MRLLKSVDVQFTKKNVYDVLESYRSYVRMAGAEYLPKITTTYSFEPKTFTGKNTATENMVIEHVDAEAEVLEIERAVNCIMDPYVRQVITKKYMDMKIQLSDKAIYMDLGYSESEFYRMLSRGALEFAEAYRKGKLIVYRKILGDICK*	mmseqs_cdd	common_virus	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0026	shell	direct	high	446	0.998	GCA_013277355.1_01145
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	18582	18797	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	18583	18798	GCA_013277355_1_42_27	GCA_013277355_1_42_27	+	19434	.	PFAM:PF04014.17	transcriptional-regulator	MNTVKTRKVGNSVTVTIPKTLNVPEGQEMFVYKGVDNVIVLAPKIPDPFNGDADLRMEDDFEGVKFLDSEI*	phrogs_hmm	hypothetical_protein	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0027	shell	direct	high	215	0.995	GCA_013277355.1_01146
GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote	cenote	CDS	19155	19391	GCA_013277355.1	VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355.1_VMMT01000004.1	GCA_013277355.1|VMMT01000004.1	GCA_013277355_1_42	GCA_013277355_1_42@C0	19156	19392	GCA_013277355_1_42_28	GCA_013277355_1_42_28	-	19434	.	PFAM:PF11753.7	nucelotide-kinase	MNPEIIDNINKPSHYQGANGLEAIDVVHNFVGNLSGASAFFWGNAIKYMLRFQKKNGLEDLKKARKNLDWLIEELEKN*	common_virus_hmm	common_virus	C0	19435	0	19435	GCA_013277355.1|VMMT01000004.1@region_1_19435@tool_cenote_CDS_0028	shell	direct	high	236	0.996	GCA_013277355.1_01147
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	32	211	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	33	212	GCA_013277355_1_62_1	GCA_013277355_1_62_1	+	17563	.	.	hypothetical protein	MPDVEWIMENCHMMRDNGIWAGEKQISYASPDGQYTYYVNKRKDGTYYLHGAYKHYGRT*	.	hypothetical_protein	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0001	shell	direct	high	179	0.994	GCA_013277355.1_01590
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	198	710	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	199	711	GCA_013277355_1_62_2	GCA_013277355_1_62_2	+	17563	.	PFAM:PF13921.5	transcriptional-regulator,-D5-like	MAGRRWTEDEVDYILLAHNDNESTVEEVADFLGRTVSSVRCKSEIINKGKGQFTKRHWQDEEIRILRRYYQKVQDLNQLAKILNRSLDAVIIKANRLGLPRRKKKWDISKYDIETLGKMGMSCRQIACQLDRPLRLIRAVVYHYKIPVGKEEIQQHPWSFDNDMIFMRRT*	phrogs_hmm	hypothetical_protein	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0002	shell	direct	high	512	0.998	GCA_013277355.1_01591
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	712	825	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	713	826	GCA_013277355_1_62_3	GCA_013277355_1_62_3	+	17563	.	PFAM:PF11753.7	kinase	MTDNINKPSHYQGANGLEDLKKARKNLDWLIEEMEHE*	phrogs_hmm	hypothetical_protein	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0003	shell	direct	high	113	0.991	GCA_013277355.1_01592
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	818	997	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	819	998	GCA_013277355_1_62_4	GCA_013277355_1_62_4	+	17563	.	PFAM:PF04936.11	host-nuclease-inhibitor	MNEYALYQGETFVTIGTLEEISKETGIAERMLKYYTFASTQKRHPNGRAVIKIEVDDEG*	phrogs_hmm	hypothetical_protein	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0004	shell	direct	high	179	0.994	GCA_013277355.1_01593
