core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote	cenote	CDS	1152615	1152827	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C48	1	213	GCA_013425995_1_1_1016	GCA_013425995_1_1_1016	-	4315383	.	PRK11507	ribosome-associated protein YbcJ. 	MATFSLGKHPHVELCDLLKLEGWSESGAQAKIVISEGLVTVDGAVETRKRCKIVAGQTVSFDGQSVTVTA*	mmseqs_cdd	nonviral_gene	C48	9998	1152615	1162613	GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote_CDS_0001	persistent	direct	high	212	0.995	GCA_013425995.1_01082
GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote	cenote	CDS	1152829	1153821	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C48	215	1207	GCA_013425995_1_1_1017	GCA_013425995_1_1_1017	-	4315383	.	PRK10792	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD. 	MAFEPPAGQLSERHKRKLTARRASDRISSSPLLLITDGIFSLMAAKIIDGKTIAQQVRLEVAEKVKARVAAGKRAPGLAVVLVGANPASQIYVGSKRKACEEVGFVSRSYDLPETTSEAELLALIDELNADAAIDGILVQLPLPAGIDNVKVLERIAPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTYGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRQHVENADLLIVAVGKPGFIPGEWIKEGAIVIDVGINRLENGKVVGDVVFEEAAKRASYITPVPGGVGPMTVATLIQNTLQACVEYHDGEEA*	mmseqs_cdd	nonviral_gene	C48	9998	1152615	1162613	GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote_CDS_0002	persistent	direct	moderate	867	0.873	GCA_013425995.1_01083
GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote	cenote	CDS	1153996	1155159	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C48	1382	2545	GCA_013425995_1_1_1018	GCA_013425995_1_1_1018	-	4315383	.	PDB:1Z19_B	Integrase	MSLFRRGEIWYASYSLPGGKRIKESLGTADKRQAQELHDRRKSELWRVDRLGDFPDVTFEEACLRWLEEKADKKSLDTDKGRMGFWLEHFEGMKLKDITEAKIYTAVSKMQNRKAKEIWIQKCAAAERKGKEFPVFEGRPVTTSTKAKHLALMKAILRAAERDWKWLEKAPVIKIPQVRNKRVRWLEPEEAERLINECPEPLKSVVRFALATGLRRSNIINLEWQQIDMQRRVAWVNPEDSKSNRAIGVALNDTACRVLREQIGNHHKWVFVHTKAGNRPDGTVTDQVRKMRVDDQRAWNSACRRAGIEDFRFHDLRHTWASWLIQAGVPLSVLQEMGGWESIEMVRRYAHLAPNHLTEHARQIDSILGFCVPNMSHTGNKEDLKEA*	common_virus_hmm	common_virus	C48	9998	1152615	1162613	GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote_CDS_0003	cloud	direct	high	1163	0.999	GCA_013425995.1_01085
GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote	cenote	CDS	1155386	1155739	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C48	2772	3125	GCA_013425995_1_1_1019	GCA_013425995_1_1_1019	-	4315383	.	.	hypothetical protein	MSYCRFSSDNWRSDVYCYESAQGYITHVASSRIIGDVPALPFFFDVPPADFFEAVRKQNEFIESAEREPIGLDHDGDMFIDKTPDEMIDRLIYLSGKGYFVPVSAIESLSEEIKEGA*	.	hypothetical_protein	C48	9998	1152615	1162613	GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote_CDS_0004	cloud	direct	high	353	0.997	GCA_013425995.1_01086
GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote	cenote	CDS	1155771	1156118	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C48	3157	3504	GCA_013425995_1_1_1020	GCA_013425995_1_1_1020	-	4315383	.	.	hypothetical protein	MSDLAMKVLEWQAKGRVGISSATMASIALGLEKNFYHGRFDAPSDPADLHRCMLLVEDIPEIKDSFSAIAKKVKSFSPILREWDRLTGLLKEELKRPDGRAPETYALMQELLKAA*	.	hypothetical_protein	C48	9998	1152615	1162613	GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote_CDS_0005	shell	direct	high	347	0.997	GCA_013425995.1_01087
GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote	cenote	CDS	1156153	1156407	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C48	3539	3793	GCA_013425995_1_1_1021	GCA_013425995_1_1_1021	-	4315383	.	.	hypothetical protein	MSKDSDYLIIYRGEIHHRITPGRWVLIQRAKEYGGGWWLGKAYDDVFMLEFERPTSMAVASEYIMSHRRMSTFPPWDDNFELTQ*	.	hypothetical_protein	C48	9998	1152615	1162613	GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote_CDS_0006	persistent	direct	high	254	0.996	GCA_013425995.1_01088
GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote	cenote	CDS	1156497	1156709	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C48	3883	4095	GCA_013425995_1_1_1022	GCA_013425995_1_1_1022	-	4315383	.	.	hypothetical protein	MDWINKYAWYGRKAASSVLPFILGIIAEQRAPDYALWFTIPVIIFFGWARKTRAANDVWFRGNRGPIDDD*	.	hypothetical_protein	C48	9998	1152615	1162613	GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote_CDS_0007	.	unmatched_CDS	none	0	0	.
GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote	cenote	CDS	1156709	1157311	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C48	4095	4697	GCA_013425995_1_1_1023	GCA_013425995_1_1_1023	-	4315383	.	pfam12961	Domain of Unknown Function with PDB structure (DUF3850). The search results from NCBI sequence alignment indicates a conserved domain belonging to ASCH superfamily. Dali searching results show that the protein is a structurally similar to the PUA domain, suggesting it may be involved in RNA recognition. It has been reported that the deletion of PUA genes results in impaired growth (RluD) and competitive disadvantage (TruB) in Escherichia coli. Suggestions have been put forward that, apart from their usual catalytic role, certain PUS enzymes (e.g. TruB) may also act as chaperones for RNA folding. The interface interaction indicates that the biomolecule of protein NP_809782.1 should be a dimer.	MSEIREPVTHNLKILPENYSAVCAGVKRAELRKNDRDYRAGDTLDLCEWDKDDESFTGNYISVTVTHVADVSEWMPGYVLLSIELALRERAEPVYQVQAMDWHDVEKYLYDEALDRGIRCRVIYTAPPAPVAAGWIAFSERMPELDTRVLLYFPDYGGHIEDGCIGDEGDGHYHYFFDGYSLRHEPTHWMPLPEAPGKEG*	mmseqs_cdd	common_virus	C48	9998	1152615	1162613	GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote_CDS_0008	cloud	direct	high	602	0.998	GCA_013425995.1_01089
GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote	cenote	CDS	1157511	1158020	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C48	4897	5406	GCA_013425995_1_1_1024	GCA_013425995_1_1_1024	+	4315383	.	CDD:cd16900	endolysin-R21-like-protein	MSPLLTPCQNLFGLPYIRVARNHHFRLVASAKDGVEGRKYQAYKDVAGVWTVCDGHTGNDIIRGKTYTDKECDRLLWKDLQPAKATVDKLVKVPLSEYQRASLYSFVFNVGSDAFAKSTLLRKLNKGDQEGACEEMRRWVYAGGMKWKGLQNRREMERSMCLAESENDL*	common_virus_hmm	common_virus	C48	9998	1152615	1162613	GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote_CDS_0009	cloud	direct	high	509	0.998	GCA_013425995.1_01090
GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote	cenote	CDS	1158010	1158474	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C48	5396	5860	GCA_013425995_1_1_1025	GCA_013425995_1_1_1025	+	4315383	.	pfam03245	Bacteriophage Rz lysis protein. This protein is involved in host lysis. This family is not considered to be a peptidase according to the MEROPs database. This family Rz and the Rz1 protein (pfam06085) represent a unique example of two genes located in different reading frames in the same nucleotide sequence, which encode different proteins that are both required in the same physiological pathway.	MTFKWKLILFAAMSLLLAIAIVIASHYRSALKESQASLTKVNRELNLAKDTISDMQTRQRDVAALDAKYTQELADAQATIDQLHDDVASGKRRLQLHATCTKQSASGTASLDDAASPGLTDSAERDYFTLRERIETVTRQLSGLQAYVREQCLR*	mmseqs_cdd	common_virus	C48	9998	1152615	1162613	GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote_CDS_0010	shell	direct	high	464	0.998	GCA_013425995.1_01091
GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote	cenote	CDS	1158831	1159067	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C48	6217	6453	GCA_013425995_1_1_1026	GCA_013425995_1_1_1026	+	4315383	.	.	hypothetical protein	MMALEKYNGQEIMADIYRITVKTKTGETHEGLMKRSQPEIINGFIGVAREDGSWVYLAPDNVQEMEYVPEPEVEEQTS*	.	hypothetical_protein	C48	9998	1152615	1162613	GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote_CDS_0011	cloud	direct	high	236	0.996	GCA_013425995.1_01092
GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote	cenote	CDS	1159077	1159523	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C48	6463	6909	GCA_013425995_1_1_1027	GCA_013425995_1_1_1027	+	4315383	.	PFAM:PF03592.15	Terminase-small-subunit	MATESKTGRPSDYLPEVAADICSLLADGESLRKVCERPGMPNKSTVFRWLAQHEEFRDQYAKATETRADAIFEEMFDIADTVAEEAAAVGKARLRIDTRKWALARMNPKKYGDKVSQEIDHKSSDGTMATKPTTIRLVGVDPDNGKPS*	hallmark_hmm	common_virus	C48	9998	1152615	1162613	GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote_CDS_0012	cloud	direct	high	446	0.998	GCA_013425995.1_01093
GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote	cenote	CDS	1159507	1159938	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C48	6893	7324	GCA_013425995_1_1_1028	GCA_013425995_1_1_1028	+	4315383	.	PDB:5OE8_A	Large-Terminase	MESQVDLQIPAKLVPVFATEGVRYRGAHGGRGSAKTRTFALMTAVRAYQAAEANISGVILCAREYMNSLEESSMEEVKQAIRSVPWLDDYFDIGEKYIRTKNRRVSYVFCGLRHNLDSIKSKARILVAWVDEAESVTRLLHGQ*	hallmark_hmm	common_virus	C48	9998	1152615	1162613	GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote_CDS_0013	cloud	direct	high	431	0.998	GCA_013425995.1_01094
GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote	cenote	CDS	1160070	1160408	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C48	7456	7794	GCA_013425995_1_1_1029	GCA_013425995_1_1_1029	+	4315383	.	PFAM:PF06381.10	portal-protein	MSDFISRVIERFWQIGVIDPPKSGEVTLAWSDLLAPSEKEKIANMQAMAAVAKDTQAAFGTPAITENEIRAVGELEPISEPEEPAGAATTDPLTGEPIEQPTTTGQPDNSAQ*	phrogs_hmm	hypothetical_protein	C48	9998	1152615	1162613	GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote_CDS_0014	cloud	direct	high	338	0.997	GCA_013425995.1_01095
GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote	cenote	CDS	1160446	1160823	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C48	7832	8209	GCA_013425995_1_1_1030	GCA_013425995_1_1_1030	+	4315383	.	PFAM:PF04233.13	minor-capsid-component	MFRDIENRYYQIKKALKQLLDGYLVGRERSGNSLYGYILAREGSKPDTLYQVNAGTFIYDMSPQQLSDLLLRIETILDDYLLEGGNNNLWALQYVSDEYQRGTLQAFTNLSAQSAIYEQSPVAFA*	hallmark_hmm	common_virus	C48	9998	1152615	1162613	GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote_CDS_0015	cloud	direct	high	377	0.997	GCA_013425995.1_01096
GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote	cenote	CDS	1160793	1161605	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C48	8179	8991	GCA_013425995_1_1_1031	GCA_013425995_1_1_1031	-	4315383	.	pfam11397	Glycosyltransferase (GlcNAc). GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1, a ubiquitous eukaryotic protein, in the cytoplasm.	MNHSLSTLFVSIASYRDPELIPTLKDMLQTAAYPERLHISVCWQDDNDIKQFLNQGFTVAFVEGLESGALYKLSFAGVVIDVISLHYYTSQGACWARHMAETRFNNEDYFLQIDSHCRFIENWDQEMINTVEELRSSSSKPVLSTYPPPYDPDNSEDRKRYISRLIFREFTPQGIVMLSSRTVTSPSPLRCGYLAGGFIFADGSFVKEVPNDPHIFFAGEEIAMAARAWTNGYDIYCPHKILLWHFYGRRQHPKVWADHSNQAKATGDCS*	mmseqs_cdd	nonviral_gene	C48	9998	1152615	1162613	GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote_CDS_0016	shell	direct	high	812	0.999	GCA_013425995.1_01097
GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote	cenote	CDS	1161617	1162612	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C48	9003	9998	GCA_013425995_1_1_1032	GCA_013425995_1_1_1032	-	4315383	.	5CYL_C	Fimbrial subunit CupB6	MKKWLSLVSLFVITIVKAQACEVDLSDGVGPTTLSIPSQTITIDAAAQTSTTVPVYSYDSSLQSTRISYINCLNGTPFGKSPYNLGPQDTSTKLYPTSVPGIGLKLRWNNASAFGDFPSEGAMSFPSTMGRFIYPVGSYFRIELYKTQPTVSLKNPDGDILLPPGDIAYNWVLINNIGHYAQKLNIGQILVVSTPACTFNNNKVVDFGLVTAADLAAGGIEKDLNFDITCQSDYGNYSATAAISTNTPSADNQYIKVKDSAGNSDRLGIEIKDSQGQLMLLDGSTREQLTNIVANTPATFQWKAHLKPTAGILHPANGDFTAQAEIILQTK*	hhsuite_tools	hypothetical_protein	C48	9998	1152615	1162613	GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote_CDS_0017	shell	direct	high	995	0.999	GCA_013425995.1_01098
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2169442	2169990	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	1	549	GCA_013425995_1_1_1955	GCA_013425995_1_1_1955	-	4315383	.	pfam11769	Protein of unknown function (DUF3313). This a bacterial family of proteins which are annotated as putative lipoproteins.	MSVLVLFSFFIFIQIQSVNHRAYNYDSIVYNPVVYYPTPKPTAQISQKVLDGLLNYTNDKLKTAAASRKPLVTTPGPRSVIFRGAITAVDSSKEGLQFYEVLPIALVVAGTEVATGHRTMDTSLFFEGELIDAATQKTVVKVVRKGEGKDLNNEKTPLTVDNLKQVIDDMATDARMFDPAPK*	mmseqs_cdd	nonviral_gene	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0001	persistent	direct	high	548	0.998	GCA_013425995.1_02041
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2170028	2170483	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	587	1042	GCA_013425995_1_1_1956	GCA_013425995_1_1_1956	-	4315383	.	pfam03245	Bacteriophage Rz lysis protein. This protein is involved in host lysis. This family is not considered to be a peptidase according to the MEROPs database. This family Rz and the Rz1 protein (pfam06085) represent a unique example of two genes located in different reading frames in the same nucleotide sequence, which encode different proteins that are both required in the same physiological pathway.	MMTFIRAWWKPLLFIALLATAFYYRTALTKTEASLTEVNRELKLAKDDIADMQRRQRDVAALDEKYSGELADAQGKIDQLERDVAAGRQRLRLNATCGKNATASTTGMDDGTGPRLTDAAQRDYFTLRERIETVTSQLNGLQQYVRDQCLK*	mmseqs_cdd	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0002	shell	direct	high	455	0.998	GCA_013425995.1_02042
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2170483	2171106	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	1042	1665	GCA_013425995_1_1_1957	GCA_013425995_1_1_1957	-	4315383	.	PDB:3WH1_A	Chitinase-	MDIKTFKKAAGISPELSARWHPHIVAAMAEFGITKPVDQAMFIAQVGHESTGFTRLEESFNYSIAALNDFVRAGRLTQDQANTLGRRTYEKVLPLERQRAIANLVYSKRLGNNAPGDGWKYRGRGLIQITGLENYRDCGAALKLDLVSTPELLSDDSSAARSAAWFYASKGCLKYPGDLLRVTQIINGGQNGIDDRRARFEAARRVL*	common_virus_hmm	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0003	persistent	direct	high	623	0.998	GCA_013425995.1_02043
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2171096	2171389	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	1655	1948	GCA_013425995_1_1_1958	GCA_013425995_1_1_1958	-	4315383	.	pfam05449	Putative 3TM holin, Phage_holin_3. This is a family of putative proteobacterial phage three-transmembrane-domain holins.	MTSPEVLLLLNAIICAGIAIRVLLFRREGARHRWWGGWLAYVVIVVAASVPVRTFYGYYILPDWSDVIIKAVFLAALIKTKGNVVQIFKISRSQHGH*	mmseqs_cdd	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0004	shell	direct	high	293	0.997	GCA_013425995.1_02044
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2171376	2171780	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	1935	2339	GCA_013425995_1_1_1959	GCA_013425995_1_1_1959	-	4315383	.	pfam16931	Putative phage holin. 	MSTTMTADTLNQSLSIGALASVLAGVPPEVALGALAGAVIFVTSAVEYPIKRRVLLAVLSFLCGLLFYKATAAILIGIASLIPTITRDSFEKGIVFAAGAFVSSIVAVRIGIWLYHRSENPRDLIPGRKDDDQP*	mmseqs_cdd	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0005	shell	direct	high	404	0.998	GCA_013425995.1_02045
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2171933	2172295	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	2492	2854	GCA_013425995_1_1_1960	GCA_013425995_1_1_1960	+	4315383	.	PFAM:PF04138.13	GtrA-like-O-antigen-conversion	MLKLFAKYTSIGVLNTLIHWVVFAACFYALGTSQALANFSGFVVAVSFSFFANARFTFNSSTTTSRYMLYVGFMGSLSAAVGWAADKCSLPPVVTLVVFSAISLVCGFIYSKYIVFREAK*	phrogs_hmm	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0006	persistent	direct	high	363	1.0	GCA_013425995.1_02046
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2172292	2173221	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	2851	3780	GCA_013425995_1_1_1961	GCA_013425995_1_1_1961	+	4315383	.	cd04187	Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of  bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the  bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	MKISLVVPVFNEEDTIPIFYKTVREYEPLKSFEVEIVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPQLIERWQAGADMVLAKRTDRSTDGRLKRKSAEMFYKLHNKISNPKIEENVGDFRLMSRDVVENIKLLPERNLFMKGVLSWVGGRTDIVEYTRAERIAGNTKFNGWKLWNLALEGITSFSTFPLRMWTYIGLVVAGFAFMYGAWMIVDTLAFGNPVRGYPSLLVSILFLGGIQLIGIGVLGEYIGRIYIEVKNRPRFIIKRKGDNRD*	mmseqs_cdd	nonviral_gene	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0007	persistent	direct	high	929	0.999	GCA_013425995.1_02047
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2173214	2174677	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	3773	5236	GCA_013425995_1_1_1962	GCA_013425995_1_1_1962	+	4315383	.	PHA01514	O-antigen conversion protein C	MIDINRVYRNRWSLSWSFLLSILFILPFAINNNYFVDDWLRSDTGNSGWEENGRPLASFMMSAMSLFPNGKNVFGDGSLLDVFPLTLIMSSVLLVASAYAFCVQMDITSRLKVFLICSLPVCNPFWVGNIQFRHDSALMAASFLLAVLAAIASPRGRIMLLTSFAMLTASLSLYQASINAYIAMSICIIFNDYLRRDRFDIKLAFYLALTIVVSYVVYSKLVMPIAHLSDYAISNSKILQLNKEFPLRVYNNFINYFRFLIDNSPRFYLTLWFVAIAASIASCVKKFGFSLKALYCVLFILILFLCSFGALSMFERPAIAPRTMMASSIIMMFLVYISTGWSSTVTATCSSAMIIISFIFSYIISGAMNAVERNDRFLATQIASVYFKHYNADHKNIYITGKPRLPKYALRVTKSFGMARYMVISAFNNYRFKYSLMSQYGISSGYPAPKIAEEYEIFLRKDDKQTIYSDALFDTFYYKDAIVFKFK*	mmseqs_cdd	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0008	persistent	direct	high	1463	0.999	GCA_013425995.1_02048
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2174734	2176986	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	5293	7545	GCA_013425995_1_1_1963	GCA_013425995_1_1_1963	-	4315383	.	PDB:3RIQ_A	Tailspike-protein	MTVSTEVDHNDYTGNGTTTNFDYNFRVFKRTDLVVSVLDLDNNLTELILDTDYTVTGAGGYNGGKVILSAPLANGWKISISRDVPLTQETDLRNQGSFFPEVHEDAFDKLTMLIQQVWSRFTLALRKPSSLANWYDALGNYVRNLRDPSYPQDAATKNYVDSLADINFRRTLRVPEGYVDTLPPIETRRNQLLGWNESGQPISVVPASGSASDVMIELAKPTGAQRVGTNHRGTIAADLNAIDRRPDGYTTGVAGVFSNGRDVEIDKDISTNSNTYVPEMQSRMVYRLDSNQFVEGRGGKVTDTSGKSAVYGMLGTDAAPTTNVTINDIQAGGTSSPTDNTNEAISSFALLTRYTKNLIVRGVRSFAGLAGGVYVSQARNAIVNDVITEKQVYHTGDDVGGGRAGYSVLTDNAKETIINNVMQTVEAAPNGRHLLYMSTGSGGDTNGNVNVIANNMIGRWIGRDDRNQWMLAIRASQRFILNNAIQEGGNGGMIFNDENNNITDYIASNMVFQTIKYAAGVPVYAVGQGQSPTYKSNRWLITNQNIYAVPKDSTVGRTDIIAFNISGNNGMLSNAVITCPGESTPILVGHDTQSVQNITIANIHDNIGGGSSGTPAPLIAFTGSAVSNVTVRGITTSRSPVFQRLGVVTDLTVDFTRKARISFNAGAVTKADVEGITATVTPSATGFTIAFPSHITQKAVDNLVIRMLGAGQVNIASIGAKTVTFNTYTNGGAVLSMLTGSYTFDLTLFS*	hallmark_hmm	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0009	shell	direct	high	2252	1.0	GCA_013425995.1_02049
