core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	7316	7918	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	1	603	GCA_014645875_1_11_10	GCA_014645875_1_11_10	-	63197	.	.	hypothetical protein	MPRFNSNVTSKKRKKNVHIEIVNKDFLPTRNEFKIDRVEKQLKDSPDSEIVFFNDSIIFSKQNTNLKFTNFISNEKQQYQINAISHFSSDISMIKSIEANTVNYNERMLSIISLYLKEDVQKIMGLMKSDIKSLLDLQEGLRVYWYYDLEDKEIKIVCIDPQHLVLPSKHNGMSKEEMMIKTFNAVTNSKKHCISQYFIN*	.	hypothetical_protein	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0001	cloud	direct	high	602	0.998	GCA_014645875.1_01804
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	7911	8420	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	596	1105	GCA_014645875_1_11_11	GCA_014645875_1_11_11	-	63197	.	COG3600	Uncharacterized phage-associated protein  [Mobilome: prophages, transposons]. 	MTEKKHLTTVENIIALMKEEIENISPLRLQKTLYFLFAYYGASYGQLSKSKEYKVTQNESLNLPEYLFDAQFEAWQYGPVIRDVYVSNKYSLDYNDIDFSMSNFEIEDKTMQQEITEYLREIIKSTLKISDFGLVERSHEDKEWKNNITHQEVMNNDLIIKEYIGLVNA*	mmseqs_cdd	nonviral_gene	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0002	cloud	direct	high	509	0.998	GCA_014645875.1_01805
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	9813	10076	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	2498	2761	GCA_014645875_1_11_12	GCA_014645875_1_11_12	-	63197	.	.	hypothetical protein	MAKALMLIITIVCIAYIVYNFIKDKPVINIFFALIIQSTLLFLIRFFWIKQSFSKSLLSSFDLFSITFVVIYLIYKLRKRRKEKEDK*	.	hypothetical_protein	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0003	shell	direct	high	263	0.996	GCA_014645875.1_01806
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	10253	10429	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	2938	3114	GCA_014645875_1_11_13	GCA_014645875_1_11_13	+	63197	.	.	hypothetical protein	MKYRLIAVVIFAIIVLIATFYIQPMLNTDNQLINLVYVVFLFVVGAILGYIGRRLDSK*	.	hypothetical_protein	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0004	shell	direct	high	176	0.994	GCA_014645875.1_01807
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	11224	11454	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	3909	4139	GCA_014645875_1_11_14	GCA_014645875_1_11_14	-	63197	.	.	hypothetical protein	MKTITKILDALTYICVGLLFLKYAVMSANMMFDWHLRWYFLEDIPHMALILFIMMFVFAVPSEMIKDKLKKEKKQV*	.	hypothetical_protein	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0005	shell	direct	high	230	0.996	GCA_014645875.1_01808
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	12231	12659	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	4916	5344	GCA_014645875_1_11_15	GCA_014645875_1_11_15	-	63197	.	PFAM:PF03592.15	Terminase-small-subunit	MKSLTLKQKQFADEYIRTGNAYQSAVNAGYSVSYARGNAIKLLENVSINQYIDDNLEIIQKESIAEADEIMRYLTRVLRAEEKEEILVYVGEGMQEIQTIQPSAKDRIKAAELLGKRYRMWTDKHEIEVTAPIFIDDVPEED*	hallmark_hmm	common_virus	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0006	shell	direct	high	428	0.998	GCA_014645875.1_01809
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	12685	12924	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	5370	5609	GCA_014645875_1_11_16	GCA_014645875_1_11_16	-	63197	.	PFAM:PF03592.15	Terminase-small-subunit	MKKLTTKQRRFAEEYIETGNPYYSAIKVGYSEVYARDNALKLLENISVKSYIHERLEEIKNDNMTEKYGVMRYLTRLIK*	hallmark_hmm	common_virus	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0007	shell	direct	high	239	0.996	GCA_014645875.1_01810
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	12979	13500	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	5664	6185	GCA_014645875_1_11_17	GCA_014645875_1_11_17	-	63197	.	PFAM:PF09979.8	head-maturation-protease	MKTLKQIEVHKKNIESYQKDIQALEQEVNNEKEKIDQLNKDYQELVVSDQVEKADKLYTKIDKQETTHKAKVKRLSVMKQSLKQVIIKNCSSMQEEADKLSDEYIDIYYDDLKHYNKLKEELKQAEQKLEEYNNSYLLKQRNLSHYIDRLIRENNIQPTEYMGTVNSHKPFYI*	phrogs_hmm	hypothetical_protein	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0008	shell	direct	high	521	0.998	GCA_014645875.1_01811