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	987	1217	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	988	1218	GCA_013277355_1_62_5	GCA_013277355_1_62_5	+	17563	.	PDB:2FJR_A	Repressor-protein-CI	MKDKLNPRQASRFAFLLKQKRKERKLSQEKLAAKLGYSRYLIAKWEKEESVPNIYNVEDICTYFAFPADIILGSRA*	common_virus_hmm	common_virus	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0005	shell	direct	high	230	0.996	GCA_013277355.1_01594
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	1288	1716	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	1289	1717	GCA_013277355_1_62_6	GCA_013277355_1_62_6	+	17563	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MQIELLDIIDEKKTRKEAIKVLKKYSRLRRIAGEEYAPKITISYSLEPKSSSGQTSKQVESMVLRRVSAQQDLELIAKAINNLSDMEYTRILIERYCRKKRREDYSIYSELGYSSSEYYRILNKALLEFAESYQASNLLVYK*	mmseqs_cdd	common_virus	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0006	persistent	direct	high	428	0.998	GCA_013277355.1_01595
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	2016	2558	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	2017	2559	GCA_013277355_1_62_7	GCA_013277355_1_62_7	+	17563	.	CDD:cd01192	site-specific-tyrosine-recombinase	MNIVEPIRDKDDIQAMKDYLREWNERNYILFLFGINSGLRVGDILKIRVKDVQGWYIKLKEQKTGKKKKIKMTKTLKREVREYIQNKPHHHFLFQSRVGKNKPLDRRTVDWILKVAASECGIENIGTHSMRKTFGYHYYKKTKDIAMLMSLFNHSSPAITLRYIGIRQDQQDKAMSNFGL*	common_virus_hmm	common_virus	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0007	shell	direct	moderate	497	0.915	GCA_013277355.1_01596
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	2772	3068	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	2773	3069	GCA_013277355_1_62_8	GCA_013277355_1_62_8	+	17563	.	PDB:5H0M_A	HNH-endonuclease	MIEVSTREERNQFYNSSEWRTIRRQALKRDHYECVWCRDEGKVTTTNLEVDHIKELEFYPEFALDIDNLRTLCKACHNKRHDRFDKNDRNFRKDEWWG*	common_virus_hmm	common_virus	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0008	.	unmatched_CDS	none	0	0	.
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	3186	3524	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	3187	3525	GCA_013277355_1_62_9	GCA_013277355_1_62_9	+	17563	.	PFAM:PF05119.11	Small-Terminase	MEEYSEKNIKELENQLLSKIGYFSPRKKDAIQYEKVNRYLYLVRLLYELKAKLHEDGLVITVHNGQQRFQKANSLIKEINTTSNQLLAIERSFDFDVENSPVEKATSGSDLL*	hallmark_hmm	common_virus	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0009	shell	direct	high	338	0.997	GCA_013277355.1_01597
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	3521	5161	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	3522	5162	GCA_013277355_1_62_10	GCA_013277355_1_62_10	+	17563	.	PFAM:PF03354.14	Large-Terminase	MISHPLVDDYIKMAENGEVVVNKERKLLFKIIKEKIYPRDDLYFDNDLIDKFIRFAEKNFFPLAKYQLFLTPFIFLFRKVDEEPHFDEYLYTLARGGGKNGFMSARSSFFISPIYPIRDYDVTITANSEKQGKVSFEEVYETIQRRGLEDHFYLTKMSITGRANNSVFSFRTNNPKTMDSARDGCLEFDEIHQFENDKAVKVQRSGLGKIAHVRTFYNGTNGYVREGFYDKLIEKSMQILNGEVDDFRLFPFICKLDSADEVDDMKNWPKANPMLDESTPYAKRLLARTKADYDDLELEPSGRQEFMTKRMNLPEADLEKDVTTRERLLACLRSPGIDLLGKSCVAGFDYASIRDFASVGLLFKNGDEFIWKQHSFARKAFLKAFKLKAPIQEWADRGLFTIVDGPSIDPRLLVEKLNEWSKFYQIELVCADGFRMDLLKPLLEEAGFEYEFLRNPGAIQSKVAPIIEDGFANERFIFENDNSMIWYTDNTYVKEDKDGNKRFLKKEPVRRKTDGFHALIAALYKRELVHESNVGEFLDMLEDWEF*	hallmark_hmm	common_virus	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0010	shell	direct	high	1640	0.999	GCA_013277355.1_01598