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2177180	2177437	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	7739	7996	GCA_013425995_1_1_1964	GCA_013425995_1_1_1964	+	4315383	.	PFAM:PF10543.8	anti-repressor	MSQYHHPLDEGKLGALNSPQGVMELVEKSHLMELIRELEKDGHDVSGAAAELVALVNYVTSTQVSLSDIQTHLDYCVLSLKKSIR*	phrogs_hmm	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0010	shell	direct	high	257	0.996	GCA_013425995.1_02050
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2177970	2180519	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	8529	11078	GCA_013425995_1_1_1965	GCA_013425995_1_1_1965	-	4315383	.	PHA01972	structural protein	MAANEFLTQCERTVNAAAGRELSADEMEGLVRDMRDTTNRILASNEALSLEEAAMRAAEELSNADVLAKQIEARNKAINTRVAAQRLGELRTIWKDRPDIGLEAILVGRNDARTGARRSVSSEVAQLRGKYHAGINYDFDRAGLVKFIASGSNDREIADAMWRIGRGESTEGMTKQSVSAAQIIMKWQEAARIDENRAGAWIRKEPGYIVRQSHDIMKIRAAGYDAWRNAILPRLDERTFDGVADRDQFMRNVYNGLASGVHLTSEKPDWMNGFKGSANAAKRASQERVLHFKDGISWHEYNQQFGTGSLREALFGGLNSAARNTGMMRMLGTNPGNMFKYLTDTLAEDVSKSGNPAALADYMTKVRRLNRTVMPQVDGSLNIPGSVGWANASAAVRGWLRMSQLGGAVISSFNDVPIAATEMRYQGQNFMQAVLGAMKGRFSRYNSAEQKEILSSIGVYSDAMTQEIIRRISGDDSLTGKMGRAQQLFFKYNLMNFWTESGRNSNALMITNWLAKNADQPHASLPEDLRRVLDLHGIGDREWEIFRNMDMADSEGRKFMTTSGVRGVPDDVIARYVESKGLNPTDRAIADARDQLEGQLRGYILDRLNIAMSEPGDRTQAFMKMGTVPGTVAGEAIRFAGQYKSFTASFMQNVLGREVFGRGYTPAGLGESKTTSLTNALMRNGNGAFMGAANLFVWATLFGYVSMQAKLMMKGQTPRPADAKTFLAAAAQGGGLGILGDFMFGEVNRMGAGPVTSLMGPAASNADSIITLLQQTTRGEADLGDWYRTALDNTPFLNIFWLRTAMNGLILNRIQDSLDPGSLERYQRRVEREQGNEFLVPPSQFMLGK*	mmseqs_cdd	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0011	shell	direct	high	2549	1.0	GCA_013425995.1_02051
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2180519	2182231	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	11078	12790	GCA_013425995_1_1_1966	GCA_013425995_1_1_1966	-	4315383	.	PFAM:PF13406.5	internal-virion-protein-with-endolysin-domain	MTIFTEDPGTGINQPISNAPAGLGESLLSSLQQGFEEGPVMSGIRFSSADRLANDPNSAIVSKQEADERLKQYGVKSINVPDNGVTKAFLDHVVEERQNSLARQQIAMSAPSGWAATPLNFAASLAGSMADPGNVALALVPFAGEAKAASVAGRFGERLLAGARMGAAQAVATVPLTAQAAAADGDDFTYGNALESTFFNTMAGGLMHAGGGIIADLVRARRPAGAGNDTAAPLAQADIQPESQPTPVITPDNIPSGVNIPERGTNADLAAAISSEAESYAYSRAYDDVVPEYMARQQELQTGQIDNVADLRTELSANLRRADELDATLQQRTTEYQGQRMKFKEARRLAQKDIDAEKAQLAARNEEINQALERNAAAEQARGRQAQLSRGEIPDDLKVTIAERAQQIRDGMQMSPVAGAVRTAASAIREADWTVNQQAYRAALAHMMEGRSPDVEPFYELHKPALRERAIQRIQNPVRQVDETARPVSETADRVYQETQKADHELTAAAADLENEFNISNALLDDIAVDNPELAATMRENLNAIRAEASDNSMSNAFRAFAACMINRGI*	phrogs_hmm	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0012	shell	direct	high	1712	0.999	GCA_013425995.1_02052
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2182233	2184890	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	12792	15449	GCA_013425995_1_1_1967	GCA_013425995_1_1_1967	-	4315383	.	PHA00658	putative lysin	MPVVPTVTGRQVESRGYSSPGLQALPQPNVGDVIADASQKYAGAFAEAKQRANVALTQEASLQLNAVGNDLLTNPDTGFLNLQGKNAIGKSQEYTQQFDQQVEQIAAGLPDEQTRNAFLQQAQQQRMSFTTQAGRHEAGQVRQYEAGMQEATLKTLTTQFMNPEMANVAGLTARNSIIAYGKAHGQSDEEIEQNWISWRENAAKGASEAWYVPMYQQMLGPGGKIQVTDTPTEAQLFSAMIWNESGGNQYSKDGAPLVSSKGAVGVAQVMEDTGPEAARLAGLPWDRDKWLNDPRYNAKLGQAYFGAQMKKYGNNPVLAVAAYNAGPGAVDDWINGTNKSGSNPSKVKLGDPRTGEVSNEQFAAAIPYEETRNYVAKVTGSAAAIPGDATMENLISQPWWNAMSPASKAQMMSKVAGLYDMQASAGRVALQSRMQDDLARLEAGQPVEPISAREWAAVMPLQAAPAERMQMEKTYQQYQQAMTLQPVYQSIMQGNVQQATAAVQALQPQENDADFKYKHELYATAQSKLNQVLKARESDPGTWLQQYSPVVQSAFAEYQNNQASGEYLVSRIQSEKDRLGIRSKKVLPDTMVNSLLERIDNSQESSVTAIQSVAQSFGKYSDQVMQQVQKNAFPALQVVMATENPRAANALWQNRSVKTADLRGSFEKPDADKADSSWNDQAKDFASTMVVQPGGTAVWNNFNEQGKRLTYINMQRGMSPSDAAKQAYQDILGEQYQTSGTWRLPNRTGLDLRDVTDGANAYLENLSAEQIMPLIGDPRLPESVNKEQSLSRIKESAQWVTNSNESGLTLMMNGLLVNGADGNPITVPFSDLAKLGTGNRSTWNKLTKFIDTPVKYTPGQSKNYSVESQRENILDILQNGQQSGR*	mmseqs_cdd	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0013	shell	direct	high	2657	1.0	GCA_013425995.1_02053
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2184901	2185443	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	15460	16002	GCA_013425995_1_1_1968	GCA_013425995_1_1_1968	-	4315383	.	7EY7_B	bacteriophage T7, VIRUS, VIRAL PROTEIN	MCEPTTALVAVSLASAGIQAYSQYQNGRYSAAVANQNADIAEAQVNDAINRGNAQADEVRRRNRIAQGSQAAAIAAGGGDLSTGGSLDIMGDTAQFGELDALTTVNNASREAYGYQTQAANSRAEASSARSQANMGVFSTLLTAPLSAYGAYKMGGGTWNPFTQSKAAPISAAVGTLTGR*	hhsuite_tools	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0014	cloud	direct	high	542	0.998	GCA_013425995.1_02054
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2185443	2185907	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	16002	16466	GCA_013425995_1_1_1969	GCA_013425995_1_1_1969	-	4315383	.	CDD:PHA00432	internal-virion-protein-	MLDVRIVPAEQRHIEEMLPLVRQADVNEFIAISGQSPREVMEHGLRISTFCCAGLINGKVVTIFGVAPASILSGRGIPWLVGTDDLHKYQRTFLRRCRHVVNAMLMPYPYLENYVDERNHVAKAWLKWLGFHLEDSVPYGKEQRPFHRFYMEKK*	hallmark_hmm	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0015	shell	direct	high	464	0.998	GCA_013425995.1_02055
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2185900	2188383	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	16459	18942	GCA_013425995_1_1_1970	GCA_013425995_1_1_1970	-	4315383	.	PFAM:PF11134.7	Phage-stabilisation-protein	MPISWIQPSFAGGEIAPSLYGRIDMAKYQVALRRCSNFIVRQYGGVENRPGTQFIAAAKYPNKKCRLIPFQFSTVQTYALEFGDKYMRVFKDGGQVLVSGTSNIYELVTPYAEADLFRLKFTQSADVLTIVHPKYPPMELRRYAHDNWQIVAVQTKNGPFEDINVDEAQKVYASASTGTITLTATASIFGAEQVGKLFYLEQPAVDSIPVWETGKKTTAGGIIRAGSNYYKALTTGTTGTLRPSHNEGAAWDGWGGTGDTDTGVQWQYLHSGFGIASITAVGSDNKTATANVISYIPENVVGSGRPSYKWARYAWNDVNGYPGTVVYYQQRLFFAASTAFPQTIWASRIGDYKDFGKNNPIQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEYIITGDQNKTLTPSAFAFSSQGSNGCSNLPPIAVANIALFVQEKGSAVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWSFSTVPYSTAWCCRDDGMLLALTYLKDQQVFAWAPQPTDGSFESTCSISESQEDAVYFVVRRVINGETVRYIERLASRLFTSIEDAFFVDCGLSYDGRNASAATIKITGGSDDWDYRQEYTLTMSGGLGFTGSDVGAQIQIPYVGQDANGNPQDMELRCNITQLTTANVVKISASRNIPPELRDTAVTNWQMARQTFSGLGHLEGKTVSILSDANVEPQKVVTGGAVTLESPGAVVHIGLPYTSQLETLDVNINGQETLLDKKQLITSVSLVVNASRGIWASTPGGQFYEYPQREFEFYDDPVDDATGKVTLKVDSTWGLNGRIIVRQQDPLPLSVLALIPALAVGGRNA*	hallmark_hmm	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0016	shell	direct	high	2483	1.0	GCA_013425995.1_02056
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2188383	2188988	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	18942	19547	GCA_013425995_1_1_1971	GCA_013425995_1_1_1971	-	4315383	.	PDB:5MU4_D	Tail-tube-protein	MASVVEICNLALSNIGSSRSINSLDEKSKEADVCNLHFEACRDAVLADAEWNFATKRVALADTGIAPPDWTYAYAYPTDCLRIIEIMVPGVRYPTAAMRINYETGVNDAGTGKLIYTDQQEARLKYVARITDVNMFDPLFQDALAWRLAAAINMPVTGDANLTRFCLQMYQSVILSAGSHSMNESQEPQSPDSEFTTARLS*	hallmark_hmm	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0017	shell	direct	high	605	0.998	GCA_013425995.1_02057
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2188988	2189323	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	19547	19882	GCA_013425995_1_1_1972	GCA_013425995_1_1_1972	-	4315383	.	3J40_M	gp10, gp7	MKTVNMKTGTEAFEGDDGQPETRDQYPWGLRITLDNDSLMKLGVKAKSLPSVGDVVAIMGMAKVCSVSTRSTDSGEDNYVELQITDIGLNPPKRDDAQELKSAFYPDQEGE*	hhsuite_tools	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0018	cloud	direct	high	335	0.997	GCA_013425995.1_02058
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2189369	2189653	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	19928	20212	GCA_013425995_1_1_1973	GCA_013425995_1_1_1973	-	4315383	.	.	hypothetical protein	MSKYIVKARSFINGRIYEAGEEIDFEGNAGHNLVAKDKASNEDRPKPVDPDADKILDDLRNEYIDLFGEAPHHNAGAKSLQEKIDAKKKELGVL*	.	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0019	cloud	direct	high	284	0.996	GCA_013425995.1_02059
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2189646	2190038	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	20205	20597	GCA_013425995_1_1_1974	GCA_013425995_1_1_1974	-	4315383	.	PDB:3J4U_J	Major-Capsid-protein	MLLDQQALFSAAQAITATAASTNVIDTGSAKDVGKGGDVPLLIQVVEGFNNLTSLTVAVQTDDNAAFSSPTDVISMVIPVASLVSGYKTPVITLPMKMGRYVRLNYTVTGTAPTTGKVTAGIVGGVQTNV*	hallmark_hmm	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0020	cloud	direct	high	392	0.997	GCA_013425995.1_02060
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2190049	2191056	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	20608	21615	GCA_013425995_1_1_1975	GCA_013425995_1_1_1975	-	4315383	.	PDB:3J4U_C	Major-Capsid-protein	MALIGQTLPSLLDVYNRTDKNGRIARIVEQLAKTNDVLTDAIYVQCNDGSKHKTTIRAGIPEPVWRRYNQGVQPTKTQTVPVTDTTGMLYDLGFVDKDLADRSGNSQAFRVSENMGKLQGFNNKVSRYTFYGNTDAEPESFMGLAPRFNTLNTSKAASAENVFNGGGTGTTNTSIWFMSWGENTAHMIYPEGMVAGFQHEDLGADLVDDANGGKFRAYRDEFKWHLGLSVRDWRAISRICNIDVTTLSKDASAGADLISMMVDAYYARDVAMLGDGKEVIYCNKTIHAWLHKQAMNAKNVNLTIEEFAGKKVVSFLGIPIRRADAILNTESAVTN*	hallmark_hmm	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0021	cloud	direct	high	1007	0.999	GCA_013425995.1_02061