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	13512	13745	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	6197	6430	GCA_014645875_1_11_18	GCA_014645875_1_11_18	-	63197	.	.	hypothetical protein	MNNDEMNKLSEALELSESQRLALYSYSERQAKEKAQSQEQKKELSSLEKHEKRQQIMSIKDTNQRQEEIAKHVELFK*	.	hypothetical_protein	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0009	shell	direct	high	233	0.996	GCA_014645875.1_01812
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	13735	14577	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	6420	7262	GCA_014645875_1_11_19	GCA_014645875_1_11_19	-	63197	.	PFAM:PF05263.10	spore-coat-protein	MASLKQAYQPETDTEDIEMVSDYTLFTLYNPKFIEKKAENIREGIETLYERNKPHMASDNITGILYYESVNIEHLAIQIIEEKEKLESYLKKSNRNLYHLYVVLDTYTDEERTLLMNYIKHAKVRDNELVRRFKIDLYNYVQAEREKRQEEHNKKSFNAYLVDKDEVRKRQQKKKINNGYGLTLNQEKELRLIKEHEAERNTDMGIFIDLIQQMNNDELLSYVLDRHEFNIDSYNLKILTDAALYRLPLKQRKQAYNHLKAIARTLINNPIEKRLKRYEQ*	phrogs_hmm	hypothetical_protein	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0010	shell	direct	high	842	0.999	GCA_014645875.1_01813
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	14631	15428	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	7316	8113	GCA_014645875_1_11_20	GCA_014645875_1_11_20	-	63197	.	PDB:4M4W_K	Replicative-helicase	MKSINDIDLKSKMRSELIEEQYNLKCDKCKNIYSYHKFRKSDGTIQIIRNGCECESIEKGKQSRSQHKANQKRLNIEKVFKQSMMNDDLLKAEFDNYKPTNKNLLETKQILQKYVANFKPDKPKSLLLQGSYGIGKSHLAMSVVREVKKKGYTALFLDVTELVKAYRNTYNKNVAMTEKELDQMIRDVDLLVIDDYGTTVNDYGNEKLFSLTDMRTGKSNIITTNREALELSNNDDKAKRFSRLMKNTQIIKMHGTDYRLKDFKA*	rep_hall_hmm	common_virus	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0011	shell	direct	high	797	0.999	GCA_014645875.1_01814
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	15441	16199	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	8126	8884	GCA_014645875_1_11_21	GCA_014645875_1_11_21	-	63197	.	PFAM:PF06926.10	replisome-organiser-protein	MEQPSYYAILTASVRYDNRLTDSEKILYAEITALSNKYGYCSASNNYFDKLYEVSKRTISTRINNLKKLNYLKIELELNGKEVKKRKMYPMTHTSIPIEDNFHRGVENMVHTPIEANFQENITSNNITRLNNTSSSSASTTKQQPPSHSYSNVFNFYQENGFGILQPFVIDQINAWIDDFNGNENIVIEALKEAATNNVCKWSYANSILKSWYQDGIKSIDDIEARRKQRETSKNKTESTKTFDNSQYADLF*	rep_hall_hmm	common_virus	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0012	cloud	direct	high	758	0.999	GCA_014645875.1_01815
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	16235	16459	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	8920	9144	GCA_014645875_1_11_22	GCA_014645875_1_11_22	-	63197	.	PFAM:PF04492.12	DnaD-like-helicase-loader	MTNKIKCSKGYGVITQSVMSSKDISIEAKALYCYYMAHVGDNFIPSATQTCNDLMISYKRFKTLRTQLFERGFL*	phrogs_hmm	hypothetical_protein	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0013	shell	direct	high	224	0.996	GCA_014645875.1_01816
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	16513	16764	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	9198	9449	GCA_014645875_1_11_23	GCA_014645875_1_11_23	-	63197	.	.	hypothetical protein	MKLFKKKYDHKKVNKVKDMILYTSYSFEAKAYEEAIELLKDNNKQKAIELMYERLIEAQRKEYEMKLEIEKASSVHASQRRNR*	.	hypothetical_protein	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0014	shell	direct	high	251	0.996	GCA_014645875.1_01817
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	17114	17383	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	9799	10068	GCA_014645875_1_11_24	GCA_014645875_1_11_24	-	63197	.	PFAM:PF10013.8	excisionase-and-transcriptional-regulator	MAEQQPILSESASLELANGILKLAEQIAQRKIEQQQKRWATQTELRKLYRCTHSDITEWERLGLTKRKQGRSYYYDLKEVEEFLLSQKK*	phrogs_hmm	hypothetical_protein	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0015	shell	direct	high	269	0.996	GCA_014645875.1_01819