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	5217	6365	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	5218	6366	GCA_013277355_1_62_11	GCA_013277355_1_62_11	+	17563	.	PFAM:PF04860.11	Portal-protein	MGFLNLFKRDAPDVVFDFEELERMLGCLQLKSLAIDKSAEFVARIFAKSEFRYMVENHHVTSDWDYILNVRPNKNESASEFWQKVIYRLLTKNEVLIVLSDDKQLLVADAFTRRRYALYDDTFEMVSVGDYTFQRKFAMSDVIFLQYNNNRLQEYVSDLFSDYEKLHTRLVEALARNNQIRGVLATKANGTFDEDKRKKLQRYADNLFKSFTSKTVAIVPTMDGVEYSELTNTVGTTNLSVEELKKLRRQFDDEVADILGLPTALMHGDMADLSNSQKMFNSYCYESLVKKVGDALNHAMVSSAGYANQKKFVIFGEGGLDKFALAENIDKLISSGAMTRNEVRLELGLEAVPGGDSFLITKNYQGENEIEKGGNEDDNHSD*	hallmark_hmm	common_virus	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0011	shell	direct	high	1148	0.999	GCA_013277355.1_01599
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	6346	7068	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	6347	7069	GCA_013277355_1_62_12	GCA_013277355_1_62_12	+	17563	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MTIIQIKGAIVSNDDRWFYDWLDMDATAPKDIVLPTTGEDVEVHINSGGGDVYAGSEIYTALRAYQGHVTVKIVGIAASAASVIAMAGDQVEISPTAQIMIHNVSAGVRGDHKALLHEAGVLEGFNKSIAYAYIDKTGKALDDLLDLMEGETWFDARSAVNHGFADKVMFESQEAPVLVASQTPVIPRDFIEKIRSAMTPDVELLADLVRDRLNNSLPIPEDKKKEDKTAEPVGLGRFPF*	common_virus_hmm	common_virus	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0012	shell	direct	high	722	0.999	GCA_013277355.1_01600
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	7087	8202	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	7088	8203	GCA_013277355_1_62_13	GCA_013277355_1_62_13	+	17563	.	PFAM:PF06673.10	Major-Capsid-protein	MMKLGNEFTTARQNFMNAVETGAPMEEQNKLYNEMIEALTDKLQDDAREAARKEIATMNPYDAQLTAEAREFFNNIEKLPPKGIEKLFPQETIDRIFEDMVAARPLLQHIGLRNAGIRLKFLKSSRTGQAVWGKINAEIQGQLKQEFAEEEAIQSKLTAFVVIPKDSEKFGPAWLQSYVSIQITEAFAAALEAGYLNGDGDNKPIGLSRTLTGTAESEKVTYAEKQAQKKPLTFADSATVVKELTEVYKYHSTKADNTTPVAVEGNLVMVVNPVDAWDVKKQYTSLNAQGVYVTAMPYNLILVESVAQASGKVTTFVKGRYDAFVGGGIEFGRFTETYALEDLNLYTAKQFAYGKAHDEKTAAVWTLNIGK*	hallmark_hmm	common_virus	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0013	shell	direct	high	1115	0.999	GCA_013277355.1_01601
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	8216	8506	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	8217	8507	GCA_013277355_1_62_14	GCA_013277355_1_62_14	+	17563	.	CDD:cd08054	Head-Tail-Connector-Protein	MEIEAKLHSLLDPFKERMRIFHSGEDANLSRMLESSQMVITRLVGSGNIHDHQIRELILERARYVYNDQVEFFYENFKADILALSLDKIEMEDSDD*	hallmark_hmm	common_virus	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0014	shell	direct	high	290	0.997	GCA_013277355.1_01602
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	8499	8687	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	8500	8688	GCA_013277355_1_62_15	GCA_013277355_1_62_15	+	17563	.	.	hypothetical protein	MIKVLKEFYDLKEGVLRQVGERFEATEERFAELKEHLPDYVELEKSSRSRSSKEVVSVNEEE*	.	hypothetical_protein	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0015	shell	direct	high	188	0.995	GCA_013277355.1_01603