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2191067	2191795	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	21626	22354	GCA_013425995_1_1_1976	GCA_013425995_1_1_1976	-	4315383	.	PFAM:PF11134.7	Phage-stabilisation-protein	MNLFQRLLFRRLCNEQPADGGAGGGGAPSEASGAPASEQPQSKADPQPGAQVEGQSQDLAEQKTNDGAQQPKTDEEKAGEKKDETKKPEGAPEKYELTAGEGIELDAAAVKEFEPIARELNLSNEQAQKLVDVYASKILPLVNQQQLAAWQKQGEEWQEAIKADKEIGGDKLTSSISAAQRAIDQFGTPELKEYLEASGLGNNPALVRFCVQVGKAMSEDNMVSGGHVSGGNDLISAFYPEK*	hallmark_hmm	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0022	shell	direct	high	728	0.999	GCA_013425995.1_02062
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2191798	2192097	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	22357	22656	GCA_013425995_1_1_1977	GCA_013425995_1_1_1977	-	4315383	.	.	hypothetical protein	MTDIYDEDQPTAEQIAQQKRLEERDAADIRAVMGTEAGRRVIWRVLSQGKTFATTFAGDPHVTAFNEGQRNMALALFQRVMTCCPDLYLTMADEAAKQE*	.	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0023	shell	direct	high	299	0.997	GCA_013425995.1_02063
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2192094	2193773	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	22653	24332	GCA_013425995_1_1_1978	GCA_013425995_1_1_1978	-	4315383	.	PFAM:PF12236.7	Head-Tail-Connector-protein	MPMKNETLKEQLTKQLGMLEQERTTFEPHWRELSDFIIPRGSRFLTSEANRGDRRNNKIVDPTATMANRTLSSGMMSGITSPARPWFKLATPDPEMMDYGPVKLWLETVQNRMNDMFNKSNLYQSLPIIYSSLGTFGTGALAVLEDDEDVIRTMPFPVGSYYIANSPRLSVDTCFRKFSMTVRQLVREFGLNSVSSSTKSAFENGTYEKWVDVVHAVYPNMNRETGKMNAKNKAFRSVYFEVGGDNDKVLRESGYDEFPVMAPRWEVNGEDVYGSSCPGMIALGQVKALQLEQRRKAQQIDKQTNPPMIGPTSLKTQRVSLLPGDITYVDQVTGAEGLRPAYMVNPNLGDLLGDIQDTRQLINSAYFVDLFMMLQNVNTRSMPVEAVIEMKEEKLLMLGPVLERLNDEFLDPLIDRAFSMMARKNMLPPPPDVMQGMPLRIEYISVMAQAQKAIGLSSLERFVGFVGNLASAKPEALDKLDVDQAIDNYAVMSGVSPTVVVPQEQAQQTRNDRAQQQQQAMALQTGMAAVQGAKTLSEAKTADPNLLTALAGAAGGQPQ*	hallmark_hmm	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0024	shell	direct	high	1679	0.999	GCA_013425995.1_02064
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2193788	2193997	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	24347	24556	GCA_013425995_1_1_1979	GCA_013425995_1_1_1979	-	4315383	.	.	hypothetical protein	MCIGSKPSIPKAAPVVQAAPQEQDQAVVDARDEETRRRRAAAGRNSTMLTGAQGDTSAASTSGKTLLGQ*	.	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0025	shell	direct	high	209	0.995	GCA_013425995.1_02065
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2194729	2195775	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	25288	26334	GCA_013425995_1_1_1980	GCA_013425995_1_1_1980	+	4315383	.	.	hypothetical protein	MLDFIRDILVSFRQASLERVRSPFLGAFVFSWLGFNWPMLAILFFSKREIEKRLVYIGDNFGIESFIIGPLCTSALIALLLPQINKLVTRIQDKPNTDTVEMSLESKIKIGKKQQEIAEIEARKKLAEKKEERNIEEGIQQIKKEHEKALRDINLARQQYKDISSKLTDAAKTIAESQSQLSVEKEARAKTEKELISVNERVKVATEKLISANNDNNKAKVEMEGLTREINNLKKQMEEVSSYNSHLLSELNFISEKVPQFVRLANIDGKMEIIFNRTNYDKVLEALNLNNINILTAVDDDFILPDGTKFGSQTIKERNYKSKKDSEYIKEDRNIIISHQRAKPRNEE*	.	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0026	cloud	direct	high	1046	0.999	GCA_013425995.1_02066
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2195780	2197246	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	26339	27805	GCA_013425995_1_1_1981	GCA_013425995_1_1_1981	-	4315383	.	PDB:4IEE_A	Large-Terminase	MSDAVDIQSQLVEDIASFTHDPLGYALYAFPWGEPGSELEDSEGPRDWQAEAFDEIGQHLSDPATRFEPLMLARASGHGIGKSAFISMLIKWGMDTCEDCKIVVTANTENQLRTKTWPEIAKWQRLSITRDWFTATATAIYSNDPNHTKAWRADAIPWSENNTEAFAGLHNKGKRIILVFDEASNIADLVWEVAEGALTDEGTEIIWVAFGNPTRNTGRFRECFRKYRHRWKCKQIDSRTVEGTNKSQIEKWAADYGEDSDFFKVRVRGIFPDASETQFIPTGMTEEALTRIVTEAQVAHAPVILGVDPAYSGADDAVIYLRQGLHSKLLWRGSKTTDDLIMAKRIADFEDQYRADAVFIDFGYGTGLKSIGDGWGRAWTLIPFGGKSTDPQMLNKRGEMYNNVKTWLKLGGALDERETAEDLSAVEYKVRVDGKIVLEPKEDIKDRLGRSPGCGDALALTFAFPVSKRMNLPGQQQGRTISDYDPYA*	hallmark_hmm	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0027	shell	direct	high	1466	0.999	GCA_013425995.1_02067
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2197239	2197844	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	27798	28403	GCA_013425995_1_1_1982	GCA_013425995_1_1_1982	-	4315383	.	PFAM:PF03592.15	Terminase-small-subunit	MAEGAGKRKSTKFKPLTDMQERYCQEYVKTPDAQGQAAKRAGFSSYDNAAMRMMKDDRIRDRIAELMEERNKRLRVSADYVLIRLVEIDQMDVLDILNDDGSLKPIRDWPKVWRTSLSAMDINRIRMAGKDGEDDIESTLQKVKWPDKVKNLELIGKHVDVSAFKEVHEHNVNLSLADQMAKARQRAANSKKGAKKVKADE*	hallmark_hmm	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0028	shell	direct	high	605	0.998	GCA_013425995.1_02068
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2197923	2198351	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	28482	28910	GCA_013425995_1_1_1983	GCA_013425995_1_1_1983	-	4315383	.	pfam10711	Hypothetical protein (DUF2513). This family is found in bacteria. The function is not known.	MKINQEYLKDLLLAFEDTEGPDTWVYELVAKGYDQESPEFIFHMRLLDDNGLICRVDGEPGFGHQYQAYIGGYDYYWVDVPLRLTARGHDFIADLRQKEVWNSVKENFKDASMSTLVDVAKQLAQGYAKQKIKALTGFDPDS*	mmseqs_cdd	nonviral_gene	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0029	cloud	direct	high	428	0.998	GCA_013425995.1_02069
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2198379	2198717	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	28938	29276	GCA_013425995_1_1_1984	GCA_013425995_1_1_1984	-	4315383	.	PFAM:PF10723.8	transcriptional-regulator	MPKSAAERKAAQRARQAAAGGRKLELVLDAQEMDMVARNCAARRPGKEPYELNEYITMLIRQDNARLQEQIAEMRVRQCGKCGDALPVDSCPCQGDSQCWVTSGWHALKLVV*	phrogs_hmm	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0030	shell	direct	high	338	0.997	GCA_013425995.1_02070
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2198710	2198907	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	29269	29466	GCA_013425995_1_1_1985	GCA_013425995_1_1_1985	-	4315383	.	.	hypothetical protein	MDKCQGVFGKLFGHSYRPAITKGAASVNLDAKGVGSRAIIEMVDKTRKETFHGIYCKRCGKVINA*	.	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0031	cloud	direct	high	197	0.995	GCA_013425995.1_02071
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2198907	2199395	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	29466	29954	GCA_013425995_1_1_1986	GCA_013425995_1_1_1986	-	4315383	.	.	hypothetical protein	MSEISKERAQEIFLGNGPEPTASEEWELARIALDWLALRERAEPVRQLENLEHFIAFWRKVQSGAMSPSKNEINYTVWFLEGLADIAAPPAPVVPVDDQARQAYENHVRSRYQYPMLERHPEDGRPWHGEYKESARQMEWEDWLHSWNACRAAMLATPGKEG*	.	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0032	cloud	direct	high	488	0.998	GCA_013425995.1_02072
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2199600	2200097	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	30159	30656	GCA_013425995_1_1_1987	GCA_013425995_1_1_1987	-	4315383	.	PF13935.6	Ead/Ea22-like protein	MNTSKLKAAAEKARWGYWSAYKPHSGARGYEVRVGSEAVAQHCLKDDAAFIAEASPKAVLCLIAALEAARADCRENAARIAELESQRALAFSACNRWADKCREAEKRVAEIEASHKNLREALAAIHNTIRLDGLNAPLAAIMSSAKRAHEESATAAGINLETGGK*	hhsuite_tools	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0033	cloud	direct	high	497	0.998	GCA_013425995.1_02073
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2200094	2200384	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	30653	30943	GCA_013425995_1_1_1988	GCA_013425995_1_1_1988	-	4315383	.	.	hypothetical protein	MHIENKELAKAGHELAKCLDSNTPLIDIAKMIVRVADKLDVTTAALREKTKQCDALAVRAQITDRIFDNLSADEAEQACGWINTWIEYQMSKGGAA*	.	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0034	cloud	direct	high	290	0.997	GCA_013425995.1_02074
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2200421	2200888	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	30980	31447	GCA_013425995_1_1_1989	GCA_013425995_1_1_1989	-	4315383	.	cd22992	Monokaryotic chloroplast 1 protein (MOC1) and similar proteins. Monokaryotic chloroplast 1 protein (MOC1) is a Holliday junction (HJ) resolvase, originally identified from the green algae Chlamydomonas reinhardtii, but was later shown to be genetically conserved among green plants, such as Arabidopsis thaliana and Zea mays. Nicotiana tabacum MOC1 (NtMOC1) is exclusively localized to chloroplasts, and is essential for chloroplast nucleoid segregation. Holliday junction resolvases (HJRs) are endonucleases that specifically resolve Holliday junction DNA intermediates during homologous recombination. NtMOC1 cleaves only four-way junctions and specifically introduces nicks between two cytosines at the homology core. NtMOC1 has the highest structural similarity to RuvC resolvase, suggesting their potentially similar HJ binding and resolution activities. However, the molecular basis for specific HJ resolution by MOC1 remains elusive. This family also includes bacterial homologs.	MGVIIGIDPGCSGALVAVDEKGEYVAHLNMPTIKVGSKARVNGAQLAAWLQSWSISHAYLEQVGAMPGQGTASMFTFGHAAGIAEGILQGAHIPYTLVTPQAWKKAAGLIGSDKDAARSRAIQLYPALRALDAKAKGQAIADALLIARHGLMLKS*	mmseqs_cdd	nonviral_gene	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0035	shell	direct	high	467	0.998	GCA_013425995.1_02075