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	17417	17617	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	10102	10302	GCA_014645875_1_11_25	GCA_014645875_1_11_25	-	63197	.	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain  [Transcription]. 	MENKVKGYRCSLGLTQKKMADILGMSTNSYASKENGKSDFKVKEINKFINFMKKNNIIVDKEIFLQ*	mmseqs_cdd	nonviral_gene	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0016	cloud	direct	high	200	0.995	GCA_014645875.1_01820
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	17742	18347	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	10427	11032	GCA_014645875_1_11_26	GCA_014645875_1_11_26	+	63197	.	PFAM:PF13744.5	transcriptional-repressor	MKSAKEVGQTIKLIRIGKKLSQKDFSKKIETTVSALSNWENGRNYPKDDYLINISNIFNVPLDIFKYSTKERVTEIVNSLEKRVNENDNYKILYSPKVKNEIIEKATLITDKQQENYNGLLNFSTKQDILNTLNDLIIDENITIGYNFENDNEVFNFIDTELRNFTSKNIKLLISKNANHDLVAKIENELYNAIDNIDKLR*	phrogs_hmm	hypothetical_protein	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0017	cloud	direct	high	605	0.998	GCA_014645875.1_01821
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	18448	18681	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	11133	11366	GCA_014645875_1_11_27	GCA_014645875_1_11_27	+	63197	.	.	hypothetical protein	MYFNDWKVTINGKGSHDVVTNEDTLLILQDYQHVEIALKLVNDTIQVKSLGYGEDVSINPTTKEITVNVTNLLEDDE*	.	hypothetical_protein	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0018	shell	direct	high	233	0.996	GCA_014645875.1_01822
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	18703	19176	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	11388	11861	GCA_014645875_1_11_28	GCA_014645875_1_11_28	+	63197	.	.	hypothetical protein	MELKLTDKEANDLLFLSKEILERYNIKLEENCKGEINITSPKVPTKFILNYFIRPGKATLNFRETQYNTCLLRINLNDGFHKNSNNDIVRGNRINIFSEKEYKNKNDLSTHMVAYPLPYKIFEDSSDFVKQLFSVLRYTNTNHNDKIYIETKFQLGW*	.	hypothetical_protein	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0019	cloud	direct	high	473	0.998	GCA_014645875.1_01823
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	19181	19972	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	11866	12657	GCA_014645875_1_11_29	GCA_014645875_1_11_29	+	63197	.	PF08862.10	Domain of unknown function DUF1829	MNDNEIKSISEDYFNYLKKESKFVPLENESIEFYSPIVDYFGDSISVNISNNIDNYLLTDYGETLWNLEQLGIDLTSHKKQKKYQFLKNIIESNNLVLENKKIQQYIDRKKLPQAIHDYVLAISEISNLAILKKDNIKSLFRDEVIQYFLKNRETYPNVFIEFKVEGKSKLTHNFEAVFPGKTTEYVKTIKQINKNSAKNLLFDWEDVEEYRSKMYDSNARLNIITENEDEISDSVATMLSRYNVEVLPFDDKRKIKRKFSNL*	hhsuite_tools	nonviral_gene	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0020	cloud	direct	high	791	0.999	GCA_014645875.1_01824
GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote	cenote	CDS	20113	21249	GCA_014645875.1	BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875.1_BMMO01000011.1	GCA_014645875.1|BMMO01000011.1	GCA_014645875_1_11	GCA_014645875_1_11@C1	12798	13934	GCA_014645875_1_11_30	GCA_014645875_1_11_30	+	63197	.	PDB:1Z19_B	Integrase	MIKKYKKKDGSTAYMFVAYLGVDPITRKQKRTTRRGFKTEREAKIAEAKLQTEIQSKGFLNTDITTFKQVYELWIEQYKCTVRESTFVRVSNMFKIKILKEFDNMPIQSITTPYCQKVINYWIENYKDFRNIKVYAANVFEYAVMLKIIHENPFKYTKLPKRTRNKSNEHLTYYSSDELKQFLELIKDDLMYYAMFRLLGFTGMRRGELMALTWEDINFKNKTISIDKTVTIGLNSKEIIQPPKTHSSIRVISIDDRTLSILKNWRVEQRKLCLMHGHNTSNKSQCLFTNLRTNKRLQVQHPNKAMDKICKKYNFKKIKIHGFRHTHCSLLFEAGLSIQEVQDRLGHGDINTTMDVYAHITEKQREKVAEKFANYISF*	common_virus_hmm	common_virus	C1	13934	7316	21250	GCA_014645875.1|BMMO01000011.1@region_7317_21250@tool_cenote_CDS_0021	shell	direct	high	1136	0.999	GCA_014645875.1_01825