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	8674	9063	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	8675	9064	GCA_013277355_1_62_16	GCA_013277355_1_62_16	+	17563	.	PDB:2KZ4_A	head-closure-knob	MKRSEGPSYRYKKPESQNGDLRTPLTFYTSKIKKGVDGRDVSYEKAFYTMGQTYSPSMKDVEIATGKAMKAKMTLKIRDPLTDYQPENRHFVEVGDIRLVGKKWQIIDVRPDFANRDFLIVLIGGGRDV*	hallmark_hmm	common_virus	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0016	shell	direct	high	389	0.997	GCA_013277355.1_01604
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	9056	9454	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	9057	9455	GCA_013277355_1_62_17	GCA_013277355_1_62_17	+	17563	.	PFAM:PF04883.11	tail-component	MSSGANLKGFDDILRNIEARLGEPVIRRKVNRALKETVEEFEPTFKRAMAVYADTGKTVGAVVHGNVTGTSSGVPMVKLGFKSPRWTIIHLNEFGYAKNGHPRGFGVMRRFFEASKPVFKSKVGMKLKQEFL*	hallmark_hmm	common_virus	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0017	shell	direct	high	398	0.997	GCA_013277355.1_01605
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	9454	9834	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	9455	9835	GCA_013277355_1_62_18	GCA_013277355_1_62_18	+	17563	.	PFAM:PF05657.10	tail-component	MIKDKLTELYDALEEDESLSGISIKSFERPESLGDGETSIVIIPVGPPMQTAHGSNTSLAKTFLYQINVESTNRVECKELQGRIEKIMEEQGFYQTEGGLEQWIPDIKRYVDVRTYRGMSALYEKY*	hallmark_hmm	common_virus	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0018	shell	direct	high	380	0.997	GCA_013277355.1_01606
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	9851	10447	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	9852	10448	GCA_013277355_1_62_19	GCA_013277355_1_62_19	+	17563	.	PFAM:PF04630.11	major-tail-protein	MTVKGTALIGLKSVTIRVHDGQTPTVGQNLFTLEGKDNEGATQTARVTGLSSDPVKTYGSNVAYHVSNRGVGDVKVEMGLLDVPLALYTNALGYGDDDGIYYFGADTVAKNVSILIESNTADGEPVYYGFYKGQLSMDAIDFETLKDKANELATTSVNFTATASSDVATKGRYGAIVYGSDAEKLKKLKGQLNITAAG*	hallmark_hmm	common_virus	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0019	shell	direct	high	596	0.998	GCA_013277355.1_01607
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	10493	10786	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	10494	10787	GCA_013277355_1_62_20	GCA_013277355_1_62_20	+	17563	.	.	hypothetical protein	MAKVQFTIKNDKGEDVLKKSKEITTRDYRDYLVMNESLTSDLSEVEKLDKQLGFIASLFDDVTVEQLLEYTDFAKVISIFTAIYAHLVGDVDPKEKS*	.	hypothetical_protein	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0020	shell	direct	high	293	0.997	GCA_013277355.1_01608
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	11035	11265	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	11036	11266	GCA_013277355_1_62_21	GCA_013277355_1_62_21	+	17563	.	.	hypothetical protein	MSRKEKACRRYWFWFTIFILYLAFGLYCICTNFVDIFGMLLLSPFIFASLPLYAYLFLGMFIWAFMNMAMDDFYKE*	.	hypothetical_protein	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0021	shell	direct	high	230	0.996	GCA_013277355.1_01610