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2201004	2201837	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	31563	32396	GCA_013425995_1_1_1990	GCA_013425995_1_1_1990	-	4315383	.	PDB:2RU8_A	Primosomal-protein-1	MASSWIKVEVITPDKPEIFQIAEILNIDPDAVLGKLVRIWAWADQQTIDGNAGSVTKGVLDRLAFITGFADALITVGWLAYEDGRLVLPNFERHNGESSKKRALTNRRVAEHRKRETQKVTQTALRKELPEEEEDIKDKTPHSARVKFEPVDNPHNQRLSKNPDPGAGNFVMDGYVPPGGSAPLGKFAISPDWKPDPDFRKQAAIWGIQLTKEVTPQELASFIDFWQAEGKAFHHTQWQQKLARSVQQSRARVNGRTGRDVNAIPEPEDEIPPGFRG*	rep_hall_hmm	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0036	cloud	direct	high	833	0.999	GCA_013425995.1_02076
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2201837	2202046	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	32396	32605	GCA_013425995_1_1_1991	GCA_013425995_1_1_1991	-	4315383	.	.	hypothetical protein	MKIITRTDAAKTGMKRYYTGKPCKHGHDSERWVYNGHCVACTMESNKRRQDEIKRLMAAAEQGESAGVI*	.	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0037	cloud	direct	high	209	0.995	GCA_013425995.1_02077
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2202196	2202426	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	32755	32985	GCA_013425995_1_1_1992	GCA_013425995_1_1_1992	-	4315383	.	PFAM:PF10078.8	transcriptional-repressor	MAIEQKFDFKKHWLSLDQAGREAFALDAGTTAGYIAAHYCGRRKTPTKARMEKLFKACKQRGWLTSKNDLVQFFYS*	phrogs_hmm	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0038	shell	direct	high	230	0.996	GCA_013425995.1_02078
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2202581	2203171	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	33140	33730	GCA_013425995_1_1_1993	GCA_013425995_1_1_1993	+	4315383	.	PFAM:PF10078.8	transcriptional-regulator	MKSIHEIRRENLKEILRRYFDGKQIRLAERLEIQQNLVSRWESGAKNIGDKVARRIEEAARVESHWLDVDHQLANMLENQESDTGPTNTSELAASILKKWMDADGLSQQKVAAASGVSQATINRLLRNESSISVNNLAAIAESFGRQAYEMILPPEAPGLISYDHKLYAALPQQEKDKIRTFIDFVMSQNQNDKQA*	phrogs_hmm	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0039	shell	direct	high	590	0.998	GCA_013425995.1_02079
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2203420	2203563	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	33979	34122	GCA_013425995_1_1_1994	GCA_013425995_1_1_1994	+	4315383	.	.	hypothetical protein	MQWRIINGWHCVTISGLMSWKFRTLREAVEWAFITREARSVEREMRA*	.	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0040	shell	direct	high	143	0.993	GCA_013425995.1_02080
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2203538	2203726	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	34097	34285	GCA_013425995_1_1_1995	GCA_013425995_1_1_1995	+	4315383	.	.	hypothetical protein	MLKEKCAPEATVDVNGRPYRVYRQANGYEWRFVSVDKPREGFTMNFEQMVKAGFERLTGYSQ*	.	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0041	shell	direct	high	188	0.995	GCA_013425995.1_02081
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2203723	2204025	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	34282	34584	GCA_013425995_1_1_1996	GCA_013425995_1_1_1996	+	4315383	.	.	hypothetical protein	MNLQQIGKMEKIIEQMSADYCICKQVEARQEELDAALSNSALNKVIRESWQAAGMRNEIITHVLEDVEATEIIGALLRELSGVAARWDMADQIDSARDAA*	.	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0042	cloud	direct	high	302	0.997	GCA_013425995.1_02082
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2204022	2204843	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	34581	35402	GCA_013425995_1_1_1997	GCA_013425995_1_1_1997	+	4315383	.	PDB:3H4R_A	Exonuclease	MRPGIYRDISNEAYHAGDGVSKSQLDLVAINPALLAWQRNAPVDTEKLQALDMGTALHCLLLEPEEFDKRFIVAPQFNRRSNAGKEEEAAFLNKVAGMGMTIMSAEEGRKLELMRDSAFAHPAARWLLEQEGDCEASHYWIDEETGELCRIRPDKRLAQFPVMTDVKKVSDMSRFARHIDEFRYHVQDAMYCEGAKQTTGEPHSFFFIAVSESIDCGRYPVRVFELDAYDKDEGFRLFRRDLTAYHQYRTSDEVGGIETIKRPEWARKQDMYA*	common_virus_hmm	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0043	shell	direct	high	821	0.999	GCA_013425995.1_02083
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2204840	2205724	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	35399	36283	GCA_013425995_1_1_1998	GCA_013425995_1_1_1998	+	4315383	.	PFAM:PF03837.13	RecT-protein	MSNDITLTAQPGATVGTAAAIFSPEGLNQLVRFADLMAQSKATVPAHLAGKPADCLAVTMQAAQWGMNPFAVAQKTHVVNGALGYEAQLVNAVVSSSSLLATRLNYRWDGDWSKVSGKTDKSPNLTVTVWATLKGETEPRELTISMAQAGVRNSPNWEVDPRQQLAYLCTKRWARLHAPDVLLGVYTPDELEESRPRVERDITPPAVDARSVNSLIGKTAPQQDAPAAQHRPRNERTPDELLAGFTEYAGNASDVADLDSTYAAVAKRLASHQEHLDKATDVYSLRREEMTAAQ*	common_virus_hmm	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0044	shell	direct	high	884	0.999	GCA_013425995.1_02084
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2205777	2206025	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	36336	36584	GCA_013425995_1_1_1999	GCA_013425995_1_1_1999	+	4315383	.	COG3311	Predicted DNA-binding transcriptional regulator AlpA [Transcription, Mobilome: prophages, transposons]. 	MKRAYGKKELLEVVPLSISTIDALEKKGEFPKRWYITDKRCAWDADEISEWLEERKAKSPSVFGGKKPPVEQRVFRPVSSAA*	mmseqs_cdd	nonviral_gene	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0045	shell	direct	high	248	0.996	GCA_013425995.1_02085
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2206022	2206141	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	36581	36700	GCA_013425995_1_1_2000	GCA_013425995_1_1_2000	+	4315383	.	.	hypothetical protein	MTAITRHWQKWSGLYWYLAGIAAWMYLIAAIFTQDGWLK*	.	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0046	shell	direct	high	119	0.992	GCA_013425995.1_02086
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2206138	2206443	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	36697	37002	GCA_013425995_1_1_2001	GCA_013425995_1_1_2001	+	4315383	.	PFAM:PF06069.10	transcriptional-activator	MKSKTRLERYHENYVTRRLGSQVATSPAAQAIEQRALELEAKGLFRVAAGLWLKCLDAAVGDVERQRIAMRRERCITRGCARREHYCGVNAGQITDMWGLL*	phrogs_hmm	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0047	shell	direct	high	305	0.997	GCA_013425995.1_02087
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2206440	2206604	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	36999	37163	GCA_013425995_1_1_2002	GCA_013425995_1_1_2002	+	4315383	.	pfam07026	Protein of unknown function (DUF1317). This family consists of several hypothetical bacterial and phage proteins of around 60 residues in length. The function of this family is unknown.	MTNSHDDIQVGSVLMMYSPVRRGWITPDGSVITNPLKAQRIAEALHNQIKKAAA*	mmseqs_cdd	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0048	shell	direct	high	164	0.994	GCA_013425995.1_02088
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2206601	2207197	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	37160	37756	GCA_013425995_1_1_2003	GCA_013425995_1_1_2003	+	4315383	.	PDB:5K7W_B	N6-adenosine-methyltransferase-subunit	MTGKYTLIYADPPWSYRDKAADGDRGAGFKYLVMDVQDICRLPVWELAAENCLLAMWWVPTQPVEALKVVEAWGFRLMTMKGFTWNKCGSRQADKLVMGMGHMTRANSEDCLFAVRGKLPERMNAGIIQSFTAPRLAHSQKPDCVREKLVQLLGDVPRIELFARQSSHGFDVWGNQCEGPAVQLLPGCAIPVVKSVAA*	common_virus_hmm	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0049	shell	direct	high	596	0.998	GCA_013425995.1_02089
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2207194	2207355	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	37753	37914	GCA_013425995_1_1_2004	GCA_013425995_1_1_2004	+	4315383	.	.	hypothetical protein	MTRADCDRYERESVIRALGDSRRGPGEDAAQRLIRGIERRRAVADKAKKKEKA*	.	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0050	shell	ambiguous	low	5	0.031	GCA_013425995.1_02089
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2207352	2207660	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	37911	38219	GCA_013425995_1_1_2005	GCA_013425995_1_1_2005	+	4315383	.	.	hypothetical protein	MSQKHHIQQMQQRIDPAVLKKASDEYSDLLITMCLCMKLAGPTRANVTACAKALKKRLTTWHSQKELDAIIKAWDPVGYFLGLRREANEAAASYGEPADTFI*	.	hypothetical_protein	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0051	shell	direct	high	308	0.997	GCA_013425995.1_02090
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2207680	2208930	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	38239	39489	GCA_013425995_1_1_2006	GCA_013425995_1_1_2006	-	4315383	.	PDB:1Z19_B	Integrase	MLTDTKLKNLKPRDTLYKVADRDGLYVAVTKTGVISFRYDYRINGRRETLTIGKYGADGITLAQARDELIAAKKLVNAGISPASQKREGKRLVKDAETFSSFIEKYMQHVTLAESTRAMKEAIIRRDILPALGRKVMAEITPSMVRSMCDRILERGGNATAIQALEMVNSVYRFANDRGHQFVNPAQGIKPKTLATFRPRERSLSPEEMGIFLRALEGTTAMATMKLAVRLIALTLVRKSEALLAHWDEVNLDGRIWTIPAQRMKGSRPHVIYLSRQAISLMKEMKIHSCGSELLLPGRYRLDRPLSNAALNIMLPNIIERAAKAGEKISHFTIHDLRRTGSTLLHEAGYPSDWIEKALAHEQRGVRAVYNKAEYARQREYMLQQWADMLDNWKAGDHYDLVPFSPAKFEKWMEEK*	common_virus_hmm	common_virus	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0052	shell	direct	high	1250	0.999	GCA_013425995.1_02091
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2209108	2209329	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	39667	39888	GCA_013425995_1_1_2007	GCA_013425995_1_1_2007	-	4315383	.	pfam11769	Protein of unknown function (DUF3313). This a bacterial family of proteins which are annotated as putative lipoproteins.	MHSTSVFKASGVAALLLLAGCSSSTTKPEQYSGFLKDYSGLEKTTSSTGKPVMRWVAPGFNLNNYDSMVNCLS*	mmseqs_cdd	nonviral_gene	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0053	shell	direct	high	221	0.995	GCA_013425995.1_02092
GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote	cenote	CDS	2209545	2210138	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C88	40104	40697	GCA_013425995_1_1_2008	GCA_013425995_1_1_2008	-	4315383	.	PRK11207	tellurite resistance methyltransferase TehB. 	MTVRDENYFTEKYGLTATHSDVVNAVNYVEPGRALDLGCGNGRNSLFLAARGFDVTAWDKNPASIANLERIAAAEGLNHLHIAVKDLNTLRFDGEYDFILSTVVMMFLERDTIPGLIDNMLRCTAPGGYNLIVAAMDTDDYPCTVGFPFAFREGELRRYYEGWELIKYNEDVGQLHKTDASGNRIRLRFATMLAKKR*	mmseqs_cdd	nonviral_gene	C88	40697	2169442	2210139	GCA_013425995.1|CP059045.1@region_2169443_2210139@tool_cenote_CDS_0054	persistent	direct	high	593	0.998	GCA_013425995.1_02093
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2285644	2285970	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	1	327	GCA_013425995_1_1_2076	GCA_013425995_1_1_2076	+	4315383	.	cd08026	Cysteine-rich 4 helical bundle widely conserved in bacteria. This functionally uncharacterized protein forms a 4-helical bundle with a bromodomain-like topology. It is present in major bacterial lineages and contains highly conserved cysteines in a repeated pattern, whose sidechains appear buried. Some family members have been (mis)annotated as putative ferredoxins.	MLDEYKKCIEACYLCATACDNCAASCLEEENLEMMRECIKLDMQCANICRLAAQFMALNSDSAQALCRLCADVCQKCGDECGKHEHDHCQECSRACHHCAEQCRKMAA*	mmseqs_cdd	nonviral_gene	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0001	shell	direct	high	326	0.997	GCA_013425995.1_02162
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2286158	2286367	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	515	724	GCA_013425995_1_1_2077	GCA_013425995_1_1_2077	+	4315383	.	.	hypothetical protein	MMPYKCLKHVIVIRPVRLLLRVNVPLTLPNPLQTEVILMPRPELLNVLLRIFSISFKNEIVLIAVEPDG*	.	hypothetical_protein	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0002	cloud	direct	high	209	0.995	GCA_013425995.1_02164
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2286675	2287106	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	1032	1463	GCA_013425995_1_1_2078	GCA_013425995_1_1_2078	-	4315383	.	PFAM:PF02413.16	tail-fibre-assembly-protein	MPSYYYSPKLNAFFAAALENDYRASGTWPDDVTPISDELYHVLIEGQADGRIITADEMGQPKLIEPTIDWRAQAETRRQMLLSQAHSVTSDWRIELMLGALPDADKASLSRWMEYIRKVKALSFTCVSDEQSFKAITWPVKPG*	hallmark_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0003	.	unmatched_CDS	none	0	0	.
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2287112	2288335	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	1469	2692	GCA_013425995_1_1_2079	GCA_013425995_1_1_2079	-	4315383	.	PDB:4A0U_B	Tail-fiber	MHRIDTPTAQQGKFGAGKNGFTAGDPTLGVPATQLDETFFDSVQEEICAVIEGAGIQLKKSDRAQLSAAIDKMIQAKHELALLIKNNLSDVDDVEQARKNLGLGKLALKDSLKASDVGAIPITGSTDITGPLRTTGEVQSSTPNGFRIAYGGYGAFWRNDGANLYLMLTDNGDPYGSYNGLRPFRVDLAKGNVSIGTPLYVASTIQADKGVQSGYVGSYAFSAQFATGAAFYETFNTTGVSEFHPLLKQKATITNKAAWSFSYGSLCDNGKLSWCLHMIDGSGHTYRHEWDTSGNYTCPGQLIPGNYANFDARYQAKNTANRASSGWYKDTSTGLIIQWGVAKRSADSTSIAYPIAFPNAALCTNLTVIWGGHFTDQNVFCQPVDRTRFNYIAGSGEVSSYFLAIGY*	hallmark_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0004	cloud	direct	high	1223	0.999	GCA_013425995.1_02165
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2288392	2288964	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	2749	3321	GCA_013425995_1_1_2080	GCA_013425995_1_1_2080	-	4315383	.	PFAM:PF10076.8	tail-protein	MAVEDEYTRLLKRLLPPGPAWEGNNPLLEGLAPSLARVHAQSSALMREIDPGAAVQLLDRYEALCGLPDECTIEETQTLSQRQRRLAAKVNGYGGINEAFYRRQLDALGYRSVSITQYQNEAENPRPDIATDDDYRYLWQVNIPTLATIDVMTCTSSCVGSLRTWGDTVIECVINKVSPSHTEVVFAYTE*	hallmark_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0005	cloud	direct	high	572	0.998	GCA_013425995.1_02166
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2288955	2290358	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	3312	4715	GCA_013425995_1_1_2081	GCA_013425995_1_1_2081	-	4315383	.	PFAM:PF04865.13	Baseplate-J-like-protein	MADSGFSRPDLPNLIATIRSDLLTRFETDVVLRRLDAEVYSRVMAAAVHTLYGYLDYLARNMLPDLADEEWLSRHGNLKQVPRKQPTTAGGYARWESVSSGITLPAGTEMQTDEQKQYVTTADATVNDEGVLRALIEAVDAGTGGNLDDKTPLRLMTPVAGLSSTCYAESVEGGTDLETLEDWRSRIMARWYYTPQGGADADYRIWATDVAGITRAWVFRHHAGRGTVGVMPANSDLDNPVPDETLIDAVKQYILPLAPVAGSGLFVFPPTLRKIDFEIALAKDTPAIRAAVTKEIKSALFRDGEPSGKIYLSRISEAISLATDQFAHRLISPAKDVELGTYELPVIGEITWSNYNESDVEIDVALSSFSPNPVTLPDSPDAFATATFTPENLPSLDGVNITWDFVPAGEGEPDPSTLCVITPSADNSGVKATGLAPGTVHVRVTVEYKGKTATDNSYLDIEEVTWL*	hallmark_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0006	cloud	direct	high	1403	0.999	GCA_013425995.1_02167
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2290351	2290767	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	4708	5124	GCA_013425995_1_1_2082	GCA_013425995_1_1_2082	-	4315383	.	COG4381	Mu-like prophage protein gp46  [Mobilome: prophages, transposons]. 	MIIFVNGLLKESTDYFDDLTRSVIISLFSWRRAEADDDTEVPFGWWGDTYPSVGNDRIGSRLYLLQRSKLTNATATRAKDYARQALAWMEEDGVAARVDVAATRTGINSLQLEVTVWQQDGSKHAIIFDDIWQEVLNG*	mmseqs_cdd	nonviral_gene	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0007	cloud	direct	high	416	0.998	GCA_013425995.1_02168
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2290771	2291355	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	5128	5712	GCA_013425995_1_1_2083	GCA_013425995_1_1_2083	-	4315383	.	CDD:TIGR01644	phage-baseplate-assembly-protein-V	MGIKQAISNLAARAVLAALDSSRKCQAAGLKLIAGDTKENVEYIEPYGFTSTAHAGAEAVVLFPSGDRSHGVVISVSDRRYRLKGLKSGEVAVYTDEGDSIVLKRGRVTEITTSELVVNAESKISLNAPQLVVNASSGVSFTTPTITTSGDFSAAGEVSDGVGTMSAIRTTYNGHKHTAQGETAETTGPSASMG*	common_virus_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0008	cloud	direct	high	584	0.998	GCA_013425995.1_02169
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2291355	2292413	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	5712	6770	GCA_013425995_1_1_2084	GCA_013425995_1_1_2084	-	4315383	.	PDB:1WRU_A	Tail-protein	MNNTVFLRVNGREWGGWTSVRISAGVDRAARDFNVEITRQWPGATESTPQIKNGDAVEVRIGDDLVLTGWIEATPVRYDARSLSMAIVGRSKTGDLIDCTATPAQHSGATLAEIAASLAAPFKVNVIDAGAPTTALIDAQPQHGETVIDCLYRLLGQVQALVYDNEKGELVLGVVGSAKAATALVLGENILSCDTERSIKDRFSEYLVTGQRPGTDDDFGEATIAAIKQKSGDSAITRYRPYTIQQSGAATSATCKARCEFEQAQRAAKTRETTYTVQGWRQGNGALWAPNMKVIVYDPFCGFDNEELIIGEVTFIKGDQGTTTELRVAPADAYLPEPAAAKTKKAKKEIVF*	hallmark_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0009	cloud	direct	high	1058	0.999	GCA_013425995.1_02170
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2292410	2293729	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	6767	8086	GCA_013425995_1_1_2085	GCA_013425995_1_1_2085	-	4315383	.	COG4228	Mu-like prophage DNA circulation protein  [Mobilome: prophages, transposons]. 	MAFETGWRARLQSASFRGVPFEVESDEGIFGRRVQVHEYPNRDKPFTEDLGRAARRITINAYLIGDDYPEKRDRLIAAIETEGAATLVHPYYGEMKGNVDGQVRVTHSNQEGRMCRVSFQFVESGELTFPTSGTATDASLDSSAGSLADAISGAFSAFSLDGLSDFVQSGVLADAAEMFDVIADAFTMVDSGISAAMRLVQGDLSVILMPPSSANDFVRNLQKAWRAGTRLTGDASDLVTMVKTISGVTVDSGLAPRGVWSSDSGTTASRKAQTKLVASTMRVVSISEAARAVAQIPSPPGNSALQGGANSVSDIVNISHPALDSQSATTARATPATWDDLTDIRTALNAAIDSEQARTTDDAVFMALTRLRADLNKDISSRLAQVEKTVSRIPSESLPAVVLAAQWFDDASRETDILYRNNIAHPGFVPVVPLRVPVR*	mmseqs_cdd	nonviral_gene	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0010	cloud	direct	high	1319	0.999	GCA_013425995.1_02171
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2293765	2295690	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	8122	10047	GCA_013425995_1_1_2086	GCA_013425995_1_1_2086	-	4315383	.	PFAM:PF10145.8	minor-tail-protein	MADSFELKAIISAVDRLSAPLKGMQRQLKGFQKELSGLTVGAGVAGSAILGAIAGASKEAMGLENNMADARKAIEELHDPKAFQKMTNDIVDMSTRLPMAAEGIAEIVAEAGNAGIPFNELTRFAEDATKAAVGFGMTAADAGHQLAVWRTSFKLTQDEVMTLSDQMNYLAMTGPTTEKKIGAVVTSVGNLATTAGVSTRDLAAIAATITGVGVDADVAGTGVQNFMLALTNANTGNAKAVLKAIGLTSEEVAKGMQKDSRGMMLRVLEGLSHVSKDKQAKGLEWLFGRESIKAIAPLLTNLDLLRKNFNAVSDASKYAGATQREYDSRIHTTEKQLQILKNQFTAMAITVGNEFLPMIVKAVDALKPFMKQGLEFIRQNPETVKSVAKLGAALLGVAAATGAVSRAIKIMNFAMNMSPAKAAIGLLVFGAYEIIEHWDEVGPVIKEVWQEIDNVVQKMGGWETAIKSMAALAALYIGVRFIANIRTAIGMQDGLTAAVGRTATAMKGIGTISLLAGLLELGQYAQKLEKEHPWLIKNFAADSLNSGFGLNDKMDKWGKQFHDFVYDKTGWQMPRADGYFSGQGYSPSVPLDRPVGGRSQSELTVTFENAPPGMRVIDPKSGDPFMSVKTDVAYSPFRNPR*	hallmark_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0011	cloud	direct	high	1925	0.999	GCA_013425995.1_02172
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2295778	2296104	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	10135	10461	GCA_013425995_1_1_2087	GCA_013425995_1_1_2087	-	4315383	.	pfam10109	Phage tail assembly chaperone proteins, E, or 41 or 14. This is family of various Myoviridae bacteriophage tail assembly chaperone, or TAC, proteins.	MIKEITLSQPVMAHGEKLHVLELRPPRFDEVEALGFPFNVGADGAMKIDSAVALKYIPALAGIPRSSAEKLALRDVFMISMHIMGFFTSSETEADSAGDSTTSRTSGE*	mmseqs_cdd	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0012	cloud	direct	high	326	0.997	GCA_013425995.1_02173
