core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	genomad_gene	genomad_length	genomad_strand	genomad_gc_content	genomad_genetic_code	genomad_rbs_motif	genomad_marker	genomad_evalue	genomad_bitscore	genomad_uscg	genomad_plasmid_hallmark	genomad_virus_hallmark	genomad_taxid	genomad_taxname	genomad_annotation_conjscan	genomad_annotation_amr	genomad_annotation_accessions	genomad_annotation_description	genomad_element_name_std	genomad_element_name_orig	genomad_element_gene_wrt_to_contig	genomad_element_gene_wrt_to_element	genomad_element_gene_start	genomad_element_gene_end	genomad_protein_translation	genomad_phage_region_id	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	genomad	CDS	459560	460726	GCA_013488045.1	CP054134.1	GCA_013488045.1|CP054134.1	GCA_013488045.1_CP054134.1	GCA_013488045.1|CP054134.1|provirus_459560_470052_410	1167	-1	0.383	11	AGGAG				0	0	0	1						GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	GCA_013488045.1|CP054134.1	410	1	1	1167	MKITQHTKKDGSAVYRSSIYLGIDSVTGKKVKTTISARTKKELRNKATQAKVEFEKNGSTRKQRSHITTYSELVDLFWQTYQHTIKTNTQIKIKGCLKNYLLPSFSTYKLDKLTPVIIQTQVNKWADEYNQDGTGYKEYNHLHALNKRILQYGVSIQALDNNPARDIVIPRKITRDKQEIKYFQDQELKNFLSYLDNLENTFVNFYDTVLYKMLLATGLRIRECLALEWSDIDLQNGTIDINKTLNILNQVNTPKTKSSYRVLDIDHKTVLMLRLYRARQAENGRNIGLTYEKVFSDSFDNYVNTRKVDYRLHKHLKSANCTDLGFHAFRHTHASILLNAGLPYKEIQTRLGHAKISVTMDTYSHLSKENQKRAVSFFETALEKINSS	GCA_013488045.1|CP054134.1|provirus_459560_470052	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad_CDS_0001	cloud	indirect	.	.	.	GCA_008726415.1_00131
GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	genomad	CDS	461076	462047	GCA_013488045.1	CP054134.1	GCA_013488045.1|CP054134.1	GCA_013488045.1_CP054134.1	GCA_013488045.1|CP054134.1|provirus_459560_470052_411	972	-1	0.297	11	GGA/GAG/AGG				0	0	0	1						GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	GCA_013488045.1|CP054134.1	411	2	1517	2488	MKPFADETKQIDILKSRKLDFLDENKAKKVLKRYGYYEIVNGYKMFLLDDDNTKERYKLGATFEHLTSLYELDKSIRNGVIQASLEIELSLRTAIAYTLAEDFGVEERQYLYYRNFRQGDTTWSNDHPTNERAILLNKLNHILSRNIEPLNHYRNNHGHIPPWILLKESTFGNLKYIFKLLKGPQKDKVISICYGIEISDVTDDLKALFKDTLSVVNSFRNRSAHSGRIFNFKSSIHKIGYNRTFHNKINITEAHYRRGLGQSDLYTLSKILSYFENGMAKINLDFYISYPIKKHCENYKEDLELLANEMNYPLDELKQELEK	GCA_013488045.1|CP054134.1|provirus_459560_470052	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad_CDS_0002	cloud	indirect	.	.	.	GCA_000193735.2_00968
GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	genomad	CDS	462234	462503	GCA_013488045.1	CP054134.1	GCA_013488045.1|CP054134.1	GCA_013488045.1_CP054134.1	GCA_013488045.1|CP054134.1|provirus_459560_470052_412	270	-1	0.400	11	AGGAG	GENOMAD.154436.VV	2.196e-45	158	0	0	0	1246	Caudoviricetes			PF13783		GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	GCA_013488045.1|CP054134.1	412	3	2675	2944	MGFFDTVKQEGSFSTASGVNGLHYVVLQVTLKEKFFGTGSGNLTELEDVINKQASKGYRLHTITTANGGSKGLGGGDRIQATMVFEKII	GCA_013488045.1|CP054134.1|provirus_459560_470052	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad_CDS_0003	cloud	indirect	.	.	.	GCA_019929665.1_01770
GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	genomad	CDS	462543	463064	GCA_013488045.1	CP054134.1	GCA_013488045.1|CP054134.1	GCA_013488045.1_CP054134.1	GCA_013488045.1|CP054134.1|provirus_459560_470052_413	522	-1	0.301	11	GGA/GAG/AGG				0	0	0	1						GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	GCA_013488045.1|CP054134.1	413	4	2984	3505	MNRLKELRKRDKITQVAFAKDNGIPLRTLQSWENGESQIKPEKAQQLADIFGVSVGYLLGFNIDDVTEDEINFHNNVMEKMNKEAFVRFLDFITLSDIVLSDKQIEMIFYQLQDLSELNSDYRYTETDVEKLKSMYSVKLNYMPTEGLIKRSNILYKEDAIEEQFEQYKKIID	GCA_013488045.1|CP054134.1|provirus_459560_470052	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad_CDS_0004	cloud	indirect	.	.	.	GCA_003943215.1_00268
GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	genomad	CDS	463265	463462	GCA_013488045.1	CP054134.1	GCA_013488045.1|CP054134.1	GCA_013488045.1_CP054134.1	GCA_013488045.1|CP054134.1|provirus_459560_470052_414	198	1	0.354	11	AGGAG				0	0	0	1						GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	GCA_013488045.1|CP054134.1	414	5	3706	3903	MKNNMRLLLAKQRKKTADVAEATGISKSTLTALYYERAKNPSIDTLKKVSSYLGVTLDEFLDTKE	GCA_013488045.1|CP054134.1|provirus_459560_470052	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad_CDS_0005	cloud	indirect	.	.	.	GCA_000192275.1_02101
GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	genomad	CDS	463692	464297	GCA_013488045.1	CP054134.1	GCA_013488045.1|CP054134.1	GCA_013488045.1_CP054134.1	GCA_013488045.1|CP054134.1|provirus_459560_470052_415	606	1	0.396	11	AGGAG	GENOMAD.205814.VP	1.07e-107	344	0	0	0	1246	Caudoviricetes			COG3646;TIGR02681	Phage regulatory protein Rha	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	GCA_013488045.1|CP054134.1	415	6	4133	4738	MELVYMDGKKEPYTTSEIIAECAEVQHHTITRLVRDNKADFEALGILGFKIHKLDKRGQPKKIYLLNEQQATLLITYLKNTEPVRQFKMNLVKAFFEMRDELSKRYLQRELEKPKRKTLTEAIKSWEKAPKHAYSTLTNLLLKGATGKNKAQLMQERESKNGIDGLTSVELTNYQRLEDMAIAMINLNRGYSEIKELIFKA	GCA_013488045.1|CP054134.1|provirus_459560_470052	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad_CDS_0006	cloud	indirect	.	.	.	GCA_902460385.1_02016
GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	genomad	CDS	464309	464569	GCA_013488045.1	CP054134.1	GCA_013488045.1|CP054134.1	GCA_013488045.1_CP054134.1	GCA_013488045.1|CP054134.1|provirus_459560_470052_416	261	1	0.360	11	AGGAG	GENOMAD.081064.VV	6.256e-49	168	0	0	0	1246	Caudoviricetes					GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	GCA_013488045.1|CP054134.1	416	7	4750	5010	MENEFKTVTNAKGLEIPKYSKDFKKLVEKDRQLAEYLCMNYENLYSEDLGAFLETVEQGFSWILDLIESKDLLYKPKSGSNHAKRK	GCA_013488045.1|CP054134.1|provirus_459560_470052	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad_CDS_0007	cloud	indirect	.	.	.	GCA_902460345.1_01723
GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	genomad	CDS	464906	465100	GCA_013488045.1	CP054134.1	GCA_013488045.1|CP054134.1	GCA_013488045.1_CP054134.1	GCA_013488045.1|CP054134.1|provirus_459560_470052_417	195	1	0.354	11	GGAG/GAGG	GENOMAD.072874.VV	7.548e-29	109	0	0	0	1246	Caudoviricetes					GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	GCA_013488045.1|CP054134.1	417	8	5347	5541	MTLDNMTQSEFDNRITEIKDRNPNLFQFIIDFLDDKVTPEEVYDFLKMERSYQVNYIKNYKARA	GCA_013488045.1|CP054134.1|provirus_459560_470052	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad_CDS_0008	shell	indirect	.	.	.	GCA_001657905.1_00014
GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	genomad	CDS	465102	465311	GCA_013488045.1	CP054134.1	GCA_013488045.1|CP054134.1	GCA_013488045.1_CP054134.1	GCA_013488045.1|CP054134.1|provirus_459560_470052_418	210	1	0.443	11	GGAG/GAGG	GENOMAD.068563.VV	1.271e-33	123	0	0	0	1246	Caudoviricetes					GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	GCA_013488045.1|CP054134.1	418	9	5543	5752	MNELELSNTQSIVFTLLLLGLLLYLNHRDRKKSARIERESAQTIETTSEELSPYYGRYIQLAGVKPWGY	GCA_013488045.1|CP054134.1|provirus_459560_470052	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad_CDS_0009	cloud	indirect	.	.	.	GCA_000212835.1_01635
GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	genomad	CDS	465265	465585	GCA_013488045.1	CP054134.1	GCA_013488045.1|CP054134.1	GCA_013488045.1_CP054134.1	GCA_013488045.1|CP054134.1|provirus_459560_470052_419	321	1	0.374	11	4Base/6BMM	GENOMAD.167683.VP	5.107e-29	112	0	0	0	1246	Caudoviricetes			PF09035;COG3311;TIGR01764	Predicted DNA-binding transcriptional regulator AlpA	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	GCA_013488045.1|CP054134.1	419	10	5706	6026	MGDIFSLQGLSHGGTKMFEKMIEDLKSKILEAVERYLKSHDKVPQKRLDLISKVELKEELGIGDKTLIKWEGAGLPQYIPPIEDTRKAYYKISDVLKFLGVDDGKD	GCA_013488045.1|CP054134.1|provirus_459560_470052	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad_CDS_0010	cloud	indirect	.	.	.	GCA_003943285.1_01538
GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	genomad	CDS	465572	466462	GCA_013488045.1	CP054134.1	GCA_013488045.1|CP054134.1	GCA_013488045.1_CP054134.1	GCA_013488045.1|CP054134.1|provirus_459560_470052_420	891	1	0.328	11	GGxGG	GENOMAD.189730.VP	1.518e-14	77	0	0	1	1246	Caudoviricetes			PF14297;TIGR01714;K02315	phage replisome organizer, putative, N-terminal region	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	GCA_013488045.1|CP054134.1	420	11	6013	6903	MAKTKVYFWLKIDKKFFDNLFIKRLKSMPGGYTMTVIYMRMMLESLESDCILYYEGYFETLKEELALKLDVSEDDISMTIAYFTQCGLIQIDEDKNAELTQAKALVQQETNHAAYMRSYRKEQQEKENNLTLLSNNFTTLSTCKTEKEIDKEKELEQDLKLDINKEYIVEGTSPNEQSSSFTFPTWLEETAIKDLEKTKHKELWIPIVYLNQVANKRYKFVDKTKRLLLARFKEGYTLEDFKQVIDIKTAEWKDSPEFSKYLRPETLFGSKFDGYLNQKPKIIKRKSEDNFPDLPF	GCA_013488045.1|CP054134.1|provirus_459560_470052	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad_CDS_0011	shell	indirect	.	.	.	GCA_003049525.1_01756
GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	genomad	CDS	466474	467319	GCA_013488045.1	CP054134.1	GCA_013488045.1|CP054134.1	GCA_013488045.1_CP054134.1	GCA_013488045.1|CP054134.1|provirus_459560_470052_421	846	1	0.381	11	AGGAG				0	0	0	1						GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	GCA_013488045.1|CP054134.1	421	12	6915	7760	MKEQFKEFNNRKILDKVCDIHQVNYWEISVPVLGGSERKLQAFCPECVKGEIKQKEKELLQQFEDRQAYFKTYDVLMRDSTIPNELKGATFENFFVKTTEERQMLEFVKGQAQKYLAGMTGNTLISGSTGIGKSHLSLALAKEINESFRAKHEPKSVLFVSLTEIIKQIKEGWAYGRNANLTEYEAVKKLVDVDFLIIDDLGAKNGTVTPKSDWEQDFLFDIINNRETTIFNTNLDSSELRTVYNARNSSRILKGLEGNTFKAFTIKDKRYTINTVRGEYQ	GCA_013488045.1|CP054134.1|provirus_459560_470052	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad_CDS_0012	cloud	indirect	.	.	.	GCA_000234035.1_01886
GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	genomad	CDS	467316	467477	GCA_013488045.1	CP054134.1	GCA_013488045.1|CP054134.1	GCA_013488045.1_CP054134.1	GCA_013488045.1|CP054134.1|provirus_459560_470052_422	162	1	0.278	11	GGAG/GAGG	GENOMAD.096366.VV	1.485e-24	96	0	0	0	1246	Caudoviricetes			PF13128	Phage-like element PBSX protein XtrA	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	GCA_013488045.1|CP054134.1	422	13	7757	7918	MNDDKMRFATEKGFVVYEKCGIIEIEKIPSFGEITLFYSDGKFTHLVKKETKK	GCA_013488045.1|CP054134.1|provirus_459560_470052	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad_CDS_0013	cloud	indirect	.	.	.	GCA_000344275.1_00947
GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	genomad	CDS	467567	467689	GCA_013488045.1	CP054134.1	GCA_013488045.1|CP054134.1	GCA_013488045.1_CP054134.1	GCA_013488045.1|CP054134.1|provirus_459560_470052_423	123	1	0.325	11	AGxAGG/AGGxGG	GENOMAD.110684.VV	2.926e-19	80	0	0	0	1246	Caudoviricetes					GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	GCA_013488045.1|CP054134.1	423	14	8008	8130	MSGDTSLGYVVANKFSMDPDKRQKIFSQCKKEDESLEQRK	GCA_013488045.1|CP054134.1|provirus_459560_470052	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad_CDS_0014	shell	indirect	.	.	.	GCA_015560245.1_01420
GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	genomad	CDS	467847	468707	GCA_013488045.1	CP054134.1	GCA_013488045.1|CP054134.1	GCA_013488045.1_CP054134.1	GCA_013488045.1|CP054134.1|provirus_459560_470052_424	861	1	0.324	11	AGGAG	GENOMAD.012613.VV	1.456e-23	104	0	0	1	1246	Caudoviricetes			PF05065;TIGR01554;COG4653	phage major capsid protein, HK97 family	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	GCA_013488045.1|CP054134.1	424	15	8288	9148	MTTNLVKQKENLEAYIRSTGYNTRGMNVENNHILIEKPILDSYEDEHQRKELVDLVNVIETRTRGGKYEVTDFESDSLQEVSENSVERTEADKKKTISVDYLVKLFSGKLDFSQEQLDDGQYNLTDFLGKKIIKLKRRTRNREIGKILQTAKVQTATSMDDLKSIVSLINPERNVSMVVSQSLFSVLEKMKDTSGNYLLKVDKETGTSETFFVDNFLIVDDTTLGNKGDKKGFIGDLENFVTLFDRKKDTLSWVNANDYFGKRLILHTRFDVKKVEEDCGYFIQWN	GCA_013488045.1|CP054134.1|provirus_459560_470052	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad_CDS_0015	shell	indirect	.	.	.	GCA_000159495.1_02853
GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	genomad	CDS	468717	469265	GCA_013488045.1	CP054134.1	GCA_013488045.1|CP054134.1	GCA_013488045.1_CP054134.1	GCA_013488045.1|CP054134.1|provirus_459560_470052_425	549	1	0.322	11	AGGAG	GENOMAD.109051.VV	8.54e-101	323	0	0	0	1246	Caudoviricetes					GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	GCA_013488045.1|CP054134.1	425	16	9158	9706	MDINQVFDTLDDLDNKKSKIYSAREQLSEKRKSLLGNQAVSFENIDSFLSNNLESLEKLEKMEKAINSLQEKYNRDFSEAKAVIFEYIFKETKQRMETKKIYKQYRKKLRQILDAYDEIQELKKDVEEIHTGVVREISQKHSLSLYRTEVSPLTVLPFLNPDISGWMNFSKEYRDIKVYLEK	GCA_013488045.1|CP054134.1|provirus_459560_470052	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad_CDS_0016	shell	indirect	.	.	.	GCA_002096445.1_01425
GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	genomad	CDS	469642	470052	GCA_013488045.1	CP054134.1	GCA_013488045.1|CP054134.1	GCA_013488045.1_CP054134.1	GCA_013488045.1|CP054134.1|provirus_459560_470052_426	411	1	0.348	11	GGAGG	GENOMAD.054988.VV	3.599e-79	258	0	0	0	1246	Caudoviricetes			PF05263;TIGR01636	phage transcriptional activator, RinA family	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad	GCA_013488045.1|CP054134.1	426	17	10083	10493	MYELSNRDLDGIDIELGRYRTLANKIYLRRQELIHNKKHSTEDYTGGKGKTVSSPTEATIIRIEEDQTLRYLEGFKLVVDTLMENLIESDLVIFKMRYLEAGATWEDVAEKLNKTTRYINSRRKVIAKRFVELKGY	GCA_013488045.1|CP054134.1|provirus_459560_470052	GCA_013488045.1|CP054134.1@region_459560_470052@tool_genomad_CDS_0017	shell	indirect	.	.	.	GCA_000722845.1_01697