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	11322	15497	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	11323	15498	GCA_013277355_1_62_22	GCA_013277355_1_62_22	+	17563	.	PFAM:PF10145.8	minor-tail-protein	MASGTPLGQMYIELGLDVSKFSPTLTGAKNAVKYFQNNVRSLDSTLKGNEKNASLLQAKYKTLGQAIDSQRKVLDEMKKSFDKLEPGTAKFDKAAADIQRENAKLAVMEGQLRGVEKALQDVGRENSWSGKMDTLSENFAKGGEKLRAMGDAMKPVSAALLAGFTLSTKKAIDFESQMNTTKSLLADTIPTADELNSTTQKLGESSKNWAKQYGISTASINEGMQEIIKKGFDANQTIEAMPAILDAAKASGEDFNTVMNATTNILQQFGLSTQDTERVTNSLTFVANKTAAGFADMGAAMEYVGPVAKNVGMNLEETAAAVGLLSNNGIAGEKAGTALRGALTRLLKPSEQNANAMEKLGFSAEEFRSGAIKLPDILDRIKKNTEGMTDAQKSALIATAFGTEAQTAMNILVDQGGDALRNLANETKGATTYTKDLANELSKSSKNGVERFKSSLEVLQINIGQKLLPLLTPVIDKVNQFIDWLSKAPPAVQSLAVGIGGFLALGYPLLNFLGNGATALSILIKHAGKLEGLLKGGLGLAKLTERAGKLKGLLQGGLGLAKVGSEATVLAEGAGAAASSSSLLSGAIGALTNPIGLLVGGAALLAGGLVYLGHKKDEARIKAEEFGSQLSDTARKELRDFQSKVDDTSTAVANFGTHAGDAEKVSEAFRKLHEEVAAGAEKANQRMEELAKKLGFSDEEIAKMKVKNDQVVSNTDAMANQVSEIYKRHNGDASKFSQEEKEIVLNNQREMIKARIEMMELSGEQQKAALQALNGEIGSLNETQLKHTRDVLKKALDEENQLYKTSKDGLKQLLDAKRIDQETYNKKIQELETNHQQTMEALGTKYYQVMQNLDAKVKARTGQSWNYWEEAKKVLEEYGLSYEVIGQKAAEASQKMGDSHSILAKYTSDMSKETREANDAWSLLVGNIDENNNFVIKSNVKEVIGEATKSAEGWEQLQFIVKNANINSNARVTIAEALVESGKWSTMTLEEKQLIVQNQAGLQAIFDSENHLRIWNSMPAEVKQLLLENTDVMNKAEEASKALYNYDALTPKQKELLATDENFRKAVARSTDTLTTWNATTPFTKDLKLDPTNVLNNGQLSIDKIMAWNLSNPENKSLNATDNTSEAVASAKASVNSPKQEKPIDLLAKDQTAGVRNETSAAINAIKQHNPVDILAKNSTSSTVSEVKSVVNSIQDKTVTINAQDNASGVLAGIRTWITRVTGDFFTNVFASRHAHGTNYHPGGLAMVNDQRNSTYKELVTLPDGRSFIPEGRDVLLPLPKGAKVLRADKTKRLMREMGVPKYAAGVGIPSDAKFLREMEEAQAKIVVQTKGDTNSKDSDKVVSEIAILRASMEKILTAILEKPSDTYLDADKISMSVYQRQGAIYAREGM*	hallmark_hmm	common_virus	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0022	shell	direct	high	4175	1.0	GCA_013277355.1_01611
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	15497	16195	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	15498	16196	GCA_013277355_1_62_23	GCA_013277355_1_62_23	+	17563	.	PDB:2X8K_A	Distal-Tail-Protein	MFYMIINGFNTSTIPHCVVTDFGQVEAAKPRVVEDANLYGANGSYRVLDGGYESYERTFSFYIPKLLDVSTIVEKFQPKDNVLEFSYQLGSVFYADFIGATYSPHGMHAWKLELKLSMQPFRYQKNLAPLIFTASGNVNNPGSVYSEPVIEIEGDGDISLTIGRTTMHLTIRRKVTIDCRHKKQNIYNADGAVQNTLRKRGGFFELAVGNNGLVFTGAVRKVTVRPNWRYIL*	hallmark_hmm	common_virus	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0023	persistent	direct	high	698	0.999	GCA_013277355.1_01612
GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote	cenote	CDS	16192	17562	GCA_013277355.1	VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355.1_VMMT01000058.1	GCA_013277355.1|VMMT01000058.1	GCA_013277355_1_62	GCA_013277355_1_62@C0	16193	17563	GCA_013277355_1_62_24	GCA_013277355_1_62_24	+	17563	.	PDB:3GUD_A	Neck-appendage-protein	MIYLTEGNRPLNEAYNDEIVHFGNNTYQLTFRFPTSDPKWELLKEETFLTADDLHGEQDFYIFEVEKQQGYIQVYANQVISLLNNYIVSSIEVDRVSGTRVLSAFAGSITRANPFSFFSDIDDRHTLNIKDKNAMEVLAKDKHSILGQWGGDMVRNGYNLRLLKNGGSENESLFMYKKNLSSYQHKTSTKSLKTRITFKTTVKGEGENAVDHDYMVVIDSPLLGNYSQIYEDVVEVNDQDVTDEASLIEYGKQYFRTSMCDMLEDSLEISVVGQSDVAVRMFDVVSIYHEWYGLDVRKKITKYTYSPMAKRLKSIGFGTFQSSLANAIGGIVNDAVLNESRNLHQIFEERLKKEIANADRAFDAEFTKREKAITDAIELAKAKAEEVKQEVSDTINQRFNSFYDEPLRESRRKAEEALRQAGASSSLAQEAKRIGLDSVARLEAFKSQTRNAQTALS	hallmark_hmm	common_virus	C0	17564	0	17564	GCA_013277355.1|VMMT01000058.1@region_1_17564@tool_cenote_CDS_0024	persistent	ambiguous	low	5	0.004	GCA_013277355.1_01612