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2296101	2296457	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	10458	10814	GCA_013425995_1_1_2088	GCA_013425995_1_1_2088	-	4315383	.	PFAM:PF10618.8	Tail-tube-protein	MGKIAGTCYIKVDGLQLSATGGVEVPMNTRLKEDVIALDGSVDYKETHRAPYTKLTAKVPKGFPRDKLISSENMTVTSELANGDVYVLSNAWVNGEMNHNPEDGTVDIEFHGQEGFYQ*	hallmark_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0013	cloud	direct	high	356	0.997	GCA_013425995.1_02174
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2296450	2298291	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	10807	12648	GCA_013425995_1_1_2089	GCA_013425995_1_1_2089	-	4315383	.	PDB:5LI4_E	tail-component	MSVSFDSIPSNIRVPLFYAEMDNSKANTAQTSAPALLIGQALEDAAIERNKLVLMPTDDQARKLCGQGSPLARMVDAYRKTDPFGELYVIAVSDPKGAPAVGEVTFSGSANASGAVSLYIGAKRIAGAVTSGDSALDAAQSLADAINADPDLPVLASATAVTSDVKITGLTVAPTLTVKTGESAGVDVTILPDNATNKTLSWESDDTAIATVDDNGTVTGIAEGAANVTATTTDGSGLSGVCAVTVEQGEVRSAKRSLKKATSARAAAEVIGAKVTLTAKYSGEAGNQIPLMLNYYGAISGEEIPDGLTVSLSAMQDGAGVISLDNVIAAMGDEPFDFIGLPYNDAATLKQMGEEMNDSSGRWSWSRQLYGHVYTAKIGTLTDLAAFGEALNDPHLTIAGYEPKTQTAPEELLASRLGRQAVFIRNDPARPTQTGEITGALPAPVGERFSMTERQSLLTHGIASSTVNSGTLLIERDITTYQKNKFGVADNSYLDSETLHTSAYVLRKLKSVITTKYPRHKLANDGTRFGPGQAIVTPSVLRGEICAAYREMELAGIVENFDVFKKYLIVERNADDPNRVDVLFPPDYVNQLRVFALKNQFRLQYSNEEMANG*	hallmark_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0014	cloud	direct	high	1841	0.999	GCA_013425995.1_02175
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2298281	2298445	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	12638	12802	GCA_013425995_1_1_2090	GCA_013425995_1_1_2090	-	4315383	.	pfam10948	Protein of unknown function (DUF2635). This is a family of phage proteins with unknown function.	MFVIPVKGRKVPDPLRGDVLPEKGRNVEKNSYWLRRLRDGDVKETSQKRRLNVC*	mmseqs_cdd	nonviral_gene	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0015	cloud	direct	high	164	0.994	GCA_013425995.1_02176
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2298451	2299011	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	12808	13368	GCA_013425995_1_1_2091	GCA_013425995_1_1_2091	-	4315383	.	PDB:2GJV_C	tail-completion-protein	MKLSLIIEALRSRAPSFKSRVAGAAEFQALESNAKMMLPAAYVIPTGDTVSRQESQTDYYQVVNEGFAVVVVLDNRRDLRGQTAAFDAVDSIRAEIFGAILGWEPDDCTHQITYDGGQVVEMNRAALYYQFDFTAEREITDIDTRHHRDLDELVPLETVAVDVDFIDPGNGPDGDIEHHDEIHFTE*	hallmark_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0016	cloud	direct	high	560	0.998	GCA_013425995.1_02177
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2299008	2299526	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	13365	13883	GCA_013425995_1_1_2092	GCA_013425995_1_1_2092	-	4315383	.	PDB:2KZ4_A	Head-tail-adaptor	MADSPLFHVDYDVPEQMEFKRPVMRRAFVKIGQVHMRDTRRLVMKRGTSKPGENPGYKTGRLARSIGYYVPRASKNRSGMMVRIAPNQKRGEGNRRIEGDFYPAFLFYGVRRGAKRQRSHHKGKSGGSGWKVAPRNNYMTEVLARRKAWTRYTLQRALRKALRPPKVRRVRA*	hallmark_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0017	cloud	direct	high	518	0.998	GCA_013425995.1_02178
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2299519	2299914	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	13876	14271	GCA_013425995_1_1_2093	GCA_013425995_1_1_2093	-	4315383	.	PDB:2KZ4_A	Head-tail-adaptor	MKRSPSQTATRYSFPDPGELNRRVQFRKRVDSPAADFGTESEEIDTFRAWARVQQTGATTYQSSVQTGEAVTHLITIRYRSGMSSEWQIVLPGGEVLRVRRIRDLNSERRFLLLECESLGDADHYSGAVYG*	hallmark_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0018	cloud	direct	high	395	0.997	GCA_013425995.1_02179
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2299911	2300228	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	14268	14585	GCA_013425995_1_1_2094	GCA_013425995_1_1_2094	-	4315383	.	PFAM:3JVO_G	Head-Tail-Connector-protein	MILSLSEIKAQLRIEEDFTEEDALLTLLGGAAEARTSNYLNRRLYATEVPDTDEDGLVVSDDIRQAMLMLCSHFYENRSSTSDVEMTEMPQSFKWLVDAYRFIPL*	hallmark_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0019	cloud	direct	high	317	0.997	GCA_013425995.1_02180
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2300263	2300529	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	14620	14886	GCA_013425995_1_1_2095	GCA_013425995_1_1_2095	-	4315383	.	PFAM:PF16461.4	tail-tube-protein	MTLDPTALSVAVGATSPIKASVTPENATNKALNWTSGDEAIATVDASGVVTGVAEGGPVDVTATAADGSGVSASCAVTVTAEKRTKSK*	common_virus_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0020	.	unmatched_CDS	none	0	0	.
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2300535	2301755	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	14892	16112	GCA_013425995_1_1_2096	GCA_013425995_1_1_2096	-	4315383	.	CDD:TIGR01554	phage-major-capsid-protein,-HK97-family	MKLHEMQQKRATIAAEMRALNEKIGDASWTEEQRSQWDNAKHEYDKLDAAIKREEELRAMDNILAAENEPEHRNNPEGSEDERRAAVFDKFVRHGLGELSTEEKRTLKEFRAQGIDDGEGGGSKGGFTVPKQFRNRVVEAMKAYGGIAGVCQILSTSNGQDIDWTYSDGTADMGVMLGENEEASEGDVTFEPITIGAKKMTSKIIRVSNELLLDSGIDMNGYLAARIAQRLGRGEAAQIVNGDGTGKNVKGLAKWVTKTTSAAAADAFTWEELLALKHSVDPAYRNSPKFRFAFNDNTLLKISSMKDAQGRPLWLPDVVGMAPATVLNVPYVIDQAIADIGAGKQFVYCGDFDRFILRRVAYMTLMRLTERYAEFDQVGFLAFHRFDCALEDAAAVKALIGKEEAK*	hallmark_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0021	cloud	direct	high	1220	0.999	GCA_013425995.1_02181
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2301825	2302448	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	16182	16805	GCA_013425995_1_1_2097	GCA_013425995_1_1_2097	-	4315383	.	CDD:COG3740	head-maturation-protease	MSDIEKRCYVGEVRAAEVEGEPTKIIGYASVFNSRSELIFGSFREVIKPGAFDDVLGDDVRALFNHDPNFILGRSSAGTLSLSVDDRGLRYEITAPQTQTIRDLVLAPMQRGDISQSSFAFRVARDGERWYQDEDGVVVREITRFSRLLDVSPVTYPAYQEADSAVRSLEQWRSQQAEQDQRSAEARQKQTTEKAARERVLDLLARP*	hallmark_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0022	cloud	direct	high	623	0.998	GCA_013425995.1_02182
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2302441	2303682	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	16798	18039	GCA_013425995_1_1_2098	GCA_013425995_1_1_2098	-	4315383	.	PDB:8CEZ_K	Portal-Protein	MFLDAFFRSDPNAEPGNPENPATPLTGENIATTSGMISDVFVSPETAMKLAAVYSCIYVLSSNLAQMPLHVLRREGKTVRQATEHPVFYLVHDEPNPWETSYKWRELMQRHVLGWGNAYTEIKRNRRGEVIELAHRMPWESCLIKFDGRWRYGIYTEEGSWSVHPDDMVHIKAIGNCDKWGLSPIMQHAQTIGLGLSGQKYTESFFNGNARPAGIVSVKQELNDKSWNRLKKIWQKAAAALRSQENKTLLLPAELDYKALTISPVDAQLVEMMKLNRSMIAGIFNVPAHMINDLEKATFSNISEQSIQFVRFTIMPWVVNWEQELNRRLFTRQELAAGHYVKFNLAGLLRGTPKERAEFYHYAITDGWLSRNEVRALEDKNPVPGLDEMLVSVNAAQTSGSKDKTPEGNPDNE*	hallmark_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0023	cloud	direct	high	1241	0.999	GCA_013425995.1_02183
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2303682	2303831	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	18039	18188	GCA_013425995_1_1_2099	GCA_013425995_1_1_2099	-	4315383	.	.	hypothetical protein	MKLYDVFGVVGFCLLISACYLRWGTAPAMAVAGGGLLLNGLAMARKRGR*	.	hypothetical_protein	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0024	cloud	direct	high	149	0.993	GCA_013425995.1_02184
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2303828	2305555	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	18185	19912	GCA_013425995_1_1_2100	GCA_013425995_1_1_2100	-	4315383	.	PFAM:PF03354.14	Large-Terminase	MATYPNVNDANRYARDVVAGKILACRYVKLACQRHLNDLERAKDQRWPYRFDRDKAERFCRFSQKMPHTSGEWARKKLRLTLEDWQKFCFCVSFGWVRKSDGLRRFQEIYIEVPRKNGKSLIAASVGIYMFCADDEHGAEVYCGATTEKQAFKVFEPARQMVQKLPALRKRFSIKPWAKKMTRPDGSVFAPIVGDPGDGDSPSCAIIDEYHEHATDALYTTMTTGQGAREQPLTLIITTAGYDIASPCYDKRSQVVEILEGIRTDGANETIFGIIYTLDKDDDWTSEEAIRKANPNLGVSLKPEFLRAKQELAKTTPSQTNKILTKHFNLWVSSKAAFYNMQRWQEAADPSLTLADFEGEPCYLGIDLASKLDLNAVVPVFMREIDGLKHFYCIGAQFWVPEDTVYSTDPQLKRTAERYQSFVNQGVLIPTDGAEVDYRVIFESILRLRDKVKIEICPIDPYGATSLAHMLNDEGLNPVTITQNFTNMSDPMREIEAALAAGRFHHDGNPILTWCIQNVVGKYYAGSDDVVRPTKEGNENKIDGAVAMMMGVGRAMLNEPGDFLSNLDDEDILTL*	hallmark_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0025	cloud	direct	high	1727	0.999	GCA_013425995.1_02185
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2305559	2305987	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	19916	20344	GCA_013425995_1_1_2101	GCA_013425995_1_1_2101	-	4315383	.	CDD:COG3747	Small-Terminase	MAGVRAAGGGRKKNLPVSGKSSITNIRPPQELMSAVAVKVWKSTSKILIERGLFEPEDAPVLMAYCNAFHLMIEAEKMIATSGIIATGESGIKKHPAINVRNDAVAQIARLGSLLGLDPMSRARMLGAGTPDDEEGNEFDEF*	hallmark_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0026	cloud	direct	high	428	0.998	GCA_013425995.1_02186
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2306153	2306512	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	20510	20869	GCA_013425995_1_1_2102	GCA_013425995_1_1_2102	-	4315383	.	PDB:5H0M_A	HNH-endonuclease	MPPRIPKACRKRGCGKSTTDRSGYCEEHKGAGWERHNKGRSAAQRGYGAEWRKVRNLVIKRDKGLCQICRREGVIRPGSSVDHIIAKAHGGTDDPSNLECICSEHHKAKTARERLSMMR*	common_virus_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0027	.	unmatched_CDS	none	0	0	.
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2307127	2307384	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	21484	21741	GCA_013425995_1_1_2103	GCA_013425995_1_1_2103	+	4315383	.	pfam10798	Biofilm development protein YmgB/AriR. YmgB is part of the three gene cluster ymgABC which has a role in biofilm development and stability. YmgB represses biofilm formation in rich medium containing glucose, decreases cellular motility and also protects the cell from acid which indicates that YmgB has an important function in acid-resistance. YmgB binds as a dimer to genes which are important for biofilm formation via a ligand. Due to its important function in acid resistance it is also known as AriR (regulator of acid resistance influenced by indole).	MAPSVSADSQLVDYFAANGDQYLCEKVIISEIRLELTAKKNSVTNKDIILALIYRLQVEHNEVKKDILRNALEIVVQRTPDDIQS*	mmseqs_cdd	nonviral_gene	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0028	cloud	direct	high	257	0.996	GCA_013425995.1_02187
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2307982	2308221	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	22339	22578	GCA_013425995_1_1_2104	GCA_013425995_1_1_2104	+	4315383	.	PF10796.9	Sigma-S stabilisation anti-adaptor protein	MLITIGKGGSFEEMIESVKQAINAALDSEDNSFKSETTVLLTQFNALLSIAASLDKKDPELDVSGLLKLTSSLSSDKGL*	hhsuite_tools	hypothetical_protein	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0029	.	unmatched_CDS	none	0	0	.
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2308228	2308479	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	22585	22836	GCA_013425995_1_1_2105	GCA_013425995_1_1_2105	-	4315383	.	.	hypothetical protein	MNDVMLFGESWNGEILTIANRARAIHHIPIKHETRTVTFFITTYISDSGIPYLIGISELEPSQEDIAKAIVIYSPRGTSFPKY*	.	hypothetical_protein	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0030	.	unmatched_CDS	none	0	0	.
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2309017	2309367	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	23374	23724	GCA_013425995_1_1_2106	GCA_013425995_1_1_2106	-	4315383	.	PFAM:PF10828.7	Rz-like-spanin	MKVIGKFVIYVLLFMLTGLLSWRAGWNAHSDYVNAMAARKKAKAEDMIRSSEIKAARNSHEGKIVYHVINRDVIKYVQSPNRTVCKFDNDAVQLRQRAIDAANSLSGFDGAPMQSK*	phrogs_hmm	hypothetical_protein	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0031	cloud	direct	high	350	0.997	GCA_013425995.1_02188
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2309367	2309855	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	23724	24212	GCA_013425995_1_1_2107	GCA_013425995_1_1_2107	-	4315383	.	CDD:cd16900	endolysin-R21-like-protein	MMSPALKQRIVAAMSGGAIAIATAMVAGKDGLEGREYVPYRDVVGVLTVCDGHTGKDIIPGKRYTDAECDALTQADMTHIARQIDPHIKVNTTDTQRAAIYSFAYNVGPSAAIKSTLMKKLNDGDYVGACNELKRWIYAGGKKWRGLMSRREVEHQVCMWDR*	common_virus_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0032	cloud	direct	high	488	0.998	GCA_013425995.1_02189
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2309852	2310067	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	24209	24424	GCA_013425995_1_1_2108	GCA_013425995_1_1_2108	-	4315383	.	pfam04971	Bacteriophage P21 holin S. Phage_holin_2_1 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Members of this family fall into the holin superfamily II, and Phage 21 S holin is the prototype for this superfamily. It has two transmembrane segments with both the N- and C-termini on the cytoplasmic side of the inner membrane in E. coli. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the build up of a holin oligomer which causes the lysis.	MYQMDKLTTGIAYGTSVGNAGFWVLQLLDKVSPSQWAAIGVLGSLVFGFLTFLTNLYFKIKEDRRKAARGE*	mmseqs_cdd	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0033	cloud	direct	high	215	0.995	GCA_013425995.1_02190
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2310557	2310790	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	24914	25147	GCA_013425995_1_1_2109	GCA_013425995_1_1_2109	-	4315383	.	.	hypothetical protein	MALVFIPALIVLLTAKEKKLGRELTQEEVETLRDNAVGMVMPDEIALEMNESRGYPDVDPENVWHDWLSYKNSFDVQ*	.	hypothetical_protein	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0034	cloud	direct	high	233	0.996	GCA_013425995.1_02191
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2310925	2311620	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	25282	25977	GCA_013425995_1_1_2110	GCA_013425995_1_1_2110	-	4315383	.	pfam06323	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Phage 82 gene Q encodes a phage-specific positive regulator of late gene expression, thought, by analogy to the corresponding gene of phage lambda, to be a transcription antiterminator.	MIAQDYEYIRQQLITATADLSGSTKGQLVAFAENAQLATNRYKRKRLKVRDEETGKMITLHNPPVPGVQSQSKSSSIALVLPVEYATASWRRAVLALDEAECAWLLWCYSENIRYAHQVEIVRWGWETFSEELKGQRIAGKTLERLRALVWLAAQDVKRELRNEPQGCYRAQELAQMVGVTKSTWSEGYAARWAQMRANFLYLDKRAVIDAAKTRSKQKVANCKQVIANPN*	mmseqs_cdd	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0035	cloud	direct	high	695	0.999	GCA_013425995.1_02192
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2311617	2311979	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	25974	26336	GCA_013425995_1_1_2111	GCA_013425995_1_1_2111	-	4315383	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MTNTYEFTLPYPPSVNDYWRRGNGITYINKKGREYRRAVQEILHILKLDINTSARLRLRIIANMPDKRRRDIDNILKAVCDSLEKGGFMQNDSQIDELKVVRGEVIPGGRLGIKVTEIEE*	common_virus_hmm	common_virus	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0036	cloud	direct	high	362	0.997	GCA_013425995.1_02193
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2311976	2312260	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	26333	26617	GCA_013425995_1_1_2112	GCA_013425995_1_1_2112	-	4315383	.	PFAM:PF07102.11	HNH-endonuclease	MKSIYRSAKWLAAVRQLDCCVLCRRWGVQAAHRNEDKGMGLKADDSLTAALCVDCHHAIDNGSELTREERRALMDRAIVLTLRELTRRGLVAPK*	phrogs_hmm	hypothetical_protein	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0037	cloud	direct	high	284	0.996	GCA_013425995.1_02194
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2312263	2312463	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	26620	26820	GCA_013425995_1_1_2113	GCA_013425995_1_1_2113	-	4315383	.	.	hypothetical protein	MRMGWFEHSDCTAEEADELLRQYRKRGIQAERSLSADCKTFVVRVLLPESKYPPRQDTTFQQRMWR*	.	hypothetical_protein	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0038	cloud	direct	high	200	0.995	GCA_013425995.1_02195
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2312466	2312921	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	26823	27278	GCA_013425995_1_1_2114	GCA_013425995_1_1_2114	-	4315383	.	PFAM:PF05772.11	NinB/-Orf-homologous-recombination-mediator	MNFPKDGIRLHKSNFASIGQQLQPLLANGDCYRLIIRPWRETRSLSQNALAHMWFAEISDYLIKRGKSFASPVWVKDALKHSYLGYERREMTDVITGEKTIISSLRHTSDLDTGEMHFFLSQVEAWALSIGCRLTIPEDCEYAQLRAEQEA*	phrogs_hmm	nonviral_gene	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0039	cloud	direct	high	455	0.998	GCA_013425995.1_02196
GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote	cenote	CDS	2312918	2313028	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C92	27275	27385	GCA_013425995_1_1_2115	GCA_013425995_1_1_2115	-	4315383	.	.	hypothetical protein	MAHINLVLAFPDTLAPGTPETGSFLCPAFDLYGGAA*	.	hypothetical_protein	C92	27385	2285644	2313029	GCA_013425995.1|CP059045.1@region_2285645_2313029@tool_cenote_CDS_0040	cloud	ambiguous	low	5	0.045	GCA_013425995.1_02196
GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote	cenote	tRNA	1153904	1153980	GCA_013425995.1	CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995.1_CP059045.1	GCA_013425995.1|CP059045.1	GCA_013425995_1_1	GCA_013425995_1_1@C48	1290	1366	tRNA-Arg	tRNA-Arg	+	4315383	.	tRNAscan-SE score: 82.7	Arg	NA	tRNAscan-SE	.	C48	9998	1152615	1162613	GCA_013425995.1|CP059045.1@region_1152616_1162613@tool_cenote_tRNA_0001	.	.	.	.	.	